@string{KJvanVliet = "van Vliet, Krystyn J."}
@article { balsera97,
- author = {MBalsera #" and "# SStepaniants #" and "# SIzrailev #" and "#
- YOono #" and "# KSchulten},
+ author = MBalsera #" and "# SStepaniants #" and "# SIzrailev #" and "#
+ YOono #" and "# KSchulten,
title = "Reconstructing potential energy functions from simulated force-
induced unbinding processes.",
year = 1997,
}
@article { baneyx02,
- author = {GBaneyx #" and "# LBaugh #" and "# VVogel},
+ author = GBaneyx #" and "# LBaugh #" and "# VVogel,
title = "{Supramolecular Chemistry And Self-assembly Special Feature:
Fibronectin extension and unfolding within cell matrix fibrils
controlled by cytoskeletal tension}",
}
@article { basche01,
- author = {TBasche #" and "# SNie #" and "# JMFernandez},
+ author = TBasche #" and "# SNie #" and "# JMFernandez,
title = "{Single molecules}",
year = 2001,
journal = PNAS,
}
@article { bechhoefer02,
- author = {JBechhoefer #" and "# SWilson},
+ author = JBechhoefer #" and "# SWilson,
title = "Faster, cheaper, safer optical tweezers for the undergraduate
laboratory",
collaboration = "",
}
@article { bell78,
- author = "GIBell",
+ author = GIBell,
title = "Models for the specific adhesion of cells to cells.",
year = 1978,
month = may,
}
@article { best02,
- author = {RBBest #" and "# SBFowler #" and "# JLToca-Herrera #" and "#
- JClarke},
+ author = RBBest #" and "# SBFowler #" and "# JLToca-Herrera #" and "#
+ JClarke,
title = "{A simple method for probing the mechanical unfolding pathway of
proteins in detail}",
year = 2002,
}
@article { braverman08,
- author = {EBraverman #" and "# RMamdani},
+ author = EBraverman #" and "# RMamdani,
title = "Continuous versus pulse harvesting for population models in
constant and variable environment.",
year = 2008,
}
@article { brockwell02,
- author = {DJBrockwell #" and "# GSBeddard #" and "# JClarkson #" and "#
+ author = DJBrockwell #" and "# GSBeddard #" and "# JClarkson #" and "#
RCZinober #" and "# AWBlake #" and "# JTrinick #" and "# PDOlmsted #"
- and "# DASmith #" and "# SERadford},
+ and "# DASmith #" and "# SERadford,
title = "The effect of core destabilization on the mechanical resistance of
{I27}.",
year = 2002,
}
@article { brower-toland02,
- author = {BDBrower-Toland #" and "# CLSmith #" and "# RCYeh #" and "# JTLis
- #" and "# CLPeterson #" and "# MDWang},
+ author = BDBrower-Toland #" and "# CLSmith #" and "# RCYeh #" and "# JTLis
+ #" and "# CLPeterson #" and "# MDWang,
title = "{From the Cover: Mechanical disruption of individual nucleosomes
reveals a reversible multistage release of DNA}",
year = 2002,
}
@article { bryngelson87,
- author = {JDBryngelson #" and "# PGWolynes},
+ author = JDBryngelson #" and "# PGWolynes,
title = "Spin glasses and the statistical mechanics of protein folding.",
year = 1987,
month = nov,
}
@article { bryngelson95,
- author = {JDBryngelson #" and "# JNOnuchic #" and "# NDSocci #" and "#
- PGWolynes},
+ author = JDBryngelson #" and "# JNOnuchic #" and "# NDSocci #" and "#
+ PGWolynes,
title = "Funnels, pathways, and the energy landscape of protein folding: a
synthesis.",
year = 1995,
}
@article { bullard06,
- author = {BBullard #" and "# TGarcia #" and "# VBenes #" and "# MCLeake #"
- and "# WALinke #" and "# AFOberhauser},
+ author = BBullard #" and "# TGarcia #" and "# VBenes #" and "# MCLeake #"
+ and "# WALinke #" and "# AFOberhauser,
title = "{The molecular elasticity of the insect flight muscle proteins
projectin and kettin}",
year = 2006,
}
@article { bustamante94,
- author = {CBustamante #" and "# JFMarko #" and "# EDSiggia #" and "#
- SSmith},
+ author = CBustamante #" and "# JFMarko #" and "# EDSiggia #" and "#
+ SSmith,
title = "Entropic elasticity of lambda-phage {DNA}.",
year = 1994,
month = sep,
}
@article { bustanji03,
- author = {YBustanji #" and "# CRArciola #" and "# MConti #" and "#
- EMandello #" and "# LMontanaro #" and "# BSamori},
+ author = YBustanji #" and "# CRArciola #" and "# MConti #" and "#
+ EMandello #" and "# LMontanaro #" and "# BSamori,
title = "{Dynamics of the interaction between a fibronectin molecule and a
living bacterium under mechanical force}",
year = 2003,
}
@article { cao07,
- author = {YCao #" and "# MMBalamurali #" and "# DSharma #" and "# HLi},
+ author = YCao #" and "# MMBalamurali #" and "# DSharma #" and "# HLi,
title = "{A functional single-molecule binding assay via force
spectroscopy}",
year = 2007,
}
@article { carl01,
- author = {PCarl #" and "# CHKwok #" and "# GManderson #" and "# DWSpeicher
- #" and "# DEDischer},
+ author = PCarl #" and "# CHKwok #" and "# GManderson #" and "# DWSpeicher
+ #" and "# DEDischer,
title = "{Forced unfolding modulated by disulfide bonds in the Ig domains
of a cell adhesion molecule}",
year = 2001,
}
@article { carrion-vazquez99a,
- author = {MCarrion-Vazquez #" and "# AFOberhauser #" and "# SBFowler #" and
+ author = MCarrion-Vazquez #" and "# AFOberhauser #" and "# SBFowler #" and
"# PEMarszalek #" and "# SEBroedel #" and "# JClarke #" and "#
- JMFernandez},
+ JMFernandez,
title = "Mechanical and chemical unfolding of a single protein: A
comparison",
year = 1999,
}
@article { carrion-vazquez99b,
- author = {MCarrion-Vazquez #" and "# PEMarszalek #" and "# AFOberhauser #"
- and "# JMFernandez},
+ author = MCarrion-Vazquez #" and "# PEMarszalek #" and "# AFOberhauser #"
+ and "# JMFernandez,
title = "Atomic force microscopy captures length phenotypes in single
proteins",
year = 1999,
}
@book { cowan98,
- author = "GCowan",
+ author = GCowan,
title = "Statistical Data Analysis",
year = 1998,
publisher = OUP,
}
@article { craig01,
- author = {DCraig #" and "# AKrammer #" and "# KSchulten #" and "# VVogel},
+ author = DCraig #" and "# AKrammer #" and "# KSchulten #" and "# VVogel,
title = "{Comparison of the early stages of forced unfolding for
fibronectin type III modules}",
year = 2001,
}
@article { dietz04,
- author = {HDietz #" and "# MRief},
+ author = HDietz #" and "# MRief,
title = "{Exploring the energy landscape of GFP by single-molecule
mechanical experiments}",
year = 2004,
}
@article { dietz06a,
- author = {HDietz #" and "# FBerkemeier #" and "# MBertz #" and "# MRief},
+ author = HDietz #" and "# FBerkemeier #" and "# MBertz #" and "# MRief,
title = "{Anisotropic deformation response of single protein molecules}",
year = 2006,
journal = PNAS,
}
@article { dietz06b,
- author = {HDietz #" and "# MRief},
+ author = HDietz #" and "# MRief,
title = "{Protein structure by mechanical triangulation}",
year = 2006,
journal = PNAS,
}
@article { dietz07,
- author = {HDietz #" and "# MRief},
+ author = HDietz #" and "# MRief,
title = "Detecting Molecular Fingerprints in Single Molecule Force
Spectroscopy Using Pattern Recognition",
year = 2007,
}
@article { discher06,
- author = {DEDischer #" and "# NBhasin #" and "# CPJohnson},
+ author = DEDischer #" and "# NBhasin #" and "# CPJohnson,
title = "{Covalent chemistry on distended proteins}",
year = 2006,
journal = PNAS,
}
@article { dudko03,
- author = {OKDudko #" and "# AEFilippov #" and "# JKlafter #" and "#
- MUrbakh},
+ author = OKDudko #" and "# AEFilippov #" and "# JKlafter #" and "#
+ MUrbakh,
title = "Beyond the conventional description of dynamic force spectroscopy
of adhesion bonds.",
year = 2003,
}
@article { dudko06,
- author = {OKDudko #" and "# GHummer #" and "# ASzabo},
+ author = OKDudko #" and "# GHummer #" and "# ASzabo,
title = "Intrinsic rates and activation free energies from single-molecule
pulling experiments.",
year = 2006,
}
@article { dudko07,
- author = {OKDudko #" and "# JMathe #" and "# ASzabo #" and "# AMeller #"
- and "# GHummer},
+ author = OKDudko #" and "# JMathe #" and "# ASzabo #" and "# AMeller #"
+ and "# GHummer,
title = "Extracting kinetics from single-molecule force spectroscopy:
nanopore unzipping of {DNA} hairpins.",
year = 2007,
}
@article { evans97,
- author = {EEvans #" and "# KRitchie},
+ author = EEvans #" and "# KRitchie,
title = "Dynamic strength of molecular adhesion bonds.",
year = 1997,
month = apr,
}
@article { evans99,
- author = {EEvans #" and "# KRitchie},
+ author = EEvans #" and "# KRitchie,
title = "Strength of a weak bond connecting flexible polymer chains.",
year = 1999,
month = may,
}
@book { galassi05,
- author = {MGalassi #" and "# JDavies #" and "# JTheiler #" and "# BGough #"
- and "# GJungman #" and "# MBooth #" and "# FRossi},
+ author = MGalassi #" and "# JDavies #" and "# JTheiler #" and "# BGough #"
+ and "# GJungman #" and "# MBooth #" and "# FRossi,
title = "{GNU} Scientific Library: Reference Manual",
year = 2005,
edition = "Second Revised",
}
@article { gao03,
- author = {MGao #" and "# DCraig #" and "# OLequin #" and "# IDCampbell #"
- and "# VVogel #" and "# KSchulten},
+ author = MGao #" and "# DCraig #" and "# OLequin #" and "# IDCampbell #"
+ and "# VVogel #" and "# KSchulten,
title = "{Structure and functional significance of mechanically unfolded
fibronectin type III1 intermediates}",
year = 2003,
}
@article { gavrilov01,
- author = {LAGavrilov #" and "# NSGavrilova},
+ author = LAGavrilov #" and "# NSGavrilova,
title = "The reliability theory of aging and longevity.",
year = 2001,
month = dec,
}
@article { gergely00,
- author = {CGergely #" and "# JCVoegel #" and "# PSchaaf #" and "# BSenger
- #" and "# MMaaloum #" and "# JKHHorber #" and "# JHemmerle},
+ author = CGergely #" and "# JCVoegel #" and "# PSchaaf #" and "# BSenger
+ #" and "# MMaaloum #" and "# JKHHorber #" and "# JHemmerle,
title = "{Unbinding process of adsorbed proteins under external stress
studied by atomic force microscopy spectroscopy}",
year = 2000,
}
@article { gompertz25,
- author = "BGompertz",
+ author = BGompertz,
title = "On the Nature of the Function Expressive of the Law of Human
Mortality, and on a New Mode of Determining the Value of Life
Contingencies",
}
@article { grossman05,
- author = {CGrossman #" and "# AStout},
+ author = CGrossman #" and "# AStout,
title = "Optical Tweezers Advanced Lab",
year = 2005,
season = "Fall",
}
@article { hanggi90,
- author = {PHanggi #" and "# PTalkner #" and "# MBorkovec},
+ author = PHanggi #" and "# PTalkner #" and "# MBorkovec,
title = "Reaction-rate theory: fifty years after Kramers",
year = 1990,
month = "Apr",
}
@article { hatfield99,
- author = {JWHatfield #" and "# SRQuake},
+ author = JWHatfield #" and "# SRQuake,
title = "Dynamic Properties of an Extended Polymer in Solution",
year = 1999,
month = "Apr",
}
@article { heymann00,
- author = {BHeymann #" and "# HGrubmuller},
+ author = BHeymann #" and "# HGrubmuller,
title = "Dynamic force spectroscopy of molecular adhesion bonds.",
year = 2000,
month = jun,
}
@article { hummer01,
- author = {GHummer #" and "# ASzabo},
+ author = GHummer #" and "# ASzabo,
title = "{From the Cover: Free energy reconstruction from nonequilibrium
single-molecule pulling experiments}",
year = 2001,
}
@article { hummer03,
- author = {GHummer #" and "# ASzabo},
+ author = GHummer #" and "# ASzabo,
title = "Kinetics from nonequilibrium single-molecule pulling experiments.",
year = 2003,
month = jul,
}
@article { hutter93,
- author = {JLHutter #" and "# JBechhoefer},
+ author = JLHutter #" and "# JBechhoefer,
title = "Calibration of atomic-force microscope tips",
collaboration = "",
year = 1993,
}
@article { hyeon03,
- author = {CHyeon #" and "# DThirumalai},
+ author = CHyeon #" and "# DThirumalai,
title = "Can energy landscape roughness of proteins and {RNA} be measured
by using mechanical unfolding experiments?",
year = 2003,
}
@article { irback05,
- author = {AIrback #" and "# SMitternacht #" and "# SMohanty},
+ author = AIrback #" and "# SMitternacht #" and "# SMohanty,
title = "{Dissecting the mechanical unfolding of ubiquitin}",
year = 2005,
journal = PNAS,
}
@article { izrailev97,
- author = {SIzrailev #" and "# SStepaniants #" and "# MBalsera #" and "#
- YOono #" and "# KSchulten},
+ author = SIzrailev #" and "# SStepaniants #" and "# MBalsera #" and "#
+ YOono #" and "# KSchulten,
title = "Molecular dynamics study of unbinding of the avidin-biotin
complex.",
year = 1997,
}
@article { juckett93,
- author = {DAJuckett #" and "# BRosenberg},
+ author = DAJuckett #" and "# BRosenberg,
title = "Comparison of the Gompertz and Weibull functions as descriptors
for human mortality distributions and their intersections.",
year = 1993,
}
@article { king09,
- author = {WTKing #" and "# GYang},
+ author = WTKing #" and "# GYang,
title = "Effects of Cantilever Stiffness on Unfolding Force in {AFM}
Protein Unfolding",
year = 2009,
}
@article { kleiner07,
- author = {AKleiner #" and "# EShakhnovich},
+ author = AKleiner #" and "# EShakhnovich,
title = "The mechanical unfolding of ubiquitin through all-atom Monte Carlo
simulation with a Go-type potential.",
year = 2007,
}
@article { klimov00,
- author = {DKKlimov #" and "# DThirumalai},
+ author = DKKlimov #" and "# DThirumalai,
title = "{Native topology determines force-induced unfolding pathways in
globular proteins}",
year = 2000,
}
@article { kosztin06,
- author = {IKosztin #" and "# BBarz #" and "# LJanosi},
+ author = IKosztin #" and "# BBarz #" and "# LJanosi,
title = "Calculating potentials of mean force and diffusion coefficients
from nonequilibrium processes without Jarzynski's equality.",
year = 2006,
}
@article { kramers40,
- author = "HAKramers",
+ author = HAKramers,
title = "Brownian motion in a field of force and the diffusion model of
chemical reactions.",
year = 1940,
}
@article { kroy07,
- author = {KKroy #" and "# JGlaser},
+ author = KKroy #" and "# JGlaser,
title = "The glassy wormlike chain",
year = 2007,
journal = NJP,
}
@article { labeit03,
- author = {DLabeit #" and "# KWatanabe #" and "# CWitt #" and "# HFujita #"
+ author = DLabeit #" and "# KWatanabe #" and "# CWitt #" and "# HFujita #"
and "# YWu #" and "# SLahmers #" and "# TFunck #" and "# SLabeit #" and
- "# HGranzier},
+ "# HGranzier,
title = "Calcium-dependent molecular spring elements in the giant protein
titin",
year = 2003,
}
@article { li00,
- author = {HLi #" and "# AFOberhauser #" and "# SBFowler #" and "# JClarke
- #" and "# JMFernandez},
+ author = HLi #" and "# AFOberhauser #" and "# SBFowler #" and "# JClarke
+ #" and "# JMFernandez,
title = "{Atomic force microscopy reveals the mechanical design of a
modular protein}",
year = 2000,
}
@article { li01,
- author = {HLi #" and "# AFOberhauser #" and "# SDRedick #" and "# MCarrion-
- Vazquez #" and "# HPErickson #" and "# JMFernandez},
+ author = HLi #" and "# AFOberhauser #" and "# SDRedick #" and "#
+ MCarrion-Vazquez #" and "# HPErickson #" and "# JMFernandez,
title = "{Multiple conformations of PEVK proteins detected by single-
molecule techniques}",
year = 2001,
}
@article { li06,
- author = {MSLi #" and "# CKHu #" and "# DKKlimov #" and "# DThirumalai},
+ author = MSLi #" and "# CKHu #" and "# DKKlimov #" and "# DThirumalai,
title = "{Multiple stepwise refolding of immunoglobulin domain I27 upon
force quench depends on initial conditions}",
year = 2006,
}
@article { liu03,
- author = {WLiu #" and "# VMontana #" and "# ERChapman #" and "# UMohideen
- #" and "# VParpura},
+ author = WLiu #" and "# VMontana #" and "# ERChapman #" and "# UMohideen
+ #" and "# VParpura,
title = "{Botulinum toxin type B micromechanosensor}",
year = 2003,
journal = PNAS,
}
@article { makarov01,
- author = {DEMakarov #" and "# PKHansma #" and "# HMetiu},
+ author = DEMakarov #" and "# PKHansma #" and "# HMetiu,
title = "Kinetic Monte Carlo simulation of titin unfolding",
collaboration = "",
year = 2001,
}
@article { marko95,
- author = {JFMarko #" and "# EDSiggia},
+ author = JFMarko #" and "# EDSiggia,
title = "Stretching {DNA}",
affiliation = "",
year = 1995,
}
@article { marszalek02,
- author = {PEMarszalek #" and "# HLi #" and "# AFOberhauser #" and "#
- JMFernandez},
+ author = PEMarszalek #" and "# HLi #" and "# AFOberhauser #" and "#
+ JMFernandez,
title = "{Chair-boat transitions in single polysaccharide molecules
observed with force-ramp AFM}",
year = 2002,
}
@article { mello04,
- author = {CCMello #" and "# DBarrick},
+ author = CCMello #" and "# DBarrick,
title = "An experimentally determined protein folding energy landscape.",
year = 2004,
month = sep,
}
@article { mickler07,
- author = {MMickler #" and "# RIDima #" and "# HDietz #" and "# CHyeon #"
- and "# DThirumalai #" and "# MRief},
+ author = MMickler #" and "# RIDima #" and "# HDietz #" and "# CHyeon #"
+ and "# DThirumalai #" and "# MRief,
title = "Revealing the bifurcation in the unfolding pathways of {GFP} by
using single-molecule experiments and simulations",
year = 2007,
}
@article { nevo03,
- author = {RNevo #" and "# CStroh #" and "# FKienberger #" and "# DKaftan #"
+ author = RNevo #" and "# CStroh #" and "# FKienberger #" and "# DKaftan #"
and "# VBrumfeld #" and "# MElbaum #" and "# ZReich #" and "#
- PHinterdorfer},
+ PHinterdorfer,
title = "A molecular switch between alternative conformational states in
the complex of Ran and importin beta1.",
year = 2003,
}
@article { nevo04,
- author = {RNevo #" and "# VBrumfeld #" and "# MElbaum #" and "#
- PHinterdorfer #" and "# ZReich},
+ author = RNevo #" and "# VBrumfeld #" and "# MElbaum #" and "#
+ PHinterdorfer #" and "# ZReich,
title = "Direct discrimination between models of protein activation by
single-molecule force measurements.",
year = 2004,
}
@article { nevo05,
- author = {RNevo #" and "# VBrumfeld #" and "# RKapon #" and "#
- PHinterdorfer #" and "# ZReich},
+ author = RNevo #" and "# VBrumfeld #" and "# RKapon #" and "#
+ PHinterdorfer #" and "# ZReich,
title = "Direct measurement of protein energy landscape roughness.",
year = 2005,
month = may,
}
@article { ng07,
- author = {SPNg #" and "# KSBillings #" and "# TOhashi #" and "# MDAllen #"
+ author = SPNg #" and "# KSBillings #" and "# TOhashi #" and "# MDAllen #"
and "# RBBest #" and "# LGRandles #" and "# HPErickson #" and "#
- JClarke},
+ JClarke,
title = "{Designing an extracellular matrix protein with enhanced
mechanical stability}",
year = 2007,
}
@article { nome07,
- author = {RANome #" and "# JMZhao #" and "# WDHoff #" and "# NFScherer},
+ author = RANome #" and "# JMZhao #" and "# WDHoff #" and "# NFScherer,
title = "Axis-dependent anisotropy in protein unfolding from integrated
nonequilibrium single-molecule experiments, analysis, and simulation",
year = 2007,
}
@article { nummela07,
- author = {JNummela #" and "# IAndricioaei},
+ author = JNummela #" and "# IAndricioaei,
title = "{Exact Low-Force Kinetics from High-Force Single-Molecule
Unfolding Events}",
year = 2007,
}
@article { oberhauser01,
- author = {AFOberhauser #" and "# PKHansma #" and "# MCarrion-Vazquez #" and
- "# JMFernandez},
+ author = AFOberhauser #" and "# PKHansma #" and "# MCarrion-Vazquez #" and
+ "# JMFernandez,
title = "{Stepwise unfolding of titin under force-clamp atomic force
microscopy}",
year = 2001,
}
@article { olshansky97,
- author = {SJOlshansky #" and "# BACarnes},
+ author = SJOlshansky #" and "# BACarnes,
title = "Ever since Gompertz.",
year = 1997,
month = feb,
}
@article { onuchic96,
- author = {JNOnuchic #" and "# NDSocci #" and "# ZLuthey-Schulten #" and "#
- PGWolynes},
+ author = JNOnuchic #" and "# NDSocci #" and "# ZLuthey-Schulten #" and "#
+ PGWolynes,
title = "Protein folding funnels: the nature of the transition state
ensemble.",
year = 1996,
}
@article { opitz03,
- author = {CAOpitz #" and "# MKulke #" and "# MCLeake #" and "# CNeagoe #"
- and "# HHinssen #" and "# RJHajjar #" and "# WALinke},
+ author = CAOpitz #" and "# MKulke #" and "# MCLeake #" and "# CNeagoe #"
+ and "# HHinssen #" and "# RJHajjar #" and "# WALinke,
title = "{Damped elastic recoil of the titin spring in myofibrils of human
myocardium}",
year = 2003,
}
@article { oroudjev02,
- author = {EOroudjev #" and "# JSoares #" and "# SArcidiacono #" and "#
- JBThompson #" and "# SAFossey #" and "# HGHansma},
+ author = EOroudjev #" and "# JSoares #" and "# SArcidiacono #" and "#
+ JBThompson #" and "# SAFossey #" and "# HGHansma,
title = "{Segmented nanofibers of spider dragline silk: Atomic force
microscopy and single-molecule force spectroscopy}",
year = 2002,
}
@article { paci00,
- author = {EPaci #" and "# MKarplus},
+ author = EPaci #" and "# MKarplus,
title = "{Unfolding proteins by external forces and temperature: The
importance of topology and energetics}",
year = 2000,
}
@article { peng08,
- author = {QPeng #" and "# HLi},
+ author = QPeng #" and "# HLi,
title = "{Atomic force microscopy reveals parallel mechanical unfolding
pathways of T4 lysozyme: Evidence for a kinetic partitioning
mechanism}",
}
@book { press92,
- author = {WPress #" and "# STeukolsky #" and "# WVetterling #" and "#
- BFlannery},
+ author = WPress #" and "# STeukolsky #" and "# WVetterling #" and "#
+ BFlannery,
title = "Numerical Recipies in {C}: The Art of Scientific Computing",
year = 1992,
edition = 2,
}
@article { raible04,
- author = {MRaible #" and "# MEvstigneev #" and "# PReimann #" and "#
- FWBartels #" and "# RRos},
+ author = MRaible #" and "# MEvstigneev #" and "# PReimann #" and "#
+ FWBartels #" and "# RRos,
title = "Theoretical analysis of dynamic force spectroscopy experiments on
ligand-receptor complexes.",
year = 2004,
}
@article { raible06,
- author = {MRaible #" and "# MEvstigneev #" and "# FWBartels #" and "#
+ author = MRaible #" and "# MEvstigneev #" and "# FWBartels #" and "#
REckel #" and "# MNguyen-Duong #" and "# RMerkel #" and "# RRos #" and
- "# DAnselmetti #" and "# PReimann},
+ "# DAnselmetti #" and "# PReimann,
title = "Theoretical analysis of single-molecule force spectroscopy
experiments: heterogeneity of chemical bonds.",
year = 2006,
}
@article { rief02,
- author = {MRief #" and "# HGrubmuller},
+ author = MRief #" and "# HGrubmuller,
title = "Force spectroscopy of single biomolecules.",
year = 2002,
month = mar,
}
@book { rief65,
- author = "FRief",
+ author = FRief,
title = "Fundamentals of Statistical and Thermal Physics",
year = 1965,
publisher = McGraw-Hill,
}
@article { rief97,
- author = {MRief #" and "# MGautel #" and "# FOesterhelt #" and "#
- JMFernandez #" and "# HEGaub},
+ author = MRief #" and "# MGautel #" and "# FOesterhelt #" and "#
+ JMFernandez #" and "# HEGaub,
title = "{Reversible Unfolding of Individual Titin Immunoglobulin Domains
by AFM}",
year = 1997,
}
@article { rief98,
- author = {MRief #" and "# JMFernandez #" and "# HEGaub},
+ author = MRief #" and "# JMFernandez #" and "# HEGaub,
title = "Elastically Coupled Two-Level Systems as a Model for Biopolymer
Extensibility",
year = 1998,
}
@article { sarkar04,
- author = {ASarkar #" and "# RBRobertson #" and "# JMFernandez},
+ author = ASarkar #" and "# RBRobertson #" and "# JMFernandez,
title = "{Simultaneous atomic force microscope and fluorescence
measurements of protein unfolding using a calibrated evanescent wave}",
year = 2004,
}
@article { sato05,
- author = {TSato #" and "# MEsaki #" and "# JMFernandez #" and "# TEndo},
+ author = TSato #" and "# MEsaki #" and "# JMFernandez #" and "# TEndo,
title = "{Comparison of the protein-unfolding pathways between
mitochondrial protein import and atomic-force microscopy measurements}",
year = 2005,
}
@article { schlierf04,
- author = {MSchlierf #" and "# HLi #" and "# JMFernandez},
+ author = MSchlierf #" and "# HLi #" and "# JMFernandez,
title = "{The unfolding kinetics of ubiquitin captured with single-molecule
force-clamp techniques}",
year = 2004,
}
@article { schlierf06,
- author = {MSchlierf #" and "# MRief},
+ author = MSchlierf #" and "# MRief,
title = "Single-molecule unfolding force distributions reveal a funnel-
shaped energy landscape.",
year = 2006,
}
@article { schwaiger04,
- author = {ISchwaiger #" and "# AKardinal #" and "# MSchleicher #" and "#
- AANoegel #" and "# MRief},
+ author = ISchwaiger #" and "# AKardinal #" and "# MSchleicher #" and "#
+ AANoegel #" and "# MRief,
title = "A mechanical unfolding intermediate in an actin-crosslinking
protein.",
year = 2004,
}
@article { schwaiger05,
- author = {ISchwaiger #" and "# MSchleicher #" and "# AANoegel #" and "#
- MRief},
+ author = ISchwaiger #" and "# MSchleicher #" and "# AANoegel #" and "#
+ MRief,
title = "The folding pathway of a fast-folding immunoglobulin domain
revealed by single-molecule mechanical experiments.",
year = 2005,
}
@article { sharma07,
- author = {DSharma #" and "# OPerisic #" and "# QPeng #" and "# YCao #" and
- "# CLam #" and "# HLu #" and "# HLi},
+ author = DSharma #" and "# OPerisic #" and "# QPeng #" and "# YCao #" and
+ "# CLam #" and "# HLu #" and "# HLi,
title = "{Single-molecule force spectroscopy reveals a mechanically stable
protein fold and the rational tuning of its mechanical stability}",
year = 2007,
}
@article { sheng05,
- author = {YJSheng #" and "# SJiang #" and "# HKTsao},
+ author = YJSheng #" and "# SJiang #" and "# HKTsao,
title = "Forced Kramers escape in single-molecule pulling experiments",
collaboration = "",
year = 2005,
}
@article { shillcock98,
- author = {JShillcock #" and "# USeifert},
+ author = JShillcock #" and "# USeifert,
title = "Escape from a metastable well under a time-ramped force",
year = 1998,
month = "Jun",
}
@article { socci96,
- author = {NDSocci #" and "# JNOnuchic #" and "# PGWolynes},
+ author = NDSocci #" and "# JNOnuchic #" and "# PGWolynes,
title = "Diffusive dynamics of the reaction coordinate for protein folding
funnels",
collaboration = "",
}
@article { strunz99,
- author = {TStrunz #" and "# KOroszlan #" and "# RSchafer #" and "#
- HJGuntherodt},
+ author = TStrunz #" and "# KOroszlan #" and "# RSchafer #" and "#
+ HJGuntherodt,
title = "{Dynamic force spectroscopy of single DNA molecules}",
year = 1999,
journal = PNAS,
}
@misc { sw:check,
- author = {AMalec #" and "# CPickett #" and "# FHugosson #" and "# RLemmen},
+ author = AMalec #" and "# CPickett #" and "# FHugosson #" and "# RLemmen,
key = "sw:check",
title = "Check",
year = 2006,
}
@misc { sw:noweb,
- author = "NRamsey",
+ author = NRamsey,
key = "sw:noweb",
title = "Noweb",
year = 1997,
}
@misc { sw:python,
- author = {GvanRossum #" and "# others},
+ author = GvanRossum #" and "# others,
key = "sw:python",
title = "Python",
year = 2007,
}
@misc { sw:scipy,
- author = {EJones #" and "# TOliphant #" and "# PPeterson #" and "# others},
+ author = EJones #" and "# TOliphant #" and "# PPeterson #" and "# others,
key = "sw:scipy",
title = "{SciPy}: Open source scientific tools for {Python}",
year = "2001--",
}
@article { szabo80,
- author = {ASzabo #" and "# KSchulten #" and "# ZSchulten},
+ author = ASzabo #" and "# KSchulten #" and "# ZSchulten,
title = "First passage time approach to diffusion controlled reactions",
collaboration = "",
year = 1980,
}
@article { talaga00,
- author = {DSTalaga #" and "# WLLau #" and "# HRoder #" and "# JTang #" and
- "# YJia #" and "# WFDeGrado #" and "# RMHochstrasser},
+ author = DSTalaga #" and "# WLLau #" and "# HRoder #" and "# JTang #" and
+ "# YJia #" and "# WFDeGrado #" and "# RMHochstrasser,
title = "{Dynamics and folding of single two-stranded coiled-coil peptides
studied by fluorescent energy transfer confocal microscopy}",
year = 2000,
}
@article { thirumalai05,
- author = {DThirumalai #" and "# CHyeon},
+ author = DThirumalai #" and "# CHyeon,
title = "{RNA} and Protein Folding: Common Themes and Variations",
affiliation = "Biophysics Program, and Department of Chemistry and
Biochemistry, Institute for Physical Science and Technology, University
}
@article { tlusty98,
- author = {TTlusty #" and "# AMeller #" and "# RBar-Ziv},
+ author = TTlusty #" and "# AMeller #" and "# RBar-Ziv,
title = "Optical Gradient Forces of Strongly Localized Fields",
year = 1998,
month = aug,
}
@book { vanKampen07,
- author = "NGvanKampen",
+ author = NGvanKampen,
title = "Stochastic Processes in Physics and Chemistry",
year = 2007,
edition = 3,
}
@article { walther07,
- author = {KAWalther #" and "# FGrater #" and "# LDougan #" and "# CLBadilla
- #" and "# BJBerne #" and "# JMFernandez},
+ author = KAWalther #" and "# FGrater #" and "# LDougan #" and "# CLBadilla
+ #" and "# BJBerne #" and "# JMFernandez,
title = "{Signatures of hydrophobic collapse in extended proteins captured
with force spectroscopy}",
year = 2007,
}
@article { walton08,
- author = {EBWalton #" and "# SLee #" and "# KJvanVliet},
+ author = EBWalton #" and "# SLee #" and "# KJvanVliet,
title = "Extending Bell's model: how force transducer stiffness alters
measured unbinding forces and kinetics of molecular complexes.",
year = 2008,
}
@article { wiita06,
- author = {APWiita #" and "# SRKAinavarapu #" and "# HHHuang #" and "#
- JMFernandez},
+ author = APWiita #" and "# SRKAinavarapu #" and "# HHHuang #" and "#
+ JMFernandez,
title = "{From the Cover: Force-dependent chemical kinetics of disulfide
bond reduction observed with single-molecule techniques}",
year = 2006,
}
@article { wilcox05,
- author = {AJWilcox #" and "# JChoy #" and "# CBustamante #" and "#
- AMatouschek},
+ author = AJWilcox #" and "# JChoy #" and "# CBustamante #" and "#
+ AMatouschek,
title = "{Effect of protein structure on mitochondrial import}",
year = 2005,
journal = PNAS,
}
@article { wu04,
- author = {JWWu #" and "# WLHung #" and "# CHTsai},
+ author = JWWu #" and "# WLHung #" and "# CHTsai,
title = "Estimation of parameters of the {G}ompertz distribution using the
least squares method.",
year = 2004,
}
@article { yang00,
- author = {GYang #" and "# CCecconi #" and "# WABaase #" and "# IRVetter #"
+ author = GYang #" and "# CCecconi #" and "# WABaase #" and "# IRVetter #"
and "# WABreyer #" and "# JAHaack #" and "# BWMatthews #" and "#
- FWDahlquist #" and "# CBustamante},
+ FWDahlquist #" and "# CBustamante,
title = "{Solid-state synthesis and mechanical unfolding of polymers of T4
lysozyme}",
year = 2000,
}
@article { yang06,
- author = {YYang #" and "# FCLin #" and "# GYang},
+ author = YYang #" and "# FCLin #" and "# GYang,
title = "Temperature control device for single molecule measurements using
the atomic force microscope",
collaboration = "",
}
@article { yu06,
- author = {WYu #" and "# JCLamb #" and "# FHan #" and "# JABirchler},
+ author = WYu #" and "# JCLamb #" and "# FHan #" and "# JABirchler,
title = "{Telomere-mediated chromosomal truncation in maize}",
year = 2006,
journal = PNAS,
}
@article { zhao06,
- author = {JMZhao #" and "# HLee #" and "# RANome #" and "# SMajid #" and "#
- NFScherer #" and "# WDHoff},
+ author = JMZhao #" and "# HLee #" and "# RANome #" and "# SMajid #" and "#
+ NFScherer #" and "# WDHoff,
title = "{Single-molecule detection of structural changes during Per-Arnt-
Sim (PAS) domain activation}",
year = 2006,
}
@article { zhuang06,
- author = {WZhuang #" and "# DAbramavicius #" and "# SMukamel},
+ author = WZhuang #" and "# DAbramavicius #" and "# SMukamel,
title = "{Two-dimensional vibrational optical probes for peptide fast
folding investigation}",
year = 2006,
}
@article { zinober02,
- author = {RCZinober #" and "# DJBrockwell #" and "# GSBeddard #" and "#
- AWBlake #" and "# PDOlmsted #" and "# SERadford #" and "# DASmith},
+ author = RCZinober #" and "# DJBrockwell #" and "# GSBeddard #" and "#
+ AWBlake #" and "# PDOlmsted #" and "# SERadford #" and "# DASmith,
title = "Mechanically unfolding proteins: the effect of unfolding history
and the supramolecular scaffold.",
year = 2002,
projects / sawsim.git / commitdiff