src/root.tex

   1 % Copyright (C)  2010-2013  W.Trevor King <wking@tremily.us>
   2 % Permission is granted to copy, distribute, and/or modify this document
   3 % under the terms of the Creative Commons Attribution-ShareAlike License
   4 % Version 3.0.
   5 %
   6 % You should have revieved a copy of the Creative Commons
   7 % Attribution-ShareAlike License along with this program (COPYING-CC);
   8 % if not, visit
   9 %   http://creativecommons.org/licenses/by-sa/3.0/legalcode
  10
  11 \documentclass[%
  12   subfig,%
  13   indenttoc,%
  14   approvalform,%
  15   final%
  16 %  draft%
  17 ]{drexel-thesis}
  18 % See drexel-thesis.pdf for more options.
  19
  20 %\includeonly{%
  21 %  cantilever/main,%
  22 %  temperature/main%
  23 %  cantilever-calib/main
  24 %}
  25
  26 \author{William Trevor King}
  27 \title{Open source single molecule force spectroscopy}
  28 \DUTmonth{June}
  29 \DUTyear{2013}
  30 \degree{Doctor of Philosophy}
  31 \advisor{Guoliang Yang, Ph.D.}
  32 \advisor{Luis Cruz Cruz, Ph.D.}
  33 \copyrighttext{\copyrighttextCCBYSA}
  34
  35 \input{packages}
  36
  37 \begin{document}
  38
  39 % Work-directory for Asymptote files (no spaces):
  40 \def\asydir{figures/scratch}
  41 \begin{asydef}
  42 // Global Asymptote definitions go here.
  43 //texpreamble("\documentclass{drexel-thesis}");
  44 //usepackage("packages");
  45 defaultpen(fontsize(10));  // match drexel-thesis's default 10pt font size
  46 \end{asydef}
  47
  48
  49 \begin{preamble}
  50
  51 \include{blurb/dedications}
  52 \include{blurb/acknowledgments}
  53
  54 \tableofcontents
  55 \listoftables
  56 \listoffigures
  57
  58 \include{blurb/abstract}
  59
  60 \end{preamble}
  61 \iffinal{}{\linenumbers}
  62
  63 \begin{thesis}
  64 \pdfbookmark[-1]{Mainmatter}{Mainmatter}
  65 \include{introduction/main}
  66 \include{apparatus/main}
  67 \include{sawsim/main}
  68 \include{pyafm/main}
  69 \include{calibcant/main}
  70 \include{hooke/main}
  71 %\include{temperature/main}
  72 %\include{cantilever/main}
  73 \include{salt/main}
  74 \include{future/main}
  75 \end{thesis}
  76
  77 \bibliography{%
  78   blurb/main,%
  79   apparatus/main,%
  80 %  sawsim/main,% currently empty
  81   pyafm/main,%
  82   calibcant/main,%
  83   hooke/main,%
  84   salt/main,%
  85   future/main,%
  86   packaging/main,%
  87   figures/main,%
  88   root}
  89
  90 \appendix
  91 \include{cantilever-calib/main}
  92 %\include{viscocity/main}
  93
  94 \printnomenclature
  95 % avoid index's second column overlapping the nomenclature space.
  96 \iffinal{}{\pagebreak}
  97 %\printindex
  98
  99 \include{blurb/vita}
 100
 101 \end{document}