Merge branch 'namespaced' of git://tremily.us/swc-version-control-git into assembled

* 'namespaced' of git://tremily.us/swc-version-control-git:
  cheat-sheet.md: Fix 'Incorperate' -> 'Incorporate' typo

diff --git a/.gitignore b/.gitignore
new file mode 100644 (file)
index 0000000..629e344
--- /dev/null
+++ b/.gitignore
@@ -0,0 +1,11 @@
+# compiled Jekyll site
+_site
+
+# emacs
+*~
+
+# Python
+*.pyc
+
+# Mac:
+.DS_Store
\ No newline at end of file

diff --git a/.mailmap b/.mailmap
new file mode 100644 (file)
index 0000000..78079fe
--- /dev/null
+++ b/.mailmap
@@ -0,0 +1,7 @@
+Joshua Ryan Smith <joshua.r.smith@gmail.com> <joshua.r.smith@gmail.com>
+Katy Huff <katyhuff@gmail.com> <katyhuff@gmail.com>
+Lynne Williams <williams.lynne99@gmail.com> <alw@Lynne-Williamss-MacBook.local>
+Lynne Williams <williams.lynne99@gmail.com> <williams.lynne99@gmail.com>
+Matt Davis <jiffyclub@gmail.com> <jiffyclub.programatic@gmail.com>
+Matt Davis <jiffyclub@gmail.com> <jiffyclub@gmail.com>
+Sri Hari Krishna Narayanan <sriharikrishna@gmail.com> <snarayan@mcswl169.mcs.anl.gov>

diff --git a/CONTRIBUTING.md b/CONTRIBUTING.md
new file mode 100644 (file)
index 0000000..d830ffc
--- /dev/null
+++ b/CONTRIBUTING.md
@@ -0,0 +1,37 @@
+Contributing Boot Camp Material
+===============================
+
+Licenses
+--------
+
+See http://software-carpentry.org/license.html for the licenses covering
+Software Carpentry material. By contributing you are agreeing that
+Software Carpentry may redistribute your work under these licenses.
+
+Workflow
+--------
+
+Software Carpentry uses a development workflow similar to that of
+[AstroPy][] and many other open source projects. The AstroPy docs have
+excellent sections on:
+
+* [Getting started with git][astropy-git]
+* [Developer workflow][astropy-workflow]
+
+File Formats
+------------
+
+### Text
+
+Text documents should be in [Markdown][] format and compatible
+with [Redcarpet][], the engine GitHub uses to render Markdown.
+
+### Slides
+
+The preferred format for slide presentations is still to be determined.
+
+[AstroPy]: http://astropy.org
+[astropy-git]: http://astropy.readthedocs.org/en/latest/development/workflow/index.html#getting-started-with-git
+[astropy-workflow]: http://astropy.readthedocs.org/en/latest/development/workflow/development_workflow.html
+[Markdown]: http://daringfireball.net/projects/markdown/
+[Redcarpet]: https://github.com/vmg/redcarpet

diff --git a/LICENSE.md b/LICENSE.md
new file mode 100644 (file)
index 0000000..458285e
--- /dev/null
+++ b/LICENSE.md
@@ -0,0 +1,30 @@
+This collection of material is licensed under a Creative Commons - Attribution
+license.
+
+You are free:
+
+- to **Share** - to copy, distribute and transmit the work
+- to **Remix** - to adapt the work
+
+Under the following conditions:
+
+- **Attribution** - You must attribute the work in the manner specified by the
+  author or licensor (but not in any way that suggests that they endorse you or
+  your use of the work).
+
+With the understanding that:
+
+- **Waiver** - Any of the above conditions can be waived if you get permission
+  from the copyright holder.
+- **Other Rights** - In no way are any of the following rights affected by the
+  license:
+  - Your fair dealing or fair use rights;
+  - The author’s moral rights;
+  - Rights other persons may have either in the work itself or in how the work
+    is used, such as publicity or privacy rights.
+- **Notice** - For any reuse or distribution, you must make clear to others the
+  license terms of this work. The best way to do this is with a link to this
+  [web page](http://creativecommons.org/licenses/by/3.0/).
+
+For the full legal text of this license, please see
+http://creativecommons.org/licenses/by/3.0/legalcode.

diff --git a/instructor.md b/instructor.md
new file mode 100644 (file)
index 0000000..f9c27ec
--- /dev/null
+++ b/instructor.md
@@ -0,0 +1,41 @@
+Software Carpentry Boot Camps
+=============================
+
+This repository contains material useful when preparing and running a
+boot camp. This can include lecture notes, lesson plans, IPython
+Notebooks, exercises, and some types of presentations. Please see the
+[contributor guidelines][contrib] for more information on preferred
+file formats and other instructions for contributing.
+
+This repository is also used to store material specific to boot
+camps. Refer to the [wiki][] for instructions on making your own boot
+camp branch and/or making a boot camp website.
+
+Subject choices
+===============
+
+There are many subjects taught in Software Carpentry boot camps,
+mostly culled from the [best practices paper][best-practices].
+branches for some of them.  Possible choices:
+
+version-control
+---------------
+
+* `git://github.com/wking/swc-boot-camps.git version-control`
+
+Auxiliary branches
+==================
+
+There are also a few other branches that are useful for boot camps,
+but not subjects that we officially teach.
+
+Setup
+-----
+
+* `git://github.com/wking/swc-boot-camps.git installation-test`
+* `git://github.com/wking/swc-boot-camps.git windows-installer`
+* `git://github.com/wking/swc-boot-camps.git get-my-ip`
+
+[contrib]: https://github.com/swcarpentry/boot-camps/blob/master/CONTRIBUTING.md
+[wiki]: https://github.com/swcarpentry/boot-camps/wiki
+[best-practices]: http://arxiv.org/abs/1210.0530

diff --git a/modular/README.md b/modular/README.md
new file mode 100644 (file)
index 0000000..5bf4f92
--- /dev/null
+++ b/modular/README.md
@@ -0,0 +1,3 @@
+Modular programming.  [DRY][] for the win!
+
+[DRY]: http://en.wikipedia.org/wiki/Don%27t_repeat_yourself

diff --git a/modular/shell/README.md b/modular/shell/README.md
new file mode 100644 (file)
index 0000000..9e9eafb
--- /dev/null
+++ b/modular/shell/README.md
@@ -0,0 +1,17 @@
+The *shell* is a program that presents a command line interface which
+allows you to control your computer using commands entered with a
+keyboard instead of controlling graphical user interfaces (GUIs) with
+a mouse/keyboard combination.
+
+There are many reasons to learn about the shell. In my opinion, the
+most important reasons are that:
+
+1.  It is very common to encounter the shell and
+    command-line-interfaces in scientific computing, so you will
+    probably have to learn it eventually
+
+2.  The shell is a really powerful way of interacting with your
+    computer. GUIs and the shell are complementary—by knowing both you
+    will greatly expand the range of tasks you can accomplish with
+    your computer. You will also be able to perform many tasks more
+    efficiently.

diff --git a/modular/shell/cheat-sheet.md b/modular/shell/cheat-sheet.md
new file mode 100644 (file)
index 0000000..707362e
--- /dev/null
+++ b/modular/shell/cheat-sheet.md
@@ -0,0 +1,204 @@
+# Basic Shell Commands
+***
+
+## 1. Shell Basics:
+
+| Command        | Definition                                                                                                     |
+|----------------|----------------------------------------------------------------------------------------------------------------|  
+| `.`            | a single period refers to the current directory                                                                |  
+| `..`           | a double period refers to the directory immediately above the current directory                                |  
+| `~`            | refers to your home directory. _Note:_ this command does NOT work on Windows machines (Mac and Linux are okay) |  
+| `cd ./dirname` | changes the current directory to the directory `dirname`                                                       |  
+| `ls -F`        | tells you what files and directories are in the current directory                                              |  
+|  `pwd`         | tells you what directory you are in (`pwd` stands for *p*rint *w*orking *d*irectory)                           |  
+|  `history`     | lists previous commands you have entered. `history | less` lets you page through the list.                     |  
+|  `man` *cmd*   | displays the *man*ual page for a command.                                                                      |  
+
+
+
+## 2. Creating Things:
+### a) How to create new files and directories..
+
+| Command           | Definition                                                                                                                                                                                                                                                                                                                                            |  
+|-------------------|-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------|  
+| `mkdir ./dirname` | makes a new directory called dirname below the current directory. _Note:_ Windows users will need to use `\` instead of `/` for the path separator                                                                                                                                                                                                    |  
+| `nano filename`   | if `filename` does not exist, `nano` creates it and opens the `nano` text editor. If the file exists, `nano` opens it. _Note:_ _(i)_ You can use a different text editor if you like.  In gnome Linux, `gedit` works really well too. _(ii)_ `nano` (or `gedit`) create text files. It doesn't matter what the file extension is (or if there is one) |  
+
+### b) How to delete files and directories...
+#### _Remember that deleting is forever. There is NO going back_
+
+| Command           | Definition                                                                                                       |  
+|-------------------|------------------------------------------------------------------------------------------------------------------|
+| `rm ./filename`   | deletes a file called `filename` from the current directory                                                      |  
+| `rmdir ./dirname` |  deletes the directory `dirname` from the current directory. _Note:_ `dirname` must be empty for `rmdir` to run. |  
+
+### c) How to copy and rename files and directories...
+
+| Command | Definition                                                                                                                                                                                                                    |  
+|---------|-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------|  
+| `mv tmp/filename .` | moves the file `filename` from the directory `tmp` to the current directory. _Note:_ _(i)_ the original `filename` in `tmp` is deleted. _(ii)_ `mv` can also be used to rename files (e.g., `mv filename newname` |  
+| `cp tmp/filename .` | copies the file `filename` from the directory `tmp` to the current directory. _Note:_ _(i)_ the original file is still there                                                                                      |  
+
+
+
+## 3. Pipes and Filters
+### a) How to use wildcards to match filenames...
+Wildcards are a shell feature that makes the command line much more powerful than any GUI file managers. 
+Wildcards are particularly useful when you are looking for directories, files, or file content that can
+vary along a given dimension.  These wildcards can be used with any command that accepts file names or 
+text strings as arguments.
+
+#### Table of commonly used wildcards 
+
+| Wildcard               | Matches                                        |  
+|------------------------|------------------------------------------------|  
+| `*`                    | zero or more characters                        |  
+| `?`                    | exactly one character                          |  
+| `[abcde]`              | exactly one of the characters listed           |  
+| `[a-e]`                | exactly one character in the given range       |  
+| `[!abcde]`             | any character not listed                       |  
+| `[!a-e]`               | any character that is not in the given range   |  
+| `{software,carpentry}` | exactly one entire word from the options given |  
+
+See the cheatsheet on regular expressions for more "wildcard" shortcuts.
+
+### b) How to redirect to a file and get input from a file ...
+Redirection operators can be used to redirect the ouput from a program from the display screen to a file where it is saved (or many other places too, like your printer or to another program where it can be used as input).
+
+
+| Command | Description                                                                                                                     |  
+|---------|---------------------------------------------------------------------------------------------------------------------------------|  
+| `>`     | write `stdout` to a new file; overwrites any file with that name (e.g., `ls *.md > mardkownfiles.txt`)                          |  
+| `>>`    | append `stdout` to a previously existing file; if the file does not exist, it is created (e.g., `ls *.md >> markdownfiles.txt`) |  
+| `<`     | assigns the information in a file to a variable, loop, etc (e.g., `n < markdownfiles.md`)                                       | 
+
+
+
+#### b.1) How to use the output of one command as the input to another with a pipe...
+A special kind of redirection is called a pipe and is denoted by `|`. 
+
+
+| Command | Description                                                                                                                                           |  
+|---------|-------------------------------------------------------------------------------------------------------------------------------------------------------|  
+| &#124;     | Output from one command line program can be used as input to another one (e.g. ls \*.md &#124; head gives you the first 5 `*.md` files in your directory) |  
+
+
+
+
+
+##### Example:   
+
+    ls *.md | head | sed -i `s/markdown/software/g`
+   
+changes all the instances of the word `markdown` to `software` in the first 5 `*.md` files in your current directory.
+
+
+ 
+
+## 4. How to repeat operations using a loop...
+Loops assign a value in a list or counter to a variable that takes on a different value each time through the loop.
+There are 2 primary kinds of loops: `for` loops and `while` loops.
+
+### a) For loop
+For loops loop through variables in a list
+
+
+    for varname in list
+    do
+        command 1
+        command 2
+    done
+
+where,
+
+*  `for`, `in`, `do`, and `done` are keywords
+*  `list` contains a list of values separated by spaces. e.g. `list` can be replaced by `1 2 3 4 5 6` or by `Bob Mary Sue Greg`. `list` can also be a variable:
+
+--
+
+    list[0]=Sam
+    list[1]=Lynne
+    list[2]=Dhavide
+    list[3]=Trevor
+    .
+    .
+    .
+    list[n]=Mark
+    
+which is referenced in the loop by:
+
+    for varname in ${list[@]}
+    do
+        command 1
+        command 2
+    done
+
+
+_Note:_ Bash is zero indexed, so counting always starts at `0`, not `1`.
+    
+
+### b) While Loop
+While loops loop through the commands until a condition is met. For example
+    
+    COUNTER=0
+    while [ ${COUNTER} -lt 10 ]; do
+        command 1
+        command 2
+        COUNTER=`expr ${COUNTER} + 1` 
+    done
+
+continues the loop as long as the value in the variable COUNTER is less than 10 (incremented by 1 on each iteration of the loop).
+
+*  `while`, `do`, and `done` are keywords
+
+
+#### b.1) Commonly used conditional operators
+
+| Operator | Definition               |  
+|----------|--------------------------|  
+| `-eq`    | is equal to              |  
+| `-ne`    | is not equal to          |  
+| `-gt`    | greater than             |
+| `-ge`    | greater than or equal to |
+| `-lt`    | less than                |
+| `-le`    | less than or equal to    |
+
+Use `man bash` or `man test` to learn about other operators you can use.
+
+
+
+## 6. Finding Things
+### a) How to select lines matching patterns in text files...
+To find information within files, you use a command called `grep`.
+
+| Example command                | Description                                                                                    |
+|--------------------------------|------------------------------------------------------------------------------------------------|
+| `grep [options] day haiku.txt` | finds every instance of the string `day` in the file haiku.txt and pipes it to standard output |                                                                                                                                                                                                                |  
+
+#### a.1) Commonly used `grep` options
+
+|      | `grep` options                                                                                                                                                                                                       |  
+|------|----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------|  
+| `-E` | tells grep you will be using a regular expression. Enclose the regular expression in quotes. _Note:_ the power of `grep` comes from using regular expressions. Please see the regular expressions sheet for examples |  
+| `-i` | makes matching case-insensitive                                                                                                                                                                                      |  
+| `-n` | limits the number of lines that match to the first n matches                                                                                                                                                         |   
+| `-v` | shows lines that do not match the pattern (inverts the match)                                                                                                                                                        |  
+| `-w` | outputs instances where the pattern is a whole word                                                                                                                                                                  |  
+
+### b) How to find files with certain properties...
+To find file and directory names, you use a command called `find`
+
+| Example command  | Description |  
+|------------------|-------------|
+| `find . -type d` | `find` recursively descends the directory tree for each path listed to match the expression given in the command line with file or directory names in the search path |  
+
+
+#### b.1) Commonly used `find` options
+
+|               | `find` options                                                                                                                                          |  
+|---------------|---------------------------------------------------------------------------------------------------------------------------------------------------------|  
+| `-type [df]`  | `d` lists directories; `f` lists files                                                                                                                  |  
+| `-maxdepth n` | `find` automatically searches subdirectories. If you don't want that, specify the number of levels below the working directory you would like to search |
+| `-mindepth n` | starts `find`'s search `n` levels below the working directory                                                                                           |
+
+

diff --git a/modular/shell/exercises/dictionary/dictionary.txt b/modular/shell/exercises/dictionary/dictionary.txt
new file mode 100644 (file)
index 0000000..5a2f578
--- /dev/null
+++ b/modular/shell/exercises/dictionary/dictionary.txt
@@ -0,0 +1,850 @@
+a
+able
+about
+account
+acid
+across
+act
+addition
+adjustment
+advertisement
+agreement
+after
+again
+against
+air
+all
+almost
+among
+amount
+amusement
+and
+angle
+angry
+animal
+answer
+ant
+any
+apparatus
+apple
+approval
+arch
+argument
+arm
+army
+art
+as
+at
+attack
+attempt
+attention
+attraction
+authority
+automatic
+awake
+baby
+back
+bad
+bag
+balance
+ball
+band
+base
+basin
+basket
+bath
+be
+beautiful
+because
+bed
+bee
+before
+behavior
+belief
+bell
+bent
+berry
+between
+bird
+birth
+bit
+bite
+bitter
+black
+blade
+blood
+blow
+blue
+board
+boat
+body
+boiling
+bone
+book
+boot
+bottle
+box
+boy
+brain
+brake
+branch
+brass
+bread
+breath
+brick
+bridge
+bright
+broken
+brother
+brown
+brush
+bucket
+building
+bulb
+burn
+burst
+business
+but
+butter
+button
+by
+cake
+camera
+canvas
+card
+care
+carriage
+cart
+cat
+cause
+certain
+chain
+chalk
+chance
+change
+cheap
+cheese
+chemical
+chest
+chief
+chin
+church
+circle
+clean
+clear
+clock
+cloth
+cloud
+coal
+coat
+cold
+collar
+color
+comb
+come
+comfort
+committee
+common
+company
+comparison
+competition
+complete
+complex
+condition
+connection
+conscious
+control
+cook
+copper
+copy
+cord
+cork
+cotton
+cough
+country
+cover
+cow
+crack
+credit
+crime
+cruel
+crush
+cry
+cup
+current
+curtain
+curve
+cushion
+cut
+damage
+danger
+dark
+daughter
+day
+dead
+dear
+death
+debt
+decision
+deep
+degree
+delicate
+dependent
+design
+desire
+destruction
+detail
+development
+different
+digestion
+direction
+dirty
+discovery
+discussion
+disease
+disgust
+distance
+distribution
+division
+do
+dog
+door
+down
+doubt
+drain
+drawer
+dress
+drink
+driving
+drop
+dry
+dust
+ear
+early
+earth
+east
+edge
+education
+effect
+egg
+elastic
+electric
+end
+engine
+enough
+equal
+error
+even
+event
+ever
+every
+example
+exchange
+existence
+expansion
+experience
+expert
+eye
+face
+fact
+fall
+false
+family
+far
+farm
+fat
+father
+fear
+feather
+feeble
+feeling
+female
+fertile
+fiction
+field
+fight
+finger
+fire
+first
+fish
+fixed
+flag
+flame
+flat
+flight
+floor
+flower
+fly
+fold
+food
+foolish
+foot
+for
+force
+fork
+form
+forward
+fowl
+frame
+free
+frequent
+friend
+from
+front
+fruit
+full
+future
+garden
+general
+get
+girl
+give
+glass
+glove
+go
+goat
+gold
+good
+government
+grain
+grass
+great
+green
+grey/gray
+grip
+group
+growth
+guide
+gun
+hair
+hammer
+hand
+hanging
+happy
+harbor
+hard
+harmony
+hat
+hate
+have
+he
+head
+healthy
+hearing
+heart
+heat
+help
+here
+high
+history
+hole
+hollow
+hook
+hope
+horn
+horse
+hospital
+hour
+house
+how
+humor
+I
+ice
+idea
+if
+ill
+important
+impulse
+in
+increase
+industry
+ink
+insect
+instrument
+insurance
+interest
+invention
+iron
+island
+jelly
+jewel
+join
+journey
+judge
+jump
+keep
+kettle
+key
+kick
+kind
+kiss
+knee
+knife
+knot
+knowledge
+land
+language
+last
+late
+laugh
+law
+lead
+leaf
+learning
+leather
+left
+leg
+let
+letter
+level
+library
+lift
+light
+like
+limit
+line
+linen
+lip
+liquid
+list
+little
+living
+lock
+long
+look
+loose
+loss
+loud
+love
+low
+machine
+make
+male
+man
+manager
+map
+mark
+market
+married
+match
+material
+mass
+may
+meal
+measure
+meat
+medical
+meeting
+memory
+metal
+middle
+military
+milk
+mind
+mine
+minute
+mist
+mixed
+money
+monkey
+month
+moon
+morning
+mother
+motion
+mountain
+mouth
+move
+much (more, most)
+muscle
+music
+nail
+name
+narrow
+nation
+natural
+near
+necessary
+neck
+need
+needle
+nerve
+net
+new
+news
+night
+no
+noise
+normal
+north
+nose
+not
+note
+now
+number
+nut
+observation
+of
+off
+offer
+office
+oil
+old
+on
+only
+open
+operation
+opposite
+opinion
+other
+or
+orange
+order
+organization
+ornament
+out
+oven
+over
+owner
+page
+pain
+paint
+paper
+parallel
+parcel
+part
+past
+paste
+payment
+peace
+pen
+pencil
+person
+physical
+picture
+pig
+pin
+pipe
+place
+plane
+plant
+plate
+play
+please
+pleasure
+plough/plow
+pocket
+point
+poison
+polish
+political
+poor
+porter
+position
+possible
+pot
+potato
+powder
+power
+present
+price
+print
+prison
+private
+probable
+process
+produce
+profit
+property
+prose
+protest
+public
+pull
+pump
+punishment
+purpose
+push
+put
+quality
+question
+quick
+quiet
+quite
+rail
+rain
+range
+rat
+rate
+ray
+reaction
+red
+reading
+ready
+reason
+receipt
+record
+regret
+regular
+relation
+religion
+representative
+request
+respect
+responsible
+rest
+reward
+rhythm
+rice
+right
+ring
+river
+road
+rod
+roll
+roof
+room
+root
+rough
+round
+rub
+rule
+run
+sad
+safe
+sail
+salt
+same
+sand
+say
+scale
+school
+science
+scissors
+screw
+sea
+seat
+second
+secret
+secretary
+see
+seed
+selection
+self
+send
+seem
+sense
+separate
+serious
+servant
+sex
+shade
+shake
+shame
+sharp
+sheep
+shelf
+ship
+shirt
+shock
+shoe
+short
+shut
+side
+sign
+silk
+silver
+simple
+sister
+size
+skin
+skirt
+sky
+sleep
+slip
+slope
+slow
+small
+smash
+smell
+smile
+smoke
+smooth
+snake
+sneeze
+snow
+so
+soap
+society
+sock
+soft
+solid
+some
+son
+song
+sort
+sound
+south
+soup
+space
+spade
+special
+sponge
+spoon
+spring
+square
+stamp
+stage
+star
+start
+statement
+station
+steam
+stem
+steel
+step
+stick
+still
+stitch
+stocking
+stomach
+stone
+stop
+store
+story
+strange
+street
+stretch
+sticky
+stiff
+straight
+strong
+structure
+substance
+sugar
+suggestion
+summer
+support
+surprise
+such
+sudden
+sun
+sweet
+swim
+system
+table
+tail
+take
+talk
+tall
+taste
+tax
+teaching
+tendency
+test
+than
+that
+the
+then
+theory
+there
+thick
+thin
+thing
+this
+thought
+thread
+throat
+though
+through
+thumb
+thunder
+ticket
+tight
+tired
+till
+time
+tin
+to
+toe
+together
+tomorrow
+tongue
+tooth
+top
+touch
+town
+trade
+train
+transport
+tray
+tree
+trick
+trousers
+true
+trouble
+turn
+twist
+umbrella
+under
+unit
+use
+up
+value
+verse
+very
+vessel
+view
+violent
+voice
+walk
+wall
+waiting
+war
+warm
+wash
+waste
+watch
+water
+wave
+wax
+way
+weather
+week
+weight
+well
+west
+wet
+wheel
+when
+where
+while
+whip
+whistle
+white
+who
+why
+wide
+will
+wind
+window
+wine
+wing
+winter
+wire
+wise
+with
+woman
+wood
+wool
+word
+work
+worm
+wound
+writing
+wrong
+year
+yellow
+yes
+yesterday
+you
+young

diff --git a/modular/shell/exercises/genotype/1000gp.vcf b/modular/shell/exercises/genotype/1000gp.vcf
new file mode 100644 (file)
index 0000000..0ab0553
--- /dev/null
+++ b/modular/shell/exercises/genotype/1000gp.vcf
@@ -0,0 +1,45034 @@
+##fileformat=VCFv4.0
+##INFO=<ID=AA,Number=1,Type=String,Description="Ancestral Allele, ftp://ftp.1000genomes.ebi.ac.uk/vol1/ftp/pilot_data/technical/reference/ancestral_alignments/README">
+##INFO=<ID=DP,Number=1,Type=Integer,Description="Total Depth">
+##INFO=<ID=HM2,Number=0,Type=Flag,Description="HapMap2 membership">
+##INFO=<ID=HM3,Number=0,Type=Flag,Description="HapMap3 membership">
+##reference=human_b36_both.fasta
+##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
+##FORMAT=<ID=GQ,Number=1,Type=Integer,Description="Genotype Quality">
+##FORMAT=<ID=DP,Number=1,Type=Integer,Description="Read Depth">
+#CHROM POS     ID      REF     ALT     QUAL    FILTER  INFO    FORMAT  NA19239 NA19238 NA19240
+4      21394356        rs4267723       C       T       .       PASS    AA=t;DP=75      GT:GQ:DP        0/1:100:12      0/1:87:17       0/1:100:46
+6      133067633       rs58462224      A       T       .       PASS    AA=A;DP=69      GT:GQ:DP        0/1:100:14      0/1:41:14       0/1:72:41
+1      99349778        rs11810975      C       T       .       PASS    AA=T;DP=89;HM2  GT:GQ:DP        0/1:100:14      0/1:50:21       0/1:100:53
+5      161201745       rs4632839       A       G       .       PASS    AA=A;DP=75      GT:GQ:DP        0/1:100:15      0/1:100:19      0/1:100:42
+17     43709672        rs12948128      A       G       .       PASS    AA=A;DP=82      GT:GQ:DP        0/1:100:15      0/1:81:21       0/1:100:45
+21     39726807        rs61342945      A       C       .       PASS    AA=A;DP=93      GT:GQ:DP        0/1:100:16      0/1:31:15       0/1:100:60
+2      107696624       rs1473289       C       T       .       PASS    AA=C;DP=71      GT:GQ:DP        0/1:100:16      0/1:41:12       0/1:100:29
+9      88276110        rs1360502       C       T       .       PASS    AA=T;DP=70      GT:GQ:DP        0/1:100:16      0/1:65:12       0/1:100:30
+14     25996425        rs1113319       C       T       .       PASS    AA=T;DP=81      GT:GQ:DP        0/1:100:16      0/1:77:16       0/1:100:48
+13     77923788        rs9318552       C       T       .       PASS    AA=c;DP=104     GT:GQ:DP        0/1:100:16      0/1:82:22       0/1:100:66
+1      73330688        rs10890006      A       T       .       PASS    AA=T;DP=73      GT:GQ:DP        0/1:100:16      0/1:86:14       0/1:100:42
+5      79997091        rs6151614       C       T       .       PASS    AA=t;DP=104     GT:GQ:DP        0/1:100:16      0/1:90:24       0/1:100:57
+13     77605002        rs9600974       G       T       .       PASS    AA=G;DP=79      GT:GQ:DP        0/1:100:16      0/1:99:26       0/1:100:28
+5      28740816        rs11948165      A       T       .       PASS    AA=A;DP=92      GT:GQ:DP        0/1:100:17      0/1:100:24      0/1:100:50
+3      107675598       rs1955156       C       T       .       PASS    AA=C;DP=83      GT:GQ:DP        0/1:100:17      0/1:100:25      0/1:100:42
+10     82801531        rs2152630       C       T       .       PASS    AA=C;DP=91      GT:GQ:DP        0/1:100:17      0/1:100:27      0/1:100:47
+4      84357589        rs28573091      C       T       .       PASS    AA=T;DP=110     GT:GQ:DP        0/1:100:17      0/1:45:18       0/1:100:74
+1      194922230       rs514756        A       T       .       PASS    AA=A;DP=74      GT:GQ:DP        0/1:100:17      0/1:50:15       0/1:100:41
+13     100831944       rs61973726      C       T       .       PASS    AA=C;DP=107     GT:GQ:DP        0/1:100:17      0/1:60:16       0/1:100:73
+6      129407992       rs7771364       A       T       .       PASS    AA=A;DP=78      GT:GQ:DP        0/1:100:17      0/1:67:19       0/1:100:33
+7      145449767       rs2692362       C       T       .       PASS    AA=T;DP=79      GT:GQ:DP        0/1:100:17      0/1:69:15       0/1:100:45
+21     27702253        rs239667        C       T       .       PASS    AA=T;DP=97      GT:GQ:DP        0/1:100:17      0/1:86:23       0/1:100:52
+19     47879681        rs11881844      C       T       .       PASS    AA=c;DP=94      GT:GQ:DP        0/1:100:17      0/1:95:21       0/1:100:56
+10     52406531        rs7100341       A       G       .       PASS    AA=A;DP=102     GT:GQ:DP        0/1:100:18      0/1:100:16      0/1:100:56
+6      122612821       rs1456691       A       G       .       PASS    AA=A;DP=97      GT:GQ:DP        0/1:100:18      0/1:100:19      0/1:100:61
+12     110385211       .       C       G       .       PASS    AA=C;DP=85      GT:GQ:DP        0/1:100:18      0/1:100:22      0/1:100:46
+7      147567496       rs1534701       A       G       .       PASS    AA=G;DP=111     GT:GQ:DP        0/1:100:18      0/1:100:22      0/1:100:71
+6      67674067        rs9363666       G       T       .       PASS    AA=T;DP=97      GT:GQ:DP        0/1:100:18      0/1:100:25      0/1:100:53
+10     19776928        rs3908736       G       T       .       PASS    AA=G;DP=96      GT:GQ:DP        0/1:100:18      0/1:100:26      0/1:100:53
+7      83613099        rs4461845       A       G       .       PASS    AA=A;DP=104     GT:GQ:DP        0/1:100:18      0/1:100:29      0/1:100:57
+2      13403782        rs13428666      C       T       .       PASS    AA=T;DP=80      GT:GQ:DP        0/1:100:18      0/1:37:17       0/1:100:35
+1      85120537        rs4907009       C       G       .       PASS    AA=G;DP=68      GT:GQ:DP        0/1:100:18      0/1:46:14       0/1:100:34
+14     41926726        rs12432940      G       T       .       PASS    AA=g;DP=93      GT:GQ:DP        0/1:100:18      0/1:63:27       0/1:100:47
+3      112109163       rs7634941       C       T       .       PASS    AA=C;DP=93      GT:GQ:DP        0/1:100:18      0/1:70:15       0/1:100:57
+6      32778956        rs9275428       A       G       .       PASS    AA=N;DP=103     GT:GQ:DP        0/1:100:18      0/1:73:16       0/1:100:30
+11     102407028       rs10895379      C       T       .       PASS    AA=T;DP=70      GT:GQ:DP        0/1:100:18      0/1:75:13       0/1:100:41
+1      73624340        rs6671002       A       G       .       PASS    AA=A;DP=107;HM2;HM3     GT:GQ:DP        0/1:100:18      0/1:77:21       0/1:100:68
+5      29445071        rs56051937      C       T       .       PASS    AA=c;DP=87      GT:GQ:DP        0/1:100:18      0/1:84:22       0/1:100:48
+6      116024647       .       C       T       .       PASS    AA=C;DP=77      GT:GQ:DP        0/1:100:18      0/1:85:20       0/1:100:39
+11     21632349        rs10766844      A       G       .       PASS    AA=A;DP=87      GT:GQ:DP        0/1:100:18      0/1:96:16       0/1:100:53
+12     82870032        .       G       T       .       PASS    AA=T;DP=73      GT:GQ:DP        0/1:100:19      0/1:100:18      0/1:100:32
+10     55562408        rs7914232       C       T       .       PASS    AA=C;DP=124     GT:GQ:DP        0/1:100:19      0/1:100:22      0/1:100:82
+12     22195163        rs36064966      A       G       .       PASS    AA=A;DP=105     GT:GQ:DP        0/1:100:19      0/1:100:30      0/1:100:53
+6      31637313        rs2516392       C       G       .       PASS    AA=G;DP=98      GT:GQ:DP        0/1:100:19      0/1:23:22       0/1:100:46
+12     69895805        rs1705253       A       G       .       PASS    AA=A;DP=109     GT:GQ:DP        0/1:100:19      0/1:33:22       0/1:100:68
+16     56014199        .       A       G       .       PASS    AA=A;DP=119     GT:GQ:DP        0/1:100:19      0/1:37:24       0/1:100:76
+21     27022679        .       C       T       .       PASS    AA=T;DP=92      GT:GQ:DP        0/1:100:19      0/1:49:18       0/1:100:56
+20     53854403        rs6014536       C       T       .       PASS    AA=C;DP=99      GT:GQ:DP        0/1:100:19      0/1:51:16       0/1:100:68
+2      51864066        rs11563140      A       G       .       PASS    AA=A;DP=113     GT:GQ:DP        0/1:100:19      0/1:57:26       0/1:100:67
+9      12306502        rs7047049       C       T       .       PASS    AA=T;DP=84      GT:GQ:DP        0/1:100:19      0/1:61:10       0/1:100:54
+11     27423014        .       A       G       .       PASS    AA=A;DP=94      GT:GQ:DP        0/1:100:19      0/1:64:13       0/1:100:62
+6      146084962       .       A       T       .       PASS    AA=A;DP=90      GT:GQ:DP        0/1:100:19      0/1:69:15       0/1:100:54
+8      116089470       .       C       T       .       PASS    AA=C;DP=112     GT:GQ:DP        0/1:100:19      0/1:6:22        0/1:100:72
+1      196310141       rs16842297      A       G       .       PASS    AA=G;DP=118;HM2;HM3     GT:GQ:DP        0/1:100:19      0/1:73:25       0/1:100:75
+1      80541067        rs9425219       C       T       .       PASS    AA=T;DP=78      GT:GQ:DP        0/1:100:19      0/1:83:18       0/1:100:40
+2      227486001       rs10193404      A       G       .       PASS    AA=A;DP=85      GT:GQ:DP        0/1:100:19      0/1:86:21       0/1:100:43
+5      60674637        rs4484384       A       G       .       PASS    AA=G;DP=83      GT:GQ:DP        0/1:100:19      0/1:87:22       0/1:100:42
+6      2653428 rs9969099       G       T       .       PASS    AA=G;DP=87      GT:GQ:DP        0/1:100:19      0/1:89:17       0/1:100:51
+19     20800551        rs669804        A       G       .       PASS    AA=A;DP=84      GT:GQ:DP        0/1:100:19      0/1:91:23       0/1:100:31
+6      114734411       .       A       G       .       PASS    AA=A;DP=83      GT:GQ:DP        0/1:100:19      0/1:94:16       0/1:100:42
+11     78273817        rs6592810       C       T       .       PASS    AA=T;DP=109     GT:GQ:DP        0/1:100:19      0/1:98:16       0/1:100:73
+16     54014247        rs9302666       A       C       .       PASS    AA=C;DP=123     GT:GQ:DP        0/1:100:20      0/1:100:20      0/1:100:39
+1      148295886       rs6587748       A       G       .       PASS    AA=G;DP=98;HM2  GT:GQ:DP        0/1:100:20      0/1:100:23      0/1:100:54
+10     85130933        .       A       G       .       PASS    AA=A;DP=95      GT:GQ:DP        0/1:100:20      0/1:100:24      0/1:100:50
+3      108443371       rs9821094       A       G       .       PASS    AA=A;DP=111     GT:GQ:DP        0/1:100:20      0/1:100:25      0/1:100:60
+12     80705122        rs2178709       A       T       .       PASS    AA=T;DP=94      GT:GQ:DP        0/1:100:20      0/1:100:26      0/1:100:48
+6      66131288        rs4394197       C       T       .       PASS    AA=T;DP=108     GT:GQ:DP        0/1:100:20      0/1:100:26      0/1:100:64
+1      98631113        rs1526297       C       T       .       PASS    AA=T;DP=113;HM2;HM3     GT:GQ:DP        0/1:100:20      0/1:100:27      0/1:100:66
+5      163549279       rs6871284       C       T       .       PASS    AA=C;DP=123     GT:GQ:DP        0/1:100:20      0/1:100:28      0/1:100:74
+3      67654730        rs2362880       A       T       .       PASS    AA=T;DP=89      GT:GQ:DP        0/1:100:20      0/1:10:21       0/1:100:39
+13     20321681        rs59178106      C       T       .       PASS    AA=C;DP=89      GT:GQ:DP        0/1:100:20      0/1:15:8        0/1:100:65
+7      108137997       rs60694691      A       G       .       PASS    AA=A;DP=88      GT:GQ:DP        0/1:100:20      0/1:28:14       0/1:100:55
+11     16936364        rs11024091      C       T       .       PASS    AA=C;DP=71      GT:GQ:DP        0/1:100:20      0/1:34:11       0/1:100:42
+4      56092242        rs7692737       A       T       .       PASS    AA=A;DP=111     GT:GQ:DP        0/1:100:20      0/1:34:20       0/1:100:73
+10     133258543       rs7099190       C       T       .       PASS    AA=C;DP=103     GT:GQ:DP        0/1:100:20      0/1:36:17       0/1:100:61
+13     48573699        rs9568151       C       T       .       PASS    AA=C;DP=97      GT:GQ:DP        0/1:100:20      0/1:42:22       0/1:100:54
+11     28848132        rs7938868       C       T       .       PASS    AA=C;DP=101     GT:GQ:DP        0/1:100:20      0/1:50:18       0/1:100:61
+13     91681840        rs16947150      C       T       .       PASS    AA=C;DP=66      GT:GQ:DP        0/1:100:20      0/1:52:9        0/1:100:37
+12     10773616        rs797168        A       G       .       PASS    AA=A;DP=104     GT:GQ:DP        0/1:100:20      0/1:60:15       0/1:100:69
+18     48211253        rs2339345       A       C       .       PASS    AA=A;DP=96      GT:GQ:DP        0/1:100:20      0/1:62:14       0/1:100:63
+13     92712064        rs16948547      A       G       .       PASS    AA=a;DP=87      GT:GQ:DP        0/1:100:20      0/1:62:15       0/1:100:54
+4      82927964        rs12331435      C       T       .       PASS    AA=C;DP=81      GT:GQ:DP        0/1:100:20      0/1:69:10       0/1:100:50
+2      29572861        rs4666230       A       G       .       PASS    AA=A;DP=129     GT:GQ:DP        0/1:100:20      0/1:72:18       0/1:100:92
+18     31200883        rs9964790       C       T       .       PASS    AA=c;DP=94      GT:GQ:DP        0/1:100:20      0/1:73:13       0/1:100:61
+5      114641946       rs267297        A       G       .       PASS    AA=A;DP=94      GT:GQ:DP        0/1:100:20      0/1:76:22       0/1:100:52
+3      163230157       rs7632987       A       G       .       PASS    AA=A;DP=89      GT:GQ:DP        0/1:100:20      0/1:79:20       0/1:100:50
+20     59855625        rs6142875       C       T       .       PASS    AA=C;DP=111     GT:GQ:DP        0/1:100:20      0/1:82:16       0/1:100:73
+10     2371544 rs7100862       C       T       .       PASS    AA=T;DP=86      GT:GQ:DP        0/1:100:20      0/1:86:22       0/1:100:45
+4      139657603       rs299122        A       G       .       PASS    AA=A;DP=108     GT:GQ:DP        0/1:100:20      0/1:92:21       0/1:100:68
+19     34204167        rs3960958       C       T       .       PASS    AA=C;DP=82      GT:GQ:DP        0/1:100:20      0/1:94:15       0/1:100:33
+13     69953980        rs1930888       A       G       .       PASS    AA=a;DP=122     GT:GQ:DP        0/1:100:20      0/1:97:22       0/1:100:77
+10     8912791 .       A       G       .       PASS    AA=A;DP=92      GT:GQ:DP        0/1:100:21      0/1:100:17      0/1:100:52
+17     35230125        rs9904277       C       T       .       PASS    AA=T;DP=89      GT:GQ:DP        0/1:100:21      0/1:100:18      0/1:100:40
+5      86919892        rs1596091       A       G       .       PASS    AA=A;DP=94      GT:GQ:DP        0/1:100:21      0/1:100:18      0/1:100:53
+7      79535684        rs4727999       A       G       .       PASS    AA=A;DP=85      GT:GQ:DP        0/1:100:21      0/1:100:19      0/1:100:44
+15     84954786        rs2447265       A       G       .       PASS    AA=A;DP=114     GT:GQ:DP        0/1:100:21      0/1:100:20      0/1:100:74
+16     79455168        rs9938773       A       C       .       PASS    AA=A;DP=93      GT:GQ:DP        0/1:100:21      0/1:100:21      0/1:100:50
+6      159908738       rs9456423       G       T       .       PASS    AA=g;DP=99      GT:GQ:DP        0/1:100:21      0/1:100:24      0/1:100:53
+10     121270209       rs10886506      A       G       .       PASS    AA=G;DP=100     GT:GQ:DP        0/1:100:21      0/1:100:24      0/1:100:57
+9      103716687       rs12379524      A       T       .       PASS    AA=A;DP=87      GT:GQ:DP        0/1:100:21      0/1:100:25      0/1:100:31
+2      166604007       rs1019723       A       G       .       PASS    AA=G;DP=94      GT:GQ:DP        0/1:100:21      0/1:100:25      0/1:100:48
+13     63107766        rs17088637      G       T       .       PASS    AA=G;DP=99      GT:GQ:DP        0/1:100:21      0/1:100:25      0/1:100:54
+7      77817064        rs6976483       C       T       .       PASS    AA=C;DP=116     GT:GQ:DP        0/1:100:21      0/1:100:25      0/1:100:71
+1      80484236        rs1832964       A       G       .       PASS    AA=G;DP=120;HM2;HM3     GT:GQ:DP        0/1:100:21      0/1:100:26      0/1:100:32
+8      82580767        rs11988392      A       G       .       PASS    AA=G;DP=118     GT:GQ:DP        0/1:100:21      0/1:100:26      0/1:100:71
+14     54416123        rs61702394      A       G       .       PASS    AA=G;DP=110     GT:GQ:DP        0/1:100:21      0/1:100:28      0/1:100:61
+12     96738707        rs11109232      A       G       .       PASS    AA=G;DP=105     GT:GQ:DP        0/1:100:21      0/1:100:34      0/1:100:49
+2      117966732       rs6748732       A       G       .       PASS    AA=G;DP=143     GT:GQ:DP        0/1:100:21      0/1:100:42      0/1:100:32
+14     26418127        rs8014093       C       T       .       PASS    AA=C;DP=97      GT:GQ:DP        0/1:100:21      0/1:18:19       0/1:100:60
+15     85966008        rs4887315       A       G       .       PASS    AA=A;DP=94      GT:GQ:DP        0/1:100:21      0/1:28:19       0/1:100:56
+4      99639067        rs6532739       C       G       .       PASS    AA=G;DP=100     GT:GQ:DP        0/1:100:21      0/1:44:18       0/1:100:60
+21     26264863        rs128648        C       T       .       PASS    AA=T;DP=126     GT:GQ:DP        0/1:100:21      0/1:48:23       0/1:100:43
+4      91958001        rs17017683      C       T       .       PASS    AA=T;DP=97      GT:GQ:DP        0/1:100:21      0/1:60:22       0/1:100:54
+1      79812456        rs12142797      G       T       .       PASS    AA=T;DP=80      GT:GQ:DP        0/1:100:21      0/1:64:13       0/1:100:46
+3      75683915        .       G       T       .       PASS    AA=.;DP=99      GT:GQ:DP        0/1:100:21      0/1:65:21       0/1:100:58
+3      107514720       rs9847622       C       T       .       PASS    AA=T;DP=92      GT:GQ:DP        0/1:100:21      0/1:70:12       0/1:100:59
+13     60730184        .       C       T       .       PASS    AA=C;DP=81      GT:GQ:DP        0/1:100:21      0/1:77:22       0/1:100:38
+2      109305856       rs10198683      C       T       .       PASS    AA=C;DP=116     GT:GQ:DP        0/1:100:21      0/1:79:23       0/1:100:74
+4      20251562        rs1457913       A       T       .       PASS    AA=A;DP=105     GT:GQ:DP        0/1:100:21      0/1:7:16        0/1:100:63
+9      2821149 rs2292000       A       C       .       PASS    AA=C;DP=98      GT:GQ:DP        0/1:100:21      0/1:85:27       0/1:100:52
+14     91316377        rs17127555      A       T       .       PASS    AA=A;DP=91      GT:GQ:DP        0/1:100:21      0/1:90:21       0/1:100:47
+1      218801372       rs12057177      A       G       .       PASS    AA=A;DP=118     GT:GQ:DP        0/1:100:21      0/1:90:24       0/1:100:75
+14     105943519       rs10145675      C       T       .       PASS    AA=c;DP=126     GT:GQ:DP        0/1:100:21      0/1:91:16       0/1:100:46
+4      96946320        rs4699462       C       T       .       PASS    AA=T;DP=81      GT:GQ:DP        0/1:100:21      0/1:92:22       0/1:100:26
+1      119474616       rs2498500       C       T       .       PASS    AA=C;DP=110;HM2;HM3     GT:GQ:DP        0/1:100:21      0/1:94:23       0/1:100:65
+2      149239319       rs16829245      G       T       .       PASS    AA=T;DP=104     GT:GQ:DP        0/1:100:21      0/1:9:15        0/1:100:66
+8      140786504       rs61490943      A       G       .       PASS    AA=G;DP=66      GT:GQ:DP        0/1:100:21      0/1:9:7 0/1:47:26
+6      76443194        rs17792285      A       G       .       PASS    AA=A;DP=102     GT:GQ:DP        0/1:100:22      0/1:100:16      0/1:100:64
+2      154729953       .       A       G       .       PASS    AA=A;DP=78      GT:GQ:DP        0/1:100:22      0/1:100:18      0/1:100:38
+2      46891870        rs2121320       A       G       .       PASS    AA=A;DP=100     GT:GQ:DP        0/1:100:22      0/1:100:18      0/1:100:62
+9      136876550       rs4428739       C       T       .       PASS    AA=C;DP=98      GT:GQ:DP        0/1:100:22      0/1:100:20      0/1:100:55
+10     93212003        rs9664423       A       G       .       PASS    AA=A;DP=99      GT:GQ:DP        0/1:100:22      0/1:100:21      0/1:100:43
+8      24891498        rs7000122       A       G       .       PASS    AA=A;DP=92      GT:GQ:DP        0/1:100:22      0/1:100:21      0/1:100:49
+5      24648167        rs1468020       A       T       .       PASS    AA=A;DP=100     GT:GQ:DP        0/1:100:22      0/1:100:23      0/1:100:57
+7      120418598       rs2721359       C       T       .       PASS    AA=C;DP=99      GT:GQ:DP        0/1:100:22      0/1:100:24      0/1:100:51
+11     132295158       rs7937764       A       T       .       PASS    AA=T;DP=102     GT:GQ:DP        0/1:100:22      0/1:100:24      0/1:100:57
+2      39849412        rs13400213      A       G       .       PASS    AA=A;DP=108     GT:GQ:DP        0/1:100:22      0/1:100:24      0/1:100:60
+3      12503583        rs1699362       A       G       .       PASS    AA=A;DP=119     GT:GQ:DP        0/1:100:22      0/1:100:24      0/1:100:73
+18     51803985        rs2646947       A       T       .       PASS    AA=T;DP=111     GT:GQ:DP        0/1:100:22      0/1:100:25      0/1:100:65
+14     33470694        rs1680702       A       G       .       PASS    AA=A;DP=133     GT:GQ:DP        0/1:100:22      0/1:100:27      0/1:100:84
+13     23997626        rs7325412       A       G       .       PASS    AA=N;DP=95      GT:GQ:DP        0/1:100:22      0/1:100:29      0/1:100:44
+2      66408350        rs2971827       C       T       .       PASS    AA=T;DP=93      GT:GQ:DP        0/1:100:22      0/1:18:10       0/1:100:62
+12     129180649       rs6486522       C       G       .       PASS    AA=G;DP=114     GT:GQ:DP        0/1:100:22      0/1:23:24       0/1:100:69
+2      67383937        rs10199961      A       C       .       PASS    AA=A;DP=98      GT:GQ:DP        0/1:100:22      0/1:25:16       0/1:100:59
+10     126284470       rs12777136      C       T       .       PASS    AA=C;DP=85      GT:GQ:DP        0/1:100:22      0/1:35:10       0/1:100:41
+16     79531035        rs9933697       A       G       .       PASS    AA=G;DP=101     GT:GQ:DP        0/1:100:22      0/1:50:15       0/1:100:64
+8      559870  rs7818044       A       G       .       PASS    AA=A;DP=79      GT:GQ:DP        0/1:100:22      0/1:55:17       0/1:100:40
+6      163669363       .       G       T       .       PASS    AA=G;DP=105     GT:GQ:DP        0/1:100:22      0/1:59:20       0/1:100:61
+21     30317126        rs396485        C       T       .       PASS    AA=T;DP=90      GT:GQ:DP        0/1:100:22      0/1:67:17       0/1:100:52
+4      117743129       .       G       T       .       PASS    AA=G;DP=116     GT:GQ:DP        0/1:100:22      0/1:71:22       0/1:100:63
+5      65533309        rs253212        C       T       .       PASS    AA=T;DP=117     GT:GQ:DP        0/1:100:22      0/1:71:25       0/1:100:68
+3      166880687       .       A       G       .       PASS    AA=A;DP=107     GT:GQ:DP        0/1:100:22      0/1:71:27       0/1:100:57
+4      78443882        rs28507973      C       T       .       PASS    AA=t;DP=82      GT:GQ:DP        0/1:100:22      0/1:72:18       0/1:100:43
+1      118699449       rs58937007      C       T       .       PASS    AA=C;DP=92      GT:GQ:DP        0/1:100:22      0/1:77:24       0/1:100:43
+9      89048217        rs10123032      A       T       .       PASS    AA=T;DP=96      GT:GQ:DP        0/1:100:22      0/1:79:20       0/1:100:52
+13     87907804        rs432394        C       T       .       PASS    AA=C;DP=95      GT:GQ:DP        0/1:100:22      0/1:83:17       0/1:100:37
+21     36972413        rs2835434       A       C       .       PASS    AA=A;DP=122     GT:GQ:DP        0/1:100:22      0/1:86:19       0/1:100:79
+4      97941603        rs12649421      A       G       .       PASS    AA=A;DP=121     GT:GQ:DP        0/1:100:22      0/1:8:20        0/1:100:79
+4      136430633       rs28406493      A       G       .       PASS    AA=A;DP=85      GT:GQ:DP        0/1:100:22      0/1:90:18       0/1:100:46
+7      90321339        rs57870103      C       G       .       PASS    AA=C;DP=138     GT:GQ:DP        0/1:100:22      0/1:90:25       0/1:100:92
+6      102855549       rs9322645       A       G       .       PASS    AA=G;DP=116     GT:GQ:DP        0/1:100:22      0/1:98:25       0/1:100:69
+7      5729445 .       C       T       .       PASS    AA=C;DP=113     GT:GQ:DP        0/1:100:23      0/1:100:16      0/1:100:73
+17     56997961        .       A       T       .       PASS    AA=a;DP=63      GT:GQ:DP        0/1:100:23      0/1:100:17      0/1:100:22
+13     66745642        rs1033941       C       T       .       PASS    AA=T;DP=86      GT:GQ:DP        0/1:100:23      0/1:100:17      0/1:100:44
+7      136857464       rs2293548       A       G       .       PASS    AA=G;DP=89      GT:GQ:DP        0/1:100:23      0/1:100:17      0/1:100:48
+2      49301937        rs4396759       A       G       .       PASS    AA=A;DP=81      GT:GQ:DP        0/1:100:23      0/1:100:19      0/1:100:38
+4      113010003       rs10025409      A       G       .       PASS    AA=G;DP=126     GT:GQ:DP        0/1:100:23      0/1:100:21      0/1:100:78
+1      208747653       rs12122881      C       G       .       PASS    AA=G;DP=117;HM2 GT:GQ:DP        0/1:100:23      0/1:100:23      0/1:100:74
+2      233846979       rs2289472       C       T       .       PASS    AA=C;DP=136     GT:GQ:DP        0/1:100:23      0/1:100:25      0/1:100:46
+9      29604347        .       A       G       .       PASS    AA=A;DP=113     GT:GQ:DP        0/1:100:23      0/1:100:25      0/1:100:62
+11     92212588        rs7104420       A       G       .       PASS    AA=G;DP=130     GT:GQ:DP        0/1:100:23      0/1:100:25      0/1:100:83
+8      57975972        rs12676415      A       G       .       PASS    AA=A;DP=101     GT:GQ:DP        0/1:100:23      0/1:100:26      0/1:100:53
+17     47003844        rs16950104      A       T       .       PASS    AA=A;DP=144     GT:GQ:DP        0/1:100:23      0/1:100:29      0/1:100:48
+14     84934104        rs7158945       C       G       .       PASS    AA=C;DP=121     GT:GQ:DP        0/1:100:23      0/1:100:31      0/1:100:69
+8      76383074        rs2048445       A       T       .       PASS    AA=A;DP=144     GT:GQ:DP        0/1:100:23      0/1:100:34      0/1:100:92
+12     53879339        rs61956000      A       C       .       PASS    AA=a;DP=140     GT:GQ:DP        0/1:100:23      0/1:100:35      0/1:100:39
+8      91924065        rs1463920       C       T       .       PASS    AA=C;DP=152     GT:GQ:DP        0/1:100:23      0/1:100:39      0/1:100:90
+4      3570401 .       C       T       .       PASS    AA=-;DP=110     GT:GQ:DP        0/1:100:23      0/1:31:21       0/1:100:56
+14     47964731        .       C       T       .       PASS    AA=C;DP=99      GT:GQ:DP        0/1:100:23      0/1:36:22       0/1:100:53
+9      117651259       rs10116601      C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        0/1:100:23      0/1:37:16       0/1:100:75
+1      64795883        rs10749747      C       T       .       PASS    AA=T;DP=113;HM2 GT:GQ:DP        0/1:100:23      0/1:46:15       0/1:100:35
+2      233515405       .       C       G       .       PASS    AA=C;DP=92      GT:GQ:DP        0/1:100:23      0/1:55:16       0/1:100:46
+2      34854176        rs10207883      C       T       .       PASS    AA=C;DP=93      GT:GQ:DP        0/1:100:23      0/1:59:19       0/1:100:50
+10     99767249        rs7082433       C       T       .       PASS    AA=C;DP=132     GT:GQ:DP        0/1:100:23      0/1:61:13       0/1:100:45
+6      75032898        rs9341459       A       G       .       PASS    AA=G;DP=101     GT:GQ:DP        0/1:100:23      0/1:63:19       0/1:100:56
+5      88784524        rs1528589       C       T       .       PASS    AA=c;DP=90      GT:GQ:DP        0/1:100:23      0/1:65:18       0/1:100:50
+19     33780434        .       C       T       .       PASS    AA=C;DP=89      GT:GQ:DP        0/1:100:23      0/1:66:16       0/1:100:50
+18     13000238        rs58871601      C       G       .       PASS    AA=C;DP=81      GT:GQ:DP        0/1:100:23      0/1:70:11       0/1:100:46
+11     99091924        rs610132        A       T       .       PASS    AA=T;DP=75      GT:GQ:DP        0/1:100:23      0/1:71:18       0/1:100:24
+12     27298842        rs744469        A       T       .       PASS    AA=A;DP=123     GT:GQ:DP        0/1:100:23      0/1:72:16       0/1:100:83
+10     64041798        .       C       T       .       PASS    AA=C;DP=126     GT:GQ:DP        0/1:100:23      0/1:72:22       0/1:100:83
+4      138824178       rs2462871       A       C       .       PASS    AA=A;DP=103     GT:GQ:DP        0/1:100:23      0/1:73:21       0/1:100:55
+10     62410756        rs11594559      C       T       .       PASS    AA=C;DP=100     GT:GQ:DP        0/1:100:23      0/1:76:19       0/1:100:55
+4      24291332        rs12640646      A       G       .       PASS    AA=A;DP=125     GT:GQ:DP        0/1:100:23      0/1:79:21       0/1:100:84
+6      112561920       rs13191507      A       G       .       PASS    AA=A;DP=104     GT:GQ:DP        0/1:100:23      0/1:79:22       0/1:100:58
+2      4923567 rs13024694      A       T       .       PASS    AA=T;DP=102     GT:GQ:DP        0/1:100:23      0/1:81:20       0/1:100:62
+11     20470864        rs10833336      C       G       .       PASS    AA=C;DP=107     GT:GQ:DP        0/1:100:23      0/1:81:28       0/1:100:56
+11     35657812        rs7928794       A       C       .       PASS    AA=A;DP=124     GT:GQ:DP        0/1:100:23      0/1:82:18       0/1:100:65
+8      34834353        rs7000035       A       T       .       PASS    AA=T;DP=118     GT:GQ:DP        0/1:100:23      0/1:83:27       0/1:100:69
+1      216796762       rs12022512      C       T       .       PASS    AA=c;DP=112;HM2 GT:GQ:DP        0/1:100:23      0/1:86:15       0/1:100:37
+7      150917485       rs4726057       C       T       .       PASS    AA=c;DP=106     GT:GQ:DP        0/1:100:23      0/1:90:21       0/1:100:63
+2      70430501        rs1478644       A       G       .       PASS    AA=A;DP=74      GT:GQ:DP        0/1:100:23      0/1:91:15       0/1:100:29
+13     65279006        rs17070530      G       T       .       PASS    AA=G;DP=98      GT:GQ:DP        0/1:100:23      0/1:91:20       0/1:100:59
+5      15124664        .       C       T       .       PASS    AA=C;DP=112     GT:GQ:DP        0/1:100:23      0/1:92:23       0/1:100:64
+6      76737141        rs6910325       A       G       .       PASS    AA=G;DP=96      GT:GQ:DP        0/1:100:23      0/1:94:17       0/1:100:57
+21     46759700        .       A       G       .       PASS    AA=G;DP=136     GT:GQ:DP        0/1:100:23      0/1:97:20       0/1:100:98
+4      117250893       rs28863548      C       T       .       PASS    AA=C;DP=96      GT:GQ:DP        0/1:100:23      0/1:98:21       0/1:100:52
+6      127938760       rs59033084      C       T       .       PASS    AA=C;DP=78      GT:GQ:DP        0/1:100:24      0/1:100:17      0/1:100:37
+16     82254401        .       C       G       .       PASS    AA=C;DP=99      GT:GQ:DP        0/1:100:24      0/1:100:19      0/1:100:59
+4      21165604        rs11943551      G       T       .       PASS    AA=G;DP=110     GT:GQ:DP        0/1:100:24      0/1:100:20      0/1:100:65
+11     32823976        rs11820154      A       T       .       PASS    AA=T;DP=75      GT:GQ:DP        0/1:100:24      0/1:100:21      0/1:100:29
+7      95466280        .       C       T       .       PASS    AA=C;DP=104     GT:GQ:DP        0/1:100:24      0/1:100:21      0/1:100:54
+14     92687255        rs8005924       A       G       .       PASS    AA=a;DP=104     GT:GQ:DP        0/1:100:24      0/1:100:21      0/1:100:57
+18     36929989        rs17689207      G       T       .       PASS    AA=G;DP=124     GT:GQ:DP        0/1:100:24      0/1:100:21      0/1:100:75
+14     53476138        rs2181735       A       T       .       PASS    AA=A;DP=109     GT:GQ:DP        0/1:100:24      0/1:100:22      0/1:100:66
+12     47202410        rs12579169      A       G       .       PASS    AA=a;DP=101     GT:GQ:DP        0/1:100:24      0/1:100:23      0/1:100:54
+15     94075474        rs12324270      A       C       .       PASS    AA=A;DP=100     GT:GQ:DP        0/1:100:24      0/1:100:23      0/1:100:55
+1      246180180       rs10788739      G       T       .       PASS    AA=g;DP=124     GT:GQ:DP        0/1:100:24      0/1:100:23      0/1:100:76
+6      114880600       rs1008682       C       T       .       PASS    AA=C;DP=142     GT:GQ:DP        0/1:100:24      0/1:100:25      0/1:100:48
+12     57051773        rs61922288      A       G       .       PASS    AA=A;DP=122     GT:GQ:DP        0/1:100:24      0/1:100:25      0/1:100:76
+8      34053291        rs10216404      A       T       .       PASS    AA=T;DP=125     GT:GQ:DP        0/1:100:24      0/1:100:28      0/1:100:32
+4      89056729        rs4693909       C       T       .       PASS    AA=C;DP=101     GT:GQ:DP        0/1:100:24      0/1:100:28      0/1:100:48
+3      173254448       rs11718418      A       G       .       PASS    AA=G;DP=116     GT:GQ:DP        0/1:100:24      0/1:100:28      0/1:100:64
+4      124848265       rs17810799      A       G       .       PASS    AA=A;DP=129     GT:GQ:DP        0/1:100:24      0/1:100:28      0/1:100:77
+3      65778348        rs12629744      A       C       .       PASS    AA=A;DP=119     GT:GQ:DP        0/1:100:24      0/1:100:32      0/1:100:62
+8      1948150 rs34515943      A       C       .       PASS    AA=A;DP=140     GT:GQ:DP        0/1:100:24      0/1:100:33      0/1:100:81
+5      4586554 rs7734974       C       T       .       PASS    AA=C;DP=143     GT:GQ:DP        0/1:100:24      0/1:100:34      0/1:100:83
+10     96057937        rs10509670      A       G       .       PASS    AA=a;DP=129     GT:GQ:DP        0/1:100:24      0/1:100:36      0/1:100:73
+1      190243273       .       A       C       .       PASS    AA=a;DP=122     GT:GQ:DP        0/1:100:24      0/1:100:40      0/1:100:60
+15     84558024        rs7171491       A       C       .       PASS    AA=C;DP=87      GT:GQ:DP        0/1:100:24      0/1:10:17       0/1:100:46
+21     36243857        .       A       G       .       PASS    AA=A;DP=93      GT:GQ:DP        0/1:100:24      0/1:11:29       0/1:91:29
+7      75184080        rs2868138       A       G       .       PASS    AA=T;DP=78      GT:GQ:DP        0/1:100:24      0/1:14:9        0/1:100:44
+4      161694629       rs1542045       G       T       .       PASS    AA=G;DP=92      GT:GQ:DP        0/1:100:24      0/1:38:13       0/1:100:43
+22     36358888        rs11913963      C       T       .       PASS    AA=c;DP=107     GT:GQ:DP        0/1:100:24      0/1:39:16       0/1:100:59
+4      104781208       rs6831831       C       T       .       PASS    AA=C;DP=90      GT:GQ:DP        0/1:100:24      0/1:39:17       0/1:100:51
+5      109880405       .       A       T       .       PASS    AA=A;DP=82      GT:GQ:DP        0/1:100:24      0/1:43:12       0/1:100:29
+6      70101744        .       A       T       .       PASS    AA=A;DP=80      GT:GQ:DP        0/1:100:24      0/1:45:26       0/1:100:23
+15     85646812        rs11638190      A       G       .       PASS    AA=G;DP=119     GT:GQ:DP        0/1:100:24      0/1:49:19       0/1:100:76
+11     132491388       rs7119176       C       T       .       PASS    AA=T;DP=116     GT:GQ:DP        0/1:100:24      0/1:50:17       0/1:100:73
+11     71834974        .       A       G       .       PASS    AA=A;DP=80      GT:GQ:DP        0/1:100:24      0/1:50:19       0/1:100:38
+6      38486059        rs60405483      C       T       .       PASS    AA=C;DP=94      GT:GQ:DP        0/1:100:24      0/1:51:15       0/1:100:55
+2      67900190        .       A       T       .       PASS    AA=A;DP=95      GT:GQ:DP        0/1:100:24      0/1:55:13       0/1:100:61
+1      61946128        rs17122688      C       T       .       PASS    AA=C;DP=95;HM2  GT:GQ:DP        0/1:100:24      0/1:58:17       0/1:100:55
+15     94993737        .       G       T       .       PASS    AA=G;DP=115     GT:GQ:DP        0/1:100:24      0/1:58:27       0/1:100:66
+7      152340373       rs10952384      A       G       .       PASS    AA=A;DP=85      GT:GQ:DP        0/1:100:24      0/1:59:20       0/1:100:31
+10     71276482        rs12146341      C       G       .       PASS    AA=G;DP=108     GT:GQ:DP        0/1:100:24      0/1:61:22       0/1:100:58
+6      145906869       rs110289        C       G       .       PASS    AA=G;DP=105     GT:GQ:DP        0/1:100:24      0/1:61:26       0/1:100:55
+6      92897095        rs3924791       A       G       .       PASS    AA=A;DP=111     GT:GQ:DP        0/1:100:24      0/1:62:26       0/1:100:61
+20     59443243        rs6089615       C       T       .       PASS    AA=c;DP=80      GT:GQ:DP        0/1:100:24      0/1:66:12       0/1:100:32
+5      19195043        rs7731105       C       T       .       PASS    AA=T;DP=80      GT:GQ:DP        0/1:100:24      0/1:69:17       0/1:100:30
+4      91808618        rs17182666      C       T       .       PASS    AA=T;DP=109     GT:GQ:DP        0/1:100:24      0/1:71:22       0/1:100:50
+2      115986151       rs969255        A       C       .       PASS    AA=C;DP=124     GT:GQ:DP        0/1:100:24      0/1:73:23       0/1:100:78
+4      116090480       rs998359        C       T       .       PASS    AA=T;DP=118     GT:GQ:DP        0/1:100:24      0/1:78:22       0/1:100:74
+2      13154706        rs16859760      A       G       .       PASS    AA=A;DP=112     GT:GQ:DP        0/1:100:24      0/1:80:19       0/1:100:71
+5      59774943        rs446883        C       T       .       PASS    AA=T;DP=95      GT:GQ:DP        0/1:100:24      0/1:81:23       0/1:100:45
+4      178378609       rs1371230       G       T       .       PASS    AA=G;DP=102     GT:GQ:DP        0/1:100:24      0/1:88:18       0/1:100:60
+2      17409583        rs12710643      A       G       .       PASS    AA=A;DP=112     GT:GQ:DP        0/1:100:24      0/1:89:15       0/1:100:75
+3      133122941       rs16838093      C       T       .       PASS    AA=C;DP=140     GT:GQ:DP        0/1:100:24      0/1:90:24       0/1:100:92
+7      148149944       rs6464926       C       T       .       PASS    AA=C;DP=106     GT:GQ:DP        0/1:100:24      0/1:95:21       0/1:100:63
+2      52565216        rs35848226      C       T       .       PASS    AA=C;DP=130     GT:GQ:DP        0/1:100:25      0/1:100:20      0/1:100:34
+1      191951277       rs7541925       A       G       .       PASS    AA=A;DP=93;HM2;HM3      GT:GQ:DP        0/1:100:25      0/1:100:20      0/1:100:35
+13     69628948        rs584093        G       T       .       PASS    AA=G;DP=88      GT:GQ:DP        0/1:100:25      0/1:100:20      0/1:100:44
+18     56365268        rs530676        A       C       .       PASS    AA=t;DP=118     GT:GQ:DP        0/1:100:25      0/1:100:21      0/1:100:70
+1      238407742       rs3765590       A       G       .       PASS    AA=A;DP=100     GT:GQ:DP        0/1:100:25      0/1:100:22      0/1:100:52
+3      157645261       rs6772280       A       G       .       PASS    AA=A;DP=144     GT:GQ:DP        0/1:100:25      0/1:100:24      0/1:100:50
+6      53788656        rs7763147       C       T       .       PASS    AA=C;DP=98      GT:GQ:DP        0/1:100:25      0/1:100:24      0/1:100:51
+7      66922568        rs11763855      A       T       .       PASS    AA=T;DP=119     GT:GQ:DP        0/1:100:25      0/1:100:25      0/1:100:71
+18     69032545        rs4606821       A       C       .       PASS    AA=C;DP=118     GT:GQ:DP        0/1:100:25      0/1:100:26      0/1:100:61
+6      109806052       rs1407620       C       T       .       PASS    AA=T;DP=133     GT:GQ:DP        0/1:100:25      0/1:100:27      0/1:100:41
+1      50260433        rs7551576       A       C       .       PASS    AA=C;DP=109     GT:GQ:DP        0/1:100:25      0/1:100:27      0/1:100:59
+8      137143328       rs7815902       A       G       .       PASS    AA=A;DP=118     GT:GQ:DP        0/1:100:25      0/1:100:27      0/1:100:64
+16     61803251        rs35298720      C       T       .       PASS    AA=T;DP=120     GT:GQ:DP        0/1:100:25      0/1:100:27      0/1:100:69
+6      7322095 rs9392151       A       G       .       PASS    AA=A;DP=135     GT:GQ:DP        0/1:100:25      0/1:100:28      0/1:100:81
+8      56511888        rs7819696       C       T       .       PASS    AA=C;DP=105     GT:GQ:DP        0/1:100:25      0/1:100:29      0/1:100:51
+2      205337424       rs2018532       C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        0/1:100:25      0/1:100:30      0/1:100:61
+9      113847462       rs7854368       A       G       .       PASS    AA=G;DP=130     GT:GQ:DP        0/1:100:25      0/1:100:32      0/1:100:75
+6      31445851        rs5006725       A       G       .       PASS    AA=a;DP=128     GT:GQ:DP        0/1:100:25      0/1:100:32      0/1:100:76
+18     26036059        .       A       G       .       PASS    AA=A;DP=126     GT:GQ:DP        0/1:100:25      0/1:10:20       0/1:100:75
+4      6375147 rs7697730       A       G       .       PASS    AA=G;DP=98      GT:GQ:DP        0/1:100:25      0/1:11:5        0/1:100:66
+15     96516375        rs55869720      C       T       .       PASS    AA=C;DP=129     GT:GQ:DP        0/1:100:25      0/1:19:19       0/1:100:42
+16     87258531        rs4782398       G       T       .       PASS    AA=t;DP=118     GT:GQ:DP        0/1:100:25      0/1:20:23       0/1:100:69
+9      76103714        rs7033695       A       G       .       PASS    AA=A;DP=89      GT:GQ:DP        0/1:100:25      0/1:26:19       0/1:100:43
+4      34035254        rs28460576      C       G       .       PASS    AA=G;DP=128     GT:GQ:DP        0/1:100:25      0/1:27:36       0/1:100:69
+9      116080553       .       C       G       .       PASS    AA=N;DP=112     GT:GQ:DP        0/1:100:25      0/1:28:12       0/1:100:77
+2      234617058       rs596463        G       T       .       PASS    AA=T;DP=94      GT:GQ:DP        0/1:100:25      0/1:33:17       0/1:100:51
+19     21126743        .       A       G       .       PASS    AA=A;DP=115     GT:GQ:DP        0/1:100:25      0/1:38:19       0/1:100:73
+3      126736616       .       G       T       .       PASS    AA=G;DP=76      GT:GQ:DP        0/1:100:25      0/1:40:15       0/1:100:39
+2      71460412        rs10175747      C       T       .       PASS    AA=C;DP=104     GT:GQ:DP        0/1:100:25      0/1:43:18       0/1:100:64
+11     93011324        rs58172303      C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        0/1:100:25      0/1:45:15       0/1:100:74
+12     82816046        .       C       T       .       PASS    AA=C;DP=89      GT:GQ:DP        0/1:100:25      0/1:48:18       0/1:100:46
+3      160994340       rs35176855      C       G       .       PASS    AA=C;DP=104     GT:GQ:DP        0/1:100:25      0/1:51:23       0/1:100:56
+1      103175856       rs2616012       A       T       .       PASS    AA=T;DP=104     GT:GQ:DP        0/1:100:25      0/1:54:18       0/1:100:49
+17     30298370        rs8072191       G       T       .       PASS    AA=G;DP=88      GT:GQ:DP        0/1:100:25      0/1:59:12       0/1:100:52
+4      42426595        rs1993676       C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        0/1:100:25      0/1:60:17       0/1:100:74
+16     77626307        rs8055815       A       G       .       PASS    AA=A;DP=93      GT:GQ:DP        0/1:100:25      0/1:63:14       0/1:100:51
+9      17521750        rs57258552      A       G       .       PASS    AA=A;DP=104     GT:GQ:DP        0/1:100:25      0/1:70:17       0/1:100:62
+14     41581597        rs1632694       C       T       .       PASS    AA=t;DP=100     GT:GQ:DP        0/1:100:25      0/1:72:20       0/1:100:52
+1      232431187       .       G       T       .       PASS    AA=G;DP=117     GT:GQ:DP        0/1:100:25      0/1:74:18       0/1:100:76
+4      21574581        rs10516405      G       T       .       PASS    AA=T;DP=109     GT:GQ:DP        0/1:100:25      0/1:75:22       0/1:100:62
+8      117685440       .       A       G       .       PASS    AA=A;DP=119     GT:GQ:DP        0/1:100:25      0/1:75:23       0/1:100:71
+4      28432331        rs12651660      C       T       .       PASS    AA=T;DP=108     GT:GQ:DP        0/1:100:25      0/1:83:15       0/1:100:68
+5      113489144       rs2954362       C       G       .       PASS    AA=C;DP=113     GT:GQ:DP        0/1:100:25      0/1:83:20       0/1:100:65
+20     9339743 rs56772399      A       G       .       PASS    AA=A;DP=111     GT:GQ:DP        0/1:100:25      0/1:83:21       0/1:100:67
+12     131060171       rs61944570      C       T       .       PASS    AA=C;DP=123     GT:GQ:DP        0/1:100:25      0/1:85:21       0/1:100:79
+3      168053993       rs9290299       A       G       .       PASS    AA=a;DP=92      GT:GQ:DP        0/1:100:25      0/1:87:17       0/1:100:49
+17     72403205        rs35331801      A       G       .       PASS    AA=G;DP=94      GT:GQ:DP        0/1:100:25      0/1:88:16       0/1:100:43
+7      43172698        rs6945704       A       G       .       PASS    AA=A;DP=95      GT:GQ:DP        0/1:100:25      0/1:90:21       0/1:100:48
+10     132571669       rs10741231      C       T       .       PASS    AA=t;DP=114     GT:GQ:DP        0/1:100:25      0/1:92:23       0/1:100:67
+1      222327005       rs2896918       A       G       .       PASS    AA=G;DP=97;HM2  GT:GQ:DP        0/1:100:25      0/1:93:14       0/1:100:57
+2      70768855        rs7340146       C       T       .       PASS    AA=C;DP=104     GT:GQ:DP        0/1:100:25      0/1:96:21       0/1:100:58
+1      156985940       rs432682        A       G       .       PASS    AA=A;DP=114;HM2 GT:GQ:DP        0/1:100:25      0/1:96:25       0/1:100:50
+14     21801724        rs9944066       G       T       .       PASS    AA=G;DP=115     GT:GQ:DP        0/1:100:25      0/1:98:23       0/1:100:65
+18     28294224        rs9948201       A       G       .       PASS    AA=A;DP=130     GT:GQ:DP        0/1:100:25      0/1:98:26       0/1:100:81
+8      127000783       rs2054999       C       G       .       PASS    AA=g;DP=107     GT:GQ:DP        0/1:100:25      0/1:98:27       0/1:100:56
+1      15301392        rs494916        A       G       .       PASS    AA=A;DP=104     GT:GQ:DP        0/1:100:25      0/1:9:13        0/1:100:65
+3      78822449        .       A       G       .       PASS    AA=G;DP=86      GT:GQ:DP        0/1:100:26      0/1:100:14      0/1:100:47
+7      29016019        rs547203        G       T       .       PASS    AA=T;DP=100     GT:GQ:DP        0/1:100:26      0/1:100:15      0/1:100:57
+7      42529103        rs28482312      C       T       .       PASS    AA=T;DP=132     GT:GQ:DP        0/1:100:26      0/1:100:17      0/1:100:86
+6      3933451 rs6597021       A       G       .       PASS    AA=A;DP=106     GT:GQ:DP        0/1:100:26      0/1:100:19      0/1:100:64
+1      193769657       rs7526468       A       C       .       PASS    AA=A;DP=105     GT:GQ:DP        0/1:100:26      0/1:100:20      0/1:100:62
+14     62436745        rs58900215      A       G       .       PASS    AA=A;DP=112     GT:GQ:DP        0/1:100:26      0/1:100:20      0/1:100:66
+7      88123464        rs17163211      C       G       .       PASS    AA=C;DP=118     GT:GQ:DP        0/1:100:26      0/1:100:20      0/1:100:74
+10     131487103       .       A       C       .       PASS    AA=A;DP=131     GT:GQ:DP        0/1:100:26      0/1:100:20      0/1:100:85
+17     12886217        .       G       T       .       PASS    AA=G;DP=101     GT:GQ:DP        0/1:100:26      0/1:100:21      0/1:100:52
+13     60225815        rs3106554       A       T       .       PASS    AA=T;DP=93      GT:GQ:DP        0/1:100:26      0/1:100:23      0/1:100:36
+5      27917551        rs10073792      A       G       .       PASS    AA=A;DP=107     GT:GQ:DP        0/1:100:26      0/1:100:23      0/1:100:58
+1      40311045        rs12061777      C       T       .       PASS    AA=C;DP=99;HM2;HM3      GT:GQ:DP        0/1:100:26      0/1:100:24      0/1:100:49
+15     86972981        rs16942113      A       C       .       PASS    AA=a;DP=116     GT:GQ:DP        0/1:100:26      0/1:100:24      0/1:100:64
+6      56849735        rs1870638       A       C       .       PASS    AA=C;DP=115     GT:GQ:DP        0/1:100:26      0/1:100:24      0/1:100:65
+5      100014052       rs6880868       C       T       .       PASS    AA=c;DP=129     GT:GQ:DP        0/1:100:26      0/1:100:24      0/1:100:78
+14     29721536        rs10438055      C       T       .       PASS    AA=C;DP=130     GT:GQ:DP        0/1:100:26      0/1:100:24      0/1:100:80
+4      131063472       rs2952878       A       G       .       PASS    AA=G;DP=116     GT:GQ:DP        0/1:100:26      0/1:100:25      0/1:100:63
+2      118688898       .       A       G       .       PASS    AA=A;DP=124     GT:GQ:DP        0/1:100:26      0/1:100:26      0/1:100:29
+5      164891490       rs4485950       C       T       .       PASS    AA=C;DP=93      GT:GQ:DP        0/1:100:26      0/1:100:26      0/1:100:40
+4      114760711       rs28494872      A       G       .       PASS    AA=A;DP=147     GT:GQ:DP        0/1:100:26      0/1:100:26      0/1:100:55
+3      151618458       rs61015726      A       C       .       PASS    AA=A;DP=119     GT:GQ:DP        0/1:100:26      0/1:100:27      0/1:100:66
+16     84531682        rs9927123       A       G       .       PASS    AA=A;DP=158     GT:GQ:DP        0/1:100:26      0/1:100:28      0/1:100:102
+3      181586202       rs6786246       A       G       .       PASS    AA=G;DP=102     GT:GQ:DP        0/1:100:26      0/1:100:28      0/1:100:51
+6      122551103       rs2606612       C       T       .       PASS    AA=c;DP=119     GT:GQ:DP        0/1:100:26      0/1:100:28      0/1:100:64
+20     47329620        rs238195        C       T       .       PASS    AA=T;DP=126     GT:GQ:DP        0/1:100:26      0/1:100:28      0/1:100:72
+8      2583275 rs35119879      C       T       .       PASS    AA=T;DP=114     GT:GQ:DP        0/1:100:26      0/1:100:29      0/1:100:59
+2      142583213       rs1900935       A       G       .       PASS    AA=G;DP=126     GT:GQ:DP        0/1:100:26      0/1:100:29      0/1:100:72
+11     20604245        rs11025661      G       T       .       PASS    AA=G;DP=134     GT:GQ:DP        0/1:100:26      0/1:100:29      0/1:100:79
+10     18290320        rs7095391       A       T       .       PASS    AA=T;DP=138     GT:GQ:DP        0/1:100:26      0/1:100:29      0/1:100:82
+9      27344796        rs6475991       C       G       .       PASS    AA=C;DP=149     GT:GQ:DP        0/1:100:26      0/1:100:30      0/1:100:87
+6      109693929       rs9398192       C       T       .       PASS    AA=C;DP=119     GT:GQ:DP        0/1:100:26      0/1:100:31      0/1:100:62
+3      133865849       rs61437184      C       T       .       PASS    AA=C;DP=142     GT:GQ:DP        0/1:100:26      0/1:100:31      0/1:100:82
+3      24956366        rs12629369      C       T       .       PASS    AA=T;DP=120     GT:GQ:DP        0/1:100:26      0/1:100:33      0/1:100:63
+3      39486283        .       A       G       .       PASS    AA=A;DP=109     GT:GQ:DP        0/1:100:26      0/1:13:22       0/1:100:58
+22     45679856        rs4823891       A       C       .       PASS    AA=C;DP=117     GT:GQ:DP        0/1:100:26      0/1:14:12       0/1:100:82
+20     57413979        rs748544        G       T       .       PASS    AA=g;DP=137     GT:GQ:DP        0/1:100:26      0/1:24:21       0/1:100:45
+15     63440458        .       G       T       .       PASS    AA=G;DP=83      GT:GQ:DP        0/1:100:26      0/1:43:10       0/1:100:47
+12     22722557        rs58491110      A       G       .       PASS    AA=A;DP=115     GT:GQ:DP        0/1:100:26      0/1:43:14       0/1:100:76
+9      71693325        rs4475565       C       T       .       PASS    AA=T;DP=70      GT:GQ:DP        0/1:100:26      0/1:43:8        0/1:100:36
+12     40501304        rs1553034       C       T       .       PASS    AA=C;DP=118     GT:GQ:DP        0/1:100:26      0/1:45:18       0/1:100:76
+6      107723126       rs2430473       C       T       .       PASS    AA=C;DP=111     GT:GQ:DP        0/1:100:26      0/1:46:18       0/1:100:68
+7      11963511        .       A       C       .       PASS    AA=A;DP=98      GT:GQ:DP        0/1:100:26      0/1:50:15       0/1:100:56
+7      42471648        rs10244840      A       G       .       PASS    AA=G;DP=115     GT:GQ:DP        0/1:100:26      0/1:56:19       0/1:100:57
+13     103136622       rs1412018       C       T       .       PASS    AA=T;DP=106     GT:GQ:DP        0/1:100:26      0/1:56:20       0/1:100:60
+12     129022096       rs667813        A       G       .       PASS    AA=A;DP=115     GT:GQ:DP        0/1:100:26      0/1:57:24       0/1:100:24
+2      6561133 rs404690        A       G       .       PASS    AA=G;DP=113     GT:GQ:DP        0/1:100:26      0/1:62:18       0/1:100:69
+5      23764989        rs4126013       A       G       .       PASS    AA=A;DP=102     GT:GQ:DP        0/1:100:26      0/1:63:14       0/1:100:61
+13     80606016        rs7337088       A       G       .       PASS    AA=A;DP=74      GT:GQ:DP        0/1:100:26      0/1:64:11       0/1:100:34
+20     865817  rs531356        C       T       .       PASS    AA=C;DP=84      GT:GQ:DP        0/1:100:26      0/1:65:19       0/1:100:31
+7      95311486        rs4729215       A       G       .       PASS    AA=A;DP=113     GT:GQ:DP        0/1:100:26      0/1:65:22       0/1:100:64
+9      15943591        rs2149231       G       T       .       PASS    AA=G;DP=107     GT:GQ:DP        0/1:100:26      0/1:65:23       0/1:100:59
+8      36681849        rs1892621       C       G       .       PASS    AA=G;DP=115     GT:GQ:DP        0/1:100:26      0/1:68:31       0/1:100:59
+3      97133959        rs986440        G       T       .       PASS    AA=T;DP=105     GT:GQ:DP        0/1:100:26      0/1:70:16       0/1:100:58
+10     106898541       rs2167623       A       G       .       PASS    AA=N;DP=114     GT:GQ:DP        0/1:100:26      0/1:71:21       0/1:100:65
+8      21830882        rs6993540       A       T       .       PASS    AA=A;DP=119     GT:GQ:DP        0/1:100:26      0/1:74:16       0/1:100:78
+4      144608373       rs7696619       A       G       .       PASS    AA=G;DP=125     GT:GQ:DP        0/1:100:26      0/1:75:23       0/1:100:75
+5      2158709 rs10051274      C       T       .       PASS    AA=T;DP=113     GT:GQ:DP        0/1:100:26      0/1:77:19       0/1:100:68
+13     62541675        .       A       G       .       PASS    AA=A;DP=145     GT:GQ:DP        0/1:100:26      0/1:79:32       0/1:84:56
+9      2531139 rs829972        G       T       .       PASS    AA=g;DP=109     GT:GQ:DP        0/1:100:26      0/1:80:21       0/1:100:64
+1      151052323       rs7531043       C       T       .       PASS    AA=C;DP=124     GT:GQ:DP        0/1:100:26      0/1:83:23       0/1:100:72
+19     6783880 rs11668094      A       G       .       PASS    AA=G;DP=160     GT:GQ:DP        0/1:100:26      0/1:85:25       0/1:100:52
+2      161505759       rs1524625       A       G       .       PASS    AA=A;DP=137     GT:GQ:DP        0/1:100:26      0/1:86:24       0/1:100:42
+4      19191090        .       A       T       .       PASS    AA=A;DP=110     GT:GQ:DP        0/1:100:26      0/1:88:17       0/1:100:67
+18     8128090 rs687245        A       G       .       PASS    AA=A;DP=114     GT:GQ:DP        0/1:100:26      0/1:88:18       0/1:100:69
+5      94345984        rs2033709       C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        0/1:100:26      0/1:90:20       0/1:100:54
+20     43281493        rs6104065       C       G       .       PASS    AA=G;DP=97      GT:GQ:DP        0/1:100:26      0/1:90:23       0/1:100:46
+19     61710506        rs58464193      C       T       .       PASS    AA=.;DP=131     GT:GQ:DP        0/1:100:26      0/1:91:15       0/1:100:87
+1      178426531       rs12091464      C       T       .       PASS    AA=C;DP=120;HM2 GT:GQ:DP        0/1:100:26      0/1:93:20       0/1:100:74
+1      100129629       rs2035960       A       G       .       PASS    AA=N;DP=102     GT:GQ:DP        0/1:100:26      0/1:93:24       0/1:100:52
+2      183366437       rs288297        G       T       .       PASS    AA=G;DP=152     GT:GQ:DP        0/1:100:26      0/1:93:26       0/1:100:57
+7      26813185        rs532320        C       T       .       PASS    AA=T;DP=136     GT:GQ:DP        0/1:100:26      0/1:93:37       0/1:100:71
+4      59786354        rs13152529      A       G       .       PASS    AA=G;DP=114     GT:GQ:DP        0/1:100:26      0/1:94:15       0/1:100:70
+7      145523150       rs12703790      A       T       .       PASS    AA=T;DP=103     GT:GQ:DP        0/1:100:26      0/1:94:22       0/1:100:57
+10     25799073        rs2480346       A       G       .       PASS    AA=G;DP=128     GT:GQ:DP        0/1:100:26      0/1:94:24       0/1:100:68
+10     16635452        rs61024175      A       G       .       PASS    AA=A;DP=126     GT:GQ:DP        0/1:100:26      0/1:95:16       0/1:100:86
+16     15563705        rs7198957       A       G       .       PASS    AA=A;DP=106     GT:GQ:DP        0/1:100:26      0/1:95:23       0/1:100:56
+9      18740076        rs563006        C       T       .       PASS    AA=T;DP=127     GT:GQ:DP        0/1:100:26      0/1:96:24       0/1:100:78
+7      85740397        rs58202480      C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        0/1:100:26      0/1:97:22       0/1:100:68
+5      126045704       rs6595727       A       C       .       PASS    AA=C;DP=113     GT:GQ:DP        0/1:100:26      0/1:97:33       0/1:100:47
+5      73448443        rs523423        C       G       .       PASS    AA=C;DP=105     GT:GQ:DP        0/1:100:26      0/1:98:23       0/1:100:58
+2      79097005        rs430601        A       T       .       PASS    AA=T;DP=114     GT:GQ:DP        0/1:100:26      0/1:98:29       0/1:100:62
+3      181451181       .       A       G       .       PASS    AA=A;DP=127     GT:GQ:DP        0/1:100:26      0/1:99:23       0/1:100:77
+12     84756297        rs1900700       C       T       .       PASS    AA=T;DP=87      GT:GQ:DP        0/1:100:27      0/1:100:17      0/1:100:40
+11     22523773        rs1399103       A       C       .       PASS    AA=C;DP=106     GT:GQ:DP        0/1:100:27      0/1:100:18      0/1:100:62
+3      191099236       rs4687102       G       T       .       PASS    AA=T;DP=112     GT:GQ:DP        0/1:100:27      0/1:100:19      0/1:100:51
+15     31020906        rs12916094      G       T       .       PASS    AA=T;DP=91      GT:GQ:DP        0/1:100:27      0/1:100:22      0/1:100:44
+3      99333090        .       A       C       .       PASS    AA=A;DP=109     GT:GQ:DP        0/1:100:27      0/1:100:24      0/1:48:58
+12     79993876        rs11114748      C       T       .       PASS    AA=C;DP=123     GT:GQ:DP        0/1:100:27      0/1:100:25      0/1:100:71
+19     33997375        rs7256398       C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        0/1:100:27      0/1:100:25      0/1:100:72
+6      56541766        rs6926648       A       C       .       PASS    AA=C;DP=101     GT:GQ:DP        0/1:100:27      0/1:100:27      0/1:100:48
+10     111028499       rs10787144      A       G       .       PASS    AA=G;DP=113     GT:GQ:DP        0/1:100:27      0/1:100:27      0/1:100:60
+3      181940325       .       A       G       .       PASS    AA=G;DP=114     GT:GQ:DP        0/1:100:27      0/1:100:27      0/1:100:60
+1      208389644       rs4844508       C       T       .       PASS    AA=T;DP=119;HM2 GT:GQ:DP        0/1:100:27      0/1:100:27      0/1:100:66
+7      54391623        rs1525138       C       T       .       PASS    AA=T;DP=135     GT:GQ:DP        0/1:100:27      0/1:100:28      0/1:100:82
+1      100362246       .       C       T       .       PASS    AA=C;DP=128     GT:GQ:DP        0/1:100:27      0/1:100:29      0/1:100:72
+2      29609623        rs4503952       A       G       .       PASS    AA=G;DP=116     GT:GQ:DP        0/1:100:27      0/1:100:30      0/1:100:59
+8      81454531        .       A       G       .       PASS    AA=G;DP=124     GT:GQ:DP        0/1:100:27      0/1:100:30      0/1:100:67
+9      99082852        rs7855042       A       G       .       PASS    AA=A;DP=127     GT:GQ:DP        0/1:100:27      0/1:100:30      0/1:100:70
+4      10615650        rs2086774       A       T       .       PASS    AA=T;DP=130     GT:GQ:DP        0/1:100:27      0/1:100:30      0/1:100:76
+14     38665544        rs12101069      G       T       .       PASS    AA=G;DP=123     GT:GQ:DP        0/1:100:27      0/1:100:31      0/1:100:66
+12     31278615        rs11609262      G       T       .       PASS    AA=G;DP=127     GT:GQ:DP        0/1:100:27      0/1:100:31      0/1:100:69
+10     62750722        rs10740045      C       G       .       PASS    AA=C;DP=131     GT:GQ:DP        0/1:100:27      0/1:100:31      0/1:100:75
+1      66949701        rs17129371      C       T       .       PASS    AA=C;DP=119;HM2 GT:GQ:DP        0/1:100:27      0/1:100:33      0/1:100:57
+7      124111103       rs60017067      A       T       .       PASS    AA=A;DP=154     GT:GQ:DP        0/1:100:27      0/1:100:37      0/1:100:91
+6      147309970       rs7742400       A       G       .       PASS    AA=A;DP=122     GT:GQ:DP        0/1:100:27      0/1:23:22       0/1:100:75
+8      54681840        rs11785059      G       T       .       PASS    AA=T;DP=80      GT:GQ:DP        0/1:100:27      0/1:30:15       0/1:100:39
+4      128360806       .       C       G       .       PASS    AA=C;DP=103     GT:GQ:DP        0/1:100:27      0/1:31:16       0/1:100:55
+11     66841337        rs4930418       C       T       .       PASS    AA=C;DP=95      GT:GQ:DP        0/1:100:27      0/1:32:10       0/1:100:59
+10     85277673        rs10886544      G       T       .       PASS    AA=G;DP=93      GT:GQ:DP        0/1:100:27      0/1:34:9        0/1:100:55
+6      71475203        rs9354937       A       G       .       PASS    AA=A;DP=101     GT:GQ:DP        0/1:100:27      0/1:36:30       0/1:100:32
+2      128569576       rs11690581      C       T       .       PASS    AA=C;DP=102     GT:GQ:DP        0/1:100:27      0/1:37:12       0/1:100:64
+2      236821572       rs13429797      A       G       .       PASS    AA=G;DP=119     GT:GQ:DP        0/1:100:27      0/1:38:12       0/1:100:82
+7      6028195 rs7811724       C       T       .       PASS    AA=T;DP=109     GT:GQ:DP        0/1:100:27      0/1:51:18       0/1:100:64
+4      86949538        rs6815441       C       T       .       PASS    AA=C;DP=85      GT:GQ:DP        0/1:100:27      0/1:54:16       0/1:100:42
+14     48408345        rs4614645       A       T       .       PASS    AA=T;DP=132     GT:GQ:DP        0/1:100:27      0/1:54:23       0/1:100:74
+16     48003568        rs7199569       A       G       .       PASS    AA=G;DP=108     GT:GQ:DP        0/1:100:27      0/1:55:12       0/1:100:71
+10     92356151        rs2800131       A       C       .       PASS    AA=N;DP=94      GT:GQ:DP        0/1:100:27      0/1:57:13       0/1:100:38
+20     51683622        .       A       T       .       PASS    AA=A;DP=127     GT:GQ:DP        0/1:100:27      0/1:58:21       0/1:100:82
+16     9307225 rs631208        A       G       .       PASS    AA=G;DP=116     GT:GQ:DP        0/1:100:27      0/1:58:23       0/1:100:66
+13     33760926        .       C       T       .       PASS    AA=C;DP=130     GT:GQ:DP        0/1:100:27      0/1:59:28       0/1:100:75
+4      33413223        rs13130631      A       G       .       PASS    AA=a;DP=116     GT:GQ:DP        0/1:100:27      0/1:59:30       0/1:100:60
+4      190463941       rs28561813      G       T       .       PASS    AA=G;DP=103     GT:GQ:DP        0/1:100:27      0/1:60:19       0/1:100:56
+11     131346779       rs3345  A       G       .       PASS    AA=A;DP=108     GT:GQ:DP        0/1:100:27      0/1:62:18       0/1:100:66
+6      71598010        rs59058072      G       T       .       PASS    AA=G;DP=106     GT:GQ:DP        0/1:100:27      0/1:62:22       0/1:100:54
+5      107188016       rs3909359       C       T       .       PASS    AA=C;DP=87      GT:GQ:DP        0/1:100:27      0/1:63:9        0/1:100:51
+11     7043471 rs4758155       A       G       .       PASS    AA=a;DP=100     GT:GQ:DP        0/1:100:27      0/1:67:12       0/1:100:61
+4      21891893        .       A       C       .       PASS    AA=C;DP=96      GT:GQ:DP        0/1:100:27      0/1:67:16       0/1:100:51
+4      6345206 rs4467645       C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        0/1:100:27      0/1:70:15       0/1:100:74
+13     92605857        rs471379        G       T       .       PASS    AA=T;DP=86      GT:GQ:DP        0/1:100:27      0/1:71:12       0/1:100:42
+1      21511754        rs213010        A       G       .       PASS    AA=G;DP=106;HM2;HM3     GT:GQ:DP        0/1:100:27      0/1:72:18       0/1:100:59
+1      182786253       rs35430213      A       G       .       PASS    AA=A;DP=107     GT:GQ:DP        0/1:100:27      0/1:72:18       0/1:100:63
+8      90014079        .       G       T       .       PASS    AA=G;DP=97      GT:GQ:DP        0/1:100:27      0/1:74:18       0/1:100:48
+14     90234484        rs1742102       C       T       .       PASS    AA=C;DP=112     GT:GQ:DP        0/1:100:27      0/1:76:21       0/1:100:64
+3      100227344       rs2449054       A       C       .       PASS    AA=C;DP=92      GT:GQ:DP        0/1:100:27      0/1:78:16       0/1:100:55
+5      102059819       rs2545558       C       T       .       PASS    AA=C;DP=121     GT:GQ:DP        0/1:100:27      0/1:78:23       0/1:100:57
+12     40120671        rs2733274       A       G       .       PASS    AA=A;DP=106     GT:GQ:DP        0/1:100:27      0/1:82:25       0/1:100:56
+13     109744075       rs9559764       A       G       .       PASS    AA=G;DP=129     GT:GQ:DP        0/1:100:27      0/1:82:30       0/1:100:71
+4      175910719       rs13113891      A       G       .       PASS    AA=A;DP=108     GT:GQ:DP        0/1:100:27      0/1:84:16       0/1:100:67
+9      31080897        rs10970098      A       G       .       PASS    AA=A;DP=109     GT:GQ:DP        0/1:100:27      0/1:85:21       0/1:100:61
+6      12457723        rs6899475       C       T       .       PASS    AA=T;DP=140     GT:GQ:DP        0/1:100:27      0/1:88:26       0/1:100:46
+12     107229032       rs17040378      C       G       .       PASS    AA=C;DP=128     GT:GQ:DP        0/1:100:27      0/1:89:21       0/1:100:41
+4      22684587        rs7699664       A       G       .       PASS    AA=G;DP=96      GT:GQ:DP        0/1:100:27      0/1:90:20       0/1:100:42
+7      118381360       rs4132444       G       T       .       PASS    AA=G;DP=97      GT:GQ:DP        0/1:100:27      0/1:92:22       0/1:100:48
+21     25245217        .       C       G       .       PASS    AA=C;DP=139     GT:GQ:DP        0/1:100:27      0/1:95:28       0/1:100:79
+9      97894860        rs7045648       G       T       .       PASS    AA=T;DP=124     GT:GQ:DP        0/1:100:27      0/1:97:22       0/1:100:77
+2      66872791        .       A       G       .       PASS    AA=A;DP=113     GT:GQ:DP        0/1:100:28      0/1:100:19      0/1:100:67
+2      149686710       rs11888103      A       G       .       PASS    AA=A;DP=96      GT:GQ:DP        0/1:100:28      0/1:100:20      0/1:100:36
+2      176209990       rs10174751      A       T       .       PASS    AA=A;DP=112     GT:GQ:DP        0/1:100:28      0/1:100:20      0/1:100:62
+5      121272983       rs13356688      C       T       .       PASS    AA=T;DP=112     GT:GQ:DP        0/1:100:28      0/1:100:21      0/1:100:60
+18     17890312        rs8090022       C       T       .       PASS    AA=C;DP=123     GT:GQ:DP        0/1:100:28      0/1:100:23      0/1:100:77
+19     11643397        .       A       C       .       PASS    AA=a;DP=77      GT:GQ:DP        0/1:100:28      0/1:100:24      0/1:100:21
+2      1803129 rs6755207       C       T       .       PASS    AA=T;DP=139     GT:GQ:DP        0/1:100:28      0/1:100:24      0/1:100:42
+2      6716571 rs13412007      C       T       .       PASS    AA=T;DP=110     GT:GQ:DP        0/1:100:28      0/1:100:24      0/1:100:58
+12     42280001        rs1478616       C       T       .       PASS    AA=C;DP=129     GT:GQ:DP        0/1:100:28      0/1:100:24      0/1:100:77
+8      89926466        rs17365359      C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        0/1:100:28      0/1:100:25      0/1:100:62
+8      11874764        rs7827305       G       T       .       PASS    AA=T;DP=130     GT:GQ:DP        0/1:100:28      0/1:100:25      0/1:100:78
+7      77778470        rs798286        A       T       .       PASS    AA=A;DP=139     GT:GQ:DP        0/1:100:28      0/1:100:26      0/1:100:40
+5      78312230        rs1717570       A       G       .       PASS    AA=A;DP=98      GT:GQ:DP        0/1:100:28      0/1:100:26      0/1:100:44
+2      29980976        .       C       T       .       PASS    AA=C;DP=108     GT:GQ:DP        0/1:100:28      0/1:100:26      0/1:100:56
+4      131193653       rs10518560      C       G       .       PASS    AA=C;DP=108     GT:GQ:DP        0/1:100:28      0/1:100:27      0/1:100:51
+2      5313080 rs9751581       C       G       .       PASS    AA=G;DP=112     GT:GQ:DP        0/1:100:28      0/1:100:27      0/1:100:55
+9      84806632        rs998119        C       T       .       PASS    AA=T;DP=126     GT:GQ:DP        0/1:100:28      0/1:100:27      0/1:100:67
+8      33974759        .       A       G       .       PASS    AA=A;DP=148     GT:GQ:DP        0/1:100:28      0/1:100:27      0/1:100:86
+8      25158021        rs17053232      C       T       .       PASS    AA=C;DP=129     GT:GQ:DP        0/1:100:28      0/1:100:28      0/1:100:72
+13     45418874        rs9534258       C       G       .       PASS    AA=C;DP=137     GT:GQ:DP        0/1:100:28      0/1:100:28      0/1:100:81
+1      215504627       rs6604663       A       G       .       PASS    AA=G;DP=122;HM2 GT:GQ:DP        0/1:100:28      0/1:100:29      0/1:100:66
+2      231405494       rs60623145      C       T       .       PASS    AA=T;DP=158     GT:GQ:DP        0/1:100:28      0/1:100:29      0/1:100:98
+4      15688833        rs2313731       C       T       .       PASS    AA=C;DP=140     GT:GQ:DP        0/1:100:28      0/1:100:30      0/1:100:82
+3      55715872        rs815427        A       G       .       PASS    AA=G;DP=123     GT:GQ:DP        0/1:100:28      0/1:100:31      0/1:100:64
+3      25378365        rs11917951      C       T       .       PASS    AA=C;DP=94      GT:GQ:DP        0/1:100:28      0/1:17:8        0/1:100:42
+7      128099686       rs11769769      C       T       .       PASS    AA=c;DP=98      GT:GQ:DP        0/1:100:28      0/1:19:12       0/1:100:57
+1      32108685        rs671101        A       G       .       PASS    AA=G;DP=103;HM2;HM3     GT:GQ:DP        0/1:100:28      0/1:21:13       0/1:100:58
+11     24891839        rs10767276      A       G       .       PASS    AA=G;DP=93      GT:GQ:DP        0/1:100:28      0/1:21:22       0/1:100:44
+7      40995424        rs12673875      C       T       .       PASS    AA=T;DP=114     GT:GQ:DP        0/1:100:28      0/1:24:19       0/1:100:68
+7      16426184        rs10464287      A       G       .       PASS    AA=A;DP=93      GT:GQ:DP        0/1:100:28      0/1:28:14       0/1:100:50
+7      125428257       rs1362029       A       T       .       PASS    AA=A;DP=64      GT:GQ:DP        0/1:100:28      0/1:37:9        0/1:5:17
+11     125800409       rs57340642      C       T       .       PASS    AA=C;DP=141     GT:GQ:DP        0/1:100:28      0/1:38:13       0/1:100:59
+11     119989068       rs11603831      C       T       .       PASS    AA=C;DP=114     GT:GQ:DP        0/1:100:28      0/1:45:19       0/1:100:65
+18     54312584        rs4343369       A       T       .       PASS    AA=T;DP=137     GT:GQ:DP        0/1:100:28      0/1:45:32       0/1:100:78
+10     85961257        .       A       G       .       PASS    AA=A;DP=106     GT:GQ:DP        0/1:100:28      0/1:45:9        0/1:100:69
+5      81770493        rs12654907      A       G       .       PASS    AA=A;DP=93      GT:GQ:DP        0/1:100:28      0/1:49:15       0/1:100:49
+19     59740082        rs17606836      C       T       .       PASS    AA=C;DP=90      GT:GQ:DP        0/1:100:28      0/1:54:14       0/1:100:39
+2      127060617       rs10204012      G       T       .       PASS    AA=G;DP=112     GT:GQ:DP        0/1:100:28      0/1:57:15       0/1:100:69
+3      147307168       rs9289716       A       G       .       PASS    AA=A;DP=117     GT:GQ:DP        0/1:100:28      0/1:60:29       0/1:100:61
+13     78992994        rs55887763      C       T       .       PASS    AA=T;DP=97      GT:GQ:DP        0/1:100:28      0/1:64:14       0/1:100:57
+8      15699452        rs429004        C       T       .       PASS    AA=T;DP=141     GT:GQ:DP        0/1:100:28      0/1:67:25       0/1:100:49
+22     39742874        rs8138520       A       G       .       PASS    AA=G;DP=119     GT:GQ:DP        0/1:100:28      0/1:69:18       0/1:100:74
+17     52458209        rs8066030       C       T       .       PASS    AA=C;DP=107     GT:GQ:DP        0/1:100:28      0/1:69:23       0/1:100:58
+5      2761878 rs10046058      A       G       .       PASS    AA=A;DP=102     GT:GQ:DP        0/1:100:28      0/1:6:14        0/1:100:49
+8      40884541        rs6474279       A       T       .       PASS    AA=T;DP=126     GT:GQ:DP        0/1:100:28      0/1:70:23       0/1:100:77
+5      72714919        rs61189560      A       G       .       PASS    AA=A;DP=134     GT:GQ:DP        0/1:100:28      0/1:71:19       0/1:100:86
+3      84039580        rs13061586      A       G       .       PASS    AA=G;DP=140     GT:GQ:DP        0/1:100:28      0/1:72:29       0/1:100:83
+10     24624368        rs387690        C       T       .       PASS    AA=T;DP=127     GT:GQ:DP        0/1:100:28      0/1:74:16       0/1:100:83
+5      15053084        .       A       G       .       PASS    AA=G;DP=99      GT:GQ:DP        0/1:100:28      0/1:75:20       0/1:100:53
+9      27721281        .       A       G       .       PASS    AA=A;DP=138     GT:GQ:DP        0/1:100:28      0/1:75:26       0/1:100:86
+16     5031364 rs1108121       A       G       .       PASS    AA=A;DP=130     GT:GQ:DP        0/1:100:28      0/1:78:21       0/1:100:80
+8      122616451       rs7835355       A       G       .       PASS    AA=G;DP=103     GT:GQ:DP        0/1:100:28      0/1:81:17       0/1:100:57
+7      128208836       .       C       T       .       PASS    AA=C;DP=146     GT:GQ:DP        0/1:100:28      0/1:82:32       0/1:100:86
+4      9798311 rs62285986      A       G       .       PASS    AA=G;DP=127     GT:GQ:DP        0/1:100:28      0/1:83:28       0/1:100:73
+17     14104855        rs7214616       C       G       .       PASS    AA=c;DP=130     GT:GQ:DP        0/1:100:28      0/1:84:20       0/1:100:82
+15     98346693        rs2117805       A       G       .       PASS    AA=G;DP=146     GT:GQ:DP        0/1:100:28      0/1:85:24       0/1:100:96
+7      51034141        rs12719021      A       G       .       PASS    AA=A;DP=125     GT:GQ:DP        0/1:100:28      0/1:87:23       0/1:100:59
+9      121295269       .       C       G       .       PASS    AA=G;DP=151     GT:GQ:DP        0/1:100:28      0/1:87:33       0/1:100:91
+13     39995036        rs9566540       A       T       .       PASS    AA=T;DP=80      GT:GQ:DP        0/1:100:28      0/1:88:17       0/1:100:23
+5      112639669       rs1845289       G       T       .       PASS    AA=G;DP=99      GT:GQ:DP        0/1:100:28      0/1:89:20       0/1:100:44
+2      237609317       rs35943330      A       G       .       PASS    AA=G;DP=119     GT:GQ:DP        0/1:100:28      0/1:90:16       0/1:100:71
+3      43484842        rs7636753       A       T       .       PASS    AA=A;DP=135     GT:GQ:DP        0/1:100:28      0/1:91:30       0/1:100:79
+6      145263862       .       A       G       .       PASS    AA=A;DP=89      GT:GQ:DP        0/1:100:28      0/1:92:16       0/1:100:45
+22     17344821        .       C       T       .       PASS    AA=T;DP=146     GT:GQ:DP        0/1:100:28      0/1:92:27       0/1:100:50
+5      174121527       rs4571489       A       G       .       PASS    AA=A;DP=120     GT:GQ:DP        0/1:100:28      0/1:93:26       0/1:100:66
+18     28610645        rs715401        C       T       .       PASS    AA=c;DP=112     GT:GQ:DP        0/1:100:28      0/1:95:18       0/1:100:67
+3      28410098        rs11924173      A       G       .       PASS    AA=G;DP=99      GT:GQ:DP        0/1:100:28      0/1:96:20       0/1:100:52
+17     65976257        rs10221267      C       T       .       PASS    AA=T;DP=99      GT:GQ:DP        0/1:100:28      0/1:97:16       0/1:100:54
+8      31263340        rs6985426       A       G       .       PASS    AA=A;DP=112     GT:GQ:DP        0/1:100:28      0/1:99:23       0/1:100:49
+14     88591150        .       A       G       .       PASS    AA=G;DP=102     GT:GQ:DP        0/1:100:29      0/1:100:18      0/1:100:56
+18     37674779        rs7504933       C       T       .       PASS    AA=T;DP=116     GT:GQ:DP        0/1:100:29      0/1:100:18      0/1:100:68
+14     19914858        rs1760906       A       G       .       PASS    AA=A;DP=106     GT:GQ:DP        0/1:100:29      0/1:100:19      0/1:100:59
+16     56188336        rs4553621       G       T       .       PASS    AA=G;DP=106     GT:GQ:DP        0/1:100:29      0/1:100:19      0/1:100:60
+11     106954716       rs597836        C       T       .       PASS    AA=C;DP=117     GT:GQ:DP        0/1:100:29      0/1:100:19      0/1:100:71
+13     71690517        rs56658200      A       T       .       PASS    AA=T;DP=80      GT:GQ:DP        0/1:100:29      0/1:100:20      0/1:100:20
+11     45457003        rs4755996       A       G       .       PASS    AA=A;DP=111     GT:GQ:DP        0/1:100:29      0/1:100:20      0/1:100:60
+12     96622180        rs12230660      A       G       .       PASS    AA=a;DP=129     GT:GQ:DP        0/1:100:29      0/1:100:21      0/1:100:82
+3      169205391       rs10936549      C       T       .       PASS    AA=C;DP=116     GT:GQ:DP        0/1:100:29      0/1:100:22      0/1:100:64
+10     77092708        rs7068634       A       G       .       PASS    AA=A;DP=121     GT:GQ:DP        0/1:100:29      0/1:100:22      0/1:100:72
+3      4369767 rs2819565       A       T       .       PASS    AA=T;DP=102     GT:GQ:DP        0/1:100:29      0/1:100:23      0/1:100:51
+9      88475752        rs7860045       A       G       .       PASS    AA=G;DP=136     GT:GQ:DP        0/1:100:29      0/1:100:24      0/1:100:40
+11     41337927        rs12296059      A       G       .       PASS    AA=A;DP=102     GT:GQ:DP        0/1:100:29      0/1:100:24      0/1:100:47
+10     110048791       rs161018        C       T       .       PASS    AA=c;DP=122     GT:GQ:DP        0/1:100:29      0/1:100:24      0/1:100:70
+8      13866037        .       A       G       .       PASS    AA=A;DP=146     GT:GQ:DP        0/1:100:29      0/1:100:24      0/1:100:91
+5      9524319 rs16882862      C       T       .       PASS    AA=C;DP=135     GT:GQ:DP        0/1:100:29      0/1:100:25      0/1:100:41
+6      163435191       rs561216        C       T       .       PASS    AA=T;DP=113     GT:GQ:DP        0/1:100:29      0/1:100:25      0/1:100:58
+4      174584050       rs2086477       A       C       .       PASS    AA=A;DP=113     GT:GQ:DP        0/1:100:29      0/1:100:25      0/1:100:62
+6      32462498        rs1555115       C       G       .       PASS    AA=N;DP=128     GT:GQ:DP        0/1:100:29      0/1:100:25      0/1:100:74
+5      150038068       rs11950324      C       T       .       PASS    AA=T;DP=125     GT:GQ:DP        0/1:100:29      0/1:100:25      0/1:100:76
+8      3868272 rs2688332       C       T       .       PASS    AA=C;DP=106     GT:GQ:DP        0/1:100:29      0/1:100:25      0/1:96:42
+5      170723625       rs7714336       A       C       .       PASS    AA=C;DP=128     GT:GQ:DP        0/1:100:29      0/1:100:26      0/1:100:73
+22     31688708        .       A       G       .       PASS    AA=A;DP=129     GT:GQ:DP        0/1:100:29      0/1:100:27      0/1:100:33
+13     59861350        rs1341837       C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        0/1:100:29      0/1:100:27      0/1:100:59
+18     67506978        .       A       G       .       PASS    AA=a;DP=120     GT:GQ:DP        0/1:100:29      0/1:100:27      0/1:100:63
+8      135002418       rs16905030      C       T       .       PASS    AA=C;DP=148     GT:GQ:DP        0/1:100:29      0/1:100:28      0/1:100:50
+8      127258454       rs4493875       A       C       .       PASS    AA=C;DP=114     GT:GQ:DP        0/1:100:29      0/1:100:28      0/1:100:57
+18     8316208 rs2509543       A       C       .       PASS    AA=A;DP=120     GT:GQ:DP        0/1:100:29      0/1:100:29      0/1:100:60
+6      54602470        rs1280719       A       G       .       PASS    AA=G;DP=130     GT:GQ:DP        0/1:100:29      0/1:100:29      0/1:100:73
+8      96904556        rs568815        A       C       .       PASS    AA=A;DP=149     GT:GQ:DP        0/1:100:29      0/1:100:30      0/1:100:49
+4      102861367       rs7660525       A       G       .       PASS    AA=A;DP=127     GT:GQ:DP        0/1:100:29      0/1:100:30      0/1:100:67
+2      69921368        rs56347203      A       C       .       PASS    AA=A;DP=122     GT:GQ:DP        0/1:100:29      0/1:100:31      0/1:100:62
+6      31410621        rs11968046      C       T       .       PASS    AA=c;DP=143     GT:GQ:DP        0/1:100:29      0/1:100:31      0/1:100:84
+4      23685804        rs6846769       A       C       .       PASS    AA=C;DP=145     GT:GQ:DP        0/1:100:29      0/1:100:32      0/1:100:84
+6      107126573       rs9486410       A       G       .       PASS    AA=G;DP=147     GT:GQ:DP        0/1:100:29      0/1:100:34      0/1:100:44
+2      12604151        rs6716755       C       T       .       PASS    AA=C;DP=130     GT:GQ:DP        0/1:100:29      0/1:100:35      0/1:100:67
+2      169445779       .       A       T       .       PASS    AA=A;DP=157     GT:GQ:DP        0/1:100:29      0/1:100:35      0/1:100:89
+3      192274339       rs1397536       C       G       .       PASS    AA=C;DP=158     GT:GQ:DP        0/1:100:29      0/1:100:41      0/1:100:88
+9      136272892       rs9785244       G       T       .       PASS    AA=t;DP=77      GT:GQ:DP        0/1:100:29      0/1:31:8        0/1:100:41
+22     40639518        rs7292594       C       G       .       PASS    AA=C;DP=126     GT:GQ:DP        0/1:100:29      0/1:35:12       0/1:100:80
+1      117262047       .       C       T       .       PASS    AA=C;DP=123     GT:GQ:DP        0/1:100:29      0/1:38:19       0/1:100:76
+5      149548385       .       C       T       .       PASS    AA=C;DP=140     GT:GQ:DP        0/1:100:29      0/1:38:22       0/1:100:88
+4      40576014        rs16852577      A       G       .       PASS    AA=a;DP=132     GT:GQ:DP        0/1:100:29      0/1:45:24       0/1:100:84
+13     61605368        rs7334518       C       T       .       PASS    AA=T;DP=94      GT:GQ:DP        0/1:100:29      0/1:46:17       0/1:100:48
+12     45821910        rs12578367      C       T       .       PASS    AA=T;DP=124     GT:GQ:DP        0/1:100:29      0/1:46:20       0/1:100:74
+3      66950672        rs7637409       C       T       .       PASS    AA=T;DP=117     GT:GQ:DP        0/1:100:29      0/1:47:14       0/1:100:75
+4      8140498 rs2292739       C       T       .       PASS    AA=C;DP=88      GT:GQ:DP        0/1:100:29      0/1:52:9        0/1:100:50
+1      236569178       rs9428718       A       G       .       PASS    AA=G;DP=89      GT:GQ:DP        0/1:100:29      0/1:53:13       0/1:100:48
+9      32892698        rs13302598      C       T       .       PASS    AA=C;DP=109     GT:GQ:DP        0/1:100:29      0/1:54:16       0/1:100:64
+14     54299073        rs17127918      C       T       .       PASS    AA=T;DP=106     GT:GQ:DP        0/1:100:29      0/1:55:16       0/1:100:61
+11     22646423        rs12280763      A       T       .       PASS    AA=A;DP=109     GT:GQ:DP        0/1:100:29      0/1:57:22       0/1:100:61
+7      4022480 .       A       G       .       PASS    AA=A;DP=104     GT:GQ:DP        0/1:100:29      0/1:60:18       0/1:100:42
+10     11843665        rs10795889      A       G       .       PASS    AA=G;DP=110     GT:GQ:DP        0/1:100:29      0/1:60:18       0/1:100:63
+7      64329621        rs7799516       C       T       .       PASS    AA=N;DP=119     GT:GQ:DP        0/1:100:29      0/1:61:22       0/1:100:70
+9      75967231        rs10869337      C       T       .       PASS    AA=T;DP=114     GT:GQ:DP        0/1:100:29      0/1:61:28       0/1:100:58
+3      154577607       rs9853186       A       G       .       PASS    AA=G;DP=112     GT:GQ:DP        0/1:100:29      0/1:63:23       0/1:100:56
+1      12738259        .       C       T       .       PASS    AA=C;DP=136     GT:GQ:DP        0/1:100:29      0/1:64:14       0/1:100:89
+5      109127456       rs11960588      C       T       .       PASS    AA=C;DP=105     GT:GQ:DP        0/1:100:29      0/1:65:28       0/1:100:39
+1      52482068        rs10888749      C       T       .       PASS    AA=T;DP=144;HM2;HM3     GT:GQ:DP        0/1:100:29      0/1:69:24       0/1:100:93
+17     69252454        rs2683179       A       G       .       PASS    AA=G;DP=136     GT:GQ:DP        0/1:100:29      0/1:72:29       0/1:100:75
+11     40329821        rs1303849       A       G       .       PASS    AA=A;DP=101     GT:GQ:DP        0/1:100:29      0/1:73:19       0/1:100:52
+6      14783669        rs59779763      C       T       .       PASS    AA=C;DP=132     GT:GQ:DP        0/1:100:29      0/1:76:25       0/1:100:78
+6      162711724       rs12205958      C       G       .       PASS    AA=G;DP=140     GT:GQ:DP        0/1:100:29      0/1:76:30       0/1:100:73
+11     105446968       rs6591150       A       T       .       PASS    AA=T;DP=108     GT:GQ:DP        0/1:100:29      0/1:81:17       0/1:100:65
+1      159496275       rs4078109       A       G       .       PASS    AA=A;DP=150;HM2;HM3     GT:GQ:DP        0/1:100:29      0/1:81:32       0/1:100:47
+10     114460494       rs7919503       A       G       .       PASS    AA=A;DP=128     GT:GQ:DP        0/1:100:29      0/1:85:22       0/1:100:81
+11     115962860       rs10790152      A       G       .       PASS    AA=a;DP=140     GT:GQ:DP        0/1:100:29      0/1:85:22       0/1:100:93
+8      138226540       rs11778090      A       C       .       PASS    AA=C;DP=127     GT:GQ:DP        0/1:100:29      0/1:85:25       0/1:100:72
+1      34173302        rs10799011      A       G       .       PASS    AA=G;DP=136     GT:GQ:DP        0/1:100:29      0/1:86:19       0/1:100:89
+14     94045336        rs17094914      C       G       .       PASS    AA=C;DP=107     GT:GQ:DP        0/1:100:29      0/1:88:15       0/1:100:63
+14     106226318       rs35923687      A       G       .       PASS    AA=a;DP=103     GT:GQ:DP        0/1:100:29      0/1:88:23       0/1:100:51
+2      80233864        rs11678577      C       G       .       PASS    AA=C;DP=110     GT:GQ:DP        0/1:100:29      0/1:88:24       0/1:100:57
+16     60610561        rs968627        A       G       .       PASS    AA=G;DP=119     GT:GQ:DP        0/1:100:29      0/1:92:17       0/1:100:73
+8      20490621        rs60455912      A       T       .       PASS    AA=T;DP=117     GT:GQ:DP        0/1:100:29      0/1:92:25       0/1:100:65
+8      105286277       rs2441909       G       T       .       PASS    AA=G;DP=128     GT:GQ:DP        0/1:100:29      0/1:94:24       0/1:100:79
+14     43255781        .       A       C       .       PASS    AA=A;DP=100     GT:GQ:DP        0/1:100:29      0/1:95:16       0/1:100:55
+7      32426749        rs10269253      C       T       .       PASS    AA=C;DP=122     GT:GQ:DP        0/1:100:29      0/1:95:22       0/1:100:74
+14     100915596       rs1953237       A       T       .       PASS    AA=A;DP=84      GT:GQ:DP        0/1:100:29      0/1:96:16       0/1:100:31
+1      57106347        rs601662        A       G       .       PASS    AA=G;DP=106;HM2;HM3     GT:GQ:DP        0/1:100:29      0/1:96:20       0/1:100:58
+3      142838386       rs9824515       A       G       .       PASS    AA=A;DP=131     GT:GQ:DP        0/1:100:29      0/1:97:18       0/1:100:84
+4      116207336       rs531435        A       T       .       PASS    AA=A;DP=150     GT:GQ:DP        0/1:100:29      0/1:97:30       0/1:100:44
+7      98570668        rs10271953      A       G       .       PASS    AA=A;DP=97      GT:GQ:DP        0/1:100:30      0/1:100:19      0/1:100:34
+1      158702829       rs2118423       C       T       .       PASS    AA=C;DP=118     GT:GQ:DP        0/1:100:30      0/1:100:21      0/1:100:68
+12     66598513        rs2192783       A       T       .       PASS    AA=T;DP=138     GT:GQ:DP        0/1:100:30      0/1:100:21      0/1:100:82
+6      95069329        .       A       T       .       PASS    AA=T;DP=116     GT:GQ:DP        0/1:100:30      0/1:100:22      0/1:100:65
+9      131948609       rs35587836      C       T       .       PASS    AA=C;DP=132     GT:GQ:DP        0/1:100:30      0/1:100:23      0/1:100:37
+4      78457124        rs4859801       A       G       .       PASS    AA=a;DP=136     GT:GQ:DP        0/1:100:30      0/1:100:23      0/1:100:41
+9      23683918        rs1329027       A       G       .       PASS    AA=A;DP=101     GT:GQ:DP        0/1:100:30      0/1:100:23      0/1:100:48
+5      50500877        rs4392588       A       G       .       PASS    AA=A;DP=115     GT:GQ:DP        0/1:100:30      0/1:100:23      0/1:100:61
+7      158798340       .       C       T       .       PASS    AA=.;DP=120     GT:GQ:DP        0/1:100:30      0/1:100:23      0/1:100:68
+2      33868333        rs11892198      A       G       .       PASS    AA=G;DP=126     GT:GQ:DP        0/1:100:30      0/1:100:23      0/1:100:74
+7      139946385       .       C       G       .       PASS    AA=c;DP=129     GT:GQ:DP        0/1:100:30      0/1:100:23      0/1:100:76
+7      36486176        rs6954205       C       T       .       PASS    AA=T;DP=124     GT:GQ:DP        0/1:100:30      0/1:100:24      0/1:100:72
+12     92643179        .       A       G       .       PASS    AA=A;DP=122     GT:GQ:DP        0/1:100:30      0/1:100:25      0/1:100:65
+8      53538312        rs3906806       A       G       .       PASS    AA=A;DP=144     GT:GQ:DP        0/1:100:30      0/1:100:25      0/1:100:68
+10     29378073        .       C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        0/1:100:30      0/1:100:25      0/1:100:69
+16     5537475 rs1486429       A       G       .       PASS    AA=A;DP=124     GT:GQ:DP        0/1:100:30      0/1:100:26      0/1:100:67
+6      138052844       rs12525643      A       G       .       PASS    AA=A;DP=122     GT:GQ:DP        0/1:100:30      0/1:100:26      0/1:100:67
+9      134352781       rs471186        C       T       .       PASS    AA=T;DP=125     GT:GQ:DP        0/1:100:30      0/1:100:26      0/1:100:67
+20     10947320        rs60840161      C       T       .       PASS    AA=c;DP=103     GT:GQ:DP        0/1:100:30      0/1:100:27      0/1:100:35
+7      131407567       rs34036124      A       G       .       PASS    AA=A;DP=133     GT:GQ:DP        0/1:100:30      0/1:100:27      0/1:100:37
+6      138007580       rs4896289       C       G       .       PASS    AA=C;DP=115     GT:GQ:DP        0/1:100:30      0/1:100:27      0/1:100:59
+7      97577854        rs10499940      A       G       .       PASS    AA=A;DP=126     GT:GQ:DP        0/1:100:30      0/1:100:27      0/1:100:69
+13     77534792        rs2775139       C       T       .       PASS    AA=C;DP=129     GT:GQ:DP        0/1:100:30      0/1:100:27      0/1:100:74
+7      111237017       rs2188797       C       T       .       PASS    AA=T;DP=119     GT:GQ:DP        0/1:100:30      0/1:100:28      0/1:100:59
+20     24458675        rs62215287      A       C       .       PASS    AA=N;DP=115     GT:GQ:DP        0/1:100:30      0/1:100:29      0/1:100:60
+3      90178855        .       C       G       .       PASS    AA=G;DP=139     GT:GQ:DP        0/1:100:30      0/1:100:29      0/1:100:80
+3      6017772 .       A       G       .       PASS    AA=G;DP=126     GT:GQ:DP        0/1:100:30      0/1:100:30      0/1:100:65
+6      124370716       rs1104940       A       G       .       PASS    AA=A;DP=119     GT:GQ:DP        0/1:100:30      0/1:100:31      0/1:100:59
+11     21426069        .       A       T       .       PASS    AA=A;DP=135     GT:GQ:DP        0/1:100:30      0/1:100:32      0/1:100:74
+11     113308144       rs1176745       C       T       .       PASS    AA=C;DP=139     GT:GQ:DP        0/1:100:30      0/1:100:32      0/1:100:77
+9      28657293        rs13291753      A       T       .       PASS    AA=A;DP=141     GT:GQ:DP        0/1:100:30      0/1:100:33      0/1:100:29
+1      64527392        rs17126280      G       T       .       PASS    AA=G;DP=138     GT:GQ:DP        0/1:100:30      0/1:100:34      0/1:100:76
+9      125300266       rs10986029      C       G       .       PASS    AA=C;DP=133     GT:GQ:DP        0/1:100:30      0/1:100:37      0/1:100:68
+2      119247562       .       A       G       .       PASS    AA=G;DP=116     GT:GQ:DP        0/1:100:30      0/1:43:17       0/1:100:70
+11     86065299        rs10792873      A       G       .       PASS    AA=A;DP=155     GT:GQ:DP        0/1:100:30      0/1:49:28       0/1:100:57
+1      3685915 rs10909790      C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        0/1:100:30      0/1:53:15       0/1:100:52
+1      45860466        rs3014241       A       G       .       PASS    AA=G;DP=137;HM2;HM3     GT:GQ:DP        0/1:100:30      0/1:61:20       0/1:100:86
+14     30217249        rs10139154      C       T       .       PASS    AA=T;DP=104     GT:GQ:DP        0/1:100:30      0/1:63:13       0/1:100:58
+3      118094521       rs9682531       G       T       .       PASS    AA=T;DP=119     GT:GQ:DP        0/1:100:30      0/1:65:19       0/1:100:62
+5      112603823       rs12188069      A       G       .       PASS    AA=G;DP=100     GT:GQ:DP        0/1:100:30      0/1:67:12       0/1:100:59
+7      26427041        rs1919937       C       G       .       PASS    AA=C;DP=122     GT:GQ:DP        0/1:100:30      0/1:68:24       0/1:100:69
+19     21532928        rs1401927       C       T       .       PASS    AA=c;DP=120     GT:GQ:DP        0/1:100:30      0/1:69:23       0/1:100:68
+17     1887798 rs12451788      A       G       .       PASS    AA=N;DP=148     GT:GQ:DP        0/1:100:30      0/1:70:29       0/1:100:52
+9      116202074       rs10759693      C       T       .       PASS    AA=T;DP=137     GT:GQ:DP        0/1:100:30      0/1:79:20       0/1:100:89
+9      1554650 .       A       G       .       PASS    AA=G;DP=98      GT:GQ:DP        0/1:100:30      0/1:80:16       0/1:100:53
+6      25058578        rs7759489       C       T       .       PASS    AA=c;DP=121     GT:GQ:DP        0/1:100:30      0/1:80:16       0/1:100:77
+4      68595851        rs6817194       A       C       .       PASS    AA=A;DP=122     GT:GQ:DP        0/1:100:30      0/1:80:22       0/1:100:29
+5      112749984       rs12523255      C       T       .       PASS    AA=C;DP=121     GT:GQ:DP        0/1:100:30      0/1:81:15       0/1:100:76
+16     83469773        rs903188        C       T       .       PASS    AA=T;DP=121     GT:GQ:DP        0/1:100:30      0/1:82:24       0/1:100:66
+18     41925238        rs1800639       G       T       .       PASS    AA=G;DP=145     GT:GQ:DP        0/1:100:30      0/1:82:26       0/1:100:44
+1      46551961        .       A       T       .       PASS    AA=T;DP=112     GT:GQ:DP        0/1:100:30      0/1:82:26       0/1:100:58
+13     75422378        rs1934824       A       G       .       PASS    AA=A;DP=143     GT:GQ:DP        0/1:100:30      0/1:82:31       0/1:100:83
+3      116915785       rs283364        A       G       .       PASS    AA=G;DP=116     GT:GQ:DP        0/1:100:30      0/1:86:27       0/1:100:61
+2      155030329       rs707104        A       C       .       PASS    AA=A;DP=144     GT:GQ:DP        0/1:100:30      0/1:86:28       0/1:100:86
+7      109419154       rs10046505      C       T       .       PASS    AA=T;DP=122     GT:GQ:DP        0/1:100:30      0/1:88:27       0/1:100:66
+10     59934482        rs2033150       C       T       .       PASS    AA=C;DP=119     GT:GQ:DP        0/1:100:30      0/1:90:27       0/1:100:59
+4      25317328        rs13107598      A       G       .       PASS    AA=A;DP=95      GT:GQ:DP        0/1:100:30      0/1:93:17       0/1:100:49
+18     45628481        rs591173        C       T       .       PASS    AA=T;DP=149     GT:GQ:DP        0/1:100:30      0/1:94:27       0/1:100:93
+5      60971948        rs10514913      C       T       .       PASS    AA=T;DP=111     GT:GQ:DP        0/1:100:30      0/1:96:18       0/1:100:63
+8      138035595       rs1499460       A       G       .       PASS    AA=G;DP=113     GT:GQ:DP        0/1:100:30      0/1:98:23       0/1:100:58
+18     20205740        rs581885        A       G       .       PASS    AA=G;DP=124     GT:GQ:DP        0/1:100:30      0/1:99:17       0/1:100:80
+1      20777795        rs7554360       C       T       .       PASS    AA=C;DP=128;HM2;HM3     GT:GQ:DP        0/1:100:31      0/1:100:17      0/1:100:82
+2      72236097        rs6738942       A       G       .       PASS    AA=N;DP=117     GT:GQ:DP        0/1:100:31      0/1:100:18      0/1:100:69
+4      174287355       rs28735865      C       T       .       PASS    AA=C;DP=114     GT:GQ:DP        0/1:100:31      0/1:100:20      0/1:100:62
+3      58345217        rs6445975       G       T       .       PASS    AA=T;DP=127     GT:GQ:DP        0/1:100:31      0/1:100:20      0/1:100:76
+12     41078234        .       C       G       .       PASS    AA=C;DP=110     GT:GQ:DP        0/1:100:31      0/1:100:21      0/1:100:57
+18     1208635 rs1812571       A       C       .       PASS    AA=A;DP=109     GT:GQ:DP        0/1:100:31      0/1:100:22      0/1:100:52
+15     49443612        rs60420999      A       T       .       PASS    AA=T;DP=107     GT:GQ:DP        0/1:100:31      0/1:100:22      0/1:100:56
+12     116681563       rs10744902      A       G       .       PASS    AA=A;DP=124     GT:GQ:DP        0/1:100:31      0/1:100:22      0/1:100:75
+5      67245739        rs13172285      G       T       .       PASS    AA=G;DP=139     GT:GQ:DP        0/1:100:31      0/1:100:22      0/1:100:84
+4      93045233        rs7675570       A       G       .       PASS    AA=G;DP=118     GT:GQ:DP        0/1:100:31      0/1:100:23      0/1:100:63
+12     123885408       .       C       T       .       PASS    AA=C;DP=128     GT:GQ:DP        0/1:100:31      0/1:100:23      0/1:100:77
+3      195561328       .       C       T       .       PASS    AA=C;DP=112     GT:GQ:DP        0/1:100:31      0/1:100:24      0/1:100:58
+13     62759421        rs60070486      C       T       .       PASS    AA=c;DP=119     GT:GQ:DP        0/1:100:31      0/1:100:24      0/1:100:66
+4      14355777        rs6449074       C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        0/1:100:31      0/1:100:24      0/1:100:67
+6      142483143       rs2842761       C       T       .       PASS    AA=T;DP=139     GT:GQ:DP        0/1:100:31      0/1:100:24      0/1:100:68
+7      68380429        rs1568630       C       T       .       PASS    AA=T;DP=143     GT:GQ:DP        0/1:100:31      0/1:100:25      0/1:100:91
+10     43481149        .       A       G       .       PASS    AA=A;DP=102     GT:GQ:DP        0/1:100:31      0/1:100:26      0/1:100:46
+10     13859398        rs11258596      A       G       .       PASS    AA=G;DP=133     GT:GQ:DP        0/1:100:31      0/1:100:26      0/1:100:76
+10     86694671        rs10887406      C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        0/1:100:31      0/1:100:27      0/1:100:49
+6      80518169        rs9443701       A       G       .       PASS    AA=G;DP=116     GT:GQ:DP        0/1:100:31      0/1:100:28      0/1:100:58
+20     52447406        rs1923118       A       G       .       PASS    AA=A;DP=138     GT:GQ:DP        0/1:100:31      0/1:100:28      0/1:100:78
+3      133080508       rs9289405       A       G       .       PASS    AA=G;DP=139     GT:GQ:DP        0/1:100:31      0/1:100:28      0/1:100:78
+3      170337296       rs35601116      A       T       .       PASS    AA=A;DP=110     GT:GQ:DP        0/1:100:31      0/1:100:30      0/1:100:46
+16     26568164        .       A       T       .       PASS    AA=T;DP=138     GT:GQ:DP        0/1:100:31      0/1:100:30      0/1:100:77
+8      62855544        rs1908457       C       G       .       PASS    AA=C;DP=160     GT:GQ:DP        0/1:100:31      0/1:100:31      0/1:100:53
+7      92604287        .       A       G       .       PASS    AA=A;DP=139     GT:GQ:DP        0/1:100:31      0/1:100:32      0/1:100:71
+11     68064334        .       A       C       .       PASS    AA=-;DP=139     GT:GQ:DP        0/1:100:31      0/1:100:33      0/1:100:76
+2      68732960        rs4467308       A       G       .       PASS    AA=G;DP=147     GT:GQ:DP        0/1:100:31      0/1:100:35      0/1:100:81
+1      58678090        rs706432        C       G       .       PASS    AA=G;DP=170     GT:GQ:DP        0/1:100:31      0/1:100:42      0/1:100:52
+2      151400417       rs10084284      G       T       .       PASS    AA=G;DP=134     GT:GQ:DP        0/1:100:31      0/1:100:42      0/1:100:61
+5      31007717        rs1276145       A       G       .       PASS    AA=A;DP=129     GT:GQ:DP        0/1:100:31      0/1:12:18       0/1:100:81
+19     56007784        .       C       T       .       PASS    AA=C;DP=116     GT:GQ:DP        0/1:100:31      0/1:19:18       0/1:100:66
+10     105227189       rs12263619      C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        0/1:100:31      0/1:25:18       0/1:100:71
+17     1033297 .       G       T       .       PASS    AA=G;DP=116     GT:GQ:DP        0/1:100:31      0/1:31:20       0/1:100:65
+5      115480930       rs4460169       C       T       .       PASS    AA=T;DP=116     GT:GQ:DP        0/1:100:31      0/1:34:22       0/1:100:62
+X      2431076 rs4379602       A       T       .       PASS    AA=.;DP=95      GT:GQ:DP        0/1:100:31      0/1:39:21       0/1:100:38
+3      111714801       rs9846566       C       T       .       PASS    AA=C;DP=118     GT:GQ:DP        0/1:100:31      0/1:40:17       0/1:100:72
+3      21325243        rs2118119       C       T       .       PASS    AA=C;DP=117     GT:GQ:DP        0/1:100:31      0/1:47:20       0/1:100:67
+4      19063014        rs10034324      A       G       .       PASS    AA=G;DP=99      GT:GQ:DP        0/1:100:31      0/1:51:20       0/1:100:48
+13     69568108        rs9572369       C       T       .       PASS    AA=N;DP=104     GT:GQ:DP        0/1:100:31      0/1:53:15       0/1:100:55
+12     2385405 rs2159059       C       G       .       PASS    AA=C;DP=109     GT:GQ:DP        0/1:100:31      0/1:53:24       0/1:100:54
+11     124738350       .       C       T       .       PASS    AA=T;DP=109     GT:GQ:DP        0/1:100:31      0/1:59:18       0/1:100:48
+16     1262133 rs9923479       C       G       .       PASS    AA=G;DP=120     GT:GQ:DP        0/1:100:31      0/1:60:16       0/1:100:74
+3      104778074       rs9853928       C       T       .       PASS    AA=N;DP=107     GT:GQ:DP        0/1:100:31      0/1:66:22       0/1:100:54
+18     30627470        rs1480439       C       G       .       PASS    AA=C;DP=115     GT:GQ:DP        0/1:100:31      0/1:68:23       0/1:100:58
+17     32337767        rs11659128      C       T       .       PASS    AA=C;DP=106     GT:GQ:DP        0/1:100:31      0/1:71:19       0/1:100:43
+22     32914092        rs4820144       A       T       .       PASS    AA=A;DP=132     GT:GQ:DP        0/1:100:31      0/1:71:25       0/1:100:79
+4      767597  rs7655941       A       G       .       PASS    AA=G;DP=119     GT:GQ:DP        0/1:100:31      0/1:75:16       0/1:100:70
+12     121272177       rs60425908      A       G       .       PASS    AA=A;DP=131     GT:GQ:DP        0/1:100:31      0/1:75:24       0/1:100:76
+9      15744631        rs10810440      A       G       .       PASS    AA=A;DP=122     GT:GQ:DP        0/1:100:31      0/1:81:29       0/1:100:63
+6      46482485        .       A       G       .       PASS    AA=A;DP=118     GT:GQ:DP        0/1:100:31      0/1:84:20       0/1:100:67
+10     3045734 rs7898870       C       T       .       PASS    AA=c;DP=147     GT:GQ:DP        0/1:100:31      0/1:84:23       0/1:100:47
+16     85419240        .       A       G       .       PASS    AA=A;DP=131     GT:GQ:DP        0/1:100:31      0/1:85:28       0/1:100:70
+5      79972555        rs966762        A       T       .       PASS    AA=A;DP=109     GT:GQ:DP        0/1:100:31      0/1:87:19       0/1:100:61
+21     19805361        rs8128540       C       T       .       PASS    AA=c;DP=104     GT:GQ:DP        0/1:100:31      0/1:88:13       0/1:100:60
+8      121438612       rs11782639      A       G       .       PASS    AA=A;DP=121     GT:GQ:DP        0/1:100:31      0/1:91:16       0/1:100:73
+4      58956677        rs13105750      C       T       .       PASS    AA=C;DP=119     GT:GQ:DP        0/1:100:31      0/1:93:16       0/1:100:70
+7      93377426        rs180270        A       T       .       PASS    AA=A;DP=116     GT:GQ:DP        0/1:100:31      0/1:95:16       0/1:100:71
+3      56004744        rs2125244       A       T       .       PASS    AA=A;DP=105     GT:GQ:DP        0/1:100:31      0/1:95:22       0/1:100:54
+5      175134670       rs11749986      A       G       .       PASS    AA=G;DP=124     GT:GQ:DP        0/1:100:31      0/1:95:22       0/1:100:71
+3      89198193        rs58958639      C       T       .       PASS    AA=T;DP=114     GT:GQ:DP        0/1:100:31      0/1:96:22       0/1:100:63
+2      55478968        rs2867179       C       T       .       PASS    AA=C;DP=96      GT:GQ:DP        0/1:100:32      0/1:100:16      0/1:100:48
+16     5731248 rs62014079      A       G       .       PASS    AA=A;DP=106     GT:GQ:DP        0/1:100:32      0/1:100:18      0/1:100:58
+8      125293612       .       C       T       .       PASS    AA=C;DP=130     GT:GQ:DP        0/1:100:32      0/1:100:21      0/1:100:78
+8      80742605        rs60352938      A       C       .       PASS    AA=A;DP=116     GT:GQ:DP        0/1:100:32      0/1:100:22      0/1:100:63
+7      102510323       rs11981558      A       G       .       PASS    AA=G;DP=100     GT:GQ:DP        0/1:100:32      0/1:100:23      0/1:100:33
+1      152855856       rs9427104       C       T       .       PASS    AA=C;DP=125;HM2 GT:GQ:DP        0/1:100:32      0/1:100:23      0/1:100:72
+2      182359979       rs10179363      A       G       .       PASS    AA=G;DP=154     GT:GQ:DP        0/1:100:32      0/1:100:24      0/1:100:57
+3      73107299        rs1108154       A       T       .       PASS    AA=A;DP=119     GT:GQ:DP        0/1:100:32      0/1:100:24      0/1:100:65
+5      142396198       rs11956059      C       T       .       PASS    AA=C;DP=122     GT:GQ:DP        0/1:100:32      0/1:100:24      0/1:100:68
+9      71000512        rs17062237      C       T       .       PASS    AA=c;DP=118     GT:GQ:DP        0/1:100:32      0/1:100:25      0/1:100:48
+4      139805023       rs6823417       C       T       .       PASS    AA=c;DP=121     GT:GQ:DP        0/1:100:32      0/1:100:25      0/1:100:64
+20     17439618        rs6080728       C       T       .       PASS    AA=T;DP=121     GT:GQ:DP        0/1:100:32      0/1:100:25      0/1:100:66
+13     112687134       rs1320523       A       G       .       PASS    AA=G;DP=124     GT:GQ:DP        0/1:100:32      0/1:100:25      0/1:100:67
+16     20293275        .       C       G       .       PASS    AA=c;DP=123     GT:GQ:DP        0/1:100:32      0/1:100:25      0/1:100:67
+2      191240982       rs2159819       C       G       .       PASS    AA=G;DP=110     GT:GQ:DP        0/1:100:32      0/1:100:26      0/1:100:54
+10     1648534 rs11250669      C       T       .       PASS    AA=C;DP=116     GT:GQ:DP        0/1:100:32      0/1:100:26      0/1:100:58
+5      118473498       .       C       G       .       PASS    AA=C;DP=117     GT:GQ:DP        0/1:100:32      0/1:100:26      0/1:100:60
+13     39353021        rs4943708       C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        0/1:100:32      0/1:100:26      0/1:100:61
+3      192483128       rs10937469      A       G       .       PASS    AA=A;DP=131     GT:GQ:DP        0/1:100:32      0/1:100:27      0/1:100:70
+6      57467918        .       C       T       .       PASS    AA=c;DP=148     GT:GQ:DP        0/1:100:32      0/1:100:27      0/1:100:75
+4      78422819        rs11732260      A       G       .       PASS    AA=N;DP=163     GT:GQ:DP        0/1:100:32      0/1:100:29      0/1:100:46
+7      96305513        rs12535698      C       T       .       PASS    AA=C;DP=137     GT:GQ:DP        0/1:100:32      0/1:100:29      0/1:100:78
+10     80155049        rs9663663       C       T       .       PASS    AA=c;DP=138     GT:GQ:DP        0/1:100:32      0/1:100:31      0/1:100:74
+9      7091417 rs12343768      C       T       .       PASS    AA=C;DP=153     GT:GQ:DP        0/1:100:32      0/1:100:32      0/1:100:40
+5      132398865       rs7728724       G       T       .       PASS    AA=G;DP=150     GT:GQ:DP        0/1:100:32      0/1:100:34      0/1:100:44
+12     48121998        rs11169017      A       G       .       PASS    AA=a;DP=133     GT:GQ:DP        0/1:100:32      0/1:100:37      0/1:100:64
+6      99717657        rs7773562       C       G       .       PASS    AA=C;DP=164     GT:GQ:DP        0/1:100:32      0/1:100:37      0/1:100:93
+19     592893  rs11085150      A       T       .       PASS    AA=A;DP=96      GT:GQ:DP        0/1:100:32      0/1:16:5        0/1:100:58
+2      12139730        rs12465663      C       G       .       PASS    AA=G;DP=111     GT:GQ:DP        0/1:100:32      0/1:28:18       0/1:100:61
+10     72371050        rs1466575       C       T       .       PASS    AA=T;DP=116     GT:GQ:DP        0/1:100:32      0/1:37:16       0/1:100:69
+3      188428306       .       A       G       .       PASS    AA=A;DP=97      GT:GQ:DP        0/1:100:32      0/1:54:22       0/1:100:32
+19     56498047        rs59736370      C       T       .       PASS    AA=C;DP=98      GT:GQ:DP        0/1:100:32      0/1:55:17       0/1:100:45
+9      36870256        rs10119448      C       T       .       PASS    AA=C;DP=119     GT:GQ:DP        0/1:100:32      0/1:60:14       0/1:100:71
+20     15432778        .       A       G       .       PASS    AA=G;DP=96      GT:GQ:DP        0/1:100:32      0/1:63:14       0/1:100:50
+12     40260526        rs55792075      C       T       .       PASS    AA=C;DP=124     GT:GQ:DP        0/1:100:32      0/1:64:15       0/1:100:76
+2      125035019       rs6720106       A       C       .       PASS    AA=a;DP=113     GT:GQ:DP        0/1:100:32      0/1:65:14       0/1:100:68
+14     102687562       rs4906279       A       C       .       PASS    AA=C;DP=121     GT:GQ:DP        0/1:100:32      0/1:65:18       0/1:100:70
+14     52987035        rs1954302       A       T       .       PASS    AA=T;DP=118     GT:GQ:DP        0/1:100:32      0/1:68:22       0/1:100:67
+10     8546235 rs7907707       C       T       .       PASS    AA=T;DP=117     GT:GQ:DP        0/1:100:32      0/1:74:26       0/1:100:60
+4      55602147        rs6820371       C       T       .       PASS    AA=C;DP=118     GT:GQ:DP        0/1:100:32      0/1:77:24       0/1:100:65
+13     42420017        rs58019346      G       T       .       PASS    AA=G;DP=139     GT:GQ:DP        0/1:100:32      0/1:77:25       0/1:100:85
+8      2922991 rs11993468      C       T       .       PASS    AA=T;DP=122     GT:GQ:DP        0/1:100:32      0/1:79:20       0/1:100:69
+19     16704379        rs12975018      C       G       .       PASS    AA=G;DP=114     GT:GQ:DP        0/1:100:32      0/1:79:26       0/1:100:56
+8      24420370        .       C       T       .       PASS    AA=C;DP=112     GT:GQ:DP        0/1:100:32      0/1:81:21       0/1:100:63
+10     75371861        rs4746158       A       G       .       PASS    AA=a;DP=120     GT:GQ:DP        0/1:100:32      0/1:83:22       0/1:100:67
+9      97777358        rs4743436       C       T       .       PASS    AA=C;DP=153     GT:GQ:DP        0/1:100:32      0/1:87:34       0/1:100:46
+1      155463246       rs7549223       C       T       .       PASS    AA=T;DP=130     GT:GQ:DP        0/1:100:32      0/1:88:20       0/1:100:74
+16     48315591        rs8050003       A       G       .       PASS    AA=G;DP=110     GT:GQ:DP        0/1:100:32      0/1:89:20       0/1:100:60
+3      58963188        rs9817881       C       T       .       PASS    AA=T;DP=118     GT:GQ:DP        0/1:100:32      0/1:89:29       0/1:100:56
+12     39881547        rs1431106       C       T       .       PASS    AA=T;DP=124     GT:GQ:DP        0/1:100:32      0/1:90:20       0/1:100:71
+13     47876146        rs198609        A       G       .       PASS    AA=A;DP=128     GT:GQ:DP        0/1:100:32      0/1:93:20       0/1:100:76
+5      673486  rs16900931      G       T       .       PASS    AA=G;DP=143     GT:GQ:DP        0/1:100:32      0/1:95:24       0/1:100:89
+2      209895733       rs7576085       C       T       .       PASS    AA=C;DP=117     GT:GQ:DP        0/1:100:32      0/1:99:24       0/1:100:61
+21     19567443        rs2825474       A       C       .       PASS    AA=C;DP=120     GT:GQ:DP        0/1:100:32      0/1:99:26       0/1:100:62
+12     113414333       rs60147285      A       G       .       PASS    AA=A;DP=123     GT:GQ:DP        0/1:100:33      0/1:100:19      0/1:100:74
+16     5797738 rs17138676      C       G       .       PASS    AA=C;DP=146     GT:GQ:DP        0/1:100:33      0/1:100:20      0/1:100:91
+1      189156800       rs11811419      A       T       .       PASS    AA=A;DP=120;HM2 GT:GQ:DP        0/1:100:33      0/1:100:21      0/1:100:65
+3      181224144       rs6800787       C       T       .       PASS    AA=C;DP=127     GT:GQ:DP        0/1:100:33      0/1:100:21      0/1:100:76
+3      107806340       .       A       G       .       PASS    AA=A;DP=136     GT:GQ:DP        0/1:100:33      0/1:100:22      0/1:100:78
+5      89866212        rs679568        A       T       .       PASS    AA=T;DP=115     GT:GQ:DP        0/1:100:33      0/1:100:23      0/1:100:61
+16     27152587        rs11641348      G       T       .       PASS    AA=T;DP=123     GT:GQ:DP        0/1:100:33      0/1:100:23      0/1:100:67
+6      52128038        rs6917607       C       T       .       PASS    AA=C;DP=124     GT:GQ:DP        0/1:100:33      0/1:100:24      0/1:100:67
+8      129519407       rs4733610       G       T       .       PASS    AA=G;DP=103     GT:GQ:DP        0/1:100:33      0/1:100:25      0/1:100:45
+4      186256723       rs13120942      A       T       .       PASS    AA=A;DP=147     GT:GQ:DP        0/1:100:33      0/1:100:25      0/1:100:80
+11     76035492        rs4944113       A       T       .       PASS    AA=T;DP=124     GT:GQ:DP        0/1:100:33      0/1:100:26      0/1:100:66
+14     80960811        rs58856082      C       T       .       PASS    AA=C;DP=136     GT:GQ:DP        0/1:100:33      0/1:100:26      0/1:100:74
+18     61674946        rs4468726       C       T       .       PASS    AA=C;DP=142     GT:GQ:DP        0/1:100:33      0/1:100:26      0/1:100:82
+3      193225330       rs11927557      A       T       .       PASS    AA=A;DP=149     GT:GQ:DP        0/1:100:33      0/1:100:27      0/1:100:46
+18     1092114 rs7242655       C       T       .       PASS    AA=C;DP=128     GT:GQ:DP        0/1:100:33      0/1:100:27      0/1:100:69
+2      173072631       rs5015856       C       T       .       PASS    AA=T;DP=134     GT:GQ:DP        0/1:100:33      0/1:100:27      0/1:100:73
+16     7799445 rs9923884       A       G       .       PASS    AA=G;DP=123     GT:GQ:DP        0/1:100:33      0/1:100:28      0/1:100:62
+1      160198162       rs2499850       G       T       .       PASS    AA=T;DP=133     GT:GQ:DP        0/1:100:33      0/1:100:28      0/1:100:72
+5      41030966        .       C       T       .       PASS    AA=T;DP=137     GT:GQ:DP        0/1:100:33      0/1:100:28      0/1:100:75
+17     42181223        rs9896243       C       G       .       PASS    AA=G;DP=129     GT:GQ:DP        0/1:100:33      0/1:100:29      0/1:100:65
+20     48418018        rs58843788      C       T       .       PASS    AA=C;DP=131     GT:GQ:DP        0/1:100:33      0/1:100:30      0/1:100:70
+12     127188580       rs7299858       A       G       .       PASS    AA=A;DP=147     GT:GQ:DP        0/1:100:33      0/1:100:30      0/1:100:83
+10     25483065        rs57601269      A       C       .       PASS    AA=A;DP=123     GT:GQ:DP        0/1:100:33      0/1:100:32      0/1:100:58
+8      73097593        rs10085964      C       T       .       PASS    AA=T;DP=132     GT:GQ:DP        0/1:100:33      0/1:100:32      0/1:100:66
+5      55750624        rs286017        A       T       .       PASS    AA=A;DP=146     GT:GQ:DP        0/1:100:33      0/1:100:32      0/1:100:75
+13     108260337       rs196181        A       G       .       PASS    AA=A;DP=156     GT:GQ:DP        0/1:100:33      0/1:100:32      0/1:100:94
+11     5572987 rs7106976       C       T       .       PASS    AA=T;DP=145     GT:GQ:DP        0/1:100:33      0/1:100:33      0/1:100:79
+1      84466071        rs589918        A       G       .       PASS    AA=A;DP=137     GT:GQ:DP        0/1:100:33      0/1:100:38      0/1:100:66
+11     45243538        rs11604409      C       G       .       PASS    AA=C;DP=111     GT:GQ:DP        0/1:100:33      0/1:33:17       0/1:100:60
+8      11462514        rs13280813      G       T       .       PASS    AA=G;DP=122     GT:GQ:DP        0/1:100:33      0/1:35:9        0/1:100:67
+10     3795712 rs10795072      A       G       .       PASS    AA=G;DP=143     GT:GQ:DP        0/1:100:33      0/1:36:18       0/1:100:43
+13     47297962        rs4609732       C       T       .       PASS    AA=C;DP=131     GT:GQ:DP        0/1:100:33      0/1:37:21       0/1:100:79
+10     30227739        rs2989421       C       T       .       PASS    AA=C;DP=148     GT:GQ:DP        0/1:100:33      0/1:37:25       0/1:100:81
+7      98353405        .       G       T       .       PASS    AA=G;DP=123     GT:GQ:DP        0/1:100:33      0/1:38:20       0/1:100:69
+2      195302677       rs12693740      C       T       .       PASS    AA=C;DP=95      GT:GQ:DP        0/1:100:33      0/1:42:11       0/1:100:39
+15     55245635        rs59799036      G       T       .       PASS    AA=G;DP=127     GT:GQ:DP        0/1:100:33      0/1:42:18       0/1:100:78
+1      5712917 .       C       G       .       PASS    AA=G;DP=138     GT:GQ:DP        0/1:100:33      0/1:43:13       0/1:100:45
+16     6753288 rs8046305       C       T       .       PASS    AA=C;DP=143     GT:GQ:DP        0/1:100:33      0/1:46:23       0/1:100:40
+15     43233448        rs2458236       C       T       .       PASS    AA=T;DP=133     GT:GQ:DP        0/1:100:33      0/1:48:18       0/1:100:46
+22     19287343        rs60128632      C       T       .       PASS    AA=t;DP=113     GT:GQ:DP        0/1:100:33      0/1:49:14       0/1:100:68
+8      139711509       rs4301456       A       C       .       PASS    AA=A;DP=124     GT:GQ:DP        0/1:100:33      0/1:49:23       0/1:100:67
+17     8947763 rs4791784       A       G       .       PASS    AA=A;DP=155     GT:GQ:DP        0/1:100:33      0/1:49:26       0/1:100:54
+8      140070695       rs6982999       C       G       .       PASS    AA=C;DP=121     GT:GQ:DP        0/1:100:33      0/1:54:20       0/1:100:69
+10     100812046       rs1970535       A       C       .       PASS    AA=A;DP=102     GT:GQ:DP        0/1:100:33      0/1:56:13       0/1:100:55
+2      109289550       rs6542812       C       T       .       PASS    AA=T;DP=104     GT:GQ:DP        0/1:100:33      0/1:62:14       0/1:100:54
+9      91769529        rs10993454      A       G       .       PASS    AA=N;DP=122     GT:GQ:DP        0/1:100:33      0/1:62:14       0/1:100:78
+13     102379615       rs701543        C       T       .       PASS    AA=T;DP=123     GT:GQ:DP        0/1:100:33      0/1:69:20       0/1:100:70
+21     25950828        rs963103        C       T       .       PASS    AA=T;DP=116     GT:GQ:DP        0/1:100:33      0/1:69:22       0/1:100:62
+10     80260617        rs1347960       C       T       .       PASS    AA=C;DP=130     GT:GQ:DP        0/1:100:33      0/1:70:21       0/1:100:77
+3      103141616       rs2925323       C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        0/1:100:33      0/1:72:20       0/1:100:62
+1      61100412        rs7546977       C       T       .       PASS    AA=C;DP=132;HM2;HM3     GT:GQ:DP        0/1:100:33      0/1:77:26       0/1:100:73
+8      66977541        rs9694490       A       G       .       PASS    AA=G;DP=138     GT:GQ:DP        0/1:100:33      0/1:78:23       0/1:100:86
+16     75839499        rs13337994      A       G       .       PASS    AA=G;DP=119     GT:GQ:DP        0/1:100:33      0/1:79:20       0/1:100:66
+1      186188373       rs7534766       C       T       .       PASS    AA=T;DP=138;HM2 GT:GQ:DP        0/1:100:33      0/1:80:24       0/1:100:78
+16     82095671        rs4782805       C       T       .       PASS    AA=T;DP=134     GT:GQ:DP        0/1:100:33      0/1:82:17       0/1:100:83
+1      17316137        rs6675839       G       T       .       PASS    AA=G;DP=125     GT:GQ:DP        0/1:100:33      0/1:84:25       0/1:100:66
+2      151453250       rs57844203      A       G       .       PASS    AA=a;DP=159     GT:GQ:DP        0/1:100:33      0/1:84:32       0/1:100:53
+20     57621749        rs6128644       C       T       .       PASS    AA=c;DP=125     GT:GQ:DP        0/1:100:33      0/1:85:18       0/1:100:76
+11     122568292       rs11219059      C       G       .       PASS    AA=C;DP=136     GT:GQ:DP        0/1:100:33      0/1:86:21       0/1:100:84
+5      113050968       rs10519361      C       T       .       PASS    AA=T;DP=143     GT:GQ:DP        0/1:100:33      0/1:87:27       0/1:100:84
+1      46320455        rs1768802       A       G       .       PASS    AA=G;DP=105;HM3 GT:GQ:DP        0/1:100:33      0/1:88:19       0/1:100:54
+4      23580702        rs2324234       G       T       .       PASS    AA=T;DP=142     GT:GQ:DP        0/1:100:33      0/1:88:24       0/1:100:44
+12     5116420 rs12824083      A       G       .       PASS    AA=A;DP=134     GT:GQ:DP        0/1:100:33      0/1:88:24       0/1:100:77
+8      59276366        rs11994480      C       T       .       PASS    AA=C;DP=118     GT:GQ:DP        0/1:100:33      0/1:90:30       0/1:100:56
+1      150405933       rs6700989       A       G       .       PASS    AA=a;DP=144     GT:GQ:DP        0/1:100:33      0/1:90:31       0/1:100:80
+3      121563543       rs3914498       C       T       .       PASS    AA=C;DP=133     GT:GQ:DP        0/1:100:33      0/1:91:21       0/1:100:79
+14     73717171        rs2358633       A       G       .       PASS    AA=G;DP=106     GT:GQ:DP        0/1:100:33      0/1:93:19       0/1:100:54
+7      40700281        rs6462987       C       T       .       PASS    AA=C;DP=111     GT:GQ:DP        0/1:100:33      0/1:93:23       0/1:100:55
+20     41530574        rs6030891       A       G       .       PASS    AA=A;DP=101     GT:GQ:DP        0/1:100:33      0/1:94:15       0/1:100:53
+6      83598205        rs176596        A       G       .       PASS    AA=A;DP=145     GT:GQ:DP        0/1:100:33      0/1:98:24       0/1:100:88
+8      83830388        rs13254663      G       T       .       PASS    AA=G;DP=142     GT:GQ:DP        0/1:100:33      0/1:98:28       0/1:100:80
+8      135044719       .       C       T       .       PASS    AA=C;DP=103     GT:GQ:DP        0/1:100:34      0/1:100:16      0/1:100:53
+5      82914926        rs61211969      G       T       .       PASS    AA=T;DP=121     GT:GQ:DP        0/1:100:34      0/1:100:19      0/1:100:72
+5      15278715        rs6554871       A       G       .       PASS    AA=a;DP=118     GT:GQ:DP        0/1:100:34      0/1:100:20      0/1:100:67
+7      135623516       rs930008        A       G       .       PASS    AA=A;DP=118     GT:GQ:DP        0/1:100:34      0/1:100:23      0/1:100:60
+18     12308027        rs4796960       C       G       .       PASS    AA=C;DP=144     GT:GQ:DP        0/1:100:34      0/1:100:23      0/1:100:87
+12     71363360        rs10879476      A       G       .       PASS    AA=A;DP=115     GT:GQ:DP        0/1:100:34      0/1:100:24      0/1:100:59
+2      118822334       rs6711687       C       T       .       PASS    AA=C;DP=118     GT:GQ:DP        0/1:100:34      0/1:100:24      0/1:100:62
+4      79675139        rs12648204      C       G       .       PASS    AA=G;DP=125     GT:GQ:DP        0/1:100:34      0/1:100:24      0/1:100:69
+1      101904515       rs4908173       A       G       .       PASS    AA=G;DP=117;HM2 GT:GQ:DP        0/1:100:34      0/1:100:25      0/1:100:58
+12     105417993       rs7137638       G       T       .       PASS    AA=T;DP=135     GT:GQ:DP        0/1:100:34      0/1:100:25      0/1:100:76
+1      244601437       rs6664600       C       G       .       PASS    AA=C;DP=95      GT:GQ:DP        0/1:100:34      0/1:100:26      0/1:100:25
+18     22855413        rs7237212       C       T       .       PASS    AA=C;DP=148     GT:GQ:DP        0/1:100:34      0/1:100:26      0/1:100:88
+1      242239535       rs563745        C       G       .       PASS    AA=G;DP=122;HM2 GT:GQ:DP        0/1:100:34      0/1:100:27      0/1:100:63
+8      275515  rs61646313      C       G       .       PASS    AA=G;DP=136     GT:GQ:DP        0/1:100:34      0/1:100:27      0/1:100:72
+10     127952690       rs4412676       C       T       .       PASS    AA=T;DP=139     GT:GQ:DP        0/1:100:34      0/1:100:27      0/1:100:76
+4      103409301       .       A       G       .       PASS    AA=A;DP=126     GT:GQ:DP        0/1:100:34      0/1:100:29      0/1:100:64
+12     54215465        rs59920067      C       G       .       PASS    AA=-;DP=152     GT:GQ:DP        0/1:100:34      0/1:100:29      0/1:100:90
+2      141624325       rs11892722      A       G       .       PASS    AA=A;DP=121     GT:GQ:DP        0/1:100:34      0/1:100:30      0/1:100:56
+1      48459453        rs212985        C       T       .       PASS    AA=C;DP=166     GT:GQ:DP        0/1:100:34      0/1:100:31      0/1:100:102
+1      53980634        rs797898        C       T       .       PASS    AA=T;DP=124     GT:GQ:DP        0/1:100:34      0/1:100:31      0/1:100:60
+2      40519299        rs11685475      C       G       .       PASS    AA=G;DP=128     GT:GQ:DP        0/1:100:34      0/1:100:31      0/1:100:64
+2      134277481       rs6759873       C       G       .       PASS    AA=C;DP=162     GT:GQ:DP        0/1:100:34      0/1:100:33      0/1:100:88
+4      110372361       rs6817850       A       G       .       PASS    AA=G;DP=168     GT:GQ:DP        0/1:100:34      0/1:100:34      0/1:100:53
+13     78738244        rs7322427       A       G       .       PASS    AA=G;DP=151     GT:GQ:DP        0/1:100:34      0/1:100:35      0/1:100:84
+8      36282676        .       C       T       .       PASS    AA=c;DP=147     GT:GQ:DP        0/1:100:34      0/1:100:36      0/1:100:80
+6      114814941       .       C       G       .       PASS    AA=G;DP=151     GT:GQ:DP        0/1:100:34      0/1:100:37      0/1:100:82
+8      11437439        rs17153437      A       G       .       PASS    AA=A;DP=142     GT:GQ:DP        0/1:100:34      0/1:13:27       0/1:100:81
+5      1378803 rs465498        A       G       .       PASS    AA=G;DP=127     GT:GQ:DP        0/1:100:34      0/1:15:23       0/1:100:66
+7      151172426       rs6953067       C       G       .       PASS    AA=G;DP=114     GT:GQ:DP        0/1:100:34      0/1:35:13       0/1:100:68
+1      183095000       rs234668        A       G       .       PASS    AA=G;DP=117;HM2;HM3     GT:GQ:DP        0/1:100:34      0/1:36:20       0/1:100:64
+21     38830033        rs7280823       A       G       .       PASS    AA=G;DP=129     GT:GQ:DP        0/1:100:34      0/1:45:24       0/1:100:70
+9      97480928        rs10816348      A       C       .       PASS    AA=A;DP=115     GT:GQ:DP        0/1:100:34      0/1:49:13       0/1:100:69
+2      45303116        rs6743472       A       G       .       PASS    AA=A;DP=125     GT:GQ:DP        0/1:100:34      0/1:54:18       0/1:100:72
+12     19750154        rs4307783       A       G       .       PASS    AA=a;DP=108     GT:GQ:DP        0/1:100:34      0/1:63:18       0/1:100:58
+3      58023722        rs6445941       C       T       .       PASS    AA=C;DP=137     GT:GQ:DP        0/1:100:34      0/1:63:23       0/1:100:82
+1      49324623        rs6588238       C       T       .       PASS    AA=T;DP=108;HM2;HM3     GT:GQ:DP        0/1:100:34      0/1:65:20       0/1:100:44
+16     79593825        rs2602411       A       G       .       PASS    AA=G;DP=146     GT:GQ:DP        0/1:100:34      0/1:65:28       0/1:100:39
+14     81171590        rs4904010       A       T       .       PASS    AA=T;DP=102     GT:GQ:DP        0/1:100:34      0/1:67:13       0/1:100:31
+7      112749019       rs1722325       A       G       .       PASS    AA=A;DP=116     GT:GQ:DP        0/1:100:34      0/1:6:19        0/1:100:63
+4      178873520       rs6819678       C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        0/1:100:34      0/1:70:19       0/1:100:52
+6      37349762        rs6917722       A       G       .       PASS    AA=A;DP=145     GT:GQ:DP        0/1:100:34      0/1:74:30       0/1:100:71
+5      176038224       .       G       T       .       PASS    AA=G;DP=144     GT:GQ:DP        0/1:100:34      0/1:76:14       0/1:100:93
+8      13033439        rs13255113      A       G       .       PASS    AA=G;DP=133     GT:GQ:DP        0/1:100:34      0/1:76:22       0/1:100:77
+8      32460587        rs17717485      A       G       .       PASS    AA=A;DP=155     GT:GQ:DP        0/1:100:34      0/1:77:25       0/1:100:98
+2      153089749       rs7595822       A       G       .       PASS    AA=A;DP=133     GT:GQ:DP        0/1:100:34      0/1:78:17       0/1:100:81
+11     100878007       rs7934219       C       T       .       PASS    AA=T;DP=121     GT:GQ:DP        0/1:100:34      0/1:84:22       0/1:100:63
+3      8922542 rs7613929       C       T       .       PASS    AA=C;DP=117     GT:GQ:DP        0/1:100:34      0/1:87:19       0/1:100:64
+10     72326008        rs827351        A       G       .       PASS    AA=A;DP=133     GT:GQ:DP        0/1:100:34      0/1:87:28       0/1:100:71
+6      112474618       .       C       T       .       PASS    AA=C;DP=149     GT:GQ:DP        0/1:100:34      0/1:90:29       0/1:100:37
+18     74307634        rs7230742       G       T       .       PASS    AA=A;DP=117     GT:GQ:DP        0/1:100:34      0/1:91:22       0/1:100:62
+5      174743145       rs57719302      G       T       .       PASS    AA=G;DP=142     GT:GQ:DP        0/1:100:34      0/1:94:27       0/1:100:79
+22     35676957        rs5756421       A       G       .       PASS    AA=N;DP=142     GT:GQ:DP        0/1:100:34      0/1:95:23       0/1:100:84
+12     41837767        rs7974795       G       T       .       PASS    AA=G;DP=127     GT:GQ:DP        0/1:100:34      0/1:96:24       0/1:100:68
+12     29921902        rs12226994      C       T       .       PASS    AA=C;DP=130     GT:GQ:DP        0/1:100:34      0/1:99:21       0/1:100:73
+7      22121108        rs11768715      A       G       .       PASS    AA=A;DP=112     GT:GQ:DP        0/1:100:35      0/1:100:20      0/1:100:55
+5      136951760       rs8180475       C       T       .       PASS    AA=C;DP=122     GT:GQ:DP        0/1:100:35      0/1:100:21      0/1:100:65
+17     10223954        rs8079011       A       G       .       PASS    AA=A;DP=136     GT:GQ:DP        0/1:100:35      0/1:100:22      0/1:100:80
+17     27093316        rs8074803       A       G       .       PASS    AA=G;DP=155     GT:GQ:DP        0/1:100:35      0/1:100:23      0/1:100:48
+6      70630857        rs1538965       A       C       .       PASS    AA=C;DP=114     GT:GQ:DP        0/1:100:35      0/1:100:23      0/1:100:55
+6      96507495        rs34173051      A       G       .       PASS    AA=A;DP=111     GT:GQ:DP        0/1:100:35      0/1:100:24      0/1:100:52
+18     49045672        rs1431199       C       G       .       PASS    AA=G;DP=124     GT:GQ:DP        0/1:100:35      0/1:100:24      0/1:100:64
+2      2728527 rs2053906       A       G       .       PASS    AA=G;DP=136     GT:GQ:DP        0/1:100:35      0/1:100:24      0/1:100:75
+4      127723938       rs35935071      A       G       .       PASS    AA=A;DP=138     GT:GQ:DP        0/1:100:35      0/1:100:24      0/1:100:76
+7      47882442        rs4724657       A       G       .       PASS    AA=G;DP=167     GT:GQ:DP        0/1:100:35      0/1:100:26      0/1:100:109
+10     44012849        rs10160170      A       G       .       PASS    AA=A;DP=144     GT:GQ:DP        0/1:100:35      0/1:100:27      0/1:100:82
+18     33413170        rs1557343       A       T       .       PASS    AA=A;DP=157     GT:GQ:DP        0/1:100:35      0/1:100:28      0/1:100:86
+1      174027812       rs59691682      C       T       .       PASS    AA=c;DP=154     GT:GQ:DP        0/1:100:35      0/1:100:28      0/1:100:95
+9      3694271 rs1334067       A       G       .       PASS    AA=G;DP=149     GT:GQ:DP        0/1:100:35      0/1:100:29      0/1:100:86
+12     6160802 rs4290286       A       G       .       PASS    AA=-;DP=161     GT:GQ:DP        0/1:100:35      0/1:100:32      0/1:100:46
+20     2707013 rs215520        C       T       .       PASS    AA=C;DP=146     GT:GQ:DP        0/1:100:35      0/1:17:26       0/1:100:86
+1      16022911        rs56878041      C       T       .       PASS    AA=c;DP=114     GT:GQ:DP        0/1:100:35      0/1:25:18       0/1:100:61
+4      12495052        rs4834902       C       T       .       PASS    AA=C;DP=121     GT:GQ:DP        0/1:100:35      0/1:28:18       0/1:100:65
+12     125307026       .       C       G       .       PASS    AA=C;DP=127     GT:GQ:DP        0/1:100:35      0/1:33:19       0/1:100:72
+1      113254282       rs7539797       C       T       .       PASS    AA=C;DP=124     GT:GQ:DP        0/1:100:35      0/1:42:18       0/1:100:72
+21     37341652        rs12482635      C       T       .       PASS    AA=C;DP=107     GT:GQ:DP        0/1:100:35      0/1:44:10       0/1:100:50
+3      46697696        rs13080080      G       T       .       PASS    AA=T;DP=98      GT:GQ:DP        0/1:100:35      0/1:45:12       0/1:100:40
+19     4053137 rs8100110       A       G       .       PASS    AA=A;DP=131     GT:GQ:DP        0/1:100:35      0/1:50:16       0/1:100:79
+18     41511062        rs3861805       C       T       .       PASS    AA=T;DP=126     GT:GQ:DP        0/1:100:35      0/1:57:18       0/1:100:76
+12     41688182        rs7957277       A       T       .       PASS    AA=-;DP=94      GT:GQ:DP        0/1:100:35      0/1:62:18       0/1:100:34
+7      66865302        rs10250491      A       G       .       PASS    AA=G;DP=120     GT:GQ:DP        0/1:100:35      0/1:62:26       0/1:100:62
+1      8945953 .       C       T       .       PASS    AA=C;DP=142     GT:GQ:DP        0/1:100:35      0/1:63:19       0/1:100:52
+20     52391649        rs793049        C       G       .       PASS    AA=G;DP=129     GT:GQ:DP        0/1:100:35      0/1:63:27       0/1:100:68
+2      37849231        rs12615742      C       T       .       PASS    AA=C;DP=152     GT:GQ:DP        0/1:100:35      0/1:63:37       0/1:100:73
+18     6189331 .       C       T       .       PASS    AA=T;DP=131     GT:GQ:DP        0/1:100:35      0/1:66:27       0/1:100:71
+3      99353112        .       C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        0/1:100:35      0/1:69:20       0/1:100:61
+4      169854703       rs4425335       A       G       .       PASS    AA=G;DP=133     GT:GQ:DP        0/1:100:35      0/1:69:27       0/1:100:73
+4      185180607       rs11937038      A       G       .       PASS    AA=A;DP=161     GT:GQ:DP        0/1:100:35      0/1:72:26       0/1:100:54
+4      139856984       rs6851505       G       T       .       PASS    AA=G;DP=131     GT:GQ:DP        0/1:100:35      0/1:74:25       0/1:100:70
+5      80429705        rs455461        G       T       .       PASS    AA=T;DP=144     GT:GQ:DP        0/1:100:35      0/1:78:25       0/1:100:87
+4      154130477       rs6821628       C       T       .       PASS    AA=C;DP=122     GT:GQ:DP        0/1:100:35      0/1:84:15       0/1:100:72
+13     42835375        rs9533462       C       T       .       PASS    AA=C;DP=119     GT:GQ:DP        0/1:100:35      0/1:85:21       0/1:100:62
+3      46588547        .       A       G       .       PASS    AA=A;DP=99      GT:GQ:DP        0/1:100:35      0/1:90:16       0/1:100:48
+5      148559497       rs4290999       A       G       .       PASS    AA=G;DP=136     GT:GQ:DP        0/1:100:35      0/1:91:25       0/1:100:76
+18     12712888        rs1941074       C       G       .       PASS    AA=G;DP=124     GT:GQ:DP        0/1:100:35      0/1:92:23       0/1:100:65
+6      70536823        rs1902653       C       T       .       PASS    AA=C;DP=145     GT:GQ:DP        0/1:100:35      0/1:92:26       0/1:100:87
+7      134200378       rs3800745       A       G       .       PASS    AA=A;DP=149     GT:GQ:DP        0/1:100:35      0/1:94:26       0/1:100:83
+1      47619575        rs3814003       C       G       .       PASS    AA=G;DP=139;HM2 GT:GQ:DP        0/1:100:35      0/1:98:24       0/1:100:80
+3      128517080       .       G       T       .       PASS    AA=T;DP=117     GT:GQ:DP        0/1:100:35      0/1:99:16       0/1:100:66
+5      79812428        rs856772        A       G       .       PASS    AA=G;DP=117     GT:GQ:DP        0/1:100:36      0/1:100:19      0/1:100:63
+7      140639225       rs17133517      A       C       .       PASS    AA=A;DP=111     GT:GQ:DP        0/1:100:36      0/1:100:20      0/1:100:56
+8      3484041 rs4523281       C       T       .       PASS    AA=C;DP=119     GT:GQ:DP        0/1:100:36      0/1:100:20      0/1:100:58
+9      15280342        rs10810371      C       G       .       PASS    AA=C;DP=125     GT:GQ:DP        0/1:100:36      0/1:100:20      0/1:100:70
+2      1194612 rs4971414       A       G       .       PASS    AA=A;DP=134     GT:GQ:DP        0/1:100:36      0/1:100:22      0/1:100:75
+1      201144020       rs9919219       C       T       .       PASS    AA=T;DP=133;HM2;HM3     GT:GQ:DP        0/1:100:36      0/1:100:22      0/1:100:78
+6      129679608       rs1490392       C       T       .       PASS    AA=T;DP=147     GT:GQ:DP        0/1:100:36      0/1:100:24      0/1:100:82
+9      118224904       rs1558921       C       T       .       PASS    AA=C;DP=133     GT:GQ:DP        0/1:100:36      0/1:100:28      0/1:100:70
+10     114138679       rs12255316      C       T       .       PASS    AA=C;DP=145     GT:GQ:DP        0/1:100:36      0/1:100:28      0/1:100:83
+16     25810187        rs4592663       C       T       .       PASS    AA=C;DP=129     GT:GQ:DP        0/1:100:36      0/1:100:30      0/1:100:63
+3      100210983       rs2470833       C       G       .       PASS    AA=C;DP=133     GT:GQ:DP        0/1:100:36      0/1:100:30      0/1:100:68
+10     112157318       rs4918512       A       G       .       PASS    AA=G;DP=152     GT:GQ:DP        0/1:100:36      0/1:100:31      0/1:100:45
+13     78951170        rs11840407      C       T       .       PASS    AA=T;DP=144     GT:GQ:DP        0/1:100:36      0/1:100:32      0/1:100:76
+1      190667774       rs6664948       C       G       .       PASS    AA=C;DP=132     GT:GQ:DP        0/1:100:36      0/1:100:33      0/1:100:66
+11     12926190        .       C       T       .       PASS    AA=C;DP=164     GT:GQ:DP        0/1:100:36      0/1:100:43      0/1:100:86
+9      17570616        rs8181077       A       T       .       PASS    AA=A;DP=144     GT:GQ:DP        0/1:100:36      0/1:32:22       0/1:100:91
+4      76783630        rs7676322       C       T       .       PASS    AA=T;DP=88      GT:GQ:DP        0/1:100:36      0/1:39:15       0/1:100:25
+14     87577583        rs28424269      C       G       .       PASS    AA=c;DP=158     GT:GQ:DP        0/1:100:36      0/1:40:32       0/1:100:52
+8      96809021        rs4495398       C       T       .       PASS    AA=C;DP=116     GT:GQ:DP        0/1:100:36      0/1:45:18       0/1:100:59
+6      107478378       rs2593801       C       T       .       PASS    AA=c;DP=109     GT:GQ:DP        0/1:100:36      0/1:46:23       0/1:100:51
+11     62820064        rs474874        A       G       .       PASS    AA=a;DP=109     GT:GQ:DP        0/1:100:36      0/1:49:18       0/1:100:55
+3      135094768       rs10935088      A       G       .       PASS    AA=A;DP=130     GT:GQ:DP        0/1:100:36      0/1:49:18       0/1:100:79
+3      162613965       rs35713426      A       G       .       PASS    AA=G;DP=118     GT:GQ:DP        0/1:100:36      0/1:51:22       0/1:100:62
+1      73303748        rs9919151       C       G       .       PASS    AA=C;DP=119;HM2 GT:GQ:DP        0/1:100:36      0/1:51:24       0/1:100:57
+22     43582197        rs5766046       C       T       .       PASS    AA=C;DP=147     GT:GQ:DP        0/1:100:36      0/1:53:20       0/1:100:49
+2      239303420       rs6720396       C       T       .       PASS    AA=C;DP=136     GT:GQ:DP        0/1:100:36      0/1:54:13       0/1:100:87
+12     103960082       rs4964319       A       G       .       PASS    AA=a;DP=125     GT:GQ:DP        0/1:100:36      0/1:58:10       0/1:100:79
+8      142484832       rs34642025      A       G       .       PASS    AA=G;DP=154     GT:GQ:DP        0/1:100:36      0/1:58:13       0/1:100:101
+4      8662097 rs7692629       C       T       .       PASS    AA=C;DP=153     GT:GQ:DP        0/1:100:36      0/1:58:27       0/1:100:88
+2      218115626       .       C       T       .       PASS    AA=C;DP=107     GT:GQ:DP        0/1:100:36      0/1:60:8        0/1:100:63
+2      220502887       rs36063538      A       T       .       PASS    AA=T;DP=121     GT:GQ:DP        0/1:100:36      0/1:62:23       0/1:100:39
+10     28205721        rs7077304       A       G       .       PASS    AA=G;DP=157     GT:GQ:DP        0/1:100:36      0/1:62:30       0/1:100:90
+2      31125285        .       A       G       .       PASS    AA=A;DP=104     GT:GQ:DP        0/1:100:36      0/1:63:15       0/1:100:44
+5      114869185       rs2546483       C       T       .       PASS    AA=T;DP=133     GT:GQ:DP        0/1:100:36      0/1:63:20       0/1:100:75
+4      82843753        rs11933634      C       T       .       PASS    AA=C;DP=138     GT:GQ:DP        0/1:100:36      0/1:66:24       0/1:100:79
+6      11309513        rs3798736       A       G       .       PASS    AA=A;DP=118     GT:GQ:DP        0/1:100:36      0/1:68:22       0/1:100:60
+9      29571901        rs6415761       C       T       .       PASS    AA=T;DP=139     GT:GQ:DP        0/1:100:36      0/1:73:15       0/1:100:89
+12     123337488       .       C       T       .       PASS    AA=C;DP=103     GT:GQ:DP        0/1:100:36      0/1:77:15       0/1:100:51
+9      31448434        rs10970358      A       C       .       PASS    AA=A;DP=110     GT:GQ:DP        0/1:100:36      0/1:78:20       0/1:100:54
+2      158042035       rs6756844       A       G       .       PASS    AA=A;DP=153     GT:GQ:DP        0/1:100:36      0/1:84:32       0/1:100:46
+3      195473347       rs11919378      C       G       .       PASS    AA=C;DP=164     GT:GQ:DP        0/1:100:36      0/1:87:19       0/1:100:65
+3      129730529       rs4857854       C       T       .       PASS    AA=T;DP=136     GT:GQ:DP        0/1:100:36      0/1:92:26       0/1:100:73
+18     19785157        rs17187332      C       T       .       PASS    AA=C;DP=121     GT:GQ:DP        0/1:100:36      0/1:93:20       0/1:100:66
+1      27776239        .       C       T       .       PASS    AA=T;DP=135     GT:GQ:DP        0/1:100:36      0/1:93:21       0/1:100:76
+2      128402503       rs2164655       C       T       .       PASS    AA=c;DP=133     GT:GQ:DP        0/1:100:36      0/1:93:24       0/1:100:74
+5      21753617        .       A       G       .       PASS    AA=a;DP=147     GT:GQ:DP        0/1:100:36      0/1:95:30       0/1:100:75
+21     43675693        rs128543        A       G       .       PASS    AA=G;DP=128     GT:GQ:DP        0/1:100:36      0/1:96:22       0/1:100:72
+14     94718431        rs56817762      C       G       .       PASS    AA=C;DP=127     GT:GQ:DP        0/1:100:36      0/1:97:31       0/1:100:60
+9      85450407        rs1537503       C       T       .       PASS    AA=C;DP=119     GT:GQ:DP        0/1:100:37      0/1:100:23      0/1:100:54
+5      60802650        rs13172080      A       G       .       PASS    AA=A;DP=125     GT:GQ:DP        0/1:100:37      0/1:100:23      0/1:100:63
+4      129661248       rs6534689       A       G       .       PASS    AA=G;DP=132     GT:GQ:DP        0/1:100:37      0/1:100:23      0/1:100:72
+18     54641026        rs28634172      C       T       .       PASS    AA=T;DP=142     GT:GQ:DP        0/1:100:37      0/1:100:23      0/1:100:80
+4      163579912       rs10013245      C       T       .       PASS    AA=t;DP=118     GT:GQ:DP        0/1:100:37      0/1:100:25      0/1:100:60
+9      119209373       rs10739493      C       T       .       PASS    AA=T;DP=154     GT:GQ:DP        0/1:100:37      0/1:100:27      0/1:100:89
+11     36720864        rs964527        A       G       .       PASS    AA=G;DP=137     GT:GQ:DP        0/1:100:37      0/1:100:28      0/1:100:72
+9      939942  rs12004781      C       G       .       PASS    AA=C;DP=140     GT:GQ:DP        0/1:100:37      0/1:100:28      0/1:100:75
+3      16834714        rs6779302       G       T       .       PASS    AA=T;DP=142     GT:GQ:DP        0/1:100:37      0/1:100:28      0/1:100:81
+1      216858134       rs28694430      A       C       .       PASS    AA=C;DP=138     GT:GQ:DP        0/1:100:37      0/1:100:29      0/1:100:71
+7      119871214       rs7800592       A       G       .       PASS    AA=a;DP=148     GT:GQ:DP        0/1:100:37      0/1:100:31      0/1:100:83
+7      130319756       .       C       G       .       PASS    AA=c;DP=151     GT:GQ:DP        0/1:100:37      0/1:100:31      0/1:100:88
+14     76221088        rs2041825       A       G       .       PASS    AA=A;DP=124     GT:GQ:DP        0/1:100:37      0/1:100:33      0/1:100:56
+7      16972366        rs7787613       C       T       .       PASS    AA=C;DP=153     GT:GQ:DP        0/1:100:37      0/1:100:33      0/1:100:81
+10     65252298        rs10995646      A       G       .       PASS    AA=A;DP=145     GT:GQ:DP        0/1:100:37      0/1:100:34      0/1:100:78
+10     71570195        rs4746969       G       T       .       PASS    AA=T;DP=165     GT:GQ:DP        0/1:100:37      0/1:100:36      0/1:100:92
+14     74567737        rs735452        C       T       .       PASS    AA=C;DP=145     GT:GQ:DP        0/1:100:37      0/1:100:41      0/1:100:68
+14     75861836        rs8003968       A       C       .       PASS    AA=C;DP=166     GT:GQ:DP        0/1:100:37      0/1:15:29       0/1:100:99
+16     87498700        .       C       G       .       PASS    AA=C;DP=124     GT:GQ:DP        0/1:100:37      0/1:34:12       0/1:100:75
+3      196447689       .       C       T       .       PASS    AA=T;DP=122     GT:GQ:DP        0/1:100:37      0/1:36:13       0/1:100:71
+7      13460225        rs10155975      C       T       .       PASS    AA=T;DP=137     GT:GQ:DP        0/1:100:37      0/1:41:23       0/1:100:82
+9      17287694        rs17828423      C       T       .       PASS    AA=C;DP=128     GT:GQ:DP        0/1:100:37      0/1:43:21       0/1:100:70
+11     34389117        .       C       T       .       PASS    AA=C;DP=116     GT:GQ:DP        0/1:100:37      0/1:49:14       0/1:100:64
+10     134774650       rs59142670      A       T       .       PASS    AA=T;DP=81      GT:GQ:DP        0/1:100:37      0/1:4:9 0/1:100:27
+8      36265391        rs6998508       C       T       .       PASS    AA=T;DP=137     GT:GQ:DP        0/1:100:37      0/1:53:28       0/1:100:76
+14     101325581       rs61994021      C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        0/1:100:37      0/1:55:14       0/1:100:69
+8      134666919       rs7007549       G       T       .       PASS    AA=G;DP=148     GT:GQ:DP        0/1:100:37      0/1:58:19       0/1:100:94
+1      208655124       rs4845016       C       T       .       PASS    AA=T;DP=148;HM2;HM3     GT:GQ:DP        0/1:100:37      0/1:61:27       0/1:100:84
+2      8718936 .       A       G       .       PASS    AA=A;DP=139     GT:GQ:DP        0/1:100:37      0/1:68:21       0/1:100:82
+3      4206751 rs1385485       C       T       .       PASS    AA=T;DP=128     GT:GQ:DP        0/1:100:37      0/1:73:22       0/1:100:68
+11     101115590       rs4384360       C       T       .       PASS    AA=c;DP=138     GT:GQ:DP        0/1:100:37      0/1:75:21       0/1:100:81
+10     49061124        rs2059957       A       G       .       PASS    AA=G;DP=135     GT:GQ:DP        0/1:100:37      0/1:76:22       0/1:100:78
+20     44641934        rs202386        C       T       .       PASS    AA=T;DP=125     GT:GQ:DP        0/1:100:37      0/1:81:29       0/1:100:58
+1      8794552 rs7546225       C       T       .       PASS    AA=C;DP=124;HM2;HM3     GT:GQ:DP        0/1:100:37      0/1:82:22       0/1:100:65
+1      159584555       rs35130144      A       G       .       PASS    AA=a;DP=111     GT:GQ:DP        0/1:100:37      0/1:83:17       0/1:100:44
+13     41587009        rs9533002       C       T       .       PASS    AA=C;DP=118     GT:GQ:DP        0/1:100:37      0/1:85:19       0/1:100:63
+18     70253050        rs756010        C       T       .       PASS    AA=T;DP=146     GT:GQ:DP        0/1:100:37      0/1:87:24       0/1:100:44
+14     52932736        rs7154454       A       T       .       PASS    AA=A;DP=117     GT:GQ:DP        0/1:100:37      0/1:89:19       0/1:100:61
+13     87975718        rs9521104       G       T       .       PASS    AA=g;DP=123     GT:GQ:DP        0/1:100:37      0/1:90:22       0/1:100:60
+13     77449143        rs35151769      A       T       .       PASS    AA=T;DP=139     GT:GQ:DP        0/1:100:37      0/1:90:22       0/1:100:82
+12     110138746       rs10083213      C       T       .       PASS    AA=C;DP=140     GT:GQ:DP        0/1:100:37      0/1:92:29       0/1:100:77
+3      123581388       rs16833066      A       G       .       PASS    AA=a;DP=128     GT:GQ:DP        0/1:100:37      0/1:94:22       0/1:100:68
+2      190606463       rs1011584       A       G       .       PASS    AA=G;DP=119     GT:GQ:DP        0/1:100:37      0/1:94:24       0/1:100:58
+16     26200905        rs28386811      G       T       .       PASS    AA=T;DP=132     GT:GQ:DP        0/1:100:37      0/1:94:26       0/1:100:68
+5      21584652        .       C       T       .       PASS    AA=c;DP=143     GT:GQ:DP        0/1:100:37      0/1:98:26       0/1:100:81
+2      75255573        rs12477554      A       G       .       PASS    AA=A;DP=139     GT:GQ:DP        0/1:100:37      0/1:99:17       0/1:100:43
+13     97676809        rs8002043       A       G       .       PASS    AA=A;DP=122     GT:GQ:DP        0/1:100:38      0/1:100:21      0/1:100:61
+9      134872910       rs2773813       C       T       .       PASS    AA=c;DP=160     GT:GQ:DP        0/1:100:38      0/1:100:27      0/1:100:98
+10     98856285        rs7895198       A       G       .       PASS    AA=G;DP=170     GT:GQ:DP        0/1:100:38      0/1:100:37      0/1:100:54
+16     82838846        rs62048573      C       G       .       PASS    AA=C;DP=122     GT:GQ:DP        0/1:100:38      0/1:12:20       0/1:100:63
+6      86667436        rs4707239       G       T       .       PASS    AA=t;DP=120     GT:GQ:DP        0/1:100:38      0/1:36:18       0/1:100:64
+2      241315894       .       C       T       .       PASS    AA=C;DP=149     GT:GQ:DP        0/1:100:38      0/1:38:12       0/1:100:60
+5      71047008        rs3967801       G       T       .       PASS    AA=G;DP=111     GT:GQ:DP        0/1:100:38      0/1:41:18       0/1:100:43
+1      191761813       rs59223353      C       T       .       PASS    AA=C;DP=138     GT:GQ:DP        0/1:100:38      0/1:44:26       0/1:100:73
+9      76351451        rs7025191       C       T       .       PASS    AA=T;DP=140     GT:GQ:DP        0/1:100:38      0/1:56:29       0/1:100:73
+6      16458371        rs59919885      G       T       .       PASS    AA=T;DP=133     GT:GQ:DP        0/1:100:38      0/1:57:22       0/1:100:73
+1      52163620        rs1954260       C       T       .       PASS    AA=c;DP=175;HM2 GT:GQ:DP        0/1:100:38      0/1:58:28       0/1:100:54
+17     1833902 rs4450433       A       G       .       PASS    AA=A;DP=123     GT:GQ:DP        0/1:100:38      0/1:63:14       0/1:100:71
+13     81281038        rs398899        A       C       .       PASS    AA=C;DP=128     GT:GQ:DP        0/1:100:38      0/1:67:23       0/1:100:67
+5      133127078       rs258072        C       T       .       PASS    AA=C;DP=149     GT:GQ:DP        0/1:100:38      0/1:78:22       0/1:100:66
+16     30619773        .       G       T       .       PASS    AA=G;DP=148     GT:GQ:DP        0/1:100:38      0/1:80:23       0/1:100:90
+1      47342272        rs6701611       G       T       .       PASS    AA=t;DP=131     GT:GQ:DP        0/1:100:38      0/1:82:18       0/1:100:76
+5      109065431       rs2269199       G       T       .       PASS    AA=G;DP=140     GT:GQ:DP        0/1:100:38      0/1:91:25       0/1:100:76
+1      231074727       rs2753395       A       G       .       PASS    AA=A;DP=134;HM2;HM3     GT:GQ:DP        0/1:100:38      0/1:93:20       0/1:100:78
+10     118898310       .       C       G       .       PASS    AA=C;DP=114     GT:GQ:DP        0/1:100:39      0/1:100:16      0/1:100:61
+18     1752992 .       A       G       .       PASS    AA=G;DP=123     GT:GQ:DP        0/1:100:39      0/1:100:23      0/1:100:58
+11     129990572       .       A       T       .       PASS    AA=A;DP=118     GT:GQ:DP        0/1:100:39      0/1:100:25      0/1:100:52
+7      8520851 rs1024476       A       T       .       PASS    AA=A;DP=141     GT:GQ:DP        0/1:100:39      0/1:100:26      0/1:100:81
+12     104283968       rs1432588       C       T       .       PASS    AA=C;DP=157     GT:GQ:DP        0/1:100:39      0/1:100:29      0/1:100:54
+3      31034985        rs9838758       C       T       .       PASS    AA=T;DP=156     GT:GQ:DP        0/1:100:39      0/1:100:31      0/1:100:88
+1      153679984       .       C       T       .       PASS    AA=T;DP=138     GT:GQ:DP        0/1:100:39      0/1:100:34      0/1:100:58
+5      6420854 rs57693483      C       T       .       PASS    AA=T;DP=135     GT:GQ:DP        0/1:100:39      0/1:100:34      0/1:100:63
+16     16858882        rs4074171       A       G       .       PASS    AA=A;DP=139     GT:GQ:DP        0/1:100:39      0/1:100:34      0/1:100:69
+6      57518020        rs7742471       A       T       .       PASS    AA=T;DP=168     GT:GQ:DP        0/1:100:39      0/1:100:35      0/1:100:95
+12     109925149       rs61334704      C       G       .       PASS    AA=G;DP=103     GT:GQ:DP        0/1:100:39      0/1:47:14       0/1:100:50
+6      57703610        .       A       G       .       PASS    AA=A;DP=166     GT:GQ:DP        0/1:100:39      0/1:47:26       0/1:100:101
+6      14513715        rs6941243       A       G       .       PASS    AA=A;DP=160     GT:GQ:DP        0/1:100:39      0/1:48:30       0/1:100:88
+5      96734518        rs59471782      C       G       .       PASS    AA=C;DP=108     GT:GQ:DP        0/1:100:39      0/1:52:17       0/1:100:55
+15     72350177        rs240047        A       G       .       PASS    AA=G;DP=111     GT:GQ:DP        0/1:100:39      0/1:53:17       0/1:100:48
+22     43825340        rs5765137       A       G       .       PASS    AA=A;DP=136     GT:GQ:DP        0/1:100:39      0/1:63:18       0/1:100:72
+14     90375274        rs17127064      C       T       .       PASS    AA=C;DP=139     GT:GQ:DP        0/1:100:39      0/1:64:24       0/1:100:76
+3      153110678       rs6806340       C       T       .       PASS    AA=T;DP=128     GT:GQ:DP        0/1:100:39      0/1:79:19       0/1:100:72
+14     32771833        rs17100409      A       G       .       PASS    AA=G;DP=131     GT:GQ:DP        0/1:100:39      0/1:87:30       0/1:100:63
+4      188050918       rs28447565      C       G       .       PASS    AA=C;DP=101     GT:GQ:DP        0/1:100:40      0/1:100:16      0/1:100:46
+12     91672038        rs9669519       A       T       .       PASS    AA=T;DP=127     GT:GQ:DP        0/1:100:40      0/1:100:21      0/1:100:66
+7      134937407       .       A       G       .       PASS    AA=A;DP=135     GT:GQ:DP        0/1:100:40      0/1:100:21      0/1:100:73
+5      142496875       rs246601        C       T       .       PASS    AA=T;DP=131     GT:GQ:DP        0/1:100:40      0/1:100:22      0/1:100:68
+4      90136158        rs10007590      A       G       .       PASS    AA=A;DP=115     GT:GQ:DP        0/1:100:40      0/1:100:25      0/1:100:47
+18     5608950 rs4798379       C       T       .       PASS    AA=C;DP=127     GT:GQ:DP        0/1:100:40      0/1:100:25      0/1:100:60
+1      17258691        rs12404121      C       T       .       PASS    AA=C;DP=164;HM2;HM3     GT:GQ:DP        0/1:100:40      0/1:100:26      0/1:100:99
+4      154393610       rs13107078      A       G       .       PASS    AA=G;DP=158     GT:GQ:DP        0/1:100:40      0/1:100:27      0/1:100:92
+12     61305717        rs907487        C       T       .       PASS    AA=C;DP=167     GT:GQ:DP        0/1:100:40      0/1:100:28      0/1:100:94
+12     130375389       rs4460893       A       G       .       PASS    AA=G;DP=146     GT:GQ:DP        0/1:100:40      0/1:100:29      0/1:100:77
+10     98902265        .       A       G       .       PASS    AA=A;DP=148     GT:GQ:DP        0/1:100:40      0/1:100:30      0/1:100:73
+11     106654307       rs7929893       A       G       .       PASS    AA=A;DP=133     GT:GQ:DP        0/1:100:40      0/1:100:31      0/1:100:61
+11     112404205       rs12288908      C       T       .       PASS    AA=T;DP=147     GT:GQ:DP        0/1:100:40      0/1:100:32      0/1:100:72
+15     31492518        .       A       G       .       PASS    AA=A;DP=142     GT:GQ:DP        0/1:100:40      0/1:100:36      0/1:100:64
+6      159945655       rs56762310      C       T       .       PASS    AA=c;DP=161     GT:GQ:DP        0/1:100:40      0/1:100:37      0/1:100:85
+7      6959765 rs3961242       A       C       .       PASS    AA=a;DP=165     GT:GQ:DP        0/1:100:40      0/1:25:27       0/1:100:86
+1      114797635       rs11102794      A       G       .       PASS    AA=G;DP=165;HM2;HM3     GT:GQ:DP        0/1:100:40      0/1:43:30       0/1:100:54
+6      109716312       rs9374079       A       G       .       PASS    AA=G;DP=110     GT:GQ:DP        0/1:100:40      0/1:76:17       0/1:100:42
+3      129083631       rs4399843       C       T       .       PASS    AA=T;DP=129     GT:GQ:DP        0/1:100:40      0/1:82:30       0/1:100:59
+4      117014079       rs17048146      C       T       .       PASS    AA=C;DP=127     GT:GQ:DP        0/1:100:40      0/1:90:22       0/1:100:65
+16     49689633        rs8055000       A       C       .       PASS    AA=A;DP=130     GT:GQ:DP        0/1:100:40      0/1:93:22       0/1:100:67
+3      141952961       rs12486650      C       T       .       PASS    AA=T;DP=142     GT:GQ:DP        0/1:100:40      0/1:98:21       0/1:100:68
+13     51783839        rs7331858       C       T       .       PASS    AA=T;DP=146     GT:GQ:DP        0/1:100:40      0/1:98:24       0/1:100:41
+2      129257991       rs12473283      C       T       .       PASS    AA=C;DP=137     GT:GQ:DP        0/1:100:41      0/1:100:23      0/1:100:72
+1      46667856        .       C       T       .       PASS    AA=C;DP=153     GT:GQ:DP        0/1:100:41      0/1:100:26      0/1:100:87
+3      72296777        rs4677106       C       G       .       PASS    AA=G;DP=186     GT:GQ:DP        0/1:100:41      0/1:100:27      0/1:100:66
+10     128771166       rs12264769      A       G       .       PASS    AA=G;DP=147     GT:GQ:DP        0/1:100:41      0/1:100:27      0/1:100:80
+14     93843770        rs2180401       G       T       .       PASS    AA=G;DP=146     GT:GQ:DP        0/1:100:41      0/1:100:30      0/1:100:74
+10     125830808       rs3936165       C       T       .       PASS    AA=T;DP=147     GT:GQ:DP        0/1:100:41      0/1:29:25       0/1:100:83
+19     62481059        rs8111136       C       T       .       PASS    AA=T;DP=126     GT:GQ:DP        0/1:100:41      0/1:53:16       0/1:100:73
+17     3943164 rs8080485       C       G       .       PASS    AA=G;DP=115     GT:GQ:DP        0/1:100:41      0/1:89:20       0/1:100:54
+13     62534059        .       A       G       .       PASS    AA=A;DP=175     GT:GQ:DP        0/1:100:41      0/1:90:36       0/1:100:66
+11     10515353        rs7938782       A       G       .       PASS    AA=A;DP=136     GT:GQ:DP        0/1:100:41      0/1:95:27       0/1:100:65
+12     78062535        rs12297890      G       T       .       PASS    AA=T;DP=115     GT:GQ:DP        0/1:100:42      0/1:100:18      0/1:100:44
+3      134493894       rs11922891      C       T       .       PASS    AA=T;DP=145     GT:GQ:DP        0/1:100:42      0/1:100:24      0/1:100:83
+4      62645492        rs4143482       A       G       .       PASS    AA=A;DP=126     GT:GQ:DP        0/1:100:42      0/1:100:31      0/1:100:45
+18     45740894        rs7239281       A       G       .       PASS    AA=G;DP=163     GT:GQ:DP        0/1:100:42      0/1:100:31      0/1:100:93
+12     61457312        rs11174642      A       C       .       PASS    AA=A;DP=145     GT:GQ:DP        0/1:100:42      0/1:100:36      0/1:100:69
+20     44696189        rs3091556       A       G       .       PASS    AA=A;DP=168     GT:GQ:DP        0/1:100:42      0/1:10:24       0/1:100:99
+22     31040094        rs16990181      A       G       .       PASS    AA=A;DP=117     GT:GQ:DP        0/1:100:42      0/1:23:24       0/1:100:51
+12     102132897       rs11111498      C       T       .       PASS    AA=C;DP=128     GT:GQ:DP        0/1:100:42      0/1:65:19       0/1:100:68
+4      9757979 rs6846402       C       T       .       PASS    AA=C;DP=138     GT:GQ:DP        0/1:100:42      0/1:67:29       0/1:100:68
+9      129503521       rs7047602       A       G       .       PASS    AA=A;DP=137     GT:GQ:DP        0/1:100:42      0/1:76:22       0/1:100:73
+16     49194311        rs11642424      A       G       .       PASS    AA=G;DP=174     GT:GQ:DP        0/1:100:42      0/1:77:32       0/1:100:102
+2      148024877       rs10208983      A       G       .       PASS    AA=A;DP=135     GT:GQ:DP        0/1:100:42      0/1:86:16       0/1:100:40
+4      2057000 rs3135157       A       G       .       PASS    AA=a;DP=121     GT:GQ:DP        0/1:100:42      0/1:91:20       0/1:100:58
+10     24060524        rs7903593       C       T       .       PASS    AA=T;DP=123     GT:GQ:DP        0/1:100:43      0/1:100:17      0/1:100:63
+7      37777756        rs28692733      A       G       .       PASS    AA=A;DP=132     GT:GQ:DP        0/1:100:43      0/1:100:22      0/1:100:65
+17     59020818        .       A       G       .       PASS    AA=A;DP=176     GT:GQ:DP        0/1:100:43      0/1:100:33      0/1:100:55
+1      87734172        .       A       C       .       PASS    AA=A;DP=166     GT:GQ:DP        0/1:100:43      0/1:100:33      0/1:100:92
+12     61417921        rs342161        A       G       .       PASS    AA=a;DP=159     GT:GQ:DP        0/1:100:43      0/1:100:34      0/1:100:85
+22     19206509        rs7291930       A       G       .       PASS    AA=G;DP=152     GT:GQ:DP        0/1:100:43      0/1:100:36      0/1:100:74
+3      140136086       .       C       T       .       PASS    AA=C;DP=166     GT:GQ:DP        0/1:100:43      0/1:75:30       0/1:100:92
+1      118942858       rs10923627      A       C       .       PASS    AA=C;DP=127;HM2 GT:GQ:DP        0/1:100:43      0/1:80:21       0/1:100:64
+3      99364236        .       G       T       .       PASS    AA=G;DP=161     GT:GQ:DP        0/1:100:43      0/1:80:25       0/1:100:92
+7      104726960       .       A       T       .       PASS    AA=A;DP=148     GT:GQ:DP        0/1:100:44      0/1:100:19      0/1:100:84
+15     63354851        rs8037323       C       T       .       PASS    AA=C;DP=137     GT:GQ:DP        0/1:100:44      0/1:100:23      0/1:100:68
+5      150382527       rs4958872       C       T       .       PASS    AA=c;DP=159     GT:GQ:DP        0/1:100:44      0/1:100:26      0/1:100:89
+11     112192066       rs630265        A       T       .       PASS    AA=A;DP=150     GT:GQ:DP        0/1:100:44      0/1:100:27      0/1:100:79
+3      59680175        rs1349015       C       G       .       PASS    AA=G;DP=146     GT:GQ:DP        0/1:100:44      0/1:100:28      0/1:100:75
+5      21597896        rs1603436       C       T       .       PASS    AA=.;DP=177     GT:GQ:DP        0/1:100:44      0/1:100:35      0/1:100:99
+13     20438868        rs9509473       C       G       .       PASS    AA=C;DP=122     GT:GQ:DP        0/1:100:44      0/1:23:15       0/1:100:58
+16     82631486        rs12925228      A       G       .       PASS    AA=A;DP=105     GT:GQ:DP        0/1:100:44      0/1:42:10       0/1:100:50
+5      119575272       rs11241535      A       C       .       PASS    AA=A;DP=140     GT:GQ:DP        0/1:100:44      0/1:57:21       0/1:100:73
+13     98297352        rs7986477       A       G       .       PASS    AA=a;DP=151     GT:GQ:DP        0/1:100:44      0/1:66:26       0/1:100:85
+1      197643623       rs585476        A       C       .       PASS    AA=A;DP=136;HM2;HM3     GT:GQ:DP        0/1:100:44      0/1:77:23       0/1:100:72
+18     33307185        rs56151557      C       T       .       PASS    AA=C;DP=128     GT:GQ:DP        0/1:100:44      0/1:93:18       0/1:100:66
+3      114692728       rs13098166      A       G       .       PASS    AA=A;DP=133     GT:GQ:DP        0/1:100:45      0/1:100:24      0/1:100:62
+1      77615351        rs11162329      A       C       .       PASS    AA=C;DP=165     GT:GQ:DP        0/1:100:45      0/1:100:31      0/1:100:48
+4      185136773       rs4241783       G       T       .       PASS    AA=G;DP=152     GT:GQ:DP        0/1:100:45      0/1:100:31      0/1:100:77
+11     109749132       rs7945071       G       T       .       PASS    AA=G;DP=168     GT:GQ:DP        0/1:100:45      0/1:100:37      0/1:100:86
+8      20275192        rs3892686       A       C       .       PASS    AA=a;DP=145     GT:GQ:DP        0/1:100:45      0/1:54:23       0/1:100:78
+9      126275584       .       C       T       .       PASS    AA=C;DP=175     GT:GQ:DP        0/1:100:45      0/1:58:21       0/1:100:65
+7      66494480        rs58299686      A       G       .       PASS    AA=N;DP=127     GT:GQ:DP        0/1:100:45      0/1:68:17       0/1:100:66
+19     56077214        rs8103659       A       G       .       PASS    AA=A;DP=147     GT:GQ:DP        0/1:100:45      0/1:95:26       0/1:100:81
+8      129242943       rs55886082      C       T       .       PASS    AA=C;DP=151     GT:GQ:DP        0/1:100:46      0/1:100:25      0/1:100:84
+6      108059866       rs4946842       C       T       .       PASS    AA=C;DP=152     GT:GQ:DP        0/1:100:46      0/1:88:20       0/1:100:83
+2      10473758        rs62130191      A       G       .       PASS    AA=A;DP=146     GT:GQ:DP        0/1:100:46      0/1:90:15       0/1:100:86
+8      128332630       rs6999177       C       G       .       PASS    AA=N;DP=155     GT:GQ:DP        0/1:100:47      0/1:100:34      0/1:100:80
+2      89392008        rs9309656       A       T       .       PASS    AA=.;DP=196     GT:GQ:DP        0/1:100:47      0/1:21:34       0/1:100:64
+18     23054354        .       C       G       .       PASS    AA=G;DP=167     GT:GQ:DP        0/1:100:47      0/1:78:32       0/1:100:85
+1      31869675        rs10798880      G       T       .       PASS    AA=T;DP=158;HM2;HM3     GT:GQ:DP        0/1:100:48      0/1:100:21      0/1:100:91
+17     21146363        .       C       T       .       PASS    AA=c;DP=155     GT:GQ:DP        0/1:100:49      0/1:100:31      0/1:100:75
+16     69730981        rs3114628       C       T       .       PASS    AA=T;DP=171     GT:GQ:DP        0/1:100:51      0/1:100:24      0/1:100:46
+6      32559713        .       C       T       .       PASS    AA=-;DP=148     GT:GQ:DP        0/1:100:51      0/1:36:20       0/1:100:76
+6      6654655 rs58082090      A       C       .       PASS    AA=A;DP=152     GT:GQ:DP        0/1:100:51      0/1:80:20       0/1:100:86
+7      56530311        .       C       T       .       PASS    AA=C;DP=158     GT:GQ:DP        0/1:100:53      0/1:56:20       0/1:100:85
+2      37974506        rs2707267       C       T       .       PASS    AA=C;DP=154     GT:GQ:DP        0/1:100:53      0/1:78:21       0/1:100:83
+10     47067457        rs7069401       A       G       .       PASS    AA=.;DP=170     GT:GQ:DP        0/1:100:58      0/1:100:27      0/1:100:85
+5      15977800        .       A       G       .       PASS    AA=A;DP=96      GT:GQ:DP        0/1:12:31       0/1:62:21       0/1:100:38
+1      56887051        rs10889002      C       T       .       PASS    AA=C;DP=105     GT:GQ:DP        0/1:14:13       0/1:71:26       0/1:100:66
+2      132726614       .       C       T       .       PASS    AA=.;DP=128     GT:GQ:DP        0/1:14:26       0/1:9:13        0/1:100:63
+3      55807936        .       A       T       .       PASS    AA=A;DP=67      GT:GQ:DP        0/1:15:13       0/1:7:12        0/1:100:42
+1      29585660        rs61174136      A       G       .       PASS    AA=A;DP=83      GT:GQ:DP        0/1:15:25       0/1:75:14       0/1:47:34
+2      67945544        rs35992416      A       G       .       PASS    AA=A;DP=80      GT:GQ:DP        0/1:18:16       0/1:92:16       0/1:100:36
+13     112506158       .       C       T       .       PASS    AA=c;DP=89      GT:GQ:DP        0/1:19:15       0/1:11:18       0/1:57:56
+14     27280725        rs61974391      C       G       .       PASS    AA=G;DP=98      GT:GQ:DP        0/1:19:20       0/1:68:16       0/1:100:58
+15     88006094        rs7165944       A       G       .       PASS    AA=A;DP=106     GT:GQ:DP        0/1:19:26       0/1:64:15       0/1:100:67
+5      21052959        rs7717426       A       G       .       PASS    AA=G;DP=87      GT:GQ:DP        0/1:20:14       0/1:19:19       0/1:100:54
+8      91798011        .       C       T       .       PASS    AA=C;DP=104     GT:GQ:DP        0/1:22:12       0/1:91:22       0/1:100:71
+11     99383033        rs12277376      C       G       .       PASS    AA=C;DP=93      GT:GQ:DP        0/1:22:16       0/1:82:26       0/1:100:51
+10     91739092        rs7077721       C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        0/1:22:25       0/1:79:20       0/1:100:31
+15     40011968        rs1648860       G       T       .       PASS    AA=G;DP=157     GT:GQ:DP        0/1:24:33       0/1:100:26      0/1:100:53
+1      31450874        .       C       T       .       PASS    AA=C;DP=87      GT:GQ:DP        0/1:25:18       0/1:15:12       0/1:100:58
+1      145110179       rs1348316       A       G       .       PASS    AA=G;DP=100;HM2;HM3     GT:GQ:DP        0/1:25:20       0/1:71:16       0/1:100:62
+4      3457035 rs2006791       A       G       .       PASS    AA=N;DP=105     GT:GQ:DP        0/1:25:25       0/1:21:9        0/1:100:68
+10     83468265        .       G       T       .       PASS    AA=g;DP=90      GT:GQ:DP        0/1:27:19       0/1:7:22        0/1:100:48
+2      109354647       rs11680644      C       G       .       PASS    AA=G;DP=114     GT:GQ:DP        0/1:28:24       0/1:46:23       0/1:100:67
+15     88402268        rs1506941       A       G       .       PASS    AA=G;DP=103     GT:GQ:DP        0/1:29:20       0/1:37:14       0/1:100:69
+3      10063878        .       C       T       .       PASS    AA=C;DP=122     GT:GQ:DP        0/1:29:31       0/1:100:32      0/1:74:60
+4      16584899        rs34394334      A       G       .       PASS    AA=G;DP=77      GT:GQ:DP        0/1:30:16       0/1:24:16       0/1:100:42
+12     106150204       rs7964938       C       T       .       PASS    AA=C;DP=101     GT:GQ:DP        0/1:30:21       0/1:98:26       0/1:100:42
+2      71029224        rs12620379      A       G       .       PASS    AA=A;DP=99      GT:GQ:DP        0/1:30:24       0/1:76:17       0/1:100:57
+3      97837047        rs4405933       C       G       .       PASS    AA=G;DP=102     GT:GQ:DP        0/1:30:24       0/1:89:25       0/1:100:54
+5      141860262       rs17098760      C       G       .       PASS    AA=G;DP=145     GT:GQ:DP        0/1:30:31       0/1:79:37       0/1:100:80
+3      79745445        rs4680965       A       G       .       PASS    AA=A;DP=94      GT:GQ:DP        0/1:31:15       0/1:45:21       0/1:100:59
+4      32740325        .       A       G       .       PASS    AA=A;DP=93      GT:GQ:DP        0/1:31:16       0/1:94:15       0/1:100:61
+7      95138692        rs854082        A       G       .       PASS    AA=A;DP=99      GT:GQ:DP        0/1:31:20       0/1:35:22       0/1:100:43
+1      229596721       rs11582413      C       G       .       PASS    AA=C;DP=103     GT:GQ:DP        0/1:31:23       0/1:42:14       0/1:100:68
+20     60864799        rs3848675       A       G       .       PASS    AA=A;DP=81      GT:GQ:DP        0/1:33:24       0/1:39:11       0/1:100:46
+5      29462844        .       A       G       .       PASS    AA=a;DP=139     GT:GQ:DP        0/1:34:37       0/1:57:29       0/1:100:73
+18     6605783 rs8089344       C       G       .       PASS    AA=C;DP=74      GT:GQ:DP        0/1:35:18       0/1:61:19       0/1:100:27
+11     22410780        rs2593674       C       G       .       PASS    AA=C;DP=116     GT:GQ:DP        0/1:35:26       0/1:46:20       0/1:100:70
+15     24843964        .       A       G       .       PASS    AA=A;DP=71      GT:GQ:DP        0/1:36:14       0/1:60:16       0/1:100:41
+2      192144803       .       A       T       .       PASS    AA=a;DP=62      GT:GQ:DP        0/1:36:16       0/1:30:23       0/1:76:17
+11     48296682        .       A       C       .       PASS    AA=a;DP=133     GT:GQ:DP        0/1:36:19       0/1:50:33       0/1:100:83
+13     103085396       rs1984043       A       G       .       PASS    AA=G;DP=77      GT:GQ:DP        0/1:37:10       0/1:84:13       0/1:100:53
+8      89050656        rs1477915       A       G       .       PASS    AA=G;DP=87      GT:GQ:DP        0/1:37:17       0/1:70:17       0/1:100:53
+15     95309410        rs7165723       C       T       .       PASS    AA=T;DP=80      GT:GQ:DP        0/1:37:21       0/1:34:11       0/1:100:48
+4      116730125       .       C       T       .       PASS    AA=C;DP=96      GT:GQ:DP        0/1:37:22       0/1:78:19       0/1:100:56
+2      29767630        rs10177723      A       G       .       PASS    AA=G;DP=140     GT:GQ:DP        0/1:37:26       0/1:100:31      0/1:100:83
+2      4841616 rs4355128       C       T       .       PASS    AA=c;DP=103     GT:GQ:DP        0/1:38:18       0/1:100:26      0/1:100:58
+1      5976242 rs11120990      A       G       .       PASS    AA=A;DP=104     GT:GQ:DP        0/1:38:23       0/1:21:12       0/1:100:67
+7      127665020       rs791614        A       G       .       PASS    AA=G;DP=121     GT:GQ:DP        0/1:38:29       0/1:94:24       0/1:100:70
+4      116611378       rs7677618       G       T       .       PASS    AA=T;DP=67      GT:GQ:DP        0/1:39:15       0/1:100:15      0/1:100:37
+3      150239216       rs7611297       C       G       .       PASS    AA=C;DP=83      GT:GQ:DP        0/1:39:21       0/1:27:13       0/1:100:39
+5      73538940        rs10061061      C       T       .       PASS    AA=C;DP=88      GT:GQ:DP        0/1:39:24       0/1:91:16       0/1:100:48
+1      53292052        rs60537900      C       T       .       PASS    AA=c;DP=104     GT:GQ:DP        0/1:39:27       0/1:45:19       0/1:100:49
+X      98869939        .       C       T       .       PASS    AA=C;DP=79      GT:GQ:DP        0/1:3:8 0/1:26:12       0/1:100:36
+9      77422417        rs1328572       A       G       .       PASS    AA=A;DP=101     GT:GQ:DP        0/1:40:23       0/1:100:18      0/1:100:59
+19     15970938        rs10405010      C       T       .       PASS    AA=t;DP=92      GT:GQ:DP        0/1:40:23       0/1:33:14       0/1:100:54
+1      3776605 rs12740232      C       T       .       PASS    AA=C;DP=112     GT:GQ:DP        0/1:40:29       0/1:45:11       0/1:100:70
+5      85007267        .       C       T       .       PASS    AA=C;DP=57      GT:GQ:DP        0/1:41:16       0/1:38:7        0/1:75:27
+17     73450715        rs4789519       A       C       .       PASS    AA=A;DP=120     GT:GQ:DP        0/1:41:22       0/1:100:26      0/1:100:72
+5      78362085        rs7716612       C       T       .       PASS    AA=C;DP=94      GT:GQ:DP        0/1:41:28       0/1:44:16       0/1:100:45
+13     82490649        rs2101673       A       G       .       PASS    AA=G;DP=122     GT:GQ:DP        0/1:42:20       0/1:100:19      0/1:100:83
+11     7002584 rs1038837       A       C       .       PASS    AA=C;DP=71      GT:GQ:DP        0/1:43:19       0/1:49:11       0/1:100:44
+6      92233384        rs10806445      A       C       .       PASS    AA=C;DP=110     GT:GQ:DP        0/1:43:20       0/1:100:27      0/1:100:63
+17     56735370        rs3853830       A       G       .       PASS    AA=A;DP=119     GT:GQ:DP        0/1:43:22       0/1:81:23       0/1:100:74
+2      239804721       rs554946        G       T       .       PASS    AA=T;DP=117     GT:GQ:DP        0/1:43:26       0/1:32:21       0/1:100:71
+13     81322261        rs7323365       A       G       .       PASS    AA=A;DP=66      GT:GQ:DP        0/1:44:12       0/1:77:13       0/1:100:32
+11     99002022        rs1690817       A       G       .       PASS    AA=G;DP=104     GT:GQ:DP        0/1:44:22       0/1:33:19       0/1:100:62
+5      21098784        rs10069170      A       C       .       PASS    AA=A;DP=120     GT:GQ:DP        0/1:44:23       0/1:100:25      0/1:100:71
+10     105900211       rs703333        A       G       .       PASS    AA=G;DP=158     GT:GQ:DP        0/1:44:34       0/1:86:27       0/1:100:58
+4      191077079       .       G       T       .       PASS    AA=g;DP=152     GT:GQ:DP        0/1:44:38       0/1:100:34      0/1:100:69
+8      31692107        rs13268778      A       G       .       PASS    AA=A;DP=87      GT:GQ:DP        0/1:45:21       0/1:58:23       0/1:100:43
+2      230763553       rs4973293       G       T       .       PASS    AA=G;DP=74      GT:GQ:DP        0/1:45:21       0/1:72:18       0/1:100:38
+6      54111303        rs1321884       A       G       .       PASS    AA=A;DP=118     GT:GQ:DP        0/1:45:23       0/1:30:18       0/1:100:34
+3      118437994       rs9868230       C       T       .       PASS    AA=C;DP=100     GT:GQ:DP        0/1:45:24       0/1:91:21       0/1:100:55
+7      126843278       rs9656363       C       T       .       PASS    AA=C;DP=109     GT:GQ:DP        0/1:45:25       0/1:51:21       0/1:100:63
+1      55219858        rs1549564       A       G       .       PASS    AA=N;DP=111     GT:GQ:DP        0/1:45:30       0/1:10:15       0/1:100:67
+13     18543280        .       A       G       .       PASS    AA=a;DP=169     GT:GQ:DP        0/1:45:47       0/1:53:24       0/1:100:90
+13     71518276        rs2247888       A       G       .       PASS    AA=A;DP=68      GT:GQ:DP        0/1:46:10       0/1:92:17       0/1:100:26
+1      80321639        rs6683765       C       G       .       PASS    AA=C;DP=68      GT:GQ:DP        0/1:46:12       0/1:100:21      0/1:100:24
+5      60523924        rs295544        A       G       .       PASS    AA=G;DP=115     GT:GQ:DP        0/1:46:21       0/1:100:23      0/1:100:70
+2      240803735       rs885524        A       G       .       PASS    AA=G;DP=127     GT:GQ:DP        0/1:46:26       0/1:41:14       0/1:100:89
+5      2088812 rs58974183      C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        0/1:46:31       0/1:64:20       0/1:100:67
+14     21084164        rs12891053      A       G       .       PASS    AA=A;DP=136     GT:GQ:DP        0/1:46:33       0/1:23:24       0/1:100:77
+6      43738733        rs7751728       A       G       .       PASS    AA=G;DP=112     GT:GQ:DP        0/1:46:38       0/1:41:17       0/1:100:58
+16     84676358        rs58044441      G       T       .       PASS    AA=G;DP=86      GT:GQ:DP        0/1:47:27       0/1:67:16       0/1:100:35
+13     59010761        rs9598021       A       G       .       PASS    AA=G;DP=137     GT:GQ:DP        0/1:47:34       0/1:83:13       0/1:100:91
+3      1284898 rs3772327       C       T       .       PASS    AA=C;DP=91      GT:GQ:DP        0/1:48:15       0/1:100:18      0/1:100:59
+11     123971240       rs7939816       C       T       .       PASS    AA=T;DP=110     GT:GQ:DP        0/1:48:16       0/1:100:22      0/1:100:73
+13     88004286        rs61961068      A       G       .       PASS    AA=A;DP=79      GT:GQ:DP        0/1:48:16       0/1:70:12       0/1:100:49
+10     122774992       rs11199716      C       T       .       PASS    AA=C;DP=114     GT:GQ:DP        0/1:48:24       0/1:29:17       0/1:100:72
+9      2396635 rs10119481      C       G       .       PASS    AA=C;DP=100     GT:GQ:DP        0/1:48:26       0/1:47:11       0/1:100:51
+21     43603592        rs2838283       C       T       .       PASS    AA=C;DP=107     GT:GQ:DP        0/1:48:27       0/1:16:15       0/1:100:64
+9      29251935        rs7852004       A       G       .       PASS    AA=G;DP=125     GT:GQ:DP        0/1:48:29       0/1:97:23       0/1:100:73
+6      156300888       rs9371406       C       T       .       PASS    AA=C;DP=131     GT:GQ:DP        0/1:48:39       0/1:77:14       0/1:91:78
+4      12369989        .       A       G       .       PASS    AA=A;DP=68      GT:GQ:DP        0/1:49:17       0/1:34:13       0/1:100:32
+7      11568959        rs425   C       T       .       PASS    AA=T;DP=84      GT:GQ:DP        0/1:49:20       0/1:85:17       0/1:100:48
+2      48340711        rs11695923      C       T       .       PASS    AA=T;DP=136     GT:GQ:DP        0/1:49:21       0/1:83:26       0/1:100:41
+22     48064757        rs17000753      A       G       .       PASS    AA=A;DP=127     GT:GQ:DP        0/1:49:22       0/1:77:22       0/1:100:72
+4      113895525       .       A       G       .       PASS    AA=A;DP=101     GT:GQ:DP        0/1:49:25       0/1:85:17       0/1:100:61
+5      140183616       rs4141841       C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        0/1:49:37       0/1:42:15       0/1:100:56
+18     39002939        rs11873915      A       G       .       PASS    AA=a;DP=99      GT:GQ:DP        0/1:4:12        0/1:35:31       0/1:100:42
+2      154661974       .       A       G       .       PASS    AA=A;DP=97      GT:GQ:DP        0/1:4:15        0/1:94:13       0/1:100:66
+4      21120060        rs13131360      G       T       .       PASS    AA=G;DP=100     GT:GQ:DP        0/1:4:21        0/1:94:21       0/1:100:59
+6      57365729        .       C       G       .       PASS    AA=C;DP=204     GT:GQ:DP        0/1:4:43        0/1:100:38      0/1:55:83
+X      63873876        rs9943027       C       T       .       PASS    AA=C;DP=77      GT:GQ:DP        0/1:4:5 0/1:22:18       0/1:88:23
+10     130045871       rs57877255      A       G       .       PASS    AA=A;DP=83      GT:GQ:DP        0/1:50:20       0/1:15:14       0/1:100:50
+5      124351848       rs11949937      A       C       .       PASS    AA=A;DP=110     GT:GQ:DP        0/1:50:22       0/1:97:19       0/1:100:56
+3      42051033        .       C       T       .       PASS    AA=C;DP=111     GT:GQ:DP        0/1:50:24       0/1:43:16       0/1:100:69
+4      47954907        rs2353295       A       G       .       PASS    AA=A;DP=115     GT:GQ:DP        0/1:50:27       0/1:95:18       0/1:100:70
+2      79662   rs6720561       C       T       .       PASS    AA=N;DP=67      GT:GQ:DP        0/1:50:9        0/1:67:12       0/1:100:45
+13     24972801        rs7987762       C       G       .       PASS    AA=G;DP=91      GT:GQ:DP        0/1:51:18       0/1:26:17       0/1:100:53
+6      96549993        rs633244        A       G       .       PASS    AA=A;DP=99      GT:GQ:DP        0/1:51:21       0/1:79:20       0/1:100:58
+17     76046128        rs8068613       A       G       .       PASS    AA=G;DP=126     GT:GQ:DP        0/1:51:23       0/1:100:21      0/1:100:82
+1      229467528       rs849714        A       G       .       PASS    AA=G;DP=107     GT:GQ:DP        0/1:51:23       0/1:52:21       0/1:100:65
+16     7112402 .       G       T       .       PASS    AA=G;DP=100     GT:GQ:DP        0/1:52:14       0/1:16:14       0/1:100:73
+1      38989448        rs6657245       A       G       .       PASS    AA=G;DP=71      GT:GQ:DP        0/1:52:16       0/1:41:19       0/1:100:31
+7      12532632        rs10251130      A       G       .       PASS    AA=A;DP=70      GT:GQ:DP        0/1:53:13       0/1:97:22       0/1:100:28
+6      81313424        rs57213893      G       T       .       PASS    AA=G;DP=81      GT:GQ:DP        0/1:53:15       0/1:86:15       0/1:100:51
+5      109819408       rs57353550      A       G       .       PASS    AA=A;DP=84      GT:GQ:DP        0/1:53:17       0/1:100:19      0/1:100:48
+6      55535668        rs10807496      A       G       .       PASS    AA=G;DP=107     GT:GQ:DP        0/1:53:18       0/1:100:30      0/1:100:59
+8      25531359        rs13280167      A       G       .       PASS    AA=G;DP=75      GT:GQ:DP        0/1:53:29       0/1:78:11       0/1:100:29
+5      27952040        rs1991501       C       G       .       PASS    AA=G;DP=75      GT:GQ:DP        0/1:54:12       0/1:71:17       0/1:100:46
+4      138912820       rs6822153       C       T       .       PASS    AA=C;DP=66      GT:GQ:DP        0/1:54:14       0/1:89:24       0/1:100:30
+14     45047939        rs56315017      A       G       .       PASS    AA=G;DP=106     GT:GQ:DP        0/1:54:21       0/1:100:25      0/1:100:57
+2      53399362        rs10167230      C       G       .       PASS    AA=g;DP=126     GT:GQ:DP        0/1:54:21       0/1:100:25      0/1:100:68
+10     74427256        rs7078081       C       T       .       PASS    AA=T;DP=90      GT:GQ:DP        0/1:54:23       0/1:40:20       0/1:100:48
+6      31153553        rs2523860       C       G       .       PASS    AA=c;DP=129     GT:GQ:DP        0/1:54:24       0/1:90:23       0/1:100:79
+16     7445030 rs9936248       A       C       .       PASS    AA=C;DP=113     GT:GQ:DP        0/1:54:26       0/1:100:22      0/1:100:68
+11     20056837        .       C       G       .       PASS    AA=C;DP=119     GT:GQ:DP        0/1:54:27       0/1:64:30       0/1:100:62
+6      84050288        rs1170504       A       C       .       PASS    AA=C;DP=110     GT:GQ:DP        0/1:54:30       0/1:61:17       0/1:100:60
+11     83248462        rs10898162      A       C       .       PASS    AA=A;DP=84      GT:GQ:DP        0/1:55:16       0/1:22:8        0/1:100:60
+1      46146746        rs7526678       A       G       .       PASS    AA=A;DP=84;HM2  GT:GQ:DP        0/1:55:18       0/1:11:8        0/1:100:58
+7      149375464       rs34447086      A       G       .       PASS    AA=G;DP=74      GT:GQ:DP        0/1:55:25       0/1:3:7 0/1:100:30
+2      201238985       rs35778058      A       T       .       PASS    AA=T;DP=114     GT:GQ:DP        0/1:55:29       0/1:100:19      0/1:100:54
+4      57326805        rs7658459       A       G       .       PASS    AA=A;DP=95      GT:GQ:DP        0/1:55:29       0/1:48:17       0/1:100:49
+5      20827033        .       A       C       .       PASS    AA=A;DP=173     GT:GQ:DP        0/1:55:30       0/1:100:39      0/1:100:52
+3      149972072       rs1586836       C       G       .       PASS    AA=C;DP=91      GT:GQ:DP        0/1:55:31       0/1:74:20       0/1:100:41
+12     30123313        rs1554432       C       T       .       PASS    AA=T;DP=78      GT:GQ:DP        0/1:55:8        0/1:92:15       0/1:100:54
+13     71774359        rs340575        A       C       .       PASS    AA=C;DP=86      GT:GQ:DP        0/1:56:16       0/1:100:19      0/1:100:49
+2      194881824       rs10208816      C       G       .       PASS    AA=c;DP=100     GT:GQ:DP        0/1:56:17       0/1:100:27      0/1:100:50
+5      40493649        rs6874477       C       T       .       PASS    AA=C;DP=84      GT:GQ:DP        0/1:56:17       0/1:61:16       0/1:100:39
+7      134880971       rs7782989       C       T       .       PASS    AA=C;DP=98      GT:GQ:DP        0/1:56:18       0/1:12:18       0/1:100:61
+15     96642821        rs11631964      A       G       .       PASS    AA=A;DP=107     GT:GQ:DP        0/1:56:26       0/1:15:17       0/1:100:64
+18     11495086        rs9303735       C       T       .       PASS    AA=C;DP=107     GT:GQ:DP        0/1:56:29       0/1:68:17       0/1:100:48
+20     41890653        .       A       G       .       PASS    AA=A;DP=150     GT:GQ:DP        0/1:56:41       0/1:73:20       0/1:100:48
+6      102442933       rs2051445       G       T       .       PASS    AA=G;DP=103     GT:GQ:DP        0/1:57:13       0/1:100:26      0/1:100:60
+3      189823767       rs9817339       C       T       .       PASS    AA=T;DP=73      GT:GQ:DP        0/1:57:16       0/1:61:16       0/1:100:42
+1      73920481        rs4364822       A       G       .       PASS    AA=N;DP=72      GT:GQ:DP        0/1:57:18       0/1:85:17       0/1:100:28
+2      105431938       rs884876        A       G       .       PASS    AA=G;DP=101     GT:GQ:DP        0/1:57:20       0/1:46:14       0/1:100:60
+21     32423908        .       C       T       .       PASS    AA=C;DP=131     GT:GQ:DP        0/1:57:28       0/1:100:24      0/1:100:80
+3      177440157       rs17689472      A       G       .       PASS    AA=A;DP=94      GT:GQ:DP        0/1:58:11       0/1:100:22      0/1:100:59
+18     11932412        rs8098437       C       T       .       PASS    AA=c;DP=73      GT:GQ:DP        0/1:58:15       0/1:42:14       0/1:100:45
+12     105247515       rs11112941      C       T       .       PASS    AA=T;DP=108     GT:GQ:DP        0/1:58:21       0/1:84:19       0/1:100:71
+1      15219950        rs10927632      A       G       .       PASS    AA=G;DP=94;HM2;HM3      GT:GQ:DP        0/1:58:23       0/1:76:14       0/1:100:57
+11     97896375        rs12276745      C       T       .       PASS    AA=c;DP=84      GT:GQ:DP        0/1:59:14       0/1:86:16       0/1:100:54
+1      153166771       .       A       C       .       PASS    AA=A;DP=69      GT:GQ:DP        0/1:59:16       0/1:32:13       0/1:14:39
+17     76918399        rs6565558       A       G       .       PASS    AA=A;DP=97      GT:GQ:DP        0/1:59:18       0/1:11:9        0/1:100:69
+3      3842778 rs13086561      A       G       .       PASS    AA=A;DP=109     GT:GQ:DP        0/1:59:19       0/1:100:22      0/1:100:67
+19     52726310        .       G       T       .       PASS    AA=G;DP=114     GT:GQ:DP        0/1:5:33        0/1:41:28       0/1:100:44
+1      73570515        rs2145784       A       T       .       PASS    AA=T;DP=69      GT:GQ:DP        0/1:60:12       0/1:100:17      0/1:100:41
+2      212885476       rs6721859       A       G       .       PASS    AA=A;DP=67      GT:GQ:DP        0/1:60:14       0/1:63:18       0/1:100:23
+5      143565300       rs3797084       C       T       .       PASS    AA=C;DP=86      GT:GQ:DP        0/1:60:17       0/1:62:9        0/1:100:55
+7      138697369       rs28666017      A       T       .       PASS    AA=A;DP=73      GT:GQ:DP        0/1:60:18       0/1:95:14       0/1:100:26
+10     21288965        rs45549131      A       G       .       PASS    AA=A;DP=66      GT:GQ:DP        0/1:60:19       0/1:100:23      0/1:97:14
+7      68193915        .       C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        0/1:60:21       0/1:100:19      0/1:100:76
+9      96852161        rs4743982       A       G       .       PASS    AA=A;DP=121     GT:GQ:DP        0/1:60:24       0/1:100:24      0/1:100:76
+1      67526096        rs1495965       C       T       .       PASS    AA=C;DP=116;HM2;HM3     GT:GQ:DP        0/1:60:25       0/1:100:35      0/1:100:58
+2      132826714       rs8179750       C       G       .       PASS    AA=c;DP=111     GT:GQ:DP        0/1:60:30       0/1:53:17       0/1:18:46
+19     47593245        rs10423959      A       T       .       PASS    AA=N;DP=129     GT:GQ:DP        0/1:61:26       0/1:62:17       0/1:100:86
+19     43162493        rs833895        C       T       .       PASS    AA=c;DP=100     GT:GQ:DP        0/1:61:29       0/1:13:19       0/1:100:45
+15     68801867        rs28650244      C       T       .       PASS    AA=C;DP=102     GT:GQ:DP        0/1:61:29       0/1:75:22       0/1:100:41
+1      151642769       rs6673905       C       T       .       PASS    AA=T;DP=111;HM2 GT:GQ:DP        0/1:61:30       0/1:97:19       0/1:100:64
+5      159923892       .       A       T       .       PASS    AA=A;DP=128     GT:GQ:DP        0/1:61:31       0/1:36:22       0/1:100:75
+8      3737501 rs4875794       A       C       .       PASS    AA=A;DP=101     GT:GQ:DP        0/1:62:12       0/1:100:28      0/1:100:62
+6      24892074        rs9467317       G       T       .       PASS    AA=G;DP=78      GT:GQ:DP        0/1:62:14       0/1:100:21      0/1:100:40
+7      41184126        rs29517 A       G       .       PASS    AA=A;DP=92      GT:GQ:DP        0/1:62:15       0/1:71:25       0/1:100:52
+21     24587209        rs2226429       C       T       .       PASS    AA=T;DP=89      GT:GQ:DP        0/1:62:19       0/1:69:21       0/1:100:50
+10     56673925        rs7068963       G       T       .       PASS    AA=g;DP=99      GT:GQ:DP        0/1:62:20       0/1:100:20      0/1:100:55
+13     85041529        rs627851        A       G       .       PASS    AA=G;DP=98      GT:GQ:DP        0/1:62:21       0/1:79:26       0/1:100:50
+5      18584986        rs7729062       A       C       .       PASS    AA=a;DP=121     GT:GQ:DP        0/1:62:21       0/1:94:27       0/1:100:66
+15     22564288        rs2123683       A       G       .       PASS    AA=N;DP=77      GT:GQ:DP        0/1:63:14       0/1:59:20       0/1:100:43
+9      75818964        .       A       G       .       PASS    AA=A;DP=78      GT:GQ:DP        0/1:63:14       0/1:91:14       0/1:100:49
+6      24198572        rs1402406       A       G       .       PASS    AA=G;DP=98      GT:GQ:DP        0/1:63:15       0/1:71:14       0/1:100:70
+1      224662642       rs7531668       A       T       .       PASS    AA=N;DP=84      GT:GQ:DP        0/1:63:17       0/1:52:9        0/1:100:58
+12     83474405        rs7953200       A       G       .       PASS    AA=G;DP=84      GT:GQ:DP        0/1:63:18       0/1:84:15       0/1:100:44
+5      133669754       rs17167441      A       T       .       PASS    AA=T;DP=81      GT:GQ:DP        0/1:63:18       0/1:95:16       0/1:100:47
+2      80744894        rs12465917      C       T       .       PASS    AA=T;DP=104     GT:GQ:DP        0/1:63:21       0/1:100:30      0/1:100:53
+9      137408416       rs58796696      C       T       .       PASS    AA=C;DP=86      GT:GQ:DP        0/1:63:23       0/1:8:12        0/1:100:44
+15     75905679        rs7182697       G       T       .       PASS    AA=G;DP=111     GT:GQ:DP        0/1:63:27       0/1:50:18       0/1:100:65
+8      2269866 rs4242543       G       T       .       PASS    AA=T;DP=177     GT:GQ:DP        0/1:63:34       0/1:100:39      0/1:100:47
+14     82613908        rs2888281       A       T       .       PASS    AA=A;DP=87      GT:GQ:DP        0/1:64:15       0/1:62:14       0/1:100:59
+11     113902298       rs2366362       A       G       .       PASS    AA=G;DP=78      GT:GQ:DP        0/1:64:17       0/1:100:25      0/1:100:27
+4      4331198 rs28473270      C       T       .       PASS    AA=C;DP=114     GT:GQ:DP        0/1:64:21       0/1:100:24      0/1:100:69
+11     76678674        rs10082618      A       T       .       PASS    AA=T;DP=84      GT:GQ:DP        0/1:64:22       0/1:18:7        0/1:100:56
+21     41997554        .       A       G       .       PASS    AA=a;DP=105     GT:GQ:DP        0/1:64:22       0/1:55:15       0/1:100:67
+14     104005196       .       C       T       .       PASS    AA=C;DP=91      GT:GQ:DP        0/1:64:23       0/1:66:12       0/1:100:56
+9      84968061        rs7043147       A       G       .       PASS    AA=A;DP=144     GT:GQ:DP        0/1:64:36       0/1:96:28       0/1:100:80
+4      157624707       rs2101588       A       G       .       PASS    AA=A;DP=116     GT:GQ:DP        0/1:65:15       0/1:80:28       0/1:100:72
+18     1983290 rs6505989       C       G       .       PASS    AA=G;DP=106     GT:GQ:DP        0/1:65:16       0/1:44:21       0/1:100:69
+9      28753390        rs12345538      A       C       .       PASS    AA=a;DP=81      GT:GQ:DP        0/1:65:16       0/1:77:19       0/1:100:45
+3      174252974       rs6445094       A       G       .       PASS    AA=G;DP=114     GT:GQ:DP        0/1:65:18       0/1:82:32       0/1:100:64
+15     96684671        rs8038591       A       G       .       PASS    AA=A;DP=97      GT:GQ:DP        0/1:65:19       0/1:100:22      0/1:100:55
+5      108879584       rs17161881      A       C       .       PASS    AA=A;DP=102     GT:GQ:DP        0/1:65:21       0/1:69:19       0/1:100:62
+12     27028455        rs7299682       A       C       .       PASS    AA=C;DP=92      GT:GQ:DP        0/1:65:23       0/1:34:15       0/1:100:54
+10     29442950        rs4749397       A       G       .       PASS    AA=a;DP=129     GT:GQ:DP        0/1:65:25       0/1:50:19       0/1:100:41
+21     36283464        .       C       T       .       PASS    AA=C;DP=103     GT:GQ:DP        0/1:65:26       0/1:60:16       0/1:100:62
+22     35386331        rs6000371       A       G       .       PASS    AA=G;DP=79      GT:GQ:DP        0/1:65:32       0/1:37:13       0/1:100:27
+7      158748423       .       A       T       .       PASS    AA=.;DP=96      GT:GQ:DP        0/1:66:19       0/1:68:20       0/1:100:56
+20     41107551        rs3091990       A       C       .       PASS    AA=A;DP=96      GT:GQ:DP        0/1:66:22       0/1:65:19       0/1:100:56
+1      13671383        rs3013098       A       G       .       PASS    AA=G;DP=121     GT:GQ:DP        0/1:66:25       0/1:77:20       0/1:100:78
+13     99948927        rs9518085       C       T       .       PASS    AA=C;DP=124     GT:GQ:DP        0/1:66:28       0/1:100:25      0/1:100:70
+3      45043078        rs2301282       A       G       .       PASS    AA=A;DP=127     GT:GQ:DP        0/1:66:31       0/1:54:16       0/1:100:81
+2      189422  rs400040        G       T       .       PASS    AA=T;DP=114     GT:GQ:DP        0/1:66:33       0/1:15:15       0/1:100:63
+6      57450330        rs13204229      C       T       .       PASS    AA=C;DP=157     GT:GQ:DP        0/1:66:39       0/1:100:41      0/1:100:54
+2      195070559       rs2360101       C       T       .       PASS    AA=C;DP=73      GT:GQ:DP        0/1:67:14       0/1:45:9        0/1:100:48
+4      41334602        .       A       G       .       PASS    AA=A;DP=100     GT:GQ:DP        0/1:67:15       0/1:100:24      0/1:100:61
+9      90747291        rs9410419       A       G       .       PASS    AA=G;DP=123     GT:GQ:DP        0/1:67:17       0/1:16:23       0/1:100:83
+4      18603823        rs207392        A       C       .       PASS    AA=C;DP=86      GT:GQ:DP        0/1:67:19       0/1:100:20      0/1:100:48
+5      165187014       rs10043418      C       T       .       PASS    AA=C;DP=106     GT:GQ:DP        0/1:67:22       0/1:75:19       0/1:100:64
+1      17597354        rs12134662      A       G       .       PASS    AA=A;DP=114     GT:GQ:DP        0/1:67:38       0/1:63:16       0/1:100:60
+2      194622448       .       A       G       .       PASS    AA=-;DP=66      GT:GQ:DP        0/1:68:13       0/1:39:16       0/1:100:32
+5      72488643        rs7445131       A       G       .       PASS    AA=A;DP=71      GT:GQ:DP        0/1:68:17       0/1:85:19       0/1:100:28
+9      110645104       rs12552409      C       T       .       PASS    AA=T;DP=107     GT:GQ:DP        0/1:68:20       0/1:90:18       0/1:100:69
+5      85475976        rs12656212      G       T       .       PASS    AA=T;DP=85      GT:GQ:DP        0/1:68:21       0/1:61:13       0/1:100:53
+4      89174867        rs2725223       C       T       .       PASS    AA=C;DP=109     GT:GQ:DP        0/1:68:27       0/1:35:26       0/1:100:34
+3      30242359        .       A       G       .       PASS    AA=A;DP=117     GT:GQ:DP        0/1:68:30       0/1:100:27      0/1:100:57
+13     61477650        .       C       T       .       PASS    AA=C;DP=93      GT:GQ:DP        0/1:69:11       0/1:100:17      0/1:100:65
+20     9280263 rs6039444       C       T       .       PASS    AA=T;DP=101     GT:GQ:DP        0/1:69:21       0/1:100:24      0/1:100:58
+10     79914974        rs3928165       C       T       .       PASS    AA=T;DP=95      GT:GQ:DP        0/1:69:21       0/1:80:21       0/1:100:53
+2      72281996        rs41388 A       G       .       PASS    AA=A;DP=109     GT:GQ:DP        0/1:69:23       0/1:100:24      0/1:100:60
+7      6445956 rs7806655       C       T       .       PASS    AA=C;DP=102     GT:GQ:DP        0/1:69:23       0/1:94:15       0/1:100:55
+1      1899540 rs6681305       C       T       .       PASS    AA=C;DP=85      GT:GQ:DP        0/1:69:24       0/1:40:9        0/1:100:51
+13     77380303        rs17068547      A       G       .       PASS    AA=A;DP=105     GT:GQ:DP        0/1:69:31       0/1:100:22      0/1:100:51
+10     6357765 .       A       G       .       PASS    AA=A;DP=123     GT:GQ:DP        0/1:69:35       0/1:82:23       0/1:100:61
+12     126968793       .       C       G       .       PASS    AA=-;DP=80      GT:GQ:DP        0/1:6:15        0/1:30:20       0/1:100:39
+14     105527594       .       G       T       .       PASS    AA=.;DP=91      GT:GQ:DP        0/1:6:20        0/1:67:14       0/1:84:58
+14     46199576        rs1462394       C       T       .       PASS    AA=c;DP=69      GT:GQ:DP        0/1:6:9 0/1:15:12       0/1:100:48
+8      15318096        rs1390058       A       T       .       PASS    AA=a;DP=89      GT:GQ:DP        0/1:70:17       0/1:100:23      0/1:100:48
+15     23774687        rs6576496       A       G       .       PASS    AA=G;DP=88      GT:GQ:DP        0/1:70:17       0/1:4:19        0/1:100:52
+6      81668665        rs7743382       C       T       .       PASS    AA=T;DP=93      GT:GQ:DP        0/1:70:20       0/1:63:24       0/1:100:50
+10     61531241        rs12254725      C       T       .       PASS    AA=C;DP=112     GT:GQ:DP        0/1:70:20       0/1:84:30       0/1:100:62
+2      118424754       rs7578387       C       T       .       PASS    AA=C;DP=121     GT:GQ:DP        0/1:70:21       0/1:25:20       0/1:100:80
+5      109767543       rs58270372      G       T       .       PASS    AA=G;DP=100     GT:GQ:DP        0/1:70:23       0/1:100:23      0/1:100:54
+16     58130345        .       A       C       .       PASS    AA=C;DP=122     GT:GQ:DP        0/1:70:27       0/1:100:27      0/1:100:68
+7      151617544       rs34384855      C       T       .       PASS    AA=C;DP=109     GT:GQ:DP        0/1:70:34       0/1:35:30       0/1:10:46
+11     56227316        rs12808258      G       T       .       PASS    AA=G;DP=162     GT:GQ:DP        0/1:70:36       0/1:89:36       0/1:100:81
+2      128487564       rs4392195       C       G       .       PASS    AA=G;DP=126     GT:GQ:DP        0/1:70:37       0/1:100:25      0/1:100:67
+4      34550641        rs1615366       A       T       .       PASS    AA=T;DP=68      GT:GQ:DP        0/1:71:10       0/1:73:18       0/1:100:38
+7      142304016       rs4987555       C       T       .       PASS    AA=C;DP=89      GT:GQ:DP        0/1:71:21       0/1:17:18       0/1:100:49
+2      199764217       rs7573661       A       G       .       PASS    AA=A;DP=70      GT:GQ:DP        0/1:71:22       0/1:100:20      0/1:88:17
+1      85482503        rs7531640       C       T       .       PASS    AA=T;DP=113;HM2;HM3     GT:GQ:DP        0/1:71:22       0/1:89:22       0/1:100:71
+11     1567788 rs6578539       C       T       .       PASS    AA=C;DP=130     GT:GQ:DP        0/1:71:23       0/1:40:25       0/1:100:83
+1      55695265        rs12749404      A       G       .       PASS    AA=A;DP=116     GT:GQ:DP        0/1:71:23       0/1:73:19       0/1:100:74
+11     122527293       rs11219031      A       G       .       PASS    AA=G;DP=130     GT:GQ:DP        0/1:71:23       0/1:78:21       0/1:100:85
+2      166525584       rs28895971      C       G       .       PASS    AA=G;DP=109     GT:GQ:DP        0/1:71:24       0/1:6:16        0/1:100:68
+6      113130095       rs1378699       C       T       .       PASS    AA=C;DP=117     GT:GQ:DP        0/1:71:25       0/1:33:13       0/1:100:79
+10     119980629       rs7908418       A       G       .       PASS    AA=A;DP=70      GT:GQ:DP        0/1:72:17       0/1:22:11       0/1:100:42
+11     42095090        rs7949634       C       T       .       PASS    AA=C;DP=108     GT:GQ:DP        0/1:72:22       0/1:31:14       0/1:100:69
+3      102620192       rs4508750       A       G       .       PASS    AA=A;DP=105     GT:GQ:DP        0/1:72:24       0/1:51:25       0/1:100:56
+3      154287999       rs528581        A       C       .       PASS    AA=A;DP=125     GT:GQ:DP        0/1:72:26       0/1:100:20      0/1:100:40
+20     48675014        rs6020643       G       T       .       PASS    AA=G;DP=107     GT:GQ:DP        0/1:72:30       0/1:15:16       0/1:100:62
+6      124320447       .       C       T       .       PASS    AA=C;DP=105     GT:GQ:DP        0/1:72:31       0/1:82:20       0/1:100:54
+5      98528528        rs10068334      A       G       .       PASS    AA=A;DP=75      GT:GQ:DP        0/1:73:12       0/1:44:14       0/1:100:49
+4      12285305        rs7697553       A       C       .       PASS    AA=A;DP=82      GT:GQ:DP        0/1:73:15       0/1:61:18       0/1:100:51
+17     8069885 rs8078338       A       G       .       PASS    AA=A;DP=80      GT:GQ:DP        0/1:73:16       0/1:55:9        0/1:100:43
+3      980938  .       C       T       .       PASS    AA=C;DP=117     GT:GQ:DP        0/1:73:17       0/1:81:19       0/1:100:81
+9      29131394        rs10812994      A       T       .       PASS    AA=A;DP=112     GT:GQ:DP        0/1:73:20       0/1:49:18       0/1:100:65
+2      129222125       rs3907873       A       G       .       PASS    AA=G;DP=114     GT:GQ:DP        0/1:73:21       0/1:64:23       0/1:100:70
+2      205544318       rs236837        A       T       .       PASS    AA=T;DP=110     GT:GQ:DP        0/1:73:22       0/1:60:23       0/1:100:67
+4      132507931       rs2136131       A       G       .       PASS    AA=G;DP=101     GT:GQ:DP        0/1:73:22       0/1:72:20       0/1:100:57
+3      6772607 rs9855323       A       G       .       PASS    AA=N;DP=96      GT:GQ:DP        0/1:73:23       0/1:32:23       0/1:100:39
+18     10554051        rs7234815       C       T       .       PASS    AA=C;DP=128     GT:GQ:DP        0/1:73:25       0/1:79:28       0/1:100:79
+20     35232986        .       C       T       .       PASS    AA=c;DP=122     GT:GQ:DP        0/1:73:28       0/1:100:28      0/1:100:74
+2      221433082       rs2444838       A       G       .       PASS    AA=A;DP=141     GT:GQ:DP        0/1:73:29       0/1:100:27      0/1:100:41
+21     46809572        .       C       T       .       PASS    AA=T;DP=132     GT:GQ:DP        0/1:73:35       0/1:45:21       0/1:100:75
+1      203075200       rs16854508      C       T       .       PASS    AA=C;DP=131;HM2 GT:GQ:DP        0/1:73:39       0/1:36:19       0/1:100:72
+11     48304667        .       A       C       .       PASS    AA=a;DP=172     GT:GQ:DP        0/1:73:47       0/1:87:43       0/1:100:78
+8      83864388        rs999463        A       G       .       PASS    AA=G;DP=94      GT:GQ:DP        0/1:74:19       0/1:100:17      0/1:100:58
+18     3736870 rs9962409       G       T       .       PASS    AA=G;DP=105     GT:GQ:DP        0/1:74:22       0/1:100:21      0/1:100:60
+13     24107409        rs1998834       C       T       .       PASS    AA=C;DP=125     GT:GQ:DP        0/1:74:23       0/1:93:30       0/1:100:72
+1      73192245        rs4584349       C       T       .       PASS    AA=C;DP=92;HM2  GT:GQ:DP        0/1:74:26       0/1:93:16       0/1:100:52
+13     37103422        rs41473348      C       T       .       PASS    AA=C;DP=103     GT:GQ:DP        0/1:74:27       0/1:31:13       0/1:100:67
+20     10031191        rs2327239       A       T       .       PASS    AA=A;DP=112     GT:GQ:DP        0/1:74:31       0/1:78:20       0/1:100:63
+10     10959647        rs11256887      A       G       .       PASS    AA=A;DP=137     GT:GQ:DP        0/1:74:32       0/1:100:28      0/1:100:77
+5      3132525 .       C       T       .       PASS    AA=C;DP=99      GT:GQ:DP        0/1:74:32       0/1:7:10        0/1:100:57
+6      6590725 rs4960226       A       G       .       PASS    AA=a;DP=151     GT:GQ:DP        0/1:74:41       0/1:77:13       0/1:100:98
+18     33736209        rs4799469       A       C       .       PASS    AA=C;DP=64      GT:GQ:DP        0/1:75:12       0/1:94:18       0/1:100:27
+4      112316799       rs13108741      C       T       .       PASS    AA=C;DP=103     GT:GQ:DP        0/1:75:14       0/1:100:27      0/1:100:61
+9      493175  rs12002163      C       G       .       PASS    AA=C;DP=99      GT:GQ:DP        0/1:75:16       0/1:100:20      0/1:100:64
+1      181972898       rs10911427      A       G       .       PASS    AA=A;DP=107     GT:GQ:DP        0/1:75:17       0/1:87:23       0/1:100:68
+7      141762024       .       A       G       .       PASS    AA=A;DP=101     GT:GQ:DP        0/1:75:18       0/1:100:23      0/1:100:63
+5      89681593        rs11959160      A       C       .       PASS    AA=A;DP=100     GT:GQ:DP        0/1:75:18       0/1:90:18       0/1:100:46
+6      133712568       rs1886982       A       G       .       PASS    AA=G;DP=129     GT:GQ:DP        0/1:75:23       0/1:100:30      0/1:100:80
+19     62156824        rs12052176      A       G       .       PASS    AA=G;DP=97      GT:GQ:DP        0/1:75:23       0/1:73:19       0/1:100:55
+5      55628566        rs4700222       C       T       .       PASS    AA=c;DP=102     GT:GQ:DP        0/1:75:28       0/1:29:15       0/1:100:58
+5      74496024        .       C       T       .       PASS    AA=C;DP=111     GT:GQ:DP        0/1:75:29       0/1:100:34      0/1:100:48
+1      153791782       .       C       T       .       PASS    AA=T;DP=94      GT:GQ:DP        0/1:75:30       0/1:87:31       0/1:100:23
+2      237363626       rs56792804      C       T       .       PASS    AA=C;DP=116     GT:GQ:DP        0/1:75:34       0/1:84:25       0/1:100:58
+3      11745135        rs6782912       C       T       .       PASS    AA=c;DP=132     GT:GQ:DP        0/1:75:36       0/1:4:16        0/1:100:82
+6      97771706        rs13195596      A       G       .       PASS    AA=A;DP=71      GT:GQ:DP        0/1:76:13       0/1:68:10       0/1:100:48
+5      30357172        rs4608933       C       T       .       PASS    AA=C;DP=86      GT:GQ:DP        0/1:76:14       0/1:56:20       0/1:100:53
+4      59925240        rs2137020       C       T       .       PASS    AA=c;DP=119     GT:GQ:DP        0/1:76:19       0/1:100:29      0/1:100:69
+13     103727396       .       A       G       .       PASS    AA=G;DP=70      GT:GQ:DP        0/1:76:20       0/1:53:19       0/1:100:22
+6      70490515        rs1902651       A       G       .       PASS    AA=A;DP=93      GT:GQ:DP        0/1:76:24       0/1:77:14       0/1:100:55
+16     52911221        rs58719980      A       G       .       PASS    AA=A;DP=140     GT:GQ:DP        0/1:76:25       0/1:67:13       0/1:100:58
+20     60993136        .       C       T       .       PASS    AA=c;DP=102     GT:GQ:DP        0/1:76:35       0/1:40:16       0/1:100:45
+16     59669909        rs7197135       A       C       .       PASS    AA=A;DP=68      GT:GQ:DP        0/1:77:14       0/1:63:18       0/1:100:29
+1      239429475       rs2815876       C       T       .       PASS    AA=T;DP=93;HM2;HM3      GT:GQ:DP        0/1:77:15       0/1:92:12       0/1:100:65
+14     105671477       .       A       G       .       PASS    AA=.;DP=97      GT:GQ:DP        0/1:77:20       0/1:53:14       0/1:82:64
+6      37440535        .       A       G       .       PASS    AA=A;DP=98      GT:GQ:DP        0/1:77:23       0/1:66:22       0/1:100:53
+20     26108208        .       A       T       .       PASS    AA=T;DP=99      GT:GQ:DP        0/1:77:27       0/1:12:26       0/1:100:46
+12     107428301       rs11113961      C       T       .       PASS    AA=C;DP=94      GT:GQ:DP        0/1:77:33       0/1:40:14       0/1:100:50
+6      168355266       rs9455607       A       C       .       PASS    AA=A;DP=101     GT:GQ:DP        0/1:78:14       0/1:100:24      0/1:100:65
+3      180023739       rs6765556       A       G       .       PASS    AA=G;DP=84      GT:GQ:DP        0/1:78:21       0/1:100:18      0/1:100:43
+2      37250284        rs28494956      C       T       .       PASS    AA=c;DP=68      GT:GQ:DP        0/1:78:21       0/1:11:15       0/1:80:25
+2      1832858 rs28566053      G       T       .       PASS    AA=G;DP=105     GT:GQ:DP        0/1:78:21       0/1:54:13       0/1:100:69
+1      190993687       rs7525732       C       T       .       PASS    AA=C;DP=134;HM2 GT:GQ:DP        0/1:78:22       0/1:100:29      0/1:100:87
+1      224951150       rs3768398       A       G       .       PASS    AA=G;DP=98;HM2  GT:GQ:DP        0/1:78:25       0/1:45:18       0/1:100:56
+1      151719455       rs1555885       A       G       .       PASS    AA=a;DP=119;HM2;HM3     GT:GQ:DP        0/1:78:25       0/1:93:20       0/1:100:73
+17     62378747        rs1109086       A       G       .       PASS    AA=A;DP=167     GT:GQ:DP        0/1:78:34       0/1:90:33       0/1:100:58
+3      195675931       rs6768884       A       G       .       PASS    AA=A;DP=108     GT:GQ:DP        0/1:79:14       0/1:37:24       0/1:100:72
+4      21679398        rs7677506       A       T       .       PASS    AA=a;DP=57      GT:GQ:DP        0/1:79:14       0/1:67:14       0/1:56:23
+1      189243563       rs7534290       G       T       .       PASS    AA=T;DP=89;HM2  GT:GQ:DP        0/1:79:15       0/1:60:13       0/1:100:60
+18     38723389        .       A       G       .       PASS    AA=A;DP=87      GT:GQ:DP        0/1:79:17       0/1:100:20      0/1:100:32
+13     42506386        .       A       G       .       PASS    AA=-;DP=58      GT:GQ:DP        0/1:79:17       0/1:67:13       0/1:100:23
+14     70727277        rs11850267      A       G       .       PASS    AA=G;DP=100     GT:GQ:DP        0/1:79:19       0/1:90:24       0/1:100:53
+8      91858140        .       A       G       .       PASS    AA=A;DP=139     GT:GQ:DP        0/1:79:21       0/1:44:27       0/1:100:92
+18     14977478        .       C       T       .       PASS    AA=c;DP=108     GT:GQ:DP        0/1:79:22       0/1:86:21       0/1:100:52
+4      118472557       rs17861756      C       T       .       PASS    AA=T;DP=126     GT:GQ:DP        0/1:79:24       0/1:81:16       0/1:100:85
+1      245276599       rs4971315       A       T       .       PASS    AA=A;DP=118     GT:GQ:DP        0/1:79:34       0/1:85:19       0/1:100:63
+2      217094181       rs487276        A       G       .       PASS    AA=G;DP=165     GT:GQ:DP        0/1:79:36       0/1:80:26       0/1:100:102
+5      98953580        rs2682153       C       T       .       PASS    AA=C;DP=98      GT:GQ:DP        0/1:7:16        0/1:94:23       0/1:100:60
+8      79045288        rs4626583       C       T       .       PASS    AA=T;DP=83      GT:GQ:DP        0/1:80:14       0/1:100:17      0/1:100:55
+16     7495354 rs12598763      G       T       .       PASS    AA=G;DP=115     GT:GQ:DP        0/1:80:19       0/1:100:21      0/1:100:77
+1      189062704       rs1780664       A       G       .       PASS    AA=A;DP=78      GT:GQ:DP        0/1:80:19       0/1:100:23      0/1:85:35
+3      59753311        rs2629881       C       T       .       PASS    AA=T;DP=92      GT:GQ:DP        0/1:80:20       0/1:100:21      0/1:100:50
+14     25293638        rs1956770       C       T       .       PASS    AA=C;DP=118     GT:GQ:DP        0/1:80:20       0/1:100:22      0/1:100:79
+7      66221345        rs6460322       A       T       .       PASS    AA=A;DP=95      GT:GQ:DP        0/1:80:25       0/1:100:20      0/1:100:49
+7      148812025       rs10261861      C       T       .       PASS    AA=C;DP=85      GT:GQ:DP        0/1:80:26       0/1:53:10       0/1:100:50
+4      73689836        rs1518485       C       T       .       PASS    AA=C;DP=114     GT:GQ:DP        0/1:80:27       0/1:67:24       0/1:100:62
+8      25784622        rs57451558      C       T       .       PASS    AA=C;DP=121     GT:GQ:DP        0/1:80:29       0/1:47:20       0/1:100:74
+19     1485191 rs10775585      C       T       .       PASS    AA=C;DP=130     GT:GQ:DP        0/1:80:30       0/1:70:17       0/1:100:40
+20     219336  .       A       G       .       PASS    AA=a;DP=108     GT:GQ:DP        0/1:80:31       0/1:16:14       0/1:100:64
+10     125985935       .       A       G       .       PASS    AA=A;DP=143     GT:GQ:DP        0/1:80:35       0/1:81:21       0/1:100:84
+5      8690190 rs10040042      A       G       .       PASS    AA=A;DP=107     GT:GQ:DP        0/1:81:20       0/1:92:19       0/1:100:56
+6      162285891       rs1790022       C       T       .       PASS    AA=T;DP=100     GT:GQ:DP        0/1:81:21       0/1:100:20      0/1:100:58
+2      42815511        rs4953614       C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        0/1:81:23       0/1:100:30      0/1:100:66
+7      15837882        rs17169090      A       G       .       PASS    AA=A;DP=118     GT:GQ:DP        0/1:81:23       0/1:100:33      0/1:100:64
+8      3693937 rs2954220       A       G       .       PASS    AA=G;DP=120     GT:GQ:DP        0/1:81:23       0/1:83:18       0/1:100:79
+8      5825382 rs2700768       C       G       .       PASS    AA=G;DP=132     GT:GQ:DP        0/1:81:24       0/1:100:25      0/1:100:84
+15     55690970        .       C       G       .       PASS    AA=C;DP=108     GT:GQ:DP        0/1:81:25       0/1:100:29      0/1:100:56
+8      142864177       rs10086775      A       T       .       PASS    AA=A;DP=100     GT:GQ:DP        0/1:81:26       0/1:59:21       0/1:100:53
+9      135391427       rs11507717      A       C       .       PASS    AA=C;DP=161     GT:GQ:DP        0/1:81:34       0/1:100:20      0/1:100:73
+22     41071737        rs2071773       A       C       .       PASS    AA=C;DP=109     GT:GQ:DP        0/1:81:34       0/1:35:20       0/1:100:55
+5      171924024       rs7734791       A       G       .       PASS    AA=G;DP=140     GT:GQ:DP        0/1:81:37       0/1:50:23       0/1:100:82
+6      102590597       rs2518146       A       C       .       PASS    AA=C;DP=78      GT:GQ:DP        0/1:82:10       0/1:55:21       0/1:100:46
+5      109590173       rs4129562       A       G       .       PASS    AA=A;DP=95      GT:GQ:DP        0/1:82:17       0/1:100:28      0/1:100:48
+19     33922831        rs7246445       G       T       .       PASS    AA=g;DP=67      GT:GQ:DP        0/1:82:17       0/1:81:17       0/1:100:26
+12     2938148 rs10431352      C       T       .       PASS    AA=C;DP=91      GT:GQ:DP        0/1:82:18       0/1:63:19       0/1:100:54
+3      25435113        .       A       G       .       PASS    AA=A;DP=93      GT:GQ:DP        0/1:82:20       0/1:12:18       0/1:100:52
+1      241231673       .       A       T       .       PASS    AA=a;DP=98      GT:GQ:DP        0/1:82:23       0/1:32:15       0/1:100:60
+3      66011829        rs62243847      C       T       .       PASS    AA=C;DP=98      GT:GQ:DP        0/1:82:24       0/1:61:16       0/1:100:58
+18     11136399        rs9951453       C       T       .       PASS    AA=C;DP=87      GT:GQ:DP        0/1:82:24       0/1:65:13       0/1:100:38
+13     66491667        rs9540972       C       T       .       PASS    AA=C;DP=142     GT:GQ:DP        0/1:82:27       0/1:100:24      0/1:100:84
+5      82048909        .       A       G       .       PASS    AA=A;DP=117     GT:GQ:DP        0/1:82:29       0/1:46:17       0/1:100:55
+15     66415197        rs2306023       C       T       .       PASS    AA=C;DP=106     GT:GQ:DP        0/1:82:33       0/1:53:10       0/1:100:65
+19     55911148        rs11882350      C       G       .       PASS    AA=C;DP=110     GT:GQ:DP        0/1:82:33       0/1:80:20       0/1:100:54
+8      62072802        rs28480198      A       T       .       PASS    AA=T;DP=76      GT:GQ:DP        0/1:83:16       0/1:23:14       0/1:100:36
+5      174013503       rs978761        C       T       .       PASS    AA=C;DP=66      GT:GQ:DP        0/1:83:17       0/1:10:8        0/1:100:33
+1      30839903        rs6683270       C       T       .       PASS    AA=C;DP=78      GT:GQ:DP        0/1:83:17       0/1:51:10       0/1:100:38
+11     27567605        rs4922788       A       G       .       PASS    AA=N;DP=97      GT:GQ:DP        0/1:83:20       0/1:100:25      0/1:100:51
+4      140393670       rs7690134       C       T       .       PASS    AA=C;DP=80      GT:GQ:DP        0/1:83:21       0/1:55:10       0/1:100:49
+21     25452469        rs2829580       C       T       .       PASS    AA=C;DP=102     GT:GQ:DP        0/1:83:23       0/1:100:24      0/1:100:55
+X      49859262        .       C       T       .       PASS    AA=.;DP=159     GT:GQ:DP        0/1:83:23       0/1:73:33       0/1:100:55
+6      1941657 rs9503063       C       T       .       PASS    AA=C;DP=121     GT:GQ:DP        0/1:83:24       0/1:51:21       0/1:100:78
+15     98451248        rs62043234      C       T       .       PASS    AA=C;DP=100     GT:GQ:DP        0/1:83:27       0/1:32:17       0/1:100:45
+18     54108649        .       A       C       .       PASS    AA=A;DP=91      GT:GQ:DP        0/1:83:27       0/1:43:10       0/1:86:51
+9      82132671        rs10867500      A       G       .       PASS    AA=A;DP=106     GT:GQ:DP        0/1:83:29       0/1:100:21      0/1:100:57
+9      72227783        rs12000252      A       G       .       PASS    AA=A;DP=131     GT:GQ:DP        0/1:83:32       0/1:49:22       0/1:100:79
+11     62009416        .       G       T       .       PASS    AA=-;DP=151     GT:GQ:DP        0/1:83:45       0/1:86:25       0/1:34:82
+4      183202157       rs7693462       A       G       .       PASS    AA=A;DP=88      GT:GQ:DP        0/1:84:16       0/1:100:21      0/1:100:34
+3      65743085        rs6774020       A       G       .       PASS    AA=G;DP=113     GT:GQ:DP        0/1:84:17       0/1:100:23      0/1:100:75
+10     54719545        rs10824986      C       T       .       PASS    AA=-;DP=89      GT:GQ:DP        0/1:84:17       0/1:68:22       0/1:100:49
+8      4779889 rs58680078      C       T       .       PASS    AA=C;DP=95      GT:GQ:DP        0/1:84:19       0/1:71:17       0/1:100:61
+4      12224810        .       A       G       .       PASS    AA=G;DP=96      GT:GQ:DP        0/1:84:19       0/1:86:21       0/1:100:55
+1      80048738        rs1935388       A       G       .       PASS    AA=G;DP=104;HM2 GT:GQ:DP        0/1:84:21       0/1:100:17      0/1:100:66
+4      44927061        rs348546        A       G       .       PASS    AA=A;DP=128     GT:GQ:DP        0/1:84:22       0/1:100:34      0/1:100:71
+2      231147587       .       C       T       .       PASS    AA=C;DP=90      GT:GQ:DP        0/1:84:24       0/1:42:11       0/1:100:55
+2      214288405       rs2078429       A       G       .       PASS    AA=G;DP=115     GT:GQ:DP        0/1:84:25       0/1:100:24      0/1:100:67
+15     62017905        rs1563886       C       G       .       PASS    AA=C;DP=100     GT:GQ:DP        0/1:84:26       0/1:51:18       0/1:100:55
+18     39861976        rs9961860       C       T       .       PASS    AA=C;DP=108     GT:GQ:DP        0/1:84:26       0/1:95:22       0/1:100:60
+7      3566366 rs10257937      C       G       .       PASS    AA=C;DP=116     GT:GQ:DP        0/1:84:29       0/1:86:29       0/1:100:55
+6      103116315       rs4546499       G       T       .       PASS    AA=t;DP=114     GT:GQ:DP        0/1:84:30       0/1:26:13       0/1:100:68
+13     29364519        rs7987218       A       G       .       PASS    AA=G;DP=109     GT:GQ:DP        0/1:84:31       0/1:55:22       0/1:100:54
+5      172301177       .       A       C       .       PASS    AA=A;DP=112     GT:GQ:DP        0/1:84:34       0/1:100:21      0/1:100:57
+4      143498776       rs9308149       A       C       .       PASS    AA=A;DP=68      GT:GQ:DP        0/1:85:17       0/1:57:11       0/1:100:41
+2      146707361       rs16826151      A       G       .       PASS    AA=A;DP=103     GT:GQ:DP        0/1:85:18       0/1:97:27       0/1:100:60
+4      90636223        rs10025166      C       T       .       PASS    AA=T;DP=112     GT:GQ:DP        0/1:85:19       0/1:100:30      0/1:100:65
+2      153691694       .       C       T       .       PASS    AA=c;DP=86      GT:GQ:DP        0/1:85:20       0/1:41:14       0/1:100:41
+13     110464160       rs9522075       C       T       .       PASS    AA=T;DP=99      GT:GQ:DP        0/1:85:20       0/1:85:16       0/1:100:64
+15     37004287        rs9972315       A       G       .       PASS    AA=A;DP=122     GT:GQ:DP        0/1:85:21       0/1:44:22       0/1:100:80
+3      167415481       rs10513624      A       T       .       PASS    AA=.;DP=97      GT:GQ:DP        0/1:85:21       0/1:81:18       0/1:100:60
+4      21010870        rs10014861      C       G       .       PASS    AA=G;DP=135     GT:GQ:DP        0/1:85:27       0/1:100:27      0/1:100:38
+X      213430  .       C       T       .       PASS    AA=c;DP=80      GT:GQ:DP        0/1:85:28       0/1:32:7        0/1:100:37
+21     40661862        rs2837583       C       T       .       PASS    AA=C;DP=131     GT:GQ:DP        0/1:85:28       0/1:91:29       0/1:100:75
+11     5525872 rs445728        A       G       .       PASS    AA=G;DP=131     GT:GQ:DP        0/1:85:31       0/1:100:33      0/1:100:67
+2      38142293        rs2551196       C       T       .       PASS    AA=C;DP=135     GT:GQ:DP        0/1:85:31       0/1:13:27       0/1:100:78
+4      59870861        rs9993914       A       T       .       PASS    AA=T;DP=106     GT:GQ:DP        0/1:86:16       0/1:100:24      0/1:100:67
+15     92218309        rs7162450       A       G       .       PASS    AA=G;DP=87      GT:GQ:DP        0/1:86:16       0/1:87:21       0/1:100:49
+13     62062378        rs2649181       C       T       .       PASS    AA=C;DP=96      GT:GQ:DP        0/1:86:18       0/1:100:21      0/1:100:58
+2      214603106       rs1072570       C       T       .       PASS    AA=C;DP=97      GT:GQ:DP        0/1:86:18       0/1:64:13       0/1:100:63
+18     31374719        rs355300        C       T       .       PASS    AA=C;DP=86      GT:GQ:DP        0/1:86:20       0/1:100:25      0/1:100:32
+1      230429663       rs9729080       C       T       .       PASS    AA=C;DP=112;HM2;HM3     GT:GQ:DP        0/1:86:22       0/1:75:18       0/1:100:74
+2      184062301       rs35648437      C       T       .       PASS    AA=T;DP=103     GT:GQ:DP        0/1:86:23       0/1:100:18      0/1:100:62
+21     39863144        rs59155174      A       G       .       PASS    AA=A;DP=94      GT:GQ:DP        0/1:86:23       0/1:61:19       0/1:100:51
+4      169937665       rs9991075       A       G       .       PASS    AA=G;DP=98      GT:GQ:DP        0/1:86:23       0/1:83:22       0/1:100:52
+6      14846509        rs2472791       A       G       .       PASS    AA=A;DP=106     GT:GQ:DP        0/1:86:26       0/1:100:21      0/1:100:61
+6      43859053        rs3025033       A       G       .       PASS    AA=A;DP=103     GT:GQ:DP        0/1:86:26       0/1:44:25       0/1:100:52
+10     129366515       rs7912681       C       T       .       PASS    AA=T;DP=111     GT:GQ:DP        0/1:86:26       0/1:57:25       0/1:100:62
+14     30070221        rs2198639       C       T       .       PASS    AA=C;DP=114     GT:GQ:DP        0/1:86:26       0/1:71:16       0/1:100:75
+22     40726972        rs9623489       A       G       .       PASS    AA=A;DP=135     GT:GQ:DP        0/1:86:33       0/1:100:29      0/1:100:74
+10     1956351 rs12769078      A       G       .       PASS    AA=.;DP=142     GT:GQ:DP        0/1:86:35       0/1:64:23       0/1:100:80
+6      93922568        rs9445082       C       T       .       PASS    AA=C;DP=158     GT:GQ:DP        0/1:86:36       0/1:54:19       0/1:100:49
+9      15680496        rs10121393      G       T       .       PASS    AA=G;DP=77      GT:GQ:DP        0/1:87:14       0/1:76:21       0/1:100:34
+1      73669969        rs6669843       A       G       .       PASS    AA=A;DP=95;HM2  GT:GQ:DP        0/1:87:15       0/1:65:24       0/1:100:53
+11     86519617        rs595930        C       T       .       PASS    AA=c;DP=114     GT:GQ:DP        0/1:87:15       0/1:68:27       0/1:100:69
+6      48620994        rs9463425       A       G       .       PASS    AA=G;DP=116     GT:GQ:DP        0/1:87:16       0/1:100:25      0/1:100:73
+5      157679422       rs4704924       C       T       .       PASS    AA=C;DP=122     GT:GQ:DP        0/1:87:17       0/1:21:16       0/1:100:80
+18     27080489        .       G       T       .       PASS    AA=G;DP=98      GT:GQ:DP        0/1:87:18       0/1:100:18      0/1:100:65
+8      105179970       rs10104024      A       T       .       PASS    AA=A;DP=111     GT:GQ:DP        0/1:87:21       0/1:100:22      0/1:100:65
+12     32743100        rs60657886      C       T       .       PASS    AA=C;DP=95      GT:GQ:DP        0/1:87:21       0/1:57:18       0/1:100:56
+13     31346488        rs633180        G       T       .       PASS    AA=G;DP=84      GT:GQ:DP        0/1:87:22       0/1:21:14       0/1:100:37
+8      36519606        rs59625671      C       G       .       PASS    AA=G;DP=134     GT:GQ:DP        0/1:87:26       0/1:100:20      0/1:100:84
+22     21574310        rs364790        A       G       .       PASS    AA=N;DP=147     GT:GQ:DP        0/1:87:26       0/1:100:51      0/1:100:31
+1      219926806       rs10863648      C       T       .       PASS    AA=T;DP=114;HM2;HM3     GT:GQ:DP        0/1:87:26       0/1:88:21       0/1:100:66
+2      182822470       rs964757        A       G       .       PASS    AA=G;DP=119     GT:GQ:DP        0/1:87:27       0/1:100:25      0/1:100:67
+6      66932742        rs7771991       C       G       .       PASS    AA=C;DP=114     GT:GQ:DP        0/1:87:30       0/1:33:14       0/1:100:71
+5      163513398       rs11135303      A       G       .       PASS    AA=G;DP=153     GT:GQ:DP        0/1:87:33       0/1:70:31       0/1:100:80
+2      82869098        rs12052427      G       T       .       PASS    AA=T;DP=94      GT:GQ:DP        0/1:88:16       0/1:37:14       0/1:100:51
+2      177020677       rs1318763       A       G       .       PASS    AA=G;DP=82      GT:GQ:DP        0/1:88:16       0/1:83:19       0/1:100:35
+22     20764566        rs5750484       C       T       .       PASS    AA=c;DP=108     GT:GQ:DP        0/1:88:16       0/1:84:25       0/1:100:67
+14     106235877       .       A       G       .       PASS    AA=.;DP=76      GT:GQ:DP        0/1:88:17       0/1:14:10       0/1:100:34
+3      1792383 rs6442686       C       G       .       PASS    AA=N;DP=91      GT:GQ:DP        0/1:88:17       0/1:94:24       0/1:100:50
+2      80686376        rs3770350       C       T       .       PASS    AA=C;DP=83      GT:GQ:DP        0/1:88:18       0/1:100:23      0/1:100:44
+6      103879877       rs2213845       A       G       .       PASS    AA=N;DP=78      GT:GQ:DP        0/1:88:18       0/1:59:18       0/1:100:42
+12     79418971        rs7976516       C       T       .       PASS    AA=T;DP=106     GT:GQ:DP        0/1:88:18       0/1:88:23       0/1:100:66
+5      103098411       rs17155765      C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        0/1:88:20       0/1:100:26      0/1:100:76
+13     29174371        rs2768779       C       G       .       PASS    AA=c;DP=101     GT:GQ:DP        0/1:88:24       0/1:30:18       0/1:100:61
+4      25565124        rs28469550      C       T       .       PASS    AA=C;DP=126     GT:GQ:DP        0/1:88:29       0/1:48:20       0/1:100:77
+15     55721517        .       A       T       .       PASS    AA=A;DP=133     GT:GQ:DP        0/1:88:30       0/1:100:33      0/1:100:70
+2      154943390       rs6760854       C       T       .       PASS    AA=T;DP=107     GT:GQ:DP        0/1:88:30       0/1:41:19       0/1:100:58
+3      4597431 rs13083200      A       G       .       PASS    AA=G;DP=137     GT:GQ:DP        0/1:88:31       0/1:100:29      0/1:100:76
+15     58226691        rs7166328       C       T       .       PASS    AA=T;DP=118     GT:GQ:DP        0/1:88:31       0/1:96:22       0/1:100:69
+9      24869511        .       A       G       .       PASS    AA=A;DP=73      GT:GQ:DP        0/1:89:14       0/1:92:13       0/1:100:44
+2      52657798        rs13398780      G       T       .       PASS    AA=T;DP=102     GT:GQ:DP        0/1:89:16       0/1:100:24      0/1:100:67
+8      4839195 rs3860871       C       G       .       PASS    AA=C;DP=77      GT:GQ:DP        0/1:89:18       0/1:15:4        0/1:100:52
+4      181182372       rs4861827       A       G       .       PASS    AA=A;DP=86      GT:GQ:DP        0/1:89:19       0/1:41:17       0/1:100:51
+9      23781729        rs783563        G       T       .       PASS    AA=G;DP=117     GT:GQ:DP        0/1:89:21       0/1:100:24      0/1:100:68
+21     24635352        rs9976632       A       G       .       PASS    AA=G;DP=109     GT:GQ:DP        0/1:89:26       0/1:41:16       0/1:100:68
+2      120774882       rs2028147       A       G       .       PASS    AA=G;DP=125     GT:GQ:DP        0/1:89:31       0/1:83:16       0/1:100:81
+9      15576534        rs10810402      C       T       .       PASS    AA=C;DP=144     GT:GQ:DP        0/1:89:33       0/1:100:25      0/1:100:40
+4      3545971 .       C       T       .       PASS    AA=C;DP=182     GT:GQ:DP        0/1:89:33       0/1:48:28       0/1:100:57
+12     39194161        .       C       T       .       PASS    AA=C;DP=185     GT:GQ:DP        0/1:89:46       0/1:23:32       0/1:100:40
+1      108869491       .       A       T       .       PASS    AA=a;DP=84      GT:GQ:DP        0/1:90:13       0/1:77:16       0/1:100:55
+10     22317373        rs4748776       C       T       .       PASS    AA=T;DP=81      GT:GQ:DP        0/1:90:16       0/1:13:13       0/1:100:36
+19     33764686        rs57333371      C       T       .       PASS    AA=C;DP=77      GT:GQ:DP        0/1:90:18       0/1:12:9        0/1:100:50
+4      95054470        rs2618730       C       T       .       PASS    AA=C;DP=112     GT:GQ:DP        0/1:90:19       0/1:100:32      0/1:100:62
+1      171340237       rs6425205       C       T       .       PASS    AA=C;DP=100     GT:GQ:DP        0/1:90:21       0/1:100:18      0/1:100:64
+21     19500437        rs8126713       A       C       .       PASS    AA=N;DP=92      GT:GQ:DP        0/1:90:22       0/1:81:23       0/1:100:33
+15     94511552        .       A       G       .       PASS    AA=G;DP=83      GT:GQ:DP        0/1:90:24       0/1:100:21      0/1:100:39
+12     70109673        rs4760935       C       T       .       PASS    AA=T;DP=117     GT:GQ:DP        0/1:90:24       0/1:100:27      0/1:100:66
+3      128568  rs7627460       A       G       .       PASS    AA=A;DP=111     GT:GQ:DP        0/1:90:24       0/1:77:24       0/1:100:63
+9      88430459        rs7869239       A       G       .       PASS    AA=A;DP=108     GT:GQ:DP        0/1:90:26       0/1:48:19       0/1:96:22
+21     46704368        .       C       G       .       PASS    AA=C;DP=90      GT:GQ:DP        0/1:90:26       0/1:65:19       0/1:73:33
+4      140805397       rs795600        C       T       .       PASS    AA=T;DP=89      GT:GQ:DP        0/1:90:27       0/1:4:16        0/1:100:35
+22     47145488        rs4823758       A       C       .       PASS    AA=C;DP=114     GT:GQ:DP        0/1:90:31       0/1:79:17       0/1:100:66
+4      102965008       rs1125271       C       T       .       PASS    AA=C;DP=67      GT:GQ:DP        0/1:91:14       0/1:100:19      0/1:100:35
+1      156933495       rs12062927      C       T       .       PASS    AA=C;DP=93;HM2  GT:GQ:DP        0/1:91:15       0/1:85:12       0/1:100:67
+1      45642140        rs59796793      C       T       .       PASS    AA=C;DP=75      GT:GQ:DP        0/1:91:18       0/1:36:11       0/1:100:33
+10     35919364        rs6481963       C       T       .       PASS    AA=C;DP=102     GT:GQ:DP        0/1:91:18       0/1:85:16       0/1:100:60
+X      1551207 rs4589043       A       G       .       PASS    AA=N;DP=77      GT:GQ:DP        0/1:91:19       0/1:96:19       0/1:100:34
+5      84945936        .       C       G       .       PASS    AA=C;DP=104     GT:GQ:DP        0/1:91:20       0/1:100:30      0/1:100:42
+14     26156521        rs1955820       A       G       .       PASS    AA=G;DP=111     GT:GQ:DP        0/1:91:20       0/1:74:23       0/1:100:69
+18     38435144        rs58744653      A       C       .       PASS    AA=A;DP=88      GT:GQ:DP        0/1:91:22       0/1:45:22       0/1:100:43
+9      75516400        rs7037278       C       T       .       PASS    AA=T;DP=113     GT:GQ:DP        0/1:91:23       0/1:62:28       0/1:100:63
+10     130428304       rs6482708       A       G       .       PASS    AA=A;DP=106     GT:GQ:DP        0/1:91:25       0/1:77:24       0/1:100:56
+7      67323901        rs12698674      C       T       .       PASS    AA=t;DP=104     GT:GQ:DP        0/1:91:25       0/1:79:20       0/1:100:59
+8      41261109        rs55821344      A       G       .       PASS    AA=G;DP=105     GT:GQ:DP        0/1:91:29       0/1:65:17       0/1:100:47
+18     29510365        rs10502623      C       G       .       PASS    AA=C;DP=113     GT:GQ:DP        0/1:91:30       0/1:100:24      0/1:100:58
+4      86551438        rs427209        C       G       .       PASS    AA=c;DP=118     GT:GQ:DP        0/1:91:32       0/1:52:32       0/1:100:53
+17     76340789        rs4401092       A       G       .       PASS    AA=G;DP=107     GT:GQ:DP        0/1:91:36       0/1:17:17       0/1:100:44
+3      99604079        rs4600851       A       G       .       PASS    AA=A;DP=142     GT:GQ:DP        0/1:91:39       0/1:45:16       0/1:100:87
+7      8890967 rs6945904       A       G       .       PASS    AA=G;DP=94      GT:GQ:DP        0/1:92:10       0/1:100:18      0/1:100:60
+2      130038139       rs3109289       A       G       .       PASS    AA=G;DP=75      GT:GQ:DP        0/1:92:15       0/1:39:21       0/1:100:38
+5      173413112       .       C       T       .       PASS    AA=C;DP=98      GT:GQ:DP        0/1:92:15       0/1:89:16       0/1:100:67
+3      111423266       rs56332404      A       G       .       PASS    AA=A;DP=59      GT:GQ:DP        0/1:92:16       0/1:62:13       0/1:100:20
+3      176100287       rs55665411      C       T       .       PASS    AA=N;DP=97      GT:GQ:DP        0/1:92:19       0/1:79:15       0/1:100:63
+2      102343628       rs6543123       C       T       .       PASS    AA=t;DP=94      GT:GQ:DP        0/1:92:19       0/1:89:21       0/1:100:51
+19     9466853 rs10423567      C       G       .       PASS    AA=G;DP=84      GT:GQ:DP        0/1:92:19       0/1:97:21       0/1:100:45
+6      118454913       .       C       G       .       PASS    AA=G;DP=115     GT:GQ:DP        0/1:92:20       0/1:100:24      0/1:100:75
+13     100368236       rs9585548       A       G       .       PASS    AA=G;DP=89      GT:GQ:DP        0/1:92:23       0/1:78:20       0/1:100:47
+4      180861045       rs4861798       A       G       .       PASS    AA=a;DP=80      GT:GQ:DP        0/1:92:24       0/1:100:21      0/1:96:25
+12     45545595        rs2408634       A       G       .       PASS    AA=G;DP=125     GT:GQ:DP        0/1:92:32       0/1:61:31       0/1:100:53
+15     76309361        rs6495285       A       G       .       PASS    AA=A;DP=134     GT:GQ:DP        0/1:92:38       0/1:26:19       0/1:100:79
+5      29752041        .       G       T       .       PASS    AA=G;DP=68      GT:GQ:DP        0/1:93:15       0/1:70:15       0/1:100:36
+16     23723269        rs9929466       A       G       .       PASS    AA=A;DP=74      GT:GQ:DP        0/1:93:16       0/1:80:18       0/1:100:40
+10     114594912       rs11196129      C       T       .       PASS    AA=C;DP=90      GT:GQ:DP        0/1:93:17       0/1:54:16       0/1:100:53
+3      71314268        rs9844174       G       T       .       PASS    AA=T;DP=77      GT:GQ:DP        0/1:93:18       0/1:65:15       0/1:100:35
+1      180564943       rs9425530       A       G       .       PASS    AA=A;DP=72;HM2  GT:GQ:DP        0/1:93:19       0/1:41:9        0/1:100:45
+19     60133807        rs269951        A       G       .       PASS    AA=a;DP=110     GT:GQ:DP        0/1:93:20       0/1:92:22       0/1:100:67
+20     58582708        rs697706        A       G       .       PASS    AA=A;DP=106     GT:GQ:DP        0/1:93:22       0/1:67:18       0/1:100:67
+4      76940729        rs2271472       C       G       .       PASS    AA=C;DP=98      GT:GQ:DP        0/1:93:25       0/1:100:19      0/1:100:54
+4      91936203        rs2100450       C       T       .       PASS    AA=C;DP=129     GT:GQ:DP        0/1:93:25       0/1:100:26      0/1:100:70
+9      98481213        .       G       T       .       PASS    AA=g;DP=96      GT:GQ:DP        0/1:93:25       0/1:62:17       0/1:100:54
+8      105643454       rs62510142      C       T       .       PASS    AA=C;DP=133     GT:GQ:DP        0/1:93:26       0/1:83:25       0/1:100:38
+10     53208538        .       A       G       .       PASS    AA=G;DP=114     GT:GQ:DP        0/1:93:26       0/1:93:17       0/1:100:29
+4      63944257        rs28531771      C       T       .       PASS    AA=C;DP=126     GT:GQ:DP        0/1:93:27       0/1:100:23      0/1:100:76
+14     27631624        rs1952847       G       T       .       PASS    AA=G;DP=113     GT:GQ:DP        0/1:93:27       0/1:100:26      0/1:100:61
+4      128410761       .       C       T       .       PASS    AA=T;DP=113     GT:GQ:DP        0/1:93:30       0/1:100:20      0/1:100:62
+18     10490362        rs525254        C       T       .       PASS    AA=T;DP=119     GT:GQ:DP        0/1:93:31       0/1:100:21      0/1:100:66
+16     1340694 rs2294605       C       T       .       PASS    AA=T;DP=127     GT:GQ:DP        0/1:93:32       0/1:55:12       0/1:100:85
+7      22001794        rs1730909       C       G       .       PASS    AA=G;DP=107     GT:GQ:DP        0/1:93:32       0/1:65:20       0/1:100:57
+9      134594912       rs1887960       C       G       .       PASS    AA=C;DP=133     GT:GQ:DP        0/1:93:39       0/1:89:26       0/1:100:70
+6      67612031        .       A       G       .       PASS    AA=A;DP=72      GT:GQ:DP        0/1:94:13       0/1:71:12       0/1:100:47
+16     63259802        rs28373357      C       G       .       PASS    AA=G;DP=87      GT:GQ:DP        0/1:94:14       0/1:100:18      0/1:100:42
+10     58684194        rs1717540       A       G       .       PASS    AA=G;DP=86      GT:GQ:DP        0/1:94:15       0/1:100:22      0/1:100:49
+4      113089585       rs9307376       C       T       .       PASS    AA=C;DP=104     GT:GQ:DP        0/1:94:15       0/1:100:29      0/1:100:55
+9      82915124        rs10123182      G       T       .       PASS    AA=G;DP=81      GT:GQ:DP        0/1:94:16       0/1:65:18       0/1:100:48
+13     86057705        rs9560428       A       G       .       PASS    AA=A;DP=80      GT:GQ:DP        0/1:94:17       0/1:20:15       0/1:100:48
+12     39544520        rs2405509       C       G       .       PASS    AA=C;DP=92      GT:GQ:DP        0/1:94:17       0/1:89:19       0/1:100:56
+2      117508574       rs59946696      A       T       .       PASS    AA=A;DP=117     GT:GQ:DP        0/1:94:20       0/1:100:30      0/1:100:62
+8      133182142       rs2469495       C       T       .       PASS    AA=T;DP=101     GT:GQ:DP        0/1:94:20       0/1:64:15       0/1:100:67
+9      16999876        rs263654        A       T       .       PASS    AA=a;DP=72      GT:GQ:DP        0/1:94:21       0/1:62:13       0/1:100:25
+4      23233910        rs55656936      A       C       .       PASS    AA=A;DP=128     GT:GQ:DP        0/1:94:24       0/1:100:33      0/1:100:30
+3      14442892        .       G       T       .       PASS    AA=G;DP=115     GT:GQ:DP        0/1:94:24       0/1:26:12       0/1:100:74
+10     52462200        rs10822139      A       G       .       PASS    AA=A;DP=110     GT:GQ:DP        0/1:94:24       0/1:42:12       0/1:100:75
+9      120251862       rs1891447       C       T       .       PASS    AA=T;DP=111     GT:GQ:DP        0/1:94:24       0/1:88:17       0/1:100:73
+9      13845745        rs9406469       C       T       .       PASS    AA=T;DP=118     GT:GQ:DP        0/1:94:25       0/1:55:20       0/1:100:74
+4      112955817       rs326869        A       G       .       PASS    AA=G;DP=111     GT:GQ:DP        0/1:94:25       0/1:98:28       0/1:100:58
+11     78998896        rs4944234       G       T       .       PASS    AA=T;DP=153     GT:GQ:DP        0/1:94:26       0/1:100:33      0/1:100:92
+1      80435985        rs9633298       A       C       .       PASS    AA=C;DP=121;HM2;HM3     GT:GQ:DP        0/1:94:27       0/1:52:29       0/1:100:65
+10     21231785        rs7906855       A       C       .       PASS    AA=A;DP=125     GT:GQ:DP        0/1:94:28       0/1:43:24       0/1:100:74
+15     43514760        rs2467879       A       G       .       PASS    AA=A;DP=111     GT:GQ:DP        0/1:94:30       0/1:100:29      0/1:100:53
+11     62970026        rs7127167       A       G       .       PASS    AA=A;DP=141     GT:GQ:DP        0/1:94:31       0/1:78:24       0/1:100:84
+22     25817797        rs7288957       A       G       .       PASS    AA=a;DP=126     GT:GQ:DP        0/1:94:31       0/1:89:25       0/1:100:70
+7      67268310        .       A       C       .       PASS    AA=A;DP=122     GT:GQ:DP        0/1:94:32       0/1:72:30       0/1:34:61
+4      78477469        rs28827589      A       G       .       PASS    AA=N;DP=119     GT:GQ:DP        0/1:94:33       0/1:29:13       0/1:100:73
+2      43929748        .       C       G       .       PASS    AA=C;DP=114     GT:GQ:DP        0/1:94:34       0/1:21:10       0/1:100:69
+18     34031493        rs11082053      G       T       .       PASS    AA=T;DP=99      GT:GQ:DP        0/1:95:14       0/1:100:25      0/1:100:60
+8      15737968        rs61106600      C       T       .       PASS    AA=T;DP=89      GT:GQ:DP        0/1:95:17       0/1:61:15       0/1:100:59
+7      122036701       rs12706423      C       T       .       PASS    AA=T;DP=109     GT:GQ:DP        0/1:95:19       0/1:100:21      0/1:100:69
+6      6551201 rs4959392       A       T       .       PASS    AA=A;DP=86      GT:GQ:DP        0/1:95:20       0/1:12:11       0/1:100:45
+15     82153685        .       C       T       .       PASS    AA=C;DP=114     GT:GQ:DP        0/1:95:21       0/1:100:26      0/1:100:68
+11     8410170 rs2121312       C       T       .       PASS    AA=T;DP=117     GT:GQ:DP        0/1:95:24       0/1:44:18       0/1:100:71
+15     90101352        .       C       T       .       PASS    AA=C;DP=87      GT:GQ:DP        0/1:95:24       0/1:48:14       0/1:100:53
+8      118140700       rs17745203      C       T       .       PASS    AA=C;DP=106     GT:GQ:DP        0/1:95:25       0/1:88:24       0/1:100:57
+20     31266871        rs55709958      A       G       .       PASS    AA=A;DP=125     GT:GQ:DP        0/1:95:29       0/1:66:23       0/1:100:75
+6      32688563        rs9271262       A       G       .       PASS    AA=A;DP=135     GT:GQ:DP        0/1:95:30       0/1:100:32      0/1:100:58
+1      107876192       rs521420        C       G       .       PASS    AA=C;DP=119;HM2;HM3     GT:GQ:DP        0/1:95:31       0/1:89:19       0/1:100:70
+7      33192212        rs11979709      A       C       .       PASS    AA=A;DP=109     GT:GQ:DP        0/1:95:33       0/1:100:21      0/1:100:55
+16     15841668        rs8045271       A       G       .       PASS    AA=A;DP=125     GT:GQ:DP        0/1:95:35       0/1:33:20       0/1:100:72
+6      66607772        rs9345694       A       T       .       PASS    AA=A;DP=72      GT:GQ:DP        0/1:96:12       0/1:81:16       0/1:100:44
+10     85409335        rs6585483       A       G       .       PASS    AA=A;DP=104     GT:GQ:DP        0/1:96:16       0/1:100:22      0/1:100:68
+6      166444407       rs3099301       A       G       .       PASS    AA=G;DP=101     GT:GQ:DP        0/1:96:18       0/1:100:24      0/1:100:59
+4      22841924        rs6843147       C       T       .       PASS    AA=C;DP=116     GT:GQ:DP        0/1:96:19       0/1:100:26      0/1:100:75
+2      152101542       rs6744470       C       T       .       PASS    AA=C;DP=118     GT:GQ:DP        0/1:96:22       0/1:100:22      0/1:100:74
+13     103055070       rs7991245       C       T       .       PASS    AA=T;DP=101     GT:GQ:DP        0/1:96:24       0/1:52:21       0/1:100:55
+7      66570817        rs4632948       A       G       .       PASS    AA=a;DP=120     GT:GQ:DP        0/1:96:25       0/1:75:14       0/1:100:81
+5      3181169 rs467856        C       T       .       PASS    AA=T;DP=116     GT:GQ:DP        0/1:96:26       0/1:100:25      0/1:100:66
+6      29921661        rs3873260       A       G       .       PASS    AA=.;DP=99      GT:GQ:DP        0/1:96:26       0/1:39:16       0/1:100:57
+14     30150299        .       A       C       .       PASS    AA=A;DP=105     GT:GQ:DP        0/1:96:26       0/1:51:16       0/1:100:59
+2      122091029       rs7594288       C       T       .       PASS    AA=T;DP=135     GT:GQ:DP        0/1:96:28       0/1:100:31      0/1:100:79
+1      159937432       rs11806673      A       C       .       PASS    AA=A;DP=101     GT:GQ:DP        0/1:96:30       0/1:22:17       0/1:100:44
+4      93116647        rs7672071       G       T       .       PASS    AA=G;DP=114     GT:GQ:DP        0/1:96:30       0/1:99:23       0/1:100:61
+12     66879896        rs6581798       A       C       .       PASS    AA=A;DP=121     GT:GQ:DP        0/1:96:31       0/1:100:21      0/1:100:70
+11     86541925        rs566046        A       G       .       PASS    AA=A;DP=139     GT:GQ:DP        0/1:96:35       0/1:100:30      0/1:100:73
+4      136344318       rs11944469      C       G       .       PASS    AA=G;DP=100     GT:GQ:DP        0/1:97:14       0/1:100:26      0/1:100:60
+5      23794307        rs1520983       A       T       .       PASS    AA=T;DP=65      GT:GQ:DP        0/1:97:15       0/1:96:21       0/1:100:20
+17     47629169        rs17609255      C       T       .       PASS    AA=C;DP=85      GT:GQ:DP        0/1:97:16       0/1:91:12       0/1:100:54
+4      183709576       rs4428328       A       G       .       PASS    AA=A;DP=97      GT:GQ:DP        0/1:97:17       0/1:100:20      0/1:100:61
+9      23370998        rs7025847       A       T       .       PASS    AA=T;DP=103     GT:GQ:DP        0/1:97:17       0/1:40:20       0/1:100:67
+10     3011935 rs12784956      A       G       .       PASS    AA=G;DP=143     GT:GQ:DP        0/1:97:22       0/1:80:19       0/1:100:100
+1      155880882       rs2758626       A       G       .       PASS    AA=A;DP=139     GT:GQ:DP        0/1:97:26       0/1:73:25       0/1:100:79
+4      20108513        rs571367        A       T       .       PASS    AA=A;DP=101     GT:GQ:DP        0/1:97:27       0/1:92:19       0/1:100:52
+14     94650204        .       C       T       .       PASS    AA=t;DP=119     GT:GQ:DP        0/1:97:28       0/1:85:21       0/1:100:71
+4      10141348        rs2286462       A       C       .       PASS    AA=A;DP=117     GT:GQ:DP        0/1:97:28       0/1:99:22       0/1:100:67
+4      16429132        .       A       G       .       PASS    AA=A;DP=134     GT:GQ:DP        0/1:97:29       0/1:80:19       0/1:100:86
+3      55242263        rs401140        C       G       .       PASS    AA=G;DP=142     GT:GQ:DP        0/1:97:31       0/1:100:26      0/1:100:85
+4      4367637 rs2980181       C       T       .       PASS    AA=T;DP=143     GT:GQ:DP        0/1:97:33       0/1:100:27      0/1:100:87
+3      155911449       rs55907037      A       G       .       PASS    AA=G;DP=130     GT:GQ:DP        0/1:97:34       0/1:100:24      0/1:100:71
+1      42675453        rs10890196      A       G       .       PASS    AA=A;DP=164;HM2;HM3     GT:GQ:DP        0/1:97:35       0/1:88:25       0/1:100:52
+6      112635424       .       C       G       .       PASS    AA=C;DP=126     GT:GQ:DP        0/1:97:36       0/1:6:30        0/1:100:61
+18     41162389        rs12326278      C       T       .       PASS    AA=G;DP=149     GT:GQ:DP        0/1:97:36       0/1:98:29       0/1:100:85
+8      110406584       rs2926249       A       G       .       PASS    AA=A;DP=93      GT:GQ:DP        0/1:98:16       0/1:100:16      0/1:100:63
+14     98154880        rs11844751      C       T       .       PASS    AA=c;DP=88      GT:GQ:DP        0/1:98:19       0/1:51:13       0/1:100:55
+2      18624085        rs7594519       A       C       .       PASS    AA=C;DP=105     GT:GQ:DP        0/1:98:20       0/1:43:20       0/1:100:65
+2      67151208        rs4671771       A       G       .       PASS    AA=A;DP=114     GT:GQ:DP        0/1:98:22       0/1:70:22       0/1:100:74
+12     69960054        rs7955698       C       G       .       PASS    AA=G;DP=80      GT:GQ:DP        0/1:98:23       0/1:89:15       0/1:100:44
+11     125322609       .       A       G       .       PASS    AA=G;DP=127     GT:GQ:DP        0/1:98:24       0/1:76:17       0/1:100:86
+4      14985752        rs13139590      A       G       .       PASS    AA=A;DP=111     GT:GQ:DP        0/1:98:25       0/1:100:25      0/1:100:60
+4      1575611 rs4865441       A       G       .       PASS    AA=N;DP=82      GT:GQ:DP        0/1:98:25       0/1:41:18       0/1:100:32
+12     69552225        rs7313997       A       C       .       PASS    AA=C;DP=101     GT:GQ:DP        0/1:98:27       0/1:100:19      0/1:100:51
+1      148793030       rs6681639       C       T       .       PASS    AA=C;DP=88      GT:GQ:DP        0/1:98:27       0/1:28:12       0/1:100:42
+9      17427735        rs1372705       A       T       .       PASS    AA=T;DP=98      GT:GQ:DP        0/1:98:28       0/1:88:17       0/1:100:54
+20     12937663        rs189662        C       T       .       PASS    AA=T;DP=140     GT:GQ:DP        0/1:98:31       0/1:90:25       0/1:100:84
+6      33218323        rs3129241       A       C       .       PASS    AA=a;DP=88      GT:GQ:DP        0/1:99:17       0/1:38:18       0/1:100:48
+1      173897417       rs10798412      C       T       .       PASS    AA=T;DP=106;HM2;HM3     GT:GQ:DP        0/1:99:17       0/1:93:14       0/1:100:74
+4      22886196        rs57055370      A       G       .       PASS    AA=G;DP=97      GT:GQ:DP        0/1:99:18       0/1:74:20       0/1:100:56
+10     87275277        rs11201663      C       T       .       PASS    AA=C;DP=122     GT:GQ:DP        0/1:99:20       0/1:100:22      0/1:100:80
+9      74875441        rs12336984      A       T       .       PASS    AA=A;DP=110     GT:GQ:DP        0/1:99:21       0/1:100:30      0/1:100:58
+5      75249516        .       A       C       .       PASS    AA=A;DP=82      GT:GQ:DP        0/1:99:21       0/1:30:23       0/1:100:39
+14     38227582        rs61999041      A       G       .       PASS    AA=A;DP=83      GT:GQ:DP        0/1:99:21       0/1:50:16       0/1:100:46
+20     11119814        .       A       G       .       PASS    AA=A;DP=103     GT:GQ:DP        0/1:99:22       0/1:100:16      0/1:100:67
+1      104999733       rs12137474      A       T       .       PASS    AA=A;DP=106     GT:GQ:DP        0/1:99:22       0/1:80:23       0/1:100:63
+17     14551054        rs9915483       A       G       .       PASS    AA=A;DP=104     GT:GQ:DP        0/1:99:26       0/1:53:22       0/1:100:57
+16     87357323        rs11861910      C       T       .       PASS    AA=C;DP=129     GT:GQ:DP        0/1:99:29       0/1:88:20       0/1:100:76
+1      245602158       rs10399826      A       G       .       PASS    AA=G;DP=111;HM2;HM3     GT:GQ:DP        0/1:99:31       0/1:31:15       0/1:100:62
+8      1914268 rs34363015      A       G       .       PASS    AA=A;DP=117     GT:GQ:DP        0/1:99:32       0/1:60:15       0/1:100:69
+3      9848424 rs11712124      A       G       .       PASS    AA=G;DP=125     GT:GQ:DP        0/1:99:32       0/1:76:25       0/1:100:70
+7      57718379        .       C       T       .       PASS    AA=.;DP=171     GT:GQ:DP        0/1:99:43       0/1:100:37      0/1:100:92
+3      190877307       rs28887633      C       T       .       PASS    AA=c;DP=106     GT:GQ:DP        0/1:9:27        0/1:50:15       0/1:100:66
+7      57931476        .       A       G       .       PASS    AA=.;DP=133     GT:GQ:DP        0/1:9:27        0/1:9:18        0/1:67:54
+11     119068874       .       G       A       .       PASS    AA=g;DP=99      GT:GQ:DP        0|0:100:32      0|1:100:10      0|0:100:57
+12     51897747        .       G       T       .       PASS    AA=g;DP=102     GT:GQ:DP        0|0:100:32      0|1:100:10      0|0:100:60
+2      171500675       rs12471930      C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        0|0:100:32      0|1:100:13      0|0:100:71
+13     38154198        rs17058423      A       T       .       PASS    AA=T;DP=120     GT:GQ:DP        0|0:100:32      0|1:100:13      0|0:100:73
+3      188070312       .       C       T       .       PASS    AA=C;DP=94      GT:GQ:DP        0|0:100:32      0|1:100:14      0|0:100:50
+11     66966465        .       C       T       .       PASS    AA=C;DP=112     GT:GQ:DP        0|0:100:32      0|1:100:14      0|0:100:66
+18     45115610        rs9635952       T       C       .       PASS    AA=T;DP=114     GT:GQ:DP        0|0:100:32      0|1:100:15      0|0:100:67
+16     83305004        rs9929430       G       A       .       PASS    AA=g;DP=121     GT:GQ:DP        0|0:100:32      0|1:100:15      0|0:100:72
+4      121840395       rs1390564       T       C       .       PASS    AA=T;DP=118     GT:GQ:DP        0|0:100:32      0|1:100:15      0|0:100:72
+3      169273942       .       C       G       .       PASS    AA=C;DP=95      GT:GQ:DP        0|0:100:32      0|1:100:16      0|0:100:45
+3      193914961       .       A       G       .       PASS    AA=A;DP=106     GT:GQ:DP        0|0:100:32      0|1:100:16      0|0:100:57
+6      25387137        rs6909014       C       A       .       PASS    AA=A;DP=106     GT:GQ:DP        0|0:100:32      0|1:100:16      0|0:100:58
+1      243544006       rs9428355       A       G       .       PASS    AA=A;DP=117;HM2 GT:GQ:DP        0|0:100:32      0|1:100:16      0|0:100:65
+18     70975858        rs57343582      G       A       .       PASS    AA=G;DP=130     GT:GQ:DP        0|0:100:32      0|1:100:16      0|0:100:81
+2      149582767       rs56149977      G       A       .       PASS    AA=G;DP=128     GT:GQ:DP        0|0:100:32      0|1:100:17      0|0:100:36
+20     22748690        rs6048366       T       C       .       PASS    AA=C;DP=109     GT:GQ:DP        0|0:100:32      0|1:100:17      0|0:100:48
+4      8012753 .       A       G       .       PASS    AA=N;DP=120     GT:GQ:DP        0|0:100:32      0|1:100:17      0|0:100:73
+2      141671758       rs982791        T       C       .       PASS    AA=T;DP=129     GT:GQ:DP        0|0:100:32      0|1:100:18      0|0:100:40
+7      124538028       .       A       T       .       PASS    AA=T;DP=103     GT:GQ:DP        0|0:100:32      0|1:100:18      0|0:100:51
+11     114078426       rs1630838       G       A       .       PASS    AA=G;DP=105     GT:GQ:DP        0|0:100:32      0|1:100:18      0|0:100:55
+11     22848750        rs4486627       A       G       .       PASS    AA=A;DP=113     GT:GQ:DP        0|0:100:32      0|1:100:18      0|0:100:62
+2      43782281        .       C       T       .       PASS    AA=C;DP=112     GT:GQ:DP        0|0:100:32      0|1:100:18      0|0:100:63
+8      55599688        rs9298505       G       A       .       PASS    AA=G;DP=114     GT:GQ:DP        0|0:100:32      0|1:100:18      0|0:100:66
+7      84752941        .       C       T       .       PASS    AA=C;DP=116     GT:GQ:DP        0|0:100:32      0|1:100:18      0|0:100:71
+9      4625923 rs3901462       G       A       .       PASS    AA=G;DP=126     GT:GQ:DP        0|0:100:32      0|1:100:18      0|0:100:77
+2      174787371       rs12328930      T       C       .       PASS    AA=T;DP=98      GT:GQ:DP        0|0:100:32      0|1:100:19      0|0:100:46
+3      51857498        .       G       A       .       PASS    AA=g;DP=112     GT:GQ:DP        0|0:100:32      0|1:100:19      0|0:100:64
+7      149781534       rs6961774       C       T       .       PASS    AA=C;DP=133     GT:GQ:DP        0|0:100:32      0|1:100:19      0|0:100:84
+2      169091158       rs13422092      C       T       .       PASS    AA=c;DP=133     GT:GQ:DP        0|0:100:32      0|1:100:20      0|0:100:39
+8      95293456        rs16916611      T       C       .       PASS    AA=T;DP=131     GT:GQ:DP        0|0:100:32      0|1:100:20      0|0:100:39
+4      142867537       .       T       C       .       PASS    AA=T;DP=116     GT:GQ:DP        0|0:100:32      0|1:100:20      0|0:100:67
+2      44839415        rs343945        A       C       .       PASS    AA=A;DP=128     GT:GQ:DP        0|0:100:32      0|1:100:20      0|0:100:77
+4      30233260        rs13105504      C       T       .       PASS    AA=T;DP=100     GT:GQ:DP        0|0:100:32      0|1:100:21      0|0:100:47
+10     17053076        rs59085962      C       T       .       PASS    AA=c;DP=125     GT:GQ:DP        0|0:100:32      0|1:100:21      0|0:100:73
+18     13812658        .       G       A       .       PASS    AA=G;DP=133     GT:GQ:DP        0|0:100:32      0|1:100:21      0|0:100:81
+8      70659097        .       A       G       .       PASS    AA=a;DP=136     GT:GQ:DP        0|0:100:32      0|1:100:21      0|0:100:82
+8      140439657       rs56854630      T       C       .       PASS    AA=T;DP=95      GT:GQ:DP        0|0:100:32      0|1:100:21      0|0:93:31
+22     31296315        rs3788457       A       T       .       PASS    AA=T;DP=135     GT:GQ:DP        0|0:100:32      0|1:100:22      0|0:100:40
+14     67301349        rs11158692      A       G       .       PASS    AA=A;DP=103     GT:GQ:DP        0|0:100:32      0|1:100:22      0|0:100:49
+3      17297697        rs17043279      G       A       .       PASS    AA=G;DP=147     GT:GQ:DP        0|0:100:32      0|1:100:22      0|0:100:52
+2      163158310       rs10930060      T       C       .       PASS    AA=T;DP=109     GT:GQ:DP        0|0:100:32      0|1:100:22      0|0:100:56
+11     100650560       rs10895087      C       A       .       PASS    AA=C;DP=133     GT:GQ:DP        0|0:100:32      0|1:100:22      0|0:100:80
+5      110432084       rs17551370      G       A       .       PASS    AA=G;DP=130     GT:GQ:DP        0|0:100:32      0|1:100:22      0|0:100:80
+13     45215177        .       G       A       .       PASS    AA=A;DP=139     GT:GQ:DP        0|0:100:32      0|1:100:23      0|0:100:41
+9      119370042       rs1832285       A       T       .       PASS    AA=A;DP=136     GT:GQ:DP        0|0:100:32      0|1:100:23      0|0:100:41
+8      140001997       rs17742033      A       C       .       PASS    AA=C;DP=122     GT:GQ:DP        0|0:100:32      0|1:100:23      0|0:100:68
+11     132537802       .       G       A       .       PASS    AA=A;DP=122     GT:GQ:DP        0|0:100:32      0|1:100:23      0|0:100:70
+1      226107213       rs6702416       C       T       .       PASS    AA=C;DP=131     GT:GQ:DP        0|0:100:32      0|1:100:23      0|0:100:74
+3      170449519       .       C       T       .       PASS    AA=C;DP=127     GT:GQ:DP        0|0:100:32      0|1:100:23      0|0:100:74
+17     51186078        rs57688407      C       G       .       PASS    AA=C;DP=140     GT:GQ:DP        0|0:100:32      0|1:100:23      0|0:100:88
+17     4483581 rs11568125      G       A       .       PASS    AA=G;DP=128     GT:GQ:DP        0|0:100:32      0|1:100:24      0|0:100:37
+9      123283335       rs10818554      A       G       .       PASS    AA=G;DP=139     GT:GQ:DP        0|0:100:32      0|1:100:24      0|0:100:37
+9      36014196        rs7032095       G       A       .       PASS    AA=G;DP=152     GT:GQ:DP        0|0:100:32      0|1:100:24      0|0:100:44
+2      58888912        .       G       A       .       PASS    AA=G;DP=151     GT:GQ:DP        0|0:100:32      0|1:100:24      0|0:100:48
+3      133010816       .       G       A       .       PASS    AA=G;DP=153     GT:GQ:DP        0|0:100:32      0|1:100:24      0|0:100:57
+10     35846369        .       A       G       .       PASS    AA=A;DP=123     GT:GQ:DP        0|0:100:32      0|1:100:24      0|0:100:67
+2      169034311       .       C       T       .       PASS    AA=C;DP=138     GT:GQ:DP        0|0:100:32      0|1:100:24      0|0:100:83
+9      125829029       rs3780683       C       T       .       PASS    AA=C;DP=136     GT:GQ:DP        0|0:100:32      0|1:100:25      0|0:100:38
+20     19126627        .       G       T       .       PASS    AA=G;DP=103     GT:GQ:DP        0|0:100:32      0|1:100:25      0|0:100:46
+5      98721935        rs56761564      T       C       .       PASS    AA=T;DP=110     GT:GQ:DP        0|0:100:32      0|1:100:25      0|0:100:54
+15     44662533        .       C       T       .       PASS    AA=C;DP=123     GT:GQ:DP        0|0:100:32      0|1:100:25      0|0:100:66
+19     14504508        rs10408321      G       A       .       PASS    AA=N;DP=121     GT:GQ:DP        0|0:100:32      0|1:100:25      0|0:100:67
+6      159455176       rs9365030       T       C       .       PASS    AA=T;DP=126     GT:GQ:DP        0|0:100:32      0|1:100:25      0|0:100:68
+5      67675382        .       C       T       .       PASS    AA=T;DP=132     GT:GQ:DP        0|0:100:32      0|1:100:25      0|0:100:73
+12     27420486        rs4964059       A       C       .       PASS    AA=C;DP=132     GT:GQ:DP        0|0:100:32      0|1:100:25      0|0:100:74
+20     51138113        .       G       A       .       PASS    AA=G;DP=148     GT:GQ:DP        0|0:100:32      0|1:100:25      0|0:100:74
+17     21817761        rs1382623       A       C       .       PASS    AA=a;DP=140     GT:GQ:DP        0|0:100:32      0|1:100:25      0|0:100:82
+5      37968468        .       C       T       .       PASS    AA=C;DP=137     GT:GQ:DP        0|0:100:32      0|1:100:25      0|0:100:86
+9      135899101       rs10114627      C       T       .       PASS    AA=C;DP=153     GT:GQ:DP        0|0:100:32      0|1:100:25      0|0:100:97
+11     123066346       rs61904936      G       C       .       PASS    AA=C;DP=137     GT:GQ:DP        0|0:100:32      0|1:100:26      0|0:100:37
+15     63636438        .       G       A       .       PASS    AA=G;DP=157     GT:GQ:DP        0|0:100:32      0|1:100:26      0|0:100:47
+15     49346358        rs28757140      G       C       .       PASS    AA=G;DP=162     GT:GQ:DP        0|0:100:32      0|1:100:26      0|0:100:51
+17     12590514        rs12451509      A       G       .       PASS    AA=A;DP=112     GT:GQ:DP        0|0:100:32      0|1:100:26      0|0:100:53
+7      155689662       rs28672344      G       T       .       PASS    AA=G;DP=117     GT:GQ:DP        0|0:100:32      0|1:100:26      0|0:100:59
+8      126830394       rs13267146      A       C       .       PASS    AA=A;DP=123     GT:GQ:DP        0|0:100:32      0|1:100:26      0|0:100:68
+10     84690636        .       A       G       .       PASS    AA=A;DP=156     GT:GQ:DP        0|0:100:32      0|1:100:26      0|0:100:98
+9      5856428 .       C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        0|0:100:32      0|1:100:27      0|0:100:59
+13     60192665        rs7982320       G       A       .       PASS    AA=A;DP=126     GT:GQ:DP        0|0:100:32      0|1:100:27      0|0:100:65
+7      82230652        .       C       T       .       PASS    AA=T;DP=136     GT:GQ:DP        0|0:100:32      0|1:100:27      0|0:100:77
+17     30487931        .       C       T       .       PASS    AA=C;DP=140     GT:GQ:DP        0|0:100:32      0|1:100:27      0|0:100:81
+5      62624652        .       G       A       .       PASS    AA=G;DP=141     GT:GQ:DP        0|0:100:32      0|1:100:27      0|0:100:84
+21     39828821        .       G       C       .       PASS    AA=G;DP=118     GT:GQ:DP        0|0:100:32      0|1:100:28      0|0:100:58
+4      161247719       rs59613123      G       A       .       PASS    AA=G;DP=126     GT:GQ:DP        0|0:100:32      0|1:100:28      0|0:100:65
+3      103204292       rs7625376       G       A       .       PASS    AA=G;DP=141     GT:GQ:DP        0|0:100:32      0|1:100:28      0|0:100:73
+8      11783903        .       C       T       .       PASS    AA=C;DP=146     GT:GQ:DP        0|0:100:32      0|1:100:28      0|0:100:83
+3      178191811       .       G       A       .       PASS    AA=G;DP=157     GT:GQ:DP        0|0:100:32      0|1:100:28      0|0:100:99
+5      171780279       rs17653344      T       C       .       PASS    AA=T;DP=128     GT:GQ:DP        0|0:100:32      0|1:100:29      0|0:100:67
+1      160398743       rs12071520      C       T       .       PASS    AA=C;DP=135;HM2 GT:GQ:DP        0|0:100:32      0|1:100:29      0|0:100:74
+15     84597320        rs28420295      G       T       .       PASS    AA=G;DP=141     GT:GQ:DP        0|0:100:32      0|1:100:29      0|0:94:39
+17     64898311        rs333925        T       G       .       PASS    AA=T;DP=119     GT:GQ:DP        0|0:100:32      0|1:100:30      0|0:100:57
+20     15540468        .       T       C       .       PASS    AA=T;DP=127     GT:GQ:DP        0|0:100:32      0|1:100:30      0|0:100:66
+20     7307980 .       G       T       .       PASS    AA=G;DP=135     GT:GQ:DP        0|0:100:32      0|1:100:30      0|0:100:73
+7      143804005       rs1987569       T       C       .       PASS    AA=t;DP=137     GT:GQ:DP        0|0:100:32      0|1:100:30      0|0:100:76
+7      115195906       .       C       T       .       PASS    AA=C;DP=140     GT:GQ:DP        0|0:100:32      0|1:100:30      0|0:100:79
+5      169623658       .       C       A       .       PASS    AA=C;DP=140     GT:GQ:DP        0|0:100:32      0|1:100:30      0|0:100:80
+6      36257226        rs9462162       T       C       .       PASS    AA=T;DP=150     GT:GQ:DP        0|0:100:32      0|1:100:30      0|0:100:90
+15     59460379        rs55934541      T       C       .       PASS    AA=T;DP=134     GT:GQ:DP        0|0:100:32      0|1:100:31      0|0:100:72
+2      47389042        .       T       G       .       PASS    AA=t;DP=155     GT:GQ:DP        0|0:100:32      0|1:100:31      0|0:100:92
+8      105437475       .       T       C       .       PASS    AA=T;DP=131     GT:GQ:DP        0|0:100:32      0|1:100:32      0|0:100:70
+4      52811230        rs17086356      C       G       .       PASS    AA=C;DP=133     GT:GQ:DP        0|0:100:32      0|1:100:32      0|0:100:72
+7      39830409        rs12701771      C       T       .       PASS    AA=c;DP=138     GT:GQ:DP        0|0:100:32      0|1:100:32      0|0:100:77
+6      40514299        .       C       G       .       PASS    AA=C;DP=141     GT:GQ:DP        0|0:100:32      0|1:100:32      0|0:100:82
+7      12916225        rs975205        T       C       .       PASS    AA=T;DP=127     GT:GQ:DP        0|0:100:32      0|1:100:33      0|0:100:61
+4      43284732        rs61734809      C       T       .       PASS    AA=C;DP=133     GT:GQ:DP        0|0:100:32      0|1:100:33      0|0:100:64
+6      93118804        rs12191471      T       C       .       PASS    AA=T;DP=163     GT:GQ:DP        0|0:100:32      0|1:100:33      0|0:100:81
+2      78541789        rs7570801       C       A       .       PASS    AA=C;DP=138     GT:GQ:DP        0|0:100:32      0|1:100:37      0|0:100:71
+X      742416  .       G       A       .       PASS    AA=.;DP=84      GT:GQ:DP        0|0:100:33      0|1:100:12      0|0:100:37
+9      137757124       rs1537416       T       C       .       PASS    AA=t;DP=115     GT:GQ:DP        0|0:100:33      0|1:100:12      0|0:100:69
+6      167335430       rs6456143       C       A       .       PASS    AA=A;DP=116     GT:GQ:DP        0|0:100:33      0|1:100:12      0|0:100:72
+6      108714275       rs520763        G       C       .       PASS    AA=G;DP=109     GT:GQ:DP        0|0:100:33      0|1:100:14      0|0:100:62
+17     25584167        rs56222215      T       C       .       PASS    AA=T;DP=131     GT:GQ:DP        0|0:100:33      0|1:100:14      0|0:100:85
+5      170793014       rs11952217      G       A       .       PASS    AA=G;DP=134     GT:GQ:DP        0|0:100:33      0|1:100:14      0|0:100:87
+7      157808765       rs28682392      A       G       .       PASS    AA=N;DP=108     GT:GQ:DP        0|0:100:33      0|1:100:15      0|0:100:61
+5      45268657        .       G       T       .       PASS    AA=G;DP=126     GT:GQ:DP        0|0:100:33      0|1:100:15      0|0:100:67
+3      197710701       .       T       C       .       PASS    AA=T;DP=138     GT:GQ:DP        0|0:100:33      0|1:100:16      0|0:100:48
+11     55913703        .       T       C       .       PASS    AA=T;DP=99      GT:GQ:DP        0|0:100:33      0|1:100:16      0|0:100:49
+7      55439136        rs11524163      A       C       .       PASS    AA=A;DP=117     GT:GQ:DP        0|0:100:33      0|1:100:16      0|0:100:65
+16     86402541        .       C       A       .       PASS    AA=C;DP=119     GT:GQ:DP        0|0:100:33      0|1:100:16      0|0:100:71
+10     55451137        rs718310        T       C       .       PASS    AA=T;DP=127     GT:GQ:DP        0|0:100:33      0|1:100:16      0|0:100:78
+18     32266618        .       A       G       .       PASS    AA=A;DP=128     GT:GQ:DP        0|0:100:33      0|1:100:16      0|0:100:81
+6      30482316        rs9261777       C       T       .       PASS    AA=N;DP=135     GT:GQ:DP        0|0:100:33      0|1:100:16      0|0:100:92
+1      40700468        rs3817925       C       T       .       PASS    AA=C;DP=116     GT:GQ:DP        0|0:100:33      0|1:100:17      0|0:100:66
+2      207225275       rs58044448      T       C       .       PASS    AA=T;DP=115     GT:GQ:DP        0|0:100:33      0|1:100:17      0|0:100:66
+3      35400099        rs12638033      C       T       .       PASS    AA=C;DP=121     GT:GQ:DP        0|0:100:33      0|1:100:17      0|0:100:69
+11     74359057        rs568758        A       G       .       PASS    AA=A;DP=122     GT:GQ:DP        0|0:100:33      0|1:100:17      0|0:100:71
+1      147427061       rs3853524       C       T       .       PASS    AA=.;DP=159;HM2 GT:GQ:DP        0|0:100:33      0|1:100:18      0|0:100:63
+1      209595330       .       C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        0|0:100:33      0|1:100:18      0|0:100:63
+6      90016919        rs282124        C       T       .       PASS    AA=C;DP=118     GT:GQ:DP        0|0:100:33      0|1:100:18      0|0:100:68
+4      40754704        rs13148401      T       C       .       PASS    AA=C;DP=120     GT:GQ:DP        0|0:100:33      0|1:100:18      0|0:100:72
+17     20622291        rs56659553      T       C       .       PASS    AA=N;DP=138     GT:GQ:DP        0|0:100:33      0|1:100:19      0|0:100:42
+12     7654964 .       G       A       .       PASS    AA=G;DP=95      GT:GQ:DP        0|0:100:33      0|1:100:19      0|0:100:44
+3      18119926        rs17044284      A       C       .       PASS    AA=C;DP=105     GT:GQ:DP        0|0:100:33      0|1:100:19      0|0:100:55
+4      11069169        .       A       G       .       PASS    AA=A;DP=115     GT:GQ:DP        0|0:100:33      0|1:100:19      0|0:100:65
+14     24133805        .       G       T       .       PASS    AA=G;DP=118     GT:GQ:DP        0|0:100:33      0|1:100:19      0|0:100:66
+2      15886548        .       C       G       .       PASS    AA=C;DP=121     GT:GQ:DP        0|0:100:33      0|1:100:19      0|0:100:72
+5      178556707       rs2279979       C       T       .       PASS    AA=C;DP=132     GT:GQ:DP        0|0:100:33      0|1:100:19      0|0:100:81
+17     6273090 rs34453366      A       C       .       PASS    AA=C;DP=140     GT:GQ:DP        0|0:100:33      0|1:100:19      0|0:100:86
+3      4080065 .       G       C       .       PASS    AA=G;DP=114     GT:GQ:DP        0|0:100:33      0|1:100:20      0|0:100:44
+21     39217046        rs2836759       G       A       .       PASS    AA=G;DP=111     GT:GQ:DP        0|0:100:33      0|1:100:20      0|0:100:58
+8      73956574        rs6993466       C       G       .       PASS    AA=G;DP=111     GT:GQ:DP        0|0:100:33      0|1:100:20      0|0:100:58
+9      114029559       .       G       A       .       PASS    AA=G;DP=113     GT:GQ:DP        0|0:100:33      0|1:100:20      0|0:100:61
+12     29523545        rs876875        G       A       .       PASS    AA=G;DP=115     GT:GQ:DP        0|0:100:33      0|1:100:20      0|0:100:62
+6      29789281        .       G       A       .       PASS    AA=.;DP=132     GT:GQ:DP        0|0:100:33      0|1:100:20      0|0:100:73
+1      56263334        rs58305300      A       G       .       PASS    AA=G;DP=140     GT:GQ:DP        0|0:100:33      0|1:100:20      0|0:100:90
+15     23861993        rs7166805       A       G       .       PASS    AA=G;DP=138     GT:GQ:DP        0|0:100:33      0|1:100:21      0|0:100:39
+1      118636049       .       C       T       .       PASS    AA=C;DP=154     GT:GQ:DP        0|0:100:33      0|1:100:21      0|0:100:52
+2      241816161       rs14345 A       C       .       PASS    AA=A;DP=147     GT:GQ:DP        0|0:100:33      0|1:100:21      0|0:100:54
+5      153338281       .       G       A       .       PASS    AA=G;DP=108     GT:GQ:DP        0|0:100:33      0|1:100:21      0|0:100:55
+14     39006009        rs28837388      A       G       .       PASS    AA=A;DP=108     GT:GQ:DP        0|0:100:33      0|1:100:21      0|0:100:59
+10     17446208        rs10795476      T       C       .       PASS    AA=T;DP=124     GT:GQ:DP        0|0:100:33      0|1:100:21      0|0:100:70
+4      119048255       rs4560487       A       G       .       PASS    AA=G;DP=123     GT:GQ:DP        0|0:100:33      0|1:100:21      0|0:100:74
+15     79181907        rs57587540      A       T       .       PASS    AA=a;DP=108     GT:GQ:DP        0|0:100:33      0|1:100:22      0|0:100:53
+X      2391374 rs5939408       G       A       .       PASS    AA=.;DP=112     GT:GQ:DP        0|0:100:33      0|1:100:22      0|0:100:53
+1      154382094       .       G       A       .       PASS    AA=G;DP=110     GT:GQ:DP        0|0:100:33      0|1:100:22      0|0:100:57
+2      197038079       .       C       T       .       PASS    AA=C;DP=114     GT:GQ:DP        0|0:100:33      0|1:100:22      0|0:100:60
+4      180639459       .       A       G       .       PASS    AA=A;DP=123     GT:GQ:DP        0|0:100:33      0|1:100:22      0|0:100:61
+3      117806138       rs12494097      G       A       .       PASS    AA=G;DP=130     GT:GQ:DP        0|0:100:33      0|1:100:22      0|0:100:77
+14     48584541        .       A       T       .       PASS    AA=A;DP=134     GT:GQ:DP        0|0:100:33      0|1:100:22      0|0:100:82
+1      234377744       .       G       A       .       PASS    AA=G;DP=144     GT:GQ:DP        0|0:100:33      0|1:100:22      0|0:100:88
+14     94314382        .       C       A       .       PASS    AA=C;DP=136     GT:GQ:DP        0|0:100:33      0|1:100:23      0|0:100:39
+7      123686692       rs2191470       G       A       .       PASS    AA=G;DP=143     GT:GQ:DP        0|0:100:33      0|1:100:23      0|0:100:47
+20     34575970        .       G       A       .       PASS    AA=G;DP=111     GT:GQ:DP        0|0:100:33      0|1:100:23      0|0:100:57
+21     25527889        rs2898097       A       C       .       PASS    AA=a;DP=112     GT:GQ:DP        0|0:100:33      0|1:100:23      0|0:100:57
+22     25717060        rs1018815       T       G       .       PASS    AA=A;DP=113     GT:GQ:DP        0|0:100:33      0|1:100:23      0|0:100:57
+9      119876609       .       A       C       .       PASS    AA=A;DP=113     GT:GQ:DP        0|0:100:33      0|1:100:23      0|0:100:60
+2      30524331        .       C       G       .       PASS    AA=C;DP=118     GT:GQ:DP        0|0:100:33      0|1:100:23      0|0:100:64
+1      223154232       rs6426163       A       G       .       PASS    AA=G;DP=125;HM2 GT:GQ:DP        0|0:100:33      0|1:100:23      0|0:100:66
+16     83959351        .       T       C       .       PASS    AA=T;DP=122     GT:GQ:DP        0|0:100:33      0|1:100:23      0|0:100:67
+12     68648815        rs7311281       G       A       .       PASS    AA=A;DP=135     GT:GQ:DP        0|0:100:33      0|1:100:23      0|0:100:77
+12     129723468       .       G       A       .       PASS    AA=g;DP=142     GT:GQ:DP        0|0:100:33      0|1:100:23      0|0:100:85
+6      134888806       rs11154773      C       T       .       PASS    AA=C;DP=104     GT:GQ:DP        0|0:100:33      0|1:100:23      0|0:75:25
+19     33694131        rs7247342       C       T       .       PASS    AA=T;DP=149     GT:GQ:DP        0|0:100:33      0|1:100:24      0|0:100:44
+15     37881723        .       C       T       .       PASS    AA=C;DP=167     GT:GQ:DP        0|0:100:33      0|1:100:24      0|0:100:53
+5      173782673       .       A       G       .       PASS    AA=A;DP=117     GT:GQ:DP        0|0:100:33      0|1:100:24      0|0:100:61
+5      35195134        .       A       G       .       PASS    AA=A;DP=123     GT:GQ:DP        0|0:100:33      0|1:100:24      0|0:100:67
+3      193603127       rs9843353       C       A       .       PASS    AA=C;DP=127     GT:GQ:DP        0|0:100:33      0|1:100:24      0|0:100:72
+21     35796308        rs7277882       G       A       .       PASS    AA=A;DP=136     GT:GQ:DP        0|0:100:33      0|1:100:24      0|0:100:79
+X      1473270 .       C       T       .       PASS    AA=c;DP=102     GT:GQ:DP        0|0:100:33      0|1:100:25      0|0:100:43
+18     46394236        rs4599004       C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        0|0:100:33      0|1:100:25      0|0:100:58
+2      216556096       rs3770543       T       C       .       PASS    AA=T;DP=135     GT:GQ:DP        0|0:100:33      0|1:100:25      0|0:100:61
+11     54616171        rs61898112      A       G       .       PASS    AA=.;DP=116     GT:GQ:DP        0|0:100:33      0|1:100:25      0|0:100:62
+17     41400930        .       G       A       .       PASS    AA=g;DP=122     GT:GQ:DP        0|0:100:33      0|1:100:25      0|0:100:62
+6      31095884        .       G       A       .       PASS    AA=G;DP=120     GT:GQ:DP        0|0:100:33      0|1:100:25      0|0:100:67
+11     32201418        rs16922965      G       A       .       PASS    AA=G;DP=126     GT:GQ:DP        0|0:100:33      0|1:100:25      0|0:100:70
+2      66947090        .       T       A       .       PASS    AA=T;DP=132     GT:GQ:DP        0|0:100:33      0|1:100:25      0|0:100:71
+15     93640196        .       C       T       .       PASS    AA=C;DP=129     GT:GQ:DP        0|0:100:33      0|1:100:25      0|0:100:73
+2      75112448        .       C       G       .       PASS    AA=C;DP=133     GT:GQ:DP        0|0:100:33      0|1:100:25      0|0:100:76
+1      10415527        rs524150        C       G       .       PASS    AA=G;DP=141;HM2 GT:GQ:DP        0|0:100:33      0|1:100:25      0|0:100:84
+3      152515049       rs9865758       G       C       .       PASS    AA=G;DP=160     GT:GQ:DP        0|0:100:33      0|1:100:25      0|0:100:85
+20     24713584        .       G       C       .       PASS    AA=G;DP=153     GT:GQ:DP        0|0:100:33      0|1:100:25      0|0:100:92
+3      58276946        rs9837903       A       T       .       PASS    AA=A;DP=147     GT:GQ:DP        0|0:100:33      0|1:100:26      0|0:100:47
+15     36015054        .       G       A       .       PASS    AA=A;DP=111     GT:GQ:DP        0|0:100:33      0|1:100:26      0|0:100:56
+7      67099038        rs35445029      C       T       .       PASS    AA=C;DP=130     GT:GQ:DP        0|0:100:33      0|1:100:26      0|0:100:71
+8      5771558 rs2703269       G       A       .       PASS    AA=A;DP=138     GT:GQ:DP        0|0:100:33      0|1:100:26      0|0:100:79
+3      48094561        .       G       T       .       PASS    AA=G;DP=139     GT:GQ:DP        0|0:100:33      0|1:100:26      0|0:100:83
+1      77523275        rs2602946       A       G       .       PASS    AA=A;DP=141;HM2 GT:GQ:DP        0|0:100:33      0|1:100:26      0|0:100:84
+5      88184755        .       C       T       .       PASS    AA=C;DP=151     GT:GQ:DP        0|0:100:33      0|1:100:26      0|0:100:90
+16     81205762        rs16957857      C       T       .       PASS    AA=C;DP=151     GT:GQ:DP        0|0:100:33      0|1:100:27      0|0:100:46
+4      4026650 .       G       A       .       PASS    AA=.;DP=157     GT:GQ:DP        0|0:100:33      0|1:100:27      0|0:100:56
+21     39449225        rs8128600       G       A       .       PASS    AA=G;DP=130     GT:GQ:DP        0|0:100:33      0|1:100:27      0|0:100:74
+6      4328932 .       A       G       .       PASS    AA=A;DP=136     GT:GQ:DP        0|0:100:33      0|1:100:27      0|0:100:74
+8      6528203 .       G       C       .       PASS    AA=G;DP=136     GT:GQ:DP        0|0:100:33      0|1:100:27      0|0:100:75
+6      87554494        rs2026898       A       G       .       PASS    AA=.;DP=147     GT:GQ:DP        0|0:100:33      0|1:100:28      0|0:100:45
+7      32146585        .       T       A       .       PASS    AA=T;DP=124     GT:GQ:DP        0|0:100:33      0|1:100:28      0|0:100:65
+4      79472287        rs345496        G       A       .       PASS    AA=A;DP=133     GT:GQ:DP        0|0:100:33      0|1:100:28      0|0:100:73
+12     41629809        rs10880395      A       G       .       PASS    AA=A;DP=135     GT:GQ:DP        0|0:100:33      0|1:100:28      0|0:100:74
+8      37045765        rs12547277      A       G       .       PASS    AA=A;DP=135     GT:GQ:DP        0|0:100:33      0|1:100:28      0|0:100:75
+11     110908749       rs11213934      T       C       .       PASS    AA=T;DP=140     GT:GQ:DP        0|0:100:33      0|1:100:28      0|0:100:77
+12     60831021        .       A       G       .       PASS    AA=A;DP=141     GT:GQ:DP        0|0:100:33      0|1:100:28      0|0:100:79
+7      84975847        rs1358539       T       A       .       PASS    AA=T;DP=138     GT:GQ:DP        0|0:100:33      0|1:100:28      0|0:100:79
+8      83382734        .       A       G       .       PASS    AA=A;DP=141     GT:GQ:DP        0|0:100:33      0|1:100:28      0|0:100:81
+5      102285736       .       G       C       .       PASS    AA=G;DP=150     GT:GQ:DP        0|0:100:33      0|1:100:28      0|0:100:92
+1      165324244       rs12038499      T       C       .       PASS    AA=C;DP=153     GT:GQ:DP        0|0:100:33      0|1:100:29      0|0:100:49
+7      146671814       rs7784277       G       T       .       PASS    AA=G;DP=122     GT:GQ:DP        0|0:100:33      0|1:100:29      0|0:100:60
+5      166010455       .       T       A       .       PASS    AA=T;DP=126     GT:GQ:DP        0|0:100:33      0|1:100:29      0|0:100:65
+3      10672934        .       G       A       .       PASS    AA=G;DP=132     GT:GQ:DP        0|0:100:33      0|1:100:29      0|0:100:71
+12     102437232       .       T       C       .       PASS    AA=T;DP=131     GT:GQ:DP        0|0:100:33      0|1:100:29      0|0:100:72
+16     55134171        rs12447611      C       G       .       PASS    AA=c;DP=136     GT:GQ:DP        0|0:100:33      0|1:100:29      0|0:100:75
+10     110954055       rs10884706      A       G       .       PASS    AA=G;DP=137     GT:GQ:DP        0|0:100:33      0|1:100:29      0|0:100:77
+3      37980243        .       A       G       .       PASS    AA=A;DP=145     GT:GQ:DP        0|0:100:33      0|1:100:29      0|0:100:79
+16     77752534        rs16949736      A       G       .       PASS    AA=A;DP=164     GT:GQ:DP        0|0:100:33      0|1:100:30      0|0:100:52
+7      124044759       rs13237697      G       A       .       PASS    AA=g;DP=166     GT:GQ:DP        0|0:100:33      0|1:100:30      0|0:100:55
+12     98339451        rs12367181      A       G       .       PASS    AA=a;DP=136     GT:GQ:DP        0|0:100:33      0|1:100:30      0|0:100:73
+2      82702793        .       C       T       .       PASS    AA=c;DP=147     GT:GQ:DP        0|0:100:33      0|1:100:30      0|0:100:84
+9      86993845        .       T       C       .       PASS    AA=T;DP=154     GT:GQ:DP        0|0:100:33      0|1:100:31      0|0:100:77
+20     48939155        .       G       A       .       PASS    AA=G;DP=161     GT:GQ:DP        0|0:100:33      0|1:100:31      0|0:100:99
+8      79893013        rs1838260       C       T       .       PASS    AA=C;DP=155     GT:GQ:DP        0|0:100:33      0|1:100:32      0|0:100:48
+11     82251970        rs7131380       G       A       .       PASS    AA=A;DP=134     GT:GQ:DP        0|0:100:33      0|1:100:32      0|0:100:63
+6      109216417       .       C       G       .       PASS    AA=C;DP=138     GT:GQ:DP        0|0:100:33      0|1:100:32      0|0:100:74
+14     33420049        .       T       C       .       PASS    AA=C;DP=150     GT:GQ:DP        0|0:100:33      0|1:100:33      0|0:100:47
+3      64278833        .       T       C       .       PASS    AA=T;DP=136     GT:GQ:DP        0|0:100:33      0|1:100:33      0|0:100:70
+3      131769542       .       T       C       .       PASS    AA=T;DP=138     GT:GQ:DP        0|0:100:33      0|1:100:33      0|0:100:76
+8      126724411       rs16900779      T       G       .       PASS    AA=T;DP=146     GT:GQ:DP        0|0:100:33      0|1:100:33      0|0:100:82
+11     67180525        .       G       A       .       PASS    AA=.;DP=125     GT:GQ:DP        0|0:100:33      0|1:100:34      0|0:100:60
+1      35636345        rs11264151      G       A       .       PASS    AA=G;DP=162;HM2 GT:GQ:DP        0|0:100:33      0|1:100:35      0|0:100:96
+5      110275554       .       C       A       .       PASS    AA=C;DP=151     GT:GQ:DP        0|0:100:33      0|1:100:36      0|0:100:82
+3      2594700 rs9859283       G       T       .       PASS    AA=G;DP=148     GT:GQ:DP        0|0:100:33      0|1:100:36      0|0:100:83
+5      37546806        rs62359006      G       A       .       PASS    AA=G;DP=151     GT:GQ:DP        0|0:100:33      0|1:100:37      0|0:100:41
+4      116154759       rs13142564      C       T       .       PASS    AA=C;DP=140     GT:GQ:DP        0|0:100:33      0|1:100:37      0|0:100:71
+2      61444002        rs61570897      C       T       .       PASS    AA=C;DP=166     GT:GQ:DP        0|0:100:33      0|1:100:40      0|0:96:33
+8      19713478        rs3899017       A       T       .       PASS    AA=A;DP=164     GT:GQ:DP        0|0:100:33      0|1:100:41      0|0:100:88
+7      97266037        .       G       A       .       PASS    AA=G;DP=184     GT:GQ:DP        0|0:100:33      0|1:100:44      0|0:100:107
+19     11352069        .       A       G       .       PASS    AA=a;DP=181     GT:GQ:DP        0|0:100:33      0|1:100:44      0|0:100:56
+7      128300314       .       G       A       .       PASS    AA=G;DP=103     GT:GQ:DP        0|0:100:33      0|1:100:7       0|0:100:62
+8      73161924        rs61594245      G       A       .       PASS    AA=G;DP=112     GT:GQ:DP        0|0:100:33      1|0:100:15      0|1:100:64
+6      140851026       .       A       G       .       PASS    AA=G;DP=126     GT:GQ:DP        0|0:100:33      1|0:100:16      0|1:100:76
+17     26180645        rs55658077      A       G       .       PASS    AA=A;DP=111     GT:GQ:DP        0|0:100:33      1|0:100:17      0|1:100:62
+2      130653133       rs13005599      G       T       .       PASS    AA=g;DP=128     GT:GQ:DP        0|0:100:33      1|0:100:17      0|1:100:78
+2      37795946        rs60359679      T       A       .       PASS    AA=T;DP=105     GT:GQ:DP        0|0:100:33      1|0:100:18      0|1:100:54
+3      150022439       rs16860985      A       T       .       PASS    AA=T;DP=106     GT:GQ:DP        0|0:100:33      1|0:100:18      0|1:100:55
+9      77225906        .       G       A       .       PASS    AA=G;DP=127     GT:GQ:DP        0|0:100:33      1|0:100:18      0|1:100:76
+2      49104475        rs12713034      A       G       .       PASS    AA=A;DP=133     GT:GQ:DP        0|0:100:33      1|0:100:18      0|1:100:84
+11     115128203       rs6589497       T       C       .       PASS    AA=C;DP=140     GT:GQ:DP        0|0:100:33      1|0:100:20      0|1:100:41
+18     11775133        rs59099814      T       C       .       PASS    AA=C;DP=120     GT:GQ:DP        0|0:100:33      1|0:100:20      0|1:100:66
+14     90279011        .       G       A       .       PASS    AA=G;DP=123     GT:GQ:DP        0|0:100:33      1|0:100:20      0|1:100:67
+12     78945028        rs7310907       G       A       .       PASS    AA=G;DP=124     GT:GQ:DP        0|0:100:33      1|0:100:20      0|1:100:74
+5      171595898       .       A       G       .       PASS    AA=A;DP=135     GT:GQ:DP        0|0:100:33      1|0:100:20      0|1:100:83
+2      117110259       rs13423069      A       C       .       PASS    AA=A;DP=84      GT:GQ:DP        0|0:100:33      1|0:100:20      0|1:95:31
+6      169195186       .       G       T       .       PASS    AA=G;DP=108     GT:GQ:DP        0|0:100:33      1|0:100:21      0|1:100:56
+5      152839875       rs520730        C       A       .       PASS    AA=C;DP=119     GT:GQ:DP        0|0:100:33      1|0:100:21      0|1:100:64
+9      3184672 .       G       C       .       PASS    AA=G;DP=119     GT:GQ:DP        0|0:100:33      1|0:100:21      0|1:100:65
+18     58840184        rs11872494      C       T       .       PASS    AA=T;DP=96      GT:GQ:DP        0|0:100:33      1|0:100:22      0|1:100:34
+12     70332040        .       A       G       .       PASS    AA=A;DP=114     GT:GQ:DP        0|0:100:33      1|0:100:22      0|1:100:53
+1      233840405       .       T       C       .       PASS    AA=T;DP=114     GT:GQ:DP        0|0:100:33      1|0:100:22      0|1:100:59
+22     23809473        .       A       G       .       PASS    AA=A;DP=128     GT:GQ:DP        0|0:100:33      1|0:100:22      0|1:100:73
+1      202554712       rs4483474       C       G       .       PASS    AA=C;DP=129;HM2 GT:GQ:DP        0|0:100:33      1|0:100:22      0|1:100:74
+10     99550908        .       G       A       .       PASS    AA=G;DP=142     GT:GQ:DP        0|0:100:33      1|0:100:22      0|1:100:81
+8      51773614        .       G       A       .       PASS    AA=G;DP=136     GT:GQ:DP        0|0:100:33      1|0:100:22      0|1:100:82
+5      117624764       rs17143939      G       A       .       PASS    AA=A;DP=111     GT:GQ:DP        0|0:100:33      1|0:100:23      0|1:100:55
+20     15590014        rs6110710       A       G       .       PASS    AA=A;DP=125     GT:GQ:DP        0|0:100:33      1|0:100:23      0|1:100:68
+18     34334581        .       G       A       .       PASS    AA=G;DP=126     GT:GQ:DP        0|0:100:33      1|0:100:23      0|1:100:69
+9      9839907 .       G       T       .       PASS    AA=G;DP=132     GT:GQ:DP        0|0:100:33      1|0:100:23      0|1:100:75
+5      5577086 rs2578518       G       A       .       PASS    AA=A;DP=132     GT:GQ:DP        0|0:100:33      1|0:100:23      0|1:100:76
+3      16965123        rs7630953       A       G       .       PASS    AA=A;DP=132     GT:GQ:DP        0|0:100:33      1|0:100:23      0|1:100:78
+11     122239027       rs1916040       A       G       .       PASS    AA=G;DP=107     GT:GQ:DP        0|0:100:33      1|0:100:24      0|1:100:50
+1      244341785       rs2297821       G       C       .       PASS    AA=G;DP=125     GT:GQ:DP        0|0:100:33      1|0:100:24      0|1:100:67
+12     83972118        rs7316341       C       G       .       PASS    AA=C;DP=126     GT:GQ:DP        0|0:100:33      1|0:100:24      0|1:100:69
+11     99016618        rs616533        C       T       .       PASS    AA=T;DP=129     GT:GQ:DP        0|0:100:33      1|0:100:24      0|1:100:72
+1      37148262        .       G       T       .       PASS    AA=G;DP=132     GT:GQ:DP        0|0:100:33      1|0:100:24      0|1:100:73
+14     100758702       .       C       T       .       PASS    AA=C;DP=138     GT:GQ:DP        0|0:100:33      1|0:100:25      0|1:100:65
+2      34180696        rs726258        A       G       .       PASS    AA=A;DP=124     GT:GQ:DP        0|0:100:33      1|0:100:25      0|1:100:67
+3      55582833        rs58298109      G       A       .       PASS    AA=G;DP=132     GT:GQ:DP        0|0:100:33      1|0:100:25      0|1:100:74
+8      98073281        rs2853263       T       C       .       PASS    AA=T;DP=131     GT:GQ:DP        0|0:100:33      1|0:100:25      0|1:100:74
+1      116789568       .       A       C       .       PASS    AA=A;DP=133     GT:GQ:DP        0|0:100:33      1|0:100:25      0|1:100:75
+3      21992601        .       C       T       .       PASS    AA=C;DP=137     GT:GQ:DP        0|0:100:33      1|0:100:25      0|1:100:79
+1      115642626       .       A       G       .       PASS    AA=A;DP=141     GT:GQ:DP        0|0:100:33      1|0:100:26      0|1:100:38
+5      57823343        .       G       A       .       PASS    AA=G;DP=121     GT:GQ:DP        0|0:100:33      1|0:100:26      0|1:100:62
+2      177420377       rs16864584      G       A       .       PASS    AA=G;DP=143     GT:GQ:DP        0|0:100:33      1|0:100:26      0|1:100:81
+21     38940354        rs2836590       C       T       .       PASS    AA=T;DP=140     GT:GQ:DP        0|0:100:33      1|0:100:26      0|1:100:83
+12     97472942        rs7963101       T       C       .       PASS    AA=T;DP=104     GT:GQ:DP        0|0:100:33      1|0:100:26      0|1:92:44
+5      41623098        rs650160        C       T       .       PASS    AA=C;DP=116     GT:GQ:DP        0|0:100:33      1|0:100:27      0|1:100:55
+6      69604604        rs505948        C       T       .       PASS    AA=T;DP=120     GT:GQ:DP        0|0:100:33      1|0:100:27      0|1:100:62
+3      188908326       rs3868898       T       A       .       PASS    AA=T;DP=147     GT:GQ:DP        0|0:100:33      1|0:100:28      0|1:100:42
+8      119827442       rs1389542       G       A       .       PASS    AA=G;DP=117     GT:GQ:DP        0|0:100:33      1|0:100:29      0|1:100:55
+19     33111476        .       G       T       .       PASS    AA=G;DP=131     GT:GQ:DP        0|0:100:33      1|0:100:29      0|1:100:65
+22     43034835        rs9614436       G       A       .       PASS    AA=G;DP=140     GT:GQ:DP        0|0:100:33      1|0:100:29      0|1:100:71
+19     7550278 rs62113364      C       T       .       PASS    AA=-;DP=139     GT:GQ:DP        0|0:100:33      1|0:100:29      0|1:100:79
+8      85200327        .       G       C       .       PASS    AA=C;DP=150     GT:GQ:DP        0|0:100:33      1|0:100:29      0|1:100:87
+1      175253073       rs7532760       G       A       .       PASS    AA=A;DP=129;HM2 GT:GQ:DP        0|0:100:33      1|0:100:30      0|1:100:66
+11     18183630        rs2468799       T       G       .       PASS    AA=.;DP=139     GT:GQ:DP        0|0:100:33      1|0:100:30      0|1:100:70
+6      117584325       rs2049528       G       A       .       PASS    AA=G;DP=149     GT:GQ:DP        0|0:100:33      1|0:100:30      0|1:100:88
+1      5394454 .       G       T       .       PASS    AA=N;DP=157     GT:GQ:DP        0|0:100:33      1|0:100:30      0|1:100:94
+4      187524091       rs749273        A       C       .       PASS    AA=A;DP=144     GT:GQ:DP        0|0:100:33      1|0:100:31      0|1:100:75
+2      144766094       rs10183920      T       C       .       PASS    AA=C;DP=154     GT:GQ:DP        0|0:100:33      1|0:100:31      0|1:100:90
+6      148339736       rs6938575       A       G       .       PASS    AA=A;DP=123     GT:GQ:DP        0|0:100:33      1|0:100:32      0|1:100:56
+11     86934767        .       G       A       .       PASS    AA=G;DP=145     GT:GQ:DP        0|0:100:33      1|0:100:32      0|1:100:82
+5      68314219        .       G       A       .       PASS    AA=G;DP=148     GT:GQ:DP        0|0:100:33      1|0:100:33      0|1:100:37
+11     34320344        rs7928840       C       G       .       PASS    AA=G;DP=172     GT:GQ:DP        0|0:100:33      1|0:100:33      0|1:100:55
+4      34844773        rs28460480      C       T       .       PASS    AA=T;DP=139     GT:GQ:DP        0|0:100:33      1|0:100:34      0|1:100:57
+11     80254847        .       T       C       .       PASS    AA=T;DP=134     GT:GQ:DP        0|0:100:33      1|0:100:34      0|1:100:69
+15     46633665        .       A       G       .       PASS    AA=G;DP=137     GT:GQ:DP        0|0:100:33      1|0:100:34      0|1:100:73
+4      13255135        rs28627780      T       C       .       PASS    AA=C;DP=143     GT:GQ:DP        0|0:100:33      1|0:100:34      0|1:100:75
+7      135456865       .       C       T       .       PASS    AA=T;DP=149     GT:GQ:DP        0|0:100:33      1|0:100:34      0|1:100:85
+8      18315895        rs62493023      T       C       .       PASS    AA=T;DP=143     GT:GQ:DP        0|0:100:33      1|0:100:35      0|1:100:74
+9      13020676        rs7848632       A       C       .       PASS    AA=A;DP=142     GT:GQ:DP        0|0:100:33      1|0:100:35      0|1:100:76
+9      5898326 rs28431078      T       C       .       PASS    AA=T;DP=145     GT:GQ:DP        0|0:100:33      1|0:100:35      0|1:100:76
+12     14945283        rs7294636       G       A       .       PASS    AA=A;DP=130     GT:GQ:DP        0|0:100:33      1|0:100:36      0|1:100:57
+5      7383081 rs4702462       A       G       .       PASS    AA=a;DP=158     GT:GQ:DP        0|0:100:33      1|0:100:36      0|1:100:90
+10     111240925       rs57545889      G       A       .       PASS    AA=g;DP=148     GT:GQ:DP        0|0:100:33      1|0:100:38      0|1:100:77
+17     62005954        rs9900353       C       T       .       PASS    AA=C;DP=143     GT:GQ:DP        0|0:100:33      1|0:36:17       0|1:100:96
+3      13646403        rs41283999      C       T       .       PASS    AA=C;DP=100     GT:GQ:DP        0|0:100:33      1|0:36:9        0|1:100:58
+11     10150097        rs7105045       C       T       .       PASS    AA=C;DP=127     GT:GQ:DP        0|0:100:33      1|0:44:17       0|1:100:74
+10     88090654        .       C       T       .       PASS    AA=C;DP=114     GT:GQ:DP        0|0:100:33      1|0:45:15       0|1:100:64
+9      116297031       rs60596377      G       A       .       PASS    AA=G;DP=125     GT:GQ:DP        0|0:100:33      1|0:47:15       0|1:100:79
+5      144995357       .       G       C       .       PASS    AA=C;DP=107     GT:GQ:DP        0|0:100:33      1|0:57:19       0|1:100:58
+14     57310034        .       T       G       .       PASS    AA=T;DP=108     GT:GQ:DP        0|0:100:33      1|0:61:13       0|1:100:62
+2      4221059 rs2679476       G       T       .       PASS    AA=G;DP=107     GT:GQ:DP        0|0:100:33      1|0:72:17       0|1:100:56
+1      167087313       .       G       A       .       PASS    AA=G;DP=130     GT:GQ:DP        0|0:100:33      1|0:72:18       0|1:100:80
+8      139920973       .       C       T       .       PASS    AA=c;DP=130     GT:GQ:DP        0|0:100:33      1|0:72:19       0|1:100:78
+3      197779152       rs1124996       G       A       .       PASS    AA=G;DP=100     GT:GQ:DP        0|0:100:33      1|0:73:18       0|1:100:44
+20     61641062        rs310648        C       T       .       PASS    AA=C;DP=109     GT:GQ:DP        0|0:100:33      1|0:76:12       0|1:100:64
+19     59570386        rs57300918      G       A       .       PASS    AA=N;DP=111     GT:GQ:DP        0|0:100:33      1|0:77:18       0|1:100:63
+1      32258622        .       C       T       .       PASS    AA=T;DP=134     GT:GQ:DP        0|0:100:33      1|0:78:23       0|1:100:81
+8      85073776        .       T       C       .       PASS    AA=T;DP=126     GT:GQ:DP        0|0:100:33      1|0:81:18       0|1:100:76
+10     129943531       rs58275631      C       A       .       PASS    AA=C;DP=111     GT:GQ:DP        0|0:100:33      1|0:85:13       0|1:100:65
+3      72799928        .       C       T       .       PASS    AA=T;DP=141     GT:GQ:DP        0|0:100:33      1|0:87:24       0|1:100:83
+2      70523791        rs11890652      C       T       .       PASS    AA=C;DP=168     GT:GQ:DP        0|0:100:33      1|0:88:24       0|1:100:58
+10     122550905       rs2096420       G       A       .       PASS    AA=G;DP=140     GT:GQ:DP        0|0:100:33      1|0:88:24       0|1:100:78
+7      100932767       rs7800182       C       A       .       PASS    AA=A;DP=123     GT:GQ:DP        0|0:100:33      1|0:8:14        0|1:100:74
+3      82295548        rs9654014       C       A       .       PASS    AA=C;DP=113     GT:GQ:DP        0|0:100:33      1|0:97:22       0|1:100:57
+5      66011394        .       G       T       .       PASS    AA=G;DP=127     GT:GQ:DP        0|0:100:33      1|0:97:24       0|1:100:70
+18     4759873 rs28731103      C       T       .       PASS    AA=C;DP=151     GT:GQ:DP        0|0:100:33      1|0:99:17       0|1:100:52
+5      178523387       rs10072194      C       T       .       PASS    AA=T;DP=94      GT:GQ:DP        0|0:100:34      0|1:100:11      0|0:100:50
+2      82358042        .       T       C       .       PASS    AA=T;DP=113     GT:GQ:DP        0|0:100:34      0|1:100:12      0|0:100:70
+8      2731934 .       C       T       .       PASS    AA=c;DP=116     GT:GQ:DP        0|0:100:34      0|1:100:12      0|0:100:72
+12     46734541        .       A       G       .       PASS    AA=A;DP=119     GT:GQ:DP        0|0:100:34      0|1:100:13      0|0:100:71
+1      157450930       rs3027051       C       A       .       PASS    AA=t;DP=117;HM2 GT:GQ:DP        0|0:100:34      0|1:100:14      0|0:100:67
+1      56759225        rs12068535      G       A       .       PASS    AA=G;DP=114     GT:GQ:DP        0|0:100:34      0|1:100:14      0|0:100:67
+1      246209756       .       A       G       .       PASS    AA=A;DP=133     GT:GQ:DP        0|0:100:34      0|1:100:15      0|0:100:44
+18     63032564        rs58819234      G       A       .       PASS    AA=G;DP=112     GT:GQ:DP        0|0:100:34      0|1:100:15      0|0:100:65
+22     25255782        rs5761585       G       C       .       PASS    AA=G;DP=116     GT:GQ:DP        0|0:100:34      0|1:100:15      0|0:100:67
+5      150848285       rs10076469      C       G       .       PASS    AA=C;DP=124     GT:GQ:DP        0|0:100:34      0|1:100:15      0|0:100:76
+15     97367439        rs7496269       T       C       .       PASS    AA=t;DP=126     GT:GQ:DP        0|0:100:34      0|1:100:15      0|0:100:79
+8      2850106 .       T       C       .       PASS    AA=t;DP=127     GT:GQ:DP        0|0:100:34      0|1:100:15      0|0:100:79
+5      175909532       .       A       G       .       PASS    AA=G;DP=128     GT:GQ:DP        0|0:100:34      0|1:100:15      0|0:100:80
+2      220537633       rs6715566       C       T       .       PASS    AA=C;DP=101     GT:GQ:DP        0|0:100:34      0|1:100:16      0|0:100:50
+7      127848603       rs7781310       T       C       .       PASS    AA=T;DP=117     GT:GQ:DP        0|0:100:34      0|1:100:16      0|0:100:67
+3      62800005        rs57265743      G       T       .       PASS    AA=G;DP=102     GT:GQ:DP        0|0:100:34      0|1:100:17      0|0:100:51
+10     108675043       rs10786988      C       T       .       PASS    AA=c;DP=108     GT:GQ:DP        0|0:100:34      0|1:100:17      0|0:100:56
+3      154148305       .       T       G       .       PASS    AA=T;DP=115     GT:GQ:DP        0|0:100:34      0|1:100:17      0|0:100:63
+4      188948281       .       C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        0|0:100:34      0|1:100:17      0|0:100:63
+17     3441617 rs150846        A       G       .       PASS    AA=A;DP=121     GT:GQ:DP        0|0:100:34      0|1:100:17      0|0:100:69
+17     25027006        .       A       G       .       PASS    AA=A;DP=132     GT:GQ:DP        0|0:100:34      0|1:100:17      0|0:100:82
+7      154063168       .       T       C       .       PASS    AA=T;DP=132     GT:GQ:DP        0|0:100:34      0|1:100:17      0|0:100:82
+9      6545183 rs10815443      T       C       .       PASS    AA=T;DP=132     GT:GQ:DP        0|0:100:34      0|1:100:17      0|0:100:82
+19     51285731        .       C       T       .       PASS    AA=c;DP=145     GT:GQ:DP        0|0:100:34      0|1:100:17      0|0:100:94
+8      8160291 rs17154807      T       C       .       PASS    AA=T;DP=132     GT:GQ:DP        0|0:100:34      0|1:100:17      0|0:79:34
+12     96450815        .       C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        0|0:100:34      0|1:100:18      0|0:100:59
+20     25105447        .       C       T       .       PASS    AA=C;DP=162     GT:GQ:DP        0|0:100:34      0|1:100:18      0|0:100:60
+4      98811258        rs11945884      C       T       .       PASS    AA=C;DP=127     GT:GQ:DP        0|0:100:34      0|1:100:18      0|0:100:63
+12     99518212        .       A       G       .       PASS    AA=A;DP=120     GT:GQ:DP        0|0:100:34      0|1:100:18      0|0:100:66
+1      193815261       rs2790075       C       A       .       PASS    AA=C;DP=122;HM2;HM3     GT:GQ:DP        0|0:100:34      0|1:100:18      0|0:100:69
+2      159266693       .       T       A       .       PASS    AA=T;DP=125     GT:GQ:DP        0|0:100:34      0|1:100:18      0|0:100:71
+7      11896533        rs10242440      T       G       .       PASS    AA=T;DP=125     GT:GQ:DP        0|0:100:34      0|1:100:18      0|0:100:73
+8      18351302        rs62493056      G       C       .       PASS    AA=G;DP=129     GT:GQ:DP        0|0:100:34      0|1:100:18      0|0:100:76
+9      137155133       rs899839        A       G       .       PASS    AA=N;DP=133     GT:GQ:DP        0|0:100:34      0|1:100:18      0|0:100:81
+17     70541135        .       C       T       .       PASS    AA=C;DP=140     GT:GQ:DP        0|0:100:34      0|1:100:18      0|0:100:86
+2      111239339       .       A       G       .       PASS    AA=A;DP=136     GT:GQ:DP        0|0:100:34      0|1:100:19      0|0:100:68
+2      40275595        rs1641456       C       T       .       PASS    AA=c;DP=125     GT:GQ:DP        0|0:100:34      0|1:100:19      0|0:100:74
+14     50775106        .       T       A       .       PASS    AA=T;DP=127     GT:GQ:DP        0|0:100:34      0|1:100:19      0|0:100:75
+6      123190295       rs12210012      A       G       .       PASS    AA=A;DP=146     GT:GQ:DP        0|0:100:34      0|1:100:20      0|0:100:42
+15     92582908        rs10163015      C       T       .       PASS    AA=T;DP=142     GT:GQ:DP        0|0:100:34      0|1:100:20      0|0:100:48
+10     13927922        rs4750430       G       A       .       PASS    AA=G;DP=104     GT:GQ:DP        0|0:100:34      0|1:100:20      0|0:100:51
+3      96369857        .       T       G       .       PASS    AA=T;DP=106     GT:GQ:DP        0|0:100:34      0|1:100:20      0|0:100:52
+3      110431434       .       A       G       .       PASS    AA=A;DP=159     GT:GQ:DP        0|0:100:34      0|1:100:20      0|0:100:59
+7      12446661        rs10488159      C       G       .       PASS    AA=C;DP=127     GT:GQ:DP        0|0:100:34      0|1:100:20      0|0:100:73
+13     27196569        .       T       C       .       PASS    AA=T;DP=128     GT:GQ:DP        0|0:100:34      0|1:100:20      0|0:100:74
+5      72556291        rs6875977       C       T       .       PASS    AA=C;DP=127     GT:GQ:DP        0|0:100:34      0|1:100:20      0|0:100:77
+2      191599816       rs3024919       G       T       .       PASS    AA=T;DP=135     GT:GQ:DP        0|0:100:34      0|1:100:20      0|0:100:82
+12     6634816 .       A       G       .       PASS    AA=A;DP=136     GT:GQ:DP        0|0:100:34      0|1:100:20      0|0:100:83
+10     132492783       .       G       A       .       PASS    AA=G;DP=134     GT:GQ:DP        0|0:100:34      0|1:100:20      0|0:91:42
+20     20279145        .       C       T       .       PASS    AA=c;DP=115     GT:GQ:DP        0|0:100:34      0|1:100:21      0|0:100:61
+5      29178648        .       G       A       .       PASS    AA=g;DP=124     GT:GQ:DP        0|0:100:34      0|1:100:21      0|0:100:69
+7      49157796        .       G       A       .       PASS    AA=G;DP=124     GT:GQ:DP        0|0:100:34      0|1:100:21      0|0:100:69
+8      50125212        .       C       G       .       PASS    AA=.;DP=126     GT:GQ:DP        0|0:100:34      0|1:100:22      0|0:100:36
+3      82721877        rs56393049      T       C       .       PASS    AA=T;DP=141     GT:GQ:DP        0|0:100:34      0|1:100:22      0|0:100:43
+6      11687847        rs17476088      A       G       .       PASS    AA=A;DP=121     GT:GQ:DP        0|0:100:34      0|1:100:22      0|0:100:64
+8      121324319       .       C       T       .       PASS    AA=C;DP=132     GT:GQ:DP        0|0:100:34      0|1:100:22      0|0:100:76
+12     1236772 rs1544426       A       G       .       PASS    AA=A;DP=142     GT:GQ:DP        0|0:100:34      0|1:100:22      0|0:100:87
+6      149663992       rs9498306       C       T       .       PASS    AA=C;DP=144     GT:GQ:DP        0|0:100:34      0|1:100:22      0|0:100:87
+4      115590211       rs13434798      T       C       .       PASS    AA=T;DP=112     GT:GQ:DP        0|0:100:34      0|1:100:23      0|0:100:56
+10     76169519        .       G       A       .       PASS    AA=G;DP=120     GT:GQ:DP        0|0:100:34      0|1:100:23      0|0:100:63
+2      142203241       rs2118272       C       T       .       PASS    AA=C;DP=123     GT:GQ:DP        0|0:100:34      0|1:100:23      0|0:100:66
+18     41354584        rs2612571       C       A       .       PASS    AA=A;DP=129     GT:GQ:DP        0|0:100:34      0|1:100:23      0|0:100:73
+2      10957384        .       T       A       .       PASS    AA=T;DP=132     GT:GQ:DP        0|0:100:34      0|1:100:23      0|0:100:76
+16     27829143        .       A       T       .       PASS    AA=a;DP=131     GT:GQ:DP        0|0:100:34      0|1:100:23      0|0:100:77
+4      82883814        .       A       G       .       PASS    AA=A;DP=132     GT:GQ:DP        0|0:100:34      0|1:100:23      0|0:100:78
+13     58536705        rs7985340       A       G       .       PASS    AA=A;DP=144     GT:GQ:DP        0|0:100:34      0|1:100:23      0|0:100:84
+19     20656230        rs11670265      G       A       .       PASS    AA=.;DP=138     GT:GQ:DP        0|0:100:34      0|1:100:23      0|0:100:84
+3      185102360       rs9842636       C       T       .       PASS    AA=C;DP=142     GT:GQ:DP        0|0:100:34      0|1:100:23      0|0:100:86
+2      10528122        .       C       T       .       PASS    AA=C;DP=140     GT:GQ:DP        0|0:100:34      0|1:100:23      0|0:100:87
+20     36551872        rs56393481      A       G       .       PASS    AA=A;DP=144     GT:GQ:DP        0|0:100:34      0|1:100:23      0|0:100:88
+17     601070  .       T       C       .       PASS    AA=T;DP=135     GT:GQ:DP        0|0:100:34      0|1:100:23      0|0:66:28
+3      150498098       .       C       T       .       PASS    AA=C;DP=149     GT:GQ:DP        0|0:100:34      0|1:100:24      0|0:100:53
+7      93840733        .       G       A       .       PASS    AA=G;DP=119     GT:GQ:DP        0|0:100:34      0|1:100:24      0|0:100:59
+3      179411172       .       C       G       .       PASS    AA=-;DP=136     GT:GQ:DP        0|0:100:34      0|1:100:24      0|0:100:72
+9      131489916       rs10819558      T       A       .       PASS    AA=T;DP=134     GT:GQ:DP        0|0:100:34      0|1:100:24      0|0:100:76
+5      160617177       rs13361100      A       G       .       PASS    AA=A;DP=107     GT:GQ:DP        0|0:100:34      0|1:100:25      0|0:100:39
+18     73224524        rs4890819       G       A       .       PASS    AA=G;DP=116     GT:GQ:DP        0|0:100:34      0|1:100:25      0|0:100:56
+10     14331039        .       G       A       .       PASS    AA=G;DP=120     GT:GQ:DP        0|0:100:34      0|1:100:25      0|0:100:60
+6      68371284        rs2747156       T       G       .       PASS    AA=.;DP=119     GT:GQ:DP        0|0:100:34      0|1:100:25      0|0:100:60
+11     5628767 rs57956987      T       C       .       PASS    AA=T;DP=128     GT:GQ:DP        0|0:100:34      0|1:100:25      0|0:100:71
+2      221003988       rs7588283       T       C       .       PASS    AA=C;DP=133     GT:GQ:DP        0|0:100:34      0|1:100:25      0|0:100:75
+9      29463929        rs10969198      T       C       .       PASS    AA=t;DP=150     GT:GQ:DP        0|0:100:34      0|1:100:26      0|0:100:43
+15     67958829        rs6494835       T       A       .       PASS    AA=T;DP=168     GT:GQ:DP        0|0:100:34      0|1:100:26      0|0:100:45
+2      42332238        .       A       G       .       PASS    AA=A;DP=111     GT:GQ:DP        0|0:100:34      0|1:100:26      0|0:100:52
+15     98196603        rs12148499      G       C       .       PASS    AA=.;DP=119     GT:GQ:DP        0|0:100:34      0|1:100:26      0|0:100:61
+17     19822878        .       G       A       .       PASS    AA=G;DP=131     GT:GQ:DP        0|0:100:34      0|1:100:26      0|0:100:70
+4      171064458       rs6553472       G       A       .       PASS    AA=A;DP=135     GT:GQ:DP        0|0:100:34      0|1:100:26      0|0:100:74
+5      130721622       rs798415        T       G       .       PASS    AA=T;DP=142     GT:GQ:DP        0|0:100:34      0|1:100:26      0|0:100:84
+16     86253491        rs3812974       C       T       .       PASS    AA=C;DP=141     GT:GQ:DP        0|0:100:34      0|1:100:26      0|0:100:85
+2      16878084        .       G       A       .       PASS    AA=G;DP=147     GT:GQ:DP        0|0:100:34      0|1:100:26      0|0:100:88
+3      141275842       rs1317466       G       A       .       PASS    AA=-;DP=106     GT:GQ:DP        0|0:100:34      0|1:100:27      0|0:100:46
+13     101578628       rs60332470      G       A       .       PASS    AA=G;DP=152     GT:GQ:DP        0|0:100:34      0|1:100:27      0|0:100:54
+2      97684960        .       A       G       .       PASS    AA=A;DP=161     GT:GQ:DP        0|0:100:34      0|1:100:27      0|0:100:57
+6      73014808        rs9442760       G       A       .       PASS    AA=G;DP=122     GT:GQ:DP        0|0:100:34      0|1:100:27      0|0:100:62
+1      186932683       .       G       A       .       PASS    AA=g;DP=129     GT:GQ:DP        0|0:100:34      0|1:100:27      0|0:100:69
+7      102236158       .       C       G       .       PASS    AA=C;DP=141     GT:GQ:DP        0|0:100:34      0|1:100:27      0|0:100:80
+3      127254885       rs12630605      T       G       .       PASS    AA=T;DP=145     GT:GQ:DP        0|0:100:34      0|1:100:27      0|0:100:84
+10     4160651 .       G       A       .       PASS    AA=G;DP=147     GT:GQ:DP        0|0:100:34      0|1:100:27      0|0:100:86
+11     103374426       .       G       A       .       PASS    AA=G;DP=149     GT:GQ:DP        0|0:100:34      0|1:100:27      0|0:100:87
+9      18919635        .       G       A       .       PASS    AA=G;DP=117     GT:GQ:DP        0|0:100:34      0|1:100:28      0|0:100:44
+14     63658978        rs8022302       T       G       .       PASS    AA=T;DP=119     GT:GQ:DP        0|0:100:34      0|1:100:28      0|0:100:57
+3      72507354        rs11915062      G       A       .       PASS    AA=A;DP=145     GT:GQ:DP        0|0:100:34      0|1:100:28      0|0:100:86
+15     96621340        rs28698881      G       C       .       PASS    AA=.;DP=155     GT:GQ:DP        0|0:100:34      0|1:100:28      0|0:100:95
+18     54419781        .       C       T       .       PASS    AA=C;DP=150     GT:GQ:DP        0|0:100:34      0|1:100:29      0|0:100:47
+2      161240628       .       C       A       .       PASS    AA=C;DP=135     GT:GQ:DP        0|0:100:34      0|1:100:29      0|0:100:73
+20     59290822        rs2866011       A       G       .       PASS    AA=A;DP=118     GT:GQ:DP        0|0:100:34      0|1:100:30      0|0:100:53
+8      67781952        .       C       T       .       PASS    AA=C;DP=126     GT:GQ:DP        0|0:100:34      0|1:100:31      0|0:100:65
+12     123661223       .       A       C       .       PASS    AA=A;DP=137     GT:GQ:DP        0|0:100:34      0|1:100:31      0|0:100:73
+14     37016936        .       T       C       .       PASS    AA=T;DP=139     GT:GQ:DP        0|0:100:34      0|1:100:31      0|0:100:77
+13     32619545        .       G       A       .       PASS    AA=G;DP=153     GT:GQ:DP        0|0:100:34      0|1:100:31      0|0:100:86
+5      27885202        .       T       C       .       PASS    AA=T;DP=116     GT:GQ:DP        0|0:100:34      0|1:100:32      0|0:100:52
+4      150261916       rs10024845      C       A       .       PASS    AA=C;DP=144     GT:GQ:DP        0|0:100:34      0|1:100:32      0|0:100:78
+7      46723012        rs6942934       A       T       .       PASS    AA=A;DP=142     GT:GQ:DP        0|0:100:34      0|1:100:32      0|0:100:78
+8      19361550        rs4625053       A       G       .       PASS    AA=A;DP=136     GT:GQ:DP        0|0:100:34      0|1:100:32      0|0:93:31
+1      120141220       rs7516324       A       T       .       PASS    AA=A;DP=149     GT:GQ:DP        0|0:100:34      0|1:100:33      0|0:100:45
+20     42143348        rs1883681       A       G       .       PASS    AA=G;DP=123     GT:GQ:DP        0|0:100:34      0|1:100:33      0|0:100:57
+8      41785859        .       T       C       .       PASS    AA=T;DP=153     GT:GQ:DP        0|0:100:34      0|1:100:33      0|0:100:82
+5      108473820       .       G       T       .       PASS    AA=G;DP=134     GT:GQ:DP        0|0:100:34      0|1:100:34      0|0:100:65
+12     75665355        rs55718319      C       T       .       PASS    AA=C;DP=152     GT:GQ:DP        0|0:100:34      0|1:100:35      0|0:100:68
+10     91010481        .       G       A       .       PASS    AA=G;DP=131     GT:GQ:DP        0|0:100:34      0|1:100:36      0|0:100:49
+4      125088898       .       G       A       .       PASS    AA=G;DP=124     GT:GQ:DP        0|0:100:34      0|1:100:36      0|0:100:53
+1      213383549       rs55804708      G       A       .       PASS    AA=G;DP=131     GT:GQ:DP        0|0:100:34      0|1:100:36      0|0:100:61
+9      111558256       rs1327789       A       G       .       PASS    AA=A;DP=139     GT:GQ:DP        0|0:100:34      0|1:100:36      0|0:100:70
+6      142228043       rs12192669      C       T       .       PASS    AA=C;DP=147     GT:GQ:DP        0|0:100:34      0|1:100:38      0|0:100:78
+13     99256986        rs2806301       T       C       .       PASS    AA=T;DP=149     GT:GQ:DP        0|0:100:34      0|1:100:40      0|0:100:74
+12     63863720        rs2133323       T       G       .       PASS    AA=T;DP=126     GT:GQ:DP        0|0:100:34      1|0:100:13      0|1:100:77
+2      162369180       .       T       C       .       PASS    AA=T;DP=119     GT:GQ:DP        0|0:100:34      1|0:100:15      0|1:100:66
+11     1889777 .       A       G       .       PASS    AA=N;DP=94      GT:GQ:DP        0|0:100:34      1|0:100:16      0|1:100:44
+5      77058538        rs16874554      G       C       .       PASS    AA=G;DP=101     GT:GQ:DP        0|0:100:34      1|0:100:16      0|1:100:52
+4      89995318        .       G       A       .       PASS    AA=G;DP=123     GT:GQ:DP        0|0:100:34      1|0:100:16      0|1:100:72
+2      49824471        .       T       C       .       PASS    AA=T;DP=123     GT:GQ:DP        0|0:100:34      1|0:100:16      0|1:100:75
+8      119553812       rs60773930      A       G       .       PASS    AA=G;DP=122     GT:GQ:DP        0|0:100:34      1|0:100:17      0|1:100:70
+15     62682372        rs633275        T       G       .       PASS    AA=T;DP=128     GT:GQ:DP        0|0:100:34      1|0:100:18      0|1:100:35
+9      20262222        rs1031603       A       G       .       PASS    AA=A;DP=112     GT:GQ:DP        0|0:100:34      1|0:100:18      0|1:100:56
+3      11638395        rs7610146       C       T       .       PASS    AA=C;DP=111     GT:GQ:DP        0|0:100:34      1|0:100:18      0|1:100:60
+2      54209445        .       G       A       .       PASS    AA=G;DP=122     GT:GQ:DP        0|0:100:34      1|0:100:18      0|1:100:71
+7      65265375        .       A       C       .       PASS    AA=A;DP=124     GT:GQ:DP        0|0:100:34      1|0:100:18      0|1:100:76
+1      7849522 rs495122        C       T       .       PASS    AA=C;DP=126     GT:GQ:DP        0|0:100:34      1|0:100:18      0|1:100:77
+19     55234678        rs2278284       C       T       .       PASS    AA=C;DP=130     GT:GQ:DP        0|0:100:34      1|0:100:18      0|1:100:77
+13     95169382        .       G       C       .       PASS    AA=G;DP=144     GT:GQ:DP        0|0:100:34      1|0:100:18      0|1:100:87
+17     72629504        rs7213752       G       C       .       PASS    AA=C;DP=102     GT:GQ:DP        0|0:100:34      1|0:100:19      0|1:100:49
+2      60844099        rs12465044      G       A       .       PASS    AA=G;DP=103     GT:GQ:DP        0|0:100:34      1|0:100:19      0|1:100:49
+12     113658640       rs2062716       T       C       .       PASS    AA=C;DP=123     GT:GQ:DP        0|0:100:34      1|0:100:19      0|1:100:70
+22     33366904        rs5999485       C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        0|0:100:34      1|0:100:19      0|1:100:70
+19     44051373        .       G       C       .       PASS    AA=C;DP=137     GT:GQ:DP        0|0:100:34      1|0:100:19      0|1:100:86
+16     55675352        rs27191 C       G       .       PASS    AA=C;DP=97      GT:GQ:DP        0|0:100:34      1|0:100:20      0|1:100:45
+18     26182801        rs6508664       G       A       .       PASS    AA=G;DP=106     GT:GQ:DP        0|0:100:34      1|0:100:20      0|1:100:54
+21     17399759        .       A       T       .       PASS    AA=A;DP=157     GT:GQ:DP        0|0:100:34      1|0:100:20      0|1:100:55
+12     113154253       rs2701110       C       A       .       PASS    AA=C;DP=113     GT:GQ:DP        0|0:100:34      1|0:100:20      0|1:100:57
+6      116928886       .       C       T       .       PASS    AA=C;DP=112     GT:GQ:DP        0|0:100:34      1|0:100:20      0|1:100:59
+2      31429692        .       G       A       .       PASS    AA=G;DP=121     GT:GQ:DP        0|0:100:34      1|0:100:20      0|1:100:67
+12     94215198        rs17041180      T       C       .       PASS    AA=T;DP=122     GT:GQ:DP        0|0:100:34      1|0:100:20      0|1:100:69
+6      52630158        .       C       T       .       PASS    AA=C;DP=123     GT:GQ:DP        0|0:100:34      1|0:100:20      0|1:100:70
+17     23339486        rs57775649      C       T       .       PASS    AA=C;DP=129     GT:GQ:DP        0|0:100:34      1|0:100:20      0|1:100:76
+3      70552497        rs2320798       C       G       .       PASS    AA=C;DP=110     GT:GQ:DP        0|0:100:34      1|0:100:21      0|1:100:57
+10     132958273       rs10829966      G       T       .       PASS    AA=G;DP=130     GT:GQ:DP        0|0:100:34      1|0:100:21      0|1:100:76
+9      128553407       rs1005918       G       T       .       PASS    AA=G;DP=136     GT:GQ:DP        0|0:100:34      1|0:100:21      0|1:100:79
+19     57873160        rs34377664      G       A       .       PASS    AA=a;DP=134     GT:GQ:DP        0|0:100:34      1|0:100:21      0|1:100:82
+16     77665985        rs16949501      T       G       .       PASS    AA=T;DP=139     GT:GQ:DP        0|0:100:34      1|0:100:21      0|1:100:87
+15     73252521        rs16966780      G       A       .       PASS    AA=G;DP=132     GT:GQ:DP        0|0:100:34      1|0:100:22      0|1:100:36
+10     61581131        rs10821689      C       T       .       PASS    AA=C;DP=159     GT:GQ:DP        0|0:100:34      1|0:100:22      0|1:100:47
+11     91645259        rs10501777      G       A       .       PASS    AA=G;DP=150     GT:GQ:DP        0|0:100:34      1|0:100:22      0|1:100:47
+8      56628995        rs16922038      T       C       .       PASS    AA=C;DP=122     GT:GQ:DP        0|0:100:34      1|0:100:22      0|1:100:67
+1      181290319       rs4652772       G       C       .       PASS    AA=C;DP=123;HM2;HM3     GT:GQ:DP        0|0:100:34      1|0:100:22      0|1:100:68
+11     74532760        rs12293336      A       C       .       PASS    AA=a;DP=113     GT:GQ:DP        0|0:100:34      1|0:100:23      0|1:100:57
+12     25844654        .       G       A       .       PASS    AA=G;DP=118     GT:GQ:DP        0|0:100:34      1|0:100:23      0|1:100:61
+7      17616729        rs10230521      T       G       .       PASS    AA=T;DP=120     GT:GQ:DP        0|0:100:34      1|0:100:23      0|1:100:63
+1      82561380        .       T       C       .       PASS    AA=T;DP=120     GT:GQ:DP        0|0:100:34      1|0:100:23      0|1:100:64
+10     120332900       rs1766248       G       T       .       PASS    AA=G;DP=134     GT:GQ:DP        0|0:100:34      1|0:100:23      0|1:100:78
+7      134603697       .       G       A       .       PASS    AA=G;DP=145     GT:GQ:DP        0|0:100:34      1|0:100:23      0|1:100:90
+14     99578494        .       C       G       .       PASS    AA=C;DP=137     GT:GQ:DP        0|0:100:34      1|0:100:24      0|1:100:38
+16     82978416        rs7198847       C       T       .       PASS    AA=C;DP=125     GT:GQ:DP        0|0:100:34      1|0:100:24      0|1:100:55
+6      52507206        rs4715305       C       A       .       PASS    AA=C;DP=118     GT:GQ:DP        0|0:100:34      1|0:100:24      0|1:100:60
+10     68395710        .       T       C       .       PASS    AA=T;DP=120     GT:GQ:DP        0|0:100:34      1|0:100:24      0|1:100:62
+4      26849840        .       T       C       .       PASS    AA=T;DP=126     GT:GQ:DP        0|0:100:34      1|0:100:24      0|1:100:70
+14     52488666        .       C       T       .       PASS    AA=C;DP=176     GT:GQ:DP        0|0:100:34      1|0:100:24      0|1:100:71
+8      59434154        rs59949325      A       G       .       PASS    AA=A;DP=149     GT:GQ:DP        0|0:100:34      1|0:100:24      0|1:100:90
+16     26993533        rs11640212      T       C       .       PASS    AA=T;DP=131     GT:GQ:DP        0|0:100:34      1|0:100:25      0|1:100:71
+6      136982269       rs7763893       C       T       .       PASS    AA=T;DP=133     GT:GQ:DP        0|0:100:34      1|0:100:25      0|1:100:74
+8      13721768        .       A       G       .       PASS    AA=A;DP=134     GT:GQ:DP        0|0:100:34      1|0:100:25      0|1:100:75
+12     39304175        rs4768300       T       G       .       PASS    AA=T;DP=143     GT:GQ:DP        0|0:100:34      1|0:100:25      0|1:100:85
+18     19915206        rs10164271      G       T       .       PASS    AA=g;DP=123     GT:GQ:DP        0|0:100:34      1|0:100:26      0|1:100:62
+11     48322843        .       C       T       .       PASS    AA=c;DP=126     GT:GQ:DP        0|0:100:34      1|0:100:26      0|1:100:67
+1      34430009        rs34196207      C       T       .       PASS    AA=C;DP=149     GT:GQ:DP        0|0:100:34      1|0:100:26      0|1:100:88
+22     45743529        .       A       T       .       PASS    AA=A;DP=107     GT:GQ:DP        0|0:100:34      1|0:100:27      0|1:100:34
+15     87675493        rs8032519       C       T       .       PASS    AA=C;DP=145     GT:GQ:DP        0|0:100:34      1|0:100:27      0|1:100:36
+8      12622755        rs7837876       A       T       .       PASS    AA=.;DP=161     GT:GQ:DP        0|0:100:34      1|0:100:27      0|1:100:62
+11     15968054        .       C       G       .       PASS    AA=C;DP=128     GT:GQ:DP        0|0:100:34      1|0:100:27      0|1:100:67
+2      16325213        rs340770        G       T       .       PASS    AA=G;DP=154     GT:GQ:DP        0|0:100:34      1|0:100:27      0|1:100:89
+3      153836127       .       G       A       .       PASS    AA=G;DP=155     GT:GQ:DP        0|0:100:34      1|0:100:27      0|1:100:93
+13     36792441        rs2323475       A       G       .       PASS    AA=A;DP=105     GT:GQ:DP        0|0:100:34      1|0:100:28      0|1:100:42
+9      7514847 rs10124892      C       T       .       PASS    AA=C;DP=144     GT:GQ:DP        0|0:100:34      1|0:100:28      0|1:100:44
+18     13177382        rs7235639       T       C       .       PASS    AA=t;DP=121     GT:GQ:DP        0|0:100:34      1|0:100:28      0|1:100:62
+9      136560630       .       T       C       .       PASS    AA=T;DP=125     GT:GQ:DP        0|0:100:34      1|0:100:28      0|1:100:63
+4      74541188        rs13150293      C       G       .       PASS    AA=G;DP=128     GT:GQ:DP        0|0:100:34      1|0:100:28      0|1:100:67
+5      65410275        rs16894862      A       G       .       PASS    AA=A;DP=133     GT:GQ:DP        0|0:100:34      1|0:100:28      0|1:100:72
+2      64144944        .       T       G       .       PASS    AA=T;DP=135     GT:GQ:DP        0|0:100:34      1|0:100:28      0|1:100:74
+11     6614739 rs2659867       A       T       .       PASS    AA=a;DP=146     GT:GQ:DP        0|0:100:34      1|0:100:28      0|1:100:86
+15     64122891        rs471751        C       T       .       PASS    AA=C;DP=167     GT:GQ:DP        0|0:100:34      1|0:100:29      0|1:100:52
+2      183813732       .       A       C       .       PASS    AA=A;DP=128     GT:GQ:DP        0|0:100:34      1|0:100:29      0|1:100:65
+3      45283672        .       G       A       .       PASS    AA=G;DP=132     GT:GQ:DP        0|0:100:34      1|0:100:29      0|1:100:67
+6      121103931       .       A       C       .       PASS    AA=A;DP=137     GT:GQ:DP        0|0:100:34      1|0:100:29      0|1:100:69
+8      126475393       .       G       C       .       PASS    AA=G;DP=132     GT:GQ:DP        0|0:100:34      1|0:100:29      0|1:100:69
+3      60131296        .       C       T       .       PASS    AA=C;DP=139     GT:GQ:DP        0|0:100:34      1|0:100:29      0|1:100:74
+3      30921593        rs7634350       G       A       .       PASS    AA=A;DP=140     GT:GQ:DP        0|0:100:34      1|0:100:29      0|1:100:78
+2      36664802        rs848617        G       C       .       PASS    AA=g;DP=142     GT:GQ:DP        0|0:100:34      1|0:100:29      0|1:100:81
+8      98165167        rs2513407       C       T       .       PASS    AA=C;DP=147     GT:GQ:DP        0|0:100:34      1|0:100:30      0|1:100:43
+7      26355065        .       T       C       .       PASS    AA=T;DP=131     GT:GQ:DP        0|0:100:34      1|0:100:30      0|1:100:67
+15     32853544        rs16959766      A       C       .       PASS    AA=A;DP=138     GT:GQ:DP        0|0:100:34      1|0:100:30      0|1:100:73
+10     33822624        rs16934579      C       T       .       PASS    AA=C;DP=142     GT:GQ:DP        0|0:100:34      1|0:100:30      0|1:100:79
+2      177529711       rs16864765      C       G       .       PASS    AA=C;DP=137     GT:GQ:DP        0|0:100:34      1|0:100:31      0|1:100:74
+5      149848946       .       G       A       .       PASS    AA=G;DP=142     GT:GQ:DP        0|0:100:34      1|0:100:31      0|1:100:78
+9      106310128       rs1916673       T       C       .       PASS    AA=T;DP=119     GT:GQ:DP        0|0:100:34      1|0:100:32      0|1:100:54
+1      23027818        rs12090415      A       G       .       PASS    AA=A;DP=127;HM2;HM3     GT:GQ:DP        0|0:100:34      1|0:100:32      0|1:100:60
+10     127747286       .       C       T       .       PASS    AA=C;DP=156     GT:GQ:DP        0|0:100:34      1|0:100:32      0|1:100:92
+5      35099469        .       A       G       .       PASS    AA=A;DP=136     GT:GQ:DP        0|0:100:34      1|0:100:34      0|1:100:71
+8      2227930 rs4876173       A       C       .       PASS    AA=C;DP=167     GT:GQ:DP        0|0:100:34      1|0:100:34      0|1:98:55
+9      76416173        rs12115373      G       A       .       PASS    AA=G;DP=125     GT:GQ:DP        0|0:100:34      1|0:100:36      0|1:100:60
+21     18948030        rs28555602      G       A       .       PASS    AA=G;DP=132     GT:GQ:DP        0|0:100:34      1|0:100:37      0|1:100:51
+1      162857749       .       C       A       .       PASS    AA=C;DP=150     GT:GQ:DP        0|0:100:34      1|0:100:37      0|1:100:80
+8      99037046        rs1470957       A       G       .       PASS    AA=G;DP=179     GT:GQ:DP        0|0:100:34      1|0:100:39      0|1:100:106
+22     33170736        rs10483177      T       A       .       PASS    AA=A;DP=156     GT:GQ:DP        0|0:100:34      1|0:100:39      0|1:100:84
+5      86996714        rs34355893      T       C       .       PASS    AA=T;DP=149     GT:GQ:DP        0|0:100:34      1|0:26:20       0|1:100:74
+22     48089266        rs28615243      G       A       .       PASS    AA=G;DP=129     GT:GQ:DP        0|0:100:34      1|0:27:10       0|1:100:83
+11     69494216        rs59390627      C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        0|0:100:34      1|0:32:15       0|1:100:69
+12     120169571       rs2686342       T       A       .       PASS    AA=A;DP=158     GT:GQ:DP        0|0:100:34      1|0:39:17       0|1:100:102
+15     77889664        rs28602858      G       T       .       PASS    AA=G;DP=141     GT:GQ:DP        0|0:100:34      1|0:39:23       0|1:100:43
+10     15102009        rs10796244      C       A       .       PASS    AA=N;DP=97      GT:GQ:DP        0|0:100:34      1|0:40:13       0|1:100:42
+17     9779844 rs16959044      C       T       .       PASS    AA=C;DP=135     GT:GQ:DP        0|0:100:34      1|0:42:13       0|1:100:46
+4      3483052 .       G       A       .       PASS    AA=G;DP=123     GT:GQ:DP        0|0:100:34      1|0:48:18       0|1:100:70
+17     66809710        .       C       G       .       PASS    AA=C;DP=132     GT:GQ:DP        0|0:100:34      1|0:50:23       0|1:100:79
+6      52768704        .       G       A       .       PASS    AA=G;DP=129     GT:GQ:DP        0|0:100:34      1|0:55:16       0|1:100:80
+15     50292036        rs7167590       G       A       .       PASS    AA=G;DP=151     GT:GQ:DP        0|0:100:34      1|0:58:33       0|1:100:82
+2      220606217       rs58125499      G       A       .       PASS    AA=G;DP=146     GT:GQ:DP        0|0:100:34      1|0:65:26       0|1:100:46
+17     34938026        rs7226073       A       T       .       PASS    AA=A;DP=117     GT:GQ:DP        0|0:100:34      1|0:66:15       0|1:100:67
+2      27198988        rs7605526       G       A       .       PASS    AA=G;DP=133     GT:GQ:DP        0|0:100:34      1|0:67:18       0|1:100:79
+7      68087452        rs2904243       A       G       .       PASS    AA=G;DP=106     GT:GQ:DP        0|0:100:34      1|0:68:26       0|1:100:35
+14     79050607        rs59206596      G       A       .       PASS    AA=G;DP=134     GT:GQ:DP        0|0:100:34      1|0:69:27       0|1:100:75
+16     14522688        rs16963767      G       A       .       PASS    AA=A;DP=93      GT:GQ:DP        0|0:100:34      1|0:73:11       0|1:100:48
+10     117730307       rs57174580      C       T       .       PASS    AA=C;DP=131     GT:GQ:DP        0|0:100:34      1|0:75:21       0|1:100:74
+2      99582054        rs3792132       C       G       .       PASS    AA=C;DP=129     GT:GQ:DP        0|0:100:34      1|0:76:9        0|1:100:86
+8      10613874        rs7834573       C       T       .       PASS    AA=C;DP=134     GT:GQ:DP        0|0:100:34      1|0:77:25       0|1:100:75
+1      107977810       rs4914950       C       T       .       PASS    AA=T;DP=131;HM2;HM3     GT:GQ:DP        0|0:100:34      1|0:78:17       0|1:100:80
+6      33124477        rs2567273       G       A       .       PASS    AA=g;DP=135     GT:GQ:DP        0|0:100:34      1|0:79:28       0|1:100:76
+11     47848462        rs61144745      A       G       .       PASS    AA=A;DP=115     GT:GQ:DP        0|0:100:34      1|0:80:15       0|1:100:55
+8      47148046        .       C       T       .       PASS    AA=.;DP=112     GT:GQ:DP        0|0:100:34      1|0:80:15       0|1:100:64
+10     133202211       rs56891447      C       T       .       PASS    AA=C;DP=136     GT:GQ:DP        0|0:100:34      1|0:82:18       0|1:100:84
+1      79320051        rs57547867      C       A       .       PASS    AA=C;DP=112     GT:GQ:DP        0|0:100:34      1|0:83:16       0|1:100:57
+3      7568852 .       A       G       .       PASS    AA=A;DP=131     GT:GQ:DP        0|0:100:34      1|0:85:18       0|1:100:73
+6      131352009       .       T       C       .       PASS    AA=T;DP=126     GT:GQ:DP        0|0:100:34      1|0:86:21       0|1:100:73
+10     7797342 rs58589360      A       G       .       PASS    AA=A;DP=106     GT:GQ:DP        0|0:100:34      1|0:87:15       0|1:100:48
+1      213447609       rs57416025      T       C       .       PASS    AA=T;DP=120     GT:GQ:DP        0|0:100:34      1|0:87:23       0|1:100:62
+5      79122383        rs2287676       C       T       .       PASS    AA=C;DP=130     GT:GQ:DP        0|0:100:34      1|0:89:16       0|1:100:75
+1      116010813       rs4839470       C       T       .       PASS    AA=C;DP=116     GT:GQ:DP        0|0:100:34      1|0:89:21       0|1:100:45
+6      105950097       rs12213874      T       C       .       PASS    AA=T;DP=123     GT:GQ:DP        0|0:100:34      1|0:91:24       0|1:100:64
+4      78501049        rs60994753      G       T       .       PASS    AA=t;DP=135     GT:GQ:DP        0|0:100:34      1|0:92:24       0|1:100:81
+4      84602535        .       T       C       .       PASS    AA=T;DP=130     GT:GQ:DP        0|0:100:34      1|0:93:20       0|1:100:74
+20     20551998        .       C       T       .       PASS    AA=c;DP=129     GT:GQ:DP        0|0:100:34      1|0:93:23       0|1:100:71
+8      43108053        .       C       T       .       PASS    AA=C;DP=129     GT:GQ:DP        0|0:100:34      1|0:94:15       0|1:100:78
+3      29181484        .       G       A       .       PASS    AA=G;DP=128     GT:GQ:DP        0|0:100:34      1|0:94:30       0|1:100:64
+6      167101915       rs733294        G       A       .       PASS    AA=G;DP=112     GT:GQ:DP        0|0:100:34      1|0:95:17       0|1:100:60
+5      6044830 rs12659935      C       T       .       PASS    AA=C;DP=129     GT:GQ:DP        0|0:100:34      1|0:95:27       0|1:100:68
+11     36528573        .       C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        0|0:100:34      1|0:96:21       0|1:100:66
+15     76487551        rs58498078      G       A       .       PASS    AA=A;DP=129     GT:GQ:DP        0|0:100:34      1|0:98:19       0|1:100:75
+11     77738705        rs10899483      G       C       .       PASS    AA=C;DP=133     GT:GQ:DP        0|0:100:34      1|0:99:32       0|1:100:69
+11     77977511        rs7933052       G       T       .       PASS    AA=T;DP=132     GT:GQ:DP        0|0:100:34      1|1:100:35      0|1:100:61
+1      244068986       rs10924352      G       A       .       PASS    AA=G;DP=98      GT:GQ:DP        0|0:100:34      1|1:19:10       0|1:100:54
+12     50493041        rs3741704       G       C       .       PASS    AA=C;DP=87      GT:GQ:DP        0|0:100:34      1|1:19:8        0|1:100:37
+16     53709336        rs4784492       G       T       .       PASS    AA=G;DP=111     GT:GQ:DP        0|0:100:34      1|1:21:14       0|1:100:62
+14     91168239        rs1285609       T       G       .       PASS    AA=T;DP=97      GT:GQ:DP        0|0:100:34      1|1:25:15       0|1:100:43
+1      18199900        rs1767887       T       G       .       PASS    AA=T;DP=130;HM2;HM3     GT:GQ:DP        0|0:100:34      1|1:40:15       0|1:100:83
+17     10738809        rs1838146       C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        0|0:100:34      1|1:40:16       0|1:100:73
+7      105555722       rs7805237       T       C       .       PASS    AA=t;DP=118     GT:GQ:DP        0|0:100:34      1|1:43:16       0|1:100:70
+22     27983611        rs2744465       G       A       .       PASS    AA=A;DP=123     GT:GQ:DP        0|0:100:34      1|1:43:17       0|1:100:71
+8      30249927        rs2938205       A       G       .       PASS    AA=A;DP=119     GT:GQ:DP        0|0:100:34      1|1:46:18       0|1:100:68
+10     117859884       rs10787620      C       T       .       PASS    AA=c;DP=136     GT:GQ:DP        0|0:100:34      1|1:46:19       0|1:100:80
+6      117381537       rs1761844       G       T       .       PASS    AA=G;DP=139     GT:GQ:DP        0|0:100:34      1|1:48:29       0|1:100:77
+9      18002030        rs1329932       A       G       .       PASS    AA=G;DP=141     GT:GQ:DP        0|0:100:34      1|1:49:19       0|1:100:90
+1      176963373       rs2773080       T       C       .       PASS    AA=T;DP=117;HM2;HM3     GT:GQ:DP        0|0:100:34      1|1:52:19       0|1:100:63
+20     54985209        rs7267545       T       C       .       PASS    AA=T;DP=136     GT:GQ:DP        0|0:100:34      1|1:52:19       0|1:100:81
+8      118260590       rs6469680       C       T       .       PASS    AA=T;DP=133     GT:GQ:DP        0|0:100:34      1|1:52:20       0|1:100:83
+9      38030828        rs7042681       T       C       .       PASS    AA=t;DP=132     GT:GQ:DP        0|0:100:34      1|1:55:20       0|1:100:78
+10     5200321 rs11492967      T       C       .       PASS    AA=N;DP=118     GT:GQ:DP        0|0:100:34      1|1:55:21       0|1:100:63
+11     118585687       rs58349744      T       C       .       PASS    AA=T;DP=127     GT:GQ:DP        0|0:100:34      1|1:58:21       0|1:100:74
+6      103171308       rs9499177       G       T       .       PASS    AA=T;DP=132     GT:GQ:DP        0|0:100:34      1|1:58:21       0|1:100:77
+1      155400257       rs1176544       G       A       .       PASS    AA=G;DP=115     GT:GQ:DP        0|0:100:34      1|1:58:22       0|1:100:61
+16     81854991        rs1364312       T       A       .       PASS    AA=t;DP=104     GT:GQ:DP        0|0:100:34      1|1:5:11        0|1:100:37
+18     51851792        rs2588490       A       G       .       PASS    AA=A;DP=112     GT:GQ:DP        0|0:100:34      1|1:61:22       0|1:100:43
+6      56219929        rs3857615       T       C       .       PASS    AA=T;DP=148     GT:GQ:DP        0|0:100:34      1|1:61:23       0|1:100:49
+5      102446160       rs257308        A       C       .       PASS    AA=C;DP=117     GT:GQ:DP        0|0:100:34      1|1:61:23       0|1:100:63
+1      181033129       rs6666879       T       C       .       PASS    AA=C;DP=141;HM2 GT:GQ:DP        0|0:100:34      1|1:67:26       0|1:100:80
+7      137327602       rs12668622      C       T       .       PASS    AA=C;DP=136     GT:GQ:DP        0|0:100:34      1|1:73:27       0|1:100:74
+12     22945102        rs2466870       G       C       .       PASS    AA=C;DP=126     GT:GQ:DP        0|0:100:34      1|1:79:30       0|1:100:64
+8      57448579        rs9298544       G       A       .       PASS    AA=A;DP=160     GT:GQ:DP        0|0:100:34      1|1:88:32       0|1:100:53
+6      111497037       rs6935864       A       C       .       PASS    AA=A;DP=120     GT:GQ:DP        0|0:100:35      0|1:100:14      0|0:100:72
+6      150249967       rs7769118       G       A       .       PASS    AA=G;DP=117     GT:GQ:DP        0|0:100:35      0|1:100:14      0|0:100:73
+3      135172690       rs56719814      C       T       .       PASS    AA=c;DP=131     GT:GQ:DP        0|0:100:35      0|1:100:14      0|0:100:77
+10     81887223        rs11201844      A       G       .       PASS    AA=.;DP=125     GT:GQ:DP        0|0:100:35      0|1:100:15      0|0:100:73
+18     32463391        .       C       G       .       PASS    AA=C;DP=123     GT:GQ:DP        0|0:100:35      0|1:100:15      0|0:100:74
+20     57092339        .       G       A       .       PASS    AA=G;DP=129     GT:GQ:DP        0|0:100:35      0|1:100:15      0|0:100:77
+11     29800900        .       G       C       .       PASS    AA=G;DP=116     GT:GQ:DP        0|0:100:35      0|1:100:16      0|0:100:69
+9      139723391       .       G       A       .       PASS    AA=G;DP=138     GT:GQ:DP        0|0:100:35      0|1:100:16      0|0:100:89
+6      74315895        .       T       C       .       PASS    AA=T;DP=109     GT:GQ:DP        0|0:100:35      0|1:100:17      0|0:100:59
+16     77019613        .       T       C       .       PASS    AA=T;DP=116     GT:GQ:DP        0|0:100:35      0|1:100:17      0|0:100:65
+22     18352115        rs58404178      C       T       .       PASS    AA=C;DP=159     GT:GQ:DP        0|0:100:35      0|1:100:17      0|0:100:67
+9      131060252       rs7849837       G       A       .       PASS    AA=A;DP=118     GT:GQ:DP        0|0:100:35      0|1:100:17      0|0:100:67
+7      157562827       .       C       T       .       PASS    AA=C;DP=126     GT:GQ:DP        0|0:100:35      0|1:100:17      0|0:100:75
+2      96862208        rs9973492       T       A       .       PASS    AA=A;DP=114     GT:GQ:DP        0|0:100:35      0|1:100:18      0|0:100:60
+12     130618619       .       C       T       .       PASS    AA=c;DP=131     GT:GQ:DP        0|0:100:35      0|1:100:18      0|0:100:75
+5      104262271       rs56055392      C       T       .       PASS    AA=c;DP=125     GT:GQ:DP        0|0:100:35      0|1:100:18      0|0:100:76
+2      4876435 .       C       T       .       PASS    AA=c;DP=132     GT:GQ:DP        0|0:100:35      0|1:100:18      0|0:100:81
+5      73879798        rs365729        A       G       .       PASS    AA=G;DP=136     GT:GQ:DP        0|0:100:35      0|1:100:18      0|0:100:83
+12     12130057        rs7959836       A       G       .       PASS    AA=G;DP=139     GT:GQ:DP        0|0:100:35      0|1:100:18      0|0:100:87
+22     21221985        .       G       A       .       PASS    AA=G;DP=151     GT:GQ:DP        0|0:100:35      0|1:100:19      0|0:100:49
+18     64191579        rs17078980      G       A       .       PASS    AA=A;DP=108     GT:GQ:DP        0|0:100:35      0|1:100:19      0|0:100:54
+20     55205989        .       A       G       .       PASS    AA=A;DP=127     GT:GQ:DP        0|0:100:35      0|1:100:19      0|0:100:75
+18     65569452        rs12606050      C       T       .       PASS    AA=T;DP=103     GT:GQ:DP        0|0:100:35      0|1:100:20      0|0:100:47
+5      157258917       rs6894450       G       C       .       PASS    AA=a;DP=147     GT:GQ:DP        0|0:100:35      0|1:100:20      0|0:100:49
+1      112264846       rs4838926       G       C       .       PASS    AA=C;DP=134;HM2 GT:GQ:DP        0|0:100:35      0|1:100:20      0|0:100:77
+11     119596830       rs921574        A       T       .       PASS    AA=A;DP=133     GT:GQ:DP        0|0:100:35      0|1:100:20      0|0:100:78
+6      13378358        rs4605869       T       C       .       PASS    AA=T;DP=132     GT:GQ:DP        0|0:100:35      0|1:100:20      0|0:100:80
+5      148176677       rs55922930      T       C       .       PASS    AA=T;DP=136     GT:GQ:DP        0|0:100:35      0|1:100:20      0|0:100:82
+16     58692709        rs1862759       T       G       .       PASS    AA=T;DP=105     GT:GQ:DP        0|0:100:35      0|1:100:21      0|0:100:47
+17     60656741        .       G       A       .       PASS    AA=G;DP=146     GT:GQ:DP        0|0:100:35      0|1:100:21      0|0:100:48
+2      232244662       rs34324299      G       A       .       PASS    AA=g;DP=110     GT:GQ:DP        0|0:100:35      0|1:100:21      0|0:100:54
+6      14210288        .       A       G       .       PASS    AA=G;DP=114     GT:GQ:DP        0|0:100:35      0|1:100:21      0|0:100:61
+5      24403332        .       G       T       .       PASS    AA=G;DP=128     GT:GQ:DP        0|0:100:35      0|1:100:21      0|0:100:73
+10     16272890        rs1578267       C       T       .       PASS    AA=c;DP=128     GT:GQ:DP        0|0:100:35      0|1:100:21      0|0:100:75
+19     34062855        rs57987434      T       C       .       PASS    AA=T;DP=137     GT:GQ:DP        0|0:100:35      0|1:100:21      0|0:100:80
+2      39648193        .       C       T       .       PASS    AA=C;DP=140     GT:GQ:DP        0|0:100:35      0|1:100:21      0|0:100:81
+14     44228289        rs17115413      G       A       .       PASS    AA=G;DP=103     GT:GQ:DP        0|0:100:35      0|1:100:22      0|0:100:46
+7      116385971       rs6466595       A       G       .       PASS    AA=a;DP=121     GT:GQ:DP        0|0:100:35      0|1:100:22      0|0:100:63
+14     72928498        .       T       C       .       PASS    AA=t;DP=126     GT:GQ:DP        0|0:100:35      0|1:100:22      0|0:100:66
+14     23462822        .       C       T       .       PASS    AA=C;DP=135     GT:GQ:DP        0|0:100:35      0|1:100:23      0|0:100:34
+2      62071929        rs10191201      G       A       .       PASS    AA=A;DP=131     GT:GQ:DP        0|0:100:35      0|1:100:23      0|0:100:38
+13     65669835        .       A       C       .       PASS    AA=A;DP=108     GT:GQ:DP        0|0:100:35      0|1:100:23      0|0:100:49
+8      127195849       rs7010853       G       A       .       PASS    AA=G;DP=135     GT:GQ:DP        0|0:100:35      0|1:100:23      0|0:100:75
+4      159330127       .       A       G       .       PASS    AA=A;DP=132     GT:GQ:DP        0|0:100:35      0|1:100:23      0|0:100:78
+6      13950482        rs6911899       C       A       .       PASS    AA=A;DP=142     GT:GQ:DP        0|0:100:35      0|1:100:23      0|0:100:83
+3      136362444       rs1501206       A       C       .       PASS    AA=C;DP=143     GT:GQ:DP        0|0:100:35      0|1:100:23      0|0:100:86
+20     20346210        .       A       G       .       PASS    AA=A;DP=144     GT:GQ:DP        0|0:100:35      0|1:100:23      0|0:100:87
+7      107613249       rs3819743       G       A       .       PASS    AA=A;DP=147     GT:GQ:DP        0|0:100:35      0|1:100:23      0|0:100:90
+2      174632924       .       C       T       .       PASS    AA=C;DP=127     GT:GQ:DP        0|0:100:35      0|1:100:24      0|0:100:68
+10     95250013        .       G       A       .       PASS    AA=G;DP=126     GT:GQ:DP        0|0:100:35      0|1:100:24      0|0:100:69
+10     111747116       rs17126936      C       T       .       PASS    AA=T;DP=134     GT:GQ:DP        0|0:100:35      0|1:100:24      0|0:100:75
+1      181812684       rs12753665      G       A       .       PASS    AA=G;DP=136;HM2;HM3     GT:GQ:DP        0|0:100:35      0|1:100:24      0|0:100:76
+7      29476842        rs60995862      A       C       .       PASS    AA=A;DP=136     GT:GQ:DP        0|0:100:35      0|1:100:24      0|0:100:76
+5      139251039       rs6893652       G       A       .       PASS    AA=A;DP=156     GT:GQ:DP        0|0:100:35      0|1:100:24      0|0:100:99
+10     30120744        .       A       G       .       PASS    AA=A;DP=166     GT:GQ:DP        0|0:100:35      0|1:100:25      0|0:100:104
+11     7813403 .       T       C       .       PASS    AA=T;DP=113     GT:GQ:DP        0|0:100:35      0|1:100:25      0|0:100:53
+2      123076631       rs1946887       T       C       .       PASS    AA=C;DP=127     GT:GQ:DP        0|0:100:35      0|1:100:25      0|0:100:66
+2      217834481       rs10490757      T       C       .       PASS    AA=T;DP=127     GT:GQ:DP        0|0:100:35      0|1:100:25      0|0:100:67
+4      73113657        rs6817386       G       T       .       PASS    AA=.;DP=128     GT:GQ:DP        0|0:100:35      0|1:100:25      0|0:100:68
+15     51906711        rs766615        C       T       .       PASS    AA=c;DP=132     GT:GQ:DP        0|0:100:35      0|1:100:25      0|0:100:74
+1      225073805       rs6674701       A       G       .       PASS    AA=G;DP=147;HM2;HM3     GT:GQ:DP        0|0:100:35      0|1:100:25      0|0:100:86
+10     116587886       .       G       A       .       PASS    AA=G;DP=150     GT:GQ:DP        0|0:100:35      0|1:100:25      0|0:100:91
+11     3643624 .       A       G       .       PASS    AA=A;DP=163     GT:GQ:DP        0|0:100:35      0|1:100:26      0|0:100:49
+5      137624080       .       G       T       .       PASS    AA=G;DP=118     GT:GQ:DP        0|0:100:35      0|1:100:26      0|0:100:56
+11     5361530 rs2647552       G       C       .       PASS    AA=G;DP=119     GT:GQ:DP        0|0:100:35      0|1:100:26      0|0:100:64
+5      144087472       rs7737468       A       T       .       PASS    AA=T;DP=134     GT:GQ:DP        0|0:100:35      0|1:100:26      0|0:100:72
+4      93235694        .       C       T       .       PASS    AA=C;DP=138     GT:GQ:DP        0|0:100:35      0|1:100:26      0|0:100:76
+15     66518242        .       C       A       .       PASS    AA=C;DP=139     GT:GQ:DP        0|0:100:35      0|1:100:26      0|0:100:79
+6      75506423        rs2502457       G       C       .       PASS    AA=C;DP=150     GT:GQ:DP        0|0:100:35      0|1:100:27      0|0:100:36
+12     123200631       .       G       T       .       PASS    AA=G;DP=154     GT:GQ:DP        0|0:100:35      0|1:100:27      0|0:100:48
+4      13836842        rs28450274      A       G       .       PASS    AA=A;DP=111     GT:GQ:DP        0|0:100:35      0|1:100:27      0|0:100:49
+15     95273190        .       T       C       .       PASS    AA=T;DP=129     GT:GQ:DP        0|0:100:35      0|1:100:27      0|0:100:69
+16     82161462        rs8056708       C       G       .       PASS    AA=C;DP=132     GT:GQ:DP        0|0:100:35      0|1:100:27      0|0:100:73
+18     61183804        rs35664665      G       A       .       PASS    AA=G;DP=143     GT:GQ:DP        0|0:100:35      0|1:100:27      0|0:100:80
+20     54675942        rs13433315      T       C       .       PASS    AA=t;DP=155     GT:GQ:DP        0|0:100:35      0|1:100:27      0|0:100:85
+5      110925757       .       C       T       .       PASS    AA=T;DP=151     GT:GQ:DP        0|0:100:35      0|1:100:27      0|0:100:89
+1      61386586        rs17121688      A       G       .       PASS    AA=A;DP=148;HM2;HM3     GT:GQ:DP        0|0:100:35      0|1:100:28      0|0:100:41
+15     59149739        rs1568717       C       A       .       PASS    AA=C;DP=158     GT:GQ:DP        0|0:100:35      0|1:100:28      0|0:100:45
+15     88612573        rs16944104      C       T       .       PASS    AA=C;DP=169     GT:GQ:DP        0|0:100:35      0|1:100:28      0|0:100:54
+9      80473615        rs10867231      G       A       .       PASS    AA=G;DP=118     GT:GQ:DP        0|0:100:35      0|1:100:28      0|0:100:54
+2      160380700       rs7563956       G       A       .       PASS    AA=g;DP=140     GT:GQ:DP        0|0:100:35      0|1:100:28      0|0:100:64
+16     34411696        .       T       C       .       PASS    AA=.;DP=132     GT:GQ:DP        0|0:100:35      0|1:100:28      0|0:100:68
+7      86139774        rs7790582       C       T       .       PASS    AA=C;DP=138     GT:GQ:DP        0|0:100:35      0|1:100:28      0|0:100:76
+5      149577148       rs980272        C       T       .       PASS    AA=C;DP=158     GT:GQ:DP        0|0:100:35      0|1:100:28      0|0:100:96
+5      142817416       rs55880290      G       C       .       PASS    AA=G;DP=168     GT:GQ:DP        0|0:100:35      0|1:100:29      0|0:100:102
+11     79673890        rs6591883       T       C       .       PASS    AA=T;DP=148     GT:GQ:DP        0|0:100:35      0|1:100:29      0|0:100:41
+9      14028347        .       T       C       .       PASS    AA=T;DP=137     GT:GQ:DP        0|0:100:35      0|1:100:29      0|0:100:74
+12     90692740        rs17019604      T       C       .       PASS    AA=T;DP=141     GT:GQ:DP        0|0:100:35      0|1:100:29      0|0:100:79
+6      29941646        .       G       A       .       PASS    AA=.;DP=125     GT:GQ:DP        0|0:100:35      0|1:100:30      0|0:100:60
+2      88590361        .       A       G       .       PASS    AA=G;DP=129     GT:GQ:DP        0|0:100:35      0|1:100:31      0|0:100:64
+6      114130809       rs9400660       G       A       .       PASS    AA=G;DP=146     GT:GQ:DP        0|0:100:35      0|1:100:31      0|0:100:82
+18     10843771        rs3898148       G       A       .       PASS    AA=A;DP=150     GT:GQ:DP        0|0:100:35      0|1:100:31      0|0:100:83
+1      99865174        .       G       A       .       PASS    AA=-;DP=123     GT:GQ:DP        0|0:100:35      0|1:100:32      0|0:100:56
+5      75122220        rs55727607      G       A       .       PASS    AA=A;DP=136     GT:GQ:DP        0|0:100:35      0|1:100:32      0|0:100:68
+2      20396112        .       T       G       .       PASS    AA=T;DP=141     GT:GQ:DP        0|0:100:35      0|1:100:32      0|0:100:73
+13     112042900       .       G       A       .       PASS    AA=G;DP=141     GT:GQ:DP        0|0:100:35      0|1:100:32      0|0:100:74
+6      11623349        rs6905551       T       C       .       PASS    AA=T;DP=140     GT:GQ:DP        0|0:100:35      0|1:100:32      0|0:100:74
+17     68695292        .       C       T       .       PASS    AA=C;DP=155     GT:GQ:DP        0|0:100:35      0|1:100:32      0|0:100:76
+17     5945775 rs10852875      A       G       .       PASS    AA=A;DP=149     GT:GQ:DP        0|0:100:35      0|1:100:32      0|0:100:82
+15     56054454        rs7181106       A       G       .       PASS    AA=A;DP=151     GT:GQ:DP        0|0:100:35      0|1:100:32      0|0:81:28
+5      155010113       rs7736866       G       T       .       PASS    AA=G;DP=137     GT:GQ:DP        0|0:100:35      0|1:100:32      0|0:90:30
+5      61340462        rs918616        C       T       .       PASS    AA=C;DP=160     GT:GQ:DP        0|0:100:35      0|1:100:33      0|0:100:52
+2      15030431        rs58780889      G       A       .       PASS    AA=G;DP=149     GT:GQ:DP        0|0:100:35      0|1:100:33      0|0:100:82
+14     70025356        .       T       C       .       PASS    AA=T;DP=170     GT:GQ:DP        0|0:100:35      0|1:100:34      0|0:100:60
+11     105241950       rs10791776      G       A       .       PASS    AA=G;DP=150     GT:GQ:DP        0|0:100:35      0|1:100:34      0|0:100:80
+2      53507963        .       G       A       .       PASS    AA=G;DP=159     GT:GQ:DP        0|0:100:35      0|1:100:35      0|0:100:41
+5      149488848       .       C       T       .       PASS    AA=C;DP=153     GT:GQ:DP        0|0:100:35      0|1:100:36      0|0:100:83
+13     48203638        rs7320539       C       T       .       PASS    AA=T;DP=169     GT:GQ:DP        0|0:100:35      0|1:100:37      0|0:100:53
+7      92735448        rs4729077       C       G       .       PASS    AA=C;DP=154     GT:GQ:DP        0|0:100:35      0|1:100:38      0|0:100:83
+16     53731585        .       A       G       .       PASS    AA=A;DP=167     GT:GQ:DP        0|0:100:35      0|1:100:40      0|0:100:47
+10     63480458        rs713240        C       T       .       PASS    AA=C;DP=160     GT:GQ:DP        0|0:100:35      0|1:100:40      0|0:100:68
+8      55307471        .       A       G       .       PASS    AA=A;DP=141     GT:GQ:DP        0|0:100:35      0|1:100:41      0|0:100:67
+5      172792035       .       T       C       .       PASS    AA=t;DP=177     GT:GQ:DP        0|0:100:35      0|1:100:45      0|0:100:45
+5      39782716        .       C       T       .       PASS    AA=C;DP=168     GT:GQ:DP        0|0:100:35      0|1:100:50      0|0:100:82
+5      24298869        rs60875923      G       A       .       PASS    AA=G;DP=95      GT:GQ:DP        0|0:100:35      1|0:100:13      0|1:100:42
+11     123933680       rs11219703      C       A       .       PASS    AA=C;DP=112     GT:GQ:DP        0|0:100:35      1|0:100:14      0|1:100:62
+7      28754017        .       A       G       .       PASS    AA=A;DP=117     GT:GQ:DP        0|0:100:35      1|0:100:14      0|1:100:70
+12     103425403       rs12303997      G       A       .       PASS    AA=G;DP=127     GT:GQ:DP        0|0:100:35      1|0:100:14      0|1:100:74
+11     133739396       rs60460137      G       A       .       PASS    AA=g;DP=121     GT:GQ:DP        0|0:100:35      1|0:100:15      0|1:100:72
+22     24059191        rs12158905      T       C       .       PASS    AA=t;DP=126     GT:GQ:DP        0|0:100:35      1|0:100:15      0|1:100:79
+5      176803792       rs439120        G       T       .       PASS    AA=G;DP=140     GT:GQ:DP        0|0:100:35      1|0:100:15      0|1:100:91
+7      138881426       rs57624514      C       G       .       PASS    AA=C;DP=110     GT:GQ:DP        0|0:100:35      1|0:100:16      0|1:100:59
+16     74019247        rs11862684      T       G       .       PASS    AA=N;DP=110     GT:GQ:DP        0|0:100:35      1|0:100:17      0|1:100:58
+1      54153994        rs12063777      C       T       .       PASS    AA=T;DP=128;HM2;HM3     GT:GQ:DP        0|0:100:35      1|0:100:17      0|1:100:78
+4      2886560 rs4963  C       G       .       PASS    AA=C;DP=133     GT:GQ:DP        0|0:100:35      1|0:100:17      0|1:100:79
+12     93716059        rs60162970      A       G       .       PASS    AA=A;DP=132     GT:GQ:DP        0|0:100:35      1|0:100:18      0|1:100:79
+14     62169424        rs12893110      T       C       .       PASS    AA=T;DP=125     GT:GQ:DP        0|0:100:35      1|0:100:19      0|1:100:71
+5      11046824        rs61751684      T       A       .       PASS    AA=T;DP=124     GT:GQ:DP        0|0:100:35      1|0:100:19      0|1:100:73
+7      152944881       .       G       A       .       PASS    AA=G;DP=135     GT:GQ:DP        0|0:100:35      1|0:100:19      0|1:100:81
+8      43515306        rs7840557       T       C       .       PASS    AA=N;DP=138     GT:GQ:DP        0|0:100:35      1|0:100:19      0|1:100:83
+2      66106479        rs1351858       T       C       .       PASS    AA=T;DP=142     GT:GQ:DP        0|0:100:35      1|0:100:19      0|1:100:90
+2      105476903       rs10167517      A       G       .       PASS    AA=G;DP=140     GT:GQ:DP        0|0:100:35      1|0:100:20      0|1:100:44
+5      1608825 rs2963266       A       C       .       PASS    AA=A;DP=106     GT:GQ:DP        0|0:100:35      1|0:100:20      0|1:100:52
+6      129746680       .       G       A       .       PASS    AA=G;DP=121     GT:GQ:DP        0|0:100:35      1|0:100:20      0|1:100:65
+15     88157006        rs28409374      C       T       .       PASS    AA=c;DP=128     GT:GQ:DP        0|0:100:35      1|0:100:20      0|1:100:75
+19     61968716        .       G       A       .       PASS    AA=G;DP=129     GT:GQ:DP        0|0:100:35      1|0:100:20      0|1:100:75
+1      36692199        rs12092436      T       C       .       PASS    AA=T;DP=142;HM2 GT:GQ:DP        0|0:100:35      1|0:100:20      0|1:100:84
+7      32648269        rs4720071       T       C       .       PASS    AA=T;DP=114     GT:GQ:DP        0|0:100:35      1|0:100:21      0|1:100:47
+1      205357268       rs4844571       C       A       .       PASS    AA=A;DP=119     GT:GQ:DP        0|0:100:35      1|0:100:21      0|1:100:63
+4      4534941 .       T       C       .       PASS    AA=T;DP=117     GT:GQ:DP        0|0:100:35      1|0:100:21      0|1:100:65
+16     77330350        .       C       T       .       PASS    AA=C;DP=130     GT:GQ:DP        0|0:100:35      1|0:100:21      0|1:100:71
+2      211911612       .       T       C       .       PASS    AA=T;DP=113     GT:GQ:DP        0|0:100:35      1|0:100:22      0|1:100:53
+2      232436681       rs2067564       T       C       .       PASS    AA=C;DP=155     GT:GQ:DP        0|0:100:35      1|0:100:22      0|1:100:56
+17     69682677        rs7218405       T       C       .       PASS    AA=T;DP=170     GT:GQ:DP        0|0:100:35      1|0:100:22      0|1:100:65
+5      33941183        .       G       A       .       PASS    AA=G;DP=122     GT:GQ:DP        0|0:100:35      1|0:100:22      0|1:100:65
+1      207319054       rs59720805      T       C       .       PASS    AA=T;DP=129     GT:GQ:DP        0|0:100:35      1|0:100:22      0|1:100:73
+1      77040803        rs12757024      A       G       .       PASS    AA=A;DP=132;HM2;HM3     GT:GQ:DP        0|0:100:35      1|0:100:22      0|1:100:74
+5      2392106 rs58681278      G       C       .       PASS    AA=G;DP=135     GT:GQ:DP        0|0:100:35      1|0:100:22      0|1:100:76
+18     33584768        .       C       T       .       PASS    AA=C;DP=135     GT:GQ:DP        0|0:100:35      1|0:100:22      0|1:100:77
+11     121742257       .       G       A       .       PASS    AA=G;DP=116     GT:GQ:DP        0|0:100:35      1|0:100:23      0|1:100:46
+12     123710406       rs701078        C       T       .       PASS    AA=C;DP=149     GT:GQ:DP        0|0:100:35      1|0:100:23      0|1:100:47
+4      144695463       .       A       G       .       PASS    AA=A;DP=162     GT:GQ:DP        0|0:100:35      1|0:100:23      0|1:100:51
+1      148923635       rs11204695      T       G       .       PASS    AA=T;DP=114;HM3 GT:GQ:DP        0|0:100:35      1|0:100:23      0|1:100:57
+7      29918317        rs4719995       T       A       .       PASS    AA=T;DP=126     GT:GQ:DP        0|0:100:35      1|0:100:23      0|1:100:69
+5      41640384        rs16900140      T       A       .       PASS    AA=T;DP=127     GT:GQ:DP        0|0:100:35      1|0:100:23      0|1:100:70
+12     9640033 rs2058425       A       G       .       PASS    AA=.;DP=129     GT:GQ:DP        0|0:100:35      1|0:100:23      0|1:100:72
+20     53008002        rs6023743       A       G       .       PASS    AA=G;DP=130     GT:GQ:DP        0|0:100:35      1|0:100:23      0|1:100:74
+1      116497566       rs60162264      G       A       .       PASS    AA=G;DP=137     GT:GQ:DP        0|0:100:35      1|0:100:23      0|1:100:79
+19     16004798        .       G       A       .       PASS    AA=g;DP=106     GT:GQ:DP        0|0:100:35      1|0:100:24      0|1:100:36
+10     50530235        rs10857521      C       G       .       PASS    AA=C;DP=155     GT:GQ:DP        0|0:100:35      1|0:100:24      0|1:100:47
+3      137014503       .       A       T       .       PASS    AA=A;DP=120     GT:GQ:DP        0|0:100:35      1|0:100:24      0|1:100:55
+1      11780112        rs6541005       A       T       .       PASS    AA=A;DP=117     GT:GQ:DP        0|0:100:35      1|0:100:24      0|1:100:56
+10     17080243        rs6602171       G       A       .       PASS    AA=A;DP=131     GT:GQ:DP        0|0:100:35      1|0:100:24      0|1:100:69
+12     1433367 .       G       A       .       PASS    AA=G;DP=135     GT:GQ:DP        0|0:100:35      1|0:100:24      0|1:100:78
+9      127321324       rs12351538      A       G       .       PASS    AA=G;DP=138     GT:GQ:DP        0|0:100:35      1|0:100:24      0|1:100:78
+18     55986663        .       A       G       .       PASS    AA=A;DP=141     GT:GQ:DP        0|0:100:35      1|0:100:24      0|1:100:82
+2      170718978       rs59964151      G       A       .       PASS    AA=g;DP=146     GT:GQ:DP        0|0:100:35      1|0:100:25      0|1:100:45
+2      223940640       rs990297        C       A       .       PASS    AA=C;DP=126     GT:GQ:DP        0|0:100:35      1|0:100:25      0|1:100:53
+9      125157379       rs1891632       G       A       .       PASS    AA=G;DP=160     GT:GQ:DP        0|0:100:35      1|0:100:25      0|1:100:54
+6      15573472        rs35801290      C       T       .       PASS    AA=C;DP=132     GT:GQ:DP        0|0:100:35      1|0:100:25      0|1:100:73
+1      180919286       rs12129643      C       A       .       PASS    AA=C;DP=140;HM2;HM3     GT:GQ:DP        0|0:100:35      1|0:100:25      0|1:100:81
+2      108952869       rs11691107      C       T       .       PASS    AA=C;DP=144     GT:GQ:DP        0|0:100:35      1|0:100:25      0|1:100:85
+9      119439765       rs7031659       A       T       .       PASS    AA=A;DP=122     GT:GQ:DP        0|0:100:35      1|0:100:26      0|1:100:58
+4      22533197        .       C       T       .       PASS    AA=C;DP=126     GT:GQ:DP        0|0:100:35      1|0:100:26      0|1:100:66
+7      134285500       .       G       A       .       PASS    AA=G;DP=139     GT:GQ:DP        0|0:100:35      1|0:100:26      0|1:100:76
+2      108185348       rs9631035       C       T       .       PASS    AA=c;DP=140     GT:GQ:DP        0|0:100:35      1|0:100:26      0|1:100:81
+3      42442417        .       G       T       .       PASS    AA=G;DP=133     GT:GQ:DP        0|0:100:35      1|0:100:27      0|1:100:75
+4      188012707       rs60226958      T       C       .       PASS    AA=T;DP=141     GT:GQ:DP        0|0:100:35      1|0:100:27      0|1:100:78
+8      11708555        .       A       G       .       PASS    AA=A;DP=147     GT:GQ:DP        0|0:100:35      1|0:100:27      0|1:100:83
+10     29094615        rs1265786       G       A       .       PASS    AA=G;DP=156     GT:GQ:DP        0|0:100:35      1|0:100:27      0|1:100:96
+10     7011461 rs1832635       G       A       .       PASS    AA=G;DP=156     GT:GQ:DP        0|0:100:35      1|0:100:28      0|1:100:41
+1      45214704        rs12073834      C       A       .       PASS    AA=C;DP=112     GT:GQ:DP        0|0:100:35      1|0:100:28      0|1:100:48
+10     31195037        rs61681218      A       G       .       PASS    AA=A;DP=149     GT:GQ:DP        0|0:100:35      1|0:100:28      0|1:100:58
+14     30958587        .       G       C       .       PASS    AA=G;DP=130     GT:GQ:DP        0|0:100:35      1|0:100:28      0|1:100:68
+4      123848546       rs10001016      T       A       .       PASS    AA=T;DP=133     GT:GQ:DP        0|0:100:35      1|0:100:28      0|1:100:70
+4      165085345       rs11100532      G       T       .       PASS    AA=G;DP=136     GT:GQ:DP        0|0:100:35      1|0:100:28      0|1:100:74
+10     3961588 rs7083363       C       T       .       PASS    AA=C;DP=137     GT:GQ:DP        0|0:100:35      1|0:100:28      0|1:100:78
+4      10709128        rs4613559       C       T       .       PASS    AA=C;DP=143     GT:GQ:DP        0|0:100:35      1|0:100:28      0|1:100:79
+1      173820023       .       G       A       .       PASS    AA=G;DP=151     GT:GQ:DP        0|0:100:35      1|0:100:28      0|1:100:80
+5      155061807       .       T       C       .       PASS    AA=T;DP=169     GT:GQ:DP        0|0:100:35      1|0:100:29      0|1:100:62
+7      41534735        rs60098953      G       A       .       PASS    AA=G;DP=137     GT:GQ:DP        0|0:100:35      1|0:100:29      0|1:100:72
+8      128555483       .       G       A       .       PASS    AA=G;DP=163     GT:GQ:DP        0|0:100:35      1|0:100:29      0|1:100:95
+3      152995328       rs56044518      A       G       .       PASS    AA=a;DP=125     GT:GQ:DP        0|0:100:35      1|0:100:30      0|1:100:60
+3      11403261        .       T       C       .       PASS    AA=T;DP=128     GT:GQ:DP        0|0:100:35      1|0:100:30      0|1:100:63
+6      43803653        rs9472114       G       A       .       PASS    AA=G;DP=134     GT:GQ:DP        0|0:100:35      1|0:100:30      0|1:100:70
+11     58433801        rs11229690      G       A       .       PASS    AA=g;DP=142     GT:GQ:DP        0|0:100:35      1|0:100:30      0|1:100:78
+5      148329401       .       T       C       .       PASS    AA=T;DP=146     GT:GQ:DP        0|0:100:35      1|0:100:30      0|1:100:83
+1      240016605       .       T       G       .       PASS    AA=t;DP=148     GT:GQ:DP        0|0:100:35      1|0:100:31      0|1:100:41
+20     5700148 .       T       C       .       PASS    AA=t;DP=153     GT:GQ:DP        0|0:100:35      1|0:100:31      0|1:100:45
+19     42305374        .       A       T       .       PASS    AA=T;DP=114     GT:GQ:DP        0|0:100:35      1|0:100:31      0|1:100:50
+19     40252804        .       A       G       .       PASS    AA=A;DP=136     GT:GQ:DP        0|0:100:35      1|0:100:31      0|1:100:69
+7      11251054        .       T       G       .       PASS    AA=T;DP=140     GT:GQ:DP        0|0:100:35      1|0:100:31      0|1:100:73
+6      118533729       rs4565341       G       A       .       PASS    AA=G;DP=127     GT:GQ:DP        0|0:100:35      1|0:100:32      0|1:100:45
+10     25971382        rs10828840      T       C       .       PASS    AA=T;DP=139     GT:GQ:DP        0|0:100:35      1|0:100:32      0|1:100:74
+12     56129222        .       A       G       .       PASS    AA=A;DP=182     GT:GQ:DP        0|0:100:35      1|0:100:33      0|1:100:61
+6      40921871        rs4714393       T       C       .       PASS    AA=C;DP=159     GT:GQ:DP        0|0:100:35      1|0:100:33      0|1:100:92
+3      190922521       rs62279900      T       A       .       PASS    AA=T;DP=158     GT:GQ:DP        0|0:100:35      1|0:100:33      0|1:100:93
+4      87916887        rs28587332      A       G       .       PASS    AA=A;DP=161     GT:GQ:DP        0|0:100:35      1|0:100:34      0|1:100:51
+1      156904618       .       A       G       .       PASS    AA=A;DP=134     GT:GQ:DP        0|0:100:35      1|0:100:34      0|1:100:64
+3      106228899       .       C       T       .       PASS    AA=C;DP=131     GT:GQ:DP        0|0:100:35      1|0:100:34      0|1:100:65
+15     49876480        .       C       G       .       PASS    AA=G;DP=144     GT:GQ:DP        0|0:100:35      1|0:100:34      0|1:100:75
+3      148448221       rs62275292      T       C       .       PASS    AA=T;DP=151     GT:GQ:DP        0|0:100:35      1|0:100:34      0|1:100:87
+1      245653797       rs56710146      C       T       .       PASS    AA=C;DP=165     GT:GQ:DP        0|0:100:35      1|0:100:34      0|1:100:96
+13     102668618       .       G       A       .       PASS    AA=G;DP=138     GT:GQ:DP        0|0:100:35      1|0:100:35      0|1:100:68
+6      13039434        rs9381511       C       T       .       PASS    AA=C;DP=139     GT:GQ:DP        0|0:100:35      1|0:100:35      0|1:100:73
+5      128299128       rs2526196       G       C       .       PASS    AA=G;DP=136     GT:GQ:DP        0|0:100:35      1|0:100:37      0|1:100:64
+2      132802399       .       A       C       .       PASS    AA=A;DP=174     GT:GQ:DP        0|0:100:35      1|0:100:38      0|1:100:94
+3      8502801 rs9879912       C       T       .       PASS    AA=C;DP=141     GT:GQ:DP        0|0:100:35      1|0:100:41      0|1:100:59
+17     21655934        rs1985717       T       A       .       PASS    AA=t;DP=149     GT:GQ:DP        0|0:100:35      1|0:100:49      0|1:100:67
+16     48052674        rs55730016      C       T       .       PASS    AA=T;DP=103     GT:GQ:DP        0|0:100:35      1|0:13:11       0|1:100:57
+9      9172869 .       T       C       .       PASS    AA=T;DP=108     GT:GQ:DP        0|0:100:35      1|0:32:13       0|1:100:59
+5      5607044 rs28776798      G       A       .       PASS    AA=G;DP=142     GT:GQ:DP        0|0:100:35      1|0:44:22       0|1:100:85
+5      178151997       .       A       T       .       PASS    AA=A;DP=142     GT:GQ:DP        0|0:100:35      1|0:45:14       0|1:100:92
+10     43075626        rs1879304       T       C       .       PASS    AA=C;DP=134     GT:GQ:DP        0|0:100:35      1|0:46:12       0|1:100:82
+1      227401892       rs6587345       T       C       .       PASS    AA=C;DP=110     GT:GQ:DP        0|0:100:35      1|0:56:13       0|1:100:62
+4      166146510       .       A       G       .       PASS    AA=A;DP=110     GT:GQ:DP        0|0:100:35      1|0:58:21       0|1:100:54
+21     34839696        rs57216941      G       C       .       PASS    AA=G;DP=134     GT:GQ:DP        0|0:100:35      1|0:60:23       0|1:100:77
+22     16544742        .       G       C       .       PASS    AA=G;DP=117     GT:GQ:DP        0|0:100:35      1|0:65:14       0|1:100:68
+3      33132947        .       A       G       .       PASS    AA=G;DP=106     GT:GQ:DP        0|0:100:35      1|0:65:20       0|1:100:38
+18     55889058        rs7232886       A       G       .       PASS    AA=G;DP=150     GT:GQ:DP        0|0:100:35      1|0:66:25       0|1:100:46
+6      39979922        .       T       C       .       PASS    AA=T;DP=149     GT:GQ:DP        0|0:100:35      1|0:68:22       0|1:100:45
+5      123954998       .       G       C       .       PASS    AA=G;DP=126     GT:GQ:DP        0|0:100:35      1|0:69:22       0|1:100:69
+5      10884871        .       C       T       .       PASS    AA=C;DP=104     GT:GQ:DP        0|0:100:35      1|0:71:20       0|1:100:51
+3      32014477        .       C       A       .       PASS    AA=C;DP=107     GT:GQ:DP        0|0:100:35      1|0:74:17       0|1:100:43
+14     51020843        rs8015813       A       G       .       PASS    AA=A;DP=117     GT:GQ:DP        0|0:100:35      1|0:75:15       0|1:100:69
+10     112467577       .       G       C       .       PASS    AA=G;DP=143     GT:GQ:DP        0|0:100:35      1|0:76:22       0|1:100:84
+13     25411859        .       G       T       .       PASS    AA=G;DP=133     GT:GQ:DP        0|0:100:35      1|0:77:23       0|1:100:73
+13     24363476        rs12019782      T       C       .       PASS    AA=N;DP=134     GT:GQ:DP        0|0:100:35      1|0:78:17       0|1:100:84
+10     116646089       rs60727007      G       A       .       PASS    AA=G;DP=133     GT:GQ:DP        0|0:100:35      1|0:79:20       0|1:100:80
+1      179412152       rs12566430      T       C       .       PASS    AA=T;DP=129;HM2;HM3     GT:GQ:DP        0|0:100:35      1|0:84:22       0|1:100:71
+12     71040938        .       C       T       .       PASS    AA=c;DP=99      GT:GQ:DP        0|0:100:35      1|0:86:16       0|1:100:36
+1      99212196        .       G       C       .       PASS    AA=G;DP=125     GT:GQ:DP        0|0:100:35      1|0:88:20       0|1:100:73
+8      52374774        .       G       A       .       PASS    AA=A;DP=135     GT:GQ:DP        0|0:100:35      1|0:93:24       0|1:100:76
+3      70740297        .       T       C       .       PASS    AA=T;DP=102     GT:GQ:DP        0|0:100:35      1|0:95:13       0|1:100:51
+4      91417150        .       A       G       .       PASS    AA=G;DP=135     GT:GQ:DP        0|0:100:35      1|0:95:22       0|1:100:80
+21     41570149        .       G       A       .       PASS    AA=G;DP=141     GT:GQ:DP        0|0:100:35      1|0:96:25       0|1:100:79
+5      81093603        rs6894488       G       T       .       PASS    AA=G;DP=140     GT:GQ:DP        0|0:100:35      1|0:97:24       0|1:100:84
+18     42194063        rs2364835       C       T       .       PASS    AA=T;DP=150     GT:GQ:DP        0|0:100:35      1|0:98:28       0|1:100:87
+2      74678710        rs28547532      T       C       .       PASS    AA=T;DP=108     GT:GQ:DP        0|0:100:35      1|1:14:17       0|1:100:58
+14     77396825        rs2098583       T       C       .       PASS    AA=C;DP=120     GT:GQ:DP        0|0:100:35      1|1:31:12       0|1:100:73
+16     85363874        rs1444431       A       C       .       PASS    AA=A;DP=113     GT:GQ:DP        0|0:100:35      1|1:31:18       0|1:100:60
+4      154296955       rs6817434       A       C       .       PASS    AA=A;DP=145     GT:GQ:DP        0|0:100:35      1|1:31:23       0|1:100:78
+2      5346711 rs6759683       C       T       .       PASS    AA=C;DP=124     GT:GQ:DP        0|0:100:35      1|1:32:17       0|1:100:70
+16     2382002 rs8055299       G       A       .       PASS    AA=G;DP=146     GT:GQ:DP        0|0:100:35      1|1:33:24       0|1:100:86
+5      36619692        rs10054009      T       C       .       PASS    AA=T;DP=125     GT:GQ:DP        0|0:100:35      1|1:34:21       0|1:100:68
+7      2381283 rs1010300       C       T       .       PASS    AA=c;DP=148     GT:GQ:DP        0|0:100:35      1|1:39:26       0|1:100:50
+19     35928109        .       T       C       .       PASS    AA=T;DP=142     GT:GQ:DP        0|0:100:35      1|1:43:18       0|1:100:84
+9      126781343       rs10819018      A       C       .       PASS    AA=A;DP=113     GT:GQ:DP        0|0:100:35      1|1:49:18       0|1:100:60
+2      235572330       rs10929078      A       T       .       PASS    AA=T;DP=124     GT:GQ:DP        0|0:100:35      1|1:49:18       0|1:100:69
+5      178754012       rs4357023       C       T       .       PASS    AA=C;DP=123     GT:GQ:DP        0|0:100:35      1|1:52:20       0|1:100:65
+14     80481510        rs2371461       A       G       .       PASS    AA=A;DP=135     GT:GQ:DP        0|0:100:35      1|1:58:21       0|1:100:78
+19     62981821        rs7255638       T       C       .       PASS    AA=T;DP=152     GT:GQ:DP        0|0:100:35      1|1:64:25       0|1:100:49
+2      168970571       rs12618834      A       G       .       PASS    AA=A;DP=124     GT:GQ:DP        0|0:100:35      1|1:64:25       0|1:100:67
+8      104487743       rs7016654       A       C       .       PASS    AA=A;DP=145     GT:GQ:DP        0|0:100:35      1|1:65:35       0|1:100:73
+18     9638939 .       C       T       .       PASS    AA=C;DP=139     GT:GQ:DP        0|0:100:35      1|1:67:24       0|1:100:81
+3      13161592        .       G       T       .       PASS    AA=g;DP=112     GT:GQ:DP        0|0:100:35      1|1:73:26       0|1:100:45
+18     73604337        rs2727057       C       T       .       PASS    AA=T;DP=124     GT:GQ:DP        0|0:100:35      1|1:76:27       0|1:100:45
+2      124865137       rs4848931       C       T       .       PASS    AA=c;DP=117     GT:GQ:DP        0|0:100:35      1|1:76:28       0|1:100:54
+5      64417653        rs264759        T       G       .       PASS    AA=t;DP=139     GT:GQ:DP        0|0:100:35      1|1:76:28       0|1:100:74
+21     30654898        rs2832830       C       T       .       PASS    AA=C;DP=128     GT:GQ:DP        0|0:100:35      1|1:79:30       0|1:100:66
+8      101400115       rs1788173       C       T       .       PASS    AA=T;DP=144     GT:GQ:DP        0|0:100:35      1|1:79:40       0|1:100:71
+10     4505637 rs11252553      G       T       .       PASS    AA=T;DP=148     GT:GQ:DP        0|0:100:35      1|1:91:32       0|1:100:40
+14     20902987        rs2295866       G       A       .       PASS    AA=G;DP=154     GT:GQ:DP        0|0:100:35      1|1:94:33       0|1:100:83
+X      404876  rs28575506      G       A       .       PASS    AA=.;DP=83      GT:GQ:DP        0|0:100:35      1|1:9:10        0|1:100:36
+20     21053105        .       C       T       .       PASS    AA=C;DP=107     GT:GQ:DP        0|0:100:36      0|1:100:10      0|0:100:61
+6      126415644       .       C       G       .       PASS    AA=C;DP=123     GT:GQ:DP        0|0:100:36      0|1:100:13      0|0:100:74
+17     3538470 .       C       T       .       PASS    AA=c;DP=128     GT:GQ:DP        0|0:100:36      0|1:100:13      0|0:100:77
+6      163911859       .       G       T       .       PASS    AA=G;DP=138     GT:GQ:DP        0|0:100:36      0|1:100:14      0|0:100:49
+19     43847720        rs3786835       G       A       .       PASS    AA=g;DP=110     GT:GQ:DP        0|0:100:36      0|1:100:14      0|0:100:51
+21     35038121        .       C       T       .       PASS    AA=C;DP=147     GT:GQ:DP        0|0:100:36      0|1:100:14      0|0:100:96
+1      22435455        .       T       A       .       PASS    AA=T;DP=112     GT:GQ:DP        0|0:100:36      0|1:100:15      0|0:100:61
+13     21959547        rs9317020       G       T       .       PASS    AA=G;DP=133     GT:GQ:DP        0|0:100:36      0|1:100:15      0|0:100:84
+8      54062724        rs60098446      G       C       .       PASS    AA=G;DP=102     GT:GQ:DP        0|0:100:36      0|1:100:17      0|0:100:40
+17     75477972        rs9897149       C       T       .       PASS    AA=c;DP=153     GT:GQ:DP        0|0:100:36      0|1:100:17      0|0:100:56
+17     47333671        .       T       C       .       PASS    AA=T;DP=120     GT:GQ:DP        0|0:100:36      0|1:100:17      0|0:100:66
+19     39348288        .       G       A       .       PASS    AA=G;DP=119     GT:GQ:DP        0|0:100:36      0|1:100:17      0|0:100:69
+8      82085024        rs55744595      C       T       .       PASS    AA=C;DP=141     GT:GQ:DP        0|0:100:36      0|1:100:18      0|0:100:38
+10     94379593        .       G       A       .       PASS    AA=G;DP=105     GT:GQ:DP        0|0:100:36      0|1:100:18      0|0:100:40
+5      169221784       rs10866641      T       C       .       PASS    AA=T;DP=147     GT:GQ:DP        0|0:100:36      0|1:100:18      0|0:100:46
+8      9032350 rs9329179       A       G       .       PASS    AA=A;DP=139     GT:GQ:DP        0|0:100:36      0|1:100:18      0|0:100:47
+5      125769578       .       G       T       .       PASS    AA=G;DP=104     GT:GQ:DP        0|0:100:36      0|1:100:18      0|0:100:51
+2      26411377        .       G       T       .       PASS    AA=G;DP=119     GT:GQ:DP        0|0:100:36      0|1:100:18      0|0:100:58
+5      14492942        rs27117 C       T       .       PASS    AA=C;DP=122     GT:GQ:DP        0|0:100:36      0|1:100:18      0|0:100:67
+2      192745070       .       T       A       .       PASS    AA=A;DP=141     GT:GQ:DP        0|0:100:36      0|1:100:18      0|0:100:86
+10     70905029        .       A       G       .       PASS    AA=A;DP=145     GT:GQ:DP        0|0:100:36      0|1:100:18      0|0:100:91
+17     29822191        rs1367956       A       G       .       PASS    AA=a;DP=152     GT:GQ:DP        0|0:100:36      0|1:100:18      0|0:96:44
+21     21732580        .       A       G       .       PASS    AA=A;DP=125     GT:GQ:DP        0|0:100:36      0|1:100:19      0|0:100:68
+10     96219536        .       T       A       .       PASS    AA=T;DP=121     GT:GQ:DP        0|0:100:36      0|1:100:19      0|0:100:70
+2      165330915       rs355842        C       T       .       PASS    AA=T;DP=127     GT:GQ:DP        0|0:100:36      0|1:100:19      0|0:100:74
+10     4599790 rs10795187      G       A       .       PASS    AA=G;DP=139     GT:GQ:DP        0|0:100:36      0|1:100:19      0|0:100:84
+7      156474907       rs7783220       A       T       .       PASS    AA=T;DP=136     GT:GQ:DP        0|0:100:36      0|1:100:20      0|0:100:36
+15     99674207        rs7168817       T       C       .       PASS    AA=T;DP=149     GT:GQ:DP        0|0:100:36      0|1:100:20      0|0:100:44
+6      136882203       .       C       A       .       PASS    AA=C;DP=107     GT:GQ:DP        0|0:100:36      0|1:100:20      0|0:100:52
+7      8127747 rs6974672       C       G       .       PASS    AA=C;DP=122     GT:GQ:DP        0|0:100:36      0|1:100:20      0|0:100:68
+10     49630048        .       G       A       .       PASS    AA=G;DP=122     GT:GQ:DP        0|0:100:36      0|1:100:20      0|0:100:69
+8      19070332        rs665822        G       A       .       PASS    AA=G;DP=130     GT:GQ:DP        0|0:100:36      0|1:100:20      0|0:100:73
+1      80392947        .       G       A       .       PASS    AA=G;DP=127     GT:GQ:DP        0|0:100:36      0|1:100:20      0|0:100:75
+16     80598816        rs16956202      G       C       .       PASS    AA=G;DP=141     GT:GQ:DP        0|0:100:36      0|1:100:20      0|0:100:80
+9      128160970       rs10987254      A       C       .       PASS    AA=A;DP=124     GT:GQ:DP        0|0:100:36      0|1:100:20      0|0:87:30
+1      172745950       rs2072759       T       C       .       PASS    AA=C;DP=132     GT:GQ:DP        0|0:100:36      0|1:100:21      0|0:100:70
+3      140454152       .       A       G       .       PASS    AA=a;DP=136     GT:GQ:DP        0|0:100:36      0|1:100:21      0|0:100:79
+10     89810725        .       G       C       .       PASS    AA=G;DP=137     GT:GQ:DP        0|0:100:36      0|1:100:21      0|0:100:81
+22     31143776        rs16990428      G       A       .       PASS    AA=A;DP=137     GT:GQ:DP        0|0:100:36      0|1:100:22      0|0:100:40
+11     93417356        rs2511386       A       G       .       PASS    AA=A;DP=152     GT:GQ:DP        0|0:100:36      0|1:100:22      0|0:100:46
+19     34371597        .       T       C       .       PASS    AA=T;DP=106     GT:GQ:DP        0|0:100:36      0|1:100:22      0|0:100:47
+1      56463289        rs60929891      G       A       .       PASS    AA=G;DP=156     GT:GQ:DP        0|0:100:36      0|1:100:22      0|0:100:49
+12     81086188        rs61934067      G       A       .       PASS    AA=G;DP=117     GT:GQ:DP        0|0:100:36      0|1:100:22      0|0:100:55
+16     83664001        rs7184546       C       G       .       PASS    AA=C;DP=157     GT:GQ:DP        0|0:100:36      0|1:100:22      0|0:100:56
+7      49874577        rs6583394       A       T       .       PASS    AA=T;DP=125     GT:GQ:DP        0|0:100:36      0|1:100:22      0|0:100:66
+1      163919192       rs4656457       A       G       .       PASS    AA=A;DP=130;HM2 GT:GQ:DP        0|0:100:36      0|1:100:22      0|0:100:73
+14     50265067        .       T       A       .       PASS    AA=A;DP=132     GT:GQ:DP        0|0:100:36      0|1:100:22      0|0:100:74
+22     21622407        rs11705658      C       T       .       PASS    AA=t;DP=134     GT:GQ:DP        0|0:100:36      0|1:100:22      0|0:100:74
+9      92697923        rs56139234      G       A       .       PASS    AA=G;DP=157     GT:GQ:DP        0|0:100:36      0|1:100:22      0|0:100:84
+22     31342123        .       C       A       .       PASS    AA=c;DP=146     GT:GQ:DP        0|0:100:36      0|1:100:22      0|0:100:85
+22     40458043        rs5751144       G       A       .       PASS    AA=G;DP=143     GT:GQ:DP        0|0:100:36      0|1:100:22      0|0:100:85
+5      177735884       .       T       C       .       PASS    AA=T;DP=165     GT:GQ:DP        0|0:100:36      0|1:100:23      0|0:100:57
+6      6728073 rs17142553      G       T       .       PASS    AA=T;DP=125     GT:GQ:DP        0|0:100:36      0|1:100:23      0|0:100:68
+6      55862134        rs9475444       A       C       .       PASS    AA=A;DP=141     GT:GQ:DP        0|0:100:36      0|1:100:23      0|0:100:71
+4      106582788       .       T       C       .       PASS    AA=T;DP=129     GT:GQ:DP        0|0:100:36      0|1:100:23      0|0:100:72
+6      131733761       rs7755864       T       C       .       PASS    AA=T;DP=117     GT:GQ:DP        0|0:100:36      0|1:100:24      0|0:100:55
+17     9004290 .       C       T       .       PASS    AA=C;DP=129     GT:GQ:DP        0|0:100:36      0|1:100:24      0|0:100:68
+18     9683500 rs55912931      T       A       .       PASS    AA=T;DP=128     GT:GQ:DP        0|0:100:36      0|1:100:24      0|0:100:69
+6      104012269       rs6934048       G       A       .       PASS    AA=G;DP=131     GT:GQ:DP        0|0:100:36      0|1:100:24      0|0:100:71
+5      33091437        rs10074451      C       T       .       PASS    AA=C;DP=145     GT:GQ:DP        0|0:100:36      0|1:100:24      0|0:100:87
+11     36664190        rs34314271      A       G       .       PASS    AA=A;DP=141     GT:GQ:DP        0|0:100:36      0|1:100:25      0|0:100:40
+5      152211348       rs6579974       C       T       .       PASS    AA=C;DP=156     GT:GQ:DP        0|0:100:36      0|1:100:25      0|0:100:46
+6      1209442 .       G       A       .       PASS    AA=G;DP=159     GT:GQ:DP        0|0:100:36      0|1:100:25      0|0:100:57
+8      66546343        .       A       G       .       PASS    AA=A;DP=120     GT:GQ:DP        0|0:100:36      0|1:100:25      0|0:100:58
+1      59960277        .       C       T       .       PASS    AA=C;DP=164     GT:GQ:DP        0|0:100:36      0|1:100:25      0|0:100:59
+8      131679334       rs56008043      G       C       .       PASS    AA=G;DP=127     GT:GQ:DP        0|0:100:36      0|1:100:25      0|0:100:65
+18     21544164        .       C       T       .       PASS    AA=C;DP=142     GT:GQ:DP        0|0:100:36      0|1:100:25      0|0:100:81
+1      28448914        rs529257        G       A       .       PASS    AA=G;DP=144;HM2;HM3     GT:GQ:DP        0|0:100:36      0|1:100:25      0|0:100:83
+12     32623773        rs61926173      C       T       .       PASS    AA=C;DP=145     GT:GQ:DP        0|0:100:36      0|1:100:25      0|0:100:85
+22     25604575        rs739261        C       G       .       PASS    AA=C;DP=154     GT:GQ:DP        0|0:100:36      0|1:100:25      0|0:100:91
+9      93366992        rs12343201      C       T       .       PASS    AA=C;DP=123     GT:GQ:DP        0|0:100:36      0|1:100:26      0|0:100:61
+1      74857234        .       G       A       .       PASS    AA=G;DP=128     GT:GQ:DP        0|0:100:36      0|1:100:26      0|0:100:67
+1      117205344       rs17036392      G       T       .       PASS    AA=G;DP=134;HM2;HM3     GT:GQ:DP        0|0:100:36      0|1:100:26      0|0:100:72
+6      160842114       .       C       G       .       PASS    AA=c;DP=138     GT:GQ:DP        0|0:100:36      0|1:100:26      0|0:100:76
+3      185803857       rs62288576      A       G       .       PASS    AA=A;DP=145     GT:GQ:DP        0|0:100:36      0|1:100:26      0|0:100:82
+12     51174422        rs3809180       A       T       .       PASS    AA=T;DP=149     GT:GQ:DP        0|0:100:36      0|1:100:26      0|0:100:83
+12     114196948       .       G       A       .       PASS    AA=g;DP=151     GT:GQ:DP        0|0:100:36      0|1:100:26      0|0:100:87
+11     40946709        .       T       C       .       PASS    AA=T;DP=120     GT:GQ:DP        0|0:100:36      0|1:100:27      0|0:100:55
+9      78370301        .       G       A       .       PASS    AA=G;DP=126     GT:GQ:DP        0|0:100:36      0|1:100:27      0|0:100:64
+21     42558110        .       C       T       .       PASS    AA=C;DP=147     GT:GQ:DP        0|0:100:36      0|1:100:27      0|0:100:83
+14     98406487        rs4905766       T       C       .       PASS    AA=T;DP=148     GT:GQ:DP        0|0:100:36      0|1:100:27      0|0:100:88
+16     21016412        .       C       T       .       PASS    AA=C;DP=128     GT:GQ:DP        0|0:100:36      0|1:100:28      0|0:100:64
+11     81830815        .       G       C       .       PASS    AA=G;DP=142     GT:GQ:DP        0|0:100:36      0|1:100:28      0|0:100:80
+7      46782062        rs1404719       G       A       .       PASS    AA=A;DP=161     GT:GQ:DP        0|0:100:36      0|1:100:28      0|0:100:89
+22     19323540        .       T       C       .       PASS    AA=.;DP=160     GT:GQ:DP        0|0:100:36      0|1:100:29      0|0:100:49
+16     80560038        rs4580156       T       C       .       PASS    AA=T;DP=118     GT:GQ:DP        0|0:100:36      0|1:100:29      0|0:100:51
+10     78006021        rs1907323       G       A       .       PASS    AA=A;DP=175     GT:GQ:DP        0|0:100:36      0|1:100:29      0|0:100:59
+9      13992458        .       T       C       .       PASS    AA=T;DP=187     GT:GQ:DP        0|0:100:36      0|1:100:29      0|0:100:68
+7      52284406        rs2429803       A       G       .       PASS    AA=A;DP=134     GT:GQ:DP        0|0:100:36      0|1:100:29      0|0:100:70
+8      102724029       rs36094595      A       T       .       PASS    AA=A;DP=136     GT:GQ:DP        0|0:100:36      0|1:100:29      0|0:100:73
+12     8605104 .       G       A       .       PASS    AA=G;DP=140     GT:GQ:DP        0|0:100:36      0|1:100:29      0|0:100:76
+2      214495747       .       T       C       .       PASS    AA=T;DP=142     GT:GQ:DP        0|0:100:36      0|1:100:29      0|0:100:79
+7      11676347        rs28445906      G       A       .       PASS    AA=A;DP=163     GT:GQ:DP        0|0:100:36      0|1:100:29      0|0:100:93
+12     115734264       .       G       A       .       PASS    AA=G;DP=161     GT:GQ:DP        0|0:100:36      0|1:100:30      0|0:100:51
+11     133633869       .       G       A       .       PASS    AA=A;DP=126     GT:GQ:DP        0|0:100:36      0|1:100:30      0|0:100:56
+3      107192129       rs13323912      C       T       .       PASS    AA=T;DP=142     GT:GQ:DP        0|0:100:36      0|1:100:30      0|0:100:70
+15     65001011        .       A       G       .       PASS    AA=A;DP=142     GT:GQ:DP        0|0:100:36      0|1:100:30      0|0:100:76
+19     57094827        rs16983219      T       A       .       PASS    AA=A;DP=166     GT:GQ:DP        0|0:100:36      0|1:100:31      0|0:100:101
+10     112115841       .       C       T       .       PASS    AA=C;DP=171     GT:GQ:DP        0|0:100:36      0|1:100:31      0|0:100:57
+15     34293330        rs11638183      G       T       .       PASS    AA=G;DP=136     GT:GQ:DP        0|0:100:36      0|1:100:31      0|0:100:68
+9      92947472        .       C       T       .       PASS    AA=C;DP=147     GT:GQ:DP        0|0:100:36      0|1:100:31      0|0:100:81
+2      159826219       .       T       C       .       PASS    AA=T;DP=147     GT:GQ:DP        0|0:100:36      0|1:100:32      0|0:100:38
+2      207432744       .       G       A       .       PASS    AA=G;DP=164     GT:GQ:DP        0|0:100:36      0|1:100:32      0|0:100:57
+17     52534327        rs2058578       A       T       .       PASS    AA=A;DP=173     GT:GQ:DP        0|0:100:36      0|1:100:32      0|0:100:61
+20     6712536 rs6117432       C       T       .       PASS    AA=C;DP=137     GT:GQ:DP        0|0:100:36      0|1:100:32      0|0:100:70
+1      111248070       .       G       C       .       PASS    AA=G;DP=151     GT:GQ:DP        0|0:100:36      0|1:100:32      0|0:100:79
+20     1617726 .       C       T       .       PASS    AA=c;DP=127     GT:GQ:DP        0|0:100:36      0|1:100:33      0|0:100:60
+11     47204263        .       A       C       .       PASS    AA=A;DP=166     GT:GQ:DP        0|0:100:36      0|1:100:34      0|0:100:52
+7      143869666       rs62484392      T       C       .       PASS    AA=C;DP=153     GT:GQ:DP        0|0:100:36      0|1:100:36      0|0:100:81
+13     106212413       rs4772813       C       T       .       PASS    AA=C;DP=119     GT:GQ:DP        0|0:100:36      1|0:100:13      0|1:100:70
+12     126531847       rs59408014      C       T       .       PASS    AA=C;DP=130     GT:GQ:DP        0|0:100:36      1|0:100:13      0|1:100:79
+14     43892454        rs58110582      A       C       .       PASS    AA=A;DP=115     GT:GQ:DP        0|0:100:36      1|0:100:15      0|1:100:63
+11     87913219        rs308890        C       G       .       PASS    AA=C;DP=130     GT:GQ:DP        0|0:100:36      1|0:100:16      0|1:100:81
+4      4635639 .       A       G       .       PASS    AA=A;DP=107     GT:GQ:DP        0|0:100:36      1|0:100:17      0|1:100:54
+5      78218187        rs17220863      A       G       .       PASS    AA=G;DP=118     GT:GQ:DP        0|0:100:36      1|0:100:17      0|1:100:66
+6      168570904       .       T       C       .       PASS    AA=C;DP=119     GT:GQ:DP        0|0:100:36      1|0:100:17      0|1:100:68
+18     48820818        rs35724995      G       A       .       PASS    AA=G;DP=127     GT:GQ:DP        0|0:100:36      1|0:100:18      0|1:100:75
+4      9740566 rs56154234      T       C       .       PASS    AA=C;DP=138     GT:GQ:DP        0|0:100:36      1|0:100:19      0|1:100:49
+4      74461673        rs4694608       T       G       .       PASS    AA=T;DP=108     GT:GQ:DP        0|0:100:36      1|0:100:19      0|1:100:50
+5      13893005        .       A       C       .       PASS    AA=a;DP=111     GT:GQ:DP        0|0:100:36      1|0:100:19      0|1:100:58
+22     21144081        rs6002397       C       G       .       PASS    AA=c;DP=123     GT:GQ:DP        0|0:100:36      1|0:100:19      0|1:100:68
+6      168981155       .       A       G       .       PASS    AA=A;DP=135     GT:GQ:DP        0|0:100:36      1|0:100:19      0|1:100:80
+3      2121505 rs9310629       A       G       .       PASS    AA=A;DP=117     GT:GQ:DP        0|0:100:36      1|0:100:20      0|1:100:60
+7      75507516        .       T       C       .       PASS    AA=T;DP=124     GT:GQ:DP        0|0:100:36      1|0:100:20      0|1:100:70
+8      9585778 .       T       C       .       PASS    AA=T;DP=106     GT:GQ:DP        0|0:100:36      1|0:100:21      0|1:100:49
+6      129370794       rs9321145       C       T       .       PASS    AA=C;DP=122     GT:GQ:DP        0|0:100:36      1|0:100:21      0|1:100:61
+2      33837891        rs35367268      C       G       .       PASS    AA=C;DP=124     GT:GQ:DP        0|0:100:36      1|0:100:21      0|1:100:68
+2      102189620       rs6713939       C       T       .       PASS    AA=C;DP=128     GT:GQ:DP        0|0:100:36      1|0:100:21      0|1:100:71
+7      30869869        .       C       T       .       PASS    AA=C;DP=126     GT:GQ:DP        0|0:100:36      1|0:100:21      0|1:100:73
+8      98843291        rs2438202       C       G       .       PASS    AA=C;DP=135     GT:GQ:DP        0|0:100:36      1|0:100:21      0|1:100:77
+4      144519968       rs13116594      T       C       .       PASS    AA=T;DP=138     GT:GQ:DP        0|0:100:36      1|0:100:21      0|1:100:84
+7      102583187       rs7804020       T       C       .       PASS    AA=N;DP=114     GT:GQ:DP        0|0:100:36      1|0:100:21      0|1:78:59
+11     107417165       rs7118335       C       T       .       PASS    AA=C;DP=117     GT:GQ:DP        0|0:100:36      1|0:100:22      0|1:100:59
+12     60183687        .       T       A       .       PASS    AA=T;DP=125     GT:GQ:DP        0|0:100:36      1|0:100:22      0|1:100:67
+8      47916945        rs28475780      T       C       .       PASS    AA=N;DP=136     GT:GQ:DP        0|0:100:36      1|0:100:22      0|1:100:81
+11     11010555        rs7945852       T       C       .       PASS    AA=T;DP=137     GT:GQ:DP        0|0:100:36      1|0:100:22      0|1:100:82
+19     9275071 .       A       G       .       PASS    AA=A;DP=145     GT:GQ:DP        0|0:100:36      1|0:100:22      0|1:100:84
+2      173542163       .       G       A       .       PASS    AA=G;DP=167     GT:GQ:DP        0|0:100:36      1|0:100:23      0|1:100:109
+15     23823524        .       A       G       .       PASS    AA=T;DP=155     GT:GQ:DP        0|0:100:36      1|0:100:23      0|1:100:43
+5      126685116       rs152121        G       T       .       PASS    AA=G;DP=118     GT:GQ:DP        0|0:100:36      1|0:100:23      0|1:100:43
+12     96180950        rs6538793       C       T       .       PASS    AA=C;DP=113     GT:GQ:DP        0|0:100:36      1|0:100:23      0|1:100:55
+6      519810  rs11758772      T       C       .       PASS    AA=T;DP=158     GT:GQ:DP        0|0:100:36      1|0:100:23      0|1:100:56
+11     101924427       rs10160624      G       A       .       PASS    AA=G;DP=115     GT:GQ:DP        0|0:100:36      1|0:100:23      0|1:100:57
+1      205603468       rs11120769      T       G       .       PASS    AA=T;DP=160     GT:GQ:DP        0|0:100:36      1|0:100:23      0|1:100:60
+9      91354468        rs58509443      T       C       .       PASS    AA=T;DP=125     GT:GQ:DP        0|0:100:36      1|0:100:23      0|1:100:63
+7      130830337       rs1043893       C       T       .       PASS    AA=C;DP=124     GT:GQ:DP        0|0:100:36      1|0:100:23      0|1:100:65
+2      50628314        .       A       C       .       PASS    AA=A;DP=123     GT:GQ:DP        0|0:100:36      1|0:100:23      0|1:100:68
+9      109826917       rs7868720       C       T       .       PASS    AA=T;DP=128     GT:GQ:DP        0|0:100:36      1|0:100:23      0|1:100:72
+11     75510128        rs17134568      T       C       .       PASS    AA=C;DP=138     GT:GQ:DP        0|0:100:36      1|0:100:24      0|1:100:36
+7      115692822       .       T       C       .       PASS    AA=C;DP=113     GT:GQ:DP        0|0:100:36      1|0:100:24      0|1:100:55
+20     57357401        rs3026542       T       C       .       PASS    AA=t;DP=116     GT:GQ:DP        0|0:100:36      1|0:100:24      0|1:100:57
+11     120478506       rs56058285      A       C       .       PASS    AA=C;DP=122     GT:GQ:DP        0|0:100:36      1|0:100:24      0|1:100:64
+2      86332140        rs17027099      G       A       .       PASS    AA=G;DP=136     GT:GQ:DP        0|0:100:36      1|0:100:24      0|1:100:80
+2      69297983        rs58112295      C       T       .       PASS    AA=C;DP=144     GT:GQ:DP        0|0:100:36      1|0:100:24      0|1:100:81
+6      160396974       .       A       G       .       PASS    AA=A;DP=140     GT:GQ:DP        0|0:100:36      1|0:100:24      0|1:100:85
+3      53496840        rs57868815      T       C       .       PASS    AA=T;DP=116     GT:GQ:DP        0|0:100:36      1|0:100:25      0|1:100:56
+8      93492661        rs4314630       T       C       .       PASS    AA=C;DP=129     GT:GQ:DP        0|0:100:36      1|0:100:25      0|1:100:66
+12     17762032        rs35476195      T       C       .       PASS    AA=t;DP=136     GT:GQ:DP        0|0:100:36      1|0:100:25      0|1:100:75
+16     82943397        rs62048766      C       T       .       PASS    AA=C;DP=136     GT:GQ:DP        0|0:100:36      1|0:100:25      0|1:100:76
+9      4425456 .       C       A       .       PASS    AA=C;DP=147     GT:GQ:DP        0|0:100:36      1|0:100:25      0|1:100:85
+4      55399209        .       T       G       .       PASS    AA=T;DP=138     GT:GQ:DP        0|0:100:36      1|0:100:26      0|1:100:36
+2      151590021       rs59207069      G       A       .       PASS    AA=G;DP=114     GT:GQ:DP        0|0:100:36      1|0:100:26      0|1:100:41
+6      39616693        rs6931048       G       A       .       PASS    AA=G;DP=172     GT:GQ:DP        0|0:100:36      1|0:100:26      0|1:100:54
+7      102362156       rs1057066       G       C       .       PASS    AA=G;DP=131     GT:GQ:DP        0|0:100:36      1|0:100:26      0|1:100:67
+15     57271399        rs4775124       G       C       .       PASS    AA=G;DP=128     GT:GQ:DP        0|0:100:36      1|0:100:26      0|1:100:68
+5      6937715 .       G       A       .       PASS    AA=G;DP=140     GT:GQ:DP        0|0:100:36      1|0:100:26      0|1:100:75
+9      125591597       rs10818872      T       C       .       PASS    AA=T;DP=140     GT:GQ:DP        0|0:100:36      1|0:100:26      0|1:100:78
+12     13387837        rs7134400       G       T       .       PASS    AA=G;DP=159     GT:GQ:DP        0|0:100:36      1|0:100:27      0|1:100:57
+21     26764482        rs17002189      G       A       .       PASS    AA=G;DP=133     GT:GQ:DP        0|0:100:36      1|0:100:27      0|1:100:68
+16     85647326        rs11648465      G       A       .       PASS    AA=G;DP=139     GT:GQ:DP        0|0:100:36      1|0:100:27      0|1:100:77
+18     21673751        rs1785742       C       G       .       PASS    AA=C;DP=141     GT:GQ:DP        0|0:100:36      1|0:100:27      0|1:100:80
+10     90615248        rs17113721      C       T       .       PASS    AA=C;DP=145     GT:GQ:DP        0|0:100:36      1|0:100:27      0|1:100:81
+6      6818901 .       C       G       .       PASS    AA=C;DP=145     GT:GQ:DP        0|0:100:36      1|0:100:27      0|1:100:84
+9      11462493        .       C       A       .       PASS    AA=C;DP=151     GT:GQ:DP        0|0:100:36      1|0:100:27      0|1:100:90
+8      65524163        rs2577894       A       G       .       PASS    AA=A;DP=161     GT:GQ:DP        0|0:100:36      1|0:100:28      0|1:100:53
+1      4993512 rs10915320      C       T       .       PASS    AA=C;DP=119     GT:GQ:DP        0|0:100:36      1|0:100:28      0|1:100:57
+15     29018493        rs8028459       T       C       .       PASS    AA=T;DP=128     GT:GQ:DP        0|0:100:36      1|0:100:28      0|1:100:63
+9      74702120        rs348479        T       G       .       PASS    AA=G;DP=133     GT:GQ:DP        0|0:100:36      1|0:100:28      0|1:100:66
+20     21837825        .       A       G       .       PASS    AA=A;DP=131     GT:GQ:DP        0|0:100:36      1|0:100:28      0|1:100:68
+4      57719743        .       A       T       .       PASS    AA=A;DP=135     GT:GQ:DP        0|0:100:36      1|0:100:28      0|1:100:69
+16     54597387        rs10153233      G       A       .       PASS    AA=G;DP=140     GT:GQ:DP        0|0:100:36      1|0:100:28      0|1:100:77
+15     97178452        rs61162212      G       A       .       PASS    AA=G;DP=174     GT:GQ:DP        0|0:100:36      1|0:100:29      0|1:100:62
+12     82271701        .       T       C       .       PASS    AA=T;DP=127     GT:GQ:DP        0|0:100:36      1|0:100:29      0|1:100:66
+8      43702641        rs11990995      A       G       .       PASS    AA=.;DP=131     GT:GQ:DP        0|0:100:36      1|0:100:29      0|1:100:66
+4      38297639        rs337618        A       G       .       PASS    AA=A;DP=134     GT:GQ:DP        0|0:100:36      1|0:100:29      0|1:100:70
+17     70735974        .       A       T       .       PASS    AA=A;DP=154     GT:GQ:DP        0|0:100:36      1|0:100:29      0|1:100:86
+13     98124878        .       C       G       .       PASS    AA=C;DP=152     GT:GQ:DP        0|0:100:36      1|0:100:30      0|1:100:42
+1      179529061       rs3845427       T       A       .       PASS    AA=A;DP=129;HM2;HM3     GT:GQ:DP        0|0:100:36      1|0:100:30      0|1:100:63
+5      66586611        rs10940096      C       T       .       PASS    AA=T;DP=130     GT:GQ:DP        0|0:100:36      1|0:100:30      0|1:100:64
+13     113329215       rs4150763       T       C       .       PASS    AA=C;DP=138     GT:GQ:DP        0|0:100:36      1|0:100:30      0|1:100:68
+17     53683309        .       C       T       .       PASS    AA=C;DP=133     GT:GQ:DP        0|0:100:36      1|0:100:30      0|1:100:68
+8      137121293       rs34934044      A       G       .       PASS    AA=A;DP=148     GT:GQ:DP        0|0:100:36      1|0:100:30      0|1:100:84
+13     59341079        rs57127151      C       T       .       PASS    AA=C;DP=140     GT:GQ:DP        0|0:100:36      1|0:100:31      0|1:100:73
+20     31192037        rs11907395      G       T       .       PASS    AA=G;DP=153     GT:GQ:DP        0|0:100:36      1|0:100:31      0|1:100:88
+14     92023619        rs943654        G       T       .       PASS    AA=G;DP=156     GT:GQ:DP        0|0:100:36      1|0:100:32      0|1:100:89
+6      10030925        rs57312042      T       C       .       PASS    AA=C;DP=164     GT:GQ:DP        0|0:100:36      1|0:100:32      0|1:100:95
+4      146966799       .       A       G       .       PASS    AA=A;DP=160     GT:GQ:DP        0|0:100:36      1|0:100:33      0|1:100:91
+7      90509242        rs59695178      G       A       .       PASS    AA=A;DP=170     GT:GQ:DP        0|0:100:36      1|0:100:34      0|1:100:105
+17     2055100 rs11657720      C       T       .       PASS    AA=C;DP=172     GT:GQ:DP        0|0:100:36      1|0:100:35      0|1:100:101
+5      55940694        .       T       G       .       PASS    AA=T;DP=150     GT:GQ:DP        0|0:100:36      1|0:100:35      0|1:100:81
+5      38892175        .       C       T       .       PASS    AA=C;DP=175     GT:GQ:DP        0|0:100:36      1|0:100:37      0|1:100:50
+12     45612564        rs60184762      T       A       .       PASS    AA=T;DP=130     GT:GQ:DP        0|0:100:36      1|0:100:37      0|1:100:57
+11     57873146        .       A       G       .       PASS    AA=A;DP=167     GT:GQ:DP        0|0:100:36      1|0:100:37      0|1:100:78
+1      147995482       .       C       A       .       PASS    AA=C;DP=188     GT:GQ:DP        0|0:100:36      1|0:100:37      0|1:100:89
+21     25031623        rs1023401       G       A       .       PASS    AA=G;DP=129     GT:GQ:DP        0|0:100:36      1|0:12:12       0|1:100:82
+5      3417865 rs57580990      T       A       .       PASS    AA=T;DP=135     GT:GQ:DP        0|0:100:36      1|0:22:19       0|1:100:81
+11     30712513        rs586875        G       A       .       PASS    AA=A;DP=102     GT:GQ:DP        0|0:100:36      1|0:45:13       0|1:100:50
+21     15136195        .       C       T       .       PASS    AA=C;DP=131     GT:GQ:DP        0|0:100:36      1|0:54:13       0|1:100:81
+7      5361316 .       C       A       .       PASS    AA=C;DP=125     GT:GQ:DP        0|0:100:36      1|0:55:15       0|1:100:72
+12     11539642        rs16933848      T       C       .       PASS    AA=t;DP=130     GT:GQ:DP        0|0:100:36      1|0:57:15       0|1:100:77
+9      94490629        rs10992420      C       T       .       PASS    AA=c;DP=106     GT:GQ:DP        0|0:100:36      1|0:58:11       0|1:100:60
+15     83049782        rs59712840      A       C       .       PASS    AA=A;DP=102     GT:GQ:DP        0|0:100:36      1|0:63:20       0|1:100:46
+1      841053  rs28609852      G       A       .       PASS    AA=g;DP=104     GT:GQ:DP        0|0:100:36      1|0:64:13       0|1:100:56
+15     59050669        rs17204698      A       C       .       PASS    AA=A;DP=137     GT:GQ:DP        0|0:100:36      1|0:64:21       0|1:100:81
+12     111986574       rs60013451      G       A       .       PASS    AA=G;DP=175     GT:GQ:DP        0|0:100:36      1|0:64:27       0|1:100:63
+3      164714619       .       G       A       .       PASS    AA=g;DP=124     GT:GQ:DP        0|0:100:36      1|0:66:17       0|1:100:72
+1      6260386 .       C       A       .       PASS    AA=C;DP=137     GT:GQ:DP        0|0:100:36      1|0:67:15       0|1:100:88
+17     76555657        .       G       A       .       PASS    AA=G;DP=127     GT:GQ:DP        0|0:100:36      1|0:72:18       0|1:100:71
+6      169465022       rs12202886      A       G       .       PASS    AA=A;DP=144     GT:GQ:DP        0|0:100:36      1|0:72:22       0|1:100:86
+4      26069186        .       G       A       .       PASS    AA=G;DP=112     GT:GQ:DP        0|0:100:36      1|0:73:23       0|1:100:46
+8      26615162        rs871186        A       T       .       PASS    AA=T;DP=135     GT:GQ:DP        0|0:100:36      1|0:73:24       0|1:100:77
+10     133419438       rs4307646       C       T       .       PASS    AA=N;DP=129     GT:GQ:DP        0|0:100:36      1|0:74:9        0|1:100:86
+3      150606011       .       C       T       .       PASS    AA=C;DP=118     GT:GQ:DP        0|0:100:36      1|0:75:20       0|1:100:62
+19     32812683        .       G       A       .       PASS    AA=.;DP=128     GT:GQ:DP        0|0:100:36      1|0:77:24       0|1:100:69
+6      44249066        rs6938938       G       A       .       PASS    AA=G;DP=106     GT:GQ:DP        0|0:100:36      1|0:78:10       0|1:100:59
+5      5010546 rs10045362      G       A       .       PASS    AA=G;DP=101     GT:GQ:DP        0|0:100:36      1|0:78:12       0|1:100:54
+19     61056069        .       C       T       .       PASS    AA=C;DP=123     GT:GQ:DP        0|0:100:36      1|0:78:14       0|1:100:73
+15     98406822        .       C       T       .       PASS    AA=C;DP=145     GT:GQ:DP        0|0:100:36      1|0:78:20       0|1:100:88
+20     33898069        .       T       C       .       PASS    AA=T;DP=111     GT:GQ:DP        0|0:100:36      1|0:79:17       0|1:100:56
+15     69818817        rs11636972      G       A       .       PASS    AA=A;DP=135     GT:GQ:DP        0|0:100:36      1|0:80:22       0|1:100:77
+19     55786170        rs11672126      C       A       .       PASS    AA=c;DP=120     GT:GQ:DP        0|0:100:36      1|0:81:21       0|1:100:62
+21     34488403        .       G       C       .       PASS    AA=G;DP=150     GT:GQ:DP        0|0:100:36      1|0:82:26       0|1:100:85
+19     21578054        rs60451543      G       A       .       PASS    AA=g;DP=114     GT:GQ:DP        0|0:100:36      1|0:83:13       0|1:100:61
+1      67606115        rs2307145       G       C       .       PASS    AA=G;DP=148;HM2 GT:GQ:DP        0|0:100:36      1|0:84:27       0|1:100:87
+3      158678210       rs28690487      G       A       .       PASS    AA=A;DP=143     GT:GQ:DP        0|0:100:36      1|0:85:22       0|1:100:73
+17     9204796 rs12936502      C       T       .       PASS    AA=C;DP=132     GT:GQ:DP        0|0:100:36      1|0:89:26       0|1:100:72
+7      149894694       rs2177188       G       A       .       PASS    AA=G;DP=122     GT:GQ:DP        0|0:100:36      1|0:90:22       0|1:100:64
+9      2671430 rs7870360       T       C       .       PASS    AA=T;DP=113     GT:GQ:DP        0|0:100:36      1|0:92:12       0|1:100:66
+8      81213039        rs9650268       C       A       .       PASS    AA=C;DP=136     GT:GQ:DP        0|0:100:36      1|0:92:22       0|1:100:81
+16     62180998        rs2966011       G       C       .       PASS    AA=C;DP=90      GT:GQ:DP        0|0:100:36      1|0:94:11       0|1:100:44
+4      75096208        .       G       A       .       PASS    AA=G;DP=138     GT:GQ:DP        0|0:100:36      1|0:94:24       0|1:100:78
+19     3377395 .       G       C       .       PASS    AA=G;DP=110     GT:GQ:DP        0|0:100:36      1|0:99:12       0|1:100:62
+11     119826863       rs11217873      C       T       .       PASS    AA=C;DP=126     GT:GQ:DP        0|0:100:36      1|0:99:30       0|1:100:65
+11     40791973        rs4522161       T       C       .       PASS    AA=A;DP=133     GT:GQ:DP        0|0:100:36      1|1:22:18       0|1:100:80
+8      14752510        rs58440578      G       A       .       PASS    AA=G;DP=108     GT:GQ:DP        0|0:100:36      1|1:31:15       0|1:100:57
+22     47785387        .       C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        0|0:100:36      1|1:37:15       0|1:100:58
+1      29500094        rs57314740      G       A       .       PASS    AA=G;DP=118     GT:GQ:DP        0|0:100:36      1|1:37:22       0|1:100:58
+10     110333905       .       T       A       .       PASS    AA=T;DP=125     GT:GQ:DP        0|0:100:36      1|1:43:16       0|1:100:75
+15     98843860        rs7180454       C       T       .       PASS    AA=C;DP=138     GT:GQ:DP        0|0:100:36      1|1:43:16       0|1:100:86
+1      66660039        rs12093028      G       A       .       PASS    AA=g;DP=140;HM2;HM3     GT:GQ:DP        0|0:100:36      1|1:43:17       0|1:100:86
+4      11033996        rs7660531       T       C       .       PASS    AA=T;DP=111     GT:GQ:DP        0|0:100:36      1|1:43:18       0|1:100:57
+20     50024590        rs6096689       T       C       .       PASS    AA=C;DP=127     GT:GQ:DP        0|0:100:36      1|1:49:18       0|1:100:73
+12     3070755 rs12819603      C       T       .       PASS    AA=C;DP=137     GT:GQ:DP        0|0:100:36      1|1:49:18       0|1:100:86
+9      109945484       rs567960        G       A       .       PASS    AA=A;DP=123     GT:GQ:DP        0|0:100:36      1|1:52:19       0|1:100:64
+1      66545270        rs638111        C       T       .       PASS    AA=C;DP=128     GT:GQ:DP        0|0:100:36      1|1:52:19       0|1:100:72
+2      4075654 rs1565805       T       C       .       PASS    AA=t;DP=140     GT:GQ:DP        0|0:100:36      1|1:52:19       0|1:100:81
+15     65280640        rs15974 G       C       .       PASS    AA=G;DP=123     GT:GQ:DP        0|0:100:36      1|1:55:20       0|1:100:71
+10     122250457       rs2420721       C       T       .       PASS    AA=C;DP=135     GT:GQ:DP        0|0:100:36      1|1:55:20       0|1:100:79
+7      150516231       .       A       G       .       PASS    AA=A;DP=145     GT:GQ:DP        0|0:100:36      1|1:55:23       0|1:100:85
+11     77840632        rs17136630      C       T       .       PASS    AA=C;DP=114     GT:GQ:DP        0|0:100:36      1|1:58:21       0|1:100:57
+20     23234676        rs1891685       T       C       .       PASS    AA=C;DP=119     GT:GQ:DP        0|0:100:36      1|1:58:21       0|1:100:62
+9      122068265       rs10818437      A       G       .       PASS    AA=A;DP=138     GT:GQ:DP        0|0:100:36      1|1:58:21       0|1:100:83
+6      77596011        rs1462468       T       C       .       PASS    AA=C;DP=115     GT:GQ:DP        0|0:100:36      1|1:58:22       0|1:100:57
+18     47888835        rs6508126       T       C       .       PASS    AA=C;DP=151     GT:GQ:DP        0|0:100:36      1|1:61:22       0|1:100:49
+5      41657338        rs6885560       A       C       .       PASS    AA=C;DP=122     GT:GQ:DP        0|0:100:36      1|1:61:23       0|1:100:61
+20     51345067        rs6512877       T       C       .       PASS    AA=C;DP=142     GT:GQ:DP        0|0:100:36      1|1:61:23       0|1:100:84
+4      54201752        rs1996005       T       A       .       PASS    AA=A;DP=141     GT:GQ:DP        0|0:100:36      1|1:64:24       0|1:100:81
+4      188517610       rs1870852       C       T       .       PASS    AA=C;DP=141     GT:GQ:DP        0|0:100:36      1|1:64:24       0|1:100:82
+8      130073065       rs10090304      G       T       .       PASS    AA=T;DP=137     GT:GQ:DP        0|0:100:36      1|1:67:24       0|1:100:77
+2      171127478       rs13397245      G       C       .       PASS    AA=C;DP=118     GT:GQ:DP        0|0:100:36      1|1:67:25       0|1:100:60
+10     3256042 .       G       A       .       PASS    AA=g;DP=121     GT:GQ:DP        0|0:100:36      1|1:69:27       0|1:100:56
+21     35457597        rs2150406       G       A       .       PASS    AA=A;DP=120     GT:GQ:DP        0|0:100:36      1|1:70:27       0|1:100:57
+11     17377942        rs16934019      G       T       .       PASS    AA=G;DP=134     GT:GQ:DP        0|0:100:36      1|1:73:26       0|1:100:73
+3      185016864       rs1061594       C       T       .       PASS    AA=T;DP=137     GT:GQ:DP        0|0:100:36      1|1:73:26       0|1:100:75
+4      163319787       rs13143028      G       A       .       PASS    AA=G;DP=143     GT:GQ:DP        0|0:100:36      1|1:82:30       0|1:100:77
+18     12774037        rs45575332      T       C       .       PASS    AA=T;DP=147     GT:GQ:DP        0|0:100:36      1|1:87:36       0|1:100:76
+12     128726358       rs56973223      C       A       .       PASS    AA=C;DP=147     GT:GQ:DP        0|0:100:36      1|1:88:31       0|1:100:82
+11     58802439        rs7945064       G       A       .       PASS    AA=G;DP=114     GT:GQ:DP        0|0:100:37      0|1:100:13      0|0:100:64
+9      95461367        rs10761251      T       A       .       PASS    AA=A;DP=130     GT:GQ:DP        0|0:100:37      0|1:100:13      0|0:100:77
+14     86265861        rs58586998      C       T       .       PASS    AA=C;DP=106     GT:GQ:DP        0|0:100:37      0|1:100:14      0|0:100:55
+10     101887714       rs6584346       T       A       .       PASS    AA=A;DP=145     GT:GQ:DP        0|0:100:37      0|1:100:15      0|0:100:36
+15     26050505        rs4778140       C       T       .       PASS    AA=C;DP=143     GT:GQ:DP        0|0:100:37      0|1:100:16      0|0:100:50
+1      76672563        rs17098975      T       G       .       PASS    AA=G;DP=131;HM2 GT:GQ:DP        0|0:100:37      0|1:100:17      0|0:100:38
+11     70117291        .       C       T       .       PASS    AA=C;DP=131     GT:GQ:DP        0|0:100:37      0|1:100:17      0|0:100:77
+16     12539215        rs8055050       C       T       .       PASS    AA=C;DP=109     GT:GQ:DP        0|0:100:37      0|1:100:18      0|0:100:53
+11     76082063        rs4944118       G       A       .       PASS    AA=a;DP=158     GT:GQ:DP        0|0:100:37      0|1:100:18      0|0:100:60
+2      3373171 .       G       A       .       PASS    AA=G;DP=140     GT:GQ:DP        0|0:100:37      0|1:100:19      0|0:100:38
+10     17315867        rs4903  C       T       .       PASS    AA=c;DP=109     GT:GQ:DP        0|0:100:37      0|1:100:19      0|0:100:53
+3      42749152        rs7617368       C       T       .       PASS    AA=C;DP=136     GT:GQ:DP        0|0:100:37      0|1:100:19      0|0:100:80
+8      3217552 rs11781311      G       A       .       PASS    AA=G;DP=142     GT:GQ:DP        0|0:100:37      0|1:100:19      0|0:100:85
+5      160327145       rs17058583      T       A       .       PASS    AA=T;DP=147     GT:GQ:DP        0|0:100:37      0|1:100:20      0|0:100:52
+17     9652868 .       G       A       .       PASS    AA=G;DP=116     GT:GQ:DP        0|0:100:37      0|1:100:20      0|0:100:59
+14     20320780        rs11623818      G       A       .       PASS    AA=G;DP=120     GT:GQ:DP        0|0:100:37      0|1:100:20      0|0:100:63
+5      72621205        rs6888669       T       C       .       PASS    AA=T;DP=132     GT:GQ:DP        0|0:100:37      0|1:100:20      0|0:100:78
+5      123159866       rs17150765      C       T       .       PASS    AA=C;DP=137     GT:GQ:DP        0|0:100:37      0|1:100:20      0|0:100:82
+12     116502072       .       G       A       .       PASS    AA=G;DP=155     GT:GQ:DP        0|0:100:37      0|1:100:20      0|0:100:99
+18     57697233        .       T       G       .       PASS    AA=C;DP=144     GT:GQ:DP        0|0:100:37      0|1:100:20      0|0:94:41
+3      96273028        rs11929490      T       C       .       PASS    AA=T;DP=139     GT:GQ:DP        0|0:100:37      0|1:100:21      0|0:100:36
+7      18374673        rs7810091       A       T       .       PASS    AA=A;DP=103     GT:GQ:DP        0|0:100:37      0|1:100:21      0|0:100:39
+6      114221062       rs9372380       C       T       .       PASS    AA=C;DP=149     GT:GQ:DP        0|0:100:37      0|1:100:21      0|0:100:43
+3      194582345       .       G       A       .       PASS    AA=G;DP=161     GT:GQ:DP        0|0:100:37      0|1:100:21      0|0:100:55
+8      51328184        .       C       T       .       PASS    AA=C;DP=130     GT:GQ:DP        0|0:100:37      0|1:100:21      0|0:100:73
+4      177161710       rs1471797       C       T       .       PASS    AA=T;DP=132     GT:GQ:DP        0|0:100:37      0|1:100:21      0|0:100:76
+4      157309899       rs17380743      T       C       .       PASS    AA=T;DP=143     GT:GQ:DP        0|0:100:37      0|1:100:21      0|0:100:81
+2      229119155       rs10048664      C       T       .       PASS    AA=T;DP=141     GT:GQ:DP        0|0:100:37      0|1:100:21      0|0:100:86
+16     67924487        .       G       A       .       PASS    AA=G;DP=122     GT:GQ:DP        0|0:100:37      0|1:100:22      0|0:100:63
+2      21202611        .       G       A       .       PASS    AA=G;DP=131     GT:GQ:DP        0|0:100:37      0|1:100:22      0|0:100:72
+11     65681125        rs10896087      A       G       .       PASS    AA=A;DP=147     GT:GQ:DP        0|0:100:37      0|1:100:22      0|0:100:91
+7      134555251       .       C       T       .       PASS    AA=C;DP=148     GT:GQ:DP        0|0:100:37      0|1:100:23      0|0:100:40
+3      5330327 rs7649616       A       G       .       PASS    AA=A;DP=153     GT:GQ:DP        0|0:100:37      0|1:100:23      0|0:100:48
+1      20292162        rs55947054      A       G       .       PASS    AA=A;DP=122     GT:GQ:DP        0|0:100:37      0|1:100:23      0|0:100:63
+18     26677803        rs60155498      T       C       .       PASS    AA=C;DP=134     GT:GQ:DP        0|0:100:37      0|1:100:23      0|0:100:74
+5      5189207 rs7720806       T       C       .       PASS    AA=C;DP=137     GT:GQ:DP        0|0:100:37      0|1:100:23      0|0:100:79
+7      152179350       rs58528196      C       T       .       PASS    AA=C;DP=142     GT:GQ:DP        0|0:100:37      0|1:100:23      0|0:100:83
+6      166808540       rs9348139       C       T       .       PASS    AA=T;DP=152     GT:GQ:DP        0|0:100:37      0|1:100:23      0|0:100:90
+12     105930538       .       A       C       .       PASS    AA=A;DP=131     GT:GQ:DP        0|0:100:37      0|1:100:24      0|0:100:68
+21     39560972        rs2836967       T       G       .       PASS    AA=T;DP=132     GT:GQ:DP        0|0:100:37      0|1:100:24      0|0:100:68
+12     97653628        rs10860361      G       A       .       PASS    AA=G;DP=138     GT:GQ:DP        0|0:100:37      0|1:100:24      0|0:100:76
+2      143369496       rs6711280       A       T       .       PASS    AA=A;DP=135     GT:GQ:DP        0|0:100:37      0|1:100:24      0|0:100:76
+7      67682801        rs57529444      C       G       .       PASS    AA=C;DP=135     GT:GQ:DP        0|0:100:37      0|1:100:24      0|0:100:77
+1      79868086        rs10874047      T       C       .       PASS    AA=C;DP=141;HM2 GT:GQ:DP        0|0:100:37      0|1:100:24      0|0:100:81
+20     54713023        .       T       C       .       PASS    AA=T;DP=148     GT:GQ:DP        0|0:100:37      0|1:100:24      0|0:100:87
+8      54592197        rs13279206      G       A       .       PASS    AA=G;DP=157     GT:GQ:DP        0|0:100:37      0|1:100:25      0|0:100:47
+6      53503019        rs1002263       G       A       .       PASS    AA=G;DP=157     GT:GQ:DP        0|0:100:37      0|1:100:25      0|0:100:56
+12     17908468        rs10840911      A       C       .       PASS    AA=A;DP=125     GT:GQ:DP        0|0:100:37      0|1:100:25      0|0:100:62
+13     43510914        rs17065309      T       C       .       PASS    AA=T;DP=128     GT:GQ:DP        0|0:100:37      0|1:100:25      0|0:100:68
+2      29646961        .       G       A       .       PASS    AA=G;DP=131     GT:GQ:DP        0|0:100:37      0|1:100:25      0|0:100:69
+2      59474692        rs62145374      G       A       .       PASS    AA=G;DP=141     GT:GQ:DP        0|0:100:37      0|1:100:26      0|0:100:38
+11     20100655        rs59265119      T       C       .       PASS    AA=C;DP=162     GT:GQ:DP        0|0:100:37      0|1:100:26      0|0:100:58
+11     110718559       rs12291412      G       A       .       PASS    AA=A;DP=127     GT:GQ:DP        0|0:100:37      0|1:100:26      0|0:100:63
+15     85338258        rs2594329       T       C       .       PASS    AA=T;DP=132     GT:GQ:DP        0|0:100:37      0|1:100:26      0|0:100:69
+13     108484218       rs9521136       A       T       .       PASS    AA=A;DP=141     GT:GQ:DP        0|0:100:37      0|1:100:26      0|0:100:77
+6      143573328       rs17072316      G       A       .       PASS    AA=G;DP=147     GT:GQ:DP        0|0:100:37      0|1:100:26      0|0:84:29
+7      42897828        rs582214        C       G       .       PASS    AA=C;DP=159     GT:GQ:DP        0|0:100:37      0|1:100:27      0|0:100:56
+10     105815482       .       G       C       .       PASS    AA=G;DP=139     GT:GQ:DP        0|0:100:37      0|1:100:27      0|0:100:76
+10     63893269        rs16917266      G       A       .       PASS    AA=G;DP=146     GT:GQ:DP        0|0:100:37      0|1:100:27      0|0:100:80
+3      186229906       rs59413618      A       G       .       PASS    AA=A;DP=151     GT:GQ:DP        0|0:100:37      0|1:100:27      0|0:100:89
+2      25525639        rs56131005      C       T       .       PASS    AA=C;DP=171     GT:GQ:DP        0|0:100:37      0|1:100:28      0|0:100:54
+4      189864142       rs6812356       C       G       .       PASS    AA=G;DP=147     GT:GQ:DP        0|0:100:37      0|1:100:28      0|0:100:83
+5      125343387       rs426136        T       G       .       PASS    AA=T;DP=146     GT:GQ:DP        0|0:100:37      0|1:100:28      0|0:100:83
+11     65887725        rs1039594       C       T       .       PASS    AA=C;DP=155     GT:GQ:DP        0|0:100:37      0|1:100:28      0|0:100:90
+15     96748052        .       A       C       .       PASS    AA=A;DP=146     GT:GQ:DP        0|0:100:37      0|1:100:29      0|0:100:39
+7      25487265        .       T       C       .       PASS    AA=T;DP=177     GT:GQ:DP        0|0:100:37      0|1:100:29      0|0:100:53
+8      104233186       rs10955310      C       T       .       PASS    AA=T;DP=134     GT:GQ:DP        0|0:100:37      0|1:100:29      0|0:100:68
+11     4179761 rs7105300       C       T       .       PASS    AA=N;DP=150     GT:GQ:DP        0|0:100:37      0|1:100:29      0|0:100:82
+13     65787508        .       G       A       .       PASS    AA=G;DP=143     GT:GQ:DP        0|0:100:37      0|1:100:30      0|0:100:77
+22     18003386        rs13057911      G       T       .       PASS    AA=G;DP=169     GT:GQ:DP        0|0:100:37      0|1:100:31      0|0:100:49
+14     54185030        .       G       T       .       PASS    AA=G;DP=172     GT:GQ:DP        0|0:100:37      0|1:100:31      0|0:100:53
+18     18160691        .       G       A       .       PASS    AA=G;DP=134     GT:GQ:DP        0|0:100:37      0|1:100:31      0|0:100:66
+9      21696983        .       C       T       .       PASS    AA=A;DP=137     GT:GQ:DP        0|0:100:37      0|1:100:31      0|0:100:67
+7      70340092        .       T       C       .       PASS    AA=T;DP=135     GT:GQ:DP        0|0:100:37      0|1:100:31      0|0:100:70
+5      17521415        .       G       T       .       PASS    AA=G;DP=153     GT:GQ:DP        0|0:100:37      0|1:100:31      0|0:94:41
+9      35807579        rs13292880      C       A       .       PASS    AA=C;DP=155     GT:GQ:DP        0|0:100:37      0|1:100:32      0|0:100:85
+2      101667367       rs56029761      C       T       .       PASS    AA=C;DP=135     GT:GQ:DP        0|0:100:37      0|1:100:33      0|0:100:67
+20     32267045        .       G       A       .       PASS    AA=G;DP=146     GT:GQ:DP        0|0:100:37      0|1:100:33      0|0:100:77
+2      180937590       .       T       C       .       PASS    AA=C;DP=152     GT:GQ:DP        0|0:100:37      0|1:100:33      0|0:100:81
+8      120787622       rs6989251       T       C       .       PASS    AA=T;DP=163     GT:GQ:DP        0|0:100:37      0|1:100:34      0|0:100:73
+6      72326921        rs58186674      G       C       .       PASS    AA=G;DP=152     GT:GQ:DP        0|0:100:37      0|1:100:36      0|0:100:77
+15     22631985        rs61994705      C       G       .       PASS    AA=C;DP=151     GT:GQ:DP        0|0:100:37      0|1:100:36      0|0:100:78
+16     81302541        rs62036346      A       G       .       PASS    AA=A;DP=168     GT:GQ:DP        0|0:100:37      0|1:100:40      0|0:100:88
+2      112441641       .       C       T       .       PASS    AA=C;DP=138     GT:GQ:DP        0|0:100:37      1|0:100:14      0|1:100:77
+3      51953752        rs323869        C       T       .       PASS    AA=C;DP=106     GT:GQ:DP        0|0:100:37      1|0:100:15      0|1:100:46
+6      44347900        rs639728        C       T       .       PASS    AA=C;DP=119     GT:GQ:DP        0|0:100:37      1|0:100:17      0|1:100:67
+2      100386569       rs7575422       G       A       .       PASS    AA=G;DP=125     GT:GQ:DP        0|0:100:37      1|0:100:17      0|1:100:71
+16     57499479        .       A       G       .       PASS    AA=A;DP=132     GT:GQ:DP        0|0:100:37      1|0:100:17      0|1:100:75
+10     92705643        rs11596841      A       G       .       PASS    AA=G;DP=120     GT:GQ:DP        0|0:100:37      1|0:100:18      0|1:100:68
+7      149126986       rs10274229      C       G       .       PASS    AA=C;DP=128     GT:GQ:DP        0|0:100:37      1|0:100:18      0|1:100:73
+13     26445782        .       T       C       .       PASS    AA=T;DP=108     GT:GQ:DP        0|0:100:37      1|0:100:19      0|1:100:44
+5      4139431 rs56209239      T       A       .       PASS    AA=T;DP=122     GT:GQ:DP        0|0:100:37      1|0:100:19      0|1:100:67
+18     55791655        .       A       G       .       PASS    AA=A;DP=129     GT:GQ:DP        0|0:100:37      1|0:100:19      0|1:100:73
+17     53175918        rs16942311      A       G       .       PASS    AA=A;DP=139     GT:GQ:DP        0|0:100:37      1|0:100:19      0|1:100:82
+2      225604768       rs441098        A       G       .       PASS    AA=A;DP=147     GT:GQ:DP        0|0:100:37      1|0:100:19      0|1:100:91
+21     18289074        rs13046526      G       A       .       PASS    AA=G;DP=134     GT:GQ:DP        0|0:100:37      1|0:100:20      0|1:100:79
+10     65105403        rs1652412       G       C       .       PASS    AA=G;DP=141     GT:GQ:DP        0|0:100:37      1|0:100:20      0|1:100:81
+7      138216399       rs12112949      A       C       .       PASS    AA=A;DP=143     GT:GQ:DP        0|0:100:37      1|0:100:20      0|1:100:88
+3      174635442       rs247978        G       A       .       PASS    AA=A;DP=134     GT:GQ:DP        0|0:100:37      1|0:100:21      0|1:100:58
+10     86753060        .       G       A       .       PASS    AA=G;DP=117     GT:GQ:DP        0|0:100:37      1|0:100:21      0|1:100:59
+8      21572261        .       T       C       .       PASS    AA=T;DP=138     GT:GQ:DP        0|0:100:37      1|0:100:21      0|1:100:81
+15     68067702        .       T       C       .       PASS    AA=T;DP=149     GT:GQ:DP        0|0:100:37      1|0:100:22      0|1:100:52
+11     58371236        rs1943287       T       C       .       PASS    AA=.;DP=129     GT:GQ:DP        0|0:100:37      1|0:100:22      0|1:100:70
+15     43911568        rs10153045      G       A       .       PASS    AA=G;DP=119     GT:GQ:DP        0|0:100:37      1|0:100:23      0|1:100:58
+15     50467976        rs16964952      T       C       .       PASS    AA=T;DP=129     GT:GQ:DP        0|0:100:37      1|0:100:23      0|1:100:69
+20     59784363        rs7272538       A       G       .       PASS    AA=G;DP=130     GT:GQ:DP        0|0:100:37      1|0:100:23      0|1:100:71
+4      148781967       .       T       A       .       PASS    AA=T;DP=146     GT:GQ:DP        0|0:100:37      1|0:100:24      0|1:100:42
+5      150244815       rs11746108      C       A       .       PASS    AA=A;DP=114     GT:GQ:DP        0|0:100:37      1|0:100:24      0|1:100:55
+2      6776129 rs58977668      A       G       .       PASS    AA=A;DP=119     GT:GQ:DP        0|0:100:37      1|0:100:24      0|1:100:58
+6      159779314       rs59119064      A       G       .       PASS    AA=A;DP=143     GT:GQ:DP        0|0:100:37      1|0:100:24      0|1:100:86
+12     53724539        rs2633409       C       T       .       PASS    AA=T;DP=136     GT:GQ:DP        0|0:100:37      1|0:100:25      0|1:100:62
+9      100260181       .       T       C       .       PASS    AA=T;DP=128     GT:GQ:DP        0|0:100:37      1|0:100:25      0|1:100:64
+10     75238852        rs3812637       C       T       .       PASS    AA=T;DP=126     GT:GQ:DP        0|0:100:37      1|0:100:25      0|1:100:66
+1      175062250       rs12131804      G       A       .       PASS    AA=G;DP=128;HM2;HM3     GT:GQ:DP        0|0:100:37      1|0:100:25      0|1:100:71
+13     98656837        .       C       G       .       PASS    AA=C;DP=134     GT:GQ:DP        0|0:100:37      1|0:100:25      0|1:100:73
+2      80787939        rs17019621      C       A       .       PASS    AA=A;DP=138     GT:GQ:DP        0|0:100:37      1|0:100:25      0|1:100:75
+6      110912518       rs9386904       C       A       .       PASS    AA=C;DP=124     GT:GQ:DP        0|0:100:37      1|0:100:26      0|1:100:63
+16     64499655        .       C       A       .       PASS    AA=C;DP=154     GT:GQ:DP        0|0:100:37      1|0:100:26      0|1:100:92
+13     45264027        rs7333289       G       A       .       PASS    AA=G;DP=140     GT:GQ:DP        0|0:100:37      1|0:100:27      0|1:100:76
+3      56198155        rs60383545      T       C       .       PASS    AA=t;DP=144     GT:GQ:DP        0|0:100:37      1|0:100:27      0|1:100:82
+5      55997957        .       C       T       .       PASS    AA=C;DP=128     GT:GQ:DP        0|0:100:37      1|0:100:28      0|1:100:59
+12     99598649        rs7977879       C       T       .       PASS    AA=C;DP=126     GT:GQ:DP        0|0:100:37      1|0:100:28      0|1:100:65
+6      49662886        .       G       A       .       PASS    AA=G;DP=139     GT:GQ:DP        0|0:100:37      1|0:100:28      0|1:100:72
+6      97625708        rs9374329       C       A       .       PASS    AA=C;DP=139     GT:GQ:DP        0|0:100:37      1|0:100:28      0|1:100:74
+9      19833560        rs10811252      A       G       .       PASS    AA=A;DP=140     GT:GQ:DP        0|0:100:37      1|0:100:28      0|1:100:74
+3      188190057       .       G       A       .       PASS    AA=G;DP=146     GT:GQ:DP        0|0:100:37      1|0:100:28      0|1:100:82
+6      77285411        .       A       G       .       PASS    AA=A;DP=134     GT:GQ:DP        0|0:100:37      1|0:100:29      0|1:100:68
+10     53003530        rs10508948      A       G       .       PASS    AA=A;DP=140     GT:GQ:DP        0|0:100:37      1|0:100:29      0|1:100:74
+6      26382397        rs6901096       C       T       .       PASS    AA=C;DP=151     GT:GQ:DP        0|0:100:37      1|0:100:29      0|1:100:86
+6      34563308        rs7748484       G       A       .       PASS    AA=g;DP=153     GT:GQ:DP        0|0:100:37      1|0:100:30      0|1:100:41
+8      4088900 rs1700106       G       A       .       PASS    AA=G;DP=146     GT:GQ:DP        0|0:100:37      1|0:100:30      0|1:100:67
+5      136527128       .       G       A       .       PASS    AA=G;DP=148     GT:GQ:DP        0|0:100:37      1|0:100:30      0|1:100:84
+4      115053038       .       G       A       .       PASS    AA=G;DP=157     GT:GQ:DP        0|0:100:37      1|0:100:31      0|1:100:41
+12     71467573        .       T       C       .       PASS    AA=C;DP=134     GT:GQ:DP        0|0:100:37      1|0:100:31      0|1:100:65
+16     81396811        rs34338506      G       A       .       PASS    AA=G;DP=138     GT:GQ:DP        0|0:100:37      1|0:100:31      0|1:100:72
+13     111140673       rs1341156       A       G       .       PASS    AA=.;DP=143     GT:GQ:DP        0|0:100:37      1|0:100:31      0|1:100:76
+5      10698871        rs900536        C       T       .       PASS    AA=C;DP=149     GT:GQ:DP        0|0:100:37      1|0:100:31      0|1:100:83
+12     64453921        rs12309024      A       C       .       PASS    AA=A;DP=141     GT:GQ:DP        0|0:100:37      1|0:100:32      0|1:100:70
+22     38924766        rs11912569      C       T       .       PASS    AA=C;DP=130     GT:GQ:DP        0|0:100:37      1|0:100:33      0|1:100:50
+9      103462951       rs12352582      C       G       .       PASS    AA=G;DP=149     GT:GQ:DP        0|0:100:37      1|0:100:33      0|1:100:79
+14     72258454        rs4243642       G       C       .       PASS    AA=G;DP=144     GT:GQ:DP        0|0:100:37      1|0:100:35      0|1:100:73
+13     78596043        rs645414        A       G       .       PASS    AA=G;DP=163     GT:GQ:DP        0|0:100:37      1|0:100:35      0|1:100:91
+16     3205056 rs2113249       T       A       .       PASS    AA=-;DP=162     GT:GQ:DP        0|0:100:37      1|0:100:36      0|1:100:44
+1      235038621       rs7526063       C       T       .       PASS    AA=c;DP=147;HM2;HM3     GT:GQ:DP        0|0:100:37      1|0:100:36      0|1:100:75
+6      93022756        .       G       A       .       PASS    AA=G;DP=154     GT:GQ:DP        0|0:100:37      1|0:100:36      0|1:100:79
+2      230612650       rs61655412      A       G       .       PASS    AA=A;DP=149     GT:GQ:DP        0|0:100:37      1|0:100:37      0|1:100:76
+2      218077072       rs13432053      T       C       .       PASS    AA=T;DP=144     GT:GQ:DP        0|0:100:37      1|0:100:38      0|1:100:65
+5      168938819       .       T       C       .       PASS    AA=T;DP=147     GT:GQ:DP        0|0:100:37      1|0:100:38      0|1:100:75
+3      192703394       rs9842706       T       G       .       PASS    AA=T;DP=153     GT:GQ:DP        0|0:100:37      1|0:100:40      0|1:100:76
+8      128055665       rs2392684       C       T       .       PASS    AA=T;DP=157     GT:GQ:DP        0|0:100:37      1|0:100:40      0|1:100:83
+14     57450655        rs7156340       A       G       .       PASS    AA=A;DP=119     GT:GQ:DP        0|0:100:37      1|0:36:17       0|1:100:66
+7      21662784        rs17144904      G       A       .       PASS    AA=A;DP=120     GT:GQ:DP        0|0:100:37      1|0:52:18       0|1:100:66
+10     85577779        .       A       T       .       PASS    AA=A;DP=98      GT:GQ:DP        0|0:100:37      1|0:53:18       0|1:100:43
+1      37510034        rs905109        G       A       .       PASS    AA=G;DP=111;HM2 GT:GQ:DP        0|0:100:37      1|0:55:15       0|1:100:60
+11     46524051        rs61882746      C       T       .       PASS    AA=T;DP=153     GT:GQ:DP        0|0:100:37      1|0:58:25       0|1:100:90
+7      216306  rs10255772      C       A       .       PASS    AA=.;DP=114     GT:GQ:DP        0|0:100:37      1|0:60:12       0|1:100:65
+20     47457666        .       A       C       .       PASS    AA=A;DP=118     GT:GQ:DP        0|0:100:37      1|0:60:21       0|1:100:62
+21     46340974        .       C       T       .       PASS    AA=C;DP=99      GT:GQ:DP        0|0:100:37      1|0:61:13       0|1:100:39
+6      139409537       rs7762442       T       C       .       PASS    AA=T;DP=131     GT:GQ:DP        0|0:100:37      1|0:62:30       0|1:100:65
+6      168762533       .       A       C       .       PASS    AA=A;DP=142     GT:GQ:DP        0|0:100:37      1|0:64:19       0|1:100:86
+19     18825955        rs757113        G       T       .       PASS    AA=G;DP=162     GT:GQ:DP        0|0:100:37      1|0:66:14       0|1:100:61
+1      57892686        rs11207087      C       T       .       PASS    AA=C;DP=138;HM2 GT:GQ:DP        0|0:100:37      1|0:66:26       0|1:100:74
+20     8609285 .       A       T       .       PASS    AA=A;DP=134     GT:GQ:DP        0|0:100:37      1|0:69:22       0|1:100:32
+7      155557233       rs6952666       G       A       .       PASS    AA=G;DP=124     GT:GQ:DP        0|0:100:37      1|0:72:13       0|1:100:71
+17     17047426        rs12453929      G       A       .       PASS    AA=G;DP=141     GT:GQ:DP        0|0:100:37      1|0:75:17       0|1:100:87
+10     44416165        rs55681327      T       A       .       PASS    AA=T;DP=136     GT:GQ:DP        0|0:100:37      1|0:75:21       0|1:100:78
+8      65959143        rs62520064      T       C       .       PASS    AA=C;DP=121     GT:GQ:DP        0|0:100:37      1|0:76:10       0|1:100:77
+16     19381357        .       G       A       .       PASS    AA=G;DP=146     GT:GQ:DP        0|0:100:37      1|0:76:26       0|1:100:83
+20     581149  rs6116961       G       A       .       PASS    AA=G;DP=135     GT:GQ:DP        0|0:100:37      1|0:76:9        0|1:100:87
+10     37683152        .       A       G       .       PASS    AA=a;DP=136     GT:GQ:DP        0|0:100:37      1|0:77:18       0|1:100:81
+6      143941447       rs11970288      G       A       .       PASS    AA=A;DP=132     GT:GQ:DP        0|0:100:37      1|0:78:16       0|1:100:80
+7      65099376        rs2658585       A       T       .       PASS    AA=a;DP=111     GT:GQ:DP        0|0:100:37      1|0:79:19       0|1:100:49
+5      64885890        rs261255        G       A       .       PASS    AA=A;DP=118     GT:GQ:DP        0|0:100:37      1|0:7:17        0|1:100:52
+1      21670058        .       G       A       .       PASS    AA=.;DP=139     GT:GQ:DP        0|0:100:37      1|0:81:16       0|1:100:86
+2      234049335       rs7724  C       T       .       PASS    AA=C;DP=136     GT:GQ:DP        0|0:100:37      1|0:83:21       0|1:100:79
+3      5269417 .       G       A       .       PASS    AA=g;DP=134     GT:GQ:DP        0|0:100:37      1|0:88:24       0|1:100:58
+15     87562724        rs58861642      A       G       .       PASS    AA=A;DP=133     GT:GQ:DP        0|0:100:37      1|0:89:15       0|1:100:82
+2      169499181       rs555975        G       A       .       PASS    AA=A;DP=129     GT:GQ:DP        0|0:100:37      1|0:89:23       0|1:100:69
+10     134884713       rs55901285      A       G       .       PASS    AA=A;DP=121     GT:GQ:DP        0|0:100:37      1|0:93:13       0|1:100:71
+3      52742467        rs767418        C       T       .       PASS    AA=T;DP=148     GT:GQ:DP        0|0:100:37      1|0:93:27       0|1:100:84
+1      240264871       rs871242        G       T       .       PASS    AA=G;DP=133     GT:GQ:DP        0|0:100:37      1|0:94:23       0|1:100:73
+15     29582878        rs7181223       T       C       .       PASS    AA=T;DP=138     GT:GQ:DP        0|0:100:37      1|0:95:26       0|1:100:71
+4      54159945        rs17083184      C       T       .       PASS    AA=C;DP=147     GT:GQ:DP        0|0:100:37      1|0:96:23       0|1:100:42
+15     59959721        rs2414755       C       T       .       PASS    AA=C;DP=142     GT:GQ:DP        0|0:100:37      1|0:98:20       0|1:100:45
+9      135780316       .       C       T       .       PASS    AA=C;DP=121     GT:GQ:DP        0|0:100:37      1|0:99:19       0|1:100:63
+9      124365879       rs1928621       A       T       .       PASS    AA=T;DP=122     GT:GQ:DP        0|0:100:37      1|1:12:16       0|1:100:27
+3      24878428        rs28514537      G       C       .       PASS    AA=G;DP=129     GT:GQ:DP        0|0:100:37      1|1:19:19       0|1:100:72
+2      219328810       rs7599365       G       A       .       PASS    AA=G;DP=134     GT:GQ:DP        0|0:100:37      1|1:22:20       0|1:100:79
+7      67796700        rs7802198       A       T       .       PASS    AA=A;DP=122     GT:GQ:DP        0|0:100:37      1|1:26:16       0|1:100:70
+6      25885476        rs3949215       A       T       .       PASS    AA=T;DP=138     GT:GQ:DP        0|0:100:37      1|1:30:19       0|1:100:80
+15     93253539        rs34505844      A       G       .       PASS    AA=A;DP=129     GT:GQ:DP        0|0:100:37      1|1:34:14       0|1:100:77
+1      204041945       rs10159439      C       T       .       PASS    AA=C;DP=133     GT:GQ:DP        0|0:100:37      1|1:34:15       0|1:100:80
+8      66694183        rs12335006      T       C       .       PASS    AA=C;DP=139     GT:GQ:DP        0|0:100:37      1|1:34:25       0|1:100:78
+10     121869991       rs4752387       C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        0|0:100:37      1|1:37:15       0|1:100:68
+7      99819831        .       T       C       .       PASS    AA=N;DP=159     GT:GQ:DP        0|0:100:37      1|1:38:24       0|1:100:100
+17     74360693        .       G       A       .       PASS    AA=G;DP=126     GT:GQ:DP        0|0:100:37      1|1:40:16       0|1:100:76
+21     28022808        rs8134876       A       G       .       PASS    AA=A;DP=142     GT:GQ:DP        0|0:100:37      1|1:40:23       0|1:100:86
+3      88841151        rs1495835       T       C       .       PASS    AA=T;DP=121     GT:GQ:DP        0|0:100:37      1|1:42:25       0|1:100:44
+6      30468079        rs3094046       G       A       .       PASS    AA=N;DP=136     GT:GQ:DP        0|0:100:37      1|1:43:16       0|1:100:42
+10     30028983        rs10826677      T       G       .       PASS    AA=G;DP=134     GT:GQ:DP        0|0:100:37      1|1:45:23       0|1:100:76
+10     44212051        rs4520555       A       C       .       PASS    AA=C;DP=115     GT:GQ:DP        0|0:100:37      1|1:46:17       0|1:100:60
+2      13500263        .       G       A       .       PASS    AA=G;DP=132     GT:GQ:DP        0|0:100:37      1|1:49:18       0|1:100:29
+10     53637355        rs59549474      C       G       .       PASS    AA=C;DP=139     GT:GQ:DP        0|0:100:37      1|1:49:18       0|1:100:85
+15     38632594        rs8042729       G       A       .       PASS    AA=G;DP=159     GT:GQ:DP        0|0:100:37      1|1:49:21       0|1:100:63
+3      78593565        rs57089288      G       A       .       PASS    AA=G;DP=116     GT:GQ:DP        0|0:100:37      1|1:58:22       0|1:100:45
+9      92825353        rs296605        G       T       .       PASS    AA=T;DP=131     GT:GQ:DP        0|0:100:37      1|1:58:22       0|1:100:72
+9      9966048 rs7027578       T       C       .       PASS    AA=C;DP=128     GT:GQ:DP        0|0:100:37      1|1:61:22       0|1:100:73
+6      105485647       rs7759938       C       T       .       PASS    AA=C;DP=126     GT:GQ:DP        0|0:100:37      1|1:64:24       0|1:100:64
+7      151344004       rs10232678      C       G       .       PASS    AA=C;DP=134     GT:GQ:DP        0|0:100:37      1|1:64:24       0|1:100:74
+10     49124651        rs166817        A       G       .       PASS    AA=G;DP=158     GT:GQ:DP        0|0:100:37      1|1:65:34       0|1:100:83
+3      46122424        .       T       A       .       PASS    AA=T;DP=158     GT:GQ:DP        0|0:100:37      1|1:65:35       0|1:100:90
+18     65174193        rs11663114      C       T       .       PASS    AA=C;DP=141     GT:GQ:DP        0|0:100:37      1|1:67:38       0|1:100:72
+1      59394499        rs12063372      G       A       .       PASS    AA=G;DP=173     GT:GQ:DP        0|0:100:37      1|1:68:32       0|1:100:65
+10     130165951       rs4750706       T       C       .       PASS    AA=T;DP=141     GT:GQ:DP        0|0:100:37      1|1:69:31       0|1:100:71
+2      59634382        rs28641588      T       A       .       PASS    AA=T;DP=121     GT:GQ:DP        0|0:100:37      1|1:6:16        0|1:100:69
+6      131982177       rs10499183      T       C       .       PASS    AA=t;DP=112     GT:GQ:DP        0|0:100:37      1|1:73:26       0|1:100:51
+12     105032626       .       A       C       .       PASS    AA=A;DP=135     GT:GQ:DP        0|0:100:37      1|1:79:28       0|1:100:69
+5      152527587       rs62398837      C       A       .       PASS    AA=C;DP=150     GT:GQ:DP        0|0:100:37      1|1:82:31       0|1:100:69
+3      193648323       rs57944929      C       T       .       PASS    AA=C;DP=166     GT:GQ:DP        0|0:100:37      1|1:85:30       0|1:100:43
+20     49895046        .       G       T       .       PASS    AA=g;DP=107     GT:GQ:DP        0|0:100:38      0|1:100:12      0|0:100:57
+18     69991207        rs12959980      G       A       .       PASS    AA=G;DP=114     GT:GQ:DP        0|0:100:38      0|1:100:12      0|0:100:66
+12     33692842        rs12297712      T       C       .       PASS    AA=T;DP=110     GT:GQ:DP        0|0:100:38      0|1:100:13      0|0:100:62
+1      151015878       .       C       G       .       PASS    AA=C;DP=120     GT:GQ:DP        0|0:100:38      0|1:100:14      0|0:100:67
+4      9705339 rs2278122       T       A       .       PASS    AA=T;DP=113     GT:GQ:DP        0|0:100:38      0|1:100:16      0|0:100:59
+7      30915216        rs7776667       C       A       .       PASS    AA=C;DP=126     GT:GQ:DP        0|0:100:38      0|1:100:16      0|0:100:70
+1      34670572        .       G       A       .       PASS    AA=G;DP=124     GT:GQ:DP        0|0:100:38      0|1:100:17      0|0:100:73
+15     73186315        .       T       C       .       PASS    AA=T;DP=133     GT:GQ:DP        0|0:100:38      0|1:100:17      0|0:100:79
+22     46933996        .       G       A       .       PASS    AA=G;DP=105     GT:GQ:DP        0|0:100:38      0|1:100:18      0|0:100:41
+1      119084970       rs2764477       C       T       .       PASS    AA=C;DP=114;HM2;HM3     GT:GQ:DP        0|0:100:38      0|1:100:18      0|0:100:59
+3      105249414       rs57185843      G       A       .       PASS    AA=G;DP=126     GT:GQ:DP        0|0:100:38      0|1:100:18      0|0:100:73
+2      159665858       .       A       G       .       PASS    AA=A;DP=142     GT:GQ:DP        0|0:100:38      0|1:100:18      0|0:100:85
+8      145318779       .       G       A       .       PASS    AA=G;DP=144     GT:GQ:DP        0|0:100:38      0|1:100:18      0|0:100:87
+18     52068508        .       T       C       .       PASS    AA=T;DP=144     GT:GQ:DP        0|0:100:38      0|1:100:19      0|0:100:45
+12     3222045 .       G       T       .       PASS    AA=G;DP=141     GT:GQ:DP        0|0:100:38      0|1:100:19      0|0:100:82
+5      6098252 .       C       T       .       PASS    AA=C;DP=141     GT:GQ:DP        0|0:100:38      0|1:100:20      0|0:100:41
+9      130125445       rs7880  G       T       .       PASS    AA=G;DP=137     GT:GQ:DP        0|0:100:38      0|1:100:20      0|0:100:44
+1      212225110       .       G       A       .       PASS    AA=.;DP=149     GT:GQ:DP        0|0:100:38      0|1:100:20      0|0:100:47
+10     19043271        rs2009241       C       G       .       PASS    AA=G;DP=120     GT:GQ:DP        0|0:100:38      0|1:100:20      0|0:100:59
+8      127446878       rs58777157      G       A       .       PASS    AA=G;DP=132     GT:GQ:DP        0|0:100:38      0|1:100:20      0|0:100:76
+6      42439795        rs623763        A       G       .       PASS    AA=G;DP=138     GT:GQ:DP        0|0:100:38      0|1:100:20      0|0:100:81
+11     9115972 .       G       A       .       PASS    AA=G;DP=145     GT:GQ:DP        0|0:100:38      0|1:100:20      0|0:100:88
+12     5030124 rs1860419       G       A       .       PASS    AA=G;DP=139     GT:GQ:DP        0|0:100:38      0|1:100:21      0|0:100:82
+2      69139460        .       T       C       .       PASS    AA=T;DP=160     GT:GQ:DP        0|0:100:38      0|1:100:22      0|0:100:101
+3      128612687       rs2715673       T       G       .       PASS    AA=G;DP=152     GT:GQ:DP        0|0:100:38      0|1:100:22      0|0:100:47
+6      30499702        rs9261919       G       A       .       PASS    AA=G;DP=178     GT:GQ:DP        0|0:100:38      0|1:100:22      0|0:100:61
+3      161828190       .       G       A       .       PASS    AA=G;DP=135     GT:GQ:DP        0|0:100:38      0|1:100:22      0|0:100:67
+16     16131667        .       T       C       .       PASS    AA=T;DP=142     GT:GQ:DP        0|0:100:38      0|1:100:22      0|0:100:69
+3      136176082       .       G       A       .       PASS    AA=G;DP=130     GT:GQ:DP        0|0:100:38      0|1:100:22      0|0:100:71
+12     95950227        .       C       A       .       PASS    AA=C;DP=135     GT:GQ:DP        0|0:100:38      0|1:100:22      0|0:100:75
+12     1559899 rs61596884      G       A       .       PASS    AA=G;DP=136     GT:GQ:DP        0|0:100:38      0|1:100:22      0|0:100:78
+5      134219041       .       A       G       .       PASS    AA=A;DP=140     GT:GQ:DP        0|0:100:38      0|1:100:22      0|0:100:80
+22     41208293        rs12159371      A       G       .       PASS    AA=A;DP=146     GT:GQ:DP        0|0:100:38      0|1:100:22      0|0:100:85
+8      103269497       rs1265139       A       G       .       PASS    AA=A;DP=120     GT:GQ:DP        0|0:100:38      0|1:100:23      0|0:100:60
+5      31094313        rs10036480      C       T       .       PASS    AA=T;DP=142     GT:GQ:DP        0|0:100:38      0|1:100:23      0|0:100:70
+3      186380590       rs16859768      G       C       .       PASS    AA=C;DP=133     GT:GQ:DP        0|0:100:38      0|1:100:23      0|0:100:75
+3      188276797       rs2284749       G       A       .       PASS    AA=A;DP=142     GT:GQ:DP        0|0:100:38      0|1:100:23      0|0:100:82
+10     120797624       rs17098374      G       A       .       PASS    AA=G;DP=143     GT:GQ:DP        0|0:100:38      0|1:100:23      0|0:100:84
+1      17395724        rs2977256       C       T       .       PASS    AA=C;DP=156;HM2 GT:GQ:DP        0|0:100:38      0|1:100:23      0|0:100:98
+22     48279321        rs17001028      T       C       .       PASS    AA=t;DP=158     GT:GQ:DP        0|0:100:38      0|1:100:24      0|0:100:56
+14     28238572        .       T       G       .       PASS    AA=T;DP=123     GT:GQ:DP        0|0:100:38      0|1:100:24      0|0:100:62
+12     116824092       .       A       G       .       PASS    AA=A;DP=138     GT:GQ:DP        0|0:100:38      0|1:100:24      0|0:100:74
+6      139688510       .       A       G       .       PASS    AA=A;DP=134     GT:GQ:DP        0|0:100:38      0|1:100:24      0|0:100:74
+12     25389597        .       C       T       .       PASS    AA=c;DP=145     GT:GQ:DP        0|0:100:38      0|1:100:24      0|0:100:87
+10     101752375       rs11190363      A       C       .       PASS    AA=C;DP=152     GT:GQ:DP        0|0:100:38      0|1:100:24      0|0:100:89
+12     44754364        rs1444585       C       A       .       PASS    AA=A;DP=145     GT:GQ:DP        0|0:100:38      0|1:100:25      0|0:100:41
+8      141762271       rs11995049      G       A       .       PASS    AA=A;DP=154     GT:GQ:DP        0|0:100:38      0|1:100:25      0|0:100:47
+14     97366503        rs2781395       C       T       .       PASS    AA=C;DP=136     GT:GQ:DP        0|0:100:38      0|1:100:25      0|0:100:75
+3      4640892 rs17041046      T       G       .       PASS    AA=T;DP=152     GT:GQ:DP        0|0:100:38      0|1:100:25      0|0:100:88
+3      80343261        rs12631344      G       A       .       PASS    AA=G;DP=140     GT:GQ:DP        0|0:100:38      0|1:100:26      0|0:100:74
+6      15354875        rs12527988      C       A       .       PASS    AA=A;DP=158     GT:GQ:DP        0|0:100:38      0|1:100:27      0|0:100:51
+1      221391755       rs1773740       G       A       .       PASS    AA=A;DP=136     GT:GQ:DP        0|0:100:38      0|1:100:27      0|0:100:74
+1      228589662       rs16851659      C       G       .       PASS    AA=G;DP=134;HM2 GT:GQ:DP        0|0:100:38      0|1:100:28      0|0:100:69
+9      70250517        rs10780935      T       C       .       PASS    AA=C;DP=145     GT:GQ:DP        0|0:100:38      0|1:100:28      0|0:100:72
+15     55327084        .       A       C       .       PASS    AA=A;DP=147     GT:GQ:DP        0|0:100:38      0|1:100:28      0|0:100:80
+11     101620504       rs61280272      G       A       .       PASS    AA=G;DP=153     GT:GQ:DP        0|0:100:38      0|1:100:28      0|0:100:89
+7      31856040        rs10951311      T       C       .       PASS    AA=t;DP=152     GT:GQ:DP        0|0:100:38      0|1:100:28      0|0:100:90
+5      119876093       .       A       G       .       PASS    AA=A;DP=160     GT:GQ:DP        0|0:100:38      0|1:100:28      0|0:100:93
+6      32831895        rs7756516       C       T       .       PASS    AA=c;DP=158     GT:GQ:DP        0|0:100:38      0|1:100:28      0|0:100:93
+7      105944876       .       C       T       .       PASS    AA=C;DP=162     GT:GQ:DP        0|0:100:38      0|1:100:29      0|0:100:51
+5      106826095       rs4085251       G       A       .       PASS    AA=G;DP=163     GT:GQ:DP        0|0:100:38      0|1:100:30      0|0:100:78
+11     82778944        rs58277200      T       C       .       PASS    AA=T;DP=148     GT:GQ:DP        0|0:100:38      0|1:100:30      0|0:100:83
+21     26951401        rs55689069      T       C       .       PASS    AA=T;DP=159     GT:GQ:DP        0|0:100:38      0|1:100:31      0|0:100:47
+5      33405450        rs6891924       C       T       .       PASS    AA=C;DP=183     GT:GQ:DP        0|0:100:38      0|1:100:31      0|0:100:68
+6      100838919       .       C       T       .       PASS    AA=c;DP=148     GT:GQ:DP        0|0:100:38      0|1:100:31      0|0:100:79
+9      79932825        .       T       C       .       PASS    AA=T;DP=169     GT:GQ:DP        0|0:100:38      0|1:100:34      0|0:100:46
+15     89473940        .       C       T       .       PASS    AA=C;DP=185     GT:GQ:DP        0|0:100:38      0|1:100:35      0|0:100:55
+1      225582725       .       T       G       .       PASS    AA=T;DP=145     GT:GQ:DP        0|0:100:38      0|1:100:35      0|0:100:73
+4      166740928       rs28493919      T       C       .       PASS    AA=C;DP=155     GT:GQ:DP        0|0:100:38      0|1:100:37      0|0:100:39
+5      154874188       .       G       C       .       PASS    AA=G;DP=168     GT:GQ:DP        0|0:100:38      0|1:100:37      0|0:100:93
+4      8378867 rs1678325       C       T       .       PASS    AA=C;DP=96      GT:GQ:DP        0|0:100:38      1|0:100:14      0|1:100:37
+11     63332434        .       T       G       .       PASS    AA=T;DP=110     GT:GQ:DP        0|0:100:38      1|0:100:17      0|1:100:43
+5      9888796 rs2892245       T       C       .       PASS    AA=C;DP=118     GT:GQ:DP        0|0:100:38      1|0:100:17      0|1:100:63
+1      32030353        rs16834717      G       T       .       PASS    AA=G;DP=126     GT:GQ:DP        0|0:100:38      1|0:100:17      0|1:100:72
+9      38723745        .       C       T       .       PASS    AA=C;DP=135     GT:GQ:DP        0|0:100:38      1|0:100:17      0|1:100:80
+20     41631031        .       G       A       .       PASS    AA=G;DP=134     GT:GQ:DP        0|0:100:38      1|0:100:17      0|1:100:81
+19     19436965        rs2163804       G       A       .       PASS    AA=G;DP=136     GT:GQ:DP        0|0:100:38      1|0:100:17      0|1:100:83
+14     24286047        .       T       C       .       PASS    AA=T;DP=114     GT:GQ:DP        0|0:100:38      1|0:100:18      0|1:100:57
+18     48871495        rs9945776       A       G       .       PASS    AA=A;DP=129     GT:GQ:DP        0|0:100:38      1|0:100:18      0|1:100:67
+1      173555959       rs7513605       C       T       .       PASS    AA=C;DP=143;HM2 GT:GQ:DP        0|0:100:38      1|0:100:18      0|1:100:89
+12     2097572 rs4126711       G       A       .       PASS    AA=G;DP=151     GT:GQ:DP        0|0:100:38      1|0:100:19      0|1:100:48
+17     33990127        rs8073178       G       C       .       PASS    AA=G;DP=114     GT:GQ:DP        0|0:100:38      1|0:100:19      0|1:100:48
+21     38024599        .       A       G       .       PASS    AA=A;DP=118     GT:GQ:DP        0|0:100:38      1|0:100:19      0|1:100:61
+13     29409700        .       G       A       .       PASS    AA=A;DP=127     GT:GQ:DP        0|0:100:38      1|0:100:19      0|1:100:71
+2      230169567       rs888177        G       A       .       PASS    AA=g;DP=125     GT:GQ:DP        0|0:100:38      1|0:100:20      0|1:100:69
+8      23537837        .       G       A       .       PASS    AA=G;DP=133     GT:GQ:DP        0|0:100:38      1|0:100:20      0|1:100:71
+12     1171495 rs16928264      T       C       .       PASS    AA=T;DP=133     GT:GQ:DP        0|0:100:38      1|0:100:20      0|1:100:75
+7      6094981 rs627222        A       G       .       PASS    AA=G;DP=132     GT:GQ:DP        0|0:100:38      1|0:100:20      0|1:100:75
+13     30178612        rs4544099       G       C       .       PASS    AA=G;DP=139     GT:GQ:DP        0|0:100:38      1|0:100:20      0|1:100:84
+7      5666090 .       A       G       .       PASS    AA=A;DP=109     GT:GQ:DP        0|0:100:38      1|0:100:21      0|1:100:51
+10     62346577        .       T       C       .       PASS    AA=T;DP=122     GT:GQ:DP        0|0:100:38      1|0:100:21      0|1:100:61
+4      117059292       rs6836345       G       T       .       PASS    AA=G;DP=108     GT:GQ:DP        0|0:100:38      1|0:100:22      0|1:100:49
+19     33479143        rs60281413      G       T       .       PASS    AA=G;DP=117     GT:GQ:DP        0|0:100:38      1|0:100:22      0|1:100:60
+19     47693896        rs10415759      G       C       .       PASS    AA=G;DP=146     GT:GQ:DP        0|0:100:38      1|0:100:22      0|1:100:88
+7      142459470       .       A       G       .       PASS    AA=A;DP=148     GT:GQ:DP        0|0:100:38      1|0:100:23      0|1:100:41
+16     3855894 rs8043810       T       C       .       PASS    AA=C;DP=118     GT:GQ:DP        0|0:100:38      1|0:100:23      0|1:100:58
+18     57625439        .       C       T       .       PASS    AA=c;DP=124     GT:GQ:DP        0|0:100:38      1|0:100:23      0|1:100:67
+2      45881165        .       A       G       .       PASS    AA=A;DP=129     GT:GQ:DP        0|0:100:38      1|0:100:23      0|1:100:69
+21     17533466        rs11702584      C       T       .       PASS    AA=c;DP=142     GT:GQ:DP        0|0:100:38      1|0:100:23      0|1:100:79
+20     54939981        rs57902434      C       G       .       PASS    AA=C;DP=140     GT:GQ:DP        0|0:100:38      1|0:100:23      0|1:100:80
+3      23659286        rs11706645      G       A       .       PASS    AA=A;DP=117     GT:GQ:DP        0|0:100:38      1|0:100:24      0|1:100:55
+2      187134792       .       A       G       .       PASS    AA=A;DP=130     GT:GQ:DP        0|0:100:38      1|0:100:24      0|1:100:67
+11     41684734        .       G       A       .       PASS    AA=A;DP=133     GT:GQ:DP        0|0:100:38      1|0:100:24      0|1:100:71
+18     55019022        rs17696124      T       C       .       PASS    AA=t;DP=134     GT:GQ:DP        0|0:100:38      1|0:100:24      0|1:100:74
+4      5822145 rs10937668      C       G       .       PASS    AA=G;DP=137     GT:GQ:DP        0|0:100:38      1|0:100:24      0|1:100:75
+1      197047014       rs28575430      G       A       .       PASS    AA=G;DP=144     GT:GQ:DP        0|0:100:38      1|0:100:24      0|1:100:81
+2      200326651       .       G       A       .       PASS    AA=G;DP=143     GT:GQ:DP        0|0:100:38      1|0:100:25      0|1:100:43
+1      232495412       .       T       C       .       PASS    AA=T;DP=128     GT:GQ:DP        0|0:100:38      1|0:100:25      0|1:100:50
+3      159199669       rs7651498       C       T       .       PASS    AA=C;DP=127     GT:GQ:DP        0|0:100:38      1|0:100:25      0|1:100:64
+7      22050671        .       C       A       .       PASS    AA=C;DP=127     GT:GQ:DP        0|0:100:38      1|0:100:25      0|1:100:64
+7      135354809       rs7804029       C       T       .       PASS    AA=C;DP=129     GT:GQ:DP        0|0:100:38      1|0:100:25      0|1:100:67
+2      118119610       rs2421977       C       T       .       PASS    AA=T;DP=136     GT:GQ:DP        0|0:100:38      1|0:100:25      0|1:100:70
+5      155344597       rs6898317       T       A       .       PASS    AA=T;DP=131     GT:GQ:DP        0|0:100:38      1|0:100:25      0|1:100:70
+5      78162227        .       C       T       .       PASS    AA=C;DP=137     GT:GQ:DP        0|0:100:38      1|0:100:25      0|1:100:74
+8      96096156        rs28712702      G       A       .       PASS    AA=A;DP=138     GT:GQ:DP        0|0:100:38      1|0:100:25      0|1:100:76
+2      237321377       rs6738669       T       C       .       PASS    AA=T;DP=140     GT:GQ:DP        0|0:100:38      1|0:100:25      0|1:100:77
+5      97504452        rs13171112      T       G       .       PASS    AA=T;DP=128     GT:GQ:DP        0|0:100:38      1|0:100:26      0|1:100:63
+5      43290325        rs4428420       C       G       .       PASS    AA=C;DP=145     GT:GQ:DP        0|0:100:38      1|0:100:26      0|1:100:81
+4      29321645        rs16882167      G       A       .       PASS    AA=G;DP=128     GT:GQ:DP        0|0:100:38      1|0:100:28      0|1:100:52
+5      90423996        .       A       G       .       PASS    AA=A;DP=134     GT:GQ:DP        0|0:100:38      1|0:100:28      0|1:100:70
+9      127907703       rs7036252       G       A       .       PASS    AA=G;DP=142     GT:GQ:DP        0|0:100:38      1|0:100:28      0|1:100:79
+16     31241224        .       G       A       .       PASS    AA=G;DP=171     GT:GQ:DP        0|0:100:38      1|0:100:29      0|1:100:102
+1      209369150       rs867848        G       C       .       PASS    AA=G;DP=136;HM2 GT:GQ:DP        0|0:100:38      1|0:100:29      0|1:100:67
+5      116016081       .       G       A       .       PASS    AA=G;DP=143     GT:GQ:DP        0|0:100:38      1|0:100:29      0|1:100:80
+7      155965652       rs56002708      G       C       .       PASS    AA=g;DP=145     GT:GQ:DP        0|0:100:38      1|0:100:29      0|1:100:81
+1      114407083       .       A       G       .       PASS    AA=A;DP=123     GT:GQ:DP        0|0:100:38      1|0:100:30      0|1:100:43
+5      50193797        .       C       A       .       PASS    AA=C;DP=158     GT:GQ:DP        0|0:100:38      1|0:100:30      0|1:100:88
+2      228198524       rs6707434       C       T       .       PASS    AA=C;DP=135     GT:GQ:DP        0|0:100:38      1|0:100:31      0|1:100:64
+5      118095480       .       A       G       .       PASS    AA=A;DP=132     GT:GQ:DP        0|0:100:38      1|0:100:31      0|1:100:65
+14     20214194        .       A       T       .       PASS    AA=A;DP=147     GT:GQ:DP        0|0:100:38      1|0:100:31      0|1:100:78
+8      72676256        rs16937681      A       G       .       PASS    AA=A;DP=149     GT:GQ:DP        0|0:100:38      1|0:100:31      0|1:100:80
+3      7291937 rs11923409      A       G       .       PASS    AA=A;DP=132     GT:GQ:DP        0|0:100:38      1|0:100:32      0|1:100:61
+12     16469864        rs34725238      A       G       .       PASS    AA=A;DP=136     GT:GQ:DP        0|0:100:38      1|0:100:32      0|1:100:69
+1      155824834       .       C       T       .       PASS    AA=C;DP=160     GT:GQ:DP        0|0:100:38      1|0:100:32      0|1:100:89
+11     78934329        rs12273538      G       C       .       PASS    AA=G;DP=154     GT:GQ:DP        0|0:100:38      1|0:100:33      0|1:100:82
+2      61141917        .       T       G       .       PASS    AA=T;DP=176     GT:GQ:DP        0|0:100:38      1|0:100:34      0|1:100:56
+4      72225330        .       C       T       .       PASS    AA=C;DP=121     GT:GQ:DP        0|0:100:38      1|0:100:35      0|1:100:48
+2      168673537       rs11692805      A       T       .       PASS    AA=T;DP=150     GT:GQ:DP        0|0:100:38      1|0:100:35      0|1:100:77
+5      179600412       rs6894217       G       A       .       PASS    AA=G;DP=163     GT:GQ:DP        0|0:100:38      1|0:100:38      0|1:100:90
+10     55164784        .       A       G       .       PASS    AA=A;DP=99      GT:GQ:DP        0|0:100:38      1|0:24:14       0|1:100:46
+22     24752993        rs7290069       C       T       .       PASS    AA=C;DP=145     GT:GQ:DP        0|0:100:38      1|0:36:22       0|1:100:89
+5      31794311        rs61599534      C       T       .       PASS    AA=C;DP=104     GT:GQ:DP        0|0:100:38      1|0:38:17       0|1:100:41
+10     72205724        rs10740359      T       C       .       PASS    AA=T;DP=146     GT:GQ:DP        0|0:100:38      1|0:43:12       0|1:100:95
+11     81782725        rs35333534      C       G       .       PASS    AA=C;DP=115     GT:GQ:DP        0|0:100:38      1|0:58:17       0|1:100:65
+7      49627992        rs7796855       A       C       .       PASS    AA=A;DP=136     GT:GQ:DP        0|0:100:38      1|0:64:16       0|1:100:85
+1      43199912        rs59104428      G       A       .       PASS    AA=G;DP=138     GT:GQ:DP        0|0:100:38      1|0:65:15       0|1:100:89
+19     35022011        .       G       A       .       PASS    AA=G;DP=153     GT:GQ:DP        0|0:100:38      1|0:6:21        0|1:100:96
+2      99661860        rs1404180       C       T       .       PASS    AA=C;DP=144     GT:GQ:DP        0|0:100:38      1|0:74:29       0|1:100:75
+9      5492327 .       G       A       .       PASS    AA=G;DP=118     GT:GQ:DP        0|0:100:38      1|0:81:14       0|1:100:67
+8      2532167 .       C       T       .       PASS    AA=C;DP=130     GT:GQ:DP        0|0:100:38      1|0:81:27       0|1:100:53
+3      782378  .       T       A       .       PASS    AA=T;DP=119     GT:GQ:DP        0|0:100:38      1|0:84:18       0|1:100:62
+14     77813821        .       G       A       .       PASS    AA=G;DP=147     GT:GQ:DP        0|0:100:38      1|0:84:18       0|1:100:89
+2      178230507       .       A       C       .       PASS    AA=A;DP=126     GT:GQ:DP        0|0:100:38      1|0:90:19       0|1:100:68
+14     19795327        rs28594550      G       C       .       PASS    AA=G;DP=128     GT:GQ:DP        0|0:100:38      1|0:92:29       0|1:100:60
+2      222672314       rs349017        G       A       .       PASS    AA=G;DP=147     GT:GQ:DP        0|0:100:38      1|0:96:24       0|1:100:85
+6      33775095        rs4713658       C       G       .       PASS    AA=C;DP=113     GT:GQ:DP        0|0:100:38      1|0:97:16       0|1:100:59
+4      155397542       .       A       G       .       PASS    AA=A;DP=134     GT:GQ:DP        0|0:100:38      1|0:99:20       0|1:100:77
+10     91085490        rs7907230       G       A       .       PASS    AA=G;DP=143     GT:GQ:DP        0|0:100:38      1|1:100:37      0|1:100:70
+11     94413856        rs11602904      A       G       .       PASS    AA=a;DP=155     GT:GQ:DP        0|0:100:38      1|1:17:18       0|1:100:100
+17     32133569        rs6607339       A       G       .       PASS    AA=G;DP=135     GT:GQ:DP        0|0:100:38      1|1:17:18       0|1:100:81
+5      145712339       .       C       G       .       PASS    AA=C;DP=104     GT:GQ:DP        0|0:100:38      1|1:28:12       0|1:100:53
+1      37244204        rs516139        G       C       .       PASS    AA=G;DP=126;HM2 GT:GQ:DP        0|0:100:38      1|1:28:17       0|1:100:72
+9      6654708 rs1755618       G       T       .       PASS    AA=G;DP=159     GT:GQ:DP        0|0:100:38      1|1:31:23       0|1:100:93
+10     42367316        rs3740324       A       G       .       PASS    AA=G;DP=133     GT:GQ:DP        0|0:100:38      1|1:34:14       0|1:100:76
+8      20025207        rs4922129       T       C       .       PASS    AA=T;DP=134     GT:GQ:DP        0|0:100:38      1|1:36:19       0|1:100:78
+10     91126927        .       A       G       .       PASS    AA=A;DP=122     GT:GQ:DP        0|0:100:38      1|1:37:20       0|1:100:62
+20     47818477        .       G       A       .       PASS    AA=g;DP=149     GT:GQ:DP        0|0:100:38      1|1:37:22       0|1:100:88
+10     106836457       rs1086552       T       A       .       PASS    AA=g;DP=159     GT:GQ:DP        0|0:100:38      1|1:39:26       0|1:100:55
+1      240588841       rs3844615       A       G       .       PASS    AA=G;DP=106     GT:GQ:DP        0|0:100:38      1|1:40:16       0|1:100:56
+1      202508348       rs12023063      C       T       .       PASS    AA=T;DP=127;HM2 GT:GQ:DP        0|0:100:38      1|1:41:22       0|1:100:67
+3      39105395        rs7652744       T       C       .       PASS    AA=C;DP=134     GT:GQ:DP        0|0:100:38      1|1:43:16       0|1:100:81
+22     43257386        rs16992349      A       G       .       PASS    AA=A;DP=139     GT:GQ:DP        0|0:100:38      1|1:46:17       0|1:100:84
+9      22309006        rs1575978       T       G       .       PASS    AA=G;DP=126     GT:GQ:DP        0|0:100:38      1|1:46:23       0|1:100:65
+9      78091094        rs1495256       T       G       .       PASS    AA=T;DP=125     GT:GQ:DP        0|0:100:38      1|1:50:24       0|1:100:51
+11     68777793        rs10792034      T       C       .       PASS    AA=C;DP=137     GT:GQ:DP        0|0:100:38      1|1:52:20       0|1:100:76
+7      13885422        rs11509883      T       C       .       PASS    AA=T;DP=138     GT:GQ:DP        0|0:100:38      1|1:52:20       0|1:100:81
+1      212107096       rs11804013      G       C       .       PASS    AA=C;DP=125;HM2 GT:GQ:DP        0|0:100:38      1|1:61:22       0|1:100:63
+6      71374792        rs2691511       T       C       .       PASS    AA=C;DP=124     GT:GQ:DP        0|0:100:38      1|1:61:22       0|1:100:66
+7      20566355        rs10241550      G       C       .       PASS    AA=G;DP=138     GT:GQ:DP        0|0:100:38      1|1:61:23       0|1:100:79
+6      2169329 rs9503128       G       C       .       PASS    AA=G;DP=151     GT:GQ:DP        0|0:100:38      1|1:61:24       0|1:100:92
+1      160435867       rs4098277       G       A       .       PASS    AA=A;DP=137;HM2 GT:GQ:DP        0|0:100:38      1|1:64:23       0|1:100:82
+4      154979937       rs6817120       A       G       .       PASS    AA=A;DP=116     GT:GQ:DP        0|0:100:38      1|1:67:25       0|1:100:56
+9      87408635        rs11141033      A       T       .       PASS    AA=A;DP=156     GT:GQ:DP        0|0:100:38      1|1:67:25       0|1:100:90
+12     108828623       rs2271320       C       T       .       PASS    AA=c;DP=140     GT:GQ:DP        0|0:100:38      1|1:70:25       0|1:100:76
+7      66701229        rs9690371       G       A       .       PASS    AA=A;DP=139     GT:GQ:DP        0|0:100:38      1|1:72:30       0|1:100:72
+20     43622016        rs1569613       T       C       .       PASS    AA=C;DP=120     GT:GQ:DP        0|0:100:38      1|1:73:26       0|1:100:57
+9      1225959 rs945861        G       C       .       PASS    AA=C;DP=149     GT:GQ:DP        0|0:100:38      1|1:73:27       0|1:100:77
+10     23940674        rs7090622       T       A       .       PASS    AA=A;DP=147     GT:GQ:DP        0|0:100:38      1|1:76:27       0|1:100:83
+1      161690650       rs4233397       A       G       .       PASS    AA=G;DP=127;HM2;HM3     GT:GQ:DP        0|0:100:38      1|1:79:28       0|1:100:59
+13     51302126        rs9591433       T       C       .       PASS    AA=T;DP=155     GT:GQ:DP        0|0:100:38      1|1:79:29       0|1:100:48
+3      150725647       rs9289790       G       A       .       PASS    AA=G;DP=124     GT:GQ:DP        0|0:100:38      1|1:79:31       0|1:100:55
+11     114172690       .       T       A       .       PASS    AA=A;DP=161     GT:GQ:DP        0|0:100:38      1|1:85:32       0|1:100:45
+11     17458327        rs985572        T       C       .       PASS    AA=C;DP=145     GT:GQ:DP        0|0:100:38      1|1:88:31       0|1:100:76
+8      132238925       rs4284031       G       A       .       PASS    AA=A;DP=160     GT:GQ:DP        0|0:100:38      1|1:91:33       0|1:100:89
+12     51141205        rs1701776       G       C       .       PASS    AA=C;DP=158     GT:GQ:DP        0|0:100:38      1|1:94:33       0|1:100:50
+16     15991705        rs7198841       A       G       .       PASS    AA=.;DP=117     GT:GQ:DP        0|0:100:39      0|1:100:13      0|0:100:67
+9      23945470        .       G       A       .       PASS    AA=A;DP=121     GT:GQ:DP        0|0:100:39      0|1:100:13      0|0:100:70
+22     43632167        rs6007333       G       T       .       PASS    AA=-;DP=125     GT:GQ:DP        0|0:100:39      0|1:100:15      0|0:100:71
+6      62126728        rs7740066       T       A       .       PASS    AA=a;DP=126     GT:GQ:DP        0|0:100:39      0|1:100:15      0|0:100:76
+14     29215617        .       G       C       .       PASS    AA=G;DP=125     GT:GQ:DP        0|0:100:39      0|1:100:16      0|0:100:66
+11     113750383       .       G       C       .       PASS    AA=C;DP=140     GT:GQ:DP        0|0:100:39      0|1:100:16      0|0:100:86
+20     1744292 rs6044818       C       T       .       PASS    AA=C;DP=142     GT:GQ:DP        0|0:100:39      0|1:100:17      0|0:100:88
+11     76479763        rs11237085      C       T       .       PASS    AA=C;DP=155     GT:GQ:DP        0|0:100:39      0|1:100:17      0|0:100:98
+7      12567578        .       C       T       .       PASS    AA=T;DP=116     GT:GQ:DP        0|0:100:39      0|1:100:18      0|0:100:61
+15     55405992        rs11857206      G       A       .       PASS    AA=G;DP=144     GT:GQ:DP        0|0:100:39      0|1:100:18      0|0:100:88
+4      121931249       .       G       T       .       PASS    AA=G;DP=125     GT:GQ:DP        0|0:100:39      0|1:100:19      0|0:100:65
+13     67878368        rs12859844      A       G       .       PASS    AA=A;DP=138     GT:GQ:DP        0|0:100:39      0|1:100:19      0|0:100:72
+12     113472122       .       A       T       .       PASS    AA=a;DP=141     GT:GQ:DP        0|0:100:39      0|1:100:19      0|0:100:76
+17     45829500        .       G       A       .       PASS    AA=g;DP=167     GT:GQ:DP        0|0:100:39      0|1:100:20      0|0:100:51
+10     96742681        .       C       T       .       PASS    AA=N;DP=130     GT:GQ:DP        0|0:100:39      0|1:100:20      0|0:100:70
+6      86002316        .       G       T       .       PASS    AA=G;DP=130     GT:GQ:DP        0|0:100:39      0|1:100:20      0|0:100:72
+6      88748488        .       G       C       .       PASS    AA=G;DP=138     GT:GQ:DP        0|0:100:39      0|1:100:20      0|0:100:78
+20     51848620        rs7347346       T       G       .       PASS    AA=T;DP=160     GT:GQ:DP        0|0:100:39      0|1:100:21      0|0:100:52
+15     59381754        .       G       C       .       PASS    AA=G;DP=139     GT:GQ:DP        0|0:100:39      0|1:100:21      0|0:100:78
+2      125084110       .       G       A       .       PASS    AA=G;DP=137     GT:GQ:DP        0|0:100:39      0|1:100:21      0|0:100:79
+3      31397058        .       A       G       .       PASS    AA=A;DP=140     GT:GQ:DP        0|0:100:39      0|1:100:21      0|0:100:83
+1      220444368       .       A       G       .       PASS    AA=A;DP=146     GT:GQ:DP        0|0:100:39      0|1:100:21      0|0:100:88
+1      211210441       rs61583935      A       G       .       PASS    AA=G;DP=153     GT:GQ:DP        0|0:100:39      0|1:100:21      0|0:100:92
+2      71567554        .       C       G       .       PASS    AA=C;DP=153     GT:GQ:DP        0|0:100:39      0|1:100:21      0|0:100:94
+1      100285156       rs554742        G       A       .       PASS    AA=A;DP=153     GT:GQ:DP        0|0:100:39      0|1:100:22      0|0:100:44
+15     99087024        rs28706671      T       C       .       PASS    AA=C;DP=153     GT:GQ:DP        0|0:100:39      0|1:100:22      0|0:100:44
+10     133061518       rs11017918      G       A       .       PASS    AA=G;DP=137     GT:GQ:DP        0|0:100:39      0|1:100:22      0|0:100:75
+1      117014580       rs699790        T       C       .       PASS    AA=C;DP=139;HM2 GT:GQ:DP        0|0:100:39      0|1:100:22      0|0:100:76
+7      132138067       .       G       A       .       PASS    AA=G;DP=140     GT:GQ:DP        0|0:100:39      0|1:100:22      0|0:100:78
+11     87803729        rs12794084      G       A       .       PASS    AA=G;DP=139     GT:GQ:DP        0|0:100:39      0|1:100:22      0|0:100:79
+1      33951316        .       A       G       .       PASS    AA=G;DP=158     GT:GQ:DP        0|0:100:39      0|1:100:23      0|0:100:56
+10     97174561        rs60712346      C       T       .       PASS    AA=C;DP=133     GT:GQ:DP        0|0:100:39      0|1:100:23      0|0:100:69
+11     33406131        rs2761200       G       A       .       PASS    AA=A;DP=147     GT:GQ:DP        0|0:100:39      0|1:100:23      0|0:100:85
+5      121784783       rs304386        C       T       .       PASS    AA=C;DP=135     GT:GQ:DP        0|0:100:39      0|1:100:24      0|0:100:74
+17     9351731 .       A       G       .       PASS    AA=A;DP=148     GT:GQ:DP        0|0:100:39      0|1:100:24      0|0:100:87
+2      134959843       rs475921        C       G       .       PASS    AA=G;DP=164     GT:GQ:DP        0|0:100:39      0|1:100:25      0|0:100:56
+8      128382395       .       C       T       .       PASS    AA=C;DP=140     GT:GQ:DP        0|0:100:39      0|1:100:25      0|0:100:72
+1      50425232        rs10158995      C       T       .       PASS    AA=C;DP=142;HM2;HM3     GT:GQ:DP        0|0:100:39      0|1:100:25      0|0:100:76
+4      164436060       .       A       G       .       PASS    AA=A;DP=138     GT:GQ:DP        0|0:100:39      0|1:100:25      0|0:100:76
+17     13743402        rs12451752      T       G       .       PASS    AA=T;DP=141     GT:GQ:DP        0|0:100:39      0|1:100:25      0|0:100:78
+15     37158034        rs11070173      C       G       .       PASS    AA=G;DP=140     GT:GQ:DP        0|0:100:39      0|1:100:25      0|0:100:80
+2      599295  rs2966397       C       T       .       PASS    AA=C;DP=124     GT:GQ:DP        0|0:100:39      0|1:100:26      0|0:100:47
+1      174755857       rs36081942      C       T       .       PASS    AA=C;DP=147     GT:GQ:DP        0|0:100:39      0|1:100:26      0|0:100:80
+6      118238728       .       A       G       .       PASS    AA=G;DP=142     GT:GQ:DP        0|0:100:39      0|1:100:26      0|0:100:80
+6      28626278        .       G       A       .       PASS    AA=G;DP=149     GT:GQ:DP        0|0:100:39      0|1:100:26      0|0:100:85
+5      9566972 .       G       A       .       PASS    AA=G;DP=120     GT:GQ:DP        0|0:100:39      0|1:100:27      0|0:100:45
+16     76672968        .       G       A       .       PASS    AA=G;DP=158     GT:GQ:DP        0|0:100:39      0|1:100:27      0|0:100:93
+14     69787599        rs1469253       C       T       .       PASS    AA=C;DP=140     GT:GQ:DP        0|0:100:39      0|1:100:28      0|0:100:65
+16     80154564        rs3900599       A       G       .       PASS    AA=A;DP=147     GT:GQ:DP        0|0:100:39      0|1:100:28      0|0:100:79
+18     43471022        rs28650034      C       T       .       PASS    AA=C;DP=149     GT:GQ:DP        0|0:100:39      0|1:100:28      0|0:100:82
+4      149986304       rs17025320      G       A       .       PASS    AA=G;DP=153     GT:GQ:DP        0|0:100:39      0|1:100:28      0|0:100:86
+8      100725316       .       C       G       .       PASS    AA=C;DP=174     GT:GQ:DP        0|0:100:39      0|1:100:28      0|0:100:98
+11     103503533       rs10895577      A       C       .       PASS    AA=c;DP=154     GT:GQ:DP        0|0:100:39      0|1:100:29      0|0:100:34
+5      114712238       .       A       C       .       PASS    AA=A;DP=155     GT:GQ:DP        0|0:100:39      0|1:100:29      0|0:100:39
+15     58784360        rs13329075      A       G       .       PASS    AA=G;DP=156     GT:GQ:DP        0|0:100:39      0|1:100:29      0|0:100:45
+4      129844438       .       C       T       .       PASS    AA=T;DP=164     GT:GQ:DP        0|0:100:39      0|1:100:29      0|0:100:48
+22     25506717        .       A       T       .       PASS    AA=A;DP=155     GT:GQ:DP        0|0:100:39      0|1:100:30      0|0:100:42
+12     110067508       rs7972123       G       A       .       PASS    AA=G;DP=150     GT:GQ:DP        0|0:100:39      0|1:100:30      0|0:100:81
+6      100743096       .       T       C       .       PASS    AA=T;DP=149     GT:GQ:DP        0|0:100:39      0|1:100:31      0|0:100:80
+15     96779465        .       G       A       .       PASS    AA=G;DP=161     GT:GQ:DP        0|0:100:39      0|1:100:32      0|0:100:42
+11     29461359        rs329523        T       C       .       PASS    AA=T;DP=131     GT:GQ:DP        0|0:100:39      0|1:100:32      0|0:100:58
+17     43326262        rs35611888      C       G       .       PASS    AA=C;DP=169     GT:GQ:DP        0|0:100:39      0|1:100:32      0|0:100:59
+12     118034828       rs4766930       C       A       .       PASS    AA=A;DP=153     GT:GQ:DP        0|0:100:39      0|1:100:32      0|0:100:82
+7      8331984 rs10260396      C       G       .       PASS    AA=G;DP=158     GT:GQ:DP        0|0:100:39      0|1:100:32      0|0:100:83
+2      2542973 rs11687371      G       A       .       PASS    AA=g;DP=154     GT:GQ:DP        0|0:100:39      0|1:100:33      0|0:100:43
+2      88256162        rs2292868       G       A       .       PASS    AA=G;DP=180     GT:GQ:DP        0|0:100:39      0|1:100:34      0|0:100:63
+6      38734563        rs7752797       A       G       .       PASS    AA=A;DP=154     GT:GQ:DP        0|0:100:39      0|1:100:34      0|0:100:82
+3      40758155        .       T       C       .       PASS    AA=T;DP=157     GT:GQ:DP        0|0:100:39      0|1:100:34      0|0:100:86
+9      86630661        .       T       A       .       PASS    AA=T;DP=179     GT:GQ:DP        0|0:100:39      0|1:100:37      0|0:100:54
+2      231094089       rs55759935      G       C       .       PASS    AA=G;DP=147     GT:GQ:DP        0|0:100:39      0|1:100:39      0|0:100:72
+11     131633941       rs718851        C       T       .       PASS    AA=T;DP=177     GT:GQ:DP        0|0:100:39      0|1:100:43      0|0:100:49
+8      129022495       .       C       T       .       PASS    AA=T;DP=139     GT:GQ:DP        0|0:100:39      1|0:100:16      0|1:100:85
+9      76897515        rs10869500      A       T       .       PASS    AA=T;DP=162     GT:GQ:DP        0|0:100:39      1|0:100:18      0|1:100:49
+3      152763015       .       T       C       .       PASS    AA=T;DP=123     GT:GQ:DP        0|0:100:39      1|0:100:18      0|1:100:67
+3      115375090       .       C       T       .       PASS    AA=C;DP=132     GT:GQ:DP        0|0:100:39      1|0:100:18      0|1:100:77
+7      120149337       rs12533756      T       G       .       PASS    AA=G;DP=138     GT:GQ:DP        0|0:100:39      1|0:100:18      0|1:100:82
+20     37582674        .       G       T       .       PASS    AA=g;DP=134     GT:GQ:DP        0|0:100:39      1|0:100:19      0|1:100:77
+17     20111684        .       A       G       .       PASS    AA=A;DP=140     GT:GQ:DP        0|0:100:39      1|0:100:19      0|1:100:83
+1      8292675 rs11121157      G       A       .       PASS    AA=A;DP=123;HM2;HM3     GT:GQ:DP        0|0:100:39      1|0:100:20      0|1:100:67
+17     71557276        rs7210777       T       C       .       PASS    AA=T;DP=126     GT:GQ:DP        0|0:100:39      1|0:100:20      0|1:100:68
+9      6165164 .       G       C       .       PASS    AA=G;DP=130     GT:GQ:DP        0|0:100:39      1|0:100:20      0|1:100:74
+21     40943016        rs62223649      T       C       .       PASS    AA=T;DP=135     GT:GQ:DP        0|0:100:39      1|0:100:20      0|1:100:75
+12     49679589        rs60886362      G       A       .       PASS    AA=G;DP=150     GT:GQ:DP        0|0:100:39      1|0:100:21      0|1:100:46
+13     26544317        .       C       G       .       PASS    AA=C;DP=120     GT:GQ:DP        0|0:100:39      1|0:100:21      0|1:100:60
+2      224579480       rs1530021       A       G       .       PASS    AA=A;DP=150     GT:GQ:DP        0|0:100:39      1|0:100:21      0|1:100:74
+5      110963223       .       C       T       .       PASS    AA=C;DP=137     GT:GQ:DP        0|0:100:39      1|0:100:21      0|1:100:78
+17     61386428        rs965180        A       G       .       PASS    AA=G;DP=146     GT:GQ:DP        0|0:100:39      1|0:100:21      0|1:100:89
+16     51879694        rs17394680      A       G       .       PASS    AA=A;DP=133     GT:GQ:DP        0|0:100:39      1|0:100:22      0|1:100:70
+13     89554984        rs2637451       G       T       .       PASS    AA=G;DP=142     GT:GQ:DP        0|0:100:39      1|0:100:22      0|1:100:80
+11     17421768        rs59392822      C       A       .       PASS    AA=C;DP=143     GT:GQ:DP        0|0:100:39      1|0:100:22      0|1:100:83
+8      69114459        rs920004        C       T       .       PASS    AA=C;DP=146     GT:GQ:DP        0|0:100:39      1|0:100:22      0|1:100:85
+5      3878001 rs13180582      G       C       .       PASS    AA=C;DP=156     GT:GQ:DP        0|0:100:39      1|0:100:22      0|1:100:97
+12     54830224        .       G       A       .       PASS    AA=G;DP=135     GT:GQ:DP        0|0:100:39      1|0:100:23      0|1:100:72
+3      38777255        rs7641844       A       G       .       PASS    AA=A;DP=135     GT:GQ:DP        0|0:100:39      1|0:100:23      0|1:100:73
+1      57189188        rs646606        A       G       .       PASS    AA=A;DP=135     GT:GQ:DP        0|0:100:39      1|0:100:23      0|1:100:74
+11     130874678       .       T       C       .       PASS    AA=T;DP=140     GT:GQ:DP        0|0:100:39      1|0:100:23      0|1:100:79
+2      102315371       rs12466380      A       G       .       PASS    AA=G;DP=160     GT:GQ:DP        0|0:100:39      1|0:100:24      0|1:100:54
+16     64951891        rs16970013      G       A       .       PASS    AA=G;DP=163     GT:GQ:DP        0|0:100:39      1|0:100:24      0|1:100:55
+12     16172512        rs61914744      G       A       .       PASS    AA=G;DP=143     GT:GQ:DP        0|0:100:39      1|0:100:24      0|1:100:80
+12     78234559        .       T       C       .       PASS    AA=C;DP=151     GT:GQ:DP        0|0:100:39      1|0:100:24      0|1:100:84
+6      58852629        .       G       T       .       PASS    AA=.;DP=128     GT:GQ:DP        0|0:100:39      1|0:100:25      0|1:100:58
+5      34776303        rs10035600      C       T       .       PASS    AA=C;DP=130     GT:GQ:DP        0|0:100:39      1|0:100:25      0|1:100:63
+20     20230227        rs61091126      G       A       .       PASS    AA=G;DP=140     GT:GQ:DP        0|0:100:39      1|0:100:25      0|1:100:73
+5      128327813       rs2577533       G       A       .       PASS    AA=G;DP=138     GT:GQ:DP        0|0:100:39      1|0:100:25      0|1:100:73
+5      64001986        rs58887957      G       A       .       PASS    AA=G;DP=137     GT:GQ:DP        0|0:100:39      1|0:100:25      0|1:100:75
+14     22702044        rs7143368       A       G       .       PASS    AA=N;DP=144     GT:GQ:DP        0|0:100:39      1|0:100:25      0|1:100:83
+17     7752340 rs9899375       C       T       .       PASS    AA=C;DP=162     GT:GQ:DP        0|0:100:39      1|0:100:26      0|1:100:50
+9      111660159       .       C       T       .       PASS    AA=C;DP=159     GT:GQ:DP        0|0:100:39      1|0:100:26      0|1:100:92
+20     55952528        .       T       C       .       PASS    AA=T;DP=169     GT:GQ:DP        0|0:100:39      1|0:100:27      0|1:100:106
+5      9340073 rs6873909       G       A       .       PASS    AA=G;DP=152     GT:GQ:DP        0|0:100:39      1|0:100:27      0|1:100:44
+18     38560643        rs8087992       C       A       .       PASS    AA=C;DP=147     GT:GQ:DP        0|0:100:39      1|0:100:27      0|1:100:82
+3      151908392       rs1897491       C       T       .       PASS    AA=C;DP=148     GT:GQ:DP        0|0:100:39      1|0:100:28      0|1:100:37
+2      49424879        .       G       A       .       PASS    AA=G;DP=140     GT:GQ:DP        0|0:100:39      1|0:100:28      0|1:100:72
+15     38312626        .       A       G       .       PASS    AA=A;DP=142     GT:GQ:DP        0|0:100:39      1|0:100:29      0|1:100:33
+16     11481334        rs12448592      G       T       .       PASS    AA=c;DP=136     GT:GQ:DP        0|0:100:39      1|0:100:29      0|1:100:68
+1      170944305       rs989340        C       G       .       PASS    AA=G;DP=139;HM2 GT:GQ:DP        0|0:100:39      1|0:100:29      0|1:100:71
+2      196860258       rs60510647      A       G       .       PASS    AA=G;DP=145     GT:GQ:DP        0|0:100:39      1|0:100:29      0|1:100:76
+11     71888234        rs57333085      T       C       .       PASS    AA=T;DP=140     GT:GQ:DP        0|0:100:39      1|0:100:30      0|1:100:75
+6      562523  rs2294667       A       T       .       PASS    AA=A;DP=144     GT:GQ:DP        0|0:100:39      1|0:100:30      0|1:100:75
+8      123522731       rs16897024      C       T       .       PASS    AA=C;DP=161     GT:GQ:DP        0|0:100:39      1|0:100:30      0|1:100:89
+19     34697701        rs4545933       C       G       .       PASS    AA=C;DP=161     GT:GQ:DP        0|0:100:39      1|0:100:30      0|1:100:92
+16     79824153        rs12149166      A       G       .       PASS    AA=A;DP=161     GT:GQ:DP        0|0:100:39      1|0:100:30      0|1:100:93
+10     17346801        rs58989973      A       G       .       PASS    AA=G;DP=131     GT:GQ:DP        0|0:100:39      1|0:100:31      0|1:100:64
+3      106154438       .       C       T       .       PASS    AA=C;DP=140     GT:GQ:DP        0|0:100:39      1|0:100:31      0|1:100:70
+4      57772295        rs9993983       C       A       .       PASS    AA=C;DP=156     GT:GQ:DP        0|0:100:39      1|0:100:31      0|1:100:87
+1      225836247       .       A       G       .       PASS    AA=A;DP=117     GT:GQ:DP        0|0:100:39      1|0:100:32      0|1:100:49
+2      190148599       rs11690401      G       A       .       PASS    AA=G;DP=127     GT:GQ:DP        0|0:100:39      1|0:100:32      0|1:100:58
+11     94881188        rs34943553      C       T       .       PASS    AA=T;DP=141     GT:GQ:DP        0|0:100:39      1|0:100:32      0|1:100:70
+2      168360694       rs11892152      C       G       .       PASS    AA=G;DP=159     GT:GQ:DP        0|0:100:39      1|0:100:37      0|1:100:82
+5      98363241        rs17166548      C       T       .       PASS    AA=c;DP=146     GT:GQ:DP        0|0:100:39      1|0:100:40      0|1:100:67
+1      41147678        rs6688337       G       T       .       PASS    AA=G;DP=92      GT:GQ:DP        0|0:100:39      1|0:25:10       0|1:100:34
+8      143877070       rs11997117      G       A       .       PASS    AA=G;DP=133     GT:GQ:DP        0|0:100:39      1|0:40:15       0|1:100:75
+1      30247408        rs441623        G       A       .       PASS    AA=G;DP=140     GT:GQ:DP        0|0:100:39      1|0:44:20       0|1:100:81
+12     2431670 rs2239082       A       G       .       PASS    AA=A;DP=135     GT:GQ:DP        0|0:100:39      1|0:51:17       0|1:100:81
+11     62441568        rs60668695      C       T       .       PASS    AA=C;DP=146     GT:GQ:DP        0|0:100:39      1|0:55:17       0|1:100:93
+14     68350968        rs7141082       C       T       .       PASS    AA=C;DP=146     GT:GQ:DP        0|0:100:39      1|0:55:28       0|1:100:80
+19     37515522        .       C       T       .       PASS    AA=C;DP=105     GT:GQ:DP        0|0:100:39      1|0:56:19       0|1:100:37
+20     20429987        rs6035638       A       G       .       PASS    AA=G;DP=149     GT:GQ:DP        0|0:100:39      1|0:56:30       0|1:100:62
+3      29400040        .       G       A       .       PASS    AA=G;DP=142     GT:GQ:DP        0|0:100:39      1|0:70:29       0|1:100:73
+2      20601965        rs6761928       G       A       .       PASS    AA=G;DP=122     GT:GQ:DP        0|0:100:39      1|0:76:14       0|1:100:54
+15     98092270        rs7175181       T       C       .       PASS    AA=T;DP=140     GT:GQ:DP        0|0:100:39      1|0:83:21       0|1:100:80
+10     72042022        .       A       G       .       PASS    AA=A;DP=130     GT:GQ:DP        0|0:100:39      1|0:86:19       0|1:100:73
+1      114336997       rs1011847       C       T       .       PASS    AA=C;DP=146;HM2 GT:GQ:DP        0|0:100:39      1|0:88:25       0|1:100:83
+4      3268836 .       C       T       .       PASS    AA=C;DP=134     GT:GQ:DP        0|0:100:39      1|0:90:13       0|1:100:31
+7      32783727        rs1868782       G       A       .       PASS    AA=G;DP=159     GT:GQ:DP        0|0:100:39      1|0:91:26       0|1:100:96
+5      76094924        .       T       C       .       PASS    AA=t;DP=147     GT:GQ:DP        0|0:100:39      1|0:93:27       0|1:100:81
+3      191424013       .       G       A       .       PASS    AA=G;DP=126     GT:GQ:DP        0|0:100:39      1|0:95:23       0|1:100:62
+15     89222260        rs8024061       C       T       .       PASS    AA=C;DP=117     GT:GQ:DP        0|0:100:39      1|0:98:22       0|1:100:55
+19     2884490 .       C       T       .       PASS    AA=C;DP=143     GT:GQ:DP        0|0:100:39      1|0:98:24       0|1:100:76
+10     35191858        .       C       A       .       PASS    AA=C;DP=103     GT:GQ:DP        0|0:100:39      1|0:9:18        0|1:100:46
+5      173889562       rs2858  A       C       .       PASS    AA=A;DP=157     GT:GQ:DP        0|0:100:39      1|1:24:23       0|1:100:96
+3      128091186       rs7612097       G       C       .       PASS    AA=G;DP=149     GT:GQ:DP        0|0:100:39      1|1:31:12       0|1:100:47
+1      232733870       rs823495        A       T       .       PASS    AA=A;DP=110     GT:GQ:DP        0|0:100:39      1|1:46:17       0|1:100:55
+22     33918600        rs134430        C       A       .       PASS    AA=A;DP=145     GT:GQ:DP        0|0:100:39      1|1:47:26       0|1:100:80
+3      158268819       .       C       T       .       PASS    AA=c;DP=126     GT:GQ:DP        0|0:100:39      1|1:49:18       0|1:100:65
+5      78677083        rs7719464       T       C       .       PASS    AA=T;DP=139     GT:GQ:DP        0|0:100:39      1|1:50:26       0|1:100:75
+3      63926805        rs3774720       C       T       .       PASS    AA=T;DP=139     GT:GQ:DP        0|0:100:39      1|1:52:20       0|1:100:78
+7      93950569        rs6953802       C       T       .       PASS    AA=T;DP=138     GT:GQ:DP        0|0:100:39      1|1:55:20       0|1:100:82
+13     23459007        rs1409028       T       C       .       PASS    AA=T;DP=135     GT:GQ:DP        0|0:100:39      1|1:55:21       0|1:100:74
+7      90110127        rs11563823      G       A       .       PASS    AA=G;DP=146     GT:GQ:DP        0|0:100:39      1|1:61:22       0|1:100:87
+20     22673487        rs6036204       A       G       .       PASS    AA=G;DP=137     GT:GQ:DP        0|0:100:39      1|1:64:24       0|1:100:72
+3      112735041       rs1948623       C       G       .       PASS    AA=G;DP=153     GT:GQ:DP        0|0:100:39      1|1:64:26       0|1:100:91
+4      157140184       .       G       C       .       PASS    AA=G;DP=139     GT:GQ:DP        0|0:100:39      1|1:67:25       0|1:100:78
+2      103539712       rs4599141       A       T       .       PASS    AA=T;DP=170     GT:GQ:DP        0|0:100:39      1|1:76:30       0|1:100:97
+2      54656402        .       A       C       .       PASS    AA=A;DP=185     GT:GQ:DP        0|0:100:39      1|1:79:28       0|1:100:66
+7      29615434        .       A       T       .       PASS    AA=A;DP=145     GT:GQ:DP        0|0:100:39      1|1:82:29       0|1:100:77
+2      78188593        rs12471665      A       G       .       PASS    AA=A;DP=159     GT:GQ:DP        0|0:100:39      1|1:85:32       0|1:100:88
+21     45675353        .       C       T       .       PASS    AA=T;DP=129     GT:GQ:DP        0|0:100:40      0|1:100:13      0|0:100:77
+11     8944926 rs2248245       G       A       .       PASS    AA=A;DP=140     GT:GQ:DP        0|0:100:40      0|1:100:14      0|0:100:87
+2      19427684        rs6706609       C       T       .       PASS    AA=C;DP=136     GT:GQ:DP        0|0:100:40      0|1:100:15      0|0:100:80
+2      121294111       rs7562959       A       G       .       PASS    AA=A;DP=103     GT:GQ:DP        0|0:100:40      0|1:100:16      0|0:100:39
+13     23757450        .       C       G       .       PASS    AA=C;DP=147     GT:GQ:DP        0|0:100:40      0|1:100:16      0|0:100:41
+3      15537242        .       G       A       .       PASS    AA=G;DP=143     GT:GQ:DP        0|0:100:40      0|1:100:16      0|0:100:89
+1      225986089       .       G       A       .       PASS    AA=G;DP=123     GT:GQ:DP        0|0:100:40      0|1:100:17      0|0:100:66
+6      31589505        rs2516398       G       T       .       PASS    AA=g;DP=136     GT:GQ:DP        0|0:100:40      0|1:100:17      0|0:100:78
+8      36779071        rs10105310      G       A       .       PASS    AA=A;DP=129     GT:GQ:DP        0|0:100:40      0|1:100:18      0|0:100:72
+7      129896699       .       G       A       .       PASS    AA=g;DP=117     GT:GQ:DP        0|0:100:40      0|1:100:20      0|0:100:57
+1      182459088       rs6696916       G       A       .       PASS    AA=G;DP=171;HM2;HM3     GT:GQ:DP        0|0:100:40      0|1:100:20      0|0:100:58
+9      4594813 .       T       C       .       PASS    AA=T;DP=143     GT:GQ:DP        0|0:100:40      0|1:100:20      0|0:100:85
+2      109072861       .       G       A       .       PASS    AA=G;DP=115     GT:GQ:DP        0|0:100:40      0|1:100:21      0|0:100:42
+1      30039556        rs716395        C       T       .       PASS    AA=c;DP=120;HM2 GT:GQ:DP        0|0:100:40      0|1:100:21      0|0:100:47
+1      78604535        .       T       C       .       PASS    AA=T;DP=134     GT:GQ:DP        0|0:100:40      0|1:100:21      0|0:100:76
+3      3287218 rs62228925      T       G       .       PASS    AA=T;DP=143     GT:GQ:DP        0|0:100:40      0|1:100:21      0|0:100:83
+15     53606200        .       C       A       .       PASS    AA=N;DP=148     GT:GQ:DP        0|0:100:40      0|1:100:21      0|0:100:88
+10     77423739        rs10824349      G       T       .       PASS    AA=G;DP=124     GT:GQ:DP        0|0:100:40      0|1:100:22      0|0:100:61
+2      242042556       rs2221385       A       G       .       PASS    AA=A;DP=155     GT:GQ:DP        0|0:100:40      0|1:100:23      0|0:100:51
+18     70206167        rs17089172      G       C       .       PASS    AA=C;DP=138     GT:GQ:DP        0|0:100:40      0|1:100:23      0|0:100:67
+7      45039749        .       C       T       .       PASS    AA=C;DP=134     GT:GQ:DP        0|0:100:40      0|1:100:23      0|0:100:73
+3      58592584        rs4681881       C       T       .       PASS    AA=C;DP=148     GT:GQ:DP        0|0:100:40      0|1:100:23      0|0:100:78
+21     31399704        .       G       A       .       PASS    AA=G;DP=143     GT:GQ:DP        0|0:100:40      0|1:100:23      0|0:100:79
+10     6268783 rs645680        G       A       .       PASS    AA=A;DP=124     GT:GQ:DP        0|0:100:40      0|1:100:24      0|0:100:59
+15     57669663        .       C       G       .       PASS    AA=G;DP=138     GT:GQ:DP        0|0:100:40      0|1:100:24      0|0:100:77
+3      4411172 rs794187        C       T       .       PASS    AA=T;DP=158     GT:GQ:DP        0|0:100:40      0|1:100:25      0|0:100:52
+11     65479046        .       C       T       .       PASS    AA=c;DP=164     GT:GQ:DP        0|0:100:40      0|1:100:25      0|0:100:56
+5      95189391        rs12109442      T       A       .       PASS    AA=T;DP=136     GT:GQ:DP        0|0:100:40      0|1:100:25      0|0:100:71
+15     95204927        rs8035259       C       T       .       PASS    AA=T;DP=133     GT:GQ:DP        0|0:100:40      0|1:100:25      0|0:100:72
+19     40419120        rs7256604       C       T       .       PASS    AA=C;DP=143     GT:GQ:DP        0|0:100:40      0|1:100:25      0|0:100:77
+12     127683917       rs1844324       A       G       .       PASS    AA=A;DP=154     GT:GQ:DP        0|0:100:40      0|1:100:25      0|0:100:88
+7      21771944        rs2286270       C       G       .       PASS    AA=c;DP=135     GT:GQ:DP        0|0:100:40      0|1:100:26      0|0:100:69
+6      139057178       .       G       A       .       PASS    AA=G;DP=139     GT:GQ:DP        0|0:100:40      0|1:100:26      0|0:100:76
+9      107529675       rs7854687       A       G       .       PASS    AA=A;DP=142     GT:GQ:DP        0|0:100:40      0|1:100:26      0|0:100:78
+2      26196041        rs6742226       T       C       .       PASS    AA=T;DP=154     GT:GQ:DP        0|0:100:40      0|1:100:27      0|0:100:86
+3      178403254       rs6443436       G       A       .       PASS    AA=G;DP=153     GT:GQ:DP        0|0:100:40      0|1:100:27      0|0:100:87
+5      176204241       .       T       C       .       PASS    AA=T;DP=170     GT:GQ:DP        0|0:100:40      0|1:100:28      0|0:100:63
+6      135938809       .       T       C       .       PASS    AA=T;DP=132     GT:GQ:DP        0|0:100:40      0|1:100:28      0|0:100:67
+9      73426732        .       A       G       .       PASS    AA=A;DP=155     GT:GQ:DP        0|0:100:40      0|1:100:28      0|0:100:85
+4      163616424       rs11931726      A       C       .       PASS    AA=N;DP=154     GT:GQ:DP        0|0:100:40      0|1:100:28      0|0:100:87
+17     9749863 .       C       G       .       PASS    AA=C;DP=171     GT:GQ:DP        0|0:100:40      0|1:100:29      0|0:100:59
+4      59510949        rs7663790       A       T       .       PASS    AA=A;DP=138     GT:GQ:DP        0|0:100:40      0|1:100:29      0|0:100:70
+8      134809888       .       G       A       .       PASS    AA=G;DP=143     GT:GQ:DP        0|0:100:40      0|1:100:29      0|0:100:74
+18     42246021        rs58048630      T       C       .       PASS    AA=C;DP=151     GT:GQ:DP        0|0:100:40      0|1:100:29      0|0:100:84
+1      243775428       .       G       T       .       PASS    AA=G;DP=151     GT:GQ:DP        0|0:100:40      0|1:100:29      0|0:100:86
+15     79010062        .       A       G       .       PASS    AA=A;DP=149     GT:GQ:DP        0|0:100:40      0|1:100:30      0|0:100:39
+1      243709549       rs10924208      A       T       .       PASS    AA=a;DP=141;HM2 GT:GQ:DP        0|0:100:40      0|1:100:31      0|0:100:69
+18     7091355 .       C       T       .       PASS    AA=C;DP=141     GT:GQ:DP        0|0:100:40      0|1:100:31      0|0:100:70
+1      62328411        .       C       A       .       PASS    AA=C;DP=159     GT:GQ:DP        0|0:100:40      0|1:100:31      0|0:100:77
+1      209734480       rs7527396       G       A       .       PASS    AA=G;DP=154;HM2 GT:GQ:DP        0|0:100:40      0|1:100:31      0|0:100:78
+7      129164354       .       A       G       .       PASS    AA=A;DP=152     GT:GQ:DP        0|0:100:40      0|1:100:31      0|0:100:82
+3      43377307        rs59121457      A       G       .       PASS    AA=A;DP=179     GT:GQ:DP        0|0:100:40      0|1:100:32      0|0:100:51
+8      69777973        .       G       A       .       PASS    AA=G;DP=140     GT:GQ:DP        0|0:100:40      0|1:100:32      0|0:100:71
+2      19362926        rs1628365       C       G       .       PASS    AA=C;DP=149     GT:GQ:DP        0|0:100:40      0|1:100:32      0|0:100:78
+20     46176902        .       T       C       .       PASS    AA=T;DP=160     GT:GQ:DP        0|0:100:40      0|1:100:33      0|0:100:52
+2      5125064 .       C       T       .       PASS    AA=C;DP=174     GT:GQ:DP        0|0:100:40      0|1:100:34      0|0:100:52
+18     6492770 rs62079232      A       C       .       PASS    AA=A;DP=127     GT:GQ:DP        0|0:100:40      0|1:100:34      0|0:100:53
+2      210062768       rs34128824      C       T       .       PASS    AA=c;DP=138     GT:GQ:DP        0|0:100:40      0|1:100:35      0|0:100:63
+13     28859436        rs7989530       C       A       .       PASS    AA=T;DP=166     GT:GQ:DP        0|0:100:40      0|1:100:35      0|0:100:90
+2      161561238       rs55646061      T       C       .       PASS    AA=T;DP=179     GT:GQ:DP        0|0:100:40      0|1:100:38      0|0:100:83
+11     87659624        rs217090        C       T       .       PASS    AA=C;DP=126     GT:GQ:DP        0|0:100:40      1|0:100:14      0|1:100:73
+17     55990761        .       C       T       .       PASS    AA=C;DP=161     GT:GQ:DP        0|0:100:40      1|0:100:15      0|1:100:60
+16     19831846        .       G       A       .       PASS    AA=G;DP=133     GT:GQ:DP        0|0:100:40      1|0:100:15      0|1:100:78
+1      199543456       .       C       T       .       PASS    AA=C;DP=135     GT:GQ:DP        0|0:100:40      1|0:100:16      0|1:100:73
+8      101510868       rs7007214       T       G       .       PASS    AA=G;DP=110     GT:GQ:DP        0|0:100:40      1|0:100:17      0|1:100:55
+2      46540834        .       G       A       .       PASS    AA=g;DP=148     GT:GQ:DP        0|0:100:40      1|0:100:17      0|1:100:89
+9      96903768        rs7029888       C       T       .       PASS    AA=C;DP=116     GT:GQ:DP        0|0:100:40      1|0:100:18      0|1:100:47
+4      55558094        .       A       C       .       PASS    AA=A;DP=119     GT:GQ:DP        0|0:100:40      1|0:100:20      0|1:100:59
+16     45481553        rs4967602       T       C       .       PASS    AA=T;DP=122     GT:GQ:DP        0|0:100:40      1|0:100:20      0|1:100:61
+20     61684603        .       G       A       .       PASS    AA=G;DP=126     GT:GQ:DP        0|0:100:40      1|0:100:20      0|1:100:66
+22     44374773        rs60899988      C       T       .       PASS    AA=C;DP=132     GT:GQ:DP        0|0:100:40      1|0:100:20      0|1:100:72
+9      106711480       rs10820743      T       C       .       PASS    AA=T;DP=147     GT:GQ:DP        0|0:100:40      1|0:100:20      0|1:100:89
+8      97086865        rs261563        G       C       .       PASS    AA=G;DP=142     GT:GQ:DP        0|0:100:40      1|0:100:21      0|1:100:82
+4      179848557       .       A       G       .       PASS    AA=A;DP=141     GT:GQ:DP        0|0:100:40      1|0:100:21      0|1:100:84
+1      231117723       rs61000534      G       T       .       PASS    AA=G;DP=117     GT:GQ:DP        0|0:100:40      1|0:100:22      0|1:100:54
+15     27509440        rs11072884      C       T       .       PASS    AA=C;DP=137     GT:GQ:DP        0|0:100:40      1|0:100:22      0|1:100:74
+2      127337433       .       A       G       .       PASS    AA=A;DP=136     GT:GQ:DP        0|0:100:40      1|0:100:22      0|1:100:74
+9      102019119       rs9408995       T       C       .       PASS    AA=T;DP=140     GT:GQ:DP        0|0:100:40      1|0:100:22      0|1:100:77
+2      133163773       rs2709529       T       A       .       PASS    AA=T;DP=148     GT:GQ:DP        0|0:100:40      1|0:100:23      0|1:100:87
+3      191032870       rs13087384      T       C       .       PASS    AA=T;DP=150     GT:GQ:DP        0|0:100:40      1|0:100:23      0|1:100:87
+4      141822133       rs13435167      A       T       .       PASS    AA=A;DP=156     GT:GQ:DP        0|0:100:40      1|0:100:24      0|1:100:52
+2      179472848       .       A       C       .       PASS    AA=A;DP=127     GT:GQ:DP        0|0:100:40      1|0:100:24      0|1:100:64
+1      212931746       rs335561        C       T       .       PASS    AA=G;DP=128;HM2;HM3     GT:GQ:DP        0|0:100:40      1|0:100:24      0|1:100:65
+22     18061522        rs13058576      G       A       .       PASS    AA=G;DP=149     GT:GQ:DP        0|0:100:40      1|0:100:24      0|1:100:86
+9      86283032        rs36027946      A       G       .       PASS    AA=G;DP=124     GT:GQ:DP        0|0:100:40      1|0:100:25      0|1:100:60
+4      81308051        rs10013777      C       G       .       PASS    AA=C;DP=136     GT:GQ:DP        0|0:100:40      1|0:100:25      0|1:100:67
+9      120822817       rs4836741       G       A       .       PASS    AA=A;DP=138     GT:GQ:DP        0|0:100:40      1|0:100:25      0|1:100:74
+2      115268253       rs12711805      T       G       .       PASS    AA=T;DP=124     GT:GQ:DP        0|0:100:40      1|0:100:26      0|1:100:60
+6      143357271       rs6922615       C       G       .       PASS    AA=C;DP=140     GT:GQ:DP        0|0:100:40      1|0:100:26      0|1:100:61
+2      17995902        rs11885293      G       A       .       PASS    AA=G;DP=157     GT:GQ:DP        0|0:100:40      1|0:100:26      0|1:100:92
+16     11882049        rs60924385      T       C       .       PASS    AA=T;DP=148     GT:GQ:DP        0|0:100:40      1|0:100:27      0|1:100:37
+5      30081404        rs2330308       T       A       .       PASS    AA=A;DP=127     GT:GQ:DP        0|0:100:40      1|0:100:27      0|1:100:64
+5      154925496       rs10039342      G       A       .       PASS    AA=A;DP=138     GT:GQ:DP        0|0:100:40      1|0:100:27      0|1:100:70
+18     46223426        rs58261061      T       A       .       PASS    AA=T;DP=151     GT:GQ:DP        0|0:100:40      1|0:100:28      0|1:100:85
+7      30678486        rs2284216       G       T       .       PASS    AA=G;DP=154     GT:GQ:DP        0|0:100:40      1|0:100:28      0|1:100:85
+5      170165650       .       C       A       .       PASS    AA=C;DP=145     GT:GQ:DP        0|0:100:40      1|0:100:29      0|1:100:76
+15     50030576        rs2554346       T       C       .       PASS    AA=T;DP=161     GT:GQ:DP        0|0:100:40      1|0:100:29      0|1:100:89
+6      32321188        rs454748        G       A       .       PASS    AA=A;DP=161     GT:GQ:DP        0|0:100:40      1|0:100:29      0|1:100:91
+4      52621986        rs784944        A       G       .       PASS    AA=G;DP=166     GT:GQ:DP        0|0:100:40      1|0:100:30      0|1:100:56
+15     89090409        rs6496722       T       C       .       PASS    AA=T;DP=128     GT:GQ:DP        0|0:100:40      1|0:100:30      0|1:100:59
+3      158628699       rs9289983       G       A       .       PASS    AA=A;DP=132     GT:GQ:DP        0|0:100:40      1|0:100:30      0|1:100:62
+1      87625052        .       C       T       .       PASS    AA=C;DP=145     GT:GQ:DP        0|0:100:40      1|0:100:30      0|1:100:73
+1      239973662       rs12074215      T       A       .       PASS    AA=T;DP=165;HM2;HM3     GT:GQ:DP        0|0:100:40      1|0:100:30      0|1:100:97
+4      41194886        .       G       A       .       PASS    AA=G;DP=141     GT:GQ:DP        0|0:100:40      1|0:100:31      0|1:100:72
+1      176265354       rs7555685       A       G       .       PASS    AA=G;DP=147;HM2;HM3     GT:GQ:DP        0|0:100:40      1|0:100:31      0|1:100:76
+7      98463149        rs61326484      C       A       .       PASS    AA=C;DP=139     GT:GQ:DP        0|0:100:40      1|0:100:32      0|1:100:67
+1      34720679        .       C       T       .       PASS    AA=C;DP=154     GT:GQ:DP        0|0:100:40      1|0:100:35      0|1:95:41
+9      114638665       rs10981516      C       G       .       PASS    AA=G;DP=151     GT:GQ:DP        0|0:100:40      1|0:100:37      0|1:100:75
+4      82603813        rs58844724      C       T       .       PASS    AA=C;DP=159     GT:GQ:DP        0|0:100:40      1|0:100:41      0|1:100:43
+5      155451052       rs7707018       G       A       .       PASS    AA=G;DP=170     GT:GQ:DP        0|0:100:40      1|0:100:42      0|1:100:90
+2      37830393        .       T       C       .       PASS    AA=t;DP=178     GT:GQ:DP        0|0:100:40      1|0:100:44      0|1:8:95
+14     21478430        .       T       C       .       PASS    AA=T;DP=162     GT:GQ:DP        0|0:100:40      1|0:100:48      0|1:100:75
+5      132999284       rs256213        C       T       .       PASS    AA=T;DP=117     GT:GQ:DP        0|0:100:40      1|0:3:15        0|1:100:49
+18     7748021 .       A       G       .       PASS    AA=G;DP=128     GT:GQ:DP        0|0:100:40      1|0:48:20       0|1:100:70
+1      48154949        rs982157        C       T       .       PASS    AA=C;DP=120;HM2 GT:GQ:DP        0|0:100:40      1|0:57:12       0|1:100:67
+8      25305780        rs7015833       A       G       .       PASS    AA=G;DP=117     GT:GQ:DP        0|0:100:40      1|0:61:17       0|1:100:61
+1      57414289        rs11802124      T       C       .       PASS    AA=T;DP=135;HM2 GT:GQ:DP        0|0:100:40      1|0:63:24       0|1:100:71
+18     58149780        .       C       G       .       PASS    AA=C;DP=168     GT:GQ:DP        0|0:100:40      1|0:65:31       0|1:100:53
+9      5999656 rs12341021      C       G       .       PASS    AA=C;DP=131     GT:GQ:DP        0|0:100:40      1|0:68:19       0|1:100:74
+1      43098131        rs11210734      A       G       .       PASS    AA=a;DP=136;HM2 GT:GQ:DP        0|0:100:40      1|0:69:24       0|1:100:73
+4      120106304       rs7699133       C       A       .       PASS    AA=A;DP=121     GT:GQ:DP        0|0:100:40      1|0:70:12       0|1:100:70
+6      11485425        rs6907518       C       T       .       PASS    AA=C;DP=108     GT:GQ:DP        0|0:100:40      1|0:73:18       0|1:100:43
+16     56076008        .       C       T       .       PASS    AA=C;DP=122     GT:GQ:DP        0|0:100:40      1|0:78:12       0|1:100:71
+3      158334835       rs4368453       C       T       .       PASS    AA=C;DP=135     GT:GQ:DP        0|0:100:40      1|0:79:23       0|1:100:75
+15     97317225        rs8025801       C       T       .       PASS    AA=C;DP=127     GT:GQ:DP        0|0:100:40      1|0:80:13       0|1:100:77
+11     93486971        rs7116300       G       A       .       PASS    AA=G;DP=125     GT:GQ:DP        0|0:100:40      1|0:88:21       0|1:100:65
+16     85738605        rs12929401      G       A       .       PASS    AA=G;DP=153     GT:GQ:DP        0|0:100:40      1|0:88:24       0|1:100:92
+12     103321490       rs17035530      T       C       .       PASS    AA=T;DP=153     GT:GQ:DP        0|0:100:40      1|0:91:30       0|1:100:84
+6      64656542        rs11751346      C       T       .       PASS    AA=c;DP=127     GT:GQ:DP        0|0:100:40      1|0:97:25       0|1:100:66
+1      191213455       rs7512241       G       A       .       PASS    AA=A;DP=140;HM2;HM3     GT:GQ:DP        0|0:100:40      1|1:100:42      0|1:100:58
+6      16014436        .       T       A       .       PASS    AA=N;DP=114     GT:GQ:DP        0|0:100:40      1|1:16:9        0|1:100:66
+15     97472501        rs2663105       C       T       .       PASS    AA=C;DP=127     GT:GQ:DP        0|0:100:40      1|1:19:8        0|1:100:79
+12     118153999       rs2727717       A       G       .       PASS    AA=A;DP=141     GT:GQ:DP        0|0:100:40      1|1:23:14       0|1:100:47
+3      46058205        rs13086534      T       G       .       PASS    AA=T;DP=136     GT:GQ:DP        0|0:100:40      1|1:33:24       0|1:100:69
+4      123930518       .       A       C       .       PASS    AA=A;DP=141     GT:GQ:DP        0|0:100:40      1|1:33:30       0|1:100:71
+9      137587676       rs7023309       T       C       .       PASS    AA=T;DP=126     GT:GQ:DP        0|0:100:40      1|1:37:14       0|1:100:70
+7      111298685       rs59747680      A       G       .       PASS    AA=A;DP=140     GT:GQ:DP        0|0:100:40      1|1:39:21       0|1:100:77
+2      101610220       rs11687570      C       A       .       PASS    AA=C;DP=134     GT:GQ:DP        0|0:100:40      1|1:40:16       0|1:100:76
+18     73138758        rs2717140       T       C       .       PASS    AA=C;DP=147     GT:GQ:DP        0|0:100:40      1|1:42:18       0|1:100:91
+20     25065199        rs7272141       A       C       .       PASS    AA=C;DP=105     GT:GQ:DP        0|0:100:40      1|1:44:17       0|1:100:48
+9      137086671       rs11103658      G       A       .       PASS    AA=G;DP=139     GT:GQ:DP        0|0:100:40      1|1:49:18       0|1:100:81
+15     64296396        rs58841004      G       A       .       PASS    AA=G;DP=118     GT:GQ:DP        0|0:100:40      1|1:49:21       0|1:100:48
+12     14895254        rs11056203      G       A       .       PASS    AA=G;DP=154     GT:GQ:DP        0|0:100:40      1|1:49:27       0|1:100:88
+1      43630884        .       G       A       .       PASS    AA=G;DP=129     GT:GQ:DP        0|0:100:40      1|1:58:27       0|1:100:60
+15     55553811        rs2934444       G       C       .       PASS    AA=C;DP=152     GT:GQ:DP        0|0:100:40      1|1:64:24       0|1:100:43
+4      137462800       rs7671084       T       A       .       PASS    AA=G;DP=150     GT:GQ:DP        0|0:100:40      1|1:64:24       0|1:100:81
+11     88073723        rs56749707      C       T       .       PASS    AA=C;DP=150     GT:GQ:DP        0|0:100:40      1|1:70:25       0|1:100:86
+15     48601526        rs3131603       T       C       .       PASS    AA=T;DP=149     GT:GQ:DP        0|0:100:40      1|1:70:26       0|1:100:83
+1      11408042        rs10864507      A       G       .       PASS    AA=A;DP=149     GT:GQ:DP        0|0:100:40      1|1:73:27       0|1:100:84
+2      34439692        rs1434147       G       T       .       PASS    AA=T;DP=123     GT:GQ:DP        0|0:100:40      1|1:75:33       0|1:100:48
+20     11295519        rs4813991       G       A       .       PASS    AA=G;DP=140     GT:GQ:DP        0|0:100:40      1|1:79:28       0|1:100:75
+7      38548772        rs2392582       C       T       .       PASS    AA=T;DP=144     GT:GQ:DP        0|0:100:40      1|1:79:29       0|1:100:33
+18     73293157        rs948718        A       G       .       PASS    AA=A;DP=128     GT:GQ:DP        0|0:100:40      1|1:79:29       0|1:100:61
+3      139572623       rs4678261       A       G       .       PASS    AA=A;DP=150     GT:GQ:DP        0|0:100:40      1|1:97:34       0|1:100:77
+5      178888420       .       G       C       .       PASS    AA=G;DP=130     GT:GQ:DP        0|0:100:41      0|1:100:14      0|0:100:74
+6      21801131        rs4712624       A       G       .       PASS    AA=A;DP=134     GT:GQ:DP        0|0:100:41      0|1:100:15      0|0:100:71
+13     28044548        rs11841412      G       A       .       PASS    AA=G;DP=131     GT:GQ:DP        0|0:100:41      0|1:100:15      0|0:100:74
+1      158137414       rs2501318       G       C       .       PASS    AA=G;DP=131;HM2 GT:GQ:DP        0|0:100:41      0|1:100:16      0|0:100:76
+2      231035822       .       T       G       .       PASS    AA=T;DP=130     GT:GQ:DP        0|0:100:41      0|1:100:16      0|0:100:77
+4      7666431 .       T       C       .       PASS    AA=N;DP=172     GT:GQ:DP        0|0:100:41      0|1:100:17      0|0:100:55
+17     71129669        .       G       C       .       PASS    AA=C;DP=134     GT:GQ:DP        0|0:100:41      0|1:100:17      0|0:100:78
+3      11796642        .       T       G       .       PASS    AA=T;DP=150     GT:GQ:DP        0|0:100:41      0|1:100:17      0|0:100:93
+10     132772806       rs4237470       G       A       .       PASS    AA=G;DP=120     GT:GQ:DP        0|0:100:41      0|1:100:18      0|0:100:61
+2      158106783       .       C       T       .       PASS    AA=C;DP=122     GT:GQ:DP        0|0:100:41      0|1:100:19      0|0:100:61
+7      86175860        .       C       T       .       PASS    AA=C;DP=121     GT:GQ:DP        0|0:100:41      0|1:100:19      0|0:100:63
+4      9584970 .       C       T       .       PASS    AA=C;DP=132     GT:GQ:DP        0|0:100:41      0|1:100:19      0|0:100:74
+22     49336403        rs41281531      G       A       .       PASS    AA=G;DP=144     GT:GQ:DP        0|0:100:41      0|1:100:19      0|0:100:83
+5      95991613        rs155044        C       T       .       PASS    AA=C;DP=140     GT:GQ:DP        0|0:100:41      0|1:100:19      0|0:97:37
+7      116286098       .       A       G       .       PASS    AA=G;DP=123     GT:GQ:DP        0|0:100:41      0|1:100:20      0|0:100:66
+14     43114973        rs7151492       T       C       .       PASS    AA=C;DP=131     GT:GQ:DP        0|0:100:41      0|1:100:20      0|0:100:70
+16     86114191        .       C       T       .       PASS    AA=C;DP=137     GT:GQ:DP        0|0:100:41      0|1:100:20      0|0:100:79
+14     95276737        rs1951990       C       T       .       PASS    AA=C;DP=141     GT:GQ:DP        0|0:100:41      0|1:100:20      0|0:100:81
+6      37621923        rs7774013       A       G       .       PASS    AA=a;DP=151     GT:GQ:DP        0|0:100:41      0|1:100:21      0|0:100:89
+12     123743705       rs12579740      C       T       .       PASS    AA=C;DP=156     GT:GQ:DP        0|0:100:41      0|1:100:21      0|0:98:41
+2      10426215        rs6753925       T       C       .       PASS    AA=C;DP=121     GT:GQ:DP        0|0:100:41      0|1:100:22      0|0:100:55
+16     81454053        .       A       G       .       PASS    AA=A;DP=151     GT:GQ:DP        0|0:100:41      0|1:100:22      0|0:100:78
+2      108241630       rs2219078       G       A       .       PASS    AA=g;DP=145     GT:GQ:DP        0|0:100:41      0|1:100:22      0|0:100:82
+5      33345971        rs13182969      G       A       .       PASS    AA=G;DP=166     GT:GQ:DP        0|0:100:41      0|1:100:23      0|0:100:54
+10     3862876 rs10904103      C       T       .       PASS    AA=T;DP=138     GT:GQ:DP        0|0:100:41      0|1:100:23      0|0:100:73
+9      131009377       rs7856501       C       T       .       PASS    AA=C;DP=151     GT:GQ:DP        0|0:100:41      0|1:100:24      0|0:100:46
+7      38325481        rs2534567       C       A       .       PASS    AA=C;DP=162     GT:GQ:DP        0|0:100:41      0|1:100:24      0|0:100:50
+4      71438043        rs3864162       A       G       .       PASS    AA=A;DP=142     GT:GQ:DP        0|0:100:41      0|1:100:25      0|0:100:71
+21     29510783        rs28578249      G       A       .       PASS    AA=G;DP=146     GT:GQ:DP        0|0:100:41      0|1:100:25      0|0:100:80
+6      133164810       .       C       T       .       PASS    AA=c;DP=156     GT:GQ:DP        0|0:100:41      0|1:100:27      0|0:100:42
+7      38623401        rs28393755      C       T       .       PASS    AA=C;DP=147     GT:GQ:DP        0|0:100:41      0|1:100:27      0|0:100:67
+2      39450235        rs55961227      G       C       .       PASS    AA=G;DP=141     GT:GQ:DP        0|0:100:41      0|1:100:27      0|0:100:73
+11     126011922       rs4937166       C       T       .       PASS    AA=c;DP=147     GT:GQ:DP        0|0:100:41      0|1:100:27      0|0:100:81
+10     73465088        .       C       T       .       PASS    AA=C;DP=158     GT:GQ:DP        0|0:100:41      0|1:100:27      0|0:100:91
+13     46956401        rs17070149      G       A       .       PASS    AA=G;DP=182     GT:GQ:DP        0|0:100:41      0|1:100:28      0|0:100:59
+13     39846209        .       T       G       .       PASS    AA=T;DP=179     GT:GQ:DP        0|0:100:41      0|1:100:28      0|0:100:68
+10     82239140        .       A       G       .       PASS    AA=A;DP=189     GT:GQ:DP        0|0:100:41      0|1:100:28      0|0:100:72
+10     44972585        rs3780893       A       G       .       PASS    AA=a;DP=150     GT:GQ:DP        0|0:100:41      0|1:100:28      0|0:100:81
+9      99528388        .       C       T       .       PASS    AA=C;DP=160     GT:GQ:DP        0|0:100:41      0|1:100:29      0|0:100:50
+20     59472081        rs13433309      G       T       .       PASS    AA=T;DP=147     GT:GQ:DP        0|0:100:41      0|1:100:29      0|0:100:75
+15     85932767        rs35643848      G       T       .       PASS    AA=G;DP=168     GT:GQ:DP        0|0:100:41      0|1:100:29      0|0:100:88
+12     93617711        rs56240845      C       T       .       PASS    AA=T;DP=188     GT:GQ:DP        0|0:100:41      0|1:100:30      0|0:100:57
+1      68224976        rs9326078       A       G       .       PASS    AA=G;DP=160;HM2;HM3     GT:GQ:DP        0|0:100:41      0|1:100:30      0|0:100:87
+8      132889718       .       T       C       .       PASS    AA=T;DP=179     GT:GQ:DP        0|0:100:41      0|1:100:31      0|0:100:59
+3      72069583        rs6809759       G       A       .       PASS    AA=G;DP=152     GT:GQ:DP        0|0:100:41      0|1:100:31      0|0:100:83
+8      102784226       rs7842527       T       C       .       PASS    AA=t;DP=137     GT:GQ:DP        0|0:100:41      0|1:100:32      0|0:100:63
+8      145738008       rs57677584      A       G       .       PASS    AA=G;DP=151     GT:GQ:DP        0|0:100:41      0|1:100:32      0|0:100:79
+2      221668113       rs55959439      C       T       .       PASS    AA=C;DP=160     GT:GQ:DP        0|0:100:41      0|1:100:33      0|0:100:41
+8      21123373        .       A       C       .       PASS    AA=A;DP=182     GT:GQ:DP        0|0:100:41      0|1:100:35      0|0:100:60
+3      126154328       rs60985940      T       C       .       PASS    AA=T;DP=159     GT:GQ:DP        0|0:100:41      0|1:100:37      0|0:100:83
+2      68431562        rs13033725      C       G       .       PASS    AA=C;DP=166     GT:GQ:DP        0|0:100:41      0|1:100:40      0|0:100:88
+5      173719898       rs10055377      T       C       .       PASS    AA=T;DP=182     GT:GQ:DP        0|0:100:41      0|1:100:42      0|0:100:55
+4      103609844       .       T       C       .       PASS    AA=T;DP=165     GT:GQ:DP        0|0:100:41      1|0:100:16      0|1:100:54
+8      2011812 rs3817698       G       A       .       PASS    AA=G;DP=126     GT:GQ:DP        0|0:100:41      1|0:100:17      0|1:100:66
+5      31719637        rs10073278      T       A       .       PASS    AA=T;DP=133     GT:GQ:DP        0|0:100:41      1|0:100:18      0|1:100:77
+8      56110700        rs2726440       A       G       .       PASS    AA=A;DP=131     GT:GQ:DP        0|0:100:41      1|0:100:19      0|1:100:71
+18     48958078        .       A       G       .       PASS    AA=A;DP=136     GT:GQ:DP        0|0:100:41      1|0:100:19      0|1:100:80
+11     71141724        rs7117703       T       C       .       PASS    AA=.;DP=132     GT:GQ:DP        0|0:100:41      1|0:100:20      0|1:100:59
+1      111957730       rs11102315      C       T       .       PASS    AA=C;DP=126     GT:GQ:DP        0|0:100:41      1|0:100:21      0|1:100:64
+2      73611371        .       C       T       .       PASS    AA=C;DP=163     GT:GQ:DP        0|0:100:41      1|0:100:22      0|1:100:100
+21     33428176        rs2834098       C       T       .       PASS    AA=C;DP=144     GT:GQ:DP        0|0:100:41      1|0:100:22      0|1:100:83
+13     98847209        .       A       G       .       PASS    AA=A;DP=149     GT:GQ:DP        0|0:100:41      1|0:100:22      0|1:100:84
+17     75725494        rs2028551       G       A       .       PASS    AA=G;DP=151     GT:GQ:DP        0|0:100:41      1|0:100:22      0|1:100:91
+7      63726630        rs13234148      C       G       .       PASS    AA=c;DP=130     GT:GQ:DP        0|0:100:41      1|0:100:23      0|1:100:65
+2      86922338        rs1803262       G       A       .       PASS    AA=G;DP=136     GT:GQ:DP        0|0:100:41      1|0:100:23      0|1:100:74
+14     95637236        .       A       T       .       PASS    AA=A;DP=141     GT:GQ:DP        0|0:100:41      1|0:100:23      0|1:100:76
+12     117836551       rs7138230       A       C       .       PASS    AA=C;DP=155     GT:GQ:DP        0|0:100:41      1|0:100:23      0|1:100:90
+6      154088164       .       C       T       .       PASS    AA=C;DP=140     GT:GQ:DP        0|0:100:41      1|0:100:24      0|1:100:41
+10     53875602        rs12250301      A       G       .       PASS    AA=G;DP=139     GT:GQ:DP        0|0:100:41      1|0:100:24      0|1:100:77
+8      36946051        rs16885597      A       G       .       PASS    AA=A;DP=122     GT:GQ:DP        0|0:100:41      1|0:100:25      0|1:100:42
+2      242571665       rs56026116      T       G       .       PASS    AA=.;DP=132     GT:GQ:DP        0|0:100:41      1|0:100:25      0|1:100:65
+12     52415159        rs12227447      C       T       .       PASS    AA=C;DP=169     GT:GQ:DP        0|0:100:41      1|0:100:26      0|1:100:47
+6      53616224        rs6458949       G       T       .       PASS    AA=T;DP=141     GT:GQ:DP        0|0:100:41      1|0:100:27      0|1:100:73
+4      7773378 rs57302113      C       T       .       PASS    AA=C;DP=148     GT:GQ:DP        0|0:100:41      1|0:100:27      0|1:100:83
+3      109221375       .       C       T       .       PASS    AA=C;DP=159     GT:GQ:DP        0|0:100:41      1|0:100:28      0|1:100:51
+13     48293313        .       T       C       .       PASS    AA=T;DP=155     GT:GQ:DP        0|0:100:41      1|0:100:28      0|1:100:86
+16     69411522        rs61023651      C       T       .       PASS    AA=c;DP=166     GT:GQ:DP        0|0:100:41      1|0:100:28      0|1:70:58
+6      75981750        .       G       C       .       PASS    AA=G;DP=156     GT:GQ:DP        0|0:100:41      1|0:100:29      0|1:100:86
+8      40981394        .       A       G       .       PASS    AA=A;DP=163     GT:GQ:DP        0|0:100:41      1|0:100:31      0|1:100:91
+10     115276972       .       C       T       .       PASS    AA=C;DP=129     GT:GQ:DP        0|0:100:41      1|0:100:32      0|1:100:57
+5      88509689        .       C       G       .       PASS    AA=C;DP=150     GT:GQ:DP        0|0:100:41      1|0:100:32      0|1:100:74
+7      131512353       .       C       T       .       PASS    AA=C;DP=151     GT:GQ:DP        0|0:100:41      1|0:100:32      0|1:100:79
+1      230058543       .       C       T       .       PASS    AA=C;DP=161     GT:GQ:DP        0|0:100:41      1|0:100:32      0|1:100:88
+12     32255018        rs17529021      A       G       .       PASS    AA=A;DP=150     GT:GQ:DP        0|0:100:41      1|0:100:33      0|1:100:74
+2      170974250       .       T       C       .       PASS    AA=t;DP=145     GT:GQ:DP        0|0:100:41      1|0:100:34      0|1:100:70
+13     93771824        .       C       T       .       PASS    AA=C;DP=153     GT:GQ:DP        0|0:100:41      1|0:100:35      0|1:100:80
+1      169319286       rs7054006       G       A       .       PASS    AA=G;DP=167     GT:GQ:DP        0|0:100:41      1|0:100:35      0|1:100:89
+2      172813725       rs10930538      T       C       .       PASS    AA=T;DP=181     GT:GQ:DP        0|0:100:41      1|0:100:37      0|1:100:61
+6      28229807        rs6908414       A       G       .       PASS    AA=A;DP=168     GT:GQ:DP        0|0:100:41      1|0:100:38      0|1:100:53
+17     60871776        .       A       G       .       PASS    AA=A;DP=123     GT:GQ:DP        0|0:100:41      1|0:30:18       0|1:100:63
+9      138513680       rs11574910      C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        0|0:100:41      1|0:38:10       0|1:100:48
+7      150156812       rs4725367       T       C       .       PASS    AA=T;DP=153     GT:GQ:DP        0|0:100:41      1|0:59:27       0|1:100:45
+2      217730653       rs10210184      C       T       .       PASS    AA=C;DP=143     GT:GQ:DP        0|0:100:41      1|0:65:18       0|1:100:84
+5      10545268        .       G       A       .       PASS    AA=G;DP=139     GT:GQ:DP        0|0:100:41      1|0:69:17       0|1:100:82
+11     66433145        .       G       A       .       PASS    AA=g;DP=162     GT:GQ:DP        0|0:100:41      1|0:77:17       0|1:100:62
+19     20865000        rs60156891      C       G       .       PASS    AA=-;DP=166     GT:GQ:DP        0|0:100:41      1|0:79:25       0|1:100:99
+16     10311911        rs11074725      C       T       .       PASS    AA=C;DP=112     GT:GQ:DP        0|0:100:41      1|0:82:9        0|1:100:62
+17     32033012        .       C       T       .       PASS    AA=C;DP=118     GT:GQ:DP        0|0:100:41      1|0:83:10       0|1:100:67
+3      160291276       .       G       A       .       PASS    AA=G;DP=139     GT:GQ:DP        0|0:100:41      1|0:85:16       0|1:100:82
+9      118467172       rs60796176      T       C       .       PASS    AA=T;DP=140     GT:GQ:DP        0|0:100:41      1|0:93:16       0|1:100:82
+6      73440351        rs7749079       A       T       .       PASS    AA=A;DP=135     GT:GQ:DP        0|0:100:41      1|0:94:22       0|1:100:71
+10     85863926        rs11511526      C       A       .       PASS    AA=C;DP=119     GT:GQ:DP        0|0:100:41      1|0:95:19       0|1:100:62
+1      104105385       rs28723613      C       T       .       PASS    AA=c;DP=142     GT:GQ:DP        0|0:100:41      1|1:12:14       0|1:100:86
+10     1368928 rs4880823       G       A       .       PASS    AA=A;DP=108     GT:GQ:DP        0|0:100:41      1|1:28:22       0|1:100:37
+1      204361511       rs28726332      T       C       .       PASS    AA=C;DP=169     GT:GQ:DP        0|0:100:41      1|1:30:25       0|1:100:103
+8      28775555        .       C       G       .       PASS    AA=C;DP=128     GT:GQ:DP        0|0:100:41      1|1:32:21       0|1:100:54
+2      190853519       rs1876877       G       A       .       PASS    AA=G;DP=106     GT:GQ:DP        0|0:100:41      1|1:37:14       0|1:100:50
+10     6218350 rs10400165      T       C       .       PASS    AA=T;DP=127     GT:GQ:DP        0|0:100:41      1|1:40:15       0|1:100:60
+1      24352231        rs4649192       C       T       .       PASS    AA=c;DP=154     GT:GQ:DP        0|0:100:41      1|1:43:17       0|1:100:91
+14     76502325        rs2080577       T       C       .       PASS    AA=N;DP=113     GT:GQ:DP        0|0:100:41      1|1:49:18       0|1:100:55
+4      6217256 rs4689352       A       G       .       PASS    AA=G;DP=117     GT:GQ:DP        0|0:100:41      1|1:49:19       0|1:100:59
+1      17522383        rs10888024      A       G       .       PASS    AA=A;DP=145;HM2 GT:GQ:DP        0|0:100:41      1|1:49:20       0|1:100:85
+6      136156224       .       G       A       .       PASS    AA=G;DP=151     GT:GQ:DP        0|0:100:41      1|1:51:27       0|1:100:86
+19     11479783        rs8111571       T       C       .       PASS    AA=C;DP=121     GT:GQ:DP        0|0:100:41      1|1:52:19       0|1:100:54
+7      105640218       rs4366009       C       A       .       PASS    AA=.;DP=159     GT:GQ:DP        0|0:100:41      1|1:53:36       0|1:100:82
+5      163238149       rs290136        C       A       .       PASS    AA=A;DP=114     GT:GQ:DP        0|0:100:41      1|1:55:20       0|1:100:53
+8      72715524        rs58781162      C       T       .       PASS    AA=T;DP=122     GT:GQ:DP        0|0:100:41      1|1:55:20       0|1:100:63
+2      224651581       rs6752318       T       C       .       PASS    AA=T;DP=136     GT:GQ:DP        0|0:100:41      1|1:58:21       0|1:100:74
+X      1853702 .       A       G       .       PASS    AA=.;DP=118     GT:GQ:DP        0|0:100:41      1|1:61:25       0|1:100:50
+12     4116512 rs759310        A       G       .       PASS    AA=A;DP=162     GT:GQ:DP        0|0:100:41      1|1:61:30       0|1:100:43
+5      55238567        rs10070892      T       C       .       PASS    AA=T;DP=156     GT:GQ:DP        0|0:100:41      1|1:70:26       0|1:100:93
+3      156609889       .       A       T       .       PASS    AA=A;DP=167     GT:GQ:DP        0|0:100:41      1|1:70:26       0|1:100:97
+14     96548535        rs856238        G       A       .       PASS    AA=G;DP=151     GT:GQ:DP        0|0:100:41      1|1:73:28       0|1:100:84
+1      71571991        rs2174602       A       G       .       PASS    AA=A;DP=141;HM2 GT:GQ:DP        0|0:100:41      1|1:88:31       0|1:100:67
+22     49512720        .       G       A       .       PASS    AA=G;DP=129     GT:GQ:DP        0|0:100:42      0|1:100:11      0|0:100:79
+17     14721902        rs2159379       C       T       .       PASS    AA=T;DP=125     GT:GQ:DP        0|0:100:42      0|1:100:16      0|0:100:68
+11     80187072        rs1588665       G       A       .       PASS    AA=G;DP=130     GT:GQ:DP        0|0:100:42      0|1:100:16      0|0:100:69
+8      22504637        .       G       T       .       PASS    AA=T;DP=155     GT:GQ:DP        0|0:100:42      0|1:100:17      0|0:100:52
+2      45494964        .       G       A       .       PASS    AA=A;DP=119     GT:GQ:DP        0|0:100:42      0|1:100:18      0|0:100:65
+2      9772203 .       A       G       .       PASS    AA=A;DP=127     GT:GQ:DP        0|0:100:42      0|1:100:18      0|0:100:69
+2      169784917       .       T       C       .       PASS    AA=T;DP=147     GT:GQ:DP        0|0:100:42      0|1:100:21      0|0:100:39
+10     47110175        rs11814290      G       A       .       PASS    AA=.;DP=124     GT:GQ:DP        0|0:100:42      0|1:100:21      0|0:100:47
+19     47478407        .       G       A       .       PASS    AA=G;DP=147     GT:GQ:DP        0|0:100:42      0|1:100:21      0|0:100:83
+22     23541027        .       A       G       .       PASS    AA=A;DP=147     GT:GQ:DP        0|0:100:42      0|1:100:21      0|0:100:84
+18     45969342        rs12966211      G       C       .       PASS    AA=G;DP=136     GT:GQ:DP        0|0:100:42      0|1:100:23      0|0:100:72
+3      184622623       .       C       T       .       PASS    AA=T;DP=158     GT:GQ:DP        0|0:100:42      0|1:100:23      0|0:100:95
+12     104899661       rs35272873      T       A       .       PASS    AA=T;DP=145     GT:GQ:DP        0|0:100:42      0|1:100:25      0|0:100:37
+2      24323524        .       C       G       .       PASS    AA=C;DP=156     GT:GQ:DP        0|0:100:42      0|1:100:25      0|0:100:80
+17     33265133        rs60001512      T       C       .       PASS    AA=T;DP=148     GT:GQ:DP        0|0:100:42      0|1:100:25      0|0:100:84
+12     126107315       .       A       G       .       PASS    AA=N;DP=149     GT:GQ:DP        0|0:100:42      0|1:100:26      0|0:100:36
+1      12091541        rs11569866      C       T       .       PASS    AA=C;DP=158;HM2 GT:GQ:DP        0|0:100:42      0|1:100:26      0|0:100:45
+8      1808063 rs3735866       G       T       .       PASS    AA=g;DP=125     GT:GQ:DP        0|0:100:42      0|1:100:26      0|0:100:59
+16     22951459        .       G       A       .       PASS    AA=G;DP=138     GT:GQ:DP        0|0:100:42      0|1:100:26      0|0:100:70
+6      155803877       rs6557420       G       T       .       PASS    AA=C;DP=141     GT:GQ:DP        0|0:100:42      0|1:100:26      0|0:100:70
+6      31502258        .       T       C       .       PASS    AA=N;DP=142     GT:GQ:DP        0|0:100:42      0|1:100:26      0|0:100:76
+7      100774904       rs35671197      C       A       .       PASS    AA=A;DP=165     GT:GQ:DP        0|0:100:42      0|1:100:27      0|0:100:50
+19     48411455        .       G       A       .       PASS    AA=g;DP=136     GT:GQ:DP        0|0:100:42      0|1:100:27      0|0:100:67
+3      73202852        rs7622321       C       T       .       PASS    AA=C;DP=140     GT:GQ:DP        0|0:100:42      0|1:100:27      0|0:100:71
+8      138790564       rs13263092      A       G       .       PASS    AA=G;DP=171     GT:GQ:DP        0|0:100:42      0|1:100:28      0|0:100:58
+10     111491313       rs4917543       G       A       .       PASS    AA=G;DP=175     GT:GQ:DP        0|0:100:42      0|1:100:29      0|0:100:103
+6      149524101       rs56222993      T       C       .       PASS    AA=T;DP=146     GT:GQ:DP        0|0:100:42      0|1:100:29      0|0:100:36
+8      67280213        .       T       C       .       PASS    AA=T;DP=173     GT:GQ:DP        0|0:100:42      0|1:100:29      0|0:100:45
+12     9215406 .       C       T       .       PASS    AA=c;DP=170     GT:GQ:DP        0|0:100:42      0|1:100:29      0|0:100:46
+1      223445029       rs4319288       A       G       .       PASS    AA=A;DP=168     GT:GQ:DP        0|0:100:42      0|1:100:30      0|0:100:56
+1      166888951       .       G       A       .       PASS    AA=G;DP=142     GT:GQ:DP        0|0:100:42      0|1:100:31      0|0:100:70
+6      128964301       rs9388656       C       A       .       PASS    AA=C;DP=162     GT:GQ:DP        0|0:100:42      0|1:100:31      0|0:100:92
+3      39404080        rs11129824      G       C       .       PASS    AA=G;DP=168     GT:GQ:DP        0|0:100:42      0|1:100:32      0|0:100:44
+3      199081441       .       C       T       .       PASS    AA=C;DP=148     GT:GQ:DP        0|0:100:42      0|1:100:32      0|0:100:78
+11     95148032        rs12275378      T       C       .       PASS    AA=T;DP=164     GT:GQ:DP        0|0:100:42      0|1:100:32      0|0:100:93
+2      16680249        rs971942        G       A       .       PASS    AA=g;DP=163     GT:GQ:DP        0|0:100:42      0|1:100:34      0|0:100:86
+5      169462619       .       T       A       .       PASS    AA=T;DP=167     GT:GQ:DP        0|0:100:42      0|1:100:34      0|0:100:92
+13     26955086        rs1535640       T       C       .       PASS    AA=C;DP=151     GT:GQ:DP        0|0:100:42      0|1:100:35      0|0:100:75
+18     8735959 .       T       C       .       PASS    AA=T;DP=174     GT:GQ:DP        0|0:100:42      0|1:100:35      0|0:100:94
+11     122412106       rs11218933      G       T       .       PASS    AA=G;DP=144     GT:GQ:DP        0|0:100:42      1|0:100:13      0|1:100:89
+12     12691718        rs7131825       G       A       .       PASS    AA=G;DP=119     GT:GQ:DP        0|0:100:42      1|0:100:16      0|1:100:61
+7      54482745        .       C       T       .       PASS    AA=C;DP=106     GT:GQ:DP        0|0:100:42      1|0:100:17      0|1:100:38
+7      23105679        .       G       A       .       PASS    AA=G;DP=125     GT:GQ:DP        0|0:100:42      1|0:100:20      0|1:100:65
+9      38369798        rs61448043      A       G       .       PASS    AA=A;DP=153     GT:GQ:DP        0|0:100:42      1|0:100:20      0|1:100:93
+15     57205199        rs28739024      C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        0|0:100:42      1|0:100:21      0|1:100:57
+14     74859324        .       A       G       .       PASS    AA=A;DP=152     GT:GQ:DP        0|0:100:42      1|0:100:21      0|1:100:77
+5      63949924        .       C       T       .       PASS    AA=c;DP=130     GT:GQ:DP        0|0:100:42      1|0:100:22      0|1:100:64
+2      25272893        rs34721891      T       C       .       PASS    AA=T;DP=137     GT:GQ:DP        0|0:100:42      1|0:100:23      0|1:100:73
+1      154751372       rs60702931      C       A       .       PASS    AA=C;DP=143     GT:GQ:DP        0|0:100:42      1|0:100:23      0|1:100:78
+13     44671124        rs61949174      A       T       .       PASS    AA=A;DP=113     GT:GQ:DP        0|0:100:42      1|0:100:24      0|1:100:39
+10     26401352        rs12267078      G       A       .       PASS    AA=G;DP=122     GT:GQ:DP        0|0:100:42      1|0:100:24      0|1:100:45
+4      83918884        .       T       G       .       PASS    AA=T;DP=166     GT:GQ:DP        0|0:100:42      1|0:100:24      0|1:100:58
+2      230861206       .       A       G       .       PASS    AA=A;DP=160     GT:GQ:DP        0|0:100:42      1|0:100:24      0|1:100:92
+10     22756142        rs7904821       C       T       .       PASS    AA=C;DP=171     GT:GQ:DP        0|0:100:42      1|0:100:25      0|1:100:86
+8      74510373        .       G       A       .       PASS    AA=G;DP=129     GT:GQ:DP        0|0:100:42      1|0:100:26      0|1:100:66
+8      59965216        rs10092649      C       A       .       PASS    AA=C;DP=108     GT:GQ:DP        0|0:100:42      1|0:100:27      0|1:100:33
+18     46434840        rs10432203      A       C       .       PASS    AA=A;DP=130     GT:GQ:DP        0|0:100:42      1|0:100:27      0|1:100:59
+16     73862832        rs4888368       C       A       .       PASS    AA=C;DP=135     GT:GQ:DP        0|0:100:42      1|0:100:27      0|1:100:68
+11     130136818       rs948084        A       C       .       PASS    AA=A;DP=146     GT:GQ:DP        0|0:100:42      1|0:100:27      0|1:100:78
+16     77423313        .       T       C       .       PASS    AA=T;DP=150     GT:GQ:DP        0|0:100:42      1|0:100:28      0|1:100:39
+15     95343910        .       T       C       .       PASS    AA=T;DP=167     GT:GQ:DP        0|0:100:42      1|0:100:28      0|1:100:55
+18     32233118        .       C       G       .       PASS    AA=C;DP=151     GT:GQ:DP        0|0:100:42      1|0:100:29      0|1:100:80
+16     8091110 .       C       T       .       PASS    AA=C;DP=140     GT:GQ:DP        0|0:100:42      1|0:100:30      0|1:100:69
+5      38046310        rs1567325       C       G       .       PASS    AA=C;DP=148     GT:GQ:DP        0|0:100:42      1|0:100:30      0|1:100:74
+2      45251485        rs4952748       A       T       .       PASS    AA=A;DP=150     GT:GQ:DP        0|0:100:42      1|0:100:30      0|1:100:77
+3      132147789       rs2685174       C       T       .       PASS    AA=C;DP=153     GT:GQ:DP        0|0:100:42      1|0:100:31      0|1:100:83
+8      125797742       rs10956200      A       G       .       PASS    AA=A;DP=164     GT:GQ:DP        0|0:100:42      1|0:100:31      0|1:100:91
+5      95121711        rs10046014      C       T       .       PASS    AA=C;DP=165     GT:GQ:DP        0|0:100:42      1|0:100:32      0|1:100:88
+19     9390071 .       T       G       .       PASS    AA=T;DP=166     GT:GQ:DP        0|0:100:42      1|0:100:32      0|1:100:94
+16     6589949 .       A       T       .       PASS    AA=A;DP=171     GT:GQ:DP        0|0:100:42      1|0:100:32      0|1:100:97
+16     9559026 rs16965567      A       G       .       PASS    AA=A;DP=173     GT:GQ:DP        0|0:100:42      1|0:100:33      0|1:100:54
+11     26674658        .       T       C       .       PASS    AA=T;DP=153     GT:GQ:DP        0|0:100:42      1|0:100:35      0|1:100:63
+13     109310690       .       T       C       .       PASS    AA=T;DP=161     GT:GQ:DP        0|0:100:42      1|0:100:38      0|1:100:82
+6      163955619       rs60478553      C       T       .       PASS    AA=C;DP=154     GT:GQ:DP        0|0:100:42      1|0:100:41      0|1:100:72
+4      107169474       rs11936196      G       C       .       PASS    AA=G;DP=120     GT:GQ:DP        0|0:100:42      1|0:67:19       0|1:100:57
+7      35326391        .       C       T       .       PASS    AA=C;DP=125     GT:GQ:DP        0|0:100:42      1|0:69:19       0|1:100:67
+18     18329262        rs58391360      A       G       .       PASS    AA=G;DP=124     GT:GQ:DP        0|0:100:42      1|0:86:16       0|1:100:64
+17     24037595        rs16964503      C       T       .       PASS    AA=T;DP=144     GT:GQ:DP        0|0:100:42      1|0:88:31       0|1:100:71
+5      81906788        .       C       T       .       PASS    AA=C;DP=146     GT:GQ:DP        0|0:100:42      1|0:95:25       0|1:100:41
+10     102725825       rs735137        C       G       .       PASS    AA=t;DP=123     GT:GQ:DP        0|0:100:42      1|0:9:20        0|1:100:62
+3      110314600       rs4855578       T       C       .       PASS    AA=C;DP=157     GT:GQ:DP        0|0:100:42      1|1:100:39      0|1:100:72
+11     60971628        rs1377456       G       A       .       PASS    AA=G;DP=182     GT:GQ:DP        0|0:100:42      1|1:100:43      0|1:100:94
+22     26378932        rs134029        A       C       .       PASS    AA=N;DP=119     GT:GQ:DP        0|0:100:42      1|1:18:13       0|1:100:65
+16     11396230        rs10163274      A       C       .       PASS    AA=A;DP=136     GT:GQ:DP        0|0:100:42      1|1:36:24       0|1:100:71
+16     13546439        rs1894380       A       G       .       PASS    AA=A;DP=130     GT:GQ:DP        0|0:100:42      1|1:47:23       0|1:100:64
+4      62081533        rs6813884       A       G       .       PASS    AA=A;DP=135     GT:GQ:DP        0|0:100:42      1|1:49:19       0|1:100:71
+5      154438098       rs1319694       A       G       .       PASS    AA=G;DP=127     GT:GQ:DP        0|0:100:42      1|1:55:21       0|1:100:67
+3      17763906        rs11927769      C       T       .       PASS    AA=C;DP=143     GT:GQ:DP        0|0:100:42      1|1:55:21       0|1:100:79
+8      23107161        .       G       C       .       PASS    AA=G;DP=145     GT:GQ:DP        0|0:100:42      1|1:61:28       0|1:100:78
+11     75018835        rs11236471      G       A       .       PASS    AA=G;DP=172     GT:GQ:DP        0|0:100:42      1|1:88:32       0|1:100:53
+16     8809565 rs7197116       A       T       .       PASS    AA=A;DP=127     GT:GQ:DP        0|0:100:43      0|1:100:15      0|0:100:66
+9      7121412 rs7037720       G       A       .       PASS    AA=A;DP=132     GT:GQ:DP        0|0:100:43      0|1:100:17      0|0:100:73
+1      177676785       rs6693527       C       T       .       PASS    AA=C;DP=151     GT:GQ:DP        0|0:100:43      0|1:100:17      0|0:100:88
+1      243831880       rs57119269      A       G       .       PASS    AA=A;DP=154     GT:GQ:DP        0|0:100:43      0|1:100:19      0|0:100:92
+11     44305629        rs34219482      C       G       .       PASS    AA=C;DP=158     GT:GQ:DP        0|0:100:43      0|1:100:20      0|0:100:45
+8      30955712        .       A       G       .       PASS    AA=A;DP=138     GT:GQ:DP        0|0:100:43      0|1:100:20      0|0:100:76
+4      105673726       .       C       T       .       PASS    AA=C;DP=137     GT:GQ:DP        0|0:100:43      0|1:100:21      0|0:100:71
+7      11786149        .       G       A       .       PASS    AA=G;DP=135     GT:GQ:DP        0|0:100:43      0|1:100:21      0|0:100:71
+1      244018454       .       C       T       .       PASS    AA=C;DP=142     GT:GQ:DP        0|0:100:43      0|1:100:22      0|0:100:78
+9      86120797        rs12335576      C       T       .       PASS    AA=C;DP=133     GT:GQ:DP        0|0:100:43      0|1:100:23      0|0:100:59
+16     73409523        .       G       A       .       PASS    AA=G;DP=139     GT:GQ:DP        0|0:100:43      0|1:100:23      0|0:100:74
+7      67356968        .       T       C       .       PASS    AA=T;DP=141     GT:GQ:DP        0|0:100:43      0|1:100:23      0|0:100:75
+2      179642854       rs11883598      G       A       .       PASS    AA=A;DP=154     GT:GQ:DP        0|0:100:43      0|1:100:23      0|0:100:88
+1      110644635       rs12743266      T       A       .       PASS    AA=T;DP=149     GT:GQ:DP        0|0:100:43      0|1:100:24      0|0:100:41
+8      119496775       rs4876414       C       G       .       PASS    AA=C;DP=142     GT:GQ:DP        0|0:100:43      0|1:100:24      0|0:100:72
+8      81278658        rs6989939       A       G       .       PASS    AA=A;DP=147     GT:GQ:DP        0|0:100:43      0|1:100:24      0|0:100:80
+1      53366462        rs899975        C       T       .       PASS    AA=c;DP=138     GT:GQ:DP        0|0:100:43      0|1:100:25      0|0:100:73
+10     29521594        rs10490901      A       G       .       PASS    AA=A;DP=159     GT:GQ:DP        0|0:100:43      0|1:100:25      0|0:100:93
+10     101069378       rs7896183       A       G       .       PASS    AA=A;DP=142     GT:GQ:DP        0|0:100:43      0|1:100:26      0|0:100:72
+4      38660107        rs11936324      C       T       .       PASS    AA=C;DP=153     GT:GQ:DP        0|0:100:43      0|1:100:26      0|0:100:80
+10     12665070        rs7910588       C       G       .       PASS    AA=c;DP=177     GT:GQ:DP        0|0:100:43      0|1:100:27      0|0:100:52
+11     8673579 rs2270956       C       T       .       PASS    AA=T;DP=171     GT:GQ:DP        0|0:100:43      0|1:100:27      0|0:100:56
+8      59078014        .       G       A       .       PASS    AA=G;DP=131     GT:GQ:DP        0|0:100:43      0|1:100:27      0|0:100:61
+14     25403476        .       A       G       .       PASS    AA=A;DP=139     GT:GQ:DP        0|0:100:43      0|1:100:27      0|0:100:71
+5      102690524       .       G       A       .       PASS    AA=C;DP=138     GT:GQ:DP        0|0:100:43      0|1:100:28      0|0:100:70
+4      124952755       rs1433216       G       A       .       PASS    AA=A;DP=155     GT:GQ:DP        0|0:100:43      0|1:100:28      0|0:100:86
+2      239845340       rs62182096      T       G       .       PASS    AA=T;DP=171     GT:GQ:DP        0|0:100:43      0|1:100:30      0|0:100:60
+5      99672465        rs1699941       T       C       .       PASS    AA=T;DP=139     GT:GQ:DP        0|0:100:43      0|1:100:30      0|0:100:66
+1      222928093       rs56310058      C       G       .       PASS    AA=C;DP=152     GT:GQ:DP        0|0:100:43      0|1:100:30      0|0:100:77
+8      102330980       rs1529604       C       T       .       PASS    AA=C;DP=162     GT:GQ:DP        0|0:100:43      0|1:100:32      0|0:100:45
+22     34929361        .       A       T       .       PASS    AA=-;DP=168     GT:GQ:DP        0|0:100:43      0|1:100:32      0|0:100:49
+21     41739800        rs469390        G       A       .       PASS    AA=g;DP=178     GT:GQ:DP        0|0:100:43      0|1:100:33      0|0:100:54
+1      215726675       rs7552965       G       A       .       PASS    AA=G;DP=148;HM2 GT:GQ:DP        0|0:100:43      0|1:100:33      0|0:100:76
+3      103080467       .       A       T       .       PASS    AA=A;DP=152     GT:GQ:DP        0|0:100:43      0|1:100:36      0|0:100:77
+10     24728991        rs10508673      C       T       .       PASS    AA=C;DP=142     GT:GQ:DP        0|0:100:43      1|0:100:18      0|1:100:80
+7      26484752        rs28718109      A       G       .       PASS    AA=G;DP=134     GT:GQ:DP        0|0:100:43      1|0:100:20      0|1:100:72
+19     35642699        rs8110123       A       C       .       PASS    AA=a;DP=149     GT:GQ:DP        0|0:100:43      1|0:100:21      0|1:100:85
+8      11091936        .       G       C       .       PASS    AA=G;DP=147     GT:GQ:DP        0|0:100:43      1|0:100:23      0|1:100:79
+7      44200053        .       C       T       .       PASS    AA=C;DP=149     GT:GQ:DP        0|0:100:43      1|0:100:24      0|1:100:81
+2      7464963 rs6734352       G       A       .       PASS    AA=G;DP=151     GT:GQ:DP        0|0:100:43      1|0:100:25      0|1:100:82
+11     120512963       rs651365        A       C       .       PASS    AA=A;DP=159     GT:GQ:DP        0|0:100:43      1|0:100:25      0|1:100:90
+22     37485175        rs60835434      T       C       .       PASS    AA=T;DP=156     GT:GQ:DP        0|0:100:43      1|0:100:26      0|1:100:49
+10     14098934        rs7911614       T       A       .       PASS    AA=T;DP=131     GT:GQ:DP        0|0:100:43      1|0:100:26      0|1:100:64
+7      126989378       rs17151018      A       C       .       PASS    AA=A;DP=149     GT:GQ:DP        0|0:100:43      1|0:100:26      0|1:100:81
+12     26134099        .       G       T       .       PASS    AA=g;DP=152     GT:GQ:DP        0|0:100:43      1|0:100:26      0|1:100:83
+12     52867881        rs3087404       T       C       .       PASS    AA=T;DP=165     GT:GQ:DP        0|0:100:43      1|0:100:26      0|1:100:94
+5      145071728       rs1654134       G       A       .       PASS    AA=g;DP=157     GT:GQ:DP        0|0:100:43      1|0:100:27      0|1:100:77
+3      138034743       rs4533585       G       A       .       PASS    AA=G;DP=161     GT:GQ:DP        0|0:100:43      1|0:100:28      0|1:100:48
+9      115546395       .       G       A       .       PASS    AA=G;DP=145     GT:GQ:DP        0|0:100:43      1|0:100:28      0|1:100:73
+4      32251557        rs4608850       G       A       .       PASS    AA=G;DP=154     GT:GQ:DP        0|0:100:43      1|0:100:28      0|1:100:87
+7      5202789 .       C       G       .       PASS    AA=C;DP=140     GT:GQ:DP        0|0:100:43      1|0:100:30      0|1:100:69
+8      27783207        rs7814675       T       C       .       PASS    AA=T;DP=149     GT:GQ:DP        0|0:100:43      1|0:100:31      0|1:100:72
+17     62177518        rs8070561       G       A       .       PASS    AA=A;DP=170     GT:GQ:DP        0|0:100:43      1|0:100:31      0|1:100:98
+1      218735257       .       A       C       .       PASS    AA=A;DP=147     GT:GQ:DP        0|0:100:43      1|0:100:34      0|1:100:70
+1      8908763 .       C       T       .       PASS    AA=-;DP=166     GT:GQ:DP        0|0:100:43      1|0:100:35      0|1:100:91
+5      159309948       .       G       A       .       PASS    AA=G;DP=129     GT:GQ:DP        0|0:100:43      1|0:45:13       0|1:100:71
+13     49002250        rs55788913      G       A       .       PASS    AA=G;DP=129     GT:GQ:DP        0|0:100:43      1|0:63:20       0|1:100:65
+2      170259085       rs3820952       A       G       .       PASS    AA=G;DP=145     GT:GQ:DP        0|0:100:43      1|0:68:16       0|1:100:85
+8      142154553       rs10092056      C       T       .       PASS    AA=C;DP=126     GT:GQ:DP        0|0:100:43      1|0:78:14       0|1:100:66
+15     99210512        rs8031647       C       T       .       PASS    AA=c;DP=140     GT:GQ:DP        0|0:100:43      1|0:80:23       0|1:100:75
+17     6909787 rs732428        C       T       .       PASS    AA=C;DP=156     GT:GQ:DP        0|0:100:43      1|0:82:19       0|1:100:91
+16     68316635        .       A       G       .       PASS    AA=A;DP=149     GT:GQ:DP        0|0:100:43      1|0:82:20       0|1:100:87
+5      74300316        rs7716518       T       C       .       PASS    AA=C;DP=146     GT:GQ:DP        0|0:100:43      1|0:87:25       0|1:100:80
+18     6138480 rs58682342      G       A       .       PASS    AA=A;DP=116     GT:GQ:DP        0|0:100:43      1|0:89:18       0|1:100:57
+4      102087815       rs13122430      C       T       .       PASS    AA=C;DP=103     GT:GQ:DP        0|0:100:43      1|0:96:13       0|1:100:48
+2      208672476       rs10198963      A       G       .       PASS    AA=a;DP=135     GT:GQ:DP        0|0:100:43      1|1:43:16       0|1:100:76
+1      35502122        rs479745        A       C       .       PASS    AA=C;DP=143     GT:GQ:DP        0|0:100:43      1|1:44:23       0|1:100:81
+19     18905977        rs58230872      G       A       .       PASS    AA=G;DP=164     GT:GQ:DP        0|0:100:43      1|1:46:17       0|1:100:106
+6      154390502       rs1074287       A       G       .       PASS    AA=G;DP=138     GT:GQ:DP        0|0:100:43      1|1:49:18       0|1:100:77
+7      3666186 rs57444839      T       C       .       PASS    AA=T;DP=142     GT:GQ:DP        0|0:100:43      1|1:52:21       0|1:100:79
+14     72439343        rs1861158       G       A       .       PASS    AA=G;DP=134     GT:GQ:DP        0|0:100:43      1|1:70:25       0|1:100:57
+1      117068202       rs699731        C       T       .       PASS    AA=C;DP=149;HM2 GT:GQ:DP        0|0:100:43      1|1:70:25       0|1:100:84
+2      157204288       rs13012636      C       G       .       PASS    AA=G;DP=154     GT:GQ:DP        0|0:100:43      1|1:73:26       0|1:100:88
+12     65129060        rs58531557      T       C       .       PASS    AA=t;DP=152     GT:GQ:DP        0|0:100:43      1|1:79:28       0|1:100:84
+9      136473049       rs4842196       C       A       .       PASS    AA=C;DP=165     GT:GQ:DP        0|0:100:44      0|1:100:18      0|0:100:104
+21     26371834        rs59737592      C       T       .       PASS    AA=c;DP=124     GT:GQ:DP        0|0:100:44      0|1:100:18      0|0:100:62
+5      176081882       rs7704230       A       G       .       PASS    AA=A;DP=132     GT:GQ:DP        0|0:100:44      0|1:100:18      0|0:100:71
+16     465441  .       G       A       .       PASS    AA=G;DP=134     GT:GQ:DP        0|0:100:44      0|1:100:18      0|0:100:73
+5      153866657       rs34401272      C       T       .       PASS    AA=C;DP=152     GT:GQ:DP        0|0:100:44      0|1:100:19      0|0:100:87
+10     69602884        rs4518986       T       G       .       PASS    AA=T;DP=156     GT:GQ:DP        0|0:100:44      0|1:100:21      0|0:100:45
+8      55036634        .       T       C       .       PASS    AA=T;DP=144     GT:GQ:DP        0|0:100:44      0|1:100:21      0|0:77:32
+1      44813569        .       A       G       .       PASS    AA=A;DP=164     GT:GQ:DP        0|0:100:44      0|1:100:23      0|0:100:53
+2      10640559        rs10929679      C       T       .       PASS    AA=T;DP=134     GT:GQ:DP        0|0:100:44      0|1:100:23      0|0:100:67
+3      140694100       .       G       A       .       PASS    AA=G;DP=147     GT:GQ:DP        0|0:100:44      0|1:100:23      0|0:100:80
+5      151833318       rs28722636      C       A       .       PASS    AA=C;DP=156     GT:GQ:DP        0|0:100:44      0|1:100:23      0|0:100:90
+15     76058861        .       G       A       .       PASS    AA=.;DP=152     GT:GQ:DP        0|0:100:44      0|1:100:24      0|0:100:83
+2      171868679       rs7564482       C       T       .       PASS    AA=C;DP=161     GT:GQ:DP        0|0:100:44      0|1:100:24      0|0:100:95
+11     115293772       .       G       A       .       PASS    AA=G;DP=151     GT:GQ:DP        0|0:100:44      0|1:100:25      0|0:100:44
+9      119310620       rs544893        G       A       .       PASS    AA=G;DP=148     GT:GQ:DP        0|0:100:44      0|1:100:25      0|0:100:74
+6      111327419       .       C       T       .       PASS    AA=C;DP=146     GT:GQ:DP        0|0:100:44      0|1:100:26      0|0:100:74
+11     47961741        rs13328902      C       T       .       PASS    AA=C;DP=136     GT:GQ:DP        0|0:100:44      0|1:100:27      0|0:100:66
+10     85702597        rs11528364      T       G       .       PASS    AA=G;DP=160     GT:GQ:DP        0|0:100:44      0|1:100:27      0|0:100:90
+2      26001319        .       C       T       .       PASS    AA=C;DP=163     GT:GQ:DP        0|0:100:44      0|1:100:28      0|0:100:48
+14     65595025        rs10131880      C       T       .       PASS    AA=T;DP=124     GT:GQ:DP        0|0:100:44      0|1:100:28      0|0:100:52
+15     76226320        rs16969548      T       C       .       PASS    AA=T;DP=168     GT:GQ:DP        0|0:100:44      0|1:100:28      0|0:100:97
+14     94940642        .       C       T       .       PASS    AA=C;DP=174     GT:GQ:DP        0|0:100:44      0|1:100:29      0|0:100:61
+3      191688299       .       C       T       .       PASS    AA=c;DP=148     GT:GQ:DP        0|0:100:44      0|1:100:29      0|0:100:73
+4      185952318       rs7686479       T       C       .       PASS    AA=T;DP=184     GT:GQ:DP        0|0:100:44      0|1:100:31      0|0:100:59
+8      74158895        .       G       A       .       PASS    AA=G;DP=148     GT:GQ:DP        0|0:100:44      0|1:100:31      0|0:100:61
+6      641753  .       G       A       .       PASS    AA=A;DP=173     GT:GQ:DP        0|0:100:44      0|1:100:32      0|0:100:53
+5      156972177       .       G       A       .       PASS    AA=G;DP=169     GT:GQ:DP        0|0:100:44      0|1:100:33      0|0:100:90
+8      124655486       rs2385296       A       C       .       PASS    AA=A;DP=138     GT:GQ:DP        0|0:100:44      0|1:100:36      0|0:100:62
+1      203448231       .       A       C       .       PASS    AA=A;DP=154     GT:GQ:DP        0|0:100:44      0|1:100:37      0|0:100:73
+5      53154416        rs58335515      A       G       .       PASS    AA=A;DP=148     GT:GQ:DP        0|0:100:44      1|0:100:18      0|1:100:46
+7      28345817        .       G       A       .       PASS    AA=G;DP=129     GT:GQ:DP        0|0:100:44      1|0:100:18      0|1:100:55
+2      9438662 .       A       G       .       PASS    AA=A;DP=136     GT:GQ:DP        0|0:100:44      1|0:100:18      0|1:100:73
+6      43998933        rs1776722       G       T       .       PASS    AA=G;DP=185     GT:GQ:DP        0|0:100:44      1|0:100:23      0|1:100:118
+3      198909307       .       C       T       .       PASS    AA=C;DP=140     GT:GQ:DP        0|0:100:44      1|0:100:23      0|1:100:73
+6      28432736        rs213235        G       A       .       PASS    AA=G;DP=136     GT:GQ:DP        0|0:100:44      1|0:100:24      0|1:100:58
+9      89614630        rs12346603      C       G       .       PASS    AA=c;DP=152     GT:GQ:DP        0|0:100:44      1|0:100:24      0|1:100:85
+3      53626622        .       A       G       .       PASS    AA=A;DP=159     GT:GQ:DP        0|0:100:44      1|0:100:25      0|1:100:45
+3      45186091        rs9819089       C       T       .       PASS    AA=T;DP=154     GT:GQ:DP        0|0:100:44      1|0:100:25      0|1:100:86
+3      149059400       rs1603837       T       C       .       PASS    AA=T;DP=127     GT:GQ:DP        0|0:100:44      1|0:100:26      0|1:100:57
+13     68280404        .       T       C       .       PASS    AA=T;DP=143     GT:GQ:DP        0|0:100:44      1|0:100:26      0|1:100:70
+8      141582425       .       T       C       .       PASS    AA=T;DP=155     GT:GQ:DP        0|0:100:44      1|0:100:26      0|1:100:84
+7      47196953        .       C       T       .       PASS    AA=C;DP=167     GT:GQ:DP        0|0:100:44      1|0:100:26      0|1:100:98
+7      27239372        rs58045581      T       A       .       PASS    AA=T;DP=172     GT:GQ:DP        0|0:100:44      1|0:100:27      0|1:100:103
+11     128035012       rs61907827      T       C       .       PASS    AA=T;DP=166     GT:GQ:DP        0|0:100:44      1|0:100:27      0|1:100:95
+1      199798707       .       C       T       .       PASS    AA=C;DP=180     GT:GQ:DP        0|0:100:44      1|0:100:28      0|1:100:55
+4      85337136        rs6825533       T       C       .       PASS    AA=t;DP=138     GT:GQ:DP        0|0:100:44      1|0:100:28      0|1:100:57
+5      31509134        rs3806846       A       G       .       PASS    AA=A;DP=139     GT:GQ:DP        0|0:100:44      1|0:100:28      0|1:100:69
+12     30873666        rs7977609       T       A       .       PASS    AA=t;DP=153     GT:GQ:DP        0|0:100:44      1|0:100:28      0|1:100:82
+6      24329946        rs11966291      G       C       .       PASS    AA=G;DP=158     GT:GQ:DP        0|0:100:44      1|0:100:28      0|1:100:85
+8      141342772       .       T       C       .       PASS    AA=T;DP=148     GT:GQ:DP        0|0:100:44      1|0:100:30      0|1:100:76
+4      188713307       .       T       A       .       PASS    AA=T;DP=149     GT:GQ:DP        0|0:100:44      1|0:100:32      0|1:100:75
+2      33366087        rs11124313      G       T       .       PASS    AA=G;DP=157     GT:GQ:DP        0|0:100:44      1|0:100:34      0|1:100:37
+3      198754461       .       A       G       .       PASS    AA=A;DP=144     GT:GQ:DP        0|0:100:44      1|0:67:18       0|1:100:82
+1      89280739        .       C       T       .       PASS    AA=c;DP=143     GT:GQ:DP        0|0:100:44      1|0:76:21       0|1:100:80
+5      179551567       rs11249682      C       T       .       PASS    AA=C;DP=129     GT:GQ:DP        0|0:100:44      1|0:77:14       0|1:100:72
+11     3602692 rs7115278       C       T       .       PASS    AA=T;DP=126     GT:GQ:DP        0|0:100:44      1|0:77:19       0|1:100:63
+18     44462869        .       G       A       .       PASS    AA=g;DP=150     GT:GQ:DP        0|0:100:44      1|0:77:35       0|1:100:71
+11     68731439        rs11228558      C       T       .       PASS    AA=c;DP=133     GT:GQ:DP        0|0:100:44      1|0:84:20       0|1:100:69
+2      239904957       .       T       A       .       PASS    AA=T;DP=167     GT:GQ:DP        0|0:100:44      1|0:86:18       0|1:100:63
+21     37124513        rs7276082       G       C       .       PASS    AA=G;DP=155     GT:GQ:DP        0|0:100:44      1|0:88:15       0|1:100:91
+14     99892317        .       A       T       .       PASS    AA=A;DP=153     GT:GQ:DP        0|0:100:44      1|0:98:25       0|1:100:86
+15     67182225        rs56388038      A       G       .       PASS    AA=A;DP=137     GT:GQ:DP        0|0:100:44      1|0:99:17       0|1:100:76
+11     36363678        rs404079        C       T       .       PASS    AA=C;DP=161     GT:GQ:DP        0|0:100:44      1|1:100:39      0|1:100:78
+3      88149806        rs35040143      C       T       .       PASS    AA=C;DP=129     GT:GQ:DP        0|0:100:44      1|1:31:23       0|1:100:56
+22     48667348        rs6009917       G       A       .       PASS    AA=G;DP=146     GT:GQ:DP        0|0:100:44      1|1:41:23       0|1:100:77
+15     37194070        rs12323962      T       G       .       PASS    AA=G;DP=122     GT:GQ:DP        0|0:100:44      1|1:43:17       0|1:100:62
+10     87993248        .       C       T       .       PASS    AA=C;DP=173     GT:GQ:DP        0|0:100:44      1|1:44:25       0|1:100:97
+1      166114853       rs203843        T       A       .       PASS    AA=A;DP=149;HM2 GT:GQ:DP        0|0:100:44      1|1:52:20       0|1:100:83
+21     46048287        rs2839000       T       C       .       PASS    AA=t;DP=137     GT:GQ:DP        0|0:100:44      1|1:55:21       0|1:100:73
+3      13492384        rs2597508       A       G       .       PASS    AA=G;DP=126     GT:GQ:DP        0|0:100:44      1|1:58:21       0|1:100:51
+4      83878052        rs951500        T       C       .       PASS    AA=T;DP=132     GT:GQ:DP        0|0:100:44      1|1:58:23       0|1:100:67
+2      42175057        rs59392156      G       A       .       PASS    AA=G;DP=154     GT:GQ:DP        0|0:100:44      1|1:61:22       0|1:100:76
+5      151566482       rs1363691       T       C       .       PASS    AA=t;DP=157     GT:GQ:DP        0|0:100:44      1|1:67:24       0|1:100:77
+5      140022232       .       A       C       .       PASS    AA=A;DP=152     GT:GQ:DP        0|0:100:44      1|1:82:36       0|1:100:72
+22     29352590        rs12169610      C       T       .       PASS    AA=C;DP=138     GT:GQ:DP        0|0:100:45      0|1:100:17      0|0:100:77
+13     97973014        rs6491429       A       G       .       PASS    AA=G;DP=164     GT:GQ:DP        0|0:100:45      0|1:100:19      0|0:100:103
+8      143475784       .       G       A       .       PASS    AA=G;DP=152     GT:GQ:DP        0|0:100:45      0|1:100:19      0|0:100:44
+20     4853216 .       G       C       .       PASS    AA=-;DP=163     GT:GQ:DP        0|0:100:45      0|1:100:19      0|0:100:60
+8      1047772 rs9774105       T       C       .       PASS    AA=t;DP=164     GT:GQ:DP        0|0:100:45      0|1:100:21      0|0:100:99
+17     69111523        rs28531368      C       T       .       PASS    AA=C;DP=147     GT:GQ:DP        0|0:100:45      0|1:100:22      0|0:100:81
+8      28152265        rs7012030       C       T       .       PASS    AA=C;DP=149     GT:GQ:DP        0|0:100:45      0|1:100:22      0|0:100:82
+3      148057128       rs17372663      C       A       .       PASS    AA=A;DP=180     GT:GQ:DP        0|0:100:45      0|1:100:24      0|0:100:62
+12     77860030        rs10778320      G       T       .       PASS    AA=g;DP=143     GT:GQ:DP        0|0:100:45      0|1:100:24      0|0:100:76
+8      54793268        .       A       G       .       PASS    AA=A;DP=164     GT:GQ:DP        0|0:100:45      0|1:100:24      0|0:100:94
+1      43019512        .       G       A       .       PASS    AA=G;DP=136     GT:GQ:DP        0|0:100:45      0|1:100:25      0|0:100:67
+17     50621011        rs244332        C       T       .       PASS    AA=C;DP=142     GT:GQ:DP        0|0:100:45      0|1:100:25      0|0:100:76
+17     74834923        .       T       G       .       PASS    AA=T;DP=175     GT:GQ:DP        0|0:100:45      0|1:100:26      0|0:100:48
+5      135467782       .       T       C       .       PASS    AA=T;DP=139     GT:GQ:DP        0|0:100:45      0|1:100:28      0|0:100:63
+1      59323974        .       T       A       .       PASS    AA=T;DP=156     GT:GQ:DP        0|0:100:45      0|1:100:29      0|0:100:36
+2      152234030       .       G       C       .       PASS    AA=G;DP=149     GT:GQ:DP        0|0:100:45      0|1:100:30      0|0:100:77
+5      6148811 .       A       G       .       PASS    AA=A;DP=190     GT:GQ:DP        0|0:100:45      0|1:100:32      0|0:100:66
+8      22062654        rs56377219      A       C       .       PASS    AA=C;DP=153     GT:GQ:DP        0|0:100:45      0|1:100:32      0|0:100:77
+14     33923127        .       T       C       .       PASS    AA=T;DP=182     GT:GQ:DP        0|0:100:45      0|1:100:36      0|0:100:50
+6      134474270       .       T       C       .       PASS    AA=C;DP=124     GT:GQ:DP        0|0:100:45      1|0:100:15      0|1:100:52
+15     65688351        .       A       G       .       PASS    AA=A;DP=155     GT:GQ:DP        0|0:100:45      1|0:100:17      0|1:100:95
+5      154785512       rs61485057      C       T       .       PASS    AA=C;DP=121     GT:GQ:DP        0|0:100:45      1|0:100:18      0|1:100:58
+11     119411423       rs11605106      G       A       .       PASS    AA=G;DP=142     GT:GQ:DP        0|0:100:45      1|0:100:20      0|1:100:76
+1      35947357        rs4652889       A       G       .       PASS    AA=A;DP=157;HM3 GT:GQ:DP        0|0:100:45      1|0:100:22      0|1:100:90
+1      152018205       .       C       G       .       PASS    AA=C;DP=147     GT:GQ:DP        0|0:100:45      1|0:100:23      0|1:100:80
+15     69618355        rs11072297      C       T       .       PASS    AA=C;DP=144     GT:GQ:DP        0|0:100:45      1|0:100:26      0|1:100:75
+2      216677516       rs6715229       A       G       .       PASS    AA=A;DP=145     GT:GQ:DP        0|0:100:45      1|0:100:27      0|1:100:75
+11     126293260       rs1628588       G       C       .       PASS    AA=G;DP=163     GT:GQ:DP        0|0:100:45      1|0:100:27      0|1:100:88
+12     40691394        rs1732340       T       A       .       PASS    AA=N;DP=136     GT:GQ:DP        0|0:100:45      1|0:100:29      0|1:100:61
+1      26087455        rs61179488      C       T       .       PASS    AA=C;DP=165     GT:GQ:DP        0|0:100:45      1|0:100:30      0|1:100:89
+2      198719700       .       G       A       .       PASS    AA=g;DP=167     GT:GQ:DP        0|0:100:45      1|0:100:32      0|1:100:90
+15     54135069        rs62046440      C       A       .       PASS    AA=C;DP=175     GT:GQ:DP        0|0:100:45      1|0:100:33      0|1:100:57
+1      59131307        rs59816047      C       T       .       PASS    AA=C;DP=137     GT:GQ:DP        0|0:100:45      1|0:100:35      0|1:100:58
+10     12976787        rs2399915       G       T       .       PASS    AA=G;DP=167     GT:GQ:DP        0|0:100:45      1|0:100:37      0|1:100:86
+7      45191417        rs12702123      T       A       .       PASS    AA=T;DP=150     GT:GQ:DP        0|0:100:45      1|0:53:11       0|1:100:52
+20     30190894        rs60078843      C       T       .       PASS    AA=C;DP=133     GT:GQ:DP        0|0:100:45      1|0:77:23       0|1:100:65
+5      132962469       .       G       A       .       PASS    AA=G;DP=159     GT:GQ:DP        0|0:100:45      1|0:83:22       0|1:100:51
+19     2081923 rs12609282      A       G       .       PASS    AA=A;DP=130     GT:GQ:DP        0|0:100:45      1|0:85:10       0|1:100:75
+2      36715792        rs35827924      G       T       .       PASS    AA=.;DP=132     GT:GQ:DP        0|0:100:45      1|1:25:25       0|1:100:63
+9      5123665 rs7035251       T       A       .       PASS    AA=A;DP=134     GT:GQ:DP        0|0:100:45      1|1:52:20       0|1:100:69
+4      27302994        rs1961033       A       C       .       PASS    AA=C;DP=147     GT:GQ:DP        0|0:100:45      1|1:58:22       0|1:100:80
+10     95964198        rs10882405      T       C       .       PASS    AA=T;DP=158     GT:GQ:DP        0|0:100:45      1|1:61:23       0|1:100:94
+5      132156543       rs803140        G       C       .       PASS    AA=G;DP=164     GT:GQ:DP        0|0:100:45      1|1:64:25       0|1:100:96
+12     109106926       rs55929416      C       T       .       PASS    AA=T;DP=154     GT:GQ:DP        0|0:100:45      1|1:91:32       0|1:100:77
+11     34169941        .       C       T       .       PASS    AA=C;DP=151     GT:GQ:DP        0|0:100:46      0|1:100:18      0|0:100:91
+3      119907069       .       G       A       .       PASS    AA=G;DP=147     GT:GQ:DP        0|0:100:46      0|1:100:21      0|0:100:79
+4      89844450        rs1804080       G       C       .       PASS    AA=G;DP=159     GT:GQ:DP        0|0:100:46      0|1:100:23      0|0:100:92
+1      97867612        rs1337522       G       A       .       PASS    AA=G;DP=155;HM2;HM3     GT:GQ:DP        0|0:100:46      0|1:100:28      0|0:100:84
+10     2854543 .       T       C       .       PASS    AA=T;DP=158     GT:GQ:DP        0|0:100:46      0|1:100:28      0|0:100:88
+18     72561477        .       A       G       .       PASS    AA=A;DP=173     GT:GQ:DP        0|0:100:46      0|1:100:31      0|0:100:43
+6      112693929       .       C       T       .       PASS    AA=C;DP=173     GT:GQ:DP        0|0:100:46      0|1:100:32      0|0:100:50
+10     23900602        .       T       A       .       PASS    AA=T;DP=148     GT:GQ:DP        0|0:100:46      0|1:100:33      0|0:100:57
+13     48068604        rs7325924       T       G       .       PASS    AA=T;DP=154     GT:GQ:DP        0|0:100:46      0|1:100:33      0|0:100:64
+15     77080581        rs11631671      C       T       .       PASS    AA=T;DP=137     GT:GQ:DP        0|0:100:46      1|0:100:12      0|1:100:79
+3      52820404        .       T       C       .       PASS    AA=C;DP=144     GT:GQ:DP        0|0:100:46      1|0:100:14      0|1:100:81
+7      3533915 .       G       A       .       PASS    AA=g;DP=156     GT:GQ:DP        0|0:100:46      1|0:100:23      0|1:100:88
+20     36176320        rs2345383       C       T       .       PASS    AA=C;DP=156     GT:GQ:DP        0|0:100:46      1|0:100:24      0|1:100:85
+14     34650902        rs1980513       T       G       .       PASS    AA=G;DP=150     GT:GQ:DP        0|0:100:46      1|0:100:25      0|1:100:80
+5      132819653       rs59424123      G       A       .       PASS    AA=G;DP=159     GT:GQ:DP        0|0:100:46      1|0:100:27      0|1:100:91
+10     34983453        rs59902196      T       C       .       PASS    AA=T;DP=146     GT:GQ:DP        0|0:100:46      1|0:100:28      0|1:100:73
+17     59558292        rs11655020      G       A       .       PASS    AA=G;DP=146     GT:GQ:DP        0|0:100:46      1|0:100:29      0|1:100:62
+22     27270754        rs60463879      G       C       .       PASS    AA=G;DP=159     GT:GQ:DP        0|0:100:46      1|0:100:30      0|1:100:81
+4      17285484        rs1121091       A       C       .       PASS    AA=A;DP=148     GT:GQ:DP        0|0:100:46      1|0:100:31      0|1:100:71
+8      118041278       .       T       C       .       PASS    AA=T;DP=135     GT:GQ:DP        0|0:100:46      1|0:100:32      0|1:100:56
+10     49718523        .       C       T       .       PASS    AA=C;DP=158     GT:GQ:DP        0|0:100:46      1|0:100:32      0|1:100:80
+22     36175784        .       G       A       .       PASS    AA=A;DP=151     GT:GQ:DP        0|0:100:46      1|0:68:20       0|1:100:42
+17     54027308        rs9303399       G       A       .       PASS    AA=G;DP=129     GT:GQ:DP        0|0:100:46      1|0:80:13       0|1:100:70
+3      42338373        rs17223780      C       T       .       PASS    AA=c;DP=167     GT:GQ:DP        0|0:100:46      1|0:97:30       0|1:100:92
+5      160511  rs9986162       C       T       .       PASS    AA=.;DP=132     GT:GQ:DP        0|0:100:46      1|1:31:14       0|1:100:69
+10     127300705       rs11817676      A       G       .       PASS    AA=A;DP=151     GT:GQ:DP        0|0:100:46      1|1:49:19       0|1:100:43
+10     11895605        rs11599763      T       C       .       PASS    AA=C;DP=166     GT:GQ:DP        0|0:100:46      1|1:53:25       0|1:100:95
+17     60688021        rs9889638       A       G       .       PASS    AA=G;DP=148     GT:GQ:DP        0|0:100:46      1|1:61:22       0|1:100:77
+2      48052126        .       A       G       .       PASS    AA=A;DP=140     GT:GQ:DP        0|0:100:46      1|1:70:27       0|1:100:66
+16     83596449        rs9921436       C       T       .       PASS    AA=T;DP=161     GT:GQ:DP        0|0:100:46      1|1:91:32       0|1:100:45
+3      139466946       .       A       G       .       PASS    AA=A;DP=144     GT:GQ:DP        0|0:100:47      0|1:100:18      0|0:100:80
+12     15437425        rs12320690      A       T       .       PASS    AA=A;DP=139     GT:GQ:DP        0|0:100:47      0|1:100:20      0|0:100:72
+4      9046266 .       T       C       .       PASS    AA=c;DP=142     GT:GQ:DP        0|0:100:47      0|1:100:21      0|0:100:75
+20     30888882        rs388492        G       A       .       PASS    AA=G;DP=140     GT:GQ:DP        0|0:100:47      0|1:100:22      0|0:100:70
+10     120562236       rs11596456      G       A       .       PASS    AA=g;DP=145     GT:GQ:DP        0|0:100:47      0|1:100:22      0|0:100:79
+5      135238456       rs6872151       C       T       .       PASS    AA=C;DP=162     GT:GQ:DP        0|0:100:47      0|1:100:24      0|0:100:48
+16     10038550        rs12447029      G       A       .       PASS    AA=.;DP=157     GT:GQ:DP        0|0:100:47      0|1:100:25      0|0:100:68
+4      136107453       .       G       A       .       PASS    AA=G;DP=166     GT:GQ:DP        0|0:100:47      0|1:100:31      0|0:100:90
+1      89932590        .       T       C       .       PASS    AA=T;DP=178     GT:GQ:DP        0|0:100:47      0|1:100:32      0|0:100:42
+9      123642188       rs7039955       C       T       .       PASS    AA=C;DP=185     GT:GQ:DP        0|0:100:47      0|1:100:32      0|0:100:42
+7      33742839        rs60650493      C       T       .       PASS    AA=C;DP=146     GT:GQ:DP        0|0:100:47      1|0:100:20      0|1:100:81
+10     31085335        rs11008226      A       T       .       PASS    AA=A;DP=105     GT:GQ:DP        0|0:100:47      1|0:100:21      0|1:86:26
+4      2144415 rs57556858      G       A       .       PASS    AA=G;DP=156     GT:GQ:DP        0|0:100:47      1|0:100:26      0|1:100:83
+16     26801587        rs11074806      G       A       .       PASS    AA=G;DP=135     GT:GQ:DP        0|0:100:47      1|0:100:27      0|1:100:64
+12     49837519        rs4768973       T       C       .       PASS    AA=T;DP=144     GT:GQ:DP        0|0:100:47      1|0:100:27      0|1:100:75
+2      137116052       .       G       A       .       PASS    AA=G;DP=179     GT:GQ:DP        0|0:100:47      1|0:100:28      0|1:100:60
+5      38013801        rs61360475      G       A       .       PASS    AA=A;DP=169     GT:GQ:DP        0|0:100:47      1|0:100:28      0|1:100:97
+11     118938104       rs57460811      C       T       .       PASS    AA=C;DP=141     GT:GQ:DP        0|0:100:47      1|0:100:29      0|1:100:68
+2      136721621       .       C       G       .       PASS    AA=C;DP=171     GT:GQ:DP        0|0:100:47      1|0:100:31      0|1:100:56
+13     26841083        .       T       G       .       PASS    AA=T;DP=148     GT:GQ:DP        0|0:100:47      1|0:100:32      0|1:100:71
+13     108672682       rs7999814       T       C       .       PASS    AA=T;DP=151     GT:GQ:DP        0|0:100:47      1|0:100:33      0|1:100:73
+16     24688677        rs2112785       C       T       .       PASS    AA=T;DP=161     GT:GQ:DP        0|0:100:47      1|0:100:35      0|1:100:79
+2      9107318 .       A       T       .       PASS    AA=A;DP=144     GT:GQ:DP        0|0:100:47      1|0:59:27       0|1:100:71
+20     17768309        rs6080860       T       C       .       PASS    AA=t;DP=127     GT:GQ:DP        0|0:100:47      1|0:68:20       0|1:100:59
+2      62359785        .       A       T       .       PASS    AA=A;DP=157     GT:GQ:DP        0|0:100:47      1|0:94:20       0|1:100:91
+16     904418  .       G       A       .       PASS    AA=G;DP=128     GT:GQ:DP        0|0:100:47      1|0:97:14       0|1:100:67
+17     29951979        rs11653925      G       C       .       PASS    AA=G;DP=143     GT:GQ:DP        0|0:100:47      1|1:22:9        0|1:100:89
+10     104229090       rs5870  T       C       .       PASS    AA=T;DP=138     GT:GQ:DP        0|0:100:47      1|1:49:18       0|1:100:58
+9      37619981        rs12002010      C       T       .       PASS    AA=C;DP=142     GT:GQ:DP        0|0:100:47      1|1:52:20       0|1:100:79
+11     15083368        rs4757283       T       G       .       PASS    AA=T;DP=137     GT:GQ:DP        0|0:100:47      1|1:58:21       0|1:100:68
+5      54753307        rs230756        G       A       .       PASS    AA=g;DP=158     GT:GQ:DP        0|0:100:47      1|1:64:24       0|1:100:87
+17     15752596        rs859248        C       G       .       PASS    AA=G;DP=144     GT:GQ:DP        0|0:100:48      0|1:100:17      0|0:100:79
+15     88967840        rs10048037      T       C       .       PASS    AA=N;DP=144     GT:GQ:DP        0|0:100:48      0|1:100:18      0|0:100:79
+11     95673561        rs4376867       G       A       .       PASS    AA=G;DP=144     GT:GQ:DP        0|0:100:48      0|1:100:19      0|0:100:75
+7      141915958       rs60405954      C       T       .       PASS    AA=C;DP=173     GT:GQ:DP        0|0:100:48      0|1:100:21      0|0:100:101
+18     13065998        .       G       C       .       PASS    AA=G;DP=169     GT:GQ:DP        0|0:100:48      0|1:100:23      0|0:100:50
+4      185898601       rs4862409       T       C       .       PASS    AA=T;DP=163     GT:GQ:DP        0|0:100:48      0|1:100:25      0|0:100:46
+1      178520592       rs2764458       C       G       .       PASS    AA=G;DP=131;HM2 GT:GQ:DP        0|0:100:48      0|1:100:27      0|0:100:56
+4      187073389       .       G       A       .       PASS    AA=G;DP=170     GT:GQ:DP        0|0:100:48      0|1:100:31      0|0:100:49
+7      128518929       rs4728149       A       G       .       PASS    AA=A;DP=140     GT:GQ:DP        0|0:100:48      1|0:100:22      0|1:100:71
+6      32287857        rs17201756      T       A       .       PASS    AA=T;DP=156     GT:GQ:DP        0|0:100:48      1|0:100:26      0|1:100:81
+14     61499658        rs2353244       G       A       .       PASS    AA=A;DP=159     GT:GQ:DP        0|0:100:48      1|0:100:29      0|1:100:81
+20     46407645        .       C       A       .       PASS    AA=C;DP=174     GT:GQ:DP        0|0:100:48      1|0:100:33      0|1:100:92
+16     586422  rs4984672       A       G       .       PASS    AA=A;DP=155     GT:GQ:DP        0|0:100:48      1|0:61:17       0|1:100:88
+11     58201137        rs573699        A       C       .       PASS    AA=C;DP=131     GT:GQ:DP        0|0:100:48      1|0:96:25       0|1:100:58
+1      59517429        rs333661        C       T       .       PASS    AA=T;DP=165;HM2 GT:GQ:DP        0|0:100:48      1|1:55:23       0|1:100:87
+16     181979  .       C       T       .       PASS    AA=C;DP=155     GT:GQ:DP        0|0:100:49      0|1:100:12      0|0:100:95
+5      96832344        rs1843338       T       C       .       PASS    AA=T;DP=153     GT:GQ:DP        0|0:100:49      0|1:100:18      0|0:100:86
+11     29899904        rs60447585      C       T       .       PASS    AA=C;DP=121     GT:GQ:DP        0|0:100:49      0|1:100:20      0|0:100:50
+4      24654177        rs6811097       G       A       .       PASS    AA=G;DP=146     GT:GQ:DP        0|0:100:49      0|1:100:22      0|0:100:76
+17     55506667        rs9895182       T       C       .       PASS    AA=C;DP=176     GT:GQ:DP        0|0:100:49      0|1:100:25      0|0:100:103
+10     128363697       rs10736877      G       A       .       PASS    AA=A;DP=151     GT:GQ:DP        0|0:100:49      0|1:100:31      0|0:100:71
+12     56653999        rs10877045      T       G       .       PASS    AA=T;DP=142     GT:GQ:DP        0|0:100:49      0|1:100:34      0|0:100:63
+2      217289360       rs16856545      G       A       .       PASS    AA=G;DP=134     GT:GQ:DP        0|0:100:49      1|0:100:19      0|1:100:65
+9      294945  .       G       C       .       PASS    AA=G;DP=118     GT:GQ:DP        0|0:100:49      1|0:100:22      0|1:100:39
+11     127683087       rs12285868      G       A       .       PASS    AA=g;DP=165     GT:GQ:DP        0|0:100:49      1|0:100:30      0|1:100:42
+2      37819617        .       T       C       .       PASS    AA=T;DP=174     GT:GQ:DP        0|0:100:49      1|0:100:32      0|1:85:95
+4      37733933        rs62299978      A       T       .       PASS    AA=A;DP=172     GT:GQ:DP        0|0:100:49      1|0:73:16       0|1:100:107
+3      190653042       rs9855126       T       C       .       PASS    AA=T;DP=153     GT:GQ:DP        0|0:100:49      1|1:64:23       0|1:100:83
+11     125744042       rs60843925      T       C       .       PASS    AA=T;DP=127     GT:GQ:DP        0|0:100:50      1|0:100:15      0|1:100:60
+21     33479900        .       G       T       .       PASS    AA=g;DP=134     GT:GQ:DP        0|0:100:50      1|0:100:23      0|1:100:64
+10     112437590       .       C       T       .       PASS    AA=c;DP=138     GT:GQ:DP        0|0:100:50      1|0:100:25      0|1:100:53
+8      40302630        .       C       T       .       PASS    AA=C;DP=143     GT:GQ:DP        0|0:100:50      1|0:100:25      0|1:100:67
+16     5219686 .       A       G       .       PASS    AA=A;DP=159     GT:GQ:DP        0|0:100:50      1|0:100:25      0|1:100:86
+14     76782014        rs59262654      A       G       .       PASS    AA=A;DP=166     GT:GQ:DP        0|0:100:50      1|0:100:27      0|1:100:90
+1      158219726       rs4656862       T       G       .       PASS    AA=G;DP=154;HM2;HM3     GT:GQ:DP        0|0:100:50      1|0:100:29      0|1:100:76
+19     16195939        rs17795903      G       A       .       PASS    AA=G;DP=163     GT:GQ:DP        0|0:100:50      1|0:71:23       0|1:100:51
+16     22796687        rs2519974       G       A       .       PASS    AA=G;DP=152     GT:GQ:DP        0|0:100:50      1|1:70:25       0|1:100:81
+11     22108676        .       C       T       .       PASS    AA=C;DP=176     GT:GQ:DP        0|0:100:51      0|1:100:22      0|0:100:93
+15     34651481        rs16963435      T       G       .       PASS    AA=G;DP=153     GT:GQ:DP        0|0:100:51      0|1:100:25      0|0:100:81
+10     63941057        rs10995184      C       T       .       PASS    AA=C;DP=180     GT:GQ:DP        0|0:100:51      0|1:100:27      0|0:100:59
+10     2752579 rs11251459      T       A       .       PASS    AA=t;DP=163     GT:GQ:DP        0|0:100:51      0|1:100:27      0|0:100:89
+11     119236523       rs9633949       T       G       .       PASS    AA=T;DP=168     GT:GQ:DP        0|0:100:51      1|0:100:29      0|1:100:43
+1      21407431        rs59950774      C       A       .       PASS    AA=c;DP=168     GT:GQ:DP        0|0:100:51      1|0:100:29      0|1:100:88
+6      15749868        rs6914558       G       A       .       PASS    AA=A;DP=172     GT:GQ:DP        0|0:100:52      0|1:100:27      0|0:100:93
+4      87973443        rs10050311      C       T       .       PASS    AA=C;DP=150     GT:GQ:DP        0|0:100:52      1|0:100:27      0|1:100:72
+11     113013635       rs1022084       A       G       .       PASS    AA=A;DP=113     GT:GQ:DP        0|0:100:52      1|1:31:12       0|1:100:34
+4      15932139        rs6826788       C       T       .       PASS    AA=C;DP=163     GT:GQ:DP        0|0:100:52      1|1:88:31       0|1:100:83
+4      16274774        rs12647570      A       T       .       PASS    AA=T;DP=145     GT:GQ:DP        0|0:100:53      1|0:100:19      0|1:100:71
+2      216857190       .       G       C       .       PASS    AA=G;DP=160     GT:GQ:DP        0|0:100:53      1|0:100:30      0|1:100:78
+2      61556917        .       C       T       .       PASS    AA=C;DP=143     GT:GQ:DP        0|0:100:54      0|1:100:12      0|0:100:36
+14     106253445       rs7149135       C       T       .       PASS    AA=.;DP=161     GT:GQ:DP        0|0:100:54      0|1:100:30      0|0:100:79
+12     93214952        .       A       C       .       PASS    AA=A;DP=170     GT:GQ:DP        0|0:100:54      0|1:100:36      0|0:100:78
+12     91386579        rs2251030       G       A       .       PASS    AA=G;DP=156     GT:GQ:DP        0|0:100:54      1|1:70:25       0|1:100:77
+11     44560616        rs744631        C       G       .       PASS    AA=C;DP=167     GT:GQ:DP        0|0:100:55      0|1:100:22      0|0:100:93
+3      142986034       .       G       A       .       PASS    AA=G;DP=137     GT:GQ:DP        0|0:100:55      0|1:100:25      0|0:100:59
+7      61527960        .       T       C       .       PASS    AA=.;DP=166     GT:GQ:DP        0|0:100:57      0|1:100:36      0|0:100:79
+7      137275099       rs273988        G       A       .       PASS    AA=G;DP=147     GT:GQ:DP        0|0:100:58      0|1:100:20      0|0:100:56
+16     19073027        rs59884461      T       C       .       PASS    AA=T;DP=166     GT:GQ:DP        0|0:100:58      1|0:100:27      0|1:100:44
+X      23778296        .       T       A       .       PASS    AA=T;DP=78      GT:GQ:DP        0|0:10:12       1|0:98:13       0|1:100:27
+18     24391983        .       C       A       .       PASS    AA=-;DP=97      GT:GQ:DP        0|0:10:16       0|1:100:21      0|0:100:59
+6      29894778        .       T       C       .       PASS    AA=.;DP=135     GT:GQ:DP        0|0:10:26       1|0:10:20       0|1:100:50
+X      122057226       rs1496795       T       G       .       PASS    AA=G;DP=113     GT:GQ:DP        0|0:11:13       1|0:100:21      0|1:100:38
+X      32268250        .       T       C       .       PASS    AA=T;DP=80      GT:GQ:DP        0|0:11:3        1|0:54:17       0|1:100:32
+18     75328273        rs2304741       T       C       .       PASS    AA=C;DP=64      GT:GQ:DP        0|0:12:20       1|1:6:3 0|1:100:37
+10     10711235        rs1327857       G       A       .       PASS    AA=G;DP=119     GT:GQ:DP        0|0:12:24       1|0:56:19       0|1:100:77
+X      88153123        rs6522178       T       C       .       PASS    AA=T;DP=103     GT:GQ:DP        0|0:12:8        1|1:79:28       0|1:100:34
+X      89862164        .       T       C       .       PASS    AA=.;DP=74      GT:GQ:DP        0|0:13:12       0|1:100:14      0|0:57:31
+X      24333406        rs5944703       C       T       .       PASS    AA=T;DP=98      GT:GQ:DP        0|0:13:12       0|1:100:25      0|0:66:22
+11     91551221        rs10830867      A       T       .       PASS    AA=A;DP=72      GT:GQ:DP        0|0:13:14       1|0:52:13       0|1:100:45
+4      1287897 .       G       C       .       PASS    AA=g;DP=85      GT:GQ:DP        0|0:13:14       1|0:59:12       0|1:100:61
+14     82133348        rs11845423      C       A       .       PASS    AA=c;DP=93      GT:GQ:DP        0|0:13:14       1|0:81:11       0|1:100:64
+1      150690464       rs6667236       C       T       .       PASS    AA=C;DP=77;HM2  GT:GQ:DP        0|0:14:12       1|0:42:17       0|1:100:43
+1      170238940       rs12406353      A       C       .       PASS    AA=A;DP=87;HM2;HM3      GT:GQ:DP        0|0:14:13       1|1:28:11       0|1:100:64
+6      168677585       rs9456168       T       C       .       PASS    AA=C;DP=65      GT:GQ:DP        0|0:14:14       1|0:14:14       0|1:100:40
+X      125978776       .       C       A       .       PASS    AA=C;DP=64      GT:GQ:DP        0|0:14:4        1|0:82:19       0|1:100:20
+X      93161220        rs12014035      C       A       .       PASS    AA=C;DP=61      GT:GQ:DP        0|0:14:4        1|0:92:18       0|1:87:20
+12     126945243       .       A       G       .       PASS    AA=A;DP=91      GT:GQ:DP        0|0:15:15       1|0:100:22      0|1:100:49
+2      129651181       rs55896200      T       C       .       PASS    AA=N;DP=76      GT:GQ:DP        0|0:15:21       1|1:12:10       0|1:100:47
+4      139347617       .       C       A       .       PASS    AA=a;DP=103     GT:GQ:DP        0|0:15:22       1|0:76:24       0|1:97:50
+X      19028289        rs5955692       G       T       .       PASS    AA=T;DP=139     GT:GQ:DP        0|0:16:13       1|0:100:40      0|1:100:40
+21     15451042        .       T       A       .       PASS    AA=T;DP=101     GT:GQ:DP        0|0:16:19       1|0:100:30      0|1:100:53
+4      178895490       rs1531013       A       G       .       PASS    AA=A;DP=102     GT:GQ:DP        0|0:17:14       1|0:87:21       0|1:100:49
+1      241118991       rs28661485      A       G       .       PASS    AA=.;DP=110     GT:GQ:DP        0|0:17:32       1|1:52:21       0|1:100:52
+X      115477369       .       C       A       .       PASS    AA=C;DP=94      GT:GQ:DP        0|0:17:5        1|0:100:24      0|1:100:30
+X      88774769        rs56129923      C       T       .       PASS    AA=.;DP=68      GT:GQ:DP        0|0:17:5        1|0:100:26      0|1:100:30
+X      105411237       .       C       T       .       PASS    AA=-;DP=100     GT:GQ:DP        0|0:17:5        1|0:100:31      0|1:100:27
+X      12969700        rs2016060       A       G       .       PASS    AA=G;DP=69      GT:GQ:DP        0|0:17:5        1|0:99:20       0|1:61:24
+X      139240055       rs5955447       A       T       .       PASS    AA=A;DP=88      GT:GQ:DP        0|0:17:6        1|0:100:21      0|1:100:33
+14     45460440        rs12588722      C       A       .       PASS    AA=A;DP=62      GT:GQ:DP        0|0:18:11       1|0:73:12       0|1:100:40
+4      124353848       rs304637        A       G       .       PASS    AA=a;DP=93      GT:GQ:DP        0|0:18:12       1|0:95:23       0|1:100:55
+X      146122519       .       C       A       .       PASS    AA=C;DP=73      GT:GQ:DP        0|0:18:14       1|0:68:14       0|1:100:18
+8      123204615       rs16896731      G       A       .       PASS    AA=G;DP=80      GT:GQ:DP        0|0:18:15       0|1:100:26      0|0:90:30
+2      239200482       .       C       A       .       PASS    AA=C;DP=143     GT:GQ:DP        0|0:18:16       1|0:100:32      0|1:100:45
+10     79136538        rs61430683      A       G       .       PASS    AA=A;DP=92      GT:GQ:DP        0|0:18:16       1|0:100:36      0|1:100:40
+6      31354429        .       T       C       .       PASS    AA=t;DP=87      GT:GQ:DP        0|0:18:23       1|0:18:14       0|1:100:51
+X      121318042       rs1842569       G       A       .       PASS    AA=G;DP=76      GT:GQ:DP        0|0:18:6        1|1:49:18       0|1:100:27
+X      99172457        rs1462571       C       T       .       PASS    AA=N;DP=69      GT:GQ:DP        0|0:18:7        1|1:52:19       0|1:100:15
+11     25910985        rs2165511       A       T       .       PASS    AA=T;DP=84      GT:GQ:DP        0|0:18:9        0|1:100:20      0|0:100:57
+13     104952873       .       A       T       .       PASS    AA=A;DP=77      GT:GQ:DP        0|0:19:11       1|0:100:27      0|1:100:38
+X      124425772       rs1458967       C       A       .       PASS    AA=A;DP=79      GT:GQ:DP        0|0:19:13       0|1:100:17      0|0:44:26
+4      91393509        .       A       C       .       PASS    AA=A;DP=91      GT:GQ:DP        0|0:19:14       1|0:100:15      0|1:100:61
+X      19285631        rs7059233       C       T       .       PASS    AA=T;DP=100     GT:GQ:DP        0|0:19:17       1|1:41:21       0|1:100:41
+11     123386803       rs7119447       A       G       .       PASS    AA=A;DP=109     GT:GQ:DP        0|0:20:14       0|1:100:17      0|0:100:63
+X      107320928       rs6622296       T       C       .       PASS    AA=T;DP=102     GT:GQ:DP        0|0:20:14       1|0:87:24       0|1:100:35
+1      169137688       .       A       C       .       PASS    AA=A;DP=81      GT:GQ:DP        0|0:20:16       1|0:53:16       0|1:100:49
+7      155578719       rs6459988       G       A       .       PASS    AA=A;DP=119     GT:GQ:DP        0|0:20:21       1|1:30:20       0|1:100:78
+20     32642504        rs6087603       A       T       .       PASS    AA=A;DP=58      GT:GQ:DP        0|0:20:5        0|1:100:18      0|0:90:30
+X      78950717        rs5959495       T       A       .       PASS    AA=T;DP=107     GT:GQ:DP        0|0:20:5        0|1:100:22      0|0:100:35
+X      89239703        rs12391755      C       T       .       PASS    AA=.;DP=76      GT:GQ:DP        0|0:20:5        0|1:98:26       0|0:44:26
+X      78832700        .       G       A       .       PASS    AA=G;DP=57      GT:GQ:DP        0|0:20:6        0|1:100:14      0|0:63:21
+X      37710137        rs5918437       T       C       .       PASS    AA=T;DP=79      GT:GQ:DP        0|0:20:6        1|0:100:24      0|1:100:18
+X      143474311       rs5987301       T       C       .       PASS    AA=T;DP=83      GT:GQ:DP        0|0:20:6        1|0:25:25       0|1:100:24
+2      175664299       rs59483244      C       T       .       PASS    AA=C;DP=67      GT:GQ:DP        0|0:20:6        1|0:48:10       0|1:100:53
+X      124374482       rs3126135       A       G       .       PASS    AA=A;DP=69      GT:GQ:DP        0|0:20:6        1|0:66:23       0|1:100:20
+X      87826173        rs7063653       A       G       .       PASS    AA=A;DP=91      GT:GQ:DP        0|0:20:6        1|0:72:26       0|1:94:21
+X      5441065 .       T       C       .       PASS    AA=.;DP=84      GT:GQ:DP        0|0:20:6        1|0:84:17       0|1:100:34
+X      148299132       .       C       T       .       PASS    AA=C;DP=65      GT:GQ:DP        0|0:20:7        1|0:100:14      0|1:100:24
+X      112704307       rs5973894       A       G       .       PASS    AA=A;DP=102     GT:GQ:DP        0|0:20:7        1|0:99:29       0|1:100:27
+X      149563124       rs5969965       A       T       .       PASS    AA=A;DP=65      GT:GQ:DP        0|0:21:12       1|1:28:11       0|1:100:22
+X      133520476       rs17000638      G       T       .       PASS    AA=G;DP=120     GT:GQ:DP        0|0:21:16       0|1:100:30      0|0:99:33
+4      7742955 rs61257216      C       G       .       PASS    AA=N;DP=62      GT:GQ:DP        0|0:21:16       1|0:24:9        0|1:100:39
+16     19433499        .       C       T       .       PASS    AA=C;DP=86      GT:GQ:DP        0|0:21:17       1|0:100:21      0|1:100:50
+X      63206141        rs7057445       C       A       .       PASS    AA=.;DP=89      GT:GQ:DP        0|0:21:17       1|0:62:17       0|1:100:39
+7      119047737       .       G       C       .       PASS    AA=C;DP=92      GT:GQ:DP        0|0:21:18       1|0:21:11       0|1:100:62
+4      168581789       .       G       C       .       PASS    AA=G;DP=144     GT:GQ:DP        0|0:21:32       1|0:21:25       0|1:100:82
+X      107864707       rs34287560      A       T       .       PASS    AA=A;DP=74      GT:GQ:DP        0|0:21:7        1|0:19:8        0|1:100:35
+X      30060867        rs6526953       T       C       .       PASS    AA=C;DP=76      GT:GQ:DP        0|0:21:7        1|1:26:16       0|1:100:33
+X      90590256        rs4598428       G       A       .       PASS    AA=A;DP=85      GT:GQ:DP        0|0:21:7        1|1:49:18       0|1:100:32
+X      125059628       .       C       T       .       PASS    AA=C;DP=108     GT:GQ:DP        0|0:21:7        1|1:62:33       0|1:100:30
+12     89015075        rs10777223      G       A       .       PASS    AA=G;DP=97      GT:GQ:DP        0|0:21:8        1|1:55:20       0|1:100:69
+17     76588751        .       C       T       .       PASS    AA=C;DP=67      GT:GQ:DP        0|0:23:12       1|0:62:9        0|1:100:40
+1      111205836       rs6696256       T       A       .       PASS    AA=A;DP=98;HM2  GT:GQ:DP        0|0:23:14       1|0:100:17      0|1:100:47
+19     22717257        rs12608521      C       T       .       PASS    AA=T;DP=93      GT:GQ:DP        0|0:23:14       1|0:23:19       0|1:100:59
+3      20812862        rs2221190       A       G       .       PASS    AA=A;DP=89      GT:GQ:DP        0|0:23:18       0|1:100:17      0|0:100:50
+8      131938268       .       C       T       .       PASS    AA=C;DP=76      GT:GQ:DP        0|0:23:18       1|1:49:19       0|1:100:26
+X      22203114        rs7062258       A       T       .       PASS    AA=A;DP=66      GT:GQ:DP        0|0:23:6        0|1:100:17      0|0:78:26
+X      95868131        rs7058735       C       A       .       PASS    AA=C;DP=107     GT:GQ:DP        0|0:23:6        0|1:100:32      0|0:58:31
+X      32969979        rs59988444      A       G       .       PASS    AA=a;DP=78      GT:GQ:DP        0|0:23:7        0|1:100:19      0|0:75:26
+X      144046296       rs516290        C       A       .       PASS    AA=-;DP=76      GT:GQ:DP        0|0:23:7        1|0:100:16      0|1:84:33
+X      33496361        .       C       T       .       PASS    AA=c;DP=63      GT:GQ:DP        0|0:23:7        1|0:100:18      0|1:100:16
+X      146602449       rs12116183      A       G       .       PASS    AA=A;DP=74      GT:GQ:DP        0|0:23:7        1|0:100:21      0|1:100:22
+X      115557178       rs4424390       C       T       .       PASS    AA=-;DP=87      GT:GQ:DP        0|0:23:7        1|0:100:21      0|1:100:43
+X      90376405        .       C       T       .       PASS    AA=.;DP=68      GT:GQ:DP        0|0:23:7        1|0:11:24       0|1:100:22
+X      127447439       rs59189005      A       G       .       PASS    AA=A;DP=113     GT:GQ:DP        0|0:23:7        1|0:45:10       0|1:100:39
+X      136699896       rs5931215       A       T       .       PASS    AA=a;DP=73      GT:GQ:DP        0|0:23:7        1|0:79:19       0|1:100:31
+X      144089356       rs5965827       G       A       .       PASS    AA=A;DP=76      GT:GQ:DP        0|0:23:8        1|0:100:25      0|1:100:29
+X      122871557       rs17330644      C       T       .       PASS    AA=C;DP=109     GT:GQ:DP        0|0:23:8        1|0:50:29       0|1:100:34
+X      34290196        rs6631913       C       G       .       PASS    AA=G;DP=76      GT:GQ:DP        0|0:23:8        1|0:56:15       0|1:100:33
+21     16711700        rs240453        C       T       .       PASS    AA=C;DP=75      GT:GQ:DP        0|0:23:8        1|0:71:18       0|1:100:49
+X      101073045       rs34507465      G       A       .       PASS    AA=G;DP=86      GT:GQ:DP        0|0:23:8        1|0:92:16       0|1:100:38
+5      148383251       .       A       C       .       PASS    AA=A;DP=95      GT:GQ:DP        0|0:24:15       0|1:100:14      0|0:100:68
+7      3388900 .       G       C       .       PASS    AA=G;DP=93      GT:GQ:DP        0|0:24:15       1|0:100:17      0|1:100:59
+11     48346355        .       G       T       .       PASS    AA=g;DP=79      GT:GQ:DP        0|0:24:17       0|1:100:18      0|0:100:43
+X      109072364       .       A       C       .       PASS    AA=A;DP=119     GT:GQ:DP        0|0:24:17       0|1:100:25      0|0:100:37
+X      45964947        .       T       C       .       PASS    AA=T;DP=123     GT:GQ:DP        0|0:24:17       0|1:100:25      0|0:100:44
+5      120722077       .       A       T       .       PASS    AA=A;DP=104     GT:GQ:DP        0|0:24:18       1|0:100:24      0|1:100:62
+13     103946814       .       G       T       .       PASS    AA=T;DP=99      GT:GQ:DP        0|0:24:18       1|0:57:18       0|1:100:66
+4      40039455        rs9995944       G       A       .       PASS    AA=A;DP=131     GT:GQ:DP        0|0:24:18       1|0:67:25       0|1:100:89
+9      23252125        rs58948689      A       C       .       PASS    AA=A;DP=81      GT:GQ:DP        0|0:24:18       1|0:72:18       0|1:100:46
+4      126962207       rs12505119      T       C       .       PASS    AA=T;DP=70      GT:GQ:DP        0|0:24:19       1|1:37:17       0|1:100:23
+6      47545278        rs4715017       G       T       .       PASS    AA=T;DP=95      GT:GQ:DP        0|0:24:19       1|1:37:25       0|1:100:48
+8      28192028        rs2614046       T       C       .       PASS    AA=T;DP=118     GT:GQ:DP        0|0:24:23       1|0:100:23      0|1:100:71
+X      75502855        rs1604731       A       C       .       PASS    AA=N;DP=84      GT:GQ:DP        0|0:24:8        1|1:17:18       0|1:100:29
+15     32540767        rs4644830       A       G       .       PASS    AA=N;DP=78      GT:GQ:DP        0|0:24:8        1|1:25:10       0|1:100:59
+X      91329616        rs2025088       C       T       .       PASS    AA=t;DP=98      GT:GQ:DP        0|0:24:8        1|1:31:23       0|1:100:30
+X      81711248        rs7885562       A       G       .       PASS    AA=G;DP=85      GT:GQ:DP        0|0:24:8        1|1:40:15       0|1:100:21
+X      44688873        rs28532381      G       A       .       PASS    AA=A;DP=64      GT:GQ:DP        0|0:24:8        1|1:40:16       0|1:69:24
+1      100192455       rs7521627       T       C       .       PASS    AA=C;DP=89;HM2;HM3      GT:GQ:DP        0|0:24:8        1|1:46:18       0|1:100:62
+X      120317028       rs7885182       G       A       .       PASS    AA=G;DP=77      GT:GQ:DP        0|0:24:8        1|1:49:18       0|1:100:22
+9      78926759        rs17063348      C       G       .       PASS    AA=C;DP=90      GT:GQ:DP        0|0:24:8        1|1:49:19       0|1:100:67
+X      151023847       rs10856228      A       G       .       PASS    AA=A;DP=72      GT:GQ:DP        0|0:24:8        1|1:52:19       0|1:100:21
+X      31787958        rs2952923       G       A       .       PASS    AA=G;DP=109     GT:GQ:DP        0|0:24:8        1|1:68:30       0|1:100:32
+X      82108633        rs1325849       T       C       .       PASS    AA=C;DP=102     GT:GQ:DP        0|0:24:8        1|1:73:26       0|1:100:35
+X      97178337        rs1670436       A       G       .       PASS    AA=a;DP=94      GT:GQ:DP        0|0:24:9        0|1:100:30      0|0:90:30
+8      26885869        .       T       C       .       PASS    AA=T;DP=87      GT:GQ:DP        0|0:25:13       1|0:87:19       0|1:100:56
+4      65125765        rs11934492      T       C       .       PASS    AA=A;DP=71      GT:GQ:DP        0|0:25:14       1|0:100:12      0|1:100:45
+X      113166881       .       T       A       .       PASS    AA=T;DP=113     GT:GQ:DP        0|0:25:15       0|1:100:29      0|0:90:33
+18     3103134 rs12957638      C       T       .       PASS    AA=C;DP=61      GT:GQ:DP        0|0:25:16       1|0:68:13       0|1:100:22
+6      127409821       rs2745360       C       A       .       PASS    AA=C;DP=113     GT:GQ:DP        0|0:25:17       0|1:100:27      0|0:100:70
+8      143265769       rs7815558       T       C       .       PASS    AA=C;DP=87      GT:GQ:DP        0|0:25:23       1|1:28:11       0|1:100:41
+5      17649998        .       A       C       .       PASS    AA=a;DP=160     GT:GQ:DP        0|0:25:43       1|0:26:36       0|1:100:82
+20     6885986 .       C       T       .       PASS    AA=C;DP=70      GT:GQ:DP        0|0:26:14       1|0:100:16      0|1:100:40
+1      66726179        rs61798663      G       A       .       PASS    AA=G;DP=96      GT:GQ:DP        0|0:26:14       1|0:84:23       0|1:100:57
+10     124432482       rs3013203       T       C       .       PASS    AA=C;DP=103     GT:GQ:DP        0|0:26:14       1|1:45:27       0|1:100:64
+12     57416038        rs10161122      G       A       .       PASS    AA=A;DP=74      GT:GQ:DP        0|0:26:17       1|0:100:17      0|1:100:27
+7      9900275 rs2915142       T       A       .       PASS    AA=t;DP=89      GT:GQ:DP        0|0:26:18       0|1:100:25      0|0:93:31
+9      12551835        rs16929162      T       A       .       PASS    AA=T;DP=81      GT:GQ:DP        0|0:26:19       1|0:100:13      0|1:100:49
+X      29512758        rs5927039       G       A       .       PASS    AA=N;DP=107     GT:GQ:DP        0|0:26:19       1|0:100:27      0|1:100:43
+5      159582446       .       T       G       .       PASS    AA=T;DP=108     GT:GQ:DP        0|0:26:19       1|0:100:27      0|1:100:62
+21     26536733        rs7281710       A       G       .       PASS    AA=G;DP=76      GT:GQ:DP        0|0:26:19       1|0:17:12       0|1:100:47
+14     34360659        rs7144793       G       T       .       PASS    AA=G;DP=103     GT:GQ:DP        0|0:26:19       1|0:67:21       0|1:100:60
+9      105199379       .       G       A       .       PASS    AA=G;DP=96      GT:GQ:DP        0|0:26:19       1|0:71:9        0|1:100:65
+1      167265732       .       A       G       .       PASS    AA=A;DP=106     GT:GQ:DP        0|0:26:19       1|0:72:27       0|1:100:62
+7      79023980        .       A       C       .       PASS    AA=G;DP=81      GT:GQ:DP        0|0:26:19       1|0:78:17       0|1:100:45
+7      128714256       rs2718088       C       A       .       PASS    AA=C;DP=88      GT:GQ:DP        0|0:26:20       1|1:43:16       0|1:100:50
+11     118719345       rs948412        A       G       .       PASS    AA=A;DP=93      GT:GQ:DP        0|0:26:23       1|1:27:14       0|1:100:57
+5      4097357 rs57367478      C       T       .       PASS    AA=C;DP=102     GT:GQ:DP        0|0:26:24       1|0:27:24       0|1:100:48
+X      140967224       rs6528946       T       C       .       PASS    AA=T;DP=83      GT:GQ:DP        0|0:26:7        0|1:100:20      0|0:66:22
+X      42681691        rs205860        G       A       .       PASS    AA=A;DP=82      GT:GQ:DP        0|0:26:7        0|1:100:23      0|0:51:17
+X      143989124       rs6627061       T       C       .       PASS    AA=T;DP=97      GT:GQ:DP        0|0:26:7        0|1:100:24      0|0:60:20
+X      15988867        rs5980222       A       G       .       PASS    AA=G;DP=128     GT:GQ:DP        0|0:26:7        0|1:100:36      0|0:100:35
+19     2220142 rs2854110       G       A       .       PASS    AA=G;DP=52      GT:GQ:DP        0|0:26:7        0|1:89:16       0|0:75:25
+X      77394245        rs6623224       A       G       .       PASS    AA=a;DP=68      GT:GQ:DP        0|0:26:8        0|1:100:20      0|0:81:27
+X      44275839        rs7063136       T       A       .       PASS    AA=A;DP=119     GT:GQ:DP        0|0:26:8        0|1:100:30      0|0:100:37
+X      15002258        rs16979735      C       T       .       PASS    AA=T;DP=76      GT:GQ:DP        0|0:26:8        0|1:97:14       0|0:78:27
+7      118903443       rs10249542      G       A       .       PASS    AA=G;DP=80      GT:GQ:DP        0|0:26:8        1|0:100:17      0|1:100:56
+X      85520594        rs6623664       A       T       .       PASS    AA=A;DP=72      GT:GQ:DP        0|0:26:8        1|0:100:20      0|1:100:20
+X      93522901        .       G       T       .       PASS    AA=.;DP=78      GT:GQ:DP        0|0:26:8        1|0:100:20      0|1:100:21
+7      64051472        rs58376065      G       C       .       PASS    AA=G;DP=86      GT:GQ:DP        0|0:26:8        1|0:100:20      0|1:100:60
+9      25652121        rs13302003      G       A       .       PASS    AA=G;DP=77      GT:GQ:DP        0|0:26:8        1|0:100:21      0|1:100:48
+X      120684365       rs6648659       A       G       .       PASS    AA=A;DP=90      GT:GQ:DP        0|0:26:8        1|0:100:23      0|1:100:24
+X      107456441       rs11092607      T       C       .       PASS    AA=T;DP=136     GT:GQ:DP        0|0:26:8        1|0:100:32      0|1:100:37
+1      17668475        rs7533356       G       A       .       PASS    AA=g;DP=81      GT:GQ:DP        0|0:26:8        1|0:34:8        0|1:100:68
+X      112632170       .       A       G       .       PASS    AA=A;DP=80      GT:GQ:DP        0|0:26:8        1|0:38:14       0|1:100:25
+X      87620085        rs6418056       G       C       .       PASS    AA=C;DP=80      GT:GQ:DP        0|0:26:8        1|0:47:17       0|1:100:23
+X      78124127        .       C       T       .       PASS    AA=t;DP=80      GT:GQ:DP        0|0:26:8        1|0:53:10       0|1:100:22
+X      55676125        .       A       T       .       PASS    AA=A;DP=59      GT:GQ:DP        0|0:26:8        1|0:70:11       0|1:100:27
+X      33327980        .       C       T       .       PASS    AA=C;DP=76      GT:GQ:DP        0|0:26:8        1|0:71:19       0|1:88:20
+X      26913415        rs57039664      G       A       .       PASS    AA=G;DP=85      GT:GQ:DP        0|0:26:8        1|0:77:26       0|1:100:30
+X      27069142        rs1375113       C       T       .       PASS    AA=T;DP=76      GT:GQ:DP        0|0:26:8        1|0:85:27       0|1:100:19
+7      11551198        .       T       C       .       PASS    AA=T;DP=76      GT:GQ:DP        0|0:26:8        1|0:90:15       0|1:100:54
+20     47256460        .       G       A       .       PASS    AA=G;DP=62      GT:GQ:DP        0|0:26:9        1|0:55:10       0|1:100:33
+8      3437085 .       T       C       .       PASS    AA=T;DP=78      GT:GQ:DP        0|0:27:10       1|1:40:15       0|1:100:54
+10     27484334        rs7919803       C       A       .       PASS    AA=C;DP=66      GT:GQ:DP        0|0:27:10       1|1:7:14        0|1:100:35
+7      119154232       rs884489        C       A       .       PASS    AA=C;DP=101     GT:GQ:DP        0|0:27:15       1|0:100:20      0|1:100:68
+X      125459771       rs6635429       G       A       .       PASS    AA=G;DP=102     GT:GQ:DP        0|0:27:15       1|0:100:27      0|1:100:32
+3      6662242 rs1973510       G       A       .       PASS    AA=g;DP=74      GT:GQ:DP        0|0:27:17       1|0:27:7        0|1:100:51
+4      189151012       rs62353867      G       A       .       PASS    AA=G;DP=91      GT:GQ:DP        0|0:27:17       1|0:44:15       0|1:100:59
+13     113996575       rs12583598      T       A       .       PASS    AA=t;DP=96      GT:GQ:DP        0|0:27:18       0|1:100:16      0|0:100:60
+7      20846040        rs10280286      G       C       .       PASS    AA=G;DP=96      GT:GQ:DP        0|0:27:18       0|1:100:17      0|0:100:65
+3      41245574        .       C       T       .       PASS    AA=c;DP=101     GT:GQ:DP        0|0:27:18       0|1:100:21      0|0:100:64
+14     51473890        .       G       A       .       PASS    AA=G;DP=95      GT:GQ:DP        0|0:27:18       0|1:100:22      0|0:100:57
+10     107672764       .       C       T       .       PASS    AA=C;DP=133     GT:GQ:DP        0|0:27:18       0|1:100:29      0|0:100:45
+3      24774217        rs9882189       C       A       .       PASS    AA=C;DP=85      GT:GQ:DP        0|0:27:18       0|1:100:8       0|0:100:61
+1      54224151        rs12022177      T       A       .       PASS    AA=T;DP=102     GT:GQ:DP        0|0:27:20       1|1:43:16       0|1:100:69
+6      165558183       rs1744501       A       T       .       PASS    AA=T;DP=104     GT:GQ:DP        0|0:27:20       1|1:49:18       0|1:100:69
+X      19406339        .       T       G       .       PASS    AA=T;DP=75      GT:GQ:DP        0|0:27:9        1|1:12:15       0|1:100:19
+X      81653224        rs5967990       G       A       .       PASS    AA=A;DP=69      GT:GQ:DP        0|0:27:9        1|1:22:9        0|1:100:29
+X      55101911        rs7052895       A       G       .       PASS    AA=G;DP=100     GT:GQ:DP        0|0:27:9        1|1:31:16       0|1:100:31
+X      42760829        rs5991527       A       G       .       PASS    AA=G;DP=79      GT:GQ:DP        0|0:27:9        1|1:40:15       0|1:100:32
+X      75436555        rs5981441       A       G       .       PASS    AA=N;DP=102     GT:GQ:DP        0|0:27:9        1|1:40:15       0|1:100:47
+1      195567119       rs1764786       A       G       .       PASS    AA=G;DP=84;HM2  GT:GQ:DP        0|0:27:9        1|1:40:17       0|1:100:57
+X      44928622        rs5952707       A       G       .       PASS    AA=A;DP=87      GT:GQ:DP        0|0:27:9        1|1:61:24       0|1:100:30
+X      120342384       rs5956323       A       G       .       PASS    AA=a;DP=84      GT:GQ:DP        0|0:28:12       0|1:100:20      0|0:81:27
+15     35656668        .       G       A       .       PASS    AA=G;DP=84      GT:GQ:DP        0|0:28:14       1|0:100:20      0|1:100:50
+11     4758599 .       T       C       .       PASS    AA=C;DP=91      GT:GQ:DP        0|0:28:14       1|0:100:24      0|1:100:49
+5      18214760        rs2938433       C       G       .       PASS    AA=C;DP=89      GT:GQ:DP        0|0:28:14       1|0:75:20       0|1:100:51
+8      67479332        rs56256543      T       C       .       PASS    AA=T;DP=105     GT:GQ:DP        0|0:28:21       0|1:95:20       0|0:100:64
+15     29706415        .       C       T       .       PASS    AA=t;DP=87      GT:GQ:DP        0|0:28:21       1|0:80:19       0|1:48:46
+2      109783217       .       T       C       .       PASS    AA=C;DP=96      GT:GQ:DP        0|0:28:21       1|1:6:10        0|1:47:65
+14     95018668        .       C       A       .       PASS    AA=C;DP=119     GT:GQ:DP        0|0:28:22       1|0:76:17       0|1:100:74
+4      176437516       .       A       C       .       PASS    AA=A;DP=85      GT:GQ:DP        0|0:28:23       1|0:31:14       0|1:100:40
+X      105552568       .       G       A       .       PASS    AA=G;DP=126     GT:GQ:DP        0|0:29:10       1|0:100:31      0|1:100:40
+6      4065057 .       T       G       .       PASS    AA=T;DP=73      GT:GQ:DP        0|0:29:10       1|0:62:14       0|1:100:37
+X      62392014        rs58724210      C       T       .       PASS    AA=C;DP=95      GT:GQ:DP        0|0:29:10       1|0:96:27       0|1:100:37
+2      11804144        .       C       T       .       PASS    AA=C;DP=48      GT:GQ:DP        0|0:29:11       1|0:31:17       0|1:97:18
+X      126860819       rs12556145      T       C       .       PASS    AA=T;DP=75      GT:GQ:DP        0|0:29:11       1|0:31:18       0|1:100:26
+6      162202621       rs6919453       T       A       .       PASS    AA=T;DP=67      GT:GQ:DP        0|0:29:13       0|1:100:22      0|0:72:24
+X      32537970        rs5928047       G       C       .       PASS    AA=C;DP=116     GT:GQ:DP        0|0:29:14       0|1:100:28      0|0:99:34
+18     67548797        rs8090024       A       C       .       PASS    AA=A;DP=95      GT:GQ:DP        0|0:29:15       1|0:100:27      0|1:100:51
+7      120561019       rs34385410      T       A       .       PASS    AA=T;DP=83      GT:GQ:DP        0|0:29:15       1|1:34:13       0|1:100:56
+19     5659473 .       G       A       .       PASS    AA=G;DP=76      GT:GQ:DP        0|0:29:16       1|0:29:10       0|1:100:47
+X      14679126        rs16996977      G       A       .       PASS    AA=G;DP=109     GT:GQ:DP        0|0:29:17       0|1:100:28      0|0:58:31
+11     42071362        .       T       A       .       PASS    AA=A;DP=69      GT:GQ:DP        0|0:29:18       1|0:40:14       0|1:100:28
+1      177929198       rs9661439       G       A       .       PASS    AA=G;DP=107;HM2 GT:GQ:DP        0|0:29:19       0|1:100:18      0|0:100:72
+1      85799270        rs10158734      C       T       .       PASS    AA=C;DP=89;HM2  GT:GQ:DP        0|0:29:19       0|1:100:22      0|0:100:43
+14     20794440        .       C       T       .       PASS    AA=C;DP=112     GT:GQ:DP        0|0:29:19       0|1:100:32      0|0:100:62
+6      151369038       rs530971        G       A       .       PASS    AA=G;DP=97      GT:GQ:DP        0|0:29:19       0|1:100:9       0|0:100:53
+5      30199994        .       T       A       .       PASS    AA=T;DP=90      GT:GQ:DP        0|0:29:20       1|0:100:19      0|1:100:38
+8      14233031        .       T       C       .       PASS    AA=T;DP=73      GT:GQ:DP        0|0:29:20       1|0:51:15       0|1:100:38
+18     58401975        rs61533860      T       C       .       PASS    AA=T;DP=106     GT:GQ:DP        0|0:29:23       0|1:100:21      0|0:100:61
+2      226815681       .       A       G       .       PASS    AA=A;DP=87      GT:GQ:DP        0|0:29:8        0|1:100:14      0|0:100:64
+X      102292259       rs5945763       T       C       .       PASS    AA=T;DP=86      GT:GQ:DP        0|0:29:8        0|1:100:16      0|0:100:43
+X      121734450       rs6648851       A       G       .       PASS    AA=A;DP=67      GT:GQ:DP        0|0:29:8        0|1:100:17      0|0:57:19
+X      103882124       .       G       A       .       PASS    AA=G;DP=104     GT:GQ:DP        0|0:29:8        0|1:100:18      0|0:78:27
+4      99031381        .       A       C       .       PASS    AA=A;DP=77      GT:GQ:DP        0|0:29:8        0|1:100:20      0|0:100:46
+X      97032517        rs1576935       C       T       .       PASS    AA=C;DP=93      GT:GQ:DP        0|0:29:8        0|1:100:21      0|0:78:26
+X      73844456        rs5937293       G       A       .       PASS    AA=A;DP=90      GT:GQ:DP        0|0:29:8        0|1:100:22      0|0:87:29
+X      144166768       .       C       G       .       PASS    AA=c;DP=108     GT:GQ:DP        0|0:29:8        0|1:100:24      0|0:93:31
+X      87131744        rs7876587       T       A       .       PASS    AA=.;DP=86      GT:GQ:DP        0|0:29:8        0|1:100:24      0|0:93:32
+X      123991830       .       C       T       .       PASS    AA=T;DP=94      GT:GQ:DP        0|0:29:8        0|1:100:26      0|0:58:31
+X      34119690        rs5928447       C       T       .       PASS    AA=T;DP=100     GT:GQ:DP        0|0:29:8        0|1:100:27      0|0:72:24
+X      139430154       .       G       A       .       PASS    AA=g;DP=78      GT:GQ:DP        0|0:29:8        0|1:86:21       0|0:60:20
+X      147591663       rs16994694      T       G       .       PASS    AA=T;DP=79      GT:GQ:DP        0|0:29:9        1|0:100:17      0|1:100:26
+6      49029554        rs10456614      A       T       .       PASS    AA=T;DP=86      GT:GQ:DP        0|0:29:9        1|0:100:17      0|1:100:61
+X      22568714        .       G       A       .       PASS    AA=G;DP=88      GT:GQ:DP        0|0:29:9        1|0:100:22      0|1:100:28
+X      63372891        .       T       C       .       PASS    AA=T;DP=92      GT:GQ:DP        0|0:29:9        1|0:100:24      0|1:100:27
+X      96903565        rs2448815       G       A       .       PASS    AA=A;DP=121     GT:GQ:DP        0|0:29:9        1|0:100:27      0|1:100:52
+X      56171600        rs12009592      G       A       .       PASS    AA=G;DP=68      GT:GQ:DP        0|0:29:9        1|0:13:12       0|1:100:20
+X      13667353        .       A       C       .       PASS    AA=A;DP=56      GT:GQ:DP        0|0:29:9        1|0:49:18       0|1:64:20
+X      35818997        rs5972000       C       T       .       PASS    AA=C;DP=80      GT:GQ:DP        0|0:29:9        1|0:57:10       0|1:100:32
+X      51100909        rs1144830       C       G       .       PASS    AA=C;DP=110     GT:GQ:DP        0|0:29:9        1|0:80:20       0|1:100:42
+X      143288352       rs6637221       T       C       .       PASS    AA=T;DP=106     GT:GQ:DP        0|0:29:9        1|0:98:24       0|1:100:37
+22     48627903        rs6009905       T       C       .       PASS    AA=T;DP=67      GT:GQ:DP        0|0:30:10       1|1:16:7        0|1:100:50
+X      97255485        rs5966795       T       C       .       PASS    AA=C;DP=78      GT:GQ:DP        0|0:30:10       1|1:26:14       0|1:100:21
+X      7942606 rs5934332       C       T       .       PASS    AA=c;DP=85      GT:GQ:DP        0|0:30:10       1|1:34:13       0|1:100:40
+3      89261774        rs12714732      G       A       .       PASS    AA=G;DP=81      GT:GQ:DP        0|0:30:10       1|1:34:13       0|1:100:55
+X      84833488        rs5968597       A       G       .       PASS    AA=G;DP=103     GT:GQ:DP        0|0:30:10       1|1:55:20       0|1:100:32
+X      136858088       rs2366502       T       C       .       PASS    AA=C;DP=94      GT:GQ:DP        0|0:30:10       1|1:64:24       0|1:100:37
+3      2698530 rs60468166      C       T       .       PASS    AA=T;DP=80      GT:GQ:DP        0|0:30:11       1|1:37:14       0|1:100:50
+X      116861623       rs1578012       C       T       .       PASS    AA=N;DP=80      GT:GQ:DP        0|0:30:11       1|1:7:14        0|1:81:25
+X      11121902        rs6640718       A       T       .       PASS    AA=A;DP=125     GT:GQ:DP        0|0:30:11       1|1:91:32       0|1:100:43
+2      184110109       rs34694260      C       G       .       PASS    AA=C;DP=80      GT:GQ:DP        0|0:30:15       1|0:78:19       0|1:100:46
+18     43657845        .       T       G       .       PASS    AA=T;DP=84      GT:GQ:DP        0|0:30:16       0|1:100:21      0|0:100:45
+9      8132694 rs11787770      A       G       .       PASS    AA=G;DP=102     GT:GQ:DP        0|0:30:16       1|0:52:15       0|1:100:73
+1      7435324 rs1725252       A       G       .       PASS    AA=a;DP=120     GT:GQ:DP        0|0:30:21       1|1:43:22       0|1:100:78
+3      73386624        rs12639374      C       A       .       PASS    AA=C;DP=104     GT:GQ:DP        0|0:30:23       0|1:100:18      0|0:100:62
+9      90070674        .       T       A       .       PASS    AA=T;DP=134     GT:GQ:DP        0|0:30:24       1|0:90:23       0|1:100:84
+1      95070552        rs4000647       T       A       .       PASS    AA=T;DP=79;HM2;HM3      GT:GQ:DP        0|0:31:14       0|1:100:20      0|0:100:46
+4      173738460       rs12648442      T       C       .       PASS    AA=T;DP=80      GT:GQ:DP        0|0:31:17       0|1:100:15      0|0:100:49
+X      116064440       rs4397593       G       C       .       PASS    AA=C;DP=119     GT:GQ:DP        0|0:31:17       1|0:100:26      0|1:100:47
+5      40053600        .       G       T       .       PASS    AA=G;DP=111     GT:GQ:DP        0|0:31:20       1|0:100:32      0|1:100:58
+X      94138314        rs2789451       A       G       .       PASS    AA=.;DP=67      GT:GQ:DP        0|0:32:10       0|1:95:17       0|0:36:12
+X      133424688       rs17882059      G       A       .       PASS    AA=G;DP=103     GT:GQ:DP        0|0:32:10       1|0:100:18      0|1:100:29
+X      99328471        rs5920805       C       T       .       PASS    AA=C;DP=97      GT:GQ:DP        0|0:32:10       1|0:100:18      0|1:100:37
+14     36410758        rs4906468       T       A       .       PASS    AA=T;DP=77      GT:GQ:DP        0|0:32:10       1|0:100:18      0|1:100:49
+X      104093675       rs5916843       T       C       .       PASS    AA=T;DP=118     GT:GQ:DP        0|0:32:10       1|0:100:21      0|1:100:43
+8      16415720        rs7821984       A       G       .       PASS    AA=A;DP=83      GT:GQ:DP        0|0:32:10       1|0:100:21      0|1:100:53
+16     67460378        rs13332761      G       C       .       PASS    AA=G;DP=80      GT:GQ:DP        0|0:32:10       1|0:100:22      0|1:100:47
+X      116288482       .       G       C       .       PASS    AA=N;DP=94      GT:GQ:DP        0|0:32:10       1|0:100:22      0|1:99:31
+X      28013370        .       C       A       .       PASS    AA=C;DP=91      GT:GQ:DP        0|0:32:10       1|0:100:24      0|1:100:28
+X      8208379 rs62582697      A       G       .       PASS    AA=A;DP=91      GT:GQ:DP        0|0:32:10       1|0:100:26      0|1:100:36
+X      117006872       .       C       A       .       PASS    AA=C;DP=91      GT:GQ:DP        0|0:32:10       1|0:100:27      0|1:100:32
+X      700240  rs28678116      T       C       .       PASS    AA=.;DP=44      GT:GQ:DP        0|0:32:10       1|0:41:10       0|1:87:22
+9      80031921        rs10123755      T       G       .       PASS    AA=t;DP=78      GT:GQ:DP        0|0:32:10       1|0:49:12       0|1:100:57
+18     42582195        .       A       T       .       PASS    AA=A;DP=81      GT:GQ:DP        0|0:32:10       1|0:59:20       0|1:100:50
+1      72279929        .       T       C       .       PASS    AA=T;DP=74      GT:GQ:DP        0|0:32:10       1|0:61:20       0|1:100:44
+20     61449317        rs45623331      C       T       .       PASS    AA=C;DP=68      GT:GQ:DP        0|0:32:10       1|0:71:11       0|1:100:40
+2      192975695       .       C       T       .       PASS    AA=C;DP=77      GT:GQ:DP        0|0:32:10       1|0:84:17       0|1:100:48
+5      25869905        rs444346        A       G       .       PASS    AA=a;DP=77      GT:GQ:DP        0|0:32:10       1|0:84:21       0|1:100:45
+X      101290160       rs5945037       T       C       .       PASS    AA=N;DP=70      GT:GQ:DP        0|0:32:10       1|0:94:19       0|1:87:14
+21     16614956        .       G       A       .       PASS    AA=G;DP=83      GT:GQ:DP        0|0:32:10       1|0:95:21       0|1:100:51
+X      127535669       .       T       C       .       PASS    AA=T;DP=80      GT:GQ:DP        0|0:32:10       1|0:98:20       0|1:98:29
+5      84503488        rs58147205      C       G       .       PASS    AA=C;DP=75      GT:GQ:DP        0|0:32:11       1|0:100:19      0|1:100:42
+X      25632038        .       C       A       .       PASS    AA=C;DP=122     GT:GQ:DP        0|0:32:11       1|0:100:23      0|1:100:42
+X      101214143       rs6523610       T       C       .       PASS    AA=.;DP=133     GT:GQ:DP        0|0:32:11       1|0:100:24      0|1:100:57
+6      24971980        rs34489598      C       T       .       PASS    AA=C;DP=94      GT:GQ:DP        0|0:32:11       1|0:100:30      0|1:100:53
+12     69137604        rs11178244      C       A       .       PASS    AA=C;DP=91      GT:GQ:DP        0|0:32:11       1|0:15:14       0|1:100:66
+X      3547843 rs12390258      C       T       .       PASS    AA=c;DP=109     GT:GQ:DP        0|0:32:11       1|0:62:15       0|1:100:47
+17     48258005        .       C       A       .       PASS    AA=C;DP=74      GT:GQ:DP        0|0:32:11       1|0:67:12       0|1:100:54
+X      89564604        rs2557810       T       A       .       PASS    AA=A;DP=86      GT:GQ:DP        0|0:32:11       1|0:76:19       0|1:93:40
+3      82628448        rs7635445       A       G       .       PASS    AA=G;DP=88      GT:GQ:DP        0|0:32:11       1|0:93:19       0|1:100:59
+X      147914854       rs6641489       C       G       .       PASS    AA=G;DP=101     GT:GQ:DP        0|0:32:13       1|0:100:23      0|1:100:43
+X      94669868        .       A       G       .       PASS    AA=A;DP=101     GT:GQ:DP        0|0:32:13       1|0:33:29       0|1:100:25
+10     135105594       rs2249284       G       A       .       PASS    AA=N;DP=74      GT:GQ:DP        0|0:32:13       1|0:43:6        0|1:100:53
+X      44833082        rs7891646       C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        0|0:32:16       0|1:100:23      0|0:100:39
+16     17807676        rs62034792      A       G       .       PASS    AA=A;DP=100     GT:GQ:DP        0|0:32:16       0|1:100:26      0|0:100:58
+6      95040146        rs9445224       G       T       .       PASS    AA=g;DP=97      GT:GQ:DP        0|0:32:19       1|0:11:11       0|1:100:71
+11     23698982        .       T       C       .       PASS    AA=.;DP=100     GT:GQ:DP        0|0:32:20       0|1:100:16      0|0:100:60
+6      56611879        .       T       C       .       PASS    AA=T;DP=99      GT:GQ:DP        0|0:32:20       0|1:100:17      0|0:100:62
+16     84654910        rs62050066      A       G       .       PASS    AA=a;DP=67      GT:GQ:DP        0|0:32:20       0|1:100:17      0|0:66:22
+11     23808661        rs2896674       T       G       .       PASS    AA=.;DP=81      GT:GQ:DP        0|0:32:20       0|1:100:19      0|0:100:39
+4      135323349       .       T       C       .       PASS    AA=T;DP=80      GT:GQ:DP        0|0:32:20       0|1:100:21      0|0:99:39
+21     24787213        rs2829133       G       A       .       PASS    AA=G;DP=118     GT:GQ:DP        0|0:32:20       0|1:100:25      0|0:100:74
+16     11977987        rs446289        T       G       .       PASS    AA=t;DP=63      GT:GQ:DP        0|0:32:20       0|1:100:6       0|0:75:26
+12     74572373        rs58765466      A       G       .       PASS    AA=A;DP=128     GT:GQ:DP        0|0:32:20       0|1:97:26       0|0:100:83
+5      20679721        .       C       T       .       PASS    AA=T;DP=94      GT:GQ:DP        0|0:32:20       1|0:100:23      0|1:100:49
+4      79566886        rs986925        G       T       .       PASS    AA=G;DP=104     GT:GQ:DP        0|0:32:20       1|0:99:20       0|1:100:65
+4      84934322        rs7679837       C       T       .       PASS    AA=T;DP=97      GT:GQ:DP        0|0:32:21       1|0:100:18      0|1:100:58
+8      80089274        .       G       C       .       PASS    AA=G;DP=96      GT:GQ:DP        0|0:32:21       1|0:100:20      0|1:100:50
+8      13760282        rs1600646       T       G       .       PASS    AA=T;DP=127     GT:GQ:DP        0|0:32:21       1|0:100:20      0|1:100:81
+2      125397328       rs58306548      C       T       .       PASS    AA=T;DP=85      GT:GQ:DP        0|0:32:21       1|0:100:21      0|1:100:30
+7      6185731 .       A       T       .       PASS    AA=A;DP=72      GT:GQ:DP        0|0:32:21       1|0:75:11       0|1:100:41
+1      2983667 rs2981888       C       G       .       PASS    AA=G;DP=77      GT:GQ:DP        0|0:32:21       1|0:82:12       0|1:100:34
+7      144441800       rs28647738      C       T       .       PASS    AA=T;DP=120     GT:GQ:DP        0|0:32:21       1|0:98:21       0|1:100:66
+1      190868735       rs12024365      C       A       .       PASS    AA=A;DP=89      GT:GQ:DP        0|0:32:23       0|1:100:25      0|0:44:35
+1      198709382       .       T       G       .       PASS    AA=T;DP=114     GT:GQ:DP        0|0:32:25       1|0:65:17       0|1:100:76
+X      8346081 rs6638802       G       A       .       PASS    AA=g;DP=66      GT:GQ:DP        0|0:32:9        0|1:100:12      0|0:72:24
+2      130423721       .       C       T       .       PASS    AA=c;DP=85      GT:GQ:DP        0|0:32:9        0|1:100:14      0|0:100:62
+9      97853514        .       C       T       .       PASS    AA=C;DP=69      GT:GQ:DP        0|0:32:9        0|1:100:15      0|0:100:46
+2      77098655        .       G       A       .       PASS    AA=G;DP=81      GT:GQ:DP        0|0:32:9        0|1:100:15      0|0:100:52
+X      78745809        .       C       A       .       PASS    AA=C;DP=80      GT:GQ:DP        0|0:32:9        0|1:100:16      0|0:81:27
+X      141513262       .       G       A       .       PASS    AA=G;DP=91      GT:GQ:DP        0|0:32:9        0|1:100:18      0|0:22:18
+X      139343452       .       C       A       .       PASS    AA=C;DP=112     GT:GQ:DP        0|0:32:9        0|1:100:19      0|0:100:40
+4      93734387        rs12500850      T       A       .       PASS    AA=T;DP=88      GT:GQ:DP        0|0:32:9        0|1:100:21      0|0:100:61
+X      22525270        rs5970801       T       A       .       PASS    AA=t;DP=110     GT:GQ:DP        0|0:32:9        0|1:100:21      0|0:87:29
+X      25773309        .       T       G       .       PASS    AA=G;DP=103     GT:GQ:DP        0|0:32:9        0|1:100:22      0|0:100:36
+X      67176375        rs12008174      A       T       .       PASS    AA=A;DP=129     GT:GQ:DP        0|0:32:9        0|1:100:22      0|0:100:45
+X      82324665        .       G       A       .       PASS    AA=G;DP=100     GT:GQ:DP        0|0:32:9        0|1:100:23      0|0:100:44
+X      113661001       .       A       G       .       PASS    AA=A;DP=84      GT:GQ:DP        0|0:32:9        0|1:100:23      0|0:43:20
+6      95962022        rs9489933       T       C       .       PASS    AA=t;DP=104     GT:GQ:DP        0|0:32:9        0|1:96:19       0|0:100:76
+X      84662926        .       T       G       .       PASS    AA=T;DP=87      GT:GQ:DP        0|0:33:11       1|1:14:17       0|1:100:19
+X      24770251        rs5944689       C       A       .       PASS    AA=A;DP=91      GT:GQ:DP        0|0:33:11       1|1:16:12       0|1:100:28
+X      102976702       rs572374        T       C       .       PASS    AA=C;DP=67      GT:GQ:DP        0|0:33:11       1|1:28:13       0|1:100:24
+X      28682029        rs2188391       A       C       .       PASS    AA=A;DP=81      GT:GQ:DP        0|0:33:11       1|1:31:12       0|1:100:23
+X      87444404        rs60080843      T       A       .       PASS    AA=.;DP=82      GT:GQ:DP        0|0:33:11       1|1:43:18       0|1:100:28
+X      93369845        .       T       A       .       PASS    AA=T;DP=107     GT:GQ:DP        0|0:33:11       1|1:45:27       0|1:100:24
+18     61252031        rs12456445      G       A       .       PASS    AA=G;DP=79      GT:GQ:DP        0|0:33:11       1|1:46:17       0|1:100:51
+3      96515672        rs13064840      A       T       .       PASS    AA=A;DP=80      GT:GQ:DP        0|0:33:11       1|1:52:19       0|1:100:50
+X      86144447        rs4828408       T       C       .       PASS    AA=T;DP=113     GT:GQ:DP        0|0:33:11       1|1:58:22       0|1:100:27
+12     119387562       rs12307148      T       C       .       PASS    AA=T;DP=123     GT:GQ:DP        0|0:33:11       1|1:67:24       0|1:100:72
+X      100125488       rs6523437       C       T       .       PASS    AA=T;DP=86      GT:GQ:DP        0|0:33:11       1|1:70:25       0|1:100:26
+X      133053435       rs6638172       A       G       .       PASS    AA=G;DP=118     GT:GQ:DP        0|0:33:11       1|1:70:25       0|1:100:43
+X      82690937        rs2093137       C       A       .       PASS    AA=A;DP=108     GT:GQ:DP        0|0:33:11       1|1:73:26       0|1:100:29
+X      39130066        rs5963649       G       A       .       PASS    AA=g;DP=108     GT:GQ:DP        0|0:33:11       1|1:76:27       0|1:100:43
+3      183779296       rs1993506       G       C       .       PASS    AA=C;DP=81      GT:GQ:DP        0|0:33:11       1|1:9:12        0|1:100:58
+2      81870811        rs1432154       T       A       .       PASS    AA=T;DP=64      GT:GQ:DP        0|0:33:12       1|1:28:11       0|1:100:42
+6      142611712       rs56880364      C       T       .       PASS    AA=C;DP=67      GT:GQ:DP        0|0:33:17       1|0:99:19       0|1:100:19
+16     25346572        rs6497852       G       A       .       PASS    AA=G;DP=99      GT:GQ:DP        0|0:33:19       0|1:100:21      0|0:100:61
+5      162560712       .       T       G       .       PASS    AA=T;DP=80      GT:GQ:DP        0|0:33:19       1|0:53:13       0|1:100:50
+5      20359983        .       G       A       .       PASS    AA=g;DP=73      GT:GQ:DP        0|0:33:22       1|1:16:8        0|1:100:42
+8      50446278        rs28706002      C       T       .       PASS    AA=.;DP=89      GT:GQ:DP        0|0:33:25       1|0:100:22      0|1:100:42
+11     70542083        rs11232305      C       T       .       PASS    AA=T;DP=96      GT:GQ:DP        0|0:34:15       0|1:100:24      0|0:100:56
+3      185965077       .       G       A       .       PASS    AA=G;DP=92      GT:GQ:DP        0|0:34:16       0|1:100:13      0|0:100:64
+X      106580910       .       G       C       .       PASS    AA=C;DP=110     GT:GQ:DP        0|0:34:17       0|1:100:14      0|0:90:42
+11     54869807        .       T       A       .       PASS    AA=.;DP=80      GT:GQ:DP        0|0:34:17       0|1:100:24      0|0:84:28
+18     53033502        .       G       A       .       PASS    AA=G;DP=131     GT:GQ:DP        0|0:34:19       0|1:100:28      0|0:100:81
+15     40628161        rs16973349      G       A       .       PASS    AA=G;DP=84      GT:GQ:DP        0|0:34:19       1|1:31:12       0|1:100:46
+11     109287163       rs10891029      T       G       .       PASS    AA=T;DP=116     GT:GQ:DP        0|0:34:21       1|0:100:29      0|1:100:26
+4      176212407       rs13120816      A       T       .       PASS    AA=A;DP=92      GT:GQ:DP        0|0:34:21       1|0:95:20       0|1:100:52
+2      209330308       .       A       C       .       PASS    AA=C;DP=118     GT:GQ:DP        0|0:34:22       1|0:95:21       0|1:100:75
+X      26811797        rs1600338       A       T       .       PASS    AA=A;DP=71      GT:GQ:DP        0|0:35:10       0|1:100:10      0|0:81:27
+3      164043283       rs2080523       A       T       .       PASS    AA=T;DP=82      GT:GQ:DP        0|0:35:10       0|1:100:14      0|0:100:58
+8      4565175 .       T       C       .       PASS    AA=T;DP=62      GT:GQ:DP        0|0:35:10       0|1:100:15      0|0:100:37
+14     54584971        .       G       A       .       PASS    AA=G;DP=87      GT:GQ:DP        0|0:35:10       0|1:100:17      0|0:100:62
+X      38486061        .       A       G       .       PASS    AA=G;DP=101     GT:GQ:DP        0|0:35:10       0|1:100:19      0|0:100:38
+X      41303446        rs2998254       G       A       .       PASS    AA=A;DP=96      GT:GQ:DP        0|0:35:10       0|1:100:20      0|0:100:40
+11     80745268        rs7115501       A       C       .       PASS    AA=C;DP=66      GT:GQ:DP        0|0:35:10       0|1:100:20      0|0:72:24
+X      81272276        rs7891755       C       T       .       PASS    AA=C;DP=87      GT:GQ:DP        0|0:35:10       0|1:100:22      0|0:66:23
+X      124290753       .       G       A       .       PASS    AA=G;DP=110     GT:GQ:DP        0|0:35:10       0|1:100:23      0|0:78:27
+X      40537402        .       G       T       .       PASS    AA=T;DP=109     GT:GQ:DP        0|0:35:10       0|1:100:24      0|0:100:39
+2      140181129       .       C       A       .       PASS    AA=C;DP=115     GT:GQ:DP        0|0:35:10       0|1:100:24      0|0:100:76
+X      32677903        .       A       G       .       PASS    AA=A;DP=82      GT:GQ:DP        0|0:35:10       0|1:100:26      0|0:69:29
+X      6016157 rs5916298       G       A       .       PASS    AA=.;DP=102     GT:GQ:DP        0|0:35:10       0|1:100:28      0|0:90:31
+2      77971498        rs13019978      T       C       .       PASS    AA=T;DP=82      GT:GQ:DP        0|0:35:10       0|1:100:29      0|0:100:43
+X      34761904        rs7878372       G       A       .       PASS    AA=G;DP=125     GT:GQ:DP        0|0:35:10       0|1:100:29      0|0:100:48
+X      114200265       .       C       T       .       PASS    AA=c;DP=104     GT:GQ:DP        0|0:35:10       0|1:100:29      0|0:99:34
+X      94954399        .       T       A       .       PASS    AA=T;DP=113     GT:GQ:DP        0|0:35:10       0|1:100:31      0|0:69:23
+X      123416532       rs2884138       T       C       .       PASS    AA=T;DP=115     GT:GQ:DP        0|0:35:10       0|1:100:37      0|0:84:29
+X      114727747       rs9887400       C       T       .       PASS    AA=T;DP=106     GT:GQ:DP        0|0:35:10       0|1:98:18       0|0:99:35
+X      32332186        rs16990306      G       A       .       PASS    AA=N;DP=99      GT:GQ:DP        0|0:35:11       0|1:100:19      0|0:87:30
+X      124185443       rs5958711       G       C       .       PASS    AA=C;DP=112     GT:GQ:DP        0|0:35:11       0|1:100:20      0|0:87:29
+X      84588078        .       T       A       .       PASS    AA=T;DP=65      GT:GQ:DP        0|0:35:11       0|1:99:15       0|0:42:14
+X      105119827       rs58507472      C       T       .       PASS    AA=C;DP=81      GT:GQ:DP        0|0:35:11       1|0:100:18      0|1:100:25
+X      10203939        rs5934845       A       C       .       PASS    AA=C;DP=111     GT:GQ:DP        0|0:35:11       1|0:100:23      0|1:100:30
+X      138993008       rs5955382       T       A       .       PASS    AA=T;DP=88      GT:GQ:DP        0|0:35:11       1|0:100:25      0|1:100:19
+X      143523270       .       C       T       .       PASS    AA=C;DP=95      GT:GQ:DP        0|0:35:11       1|0:100:25      0|1:100:24
+X      55220238        .       A       G       .       PASS    AA=A;DP=97      GT:GQ:DP        0|0:35:11       1|0:100:25      0|1:100:26
+X      22643550        rs4332309       T       C       .       PASS    AA=T;DP=96      GT:GQ:DP        0|0:35:11       1|0:100:27      0|1:100:39
+X      136195706       rs12008544      T       G       .       PASS    AA=T;DP=115     GT:GQ:DP        0|0:35:11       1|0:100:28      0|1:100:41
+X      146807226       .       C       G       .       PASS    AA=C;DP=123     GT:GQ:DP        0|0:35:11       1|0:100:28      0|1:100:45
+X      31969840        rs56763539      C       T       .       PASS    AA=C;DP=104     GT:GQ:DP        0|0:35:11       1|0:100:31      0|1:100:35
+6      15474560        .       C       T       .       PASS    AA=C;DP=96      GT:GQ:DP        0|0:35:11       1|0:18:17       0|1:91:25
+14     43333402        rs17114413      C       G       .       PASS    AA=C;DP=68      GT:GQ:DP        0|0:35:11       1|0:52:11       0|1:100:45
+15     37048475        .       G       A       .       PASS    AA=g;DP=69      GT:GQ:DP        0|0:35:11       1|0:52:25       0|1:100:26
+X      126798356       .       T       C       .       PASS    AA=.;DP=81      GT:GQ:DP        0|0:35:11       1|0:63:14       0|1:100:25
+X      140849724       rs6634336       A       G       .       PASS    AA=a;DP=121     GT:GQ:DP        0|0:35:11       1|0:73:25       0|1:98:34
+5      4454586 .       G       A       .       PASS    AA=G;DP=66      GT:GQ:DP        0|0:35:11       1|0:82:15       0|1:100:28
+X      126220938       .       A       C       .       PASS    AA=A;DP=69      GT:GQ:DP        0|0:35:11       1|0:92:12       0|1:100:26
+4      136290007       rs58549911      C       T       .       PASS    AA=C;DP=72      GT:GQ:DP        0|0:35:11       1|0:93:16       0|1:100:45
+22     48825977        rs8138121       T       C       .       PASS    AA=t;DP=89      GT:GQ:DP        0|0:35:12       1|0:19:7        0|1:100:69
+4      118970278       rs1870483       T       G       .       PASS    AA=G;DP=80      GT:GQ:DP        0|0:35:13       1|0:83:17       0|1:100:47
+4      106801729       rs13110070      A       G       .       PASS    AA=A;DP=104     GT:GQ:DP        0|0:35:13       1|0:90:23       0|1:100:67
+18     25987816        rs34859507      C       T       .       PASS    AA=C;DP=107     GT:GQ:DP        0|0:35:15       0|1:100:28      0|0:72:24
+5      163022809       .       G       C       .       PASS    AA=G;DP=107     GT:GQ:DP        0|0:35:16       1|1:70:25       0|1:100:68
+11     6954161 rs7933973       C       A       .       PASS    AA=C;DP=96      GT:GQ:DP        0|0:35:17       1|0:80:19       0|1:100:58
+22     44718025        .       C       G       .       PASS    AA=G;DP=72      GT:GQ:DP        0|0:35:17       1|1:16:7        0|1:100:41
+12     88347992        .       G       T       .       PASS    AA=G;DP=94      GT:GQ:DP        0|0:35:18       1|0:75:16       0|1:100:57
+15     27199694        rs3751558       G       T       .       PASS    AA=T;DP=74      GT:GQ:DP        0|0:35:18       1|1:7:11        0|1:100:37
+4      163442846       .       T       G       .       PASS    AA=T;DP=92      GT:GQ:DP        0|0:35:19       1|0:57:27       0|1:100:39
+8      14115524        .       C       T       .       PASS    AA=C;DP=91      GT:GQ:DP        0|0:35:19       1|0:59:17       0|1:100:56
+7      111912774       rs2041068       T       G       .       PASS    AA=T;DP=104     GT:GQ:DP        0|0:35:20       1|1:44:26       0|1:100:58
+5      33600894        rs4146150       C       T       .       PASS    AA=T;DP=112     GT:GQ:DP        0|0:35:21       0|1:100:18      0|0:100:76
+10     67083849        .       G       A       .       PASS    AA=G;DP=98      GT:GQ:DP        0|0:35:21       0|1:100:19      0|0:100:54
+11     32000772        .       C       A       .       PASS    AA=C;DP=125     GT:GQ:DP        0|0:35:21       0|1:100:20      0|0:100:40
+3      85278350        rs13059053      C       T       .       PASS    AA=C;DP=79      GT:GQ:DP        0|0:35:21       0|1:100:22      0|0:99:36
+1      65471113        .       C       T       .       PASS    AA=C;DP=83      GT:GQ:DP        0|0:35:21       0|1:100:9       0|0:100:51
+22     33886167        rs2097564       G       A       .       PASS    AA=G;DP=102     GT:GQ:DP        0|0:35:22       1|0:100:20      0|1:100:61
+19     19774129        .       A       T       .       PASS    AA=-;DP=96      GT:GQ:DP        0|0:35:22       1|0:100:23      0|1:100:51
+13     111580680       rs7990052       G       T       .       PASS    AA=G;DP=114     GT:GQ:DP        0|0:35:22       1|0:34:17       0|1:100:74
+1      217758936       rs11118327      C       T       .       PASS    AA=C;DP=111;HM2;HM3     GT:GQ:DP        0|0:35:22       1|0:43:20       0|1:100:28
+17     37064499        .       G       C       .       PASS    AA=G;DP=111     GT:GQ:DP        0|0:35:22       1|0:50:9        0|1:100:80
+3      117774867       rs7651360       T       C       .       PASS    AA=T;DP=120     GT:GQ:DP        0|0:35:22       1|0:54:21       0|1:100:74
+14     99027456        rs2400677       T       C       .       PASS    AA=T;DP=109     GT:GQ:DP        0|0:35:22       1|0:68:15       0|1:100:73
+11     58168095        rs11229561      C       T       .       PASS    AA=T;DP=93      GT:GQ:DP        0|0:35:22       1|0:88:18       0|1:100:52
+14     35969716        rs7140243       T       G       .       PASS    AA=G;DP=126     GT:GQ:DP        0|0:35:27       1|1:61:22       0|1:100:76
+X      84428109        rs59145097      A       G       .       PASS    AA=a;DP=72      GT:GQ:DP        0|0:36:12       1|1:34:13       0|1:100:31
+21     19015111        rs28616110      T       C       .       PASS    AA=T;DP=84      GT:GQ:DP        0|0:36:12       1|1:37:15       0|1:100:58
+4      104621288       .       T       C       .       PASS    AA=t;DP=78      GT:GQ:DP        0|0:36:12       1|1:43:16       0|1:100:51
+X      123325801       rs12393085      C       T       .       PASS    AA=N;DP=71      GT:GQ:DP        0|0:36:12       1|1:43:17       0|1:100:30
+X      91487591        .       G       C       .       PASS    AA=G;DP=77      GT:GQ:DP        0|0:36:12       1|1:46:18       0|1:100:30
+X      65284240        rs806668        A       G       .       PASS    AA=A;DP=107     GT:GQ:DP        0|0:36:12       1|1:55:22       0|1:100:35
+X      98321522        rs5966936       G       A       .       PASS    AA=A;DP=88      GT:GQ:DP        0|0:36:12       1|1:58:21       0|1:100:27
+X      110969045       rs7053406       T       C       .       PASS    AA=C;DP=108     GT:GQ:DP        0|0:36:12       1|1:58:21       0|1:100:47
+X      96857496        rs11795691      T       C       .       PASS    AA=T;DP=88      GT:GQ:DP        0|0:36:12       1|1:61:22       0|1:100:29
+X      22835066        .       G       A       .       PASS    AA=g;DP=100     GT:GQ:DP        0|0:36:12       1|1:73:26       0|1:100:28
+15     49540148        rs977137        G       C       .       PASS    AA=G;DP=61      GT:GQ:DP        0|0:36:13       1|1:18:14       0|1:100:26
+X      85677986        rs2369272       T       C       .       PASS    AA=T;DP=76      GT:GQ:DP        0|0:36:13       1|1:19:9        0|1:96:24
+X      41831679        rs6610657       A       T       .       PASS    AA=A;DP=126     GT:GQ:DP        0|0:36:13       1|1:70:25       0|1:100:48
+X      31177611        rs5972350       C       G       .       PASS    AA=G;DP=87      GT:GQ:DP        0|0:36:13       1|1:76:27       0|1:100:23
+18     25760382        rs7231195       A       G       .       PASS    AA=a;DP=73      GT:GQ:DP        0|0:36:16       0|1:100:10      0|0:100:46
+15     54052971        rs7172569       A       G       .       PASS    AA=G;DP=77      GT:GQ:DP        0|0:36:17       1|0:68:15       0|1:100:32
+20     21426776        rs2180966       T       G       .       PASS    AA=T;DP=101     GT:GQ:DP        0|0:36:18       1|0:7:23        0|1:100:65
+7      129509748       .       C       A       .       PASS    AA=C;DP=92      GT:GQ:DP        0|0:36:19       0|1:100:11      0|0:100:60
+7      119802800       rs11769783      G       C       .       PASS    AA=C;DP=103     GT:GQ:DP        0|0:36:22       1|0:100:17      0|1:100:65
+5      77116524        rs254406        A       G       .       PASS    AA=a;DP=83      GT:GQ:DP        0|0:36:23       1|1:16:7        0|1:100:50
+10     50094708        rs58131680      C       T       .       PASS    AA=C;DP=102     GT:GQ:DP        0|0:36:23       1|1:20:17       0|1:100:62
+8      5856208 rs2703224       C       T       .       PASS    AA=T;DP=92      GT:GQ:DP        0|0:36:23       1|1:58:21       0|1:100:49
+7      83482669        .       C       A       .       PASS    AA=A;DP=108     GT:GQ:DP        0|0:36:23       1|1:61:28       0|1:100:47
+13     55917099        rs9569466       G       A       .       PASS    AA=G;DP=125     GT:GQ:DP        0|0:36:23       1|1:94:33       0|1:100:72
+12     21579911        .       G       A       .       PASS    AA=G;DP=109     GT:GQ:DP        0|0:36:26       1|0:36:16       0|1:100:64
+3      70129503        .       T       C       .       PASS    AA=T;DP=113     GT:GQ:DP        0|0:36:26       1|0:79:27       0|1:100:61
+2      76039956        rs1822186       G       A       .       PASS    AA=G;DP=104     GT:GQ:DP        0|0:36:27       1|1:61:22       0|1:100:56
+8      43895395        rs13252368      C       A       .       PASS    AA=.;DP=125     GT:GQ:DP        0|0:36:30       1|0:100:31      0|1:100:69
+18     27750074        rs12967531      G       A       .       PASS    AA=G;DP=104     GT:GQ:DP        0|0:36:31       1|0:84:15       0|1:100:59
+13     77855870        rs17069717      T       G       .       PASS    AA=T;DP=105     GT:GQ:DP        0|0:37:16       0|1:100:21      0|0:100:68
+11     4091038 rs11031004      C       T       .       PASS    AA=C;DP=82      GT:GQ:DP        0|0:37:18       0|1:100:22      0|0:100:41
+7      77882088        .       A       G       .       PASS    AA=A;DP=87      GT:GQ:DP        0|0:37:20       0|1:100:14      0|0:100:55
+15     23538085        .       A       G       .       PASS    AA=A;DP=91      GT:GQ:DP        0|0:37:20       0|1:100:26      0|0:100:43
+4      145785927       rs1355603       T       C       .       PASS    AA=C;DP=71      GT:GQ:DP        0|0:37:20       1|0:48:7        0|1:100:39
+1      245881000       rs28539796      C       T       .       PASS    AA=t;DP=89      GT:GQ:DP        0|0:37:21       0|1:100:17      0|0:100:50
+3      192585071       rs574911        T       C       .       PASS    AA=C;DP=104     GT:GQ:DP        0|0:37:21       0|1:100:22      0|0:100:60
+3      20414840        rs1520059       A       T       .       PASS    AA=A;DP=119     GT:GQ:DP        0|0:37:21       0|1:100:26      0|0:100:74
+X      16117970        .       G       A       .       PASS    AA=G;DP=155     GT:GQ:DP        0|0:37:21       0|1:100:40      0|0:100:44
+12     131538084       rs11146992      G       A       .       PASS    AA=G;DP=70      GT:GQ:DP        0|0:37:24       1|0:38:6        0|1:100:29
+3      83796581        .       G       A       .       PASS    AA=G;DP=110     GT:GQ:DP        0|0:37:27       1|1:31:23       0|1:100:60
+5      110085096       .       G       C       .       PASS    AA=G;DP=99      GT:GQ:DP        0|0:38:11       0|1:100:14      0|0:100:76
+13     84265414        .       T       C       .       PASS    AA=t;DP=61      GT:GQ:DP        0|0:38:11       0|1:100:14      0|0:81:27
+19     35705580        .       T       C       .       PASS    AA=T;DP=76      GT:GQ:DP        0|0:38:11       0|1:100:17      0|0:96:32
+10     66944664        .       T       C       .       PASS    AA=T;DP=80      GT:GQ:DP        0|0:38:11       0|1:100:19      0|0:100:53
+X      40753678        rs6610499       T       A       .       PASS    AA=A;DP=97      GT:GQ:DP        0|0:38:11       0|1:100:19      0|0:96:33
+14     45917895        rs7153809       T       C       .       PASS    AA=T;DP=80      GT:GQ:DP        0|0:38:11       0|1:100:21      0|0:100:47
+X      98083663        rs4827839       T       C       .       PASS    AA=T;DP=60      GT:GQ:DP        0|0:38:11       0|1:100:21      0|0:30:11
+X      95126121        rs2805978       A       G       .       PASS    AA=A;DP=89      GT:GQ:DP        0|0:38:11       0|1:100:21      0|0:72:24
+X      141549077       rs4825134       G       A       .       PASS    AA=A;DP=104     GT:GQ:DP        0|0:38:11       0|1:100:23      0|0:84:31
+X      104278629       .       T       A       .       PASS    AA=T;DP=122     GT:GQ:DP        0|0:38:11       0|1:100:23      0|0:99:33
+X      107990963       rs5942818       T       C       .       PASS    AA=C;DP=125     GT:GQ:DP        0|0:38:11       0|1:100:25      0|0:100:41
+X      78490408        rs12390160      T       C       .       PASS    AA=T;DP=112     GT:GQ:DP        0|0:38:11       0|1:100:29      0|0:87:29
+X      94813429        .       A       G       .       PASS    AA=a;DP=97      GT:GQ:DP        0|0:38:11       0|1:100:30      0|0:54:27
+X      106313325       .       A       T       .       PASS    AA=A;DP=99      GT:GQ:DP        0|0:38:11       0|1:100:30      0|0:75:28
+X      6091083 .       T       C       .       PASS    AA=.;DP=95      GT:GQ:DP        0|0:38:11       0|1:100:30      0|0:93:32
+10     67936430        rs1911349       A       T       .       PASS    AA=T;DP=97      GT:GQ:DP        0|0:38:12       0|1:100:14      0|0:100:59
+X      26548332        .       C       T       .       PASS    AA=c;DP=85      GT:GQ:DP        0|0:38:12       0|1:100:21      0|0:81:27
+X      87967418        .       G       A       .       PASS    AA=G;DP=112     GT:GQ:DP        0|0:38:12       0|1:100:22      0|0:100:43
+X      33895457        rs1553384       A       T       .       PASS    AA=a;DP=90      GT:GQ:DP        0|0:38:12       0|1:100:22      0|0:60:20
+X      25190849        .       A       C       .       PASS    AA=C;DP=108     GT:GQ:DP        0|0:38:12       0|1:100:24      0|0:100:40
+X      39611187        .       C       T       .       PASS    AA=C;DP=98      GT:GQ:DP        0|0:38:12       0|1:100:25      0|0:100:36
+X      136272146       rs10521783      G       A       .       PASS    AA=A;DP=138     GT:GQ:DP        0|0:38:12       0|1:100:30      0|0:100:45
+1      186032591       rs7519651       G       C       .       PASS    AA=G;DP=72;HM2  GT:GQ:DP        0|0:38:12       1|0:100:15      0|1:100:40
+X      8442339 .       A       G       .       PASS    AA=A;DP=97      GT:GQ:DP        0|0:38:12       1|0:100:18      0|1:100:43
+9      11328352        .       G       A       .       PASS    AA=G;DP=69      GT:GQ:DP        0|0:38:12       1|0:100:19      0|1:100:32
+X      81765222        .       G       T       .       PASS    AA=g;DP=77      GT:GQ:DP        0|0:38:12       1|0:100:21      0|1:100:22
+X      89158805        rs5941425       A       G       .       PASS    AA=.;DP=85      GT:GQ:DP        0|0:38:12       1|0:100:21      0|1:100:30
+13     62399458        .       C       T       .       PASS    AA=c;DP=98      GT:GQ:DP        0|0:38:12       1|0:100:21      0|1:100:66
+4      32311989        rs7662671       T       G       .       PASS    AA=G;DP=84      GT:GQ:DP        0|0:38:12       1|0:100:23      0|1:100:49
+12     73419099        rs7311220       T       C       .       PASS    AA=T;DP=81      GT:GQ:DP        0|0:38:12       1|0:100:24      0|1:100:31
+X      73066479        rs12013790      G       C       .       PASS    AA=G;DP=97      GT:GQ:DP        0|0:38:12       1|0:100:24      0|1:100:35
+X      140075629       .       C       T       .       PASS    AA=C;DP=94      GT:GQ:DP        0|0:38:12       1|0:100:25      0|1:100:29
+X      145080371       rs5966067       A       G       .       PASS    AA=A;DP=108     GT:GQ:DP        0|0:38:12       1|0:100:25      0|1:100:35
+X      145240190       rs11094327      G       A       .       PASS    AA=g;DP=113     GT:GQ:DP        0|0:38:12       1|0:100:26      0|1:100:35
+5      103613744       rs13160104      G       T       .       PASS    AA=N;DP=108     GT:GQ:DP        0|0:38:12       1|0:100:27      0|1:100:67
+14     44647793        rs11847336      A       G       .       PASS    AA=G;DP=82      GT:GQ:DP        0|0:38:12       1|0:100:30      0|1:100:28
+X      87868972        .       A       T       .       PASS    AA=G;DP=103     GT:GQ:DP        0|0:38:12       1|0:100:31      0|1:100:38
+1      12149553        .       G       A       .       PASS    AA=g;DP=51      GT:GQ:DP        0|0:38:12       1|0:27:4        0|1:100:31
+8      122129078       .       A       C       .       PASS    AA=C;DP=74      GT:GQ:DP        0|0:38:12       1|0:34:13       0|1:100:36
+X      141738322       rs5954869       T       C       .       PASS    AA=C;DP=97      GT:GQ:DP        0|0:38:12       1|0:47:22       0|1:100:32
+X      153284320       rs17849495      C       T       .       PASS    AA=c;DP=80      GT:GQ:DP        0|0:38:12       1|0:50:13       0|1:100:31
+2      137816639       rs12328442      G       C       .       PASS    AA=G;DP=75      GT:GQ:DP        0|0:38:12       1|0:51:21       0|1:100:42
+18     3252193 rs11650 T       C       .       PASS    AA=T;DP=77      GT:GQ:DP        0|0:38:12       1|0:64:11       0|1:100:54
+14     56083608        rs4143994       G       C       .       PASS    AA=G;DP=74      GT:GQ:DP        0|0:38:12       1|0:68:15       0|1:100:47
+X      33212622        .       C       T       .       PASS    AA=C;DP=74      GT:GQ:DP        0|0:38:12       1|0:74:23       0|1:100:18
+X      57529538        rs5915050       C       A       .       PASS    AA=.;DP=109     GT:GQ:DP        0|0:38:12       1|0:76:16       0|1:100:45
+10     29603082        .       A       G       .       PASS    AA=A;DP=82      GT:GQ:DP        0|0:38:12       1|0:81:18       0|1:100:52
+6      120580281       rs17082016      T       A       .       PASS    AA=T;DP=75      GT:GQ:DP        0|0:38:12       1|0:82:13       0|1:100:52
+2      156500977       .       T       C       .       PASS    AA=T;DP=84      GT:GQ:DP        0|0:38:12       1|0:83:19       0|1:100:54
+X      145736151       .       C       T       .       PASS    AA=C;DP=80      GT:GQ:DP        0|0:38:12       1|0:83:20       0|1:100:20
+2      4477042 rs11894128      G       A       .       PASS    AA=A;DP=96      GT:GQ:DP        0|0:38:12       1|0:84:20       0|1:100:62
+12     28871308        rs789131        A       C       .       PASS    AA=A;DP=84      GT:GQ:DP        0|0:38:12       1|0:85:10       0|1:100:61
+X      68542492        rs721940        T       C       .       PASS    AA=T;DP=103     GT:GQ:DP        0|0:38:12       1|0:88:16       0|1:100:38
+X      7662327 rs1544014       G       A       .       PASS    AA=A;DP=109     GT:GQ:DP        0|0:38:12       1|0:92:28       0|1:100:44
+X      39493236        .       C       T       .       PASS    AA=C;DP=80      GT:GQ:DP        0|0:38:12       1|0:95:15       0|1:100:38
+3      125890519       rs61154020      T       C       .       PASS    AA=T;DP=99      GT:GQ:DP        0|0:38:12       1|0:95:16       0|1:100:72
+X      16455698        rs6527690       A       G       .       PASS    AA=A;DP=82      GT:GQ:DP        0|0:38:12       1|0:95:17       0|1:100:45
+5      15879177        rs146351        G       A       .       PASS    AA=G;DP=106     GT:GQ:DP        0|0:38:12       1|0:96:28       0|1:100:68
+18     74092725        .       T       G       .       PASS    AA=T;DP=77      GT:GQ:DP        0|0:38:12       1|0:99:20       0|1:100:31
+7      118844474       .       T       C       .       PASS    AA=T;DP=93      GT:GQ:DP        0|0:38:12       1|0:99:21       0|1:100:63
+12     20788268        rs11045429      C       T       .       PASS    AA=T;DP=68      GT:GQ:DP        0|0:38:13       1|0:100:18      0|1:100:26
+X      111626207       .       T       C       .       PASS    AA=C;DP=88      GT:GQ:DP        0|0:38:13       1|0:41:16       0|1:100:37
+20     14277198        rs6110256       G       C       .       PASS    AA=G;DP=63      GT:GQ:DP        0|0:38:13       1|0:53:14       0|1:100:35
+X      138505817       .       C       T       .       PASS    AA=N;DP=87      GT:GQ:DP        0|0:38:13       1|0:67:19       0|1:100:25
+14     80395667        .       A       T       .       PASS    AA=N;DP=63      GT:GQ:DP        0|0:38:13       1|0:72:17       0|1:94:22
+4      61703774        rs12645168      C       T       .       PASS    AA=C;DP=91      GT:GQ:DP        0|0:38:13       1|0:79:24       0|1:100:49
+4      114812767       rs1011972       T       A       .       PASS    AA=A;DP=69      GT:GQ:DP        0|0:38:13       1|0:81:12       0|1:100:45
+X      142641087       rs5907473       G       A       .       PASS    AA=A;DP=108     GT:GQ:DP        0|0:38:13       1|0:81:30       0|1:100:41
+8      17860180        .       T       C       .       PASS    AA=T;DP=74      GT:GQ:DP        0|0:38:14       1|0:100:17      0|1:100:44
+9      106908548       rs2937369       C       G       .       PASS    AA=c;DP=88      GT:GQ:DP        0|0:38:14       1|0:100:23      0|1:100:47
+7      9343723 .       T       C       .       PASS    AA=T;DP=101     GT:GQ:DP        0|0:38:14       1|0:100:25      0|1:100:66
+6      80581228        .       G       A       .       PASS    AA=G;DP=93      GT:GQ:DP        0|0:38:17       0|1:100:15      0|0:100:62
+3      99453438        .       A       T       .       PASS    AA=A;DP=115     GT:GQ:DP        0|0:38:18       0|1:100:27      0|0:100:72
+7      140810011       .       A       G       .       PASS    AA=A;DP=112     GT:GQ:DP        0|0:38:18       1|0:100:18      0|1:100:76
+5      165139790       rs12516499      G       A       .       PASS    AA=G;DP=95      GT:GQ:DP        0|0:38:19       1|0:100:20      0|1:100:58
+20     6263153 rs58289778      G       T       .       PASS    AA=G;DP=89      GT:GQ:DP        0|0:38:19       1|0:100:21      0|1:100:47
+15     93155078        .       G       A       .       PASS    AA=G;DP=70      GT:GQ:DP        0|0:38:19       1|0:47:10       0|1:100:33
+21     46221953        rs7275644       C       A       .       PASS    AA=C;DP=67      GT:GQ:DP        0|0:38:19       1|0:80:12       0|1:100:27
+1      184720693       .       C       T       .       PASS    AA=C;DP=109     GT:GQ:DP        0|0:38:19       1|0:99:19       0|1:100:71
+6      131041643       .       T       A       .       PASS    AA=T;DP=110     GT:GQ:DP        0|0:38:22       0|1:100:13      0|0:100:74
+16     57212255        .       G       A       .       PASS    AA=G;DP=91      GT:GQ:DP        0|0:38:22       0|1:100:20      0|0:100:47
+4      31872321        rs28582104      G       T       .       PASS    AA=G;DP=93      GT:GQ:DP        0|0:38:22       0|1:100:20      0|0:100:52
+7      77988629        .       T       C       .       PASS    AA=T;DP=85      GT:GQ:DP        0|0:38:22       0|1:100:20      0|0:90:30
+1      239034957       rs10926355      T       G       .       PASS    AA=T;DP=104;HM2 GT:GQ:DP        0|0:38:22       0|1:100:21      0|0:100:62
+14     42482262        .       G       C       .       PASS    AA=G;DP=114     GT:GQ:DP        0|0:38:22       0|1:100:22      0|0:93:31
+8      88830339        rs12547416      C       T       .       PASS    AA=T;DP=89      GT:GQ:DP        0|0:38:22       0|1:100:25      0|0:100:42
+5      40983897        .       G       C       .       PASS    AA=C;DP=118     GT:GQ:DP        0|0:38:22       0|1:100:26      0|0:53:29
+8      59345277        rs13260640      C       T       .       PASS    AA=T;DP=109     GT:GQ:DP        0|0:38:22       1|0:100:25      0|1:100:62
+7      85342539        rs10808063      C       A       .       PASS    AA=c;DP=105     GT:GQ:DP        0|0:38:22       1|1:25:20       0|1:100:62
+8      5299772 rs7837834       A       T       .       PASS    AA=A;DP=93      GT:GQ:DP        0|0:38:22       1|1:43:16       0|1:100:53
+9      97262507        rs57605032      G       A       .       PASS    AA=G;DP=124     GT:GQ:DP        0|0:38:23       1|0:100:19      0|1:100:83
+4      34981502        .       A       G       .       PASS    AA=A;DP=87      GT:GQ:DP        0|0:38:23       1|0:100:20      0|1:100:25
+8      118931235       rs11780721      T       C       .       PASS    AA=T;DP=137     GT:GQ:DP        0|0:38:23       1|0:100:22      0|1:100:86
+19     3309121 .       A       C       .       PASS    AA=a;DP=140     GT:GQ:DP        0|0:38:23       1|0:100:23      0|1:100:95
+16     77930940        rs28539298      G       A       .       PASS    AA=G;DP=140     GT:GQ:DP        0|0:38:23       1|0:100:25      0|1:100:47
+10     58285889        rs1608110       G       A       .       PASS    AA=G;DP=124     GT:GQ:DP        0|0:38:23       1|0:100:25      0|1:100:76
+19     8632771 rs2967726       G       A       .       PASS    AA=G;DP=131     GT:GQ:DP        0|0:38:23       1|0:100:27      0|1:100:80
+13     54144262        rs9536802       C       G       .       PASS    AA=G;DP=79      GT:GQ:DP        0|0:38:23       1|0:54:15       0|1:100:41
+5      41157912        rs56909233      A       G       .       PASS    AA=A;DP=93      GT:GQ:DP        0|0:38:23       1|0:63:16       0|1:100:53
+18     6353309 rs11877713      A       C       .       PASS    AA=A;DP=77      GT:GQ:DP        0|0:38:23       1|0:67:14       0|1:100:31
+15     94804914        .       A       G       .       PASS    AA=A;DP=105     GT:GQ:DP        0|0:38:23       1|0:67:16       0|1:100:45
+7      1177538 rs7810448       T       G       .       PASS    AA=G;DP=94      GT:GQ:DP        0|0:38:23       1|0:81:13       0|1:100:50
+8      18161785        rs10503611      A       C       .       PASS    AA=.;DP=99      GT:GQ:DP        0|0:38:23       1|0:82:22       0|1:100:54
+3      156556033       rs4561871       C       G       .       PASS    AA=C;DP=116     GT:GQ:DP        0|0:38:24       1|1:37:17       0|1:100:77
+8      87844698        rs16917400      G       T       .       PASS    AA=G;DP=110     GT:GQ:DP        0|0:38:24       1|1:55:20       0|1:100:68
+17     67689247        rs60887432      C       A       .       PASS    AA=C;DP=105     GT:GQ:DP        0|0:38:24       1|1:58:21       0|1:100:58
+8      133225288       rs2469614       G       A       .       PASS    AA=A;DP=112     GT:GQ:DP        0|0:38:24       1|1:58:21       0|1:100:69
+8      5840759 .       T       G       .       PASS    AA=T;DP=106     GT:GQ:DP        0|0:38:24       1|1:76:28       0|1:100:56
+2      52607192        .       C       T       .       PASS    AA=C;DP=95      GT:GQ:DP        0|0:39:13       1|0:45:14       0|1:100:63
+X      67908825        rs11796375      C       T       .       PASS    AA=c;DP=132     GT:GQ:DP        0|0:39:13       1|1:100:38      0|1:100:46
+X      127251100       rs240209        T       G       .       PASS    AA=T;DP=79      GT:GQ:DP        0|0:39:13       1|1:14:15       0|1:100:21
+1      152999847       rs10908437      C       A       .       PASS    AA=A;DP=59      GT:GQ:DP        0|0:39:13       1|1:16:7        0|1:100:28
+4      35212506        rs58513467      A       G       .       PASS    AA=A;DP=64      GT:GQ:DP        0|0:39:13       1|1:22:14       0|1:100:27
+3      87972358        rs28786223      G       A       .       PASS    AA=G;DP=102     GT:GQ:DP        0|0:39:13       1|1:28:22       0|1:100:52
+X      84782788        rs4645690       A       G       .       PASS    AA=G;DP=97      GT:GQ:DP        0|0:39:13       1|1:29:24       0|1:100:30
+1      194680914       rs57291296      T       G       .       PASS    AA=G;DP=80      GT:GQ:DP        0|0:39:13       1|1:40:15       0|1:100:50
+X      85106491        .       C       G       .       PASS    AA=C;DP=109     GT:GQ:DP        0|0:39:13       1|1:45:28       0|1:100:32
+X      13341790        rs1982043       T       C       .       PASS    AA=C;DP=89      GT:GQ:DP        0|0:39:13       1|1:49:18       0|1:100:17
+X      124540408       rs2157147       A       G       .       PASS    AA=a;DP=99      GT:GQ:DP        0|0:39:13       1|1:49:18       0|1:100:31
+1      186669593       rs10158119      T       G       .       PASS    AA=T;DP=81;HM2  GT:GQ:DP        0|0:39:13       1|1:55:20       0|1:100:46
+7      16059030        rs13221934      T       C       .       PASS    AA=T;DP=99      GT:GQ:DP        0|0:39:13       1|1:61:22       0|1:100:53
+3      148255337       .       A       G       .       PASS    AA=A;DP=87      GT:GQ:DP        0|0:39:13       1|1:64:23       0|1:100:50
+X      39029205        rs1393532       G       A       .       PASS    AA=A;DP=84      GT:GQ:DP        0|0:39:13       1|1:67:24       0|1:100:20
+19     39763195        .       G       A       .       PASS    AA=N;DP=72      GT:GQ:DP        0|0:39:13       1|1:6:8 0|1:100:42
+2      165607769       rs11895339      G       A       .       PASS    AA=A;DP=113     GT:GQ:DP        0|0:39:14       1|1:24:19       0|1:100:81
+7      88296513        rs10231039      A       T       .       PASS    AA=A;DP=84      GT:GQ:DP        0|0:39:14       1|1:55:20       0|1:100:50
+10     82308983        rs7900954       C       T       .       PASS    AA=T;DP=63      GT:GQ:DP        0|0:39:15       1|1:28:11       0|1:100:36
+15     53821823        .       C       T       .       PASS    AA=C;DP=74      GT:GQ:DP        0|0:39:16       1|0:73:10       0|1:100:47
+4      32368824        .       T       G       .       PASS    AA=T;DP=71      GT:GQ:DP        0|0:39:18       1|0:100:13      0|1:100:40
+13     100797114       .       C       T       .       PASS    AA=C;DP=119     GT:GQ:DP        0|0:39:21       0|1:100:21      0|0:100:78
+8      99198825        rs2071597       A       G       .       PASS    AA=C;DP=78      GT:GQ:DP        0|0:39:21       1|0:21:9        0|1:100:49
+10     133007011       rs10765065      A       G       .       PASS    AA=A;DP=114     GT:GQ:DP        0|0:39:21       1|1:52:20       0|1:100:72
+14     35209505        .       G       A       .       PASS    AA=G;DP=111     GT:GQ:DP        0|0:39:22       0|1:100:22      0|0:100:65
+20     15263658        rs6043215       T       A       .       PASS    AA=A;DP=116     GT:GQ:DP        0|0:39:22       1|0:100:18      0|1:100:79
+7      89472642        rs7780590       C       T       .       PASS    AA=C;DP=97      GT:GQ:DP        0|0:39:22       1|0:100:27      0|1:100:48
+3      141746259       rs349559        A       G       .       PASS    AA=G;DP=75      GT:GQ:DP        0|0:39:22       1|1:13:8        0|1:100:35
+6      27636622        rs6915266       G       A       .       PASS    AA=G;DP=113     GT:GQ:DP        0|0:39:22       1|1:58:21       0|1:100:68
+1      236742212       rs58244810      G       T       .       PASS    AA=G;DP=105     GT:GQ:DP        0|0:39:25       1|1:52:20       0|1:100:62
+8      6103708 rs12548128      G       T       .       PASS    AA=T;DP=86      GT:GQ:DP        0|0:39:27       1|0:72:13       0|1:100:34
+9      132028530       rs2277200       T       G       .       PASS    AA=N;DP=145     GT:GQ:DP        0|0:39:28       0|1:100:13      0|0:100:101
+13     88295154        .       C       T       .       PASS    AA=c;DP=66      GT:GQ:DP        0|0:3:16        1|0:59:16       0|1:100:32
+5      103735978       rs35766256      C       A       .       PASS    AA=C;DP=128     GT:GQ:DP        0|0:3:20        0|1:100:32      0|0:100:77
+2      89030830        .       T       C       .       PASS    AA=T;DP=89      GT:GQ:DP        0|0:40:13       1|0:52:30       0|1:84:34
+6      110778485       rs7773179       T       G       .       PASS    AA=G;DP=110     GT:GQ:DP        0|0:40:19       0|1:100:23      0|0:100:70
+19     13399362        rs16979079      C       T       .       PASS    AA=C;DP=82      GT:GQ:DP        0|0:40:19       1|0:69:23       0|1:100:30
+8      100260990       rs10808362      T       A       .       PASS    AA=A;DP=102     GT:GQ:DP        0|0:40:19       1|1:49:19       0|1:100:66
+12     98617554        rs10860494      C       A       .       PASS    AA=A;DP=102     GT:GQ:DP        0|0:40:20       0|1:100:25      0|0:100:58
+4      63408138        .       T       C       .       PASS    AA=T;DP=110     GT:GQ:DP        0|0:40:20       0|1:100:29      0|0:100:57
+11     13656847        rs7129719       C       T       .       PASS    AA=T;DP=103     GT:GQ:DP        0|0:40:20       1|0:100:27      0|1:100:52
+18     60084244        rs9945102       C       T       .       PASS    AA=C;DP=96      GT:GQ:DP        0|0:40:22       1|0:40:17       0|1:100:57
+3      63836281        .       C       A       .       PASS    AA=C;DP=116     GT:GQ:DP        0|0:40:23       1|0:100:22      0|1:100:73
+8      60390500        rs61045293      G       T       .       PASS    AA=G;DP=120     GT:GQ:DP        0|0:40:24       1|0:100:16      0|1:100:81
+6      54634621        rs12193903      C       A       .       PASS    AA=C;DP=103     GT:GQ:DP        0|0:40:24       1|0:100:18      0|1:100:58
+7      12495518        .       A       G       .       PASS    AA=A;DP=109     GT:GQ:DP        0|0:40:24       1|0:100:18      0|1:100:63
+7      113092269       .       T       C       .       PASS    AA=T;DP=106     GT:GQ:DP        0|0:40:24       1|0:100:27      0|1:100:57
+8      48013683        .       A       G       .       PASS    AA=A;DP=109     GT:GQ:DP        0|0:40:24       1|0:64:14       0|1:100:24
+18     29734037        rs2123334       T       C       .       PASS    AA=T;DP=105     GT:GQ:DP        0|0:40:24       1|0:68:19       0|1:100:49
+2      123874809       rs6541901       G       T       .       PASS    AA=G;DP=91      GT:GQ:DP        0|0:40:24       1|0:89:15       0|1:100:50
+12     9058108 rs2159960       C       A       .       PASS    AA=a;DP=110     GT:GQ:DP        0|0:40:24       1|0:96:23       0|1:100:59
+8      17234461        rs11987652      A       T       .       PASS    AA=A;DP=138     GT:GQ:DP        0|0:40:24       1|0:96:25       0|1:100:90
+11     121385015       .       G       T       .       PASS    AA=G;DP=101     GT:GQ:DP        0|0:40:25       0|1:100:17      0|0:100:61
+5      151091606       rs60498649      C       A       .       PASS    AA=A;DP=101     GT:GQ:DP        0|0:40:28       0|1:100:23      0|0:95:51
+4      171784492       rs7688897       C       T       .       PASS    AA=T;DP=101     GT:GQ:DP        0|0:40:28       1|0:100:15      0|1:100:58
+X      149203995       rs2368856       T       C       .       PASS    AA=T;DP=90      GT:GQ:DP        0|0:41:12       0|1:100:11      0|0:100:34
+X      34365730        rs12395785      G       A       .       PASS    AA=G;DP=88      GT:GQ:DP        0|0:41:12       0|1:100:11      0|0:100:41
+3      138821191       rs7626258       C       T       .       PASS    AA=C;DP=85      GT:GQ:DP        0|0:41:12       0|1:100:14      0|0:100:60
+4      134207569       rs35881015      C       G       .       PASS    AA=C;DP=76      GT:GQ:DP        0|0:41:12       0|1:100:15      0|0:100:53
+10     4991908 rs11814708      A       T       .       PASS    AA=A;DP=58      GT:GQ:DP        0|0:41:12       0|1:100:15      0|0:84:31
+10     57393895        rs7894694       C       T       .       PASS    AA=T;DP=100     GT:GQ:DP        0|0:41:12       0|1:100:16      0|0:100:69
+X      93262098        .       T       C       .       PASS    AA=T;DP=79      GT:GQ:DP        0|0:41:12       0|1:100:16      0|0:54:18
+1      215101532       .       G       A       .       PASS    AA=A;DP=92      GT:GQ:DP        0|0:41:12       0|1:100:17      0|0:100:63
+9      15333613        rs1215129       A       G       .       PASS    AA=A;DP=98      GT:GQ:DP        0|0:41:12       0|1:100:17      0|0:100:72
+6      99201111        rs62422279      C       T       .       PASS    AA=T;DP=107     GT:GQ:DP        0|0:41:12       0|1:100:18      0|0:100:35
+X      107068912       .       A       G       .       PASS    AA=A;DP=106     GT:GQ:DP        0|0:41:12       0|1:100:18      0|0:78:33
+X      125387698       .       G       A       .       PASS    AA=G;DP=89      GT:GQ:DP        0|0:41:12       0|1:100:19      0|0:100:36
+X      67718775        .       C       T       .       PASS    AA=C;DP=99      GT:GQ:DP        0|0:41:12       0|1:100:19      0|0:80:35
+X      28159442        .       C       T       .       PASS    AA=C;DP=95      GT:GQ:DP        0|0:41:12       0|1:100:19      0|0:84:28
+8      52039344        .       T       G       .       PASS    AA=T;DP=77      GT:GQ:DP        0|0:41:12       0|1:100:20      0|0:100:44
+4      81362779        .       T       C       .       PASS    AA=T;DP=81      GT:GQ:DP        0|0:41:12       0|1:100:21      0|0:100:47
+X      95039075        rs7889627       G       A       .       PASS    AA=G;DP=85      GT:GQ:DP        0|0:41:12       0|1:100:21      0|0:84:28
+4      59262705        rs17827323      T       A       .       PASS    AA=T;DP=98      GT:GQ:DP        0|0:41:12       0|1:100:22      0|0:100:65
+X      85276037        .       G       A       .       PASS    AA=A;DP=89      GT:GQ:DP        0|0:41:12       0|1:100:22      0|0:81:27
+X      20172602        .       C       T       .       PASS    AA=T;DP=106     GT:GQ:DP        0|0:41:12       0|1:100:23      0|0:100:41
+14     56340278        .       C       T       .       PASS    AA=C;DP=89      GT:GQ:DP        0|0:41:12       0|1:100:25      0|0:100:51
+X      143221691       rs34678035      T       C       .       PASS    AA=T;DP=116     GT:GQ:DP        0|0:41:12       0|1:100:28      0|0:99:33
+X      25558253        .       A       G       .       PASS    AA=A;DP=98      GT:GQ:DP        0|0:41:12       0|1:100:29      0|0:100:34
+X      84193913        rs4828320       C       T       .       PASS    AA=c;DP=116     GT:GQ:DP        0|0:41:12       0|1:100:34      0|0:100:41
+X      18588611        rs10465354      C       A       .       PASS    AA=A;DP=63      GT:GQ:DP        0|0:41:12       0|1:87:13       0|0:51:17
+6      123672636       rs2873533       A       G       .       PASS    AA=A;DP=82      GT:GQ:DP        0|0:41:13       0|1:100:16      0|0:100:55
+9      11773923        rs1486816       C       A       .       PASS    AA=A;DP=118     GT:GQ:DP        0|0:41:13       0|1:100:17      0|0:100:50
+18     67652776        .       C       T       .       PASS    AA=C;DP=78      GT:GQ:DP        0|0:41:13       0|1:100:21      0|0:100:41
+X      103645916       rs12397217      G       C       .       PASS    AA=g;DP=94      GT:GQ:DP        0|0:41:13       0|1:100:21      0|0:78:28
+X      130750793       rs5932984       A       G       .       PASS    AA=.;DP=131     GT:GQ:DP        0|0:41:13       0|1:100:24      0|0:100:37
+2      142903308       .       C       T       .       PASS    AA=C;DP=93      GT:GQ:DP        0|0:41:13       0|1:100:24      0|0:100:56
+X      31250784        .       G       A       .       PASS    AA=G;DP=93      GT:GQ:DP        0|0:41:13       0|1:100:27      0|0:69:23
+15     93032687        rs2619165       A       T       .       PASS    AA=T;DP=69      GT:GQ:DP        0|0:41:13       1|0:100:15      0|1:100:42
+8      63698712        .       G       A       .       PASS    AA=G;DP=70      GT:GQ:DP        0|0:41:13       1|0:100:15      0|1:100:42
+X      133982507       .       T       C       .       PASS    AA=T;DP=92      GT:GQ:DP        0|0:41:13       1|0:100:16      0|1:100:32
+8      79799073        rs2046339       T       C       .       PASS    AA=T;DP=76      GT:GQ:DP        0|0:41:13       1|0:100:16      0|1:100:45
+X      123601461       rs16999329      T       C       .       PASS    AA=T;DP=93      GT:GQ:DP        0|0:41:13       1|0:100:17      0|1:100:22
+4      114053669       .       G       A       .       PASS    AA=A;DP=74      GT:GQ:DP        0|0:41:13       1|0:100:17      0|1:100:31
+9      117283201       rs7039914       C       T       .       PASS    AA=C;DP=88      GT:GQ:DP        0|0:41:13       1|0:100:17      0|1:100:56
+7      88437117        .       A       C       .       PASS    AA=A;DP=71      GT:GQ:DP        0|0:41:13       1|0:100:18      0|1:100:40
+X      95469597        rs1209310       A       T       .       PASS    AA=A;DP=91      GT:GQ:DP        0|0:41:13       1|0:100:19      0|1:100:25
+2      17030690        rs13023785      T       C       .       PASS    AA=T;DP=82      GT:GQ:DP        0|0:41:13       1|0:100:19      0|1:100:47
+11     36603445        .       A       C       .       PASS    AA=A;DP=94      GT:GQ:DP        0|0:41:13       1|0:100:20      0|1:100:57
+X      145995607       rs7879828       C       T       .       PASS    AA=C;DP=88      GT:GQ:DP        0|0:41:13       1|0:100:21      0|1:100:26
+X      27627756        rs6526697       A       G       .       PASS    AA=A;DP=97      GT:GQ:DP        0|0:41:13       1|0:100:21      0|1:100:33
+13     37287045        rs9576363       T       G       .       PASS    AA=T;DP=77      GT:GQ:DP        0|0:41:13       1|0:100:21      0|1:100:42
+8      96137064        .       G       A       .       PASS    AA=A;DP=81      GT:GQ:DP        0|0:41:13       1|0:100:21      0|1:100:48
+9      74823793        .       T       C       .       PASS    AA=T;DP=80      GT:GQ:DP        0|0:41:13       1|0:100:22      0|1:100:39
+X      63768875        .       C       T       .       PASS    AA=c;DP=78      GT:GQ:DP        0|0:41:13       1|0:100:23      0|1:100:28
+X      23984502        rs4969555       A       G       .       PASS    AA=A;DP=120     GT:GQ:DP        0|0:41:13       1|0:100:23      0|1:100:46
+20     14784706        rs6079582       C       T       .       PASS    AA=C;DP=85      GT:GQ:DP        0|0:41:13       1|0:100:25      0|1:95:18
+X      26979412        rs16987717      T       A       .       PASS    AA=T;DP=107     GT:GQ:DP        0|0:41:13       1|0:100:26      0|1:100:37
+X      25696615        rs61209429      G       T       .       PASS    AA=g;DP=126     GT:GQ:DP        0|0:41:13       1|0:100:26      0|1:100:47
+X      46381097        rs5952916       G       C       .       PASS    AA=G;DP=107     GT:GQ:DP        0|0:41:13       1|0:100:29      0|1:100:23
+X      104637695       .       C       T       .       PASS    AA=C;DP=105     GT:GQ:DP        0|0:41:13       1|0:100:29      0|1:100:26
+X      86982449        rs2146530       C       T       .       PASS    AA=C;DP=104     GT:GQ:DP        0|0:41:13       1|0:100:29      0|1:100:27
+14     45986736        .       A       G       .       PASS    AA=A;DP=80      GT:GQ:DP        0|0:41:13       1|0:14:19       0|1:100:47
+16     6732189 rs10852677      A       G       .       PASS    AA=A;DP=82      GT:GQ:DP        0|0:41:13       1|0:29:14       0|1:100:53
+X      14017204        .       C       T       .       PASS    AA=C;DP=65      GT:GQ:DP        0|0:41:13       1|0:48:13       0|1:100:30
+X      100841164       rs12116031      T       C       .       PASS    AA=T;DP=76      GT:GQ:DP        0|0:41:13       1|0:50:16       0|1:100:25
+3      115230136       .       T       C       .       PASS    AA=T;DP=75      GT:GQ:DP        0|0:41:13       1|0:62:10       0|1:100:40
+11     46098399        .       T       A       .       PASS    AA=T;DP=72      GT:GQ:DP        0|0:41:13       1|0:72:16       0|1:87:43
+X      12803756        rs5743747       G       A       .       PASS    AA=g;DP=104     GT:GQ:DP        0|0:41:13       1|0:74:19       0|1:100:46
+X      141794984       rs5954891       A       C       .       PASS    AA=C;DP=115     GT:GQ:DP        0|0:41:13       1|0:79:21       0|1:100:33
+12     58274949        rs7316361       T       G       .       PASS    AA=T;DP=72      GT:GQ:DP        0|0:41:13       1|0:87:12       0|1:100:46
+5      161143000       rs36001274      C       T       .       PASS    AA=c;DP=78      GT:GQ:DP        0|0:41:13       1|0:89:15       0|1:100:47
+9      29863101        rs10969424      T       G       .       PASS    AA=T;DP=80      GT:GQ:DP        0|0:41:13       1|0:91:18       0|1:100:49
+X      46508231        rs28801476      G       A       .       PASS    AA=A;DP=95      GT:GQ:DP        0|0:41:13       1|0:95:21       0|1:100:22
+4      158806088       rs6839727       C       T       .       PASS    AA=C;DP=92      GT:GQ:DP        0|0:41:13       1|0:99:18       0|1:100:62
+13     93417250        rs9524290       A       G       .       PASS    AA=A;DP=109     GT:GQ:DP        0|0:41:14       0|1:100:27      0|0:100:68
+X      101774488       .       A       G       .       PASS    AA=a;DP=70      GT:GQ:DP        0|0:41:14       1|0:100:17      0|1:100:23
+X      28593412        .       C       T       .       PASS    AA=C;DP=91      GT:GQ:DP        0|0:41:14       1|0:100:18      0|1:100:37
+X      5723718 rs12014177      C       T       .       PASS    AA=c;DP=91      GT:GQ:DP        0|0:41:14       1|0:100:19      0|1:100:31
+3      179667807       .       A       G       .       PASS    AA=A;DP=125     GT:GQ:DP        0|0:41:14       1|0:100:25      0|1:100:45
+X      112089232       .       T       C       .       PASS    AA=t;DP=114     GT:GQ:DP        0|0:41:14       1|0:100:33      0|1:100:36
+X      20024052        rs12396210      C       T       .       PASS    AA=c;DP=76      GT:GQ:DP        0|0:41:14       1|0:70:21       0|1:100:29
+12     72928074        rs57932700      T       G       .       PASS    AA=T;DP=108     GT:GQ:DP        0|0:41:14       1|0:84:16       0|1:100:54
+7      54718872        rs13240524      G       A       .       PASS    AA=A;DP=89      GT:GQ:DP        0|0:41:14       1|0:94:26       0|1:100:51
+X      55378662        rs11091412      C       T       .       PASS    AA=T;DP=106     GT:GQ:DP        0|0:41:14       1|0:97:25       0|1:100:42
+X      27829327        rs7055843       A       G       .       PASS    AA=G;DP=115     GT:GQ:DP        0|0:41:15       1|0:100:27      0|1:100:37
+5      115448559       .       G       A       .       PASS    AA=G;DP=61      GT:GQ:DP        0|0:41:15       1|0:21:6        0|1:100:33
+4      156958666       rs17033588      A       G       .       PASS    AA=A;DP=75      GT:GQ:DP        0|0:41:17       1|0:100:19      0|1:100:28
+X      28870111        .       A       T       .       PASS    AA=A;DP=113     GT:GQ:DP        0|0:41:18       0|1:100:29      0|0:90:30
+12     124919272       rs28540857      A       G       .       PASS    AA=a;DP=74      GT:GQ:DP        0|0:41:19       1|0:62:12       0|1:100:42
+6      9029228 rs9505627       A       T       .       PASS    AA=T;DP=127     GT:GQ:DP        0|0:41:22       1|0:73:22       0|1:100:42
+12     14460209        .       A       C       .       PASS    AA=A;DP=75      GT:GQ:DP        0|0:41:23       0|1:100:15      0|0:100:36
+7      20046954        rs7783402       A       G       .       PASS    AA=G;DP=118     GT:GQ:DP        0|0:41:23       0|1:100:18      0|0:100:74
+11     10649363        .       G       A       .       PASS    AA=G;DP=92      GT:GQ:DP        0|0:41:23       0|1:100:21      0|0:100:48
+19     42018124        rs2431776       G       T       .       PASS    AA=G;DP=106     GT:GQ:DP        0|0:41:23       0|1:100:23      0|0:100:57
+3      7196013 rs9855840       T       A       .       PASS    AA=T;DP=102     GT:GQ:DP        0|0:41:23       0|1:100:24      0|0:100:54
+18     40851181        rs948706        C       A       .       PASS    AA=A;DP=105     GT:GQ:DP        0|0:41:23       1|0:94:15       0|1:100:66
+22     15822739        rs11089387      T       C       .       PASS    AA=.;DP=85      GT:GQ:DP        0|0:41:23       1|1:22:10       0|1:100:52
+2      225783175       rs13017388      G       T       .       PASS    AA=G;DP=137     GT:GQ:DP        0|0:41:23       1|1:47:33       0|1:100:83
+1      192438693       rs60277362      G       A       .       PASS    AA=G;DP=90      GT:GQ:DP        0|0:41:25       1|1:28:11       0|1:100:54
+2      74478289        rs6751601       A       G       .       PASS    AA=G;DP=101     GT:GQ:DP        0|0:41:25       1|1:31:12       0|1:100:68
+14     58979506        rs7151321       A       G       .       PASS    AA=A;DP=109     GT:GQ:DP        0|0:41:25       1|1:55:22       0|1:100:56
+11     40468187        rs1039038       C       A       .       PASS    AA=A;DP=114     GT:GQ:DP        0|0:41:25       1|1:64:24       0|1:100:63
+21     40123159        rs56075960      A       T       .       PASS    AA=T;DP=71      GT:GQ:DP        0|0:41:25       1|1:8:4 0|1:100:39
+2      137707281       .       A       G       .       PASS    AA=A;DP=151     GT:GQ:DP        0|0:41:26       0|1:100:28      0|0:100:46
+6      52220676        .       T       C       .       PASS    AA=T;DP=102     GT:GQ:DP        0|0:41:28       1|0:100:18      0|1:33:56
+5      36278111        rs10075150      A       G       .       PASS    AA=G;DP=111     GT:GQ:DP        0|0:41:28       1|0:60:14       0|1:100:68
+X      1738304 .       C       T       .       PASS    AA=.;DP=117     GT:GQ:DP        0|0:41:45       1|0:100:26      0|1:38:45
+3      95756292        rs13097736      T       C       .       PASS    AA=T;DP=79      GT:GQ:DP        0|0:42:14       1|1:10:17       0|1:100:47
+X      133835910       .       G       C       .       PASS    AA=G;DP=109     GT:GQ:DP        0|0:42:14       1|1:14:23       0|1:100:51
+6      51653051        rs1507912       C       T       .       PASS    AA=C;DP=70      GT:GQ:DP        0|0:42:14       1|1:27:14       0|1:100:43
+6      34038714        .       G       A       .       PASS    AA=G;DP=91      GT:GQ:DP        0|0:42:14       1|1:34:16       0|1:100:59
+8      5196158 rs7831910       C       T       .       PASS    AA=T;DP=88      GT:GQ:DP        0|0:42:14       1|1:37:14       0|1:100:50
+21     22192192        rs8132732       T       C       .       PASS    AA=C;DP=80      GT:GQ:DP        0|0:42:14       1|1:37:14       0|1:100:51
+X      86402561        .       G       C       .       PASS    AA=G;DP=110     GT:GQ:DP        0|0:42:14       1|1:38:20       0|1:100:33
+11     123706365       rs11820189      A       G       .       PASS    AA=A;DP=77      GT:GQ:DP        0|0:42:14       1|1:39:18       0|1:100:46
+X      50381078        rs7883515       T       C       .       PASS    AA=C;DP=86      GT:GQ:DP        0|0:42:14       1|1:40:15       0|1:100:17
+X      72488173        rs2522817       G       C       .       PASS    AA=.;DP=99      GT:GQ:DP        0|0:42:14       1|1:47:24       0|1:100:40
+14     24838481        rs8018285       G       A       .       PASS    AA=G;DP=112     GT:GQ:DP        0|0:42:14       1|1:52:22       0|1:100:62
+13     97256098        rs9517081       G       C       .       PASS    AA=C;DP=76      GT:GQ:DP        0|0:42:14       1|1:55:20       0|1:100:44
+6      98618289        rs7452685       C       T       .       PASS    AA=C;DP=93      GT:GQ:DP        0|0:42:14       1|1:55:20       0|1:100:56
+1      236464394       rs10737822      G       A       .       PASS    AA=A;DP=105;HM2;HM3     GT:GQ:DP        0|0:42:14       1|1:58:21       0|1:100:30
+10     57826228        rs2260367       T       G       .       PASS    AA=T;DP=84      GT:GQ:DP        0|0:42:14       1|1:61:22       0|1:100:36
+4      173245510       .       T       C       .       PASS    AA=C;DP=70      GT:GQ:DP        0|0:42:14       1|1:61:23       0|1:100:21
+X      138161835       rs2097346       C       A       .       PASS    AA=C;DP=113     GT:GQ:DP        0|0:42:14       1|1:64:23       0|1:100:37
+X      146318044       .       C       A       .       PASS    AA=C;DP=62      GT:GQ:DP        0|0:42:14       1|1:7:8 0|1:100:19
+4      44408602        rs60812677      T       C       .       PASS    AA=N;DP=69      GT:GQ:DP        0|0:42:15       1|1:16:9        0|1:100:33
+14     54252157        rs1957364       G       A       .       PASS    AA=A;DP=89      GT:GQ:DP        0|0:42:15       1|1:46:17       0|1:100:57
+2      178719412       rs334074        G       A       .       PASS    AA=A;DP=79      GT:GQ:DP        0|0:42:15       1|1:49:18       0|1:100:46
+21     21825880        rs2826879       A       G       .       PASS    AA=A;DP=108     GT:GQ:DP        0|0:42:15       1|1:52:20       0|1:100:70
+X      8270005 rs17335630      G       A       .       PASS    AA=g;DP=122     GT:GQ:DP        0|0:42:15       1|1:67:27       0|1:100:34
+18     25510407        .       T       A       .       PASS    AA=t;DP=82      GT:GQ:DP        0|0:42:17       1|1:35:18       0|1:100:33
+9      22355772        rs12004669      G       T       .       PASS    AA=g;DP=113     GT:GQ:DP        0|0:42:18       0|1:100:27      0|0:100:72
+4      78747175        rs57149021      C       T       .       PASS    AA=T;DP=114     GT:GQ:DP        0|0:42:19       1|0:100:21      0|1:100:76
+11     26729772        rs59585463      T       C       .       PASS    AA=T;DP=117     GT:GQ:DP        0|0:42:19       1|0:100:21      0|1:100:77
+4      31952275        .       G       T       .       PASS    AA=G;DP=123     GT:GQ:DP        0|0:42:20       1|0:100:25      0|1:100:76
+1      157964435       .       A       T       .       PASS    AA=A;DP=103     GT:GQ:DP        0|0:42:21       1|0:100:23      0|1:100:59
+10     43516845        .       A       C       .       PASS    AA=N;DP=97      GT:GQ:DP        0|0:42:23       1|0:98:15       0|1:100:60
+3      20710637        rs6792413       C       T       .       PASS    AA=C;DP=88      GT:GQ:DP        0|0:42:24       1|0:56:14       0|1:100:52
+6      116867034       rs9488929       A       G       .       PASS    AA=A;DP=117     GT:GQ:DP        0|0:42:24       1|0:66:26       0|1:100:65
+5      114494044       rs6866580       C       T       .       PASS    AA=C;DP=92      GT:GQ:DP        0|0:42:24       1|1:22:9        0|1:100:58
+8      71612613        rs12542675      C       A       .       PASS    AA=A;DP=116     GT:GQ:DP        0|0:42:29       1|1:51:28       0|1:100:60
+4      191143911       .       A       C       .       PASS    AA=.;DP=163     GT:GQ:DP        0|0:42:33       1|0:72:35       0|1:89:96
+5      65869596        rs12186448      G       A       .       PASS    AA=G;DP=116     GT:GQ:DP        0|0:43:14       1|0:51:16       0|1:100:86
+10     125770749       rs4072194       G       A       .       PASS    AA=-;DP=56      GT:GQ:DP        0|0:43:15       1|0:39:6        0|1:100:28
+11     88834522        rs56075294      C       G       .       PASS    AA=G;DP=85      GT:GQ:DP        0|0:43:17       1|0:44:12       0|1:100:55
+4      67935269        rs13103397      G       A       .       PASS    AA=A;DP=102     GT:GQ:DP        0|0:43:18       0|1:100:23      0|0:100:65
+17     61829908        .       G       C       .       PASS    AA=G;DP=124     GT:GQ:DP        0|0:43:19       0|1:100:18      0|0:100:41
+18     68635857        rs17727260      C       T       .       PASS    AA=C;DP=112     GT:GQ:DP        0|0:43:19       1|0:100:26      0|1:100:67
+1      236294917       rs1340462       T       G       .       PASS    AA=G;DP=101;HM2 GT:GQ:DP        0|0:43:20       0|1:100:18      0|0:100:63
+8      132816590       .       C       T       .       PASS    AA=C;DP=103     GT:GQ:DP        0|0:43:20       0|1:100:19      0|0:100:64
+11     80872115        rs12274986      C       A       .       PASS    AA=C;DP=125     GT:GQ:DP        0|0:43:20       0|1:100:28      0|0:100:78
+8      58292103        rs7817188       C       T       .       PASS    AA=c;DP=102     GT:GQ:DP        0|0:43:20       1|0:28:15       0|1:100:67
+4      65245896        rs6840623       C       T       .       PASS    AA=c;DP=94      GT:GQ:DP        0|0:43:21       1|1:14:15       0|1:100:58
+1      186568594       rs7538400       C       T       .       PASS    AA=T;DP=110;HM2;HM3     GT:GQ:DP        0|0:43:21       1|1:37:16       0|1:100:75
+11     91494476        rs11019822      G       T       .       PASS    AA=G;DP=108     GT:GQ:DP        0|0:43:22       1|0:100:18      0|1:100:66
+3      73992542        rs62248427      G       T       .       PASS    AA=G;DP=119     GT:GQ:DP        0|0:43:23       1|0:100:19      0|1:100:78
+10     97758505        rs61869172      T       C       .       PASS    AA=t;DP=90      GT:GQ:DP        0|0:43:23       1|1:4:10        0|1:100:57
+5      102489228       .       C       T       .       PASS    AA=C;DP=127     GT:GQ:DP        0|0:43:24       0|1:100:14      0|0:100:36
+3      191754084       rs2080795       C       G       .       PASS    AA=G;DP=91      GT:GQ:DP        0|0:43:24       0|1:100:16      0|0:100:42
+8      3252679 .       C       T       .       PASS    AA=C;DP=105     GT:GQ:DP        0|0:43:24       0|1:100:17      0|0:100:63
+14     65864348        .       G       A       .       PASS    AA=G;DP=97      GT:GQ:DP        0|0:43:24       0|1:100:18      0|0:100:58
+10     30888663        rs10763799      C       A       .       PASS    AA=A;DP=117     GT:GQ:DP        0|0:43:24       0|1:100:19      0|0:100:73
+4      14306857        .       T       C       .       PASS    AA=T;DP=108     GT:GQ:DP        0|0:43:24       0|1:100:23      0|0:100:62
+9      137329023       rs11103802      T       A       .       PASS    AA=T;DP=125     GT:GQ:DP        0|0:43:24       0|1:100:23      0|0:100:79
+4      25600658        .       T       C       .       PASS    AA=T;DP=121     GT:GQ:DP        0|0:43:24       1|1:40:15       0|1:100:83
+11     22449030        rs17762 G       A       .       PASS    AA=A;DP=116     GT:GQ:DP        0|0:43:24       1|1:82:30       0|1:100:60
+4      63089476        rs2345929       C       A       .       PASS    AA=C;DP=94      GT:GQ:DP        0|0:43:24       1|1:9:12        0|1:100:59
+8      85292959        rs1978828       A       C       .       PASS    AA=C;DP=84      GT:GQ:DP        0|0:43:25       1|0:100:15      0|1:100:43
+4      36608278        rs10019844      A       C       .       PASS    AA=A;DP=84      GT:GQ:DP        0|0:43:25       1|0:100:18      0|1:100:42
+2      150174250       rs62190651      T       G       .       PASS    AA=G;DP=97      GT:GQ:DP        0|0:43:25       1|0:100:18      0|1:100:43
+9      128044562       rs59588272      C       T       .       PASS    AA=C;DP=94      GT:GQ:DP        0|0:43:25       1|0:100:18      0|1:100:49
+9      84634595        rs12115271      A       T       .       PASS    AA=A;DP=121     GT:GQ:DP        0|0:43:25       1|0:100:18      0|1:100:77
+3      5796323 rs2437205       G       C       .       PASS    AA=G;DP=120     GT:GQ:DP        0|0:43:25       1|0:100:20      0|1:100:75
+10     83930628        .       A       G       .       PASS    AA=A;DP=125     GT:GQ:DP        0|0:43:25       1|0:100:29      0|1:100:74
+6      141214459       .       C       A       .       PASS    AA=C;DP=97      GT:GQ:DP        0|0:43:25       1|0:70:10       0|1:100:63
+10     56574874        rs4935580       C       T       .       PASS    AA=c;DP=81      GT:GQ:DP        0|0:43:25       1|0:73:14       0|1:100:43
+6      67525508        rs59708886      A       T       .       PASS    AA=A;DP=106     GT:GQ:DP        0|0:43:25       1|0:83:18       0|1:100:65
+18     5247386 .       C       A       .       PASS    AA=C;DP=102     GT:GQ:DP        0|0:43:25       1|0:87:19       0|1:100:54
+1      91930396        rs7549755       T       C       .       PASS    AA=T;DP=145;HM2;HM3     GT:GQ:DP        0|0:43:25       1|0:95:28       0|1:100:48
+7      131683899       .       T       C       .       PASS    AA=T;DP=115     GT:GQ:DP        0|0:43:33       1|0:27:13       0|1:100:66
+18     18485774        .       A       T       .       PASS    AA=A;DP=80      GT:GQ:DP        0|0:44:13       0|1:100:12      0|0:100:56
+13     22122008        rs4769218       G       T       .       PASS    AA=G;DP=77      GT:GQ:DP        0|0:44:13       0|1:100:13      0|0:100:50
+13     50481745        rs60194361      A       G       .       PASS    AA=A;DP=87      GT:GQ:DP        0|0:44:13       0|1:100:14      0|0:100:60
+6      55104540        rs4275060       G       A       .       PASS    AA=G;DP=82      GT:GQ:DP        0|0:44:13       0|1:100:15      0|0:100:52
+1      194002813       rs12030830      T       C       .       PASS    AA=T;DP=90      GT:GQ:DP        0|0:44:13       0|1:100:15      0|0:100:62
+4      116885103       .       C       G       .       PASS    AA=C;DP=77      GT:GQ:DP        0|0:44:13       0|1:100:16      0|0:100:45
+8      535813  .       A       G       .       PASS    AA=a;DP=102     GT:GQ:DP        0|0:44:13       0|1:100:16      0|0:100:76
+11     10341953        rs2957655       A       G       .       PASS    AA=G;DP=102     GT:GQ:DP        0|0:44:13       0|1:100:16      0|0:90:30
+X      92585978        rs6522666       A       G       .       PASS    AA=A;DP=92      GT:GQ:DP        0|0:44:13       0|1:100:18      0|0:63:21
+18     61017296        rs552325        T       C       .       PASS    AA=T;DP=94      GT:GQ:DP        0|0:44:13       0|1:100:19      0|0:100:58
+13     62628489        rs471109        C       T       .       PASS    AA=C;DP=95      GT:GQ:DP        0|0:44:13       0|1:100:19      0|0:100:61
+5      22447666        .       C       T       .       PASS    AA=C;DP=79      GT:GQ:DP        0|0:44:13       0|1:100:20      0|0:100:46
+15     30974384        rs62001356      A       G       .       PASS    AA=G;DP=83      GT:GQ:DP        0|0:44:13       0|1:100:22      0|0:100:48
+4      137935267       .       T       G       .       PASS    AA=T;DP=80      GT:GQ:DP        0|0:44:13       0|1:100:23      0|0:100:42
+1      227784144       rs6587344       T       C       .       PASS    AA=T;DP=93;HM2  GT:GQ:DP        0|0:44:13       0|1:100:24      0|0:100:56
+X      92888659        rs12558137      T       A       .       PASS    AA=T;DP=122     GT:GQ:DP        0|0:44:13       0|1:100:24      0|0:90:30
+5      51760385        rs10050378      G       A       .       PASS    AA=A;DP=77      GT:GQ:DP        0|0:44:13       0|1:100:25      0|0:100:40
+2      141186950       rs13010697      C       A       .       PASS    AA=A;DP=109     GT:GQ:DP        0|0:44:13       0|1:100:25      0|0:100:72
+22     21413231        rs6003271       A       G       .       PASS    AA=A;DP=93      GT:GQ:DP        0|0:44:13       0|1:100:26      0|0:100:54
+X      84998186        .       A       G       .       PASS    AA=G;DP=121     GT:GQ:DP        0|0:44:13       0|1:100:27      0|0:100:39
+X      5921654 .       C       T       .       PASS    AA=C;DP=108     GT:GQ:DP        0|0:44:13       0|1:100:27      0|0:100:44
+X      39698826        .       A       T       .       PASS    AA=T;DP=120     GT:GQ:DP        0|0:44:13       0|1:100:28      0|0:100:43
+X      34883154        rs6628921       G       T       .       PASS    AA=G;DP=87      GT:GQ:DP        0|0:44:13       0|1:100:28      0|0:75:25
+X      38617317        rs61598772      C       A       .       PASS    AA=C;DP=114     GT:GQ:DP        0|0:44:13       0|1:100:29      0|0:100:38
+X      115211846       .       A       G       .       PASS    AA=A;DP=118     GT:GQ:DP        0|0:44:13       0|1:100:29      0|0:100:42
+X      17032178        rs16980537      A       G       .       PASS    AA=A;DP=121     GT:GQ:DP        0|0:44:13       0|1:100:32      0|0:100:41
+X      23558590        .       A       G       .       PASS    AA=G;DP=114     GT:GQ:DP        0|0:44:13       0|1:100:34      0|0:100:34
+X      139111593       .       A       G       .       PASS    AA=G;DP=126     GT:GQ:DP        0|0:44:13       0|1:100:36      0|0:100:42
+5      180564103       rs412564        C       G       .       PASS    AA=c;DP=68      GT:GQ:DP        0|0:44:13       0|1:100:8       0|0:100:47
+10     58914755        .       G       A       .       PASS    AA=G;DP=88      GT:GQ:DP        0|0:44:14       0|1:100:11      0|0:100:63
+8      83438284        .       A       G       .       PASS    AA=N;DP=93      GT:GQ:DP        0|0:44:14       0|1:100:11      0|0:100:67
+X      131383395       rs17000240      C       T       .       PASS    AA=C;DP=97      GT:GQ:DP        0|0:44:14       0|1:100:12      0|0:75:27
+3      168921551       .       A       G       .       PASS    AA=T;DP=73      GT:GQ:DP        0|0:44:14       0|1:100:15      0|0:100:44
+3      117345125       rs1920367       T       C       .       PASS    AA=T;DP=63      GT:GQ:DP        0|0:44:14       0|1:100:15      0|0:75:25
+7      80574249        .       G       A       .       PASS    AA=A;DP=68      GT:GQ:DP        0|0:44:14       0|1:100:17      0|0:100:38
+5      132041608       rs2243265       C       A       .       PASS    AA=C;DP=106     GT:GQ:DP        0|0:44:14       0|1:100:17      0|0:100:74
+4      187615832       rs62348873      G       T       .       PASS    AA=T;DP=87      GT:GQ:DP        0|0:44:14       0|1:100:19      0|0:100:55
+X      42487080        rs12845210      T       C       .       PASS    AA=C;DP=95      GT:GQ:DP        0|0:44:14       0|1:100:21      0|0:87:29
+13     34349214        .       C       T       .       PASS    AA=C;DP=94      GT:GQ:DP        0|0:44:14       0|1:100:22      0|0:100:58
+X      84106488        .       T       G       .       PASS    AA=T;DP=117     GT:GQ:DP        0|0:44:14       0|1:100:24      0|0:100:41
+X      17528811        .       C       T       .       PASS    AA=T;DP=90      GT:GQ:DP        0|0:44:14       0|1:100:25      0|0:100:35
+X      120387448       .       T       C       .       PASS    AA=T;DP=126     GT:GQ:DP        0|0:44:14       0|1:100:25      0|0:100:46
+10     67623427        rs4745888       T       C       .       PASS    AA=t;DP=97      GT:GQ:DP        0|0:44:14       0|1:100:25      0|0:100:48
+X      30543370        rs6628536       C       T       .       PASS    AA=C;DP=112     GT:GQ:DP        0|0:44:14       0|1:100:27      0|0:100:38
+2      179050694       .       C       A       .       PASS    AA=C;DP=72      GT:GQ:DP        0|0:44:14       1|0:100:14      0|1:100:42
+3      79082795        rs9868575       A       T       .       PASS    AA=A;DP=84      GT:GQ:DP        0|0:44:14       1|0:100:14      0|1:100:53
+4      47605451        .       C       T       .       PASS    AA=c;DP=57      GT:GQ:DP        0|0:44:14       1|0:100:14      0|1:90:21
+8      84266717        rs9969462       A       G       .       PASS    AA=A;DP=71      GT:GQ:DP        0|0:44:14       1|0:100:16      0|1:100:31
+4      162789579       rs62330766      T       A       .       PASS    AA=T;DP=89      GT:GQ:DP        0|0:44:14       1|0:100:16      0|1:100:60
+8      119971209       .       G       A       .       PASS    AA=G;DP=94      GT:GQ:DP        0|0:44:14       1|0:100:16      0|1:100:63
+6      69287920        rs13219660      T       C       .       PASS    AA=T;DP=77      GT:GQ:DP        0|0:44:14       1|0:100:17      0|1:100:35
+X      131955453       rs5977797       C       T       .       PASS    AA=c;DP=90      GT:GQ:DP        0|0:44:14       1|0:100:17      0|1:100:37
+X      112558802       .       G       A       .       PASS    AA=A;DP=120     GT:GQ:DP        0|0:44:14       1|0:100:17      0|1:100:54
+4      47045710        rs13104400      T       A       .       PASS    AA=T;DP=119     GT:GQ:DP        0|0:44:14       1|0:100:17      0|1:100:77
+12     16771969        rs9971774       T       C       .       PASS    AA=T;DP=72      GT:GQ:DP        0|0:44:14       1|0:100:18      0|1:100:24
+X      105940310       rs5962756       T       C       .       PASS    AA=T;DP=98      GT:GQ:DP        0|0:44:14       1|0:100:18      0|1:100:27
+20     52860455        .       A       G       .       PASS    AA=A;DP=72      GT:GQ:DP        0|0:44:14       1|0:100:19      0|1:100:39
+X      7598762 rs12689185      C       T       .       PASS    AA=C;DP=93      GT:GQ:DP        0|0:44:14       1|0:100:20      0|1:100:29
+4      183578376       rs61491176      A       G       .       PASS    AA=A;DP=119     GT:GQ:DP        0|0:44:14       1|0:100:20      0|1:100:37
+14     69739768        .       T       C       .       PASS    AA=T;DP=91      GT:GQ:DP        0|0:44:14       1|0:100:20      0|1:100:54
+10     115902969       .       A       C       .       PASS    AA=A;DP=93      GT:GQ:DP        0|0:44:14       1|0:100:20      0|1:100:61
+7      8557137 rs6952423       T       C       .       PASS    AA=T;DP=80      GT:GQ:DP        0|0:44:14       1|0:100:21      0|1:100:33
+9      25512804        .       T       G       .       PASS    AA=T;DP=72      GT:GQ:DP        0|0:44:14       1|0:100:21      0|1:100:36
+4      131438120       rs1567373       G       A       .       PASS    AA=g;DP=85      GT:GQ:DP        0|0:44:14       1|0:100:21      0|1:100:49
+13     94354035        rs17458074      G       C       .       PASS    AA=G;DP=89      GT:GQ:DP        0|0:44:14       1|0:100:21      0|1:100:53
+X      50695812        rs56675572      T       G       .       PASS    AA=G;DP=76      GT:GQ:DP        0|0:44:14       1|0:100:22      0|1:100:21
+17     49484793        .       C       G       .       PASS    AA=C;DP=85      GT:GQ:DP        0|0:44:14       1|0:100:22      0|1:100:49
+9      78801313        rs13300948      C       T       .       PASS    AA=T;DP=85      GT:GQ:DP        0|0:44:14       1|0:100:22      0|1:100:49
+13     28650497        rs17072891      A       G       .       PASS    AA=A;DP=99      GT:GQ:DP        0|0:44:14       1|0:100:22      0|1:100:63
+8      52658618        .       A       C       .       PASS    AA=C;DP=115     GT:GQ:DP        0|0:44:14       1|0:100:22      0|1:100:75
+15     93068587        .       C       T       .       PASS    AA=c;DP=95      GT:GQ:DP        0|0:44:14       1|0:100:23      0|1:100:18
+X      42808753        rs5991567       T       G       .       PASS    AA=T;DP=97      GT:GQ:DP        0|0:44:14       1|0:100:23      0|1:100:34
+5      25144591        rs13189107      A       T       .       PASS    AA=A;DP=83      GT:GQ:DP        0|0:44:14       1|0:100:24      0|1:100:45
+5      50818061        .       A       G       .       PASS    AA=A;DP=89      GT:GQ:DP        0|0:44:14       1|0:100:26      0|1:100:50
+X      130281844       rs4240131       T       A       .       PASS    AA=T;DP=124     GT:GQ:DP        0|0:44:14       1|0:100:28      0|1:100:42
+5      100953089       rs13356914      A       G       .       PASS    AA=a;DP=90      GT:GQ:DP        0|0:44:14       1|0:100:28      0|1:100:46
+X      114141378       .       A       G       .       PASS    AA=A;DP=81      GT:GQ:DP        0|0:44:14       1|0:100:30      0|1:100:25
+X      109833163       .       C       G       .       PASS    AA=G;DP=110     GT:GQ:DP        0|0:44:14       1|0:100:30      0|1:100:30
+5      90590706        rs13362365      A       G       .       PASS    AA=A;DP=105     GT:GQ:DP        0|0:44:14       1|0:100:34      0|1:100:56
+4      42883282        rs12512400      C       T       .       PASS    AA=C;DP=88      GT:GQ:DP        0|0:44:14       1|0:16:15       0|1:100:59
+X      103154521       rs553509        C       T       .       PASS    AA=-;DP=76      GT:GQ:DP        0|0:44:14       1|0:44:11       0|1:100:36
+X      16758248        .       C       T       .       PASS    AA=C;DP=84      GT:GQ:DP        0|0:44:14       1|0:45:15       0|1:100:27
+10     103990663       .       G       A       .       PASS    AA=G;DP=69      GT:GQ:DP        0|0:44:14       1|0:49:8        0|1:100:44
+3      158436405       rs9289978       G       A       .       PASS    AA=G;DP=76      GT:GQ:DP        0|0:44:14       1|0:57:11       0|1:100:51
+8      5613499 rs12542953      C       T       .       PASS    AA=C;DP=76      GT:GQ:DP        0|0:44:14       1|0:61:9        0|1:100:50
+8      84429545        .       A       C       .       PASS    AA=C;DP=74      GT:GQ:DP        0|0:44:14       1|0:62:17       0|1:100:38
+6      82082144        rs6902070       C       G       .       PASS    AA=C;DP=66      GT:GQ:DP        0|0:44:14       1|0:63:12       0|1:100:40
+13     65458837        .       T       G       .       PASS    AA=T;DP=67      GT:GQ:DP        0|0:44:14       1|0:70:13       0|1:100:41
+X      111288914       rs5942770       C       G       .       PASS    AA=c;DP=80      GT:GQ:DP        0|0:44:14       1|0:72:17       0|1:100:39
+4      4434424 rs6838123       T       A       .       PASS    AA=T;DP=79      GT:GQ:DP        0|0:44:14       1|0:74:14       0|1:100:51
+3      179885437       .       G       T       .       PASS    AA=T;DP=93      GT:GQ:DP        0|0:44:14       1|0:75:19       0|1:100:60
+X      85468510        rs7876439       T       A       .       PASS    AA=A;DP=103     GT:GQ:DP        0|0:44:14       1|0:76:26       0|1:100:34
+8      74953840        rs3808620       G       C       .       PASS    AA=G;DP=80      GT:GQ:DP        0|0:44:14       1|0:79:12       0|1:100:57
+10     107582289       rs7912632       T       A       .       PASS    AA=A;DP=101     GT:GQ:DP        0|0:44:14       1|0:81:15       0|1:100:72
+20     58779445        rs1202071       G       A       .       PASS    AA=G;DP=100     GT:GQ:DP        0|0:44:14       1|0:83:23       0|1:100:63
+X      109934857       rs12012769      A       C       .       PASS    AA=C;DP=111     GT:GQ:DP        0|0:44:14       1|0:84:23       0|1:100:50
+8      112923790       rs12679331      C       A       .       PASS    AA=C;DP=74      GT:GQ:DP        0|0:44:14       1|0:85:16       0|1:100:43
+4      162887660       .       G       T       .       PASS    AA=g;DP=91      GT:GQ:DP        0|0:44:14       1|0:86:15       0|1:100:63
+4      165131754       rs58609595      A       G       .       PASS    AA=A;DP=89      GT:GQ:DP        0|0:44:14       1|0:88:16       0|1:100:56
+X      149749844       rs16995749      C       A       .       PASS    AA=A;DP=85      GT:GQ:DP        0|0:44:14       1|0:88:22       0|1:100:32
+12     58597215        rs4469929       T       G       .       PASS    AA=T;DP=97      GT:GQ:DP        0|0:44:14       1|0:94:19       0|1:100:63
+X      31717337        rs5927041       G       A       .       PASS    AA=A;DP=76      GT:GQ:DP        0|0:44:14       1|0:97:16       0|1:100:24
+15     70186221        rs10083583      T       C       .       PASS    AA=T;DP=98      GT:GQ:DP        0|0:44:14       1|0:97:16       0|1:100:54
+6      950576  rs35535616      G       A       .       PASS    AA=G;DP=65      GT:GQ:DP        0|0:44:14       1|0:99:17       0|1:100:31
+21     30958689        .       G       A       .       PASS    AA=G;DP=108     GT:GQ:DP        0|0:44:15       0|1:100:21      0|0:100:71
+2      238397407       .       A       G       .       PASS    AA=A;DP=90      GT:GQ:DP        0|0:44:15       1|0:100:17      0|1:100:60
+X      86857116        rs6652470       A       G       .       PASS    AA=A;DP=82      GT:GQ:DP        0|0:44:15       1|0:100:18      0|1:100:25
+X      37036115        .       C       T       .       PASS    AA=C;DP=99      GT:GQ:DP        0|0:44:15       1|0:100:23      0|1:100:35
+8      99355910        .       A       G       .       PASS    AA=A;DP=97      GT:GQ:DP        0|0:44:15       1|0:100:25      0|1:100:58
+18     40296312        rs60088897      G       A       .       PASS    AA=G;DP=77      GT:GQ:DP        0|0:44:15       1|0:43:20       0|1:100:29
+11     125658531       .       C       G       .       PASS    AA=C;DP=68      GT:GQ:DP        0|0:44:15       1|0:50:11       0|1:65:29
+6      132641063       rs7739798       A       C       .       PASS    AA=C;DP=68      GT:GQ:DP        0|0:44:15       1|0:56:8        0|1:91:45
+12     129868560       .       G       C       .       PASS    AA=G;DP=62      GT:GQ:DP        0|0:44:15       1|0:63:12       0|1:70:26
+X      100941998       rs5944927       T       A       .       PASS    AA=t;DP=82      GT:GQ:DP        0|0:44:15       1|0:73:12       0|1:100:36
+4      86757093        .       G       A       .       PASS    AA=G;DP=80      GT:GQ:DP        0|0:44:15       1|0:78:8        0|1:100:58
+5      105853086       .       A       G       .       PASS    AA=A;DP=70      GT:GQ:DP        0|0:44:15       1|0:85:16       0|1:100:26
+18     1381062 .       T       G       .       PASS    AA=T;DP=71      GT:GQ:DP        0|0:44:15       1|0:87:21       0|1:100:23
+12     57851055        rs10877223      G       C       .       PASS    AA=C;DP=100     GT:GQ:DP        0|0:44:16       1|0:100:23      0|1:100:62
+X      141673738       rs6636831       A       T       .       PASS    AA=A;DP=91      GT:GQ:DP        0|0:44:16       1|0:100:26      0|1:100:29
+3      80041658        rs9857641       A       G       .       PASS    AA=G;DP=85      GT:GQ:DP        0|0:44:16       1|0:50:9        0|1:100:60
+8      137498117       .       C       T       .       PASS    AA=C;DP=103     GT:GQ:DP        0|0:44:20       1|0:100:13      0|1:100:70
+9      104429861       rs1157762       G       A       .       PASS    AA=G;DP=86      GT:GQ:DP        0|0:44:20       1|0:100:21      0|1:100:45
+2      11187502        rs10166997      C       G       .       PASS    AA=G;DP=68      GT:GQ:DP        0|0:44:20       1|0:53:7        0|1:100:33
+4      67994996        rs7668339       A       G       .       PASS    AA=G;DP=111     GT:GQ:DP        0|0:44:20       1|1:40:16       0|1:100:75
+9      109621563       .       G       T       .       PASS    AA=G;DP=114     GT:GQ:DP        0|0:44:21       1|0:96:24       0|1:100:69
+2      34404330        rs2043457       C       A       .       PASS    AA=A;DP=94      GT:GQ:DP        0|0:44:21       1|1:61:22       0|1:100:39
+1      5823501 .       C       T       .       PASS    AA=C;DP=121     GT:GQ:DP        0|0:44:22       1|0:100:18      0|1:100:42
+9      121780777       .       T       G       .       PASS    AA=T;DP=136     GT:GQ:DP        0|0:44:23       0|1:100:22      0|0:100:90
+3      106627673       .       G       T       .       PASS    AA=G;DP=107     GT:GQ:DP        0|0:44:25       0|1:100:24      0|0:100:58
+3      74873680        rs6549652       C       A       .       PASS    AA=A;DP=122     GT:GQ:DP        0|0:44:25       0|1:100:27      0|0:100:66
+18     54288606        rs35173870      C       A       .       PASS    AA=C;DP=146     GT:GQ:DP        0|0:44:25       1|0:100:31      0|1:100:88
+2      209391398       .       A       C       .       PASS    AA=A;DP=111     GT:GQ:DP        0|0:44:26       1|0:45:8        0|1:100:32
+1      7721489 rs2071988       A       G       .       PASS    AA=G;DP=132     GT:GQ:DP        0|0:44:26       1|1:100:36      0|1:100:71
+2      47338382        rs6738753       T       A       .       PASS    AA=t;DP=106     GT:GQ:DP        0|0:44:26       1|1:31:23       0|1:100:41
+9      82513970        rs12349597      G       T       .       PASS    AA=G;DP=104     GT:GQ:DP        0|0:44:26       1|1:37:14       0|1:100:59
+2      36156395        rs12475297      G       A       .       PASS    AA=G;DP=119     GT:GQ:DP        0|0:44:26       1|1:58:21       0|1:100:70
+13     53012756        .       C       T       .       PASS    AA=C;DP=127     GT:GQ:DP        0|0:44:26       1|1:88:33       0|1:100:67
+X      69171362        rs5936825       G       A       .       PASS    AA=A;DP=90      GT:GQ:DP        0|0:45:15       1|1:11:10       0|1:100:41
+6      169719344       rs16888175      C       T       .       PASS    AA=C;DP=52      GT:GQ:DP        0|0:45:15       1|1:11:8        0|1:95:22
+4      103109569       .       A       G       .       PASS    AA=A;DP=88      GT:GQ:DP        0|0:45:15       1|1:28:11       0|1:100:47
+5      30509476        .       C       T       .       PASS    AA=c;DP=72      GT:GQ:DP        0|0:45:15       1|1:31:23       0|1:100:26
+13     64181967        rs359335        A       C       .       PASS    AA=a;DP=105     GT:GQ:DP        0|0:45:15       1|1:37:14       0|1:100:25
+8      63020141        .       T       A       .       PASS    AA=T;DP=70      GT:GQ:DP        0|0:45:15       1|1:37:14       0|1:100:30
+4      60742217        rs13123221      T       C       .       PASS    AA=T;DP=80      GT:GQ:DP        0|0:45:15       1|1:37:14       0|1:100:48
+1      57652873        .       G       A       .       PASS    AA=G;DP=71      GT:GQ:DP        0|0:45:15       1|1:37:15       0|1:100:42
+4      104719803       rs62340623      T       C       .       PASS    AA=C;DP=59      GT:GQ:DP        0|0:45:15       1|1:40:15       0|1:100:18
+1      166813229       rs17513631      T       A       .       PASS    AA=A;DP=82;HM2  GT:GQ:DP        0|0:45:15       1|1:40:15       0|1:100:52
+9      8245734 rs10758946      G       C       .       PASS    AA=C;DP=99      GT:GQ:DP        0|0:45:15       1|1:40:17       0|1:100:68
+3      146326578       .       G       T       .       PASS    AA=g;DP=90      GT:GQ:DP        0|0:45:15       1|1:42:27       0|1:100:46
+18     6729338 rs9960790       T       A       .       PASS    AA=T;DP=72      GT:GQ:DP        0|0:45:15       1|1:43:17       0|1:100:40
+X      117217860       rs61568340      T       C       .       PASS    AA=t;DP=105     GT:GQ:DP        0|0:45:15       1|1:48:29       0|1:100:31
+2      190906972       rs291430        A       C       .       PASS    AA=A;DP=100     GT:GQ:DP        0|0:45:15       1|1:50:30       0|1:100:54
+X      3240034 rs12848814      A       T       .       PASS    AA=N;DP=103     GT:GQ:DP        0|0:45:15       1|1:52:19       0|1:100:37
+6      66501813        rs13217915      G       C       .       PASS    AA=G;DP=80      GT:GQ:DP        0|0:45:15       1|1:52:20       0|1:100:46
+2      14718200        rs765786        C       A       .       PASS    AA=N;DP=102     GT:GQ:DP        0|0:45:15       1|1:58:21       0|1:100:66
+X      120265936       rs6649137       A       G       .       PASS    AA=A;DP=95      GT:GQ:DP        0|0:45:15       1|1:58:23       0|1:100:24
+X      50532433        rs7054248       A       T       .       PASS    AA=A;DP=117     GT:GQ:DP        0|0:45:15       1|1:83:31       0|1:100:41
+1      195455287       rs518149        A       G       .       PASS    AA=G;DP=126;HM2 GT:GQ:DP        0|0:45:15       1|1:94:33       0|1:100:77
+3      191503315       rs4234616       T       C       .       PASS    AA=t;DP=75      GT:GQ:DP        0|0:45:16       1|1:22:10       0|1:100:51
+8      77052801        rs17322675      C       T       .       PASS    AA=C;DP=83      GT:GQ:DP        0|0:45:16       1|1:24:19       0|1:100:45
+X      37179772        rs5963073       C       G       .       PASS    AA=G;DP=94      GT:GQ:DP        0|0:45:16       1|1:25:11       0|1:100:30
+13     56402287        rs9597467       A       G       .       PASS    AA=A;DP=90      GT:GQ:DP        0|0:45:16       1|1:49:18       0|1:100:55
+9      34581665        rs28678127      G       A       .       PASS    AA=G;DP=66      GT:GQ:DP        0|0:45:16       1|1:6:8 0|1:100:34
+21     14764167        rs2822675       A       G       .       PASS    AA=A;DP=132     GT:GQ:DP        0|0:45:16       1|1:73:27       0|1:100:71
+3      159764825       rs9834736       T       C       .       PASS    AA=T;DP=92      GT:GQ:DP        0|0:45:17       1|1:49:18       0|1:100:54
+4      71247824        .       T       C       .       PASS    AA=T;DP=105     GT:GQ:DP        0|0:45:18       0|1:100:17      0|0:100:68
+1      69793286        .       A       G       .       PASS    AA=A;DP=74      GT:GQ:DP        0|0:45:18       1|0:70:18       0|1:100:36
+2      11129366        .       T       G       .       PASS    AA=T;DP=117     GT:GQ:DP        0|0:45:20       0|1:100:20      0|0:100:78
+13     38093635        rs2246344       G       T       .       PASS    AA=T;DP=86      GT:GQ:DP        0|0:45:20       1|0:100:21      0|1:100:45
+2      58697067        .       A       G       .       PASS    AA=A;DP=73      GT:GQ:DP        0|0:45:21       1|0:65:12       0|1:100:40
+21     13741141        rs56695033      C       T       .       PASS    AA=C;DP=87      GT:GQ:DP        0|0:45:21       1|0:69:14       0|1:100:50
+8      70236317        rs57428962      A       C       .       PASS    AA=C;DP=124     GT:GQ:DP        0|0:45:22       1|0:100:31      0|1:100:74
+13     56302358        rs12869157      A       G       .       PASS    AA=A;DP=91      GT:GQ:DP        0|0:45:22       1|1:46:17       0|1:100:52
+6      41269377        rs59082703      T       C       .       PASS    AA=T;DP=131     GT:GQ:DP        0|0:45:22       1|1:61:22       0|1:100:38
+1      232328846       .       A       G       .       PASS    AA=G;DP=106     GT:GQ:DP        0|0:45:23       1|1:43:16       0|1:100:66
+7      34577554        rs10277271      T       C       .       PASS    AA=T;DP=119     GT:GQ:DP        0|0:45:24       1|0:100:26      0|1:100:70
+13     111617025       rs56771863      T       C       .       PASS    AA=C;DP=107     GT:GQ:DP        0|0:45:24       1|0:68:23       0|1:100:48
+17     77219203        .       G       T       .       PASS    AA=G;DP=110     GT:GQ:DP        0|0:45:26       1|0:100:25      0|1:100:59
+9      460461  rs60435945      A       C       .       PASS    AA=A;DP=136     GT:GQ:DP        0|0:45:27       1|0:93:15       0|1:100:50
+11     43687171        .       C       G       .       PASS    AA=C;DP=128     GT:GQ:DP        0|0:46:17       0|1:100:16      0|0:100:51
+4      98312842        rs28483243      C       T       .       PASS    AA=c;DP=84      GT:GQ:DP        0|0:46:20       0|1:100:11      0|0:100:50
+13     70717884        .       G       A       .       PASS    AA=G;DP=119     GT:GQ:DP        0|0:46:20       1|0:100:23      0|1:100:73
+7      19273733        rs10276385      G       T       .       PASS    AA=G;DP=86      GT:GQ:DP        0|0:46:21       1|0:100:19      0|1:100:46
+13     82341533        rs2046673       A       G       .       PASS    AA=A;DP=113     GT:GQ:DP        0|0:46:21       1|0:100:26      0|1:100:69
+19     54798870        .       A       T       .       PASS    AA=A;DP=95      GT:GQ:DP        0|0:46:21       1|0:98:18       0|1:100:56
+5      103963671       rs2974104       C       A       .       PASS    AA=C;DP=102     GT:GQ:DP        0|0:46:22       1|0:46:16       0|1:100:63
+4      127143143       rs7685739       A       G       .       PASS    AA=A;DP=95      GT:GQ:DP        0|0:46:22       1|0:46:19       0|1:100:51
+6      68886677        rs13201835      G       A       .       PASS    AA=G;DP=82      GT:GQ:DP        0|0:46:23       0|1:100:14      0|0:100:44
+12     40546753        rs10880179      T       C       .       PASS    AA=C;DP=113     GT:GQ:DP        0|0:46:24       1|1:58:21       0|1:100:67
+12     25713579        rs1397605       G       A       .       PASS    AA=G;DP=87      GT:GQ:DP        0|0:46:25       0|1:100:15      0|0:100:47
+5      595196  rs2458808       T       C       .       PASS    AA=T;DP=121     GT:GQ:DP        0|0:46:25       0|1:100:18      0|0:100:75
+12     64791548        .       A       G       .       PASS    AA=A;DP=115     GT:GQ:DP        0|0:46:25       0|1:100:19      0|0:100:68
+3      166647829       rs4303888       T       C       .       PASS    AA=T;DP=107     GT:GQ:DP        0|0:46:25       0|1:100:20      0|0:100:63
+11     103258383       .       C       G       .       PASS    AA=C;DP=115     GT:GQ:DP        0|0:46:25       0|1:100:21      0|0:100:69
+5      111367346       rs26562 C       T       .       PASS    AA=C;DP=128     GT:GQ:DP        0|0:46:25       0|1:100:22      0|0:100:37
+15     97437019        .       T       A       .       PASS    AA=T;DP=122     GT:GQ:DP        0|0:46:25       0|1:100:22      0|0:100:77
+10     120383819       .       C       T       .       PASS    AA=C;DP=160     GT:GQ:DP        0|0:46:25       0|1:100:32      0|0:100:104
+10     63644235        rs10995090      T       G       .       PASS    AA=T;DP=128     GT:GQ:DP        0|0:46:25       0|1:100:38      0|0:100:63
+5      40096789        .       G       A       .       PASS    AA=G;DP=108     GT:GQ:DP        0|0:46:26       1|0:100:19      0|1:100:69
+5      65757640        rs10075679      T       C       .       PASS    AA=C;DP=115     GT:GQ:DP        0|0:46:26       1|0:100:19      0|1:100:72
+8      40642439        rs2044895       T       C       .       PASS    AA=C;DP=98      GT:GQ:DP        0|0:46:26       1|0:100:22      0|1:100:50
+8      4275699 rs4875344       C       A       .       PASS    AA=A;DP=103     GT:GQ:DP        0|0:46:26       1|0:100:22      0|1:100:55
+2      965927  rs5020134       T       C       .       PASS    AA=T;DP=116     GT:GQ:DP        0|0:46:26       1|0:100:22      0|1:100:69
+8      106141120       .       C       A       .       PASS    AA=C;DP=94      GT:GQ:DP        0|0:46:26       1|0:100:23      0|1:100:45
+8      59705211        rs4421339       G       A       .       PASS    AA=G;DP=135     GT:GQ:DP        0|0:46:26       1|0:100:24      0|1:100:84
+8      26224408        rs17055109      G       A       .       PASS    AA=G;DP=113     GT:GQ:DP        0|0:46:26       1|0:100:25      0|1:100:62
+7      118692231       rs6952088       T       G       .       PASS    AA=G;DP=118     GT:GQ:DP        0|0:46:26       1|0:100:35      0|1:100:56
+3      174821006       .       G       A       .       PASS    AA=A;DP=95      GT:GQ:DP        0|0:46:26       1|0:21:16       0|1:100:58
+16     20936672        .       T       C       .       PASS    AA=T;DP=90      GT:GQ:DP        0|0:46:26       1|0:59:24       0|1:100:35
+20     55424552        rs6513296       C       T       .       PASS    AA=C;DP=101     GT:GQ:DP        0|0:46:26       1|0:75:19       0|1:100:52
+6      18852982        .       C       T       .       PASS    AA=c;DP=129     GT:GQ:DP        0|0:46:26       1|0:92:27       0|1:100:75
+4      20957414        rs59616856      G       T       .       PASS    AA=G;DP=116     GT:GQ:DP        0|0:46:26       1|0:94:17       0|1:100:73
+12     118580043       .       G       T       .       PASS    AA=G;DP=109     GT:GQ:DP        0|0:46:28       1|0:46:20       0|1:100:63
+12     50924206        rs58727616      G       C       .       PASS    AA=G;DP=130     GT:GQ:DP        0|0:46:28       1|0:95:20       0|1:100:82
+16     6777513 .       G       T       .       PASS    AA=T;DP=144     GT:GQ:DP        0|0:46:34       1|0:100:33      0|1:100:76
+3      155481950       .       A       C       .       PASS    AA=A;DP=88      GT:GQ:DP        0|0:47:14       0|1:100:10      0|0:100:58
+10     106526573       rs57910001      G       A       .       PASS    AA=G;DP=110     GT:GQ:DP        0|0:47:14       0|1:100:11      0|0:100:39
+5      161935726       .       C       T       .       PASS    AA=C;DP=74      GT:GQ:DP        0|0:47:14       0|1:100:11      0|0:100:50
+14     43822015        .       T       C       .       PASS    AA=T;DP=76      GT:GQ:DP        0|0:47:14       0|1:100:11      0|0:100:51
+X      130846767       rs5933019       C       T       .       PASS    AA=T;DP=90      GT:GQ:DP        0|0:47:14       0|1:100:12      0|0:99:33
+14     27734316        rs10150396      C       T       .       PASS    AA=C;DP=76      GT:GQ:DP        0|0:47:14       0|1:100:13      0|0:100:49
+X      110378521       rs17879776      G       A       .       PASS    AA=G;DP=91      GT:GQ:DP        0|0:47:14       0|1:100:13      0|0:85:33
+3      154939789       .       A       G       .       PASS    AA=A;DP=110     GT:GQ:DP        0|0:47:14       0|1:100:14      0|0:100:38
+16     61916742        rs12919347      A       C       .       PASS    AA=A;DP=85      GT:GQ:DP        0|0:47:14       0|1:100:14      0|0:100:53
+2      13090139        .       G       T       .       PASS    AA=g;DP=75      GT:GQ:DP        0|0:47:14       0|1:100:14      0|0:89:47
+6      130989044       rs6917425       T       G       .       PASS    AA=T;DP=72      GT:GQ:DP        0|0:47:14       0|1:100:15      0|0:100:45
+21     30818639        rs2154958       C       T       .       PASS    AA=C;DP=86      GT:GQ:DP        0|0:47:14       0|1:100:15      0|0:100:51
+7      103326655       rs17157141      T       C       .       PASS    AA=T;DP=90      GT:GQ:DP        0|0:47:14       0|1:100:15      0|0:100:59
+3      97947782        rs16835028      A       G       .       PASS    AA=A;DP=82      GT:GQ:DP        0|0:47:14       0|1:100:17      0|0:100:50
+8      5704912 .       T       C       .       PASS    AA=T;DP=98      GT:GQ:DP        0|0:47:14       0|1:100:17      0|0:100:54
+13     68117267        rs61949601      A       G       .       PASS    AA=A;DP=100     GT:GQ:DP        0|0:47:14       0|1:100:17      0|0:100:68
+5      13257071        rs10069199      C       T       .       PASS    AA=C;DP=71      GT:GQ:DP        0|0:47:14       0|1:100:17      0|0:75:27
+4      135851283       rs55727440      G       A       .       PASS    AA=A;DP=74      GT:GQ:DP        0|0:47:14       0|1:100:18      0|0:100:41
+7      116793990       .       A       T       .       PASS    AA=A;DP=83      GT:GQ:DP        0|0:47:14       0|1:100:18      0|0:100:49
+4      149851243       .       G       T       .       PASS    AA=G;DP=81      GT:GQ:DP        0|0:47:14       0|1:100:18      0|0:100:50
+2      163570914       rs6708695       G       A       .       PASS    AA=G;DP=92      GT:GQ:DP        0|0:47:14       0|1:100:18      0|0:100:60
+4      175984786       .       A       G       .       PASS    AA=A;DP=94      GT:GQ:DP        0|0:47:14       0|1:100:19      0|0:100:59
+2      152025915       .       G       A       .       PASS    AA=A;DP=109     GT:GQ:DP        0|0:47:14       0|1:100:19      0|0:100:76
+4      102678125       .       T       A       .       PASS    AA=T;DP=98      GT:GQ:DP        0|0:47:14       0|1:100:20      0|0:100:65
+14     75940733        rs10145375      C       G       .       PASS    AA=C;DP=100     GT:GQ:DP        0|0:47:14       0|1:100:20      0|0:100:66
+2      163534410       rs12692665      T       C       .       PASS    AA=T;DP=102     GT:GQ:DP        0|0:47:14       0|1:100:21      0|0:100:52
+9      17844342        rs10120309      A       G       .       PASS    AA=A;DP=109     GT:GQ:DP        0|0:47:14       0|1:100:21      0|0:99:34
+X      77825057        rs4826069       T       C       .       PASS    AA=C;DP=116     GT:GQ:DP        0|0:47:14       0|1:100:22      0|0:100:36
+4      169178195       .       A       G       .       PASS    AA=A;DP=90      GT:GQ:DP        0|0:47:14       0|1:100:22      0|0:100:51
+13     32258026        rs7320859       C       T       .       PASS    AA=C;DP=99      GT:GQ:DP        0|0:47:14       0|1:100:22      0|0:100:66
+11     54564902        rs61895825      C       T       .       PASS    AA=.;DP=82      GT:GQ:DP        0|0:47:14       0|1:100:23      0|0:100:42
+7      14770889        .       C       T       .       PASS    AA=c;DP=106     GT:GQ:DP        0|0:47:14       0|1:100:23      0|0:100:70
+X      12067487        .       C       T       .       PASS    AA=C;DP=107     GT:GQ:DP        0|0:47:14       0|1:100:23      0|0:90:30
+X      11708357        rs12014765      T       G       .       PASS    AA=N;DP=114     GT:GQ:DP        0|0:47:14       0|1:100:24      0|0:100:45
+11     21699343        rs1159680       C       A       .       PASS    AA=C;DP=133     GT:GQ:DP        0|0:47:14       0|1:100:25      0|0:100:43
+6      102899871       .       T       C       .       PASS    AA=T;DP=94      GT:GQ:DP        0|0:47:14       0|1:100:26      0|0:100:53
+16     72789248        .       A       T       .       PASS    AA=a;DP=95      GT:GQ:DP        0|0:47:14       0|1:100:26      0|0:100:56
+21     15840943        .       G       C       .       PASS    AA=C;DP=102     GT:GQ:DP        0|0:47:14       0|1:100:26      0|0:100:64
+8      96965464        .       T       C       .       PASS    AA=T;DP=128     GT:GQ:DP        0|0:47:14       0|1:100:27      0|0:100:39
+X      54646277        rs5915145       A       T       .       PASS    AA=A;DP=105     GT:GQ:DP        0|0:47:14       0|1:100:29      0|0:99:33
+X      3057772 rs9320054       G       A       .       PASS    AA=A;DP=118     GT:GQ:DP        0|0:47:14       0|1:100:30      0|0:100:50
+X      43283475        .       A       T       .       PASS    AA=A;DP=131     GT:GQ:DP        0|0:47:14       0|1:100:34      0|0:100:38
+1      187732005       .       T       A       .       PASS    AA=T;DP=80      GT:GQ:DP        0|0:47:15       0|1:100:11      0|0:100:56
+7      21033995        .       G       A       .       PASS    AA=G;DP=89      GT:GQ:DP        0|0:47:15       0|1:100:11      0|0:100:65
+8      4109587 .       T       C       .       PASS    AA=T;DP=64      GT:GQ:DP        0|0:47:15       0|1:100:12      0|0:72:26
+16     75000133        rs62051218      G       A       .       PASS    AA=G;DP=75      GT:GQ:DP        0|0:47:15       0|1:100:13      0|0:100:48
+2      147232638       rs12468279      A       G       .       PASS    AA=a;DP=80      GT:GQ:DP        0|0:47:15       0|1:100:13      0|0:100:51
+13     90577699        .       C       T       .       PASS    AA=C;DP=96      GT:GQ:DP        0|0:47:15       0|1:100:16      0|0:100:66
+5      120268811       .       G       C       .       PASS    AA=G;DP=112     GT:GQ:DP        0|0:47:15       0|1:100:17      0|0:100:34
+X      8839687 .       G       A       .       PASS    AA=G;DP=90      GT:GQ:DP        0|0:47:15       0|1:100:17      0|0:100:37
+3      164173562       rs35162401      A       G       .       PASS    AA=A;DP=72      GT:GQ:DP        0|0:47:15       0|1:100:19      0|0:51:17
+4      12320311        rs12503040      A       T       .       PASS    AA=A;DP=100     GT:GQ:DP        0|0:47:15       0|1:100:20      0|0:100:67
+1      186893660       .       A       G       .       PASS    AA=A;DP=63      GT:GQ:DP        0|0:47:15       0|1:100:21      0|0:57:19
+6      114299470       rs10499076      T       C       .       PASS    AA=T;DP=101     GT:GQ:DP        0|0:47:15       0|1:100:21      0|0:72:24
+X      144929316       rs60581195      A       G       .       PASS    AA=A;DP=110     GT:GQ:DP        0|0:47:15       0|1:100:22      0|0:77:33
+6      62789886        .       C       T       .       PASS    AA=C;DP=75      GT:GQ:DP        0|0:47:15       0|1:100:22      0|0:81:27
+X      87578447        .       G       A       .       PASS    AA=G;DP=117     GT:GQ:DP        0|0:47:15       0|1:100:24      0|0:100:37
+13     106798475       .       G       C       .       PASS    AA=G;DP=94      GT:GQ:DP        0|0:47:15       0|1:100:24      0|0:100:55
+1      103467659       rs12089837      G       T       .       PASS    AA=G;DP=74;HM2  GT:GQ:DP        0|0:47:15       1|0:100:11      0|1:100:50
+12     88828574        .       A       G       .       PASS    AA=A;DP=82      GT:GQ:DP        0|0:47:15       1|0:100:16      0|1:100:49
+15     21652286        rs58011614      T       A       .       PASS    AA=.;DP=105     GT:GQ:DP        0|0:47:15       1|0:100:16      0|1:100:74
+4      59300115        rs9993822       C       T       .       PASS    AA=T;DP=78      GT:GQ:DP        0|0:47:15       1|0:100:17      0|1:100:36
+1      105212580       .       A       G       .       PASS    AA=A;DP=77      GT:GQ:DP        0|0:47:15       1|0:100:17      0|1:100:45
+3      12339703        rs12631389      A       G       .       PASS    AA=G;DP=98      GT:GQ:DP        0|0:47:15       1|0:100:18      0|1:100:67
+X      4132612 rs5916523       A       G       .       PASS    AA=.;DP=92      GT:GQ:DP        0|0:47:15       1|0:100:19      0|1:100:26
+2      103744726       rs11890881      A       C       .       PASS    AA=A;DP=87      GT:GQ:DP        0|0:47:15       1|0:100:19      0|1:100:50
+4      35597912        rs60230344      C       G       .       PASS    AA=C;DP=94      GT:GQ:DP        0|0:47:15       1|0:100:19      0|1:100:64
+2      83404583        rs6745924       G       C       .       PASS    AA=A;DP=95      GT:GQ:DP        0|0:47:15       1|0:100:21      0|1:100:61
+14     21539449        rs60504474      C       T       .       PASS    AA=T;DP=83      GT:GQ:DP        0|0:47:15       1|0:100:22      0|1:100:43
+12     30572045        .       T       A       .       PASS    AA=T;DP=92      GT:GQ:DP        0|0:47:15       1|0:100:23      0|1:100:53
+X      116371080       rs2158777       G       A       .       PASS    AA=A;DP=85      GT:GQ:DP        0|0:47:15       1|0:100:24      0|1:100:30
+9      31180139        rs12338234      A       G       .       PASS    AA=A;DP=104     GT:GQ:DP        0|0:47:15       1|0:100:24      0|1:100:68
+5      106764470       rs17159895      A       G       .       PASS    AA=A;DP=108     GT:GQ:DP        0|0:47:15       1|0:100:24      0|1:100:69
+X      108601301       rs2267976       C       T       .       PASS    AA=T;DP=111     GT:GQ:DP        0|0:47:15       1|0:100:25      0|1:100:47
+11     105844372       .       G       T       .       PASS    AA=G;DP=96      GT:GQ:DP        0|0:47:15       1|0:100:26      0|1:100:56
+4      105532153       rs59575526      T       C       .       PASS    AA=T;DP=110     GT:GQ:DP        0|0:47:15       1|0:100:26      0|1:100:65
+X      30454780        rs2867192       A       G       .       PASS    AA=A;DP=94      GT:GQ:DP        0|0:47:15       1|0:100:28      0|1:100:23
+X      71621110        rs60075989      T       A       .       PASS    AA=.;DP=94      GT:GQ:DP        0|0:47:15       1|0:100:28      0|1:100:25
+2      209057468       .       T       C       .       PASS    AA=T;DP=103     GT:GQ:DP        0|0:47:15       1|0:100:29      0|1:100:57
+X      22784036        rs13441166      G       A       .       PASS    AA=g;DP=116     GT:GQ:DP        0|0:47:15       1|0:100:30      0|1:100:33
+15     51345637        rs62006005      C       T       .       PASS    AA=C;DP=114     GT:GQ:DP        0|0:47:15       1|0:100:32      0|1:100:66
+X      42113234        .       G       A       .       PASS    AA=G;DP=116     GT:GQ:DP        0|0:47:15       1|0:100:35      0|1:100:36
+3      191905886       .       C       G       .       PASS    AA=C;DP=126     GT:GQ:DP        0|0:47:15       1|0:100:42      0|1:100:69
+11     58386534        rs572776        A       C       .       PASS    AA=c;DP=90      GT:GQ:DP        0|0:47:15       1|0:12:15       0|1:100:63
+21     45630909        rs7277129       C       A       .       PASS    AA=C;DP=63      GT:GQ:DP        0|0:47:15       1|0:30:16       0|1:100:29
+4      28082029        rs58886597      C       T       .       PASS    AA=C;DP=75      GT:GQ:DP        0|0:47:15       1|0:35:13       0|1:100:38
+19     4448526 rs60674966      G       C       .       PASS    AA=G;DP=83      GT:GQ:DP        0|0:47:15       1|0:47:7        0|1:100:60
+1      215965434       .       T       A       .       PASS    AA=T;DP=68      GT:GQ:DP        0|0:47:15       1|0:48:9        0|1:100:36
+8      461412  rs13249003      G       A       .       PASS    AA=A;DP=76      GT:GQ:DP        0|0:47:15       1|0:71:15       0|1:100:45
+21     24213428        .       T       G       .       PASS    AA=T;DP=84      GT:GQ:DP        0|0:47:15       1|0:72:17       0|1:100:52
+3      77351238        .       A       C       .       PASS    AA=A;DP=81      GT:GQ:DP        0|0:47:15       1|0:74:14       0|1:100:50
+10     36559353        rs1219485       C       T       .       PASS    AA=C;DP=75      GT:GQ:DP        0|0:47:15       1|0:75:14       0|1:100:47
+7      145243988       rs59677597      A       C       .       PASS    AA=A;DP=87      GT:GQ:DP        0|0:47:15       1|0:75:9        0|1:100:60
+6      125496917       .       A       G       .       PASS    AA=A;DP=80      GT:GQ:DP        0|0:47:15       1|0:78:13       0|1:100:56
+1      79128716        rs12061538      C       A       .       PASS    AA=C;DP=78;HM2  GT:GQ:DP        0|0:47:15       1|0:78:14       0|1:100:50
+X      30162232        rs12008668      A       C       .       PASS    AA=A;DP=107     GT:GQ:DP        0|0:47:15       1|0:78:20       0|1:100:38
+6      69635461        rs523962        G       T       .       PASS    AA=G;DP=100     GT:GQ:DP        0|0:47:15       1|0:84:22       0|1:100:64
+4      74595544        rs2141465       G       T       .       PASS    AA=G;DP=67      GT:GQ:DP        0|0:47:15       1|0:90:13       0|1:100:39
+4      114398248       .       C       A       .       PASS    AA=C;DP=79      GT:GQ:DP        0|0:47:15       1|0:90:14       0|1:100:52
+X      102141158       rs16984193      C       A       .       PASS    AA=c;DP=89      GT:GQ:DP        0|0:47:15       1|0:90:20       0|1:88:29
+7      70060620        rs59564919      T       G       .       PASS    AA=T;DP=94      GT:GQ:DP        0|0:47:15       1|0:92:23       0|1:100:56
+12     46314345        .       A       T       .       PASS    AA=a;DP=73      GT:GQ:DP        0|0:47:15       1|0:93:14       0|1:100:40
+3      55198091        rs7637222       C       T       .       PASS    AA=C;DP=91      GT:GQ:DP        0|0:47:15       1|0:93:19       0|1:100:60
+10     58113326        rs10733963      A       G       .       PASS    AA=G;DP=55      GT:GQ:DP        0|0:47:15       1|0:94:16       0|1:100:25
+10     68301604        rs9415867       C       T       .       PASS    AA=T;DP=89      GT:GQ:DP        0|0:47:15       1|0:99:19       0|1:100:55
+3      76040426        .       T       A       .       PASS    AA=T;DP=85      GT:GQ:DP        0|0:47:16       0|1:100:17      0|0:100:52
+5      22788344        .       A       T       .       PASS    AA=A;DP=107     GT:GQ:DP        0|0:47:16       1|0:100:14      0|1:100:30
+5      52377840        rs3212467       C       T       .       PASS    AA=T;DP=86      GT:GQ:DP        0|0:47:16       1|0:100:18      0|1:100:52
+2      115484703       rs989037        A       G       .       PASS    AA=A;DP=81      GT:GQ:DP        0|0:47:16       1|0:100:19      0|1:100:46
+14     57401068        rs9323319       G       A       .       PASS    AA=G;DP=97      GT:GQ:DP        0|0:47:16       1|0:100:25      0|1:100:42
+7      34656423        rs10237345      C       T       .       PASS    AA=c;DP=86      GT:GQ:DP        0|0:47:16       1|0:100:26      0|1:78:27
+10     19443742        .       C       T       .       PASS    AA=c;DP=109     GT:GQ:DP        0|0:47:16       1|0:100:31      0|1:100:60
+8      118689925       .       T       C       .       PASS    AA=T;DP=70      GT:GQ:DP        0|0:47:16       1|0:13:14       0|1:79:31
+21     20426086        rs2826026       C       T       .       PASS    AA=T;DP=75      GT:GQ:DP        0|0:47:16       1|0:69:9        0|1:100:49
+10     78564352        .       C       T       .       PASS    AA=T;DP=83      GT:GQ:DP        0|0:47:16       1|0:85:14       0|1:100:54
+X      43902776        rs41456646      T       A       .       PASS    AA=T;DP=103     GT:GQ:DP        0|0:47:16       1|0:88:14       0|1:100:37
+17     22074549        .       T       G       .       PASS    AA=T;DP=77      GT:GQ:DP        0|0:47:16       1|0:94:18       0|1:100:29
+9      25039197        .       A       G       .       PASS    AA=a;DP=87      GT:GQ:DP        0|0:47:17       1|0:100:18      0|1:100:52
+20     42701338        rs6103795       C       T       .       PASS    AA=C;DP=123     GT:GQ:DP        0|0:47:18       1|0:100:21      0|1:100:80
+18     21304494        rs2111502       A       G       .       PASS    AA=A;DP=102     GT:GQ:DP        0|0:47:19       0|1:100:24      0|0:100:61
+18     25917771        rs9945496       T       C       .       PASS    AA=T;DP=114     GT:GQ:DP        0|0:47:20       0|1:100:18      0|0:99:33
+1      87946584        .       A       T       .       PASS    AA=A;DP=114     GT:GQ:DP        0|0:47:20       0|1:100:19      0|0:100:77
+12     121897288       .       G       A       .       PASS    AA=g;DP=84      GT:GQ:DP        0|0:47:21       0|1:100:11      0|0:100:44
+4      81252619        rs57176582      C       T       .       PASS    AA=C;DP=89      GT:GQ:DP        0|0:47:21       0|1:100:18      0|0:100:53
+13     38027777        .       C       A       .       PASS    AA=C;DP=89      GT:GQ:DP        0|0:47:21       1|0:100:28      0|1:100:39
+8      14906272        rs9694784       G       T       .       PASS    AA=G;DP=97      GT:GQ:DP        0|0:47:22       0|1:100:19      0|0:100:60
+1      79078149        rs4650616       A       G       .       PASS    AA=A;DP=104;HM2 GT:GQ:DP        0|0:47:22       1|0:100:20      0|1:100:62
+6      109547287       .       A       C       .       PASS    AA=a;DP=138     GT:GQ:DP        0|0:47:23       1|0:100:30      0|1:100:86
+13     104101026       rs9519437       A       G       .       PASS    AA=A;DP=114     GT:GQ:DP        0|0:47:24       0|1:100:21      0|0:100:70
+6      117904705       rs6920159       T       C       .       PASS    AA=T;DP=100     GT:GQ:DP        0|0:47:24       1|0:100:17      0|1:100:59
+9      34293922        rs7862080       A       G       .       PASS    AA=G;DP=96      GT:GQ:DP        0|0:47:24       1|1:44:22       0|1:100:50
+4      31250377        rs11932796      T       G       .       PASS    AA=T;DP=116     GT:GQ:DP        0|0:47:24       1|1:57:23       0|1:100:66
+1      156729749       .       G       C       .       PASS    AA=G;DP=128     GT:GQ:DP        0|0:47:25       1|0:100:25      0|1:100:77
+8      14966861        rs61299315      C       A       .       PASS    AA=C;DP=143     GT:GQ:DP        0|0:47:25       1|0:100:29      0|1:100:90
+1      171908073       rs7539992       T       A       .       PASS    AA=T;DP=129;HM2;HM3     GT:GQ:DP        0|0:47:25       1|0:100:31      0|1:100:75
+3      96826372        rs6437974       C       A       .       PASS    AA=C;DP=64      GT:GQ:DP        0|0:47:25       1|0:48:10       0|1:100:19
+5      3276420 rs1215687       G       A       .       PASS    AA=G;DP=146     GT:GQ:DP        0|0:47:26       0|1:100:22      0|0:100:43
+5      113713981       rs636200        T       C       .       PASS    AA=C;DP=89      GT:GQ:DP        0|0:47:27       1|1:20:17       0|1:100:46
+6      31489719        rs7774193       A       C       .       PASS    AA=N;DP=101     GT:GQ:DP        0|0:47:27       1|1:46:17       0|1:100:45
+2      69073807        rs57820541      G       T       .       PASS    AA=G;DP=119     GT:GQ:DP        0|0:47:27       1|1:49:18       0|1:100:70
+17     78509835        .       C       G       .       PASS    AA=c;DP=115     GT:GQ:DP        0|0:47:27       1|1:49:19       0|1:100:68
+7      139161415       .       C       A       .       PASS    AA=C;DP=120     GT:GQ:DP        0|0:47:27       1|1:61:22       0|1:100:72
+1      33803428        rs6693247       G       T       .       PASS    AA=T;DP=135;HM3 GT:GQ:DP        0|0:47:27       1|1:85:30       0|1:100:79
+7      124187941       rs3807544       G       A       .       PASS    AA=A;DP=128     GT:GQ:DP        0|0:47:27       1|1:97:34       0|1:100:68
+16     7419206 .       G       A       .       PASS    AA=G;DP=143     GT:GQ:DP        0|0:47:28       0|1:100:21      0|0:100:95
+7      158381467       rs60114386      G       T       .       PASS    AA=G;DP=106     GT:GQ:DP        0|0:47:28       0|1:100:26      0|0:100:51
+1      83334004        .       A       G       .       PASS    AA=A;DP=134     GT:GQ:DP        0|0:47:28       1|0:49:28       0|1:100:81
+20     6861326 rs16992802      G       A       .       PASS    AA=G;DP=122     GT:GQ:DP        0|0:47:30       1|0:62:21       0|1:100:71
+6      162944029       .       C       A       .       PASS    AA=C;DP=129     GT:GQ:DP        0|0:47:34       1|0:100:24      0|1:100:71
+X      115275739       rs60405377      A       T       .       PASS    AA=A;DP=144     GT:GQ:DP        0|0:48:16       1|1:100:40      0|1:100:38
+1      194847524       rs6428351       T       C       .       PASS    AA=C;DP=96      GT:GQ:DP        0|0:48:16       1|1:13:6        0|1:100:74
+4      158770059       rs1387994       C       T       .       PASS    AA=T;DP=87      GT:GQ:DP        0|0:48:16       1|1:19:19       0|1:100:52
+15     33555564        .       T       C       .       PASS    AA=T;DP=65      GT:GQ:DP        0|0:48:16       1|1:28:15       0|1:100:26
+3      17380156        rs58035365      G       A       .       PASS    AA=G;DP=86      GT:GQ:DP        0|0:48:16       1|1:29:17       0|1:100:52
+13     36234770        rs10219999      A       G       .       PASS    AA=G;DP=99      GT:GQ:DP        0|0:48:16       1|1:31:14       0|1:100:69
+3      147184828       .       G       A       .       PASS    AA=G;DP=91      GT:GQ:DP        0|0:48:16       1|1:43:16       0|1:100:57
+4      70070416        rs34915607      T       C       .       PASS    AA=-;DP=80      GT:GQ:DP        0|0:48:16       1|1:43:17       0|1:100:43
+6      127490939       rs1474696       A       G       .       PASS    AA=G;DP=95      GT:GQ:DP        0|0:48:16       1|1:43:17       0|1:100:65
+X      68447989        rs6653275       T       C       .       PASS    AA=T;DP=106     GT:GQ:DP        0|0:48:16       1|1:43:22       0|1:100:34
+2      192233022       rs4600590       A       G       .       PASS    AA=A;DP=54      GT:GQ:DP        0|0:48:16       1|1:49:19       0|1:100:15
+5      59636409        .       T       C       .       PASS    AA=T;DP=95      GT:GQ:DP        0|0:48:16       1|1:49:21       0|1:100:55
+2      181078750       rs2013577       C       T       .       PASS    AA=C;DP=75      GT:GQ:DP        0|0:48:16       1|1:52:20       0|1:100:25
+X      32510649        rs808564        T       G       .       PASS    AA=T;DP=83      GT:GQ:DP        0|0:48:16       1|1:55:20       0|1:100:25
+X      125168119       rs12009868      G       A       .       PASS    AA=g;DP=103     GT:GQ:DP        0|0:48:16       1|1:61:22       0|1:100:37
+X      19735942        rs6527946       T       C       .       PASS    AA=T;DP=123     GT:GQ:DP        0|0:48:16       1|1:61:23       0|1:100:52
+4      117604847       .       A       G       .       PASS    AA=G;DP=93      GT:GQ:DP        0|0:48:16       1|1:67:24       0|1:100:52
+X      75359826        rs7877781       G       C       .       PASS    AA=N;DP=114     GT:GQ:DP        0|0:48:16       1|1:70:27       0|1:100:28
+11     87760179        rs1451611       T       C       .       PASS    AA=T;DP=112     GT:GQ:DP        0|0:48:16       1|1:97:34       0|1:100:62
+X      84914526        rs57512034      T       A       .       PASS    AA=t;DP=110     GT:GQ:DP        0|0:48:17       1|1:39:26       0|1:100:45
+X      135507212       rs2157738       C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        0|0:48:17       1|1:47:26       0|1:100:41
+X      83733267        .       T       A       .       PASS    AA=T;DP=118     GT:GQ:DP        0|0:48:17       1|1:49:18       0|1:100:38
+12     66097028        rs17120710      G       T       .       PASS    AA=G;DP=96      GT:GQ:DP        0|0:48:17       1|1:49:18       0|1:100:61
+X      85230385        rs12012842      G       C       .       PASS    AA=G;DP=126     GT:GQ:DP        0|0:48:17       1|1:56:32       0|1:100:39
+4      38790280        rs1560397       T       C       .       PASS    AA=C;DP=95      GT:GQ:DP        0|0:48:18       1|1:67:24       0|1:100:55
+2      116763966       rs7561478       C       T       .       PASS    AA=c;DP=102     GT:GQ:DP        0|0:48:18       1|1:67:25       0|1:100:59
+1      186592098       rs12049611      G       A       .       PASS    AA=N;DP=87      GT:GQ:DP        0|0:48:19       1|1:52:21       0|1:100:36
+9      108400029       rs59581325      G       A       .       PASS    AA=g;DP=95      GT:GQ:DP        0|0:48:21       0|1:100:20      0|0:100:54
+9      3276217 rs2991288       C       T       .       PASS    AA=T;DP=124     GT:GQ:DP        0|0:48:21       0|1:100:27      0|0:100:70
+5      155144085       rs13361977      T       G       .       PASS    AA=T;DP=103     GT:GQ:DP        0|0:48:21       1|0:100:17      0|1:100:65
+6      6888167 rs2802436       T       C       .       PASS    AA=T;DP=105     GT:GQ:DP        0|0:48:21       1|0:100:18      0|1:100:63
+4      59044260        .       T       C       .       PASS    AA=T;DP=111     GT:GQ:DP        0|0:48:21       1|0:100:20      0|1:100:70
+4      146446542       .       T       C       .       PASS    AA=T;DP=99      GT:GQ:DP        0|0:48:22       1|0:100:31      0|1:100:47
+2      47492885        rs6737783       T       C       .       PASS    AA=t;DP=97      GT:GQ:DP        0|0:48:24       0|1:100:24      0|0:100:50
+22     44905674        rs135574        A       C       .       PASS    AA=C;DP=101     GT:GQ:DP        0|0:48:24       1|0:41:17       0|1:100:60
+10     111150975       rs7090054       A       T       .       PASS    AA=T;DP=127     GT:GQ:DP        0|0:48:26       1|1:14:17       0|1:100:85
+1      232120708       rs1937265       G       T       .       PASS    AA=G;DP=123;HM2 GT:GQ:DP        0|0:48:30       0|1:100:32      0|0:100:60
+6      85176971        rs10943982      A       C       .       PASS    AA=A;DP=113     GT:GQ:DP        0|0:48:31       1|0:100:26      0|1:100:61
+9      133487679       rs12375830      G       A       .       PASS    AA=G;DP=131     GT:GQ:DP        0|0:48:31       1|0:95:17       0|1:100:43
+12     6070716 .       T       G       .       PASS    AA=t;DP=96      GT:GQ:DP        0|0:48:36       1|0:54:16       0|1:100:36
+5      121565992       .       C       G       .       PASS    AA=C;DP=74      GT:GQ:DP        0|0:49:17       1|0:59:14       0|1:100:41
+1      6184818 rs10864434      A       T       .       PASS    AA=T;DP=88      GT:GQ:DP        0|0:49:17       1|1:4:11        0|1:100:23
+7      89374695        rs1860585       G       A       .       PASS    AA=A;DP=89      GT:GQ:DP        0|0:49:18       0|1:100:23      0|0:100:49
+8      60597029        rs7823276       T       C       .       PASS    AA=T;DP=112     GT:GQ:DP        0|0:49:20       0|1:100:20      0|0:100:75
+18     69498964        rs12969840      T       A       .       PASS    AA=A;DP=101     GT:GQ:DP        0|0:49:20       1|0:100:25      0|1:100:55
+9      6606249 .       A       C       .       PASS    AA=A;DP=95      GT:GQ:DP        0|0:49:21       0|1:100:20      0|0:100:55
+2      1023890 rs11127448      T       G       .       PASS    AA=T;DP=122     GT:GQ:DP        0|0:49:21       0|1:100:24      0|0:100:77
+3      148810420       .       C       A       .       PASS    AA=C;DP=88      GT:GQ:DP        0|0:49:21       1|0:100:21      0|1:100:47
+14     84981815        rs11850627      T       C       .       PASS    AA=T;DP=125     GT:GQ:DP        0|0:49:21       1|0:20:16       0|1:100:43
+8      108261778       rs10955443      G       A       .       PASS    AA=G;DP=132     GT:GQ:DP        0|0:49:22       1|0:100:24      0|1:100:32
+12     86237283        rs10219442      A       G       .       PASS    AA=G;DP=118     GT:GQ:DP        0|0:49:22       1|0:100:26      0|1:100:28
+4      15743218        rs317898        A       C       .       PASS    AA=C;DP=96      GT:GQ:DP        0|0:49:22       1|1:12:16       0|1:100:58
+10     101482823       rs2006077       A       T       .       PASS    AA=A;DP=82      GT:GQ:DP        0|0:49:22       1|1:13:6        0|1:100:55
+7      136067228       .       G       A       .       PASS    AA=G;DP=109     GT:GQ:DP        0|0:49:23       1|0:94:20       0|1:100:66
+11     9471895 rs723297        C       A       .       PASS    AA=A;DP=98      GT:GQ:DP        0|0:49:23       1|1:13:16       0|1:100:62
+13     109160404       rs7989944       T       C       .       PASS    AA=T;DP=101     GT:GQ:DP        0|0:49:24       1|0:100:25      0|1:100:52
+5      56279060        rs58568222      C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        0|0:49:24       1|0:100:27      0|1:100:59
+1      102577591       rs6657121       C       A       .       PASS    AA=C;DP=132     GT:GQ:DP        0|0:49:24       1|0:100:32      0|1:100:75
+12     100061315       rs7397905       A       G       .       PASS    AA=A;DP=85      GT:GQ:DP        0|0:49:24       1|0:24:11       0|1:100:44
+3      31766968        .       A       G       .       PASS    AA=A;DP=98      GT:GQ:DP        0|0:49:24       1|0:28:20       0|1:100:54
+8      84366565        rs4739671       A       T       .       PASS    AA=A;DP=100     GT:GQ:DP        0|0:49:24       1|0:91:23       0|1:100:40
+1      103224043       rs7544130       A       C       .       PASS    AA=a;DP=122;HM2;HM3     GT:GQ:DP        0|0:49:25       0|1:100:21      0|0:100:74
+2      205677268       rs2289024       A       C       .       PASS    AA=A;DP=125     GT:GQ:DP        0|0:49:25       0|1:100:27      0|0:100:70
+9      24250531        rs17771607      C       G       .       PASS    AA=C;DP=121     GT:GQ:DP        0|0:49:26       0|1:100:16      0|0:95:38
+11     41790350        rs12807116      G       A       .       PASS    AA=A;DP=97      GT:GQ:DP        0|0:49:26       0|1:100:18      0|0:100:54
+13     94392623        .       T       C       .       PASS    AA=T;DP=114     GT:GQ:DP        0|0:49:26       0|1:100:20      0|0:100:68
+1      149329581       rs11204774      G       A       .       PASS    AA=G;DP=116;HM2;HM3     GT:GQ:DP        0|0:49:26       0|1:100:20      0|0:100:72
+1      7392867 .       A       G       .       PASS    AA=A;DP=133     GT:GQ:DP        0|0:49:26       0|1:100:20      0|0:100:88
+9      32524851        rs657454        G       A       .       PASS    AA=A;DP=110     GT:GQ:DP        0|0:49:26       0|1:100:21      0|0:100:64
+1      244236549       .       G       T       .       PASS    AA=G;DP=149     GT:GQ:DP        0|0:49:26       0|1:100:24      0|0:100:80
+6      7712740 rs62386966      A       G       .       PASS    AA=A;DP=102     GT:GQ:DP        0|0:49:26       0|1:100:27      0|0:100:51
+2      43022436        rs13385433      G       A       .       PASS    AA=G;DP=132     GT:GQ:DP        0|0:49:26       0|1:100:27      0|0:100:74
+6      40879600        .       G       T       .       PASS    AA=G;DP=149     GT:GQ:DP        0|0:49:26       0|1:100:29      0|0:100:56
+7      148976174       rs13247657      T       C       .       PASS    AA=T;DP=119     GT:GQ:DP        0|0:49:26       0|1:100:29      0|0:100:62
+9      88362451        rs17192371      C       A       .       PASS    AA=C;DP=111     GT:GQ:DP        0|0:49:26       1|0:100:23      0|1:100:63
+6      5919505 rs59470545      G       C       .       PASS    AA=G;DP=121     GT:GQ:DP        0|0:49:27       1|0:100:19      0|1:100:76
+11     2688098 .       A       T       .       PASS    AA=A;DP=104     GT:GQ:DP        0|0:49:27       1|0:100:20      0|1:100:57
+11     16485678        .       A       G       .       PASS    AA=A;DP=104     GT:GQ:DP        0|0:49:27       1|0:100:20      0|1:100:58
+1      155574510       .       T       C       .       PASS    AA=t;DP=104     GT:GQ:DP        0|0:49:27       1|0:100:20      0|1:100:60
+15     81883025        .       T       C       .       PASS    AA=T;DP=121     GT:GQ:DP        0|0:49:27       1|0:100:21      0|1:100:74
+2      20032613        rs13005512      T       A       .       PASS    AA=T;DP=106     GT:GQ:DP        0|0:49:27       1|0:100:22      0|1:100:58
+9      92895551        .       G       A       .       PASS    AA=G;DP=93      GT:GQ:DP        0|0:49:27       1|0:100:23      0|1:100:33
+2      203709766       .       C       T       .       PASS    AA=C;DP=99      GT:GQ:DP        0|0:49:27       1|0:100:24      0|1:100:49
+14     21816685        .       G       A       .       PASS    AA=G;DP=115     GT:GQ:DP        0|0:49:27       1|0:100:24      0|1:100:54
+11     92385225        rs271031        A       C       .       PASS    AA=A;DP=132     GT:GQ:DP        0|0:49:27       1|0:100:25      0|1:100:81
+16     88535191        .       T       A       .       PASS    AA=T;DP=102     GT:GQ:DP        0|0:49:27       1|0:100:27      0|1:100:36
+21     22963587        .       C       T       .       PASS    AA=C;DP=134     GT:GQ:DP        0|0:49:27       1|0:23:25       0|1:100:83
+3      98760946        rs1837093       A       G       .       PASS    AA=A;DP=115     GT:GQ:DP        0|0:49:27       1|0:36:10       0|1:100:76
+4      5697249 .       G       A       .       PASS    AA=G;DP=102     GT:GQ:DP        0|0:49:27       1|0:38:17       0|1:100:57
+4      18759836        rs5013969       T       C       .       PASS    AA=C;DP=92      GT:GQ:DP        0|0:49:27       1|1:38:21       0|1:100:29
+17     39614686        .       G       C       .       PASS    AA=G;DP=119     GT:GQ:DP        0|0:49:30       1|0:100:17      0|1:100:73
+1      211719555       .       T       C       .       PASS    AA=T;DP=80      GT:GQ:DP        0|0:50:15       0|1:100:14      0|0:100:48
+10     123986656       .       C       T       .       PASS    AA=C;DP=90      GT:GQ:DP        0|0:50:15       0|1:100:14      0|0:100:53
+4      122457330       .       A       G       .       PASS    AA=A;DP=90      GT:GQ:DP        0|0:50:15       0|1:100:14      0|0:100:59
+1      186122095       rs12062891      C       T       .       PASS    AA=c;DP=75      GT:GQ:DP        0|0:50:15       0|1:100:15      0|0:100:46
+10     82939339        rs7916998       A       C       .       PASS    AA=A;DP=88      GT:GQ:DP        0|0:50:15       0|1:100:16      0|0:100:57
+9      6990668 .       T       C       .       PASS    AA=T;DP=70      GT:GQ:DP        0|0:50:15       0|1:100:16      0|0:81:27
+6      93267986        rs57465815      G       A       .       PASS    AA=G;DP=96      GT:GQ:DP        0|0:50:15       0|1:100:17      0|0:100:50
+X      125298493       rs1290571       G       A       .       PASS    AA=G;DP=97      GT:GQ:DP        0|0:50:15       0|1:100:17      0|0:96:32
+13     89776249        .       C       G       .       PASS    AA=C;DP=91      GT:GQ:DP        0|0:50:15       0|1:100:18      0|0:100:56
+18     28351035        .       A       G       .       PASS    AA=A;DP=96      GT:GQ:DP        0|0:50:15       0|1:100:18      0|0:100:61
+8      15535921        rs7016983       C       T       .       PASS    AA=C;DP=114     GT:GQ:DP        0|0:50:15       0|1:100:18      0|0:100:80
+X      5819156 .       T       A       .       PASS    AA=t;DP=97      GT:GQ:DP        0|0:50:15       0|1:100:18      0|0:75:25
+X      79253138        .       A       T       .       PASS    AA=A;DP=97      GT:GQ:DP        0|0:50:15       0|1:100:18      0|0:99:35
+7      81625496        rs7778812       T       C       .       PASS    AA=T;DP=78      GT:GQ:DP        0|0:50:15       0|1:100:19      0|0:100:43
+4      187222569       rs28680717      G       A       .       PASS    AA=G;DP=89      GT:GQ:DP        0|0:50:15       0|1:100:19      0|0:100:55
+4      80519022        .       T       C       .       PASS    AA=T;DP=96      GT:GQ:DP        0|0:50:15       0|1:100:19      0|0:100:62
+3      85147470        rs17479424      C       G       .       PASS    AA=C;DP=96      GT:GQ:DP        0|0:50:15       0|1:100:19      0|0:100:63
+10     107848813       .       G       T       .       PASS    AA=G;DP=98      GT:GQ:DP        0|0:50:15       0|1:100:19      0|0:100:64
+1      107424301       rs1622864       C       G       .       PASS    AA=C;DP=105;HM2 GT:GQ:DP        0|0:50:15       0|1:100:19      0|0:100:69
+X      79150754        rs6621529       T       A       .       PASS    AA=A;DP=120     GT:GQ:DP        0|0:50:15       0|1:100:20      0|0:100:42
+13     107127138       rs4772903       T       C       .       PASS    AA=T;DP=79      GT:GQ:DP        0|0:50:15       0|1:100:20      0|0:100:44
+11     55809043        rs11227762      A       T       .       PASS    AA=a;DP=108     GT:GQ:DP        0|0:50:15       0|1:100:20      0|0:100:75
+11     25788099        rs12286411      A       G       .       PASS    AA=G;DP=91      GT:GQ:DP        0|0:50:15       0|1:100:21      0|0:100:44
+10     9511929 .       A       G       .       PASS    AA=A;DP=87      GT:GQ:DP        0|0:50:15       0|1:100:21      0|0:100:46
+1      80948041        .       T       C       .       PASS    AA=T;DP=83      GT:GQ:DP        0|0:50:15       0|1:100:21      0|0:100:49
+9      11564065        .       A       G       .       PASS    AA=A;DP=91      GT:GQ:DP        0|0:50:15       0|1:100:21      0|0:100:54
+20     39395162        rs16985655      G       A       .       PASS    AA=G;DP=94      GT:GQ:DP        0|0:50:15       0|1:100:21      0|0:100:58
+X      33824455        rs62592198      A       G       .       PASS    AA=A;DP=111     GT:GQ:DP        0|0:50:15       0|1:100:22      0|0:100:44
+5      147700680       rs17776554      T       C       .       PASS    AA=T;DP=81      GT:GQ:DP        0|0:50:15       0|1:100:22      0|0:100:45
+13     60622885        .       T       C       .       PASS    AA=T;DP=81      GT:GQ:DP        0|0:50:15       0|1:100:23      0|0:100:43
+3      77516016        .       A       G       .       PASS    AA=A;DP=95      GT:GQ:DP        0|0:50:15       0|1:100:23      0|0:100:59
+3      22023884        .       T       C       .       PASS    AA=T;DP=97      GT:GQ:DP        0|0:50:15       0|1:100:23      0|0:100:60
+7      121475316       rs1206355       A       G       .       PASS    AA=A;DP=97      GT:GQ:DP        0|0:50:15       0|1:100:23      0|0:100:61
+7      10302688        rs17439615      G       A       .       PASS    AA=G;DP=118     GT:GQ:DP        0|0:50:15       0|1:100:23      0|0:100:76
+X      82153886        .       C       T       .       PASS    AA=C;DP=126     GT:GQ:DP        0|0:50:15       0|1:100:24      0|0:100:43
+21     21639825        rs2218432       A       G       .       PASS    AA=A;DP=92      GT:GQ:DP        0|0:50:15       0|1:100:24      0|0:100:53
+X      12220163        .       T       C       .       PASS    AA=T;DP=143     GT:GQ:DP        0|0:50:15       0|1:100:25      0|0:100:42
+X      150306354       rs16995954      T       C       .       PASS    AA=t;DP=164     GT:GQ:DP        0|0:50:15       0|1:100:25      0|0:100:56
+5      90866364        .       A       G       .       PASS    AA=A;DP=116     GT:GQ:DP        0|0:50:15       0|1:100:25      0|0:100:78
+2      51575183        rs17864514      C       T       .       PASS    AA=C;DP=76      GT:GQ:DP        0|0:50:15       0|1:100:25      0|0:84:28
+X      2725425 rs4484858       A       G       .       PASS    AA=G;DP=119     GT:GQ:DP        0|0:50:15       0|1:100:26      0|0:100:55
+4      91517601        rs28444333      T       C       .       PASS    AA=T;DP=102     GT:GQ:DP        0|0:50:15       0|1:100:26      0|0:100:59
+13     69154584        rs2325240       T       A       .       PASS    AA=T;DP=103     GT:GQ:DP        0|0:50:15       0|1:100:26      0|0:100:62
+X      148689727       .       G       A       .       PASS    AA=G;DP=126     GT:GQ:DP        0|0:50:15       0|1:100:27      0|0:100:42
+X      69042243        rs7053707       T       C       .       PASS    AA=T;DP=120     GT:GQ:DP        0|0:50:15       0|1:100:27      0|0:87:29
+1      82661166        .       T       G       .       PASS    AA=T;DP=109     GT:GQ:DP        0|0:50:15       0|1:100:28      0|0:100:64
+X      40312076        rs57342630      G       A       .       PASS    AA=G;DP=140     GT:GQ:DP        0|0:50:15       0|1:100:30      0|0:100:49
+11     51353584        .       C       T       .       PASS    AA=c;DP=106     GT:GQ:DP        0|0:50:15       0|1:100:30      0|0:100:58
+X      132573589       rs16993049      A       T       .       PASS    AA=T;DP=133     GT:GQ:DP        0|0:50:15       0|1:100:31      0|0:61:32
+14     96381653        .       T       G       .       PASS    AA=T;DP=124     GT:GQ:DP        0|0:50:15       0|1:100:31      0|0:97:40
+4      128220415       .       G       A       .       PASS    AA=G;DP=90      GT:GQ:DP        0|0:50:16       0|1:100:11      0|0:100:61
+6      50234100        rs12209239      G       A       .       PASS    AA=C;DP=86      GT:GQ:DP        0|0:50:16       0|1:100:11      0|0:100:62
+X      97892306        rs55774058      A       T       .       PASS    AA=a;DP=77      GT:GQ:DP        0|0:50:16       0|1:100:11      0|0:87:29
+9      77646108        .       G       C       .       PASS    AA=G;DP=91      GT:GQ:DP        0|0:50:16       0|1:100:13      0|0:100:64
+1      237741397       .       A       G       .       PASS    AA=A;DP=93      GT:GQ:DP        0|0:50:16       0|1:100:15      0|0:100:61
+7      49336537        rs12718173      G       A       .       PASS    AA=G;DP=64      GT:GQ:DP        0|0:50:16       0|1:100:15      0|0:63:22
+3      18341215        .       T       G       .       PASS    AA=t;DP=84      GT:GQ:DP        0|0:50:16       0|1:100:18      0|0:100:50
+20     9881091 rs2225533       G       A       .       PASS    AA=g;DP=77      GT:GQ:DP        0|0:50:16       0|1:100:19      0|0:100:43
+15     92743044        rs10852210      C       T       .       PASS    AA=T;DP=92      GT:GQ:DP        0|0:50:16       0|1:100:19      0|0:100:59
+12     1655095 .       T       A       .       PASS    AA=T;DP=110     GT:GQ:DP        0|0:50:16       0|1:100:20      0|0:100:71
+X      29901727        rs16998050      C       T       .       PASS    AA=N;DP=118     GT:GQ:DP        0|0:50:16       0|1:100:22      0|0:90:30
+6      109745521       rs4945829       T       C       .       PASS    AA=T;DP=104     GT:GQ:DP        0|0:50:16       0|1:100:23      0|0:100:69
+3      36098853        rs60629271      T       G       .       PASS    AA=T;DP=110     GT:GQ:DP        0|0:50:16       0|1:100:23      0|0:100:72
+X      148913807       .       G       A       .       PASS    AA=g;DP=115     GT:GQ:DP        0|0:50:16       0|1:100:24      0|0:100:46
+2      67468183        .       C       T       .       PASS    AA=C;DP=92      GT:GQ:DP        0|0:50:16       0|1:100:24      0|0:100:53
+X      131157384       rs6637955       A       G       .       PASS    AA=A;DP=110     GT:GQ:DP        0|0:50:16       0|1:100:25      0|0:100:35
+2      190438714       rs5743161       T       C       .       PASS    AA=T;DP=79      GT:GQ:DP        0|0:50:16       1|0:100:15      0|1:100:47
+19     51229822        .       A       T       .       PASS    AA=t;DP=70      GT:GQ:DP        0|0:50:16       1|0:100:16      0|1:100:26
+1      190113457       rs1417378       T       A       .       PASS    AA=T;DP=80;HM2  GT:GQ:DP        0|0:50:16       1|0:100:16      0|1:100:48
+14     41538295        rs11622965      C       A       .       PASS    AA=C;DP=84      GT:GQ:DP        0|0:50:16       1|0:100:16      0|1:100:51
+4      29080559        rs59760059      A       G       .       PASS    AA=A;DP=86      GT:GQ:DP        0|0:50:16       1|0:100:16      0|1:100:54
+1      221252067       rs2789949       C       T       .       PASS    AA=C;DP=103     GT:GQ:DP        0|0:50:16       1|0:100:16      0|1:100:67
+4      180544006       rs13120153      T       C       .       PASS    AA=T;DP=77      GT:GQ:DP        0|0:50:16       1|0:100:17      0|1:100:39
+5      63165853        .       G       A       .       PASS    AA=A;DP=81      GT:GQ:DP        0|0:50:16       1|0:100:17      0|1:100:49
+3      28938677        .       G       A       .       PASS    AA=G;DP=92      GT:GQ:DP        0|0:50:16       1|0:100:17      0|1:100:55
+3      155679565       .       T       C       .       PASS    AA=T;DP=89      GT:GQ:DP        0|0:50:16       1|0:100:17      0|1:100:56
+21     28126564        rs243691        A       G       .       PASS    AA=G;DP=97      GT:GQ:DP        0|0:50:16       1|0:100:17      0|1:100:67
+9      29653163        .       C       T       .       PASS    AA=C;DP=85      GT:GQ:DP        0|0:50:16       1|0:100:18      0|1:100:39
+14     41269894        .       G       A       .       PASS    AA=A;DP=94      GT:GQ:DP        0|0:50:16       1|0:100:18      0|1:100:55
+12     42101560        rs4768497       A       C       .       PASS    AA=A;DP=65      GT:GQ:DP        0|0:50:16       1|0:100:19      0|1:100:17
+X      119254561       .       G       A       .       PASS    AA=G;DP=86      GT:GQ:DP        0|0:50:16       1|0:100:19      0|1:100:34
+4      66157192        rs34172096      T       C       .       PASS    AA=T;DP=83      GT:GQ:DP        0|0:50:16       1|0:100:19      0|1:100:49
+2      104086240       .       G       A       .       PASS    AA=G;DP=98      GT:GQ:DP        0|0:50:16       1|0:100:19      0|1:100:64
+13     67020687        rs7330013       T       C       .       PASS    AA=C;DP=104     GT:GQ:DP        0|0:50:16       1|0:100:19      0|1:100:68
+20     40445762        rs916328        G       A       .       PASS    AA=G;DP=122     GT:GQ:DP        0|0:50:16       1|0:100:19      0|1:100:87
+X      126583690       .       T       C       .       PASS    AA=T;DP=97      GT:GQ:DP        0|0:50:16       1|0:100:20      0|1:92:29
+6      160624726       rs2481035       G       C       .       PASS    AA=C;DP=77      GT:GQ:DP        0|0:50:16       1|0:100:21      0|1:100:38
+3      116326570       .       T       A       .       PASS    AA=t;DP=77      GT:GQ:DP        0|0:50:16       1|0:100:21      0|1:100:40
+14     45508462        .       A       G       .       PASS    AA=A;DP=90      GT:GQ:DP        0|0:50:16       1|0:100:21      0|1:100:54
+18     62343272        .       G       A       .       PASS    AA=A;DP=91      GT:GQ:DP        0|0:50:16       1|0:100:22      0|1:100:53
+1      177415362       rs12126360      T       C       .       PASS    AA=T;DP=108;HM2;HM3     GT:GQ:DP        0|0:50:16       1|0:100:22      0|1:100:69
+4      179238962       .       T       C       .       PASS    AA=T;DP=84      GT:GQ:DP        0|0:50:16       1|0:100:23      0|1:100:44
+1      76518994        rs12131613      C       T       .       PASS    AA=C;DP=114;HM2 GT:GQ:DP        0|0:50:16       1|0:100:23      0|1:100:69
+7      97007425        rs11977217      A       G       .       PASS    AA=A;DP=75      GT:GQ:DP        0|0:50:16       1|0:100:24      0|1:100:22
+12     109875305       .       A       G       .       PASS    AA=A;DP=87      GT:GQ:DP        0|0:50:16       1|0:100:24      0|1:100:47
+6      93323829        .       T       C       .       PASS    AA=T;DP=94      GT:GQ:DP        0|0:50:16       1|0:100:24      0|1:100:55
+2      147983694       .       A       G       .       PASS    AA=A;DP=99      GT:GQ:DP        0|0:50:16       1|0:100:26      0|1:100:56
+2      178201246       rs57271335      A       G       .       PASS    AA=A;DP=118     GT:GQ:DP        0|0:50:16       1|0:100:27      0|1:100:76
+7      10555648        .       C       T       .       PASS    AA=C;DP=107     GT:GQ:DP        0|0:50:16       1|0:100:28      0|1:100:62
+5      139564536       .       C       A       .       PASS    AA=C;DP=143     GT:GQ:DP        0|0:50:16       1|0:100:29      0|1:100:50
+9      81822212        rs12347159      C       T       .       PASS    AA=T;DP=97      GT:GQ:DP        0|0:50:16       1|0:100:29      0|1:100:53
+18     29663554        .       T       C       .       PASS    AA=T;DP=117     GT:GQ:DP        0|0:50:16       1|0:100:31      0|1:100:69
+X      32048522        .       A       G       .       PASS    AA=T;DP=131     GT:GQ:DP        0|0:50:16       1|0:100:34      0|1:100:42
+11     132736814       rs35246154      G       C       .       PASS    AA=G;DP=56      GT:GQ:DP        0|0:50:16       1|0:25:4        0|1:100:32
+4      94967655        .       T       G       .       PASS    AA=G;DP=63      GT:GQ:DP        0|0:50:16       1|0:42:8        0|1:100:32
+X      4051805 .       G       C       .       PASS    AA=.;DP=89      GT:GQ:DP        0|0:50:16       1|0:44:10       0|1:100:45
+16     1018062 .       G       A       .       PASS    AA=G;DP=69      GT:GQ:DP        0|0:50:16       1|0:44:7        0|1:100:46
+X      37825419        .       G       A       .       PASS    AA=G;DP=100     GT:GQ:DP        0|0:50:16       1|0:53:13       0|1:100:35
+5      132321442       rs59484796      C       T       .       PASS    AA=C;DP=87      GT:GQ:DP        0|0:50:16       1|0:53:8        0|1:100:60
+14     75045401        rs175705        C       G       .       PASS    AA=C;DP=89      GT:GQ:DP        0|0:50:16       1|0:59:18       0|1:100:59
+1      152662262       .       C       T       .       PASS    AA=C;DP=94      GT:GQ:DP        0|0:50:16       1|0:62:11       0|1:100:68
+3      71255982        .       T       A       .       PASS    AA=T;DP=63      GT:GQ:DP        0|0:50:16       1|0:65:14       0|1:82:24
+X      13567039        rs5935641       T       C       .       PASS    AA=T;DP=76      GT:GQ:DP        0|0:50:16       1|0:67:16       0|1:100:20
+11     128940912       .       G       T       .       PASS    AA=G;DP=76      GT:GQ:DP        0|0:50:16       1|0:73:15       0|1:100:43
+7      145976576       rs344481        T       G       .       PASS    AA=T;DP=78      GT:GQ:DP        0|0:50:16       1|0:74:15       0|1:100:48
+11     38073099        .       T       C       .       PASS    AA=T;DP=80      GT:GQ:DP        0|0:50:16       1|0:74:16       0|1:100:32
+5      149914299       .       G       T       .       PASS    AA=G;DP=75      GT:GQ:DP        0|0:50:16       1|0:74:19       0|1:100:29
+18     68666008        rs8097592       T       C       .       PASS    AA=T;DP=103     GT:GQ:DP        0|0:50:16       1|0:78:20       0|1:100:68
+1      225272262       .       A       G       .       PASS    AA=A;DP=91      GT:GQ:DP        0|0:50:16       1|0:79:12       0|1:100:64
+12     116971117       rs58958096      T       G       .       PASS    AA=t;DP=82      GT:GQ:DP        0|0:50:16       1|0:81:10       0|1:100:56
+20     12212016        rs34455144      G       A       .       PASS    AA=A;DP=91      GT:GQ:DP        0|0:50:16       1|0:82:17       0|1:100:57
+2      166714924       rs4319946       A       G       .       PASS    AA=A;DP=70      GT:GQ:DP        0|0:50:16       1|0:83:12       0|1:100:31
+12     33014271        .       T       C       .       PASS    AA=T;DP=85      GT:GQ:DP        0|0:50:16       1|0:83:15       0|1:100:53
+10     123536151       rs7922605       A       C       .       PASS    AA=A;DP=68      GT:GQ:DP        0|0:50:16       1|0:85:15       0|1:100:29
+13     62494861        rs56296344      G       C       .       PASS    AA=G;DP=79      GT:GQ:DP        0|0:50:16       1|0:85:15       0|1:100:48
+1      214986240       rs12070175      A       G       .       PASS    AA=G;DP=83;HM2;HM3      GT:GQ:DP        0|0:50:16       1|0:85:16       0|1:100:53
+10     31981811        rs12266029      G       C       .       PASS    AA=G;DP=62      GT:GQ:DP        0|0:50:16       1|0:88:12       0|1:100:26
+4      96230934        rs6822629       C       G       .       PASS    AA=G;DP=66      GT:GQ:DP        0|0:50:16       1|0:88:15       0|1:100:24
+15     81585470        .       G       A       .       PASS    AA=g;DP=101     GT:GQ:DP        0|0:50:16       1|0:94:14       0|1:100:70
+18     68535005        rs55889413      A       G       .       PASS    AA=A;DP=93      GT:GQ:DP        0|0:50:16       1|0:94:19       0|1:100:58
+8      43634396        rs7463316       A       C       .       PASS    AA=N;DP=80      GT:GQ:DP        0|0:50:16       1|0:96:16       0|1:100:49
+X      38037593        rs12834659      A       C       .       PASS    AA=a;DP=116     GT:GQ:DP        0|0:50:16       1|0:97:24       0|1:100:28
+8      121529319       .       G       T       .       PASS    AA=G;DP=115     GT:GQ:DP        0|0:50:16       1|0:99:16       0|1:100:87
+3      155591834       .       C       T       .       PASS    AA=C;DP=111     GT:GQ:DP        0|0:50:17       0|1:100:22      0|0:100:66
+4      180432738       rs10014219      A       G       .       PASS    AA=G;DP=86      GT:GQ:DP        0|0:50:17       1|0:100:14      0|1:100:58
+X      113095462       .       G       A       .       PASS    AA=A;DP=107     GT:GQ:DP        0|0:50:17       1|0:100:16      0|1:100:48
+1      80824402        .       A       G       .       PASS    AA=A;DP=81      GT:GQ:DP        0|0:50:17       1|0:100:17      0|1:100:40
+20     15133227        .       C       T       .       PASS    AA=C;DP=76      GT:GQ:DP        0|0:50:17       1|0:100:18      0|1:100:30
+1      70108909        rs7543437       T       G       .       PASS    AA=T;DP=91      GT:GQ:DP        0|0:50:17       1|0:100:18      0|1:100:56
+8      67416014        .       T       C       .       PASS    AA=T;DP=109     GT:GQ:DP        0|0:50:17       1|0:100:18      0|1:100:74
+6      135542466       rs6938173       G       C       .       PASS    AA=G;DP=95      GT:GQ:DP        0|0:50:17       1|0:100:20      0|1:100:58
+7      141797926       .       G       C       .       PASS    AA=G;DP=95      GT:GQ:DP        0|0:50:17       1|0:100:20      0|1:100:58
+16     53866761        rs2397442       G       A       .       PASS    AA=G;DP=108     GT:GQ:DP        0|0:50:17       1|0:100:20      0|1:100:68
+10     118794732       .       A       G       .       PASS    AA=A;DP=95      GT:GQ:DP        0|0:50:17       1|0:100:21      0|1:100:51
+21     16558876        .       T       A       .       PASS    AA=T;DP=98      GT:GQ:DP        0|0:50:17       1|0:100:22      0|1:100:59
+X      107747531       rs28531770      T       C       .       PASS    AA=T;DP=116     GT:GQ:DP        0|0:50:17       1|0:100:25      0|1:100:37
+12     126388850       rs11833435      A       G       .       PASS    AA=A;DP=97      GT:GQ:DP        0|0:50:17       1|0:100:26      0|1:100:57
+20     52963378        rs6098310       T       G       .       PASS    AA=T;DP=100     GT:GQ:DP        0|0:50:17       1|0:100:26      0|1:100:58
+1      81224336        rs12125632      A       G       .       PASS    AA=A;DP=113;HM2 GT:GQ:DP        0|0:50:17       1|0:100:26      0|1:100:69
+4      96437762        .       A       G       .       PASS    AA=A;DP=112     GT:GQ:DP        0|0:50:17       1|0:100:26      0|1:100:72
+5      176002610       rs13176195      G       A       .       PASS    AA=G;DP=60      GT:GQ:DP        0|0:50:17       1|0:45:9        0|1:100:34
+8      10669529        rs11250071      T       C       .       PASS    AA=T;DP=81      GT:GQ:DP        0|0:50:17       1|0:48:18       0|1:100:33
+19     54534118        rs59878462      G       C       .       PASS    AA=G;DP=75      GT:GQ:DP        0|0:50:17       1|0:55:10       0|1:100:49
+17     74532403        rs35115846      A       G       .       PASS    AA=G;DP=71      GT:GQ:DP        0|0:50:17       1|0:65:11       0|1:100:43
+3      100248185       .       T       C       .       PASS    AA=T;DP=138     GT:GQ:DP        0|0:50:17       1|0:75:14       0|1:100:42
+1      80704852        rs11163023      C       T       .       PASS    AA=C;DP=100;HM2 GT:GQ:DP        0|0:50:17       1|0:87:18       0|1:100:23
+3      15185615        rs1979585       A       G       .       PASS    AA=A;DP=99      GT:GQ:DP        0|0:50:17       1|0:89:16       0|1:100:64
+3      65336937        rs1564409       T       G       .       PASS    AA=T;DP=94      GT:GQ:DP        0|0:50:18       0|1:100:23      0|0:100:51
+4      131481585       .       C       G       .       PASS    AA=C;DP=85      GT:GQ:DP        0|0:50:18       1|0:100:14      0|1:100:54
+12     5751734 .       C       T       .       PASS    AA=C;DP=111     GT:GQ:DP        0|0:50:18       1|0:84:22       0|1:100:16
+8      17393975        rs2588190       T       C       .       PASS    AA=T;DP=98      GT:GQ:DP        0|0:50:19       1|0:83:19       0|1:82:60
+20     39618678        rs2272959       A       G       .       PASS    AA=A;DP=146     GT:GQ:DP        0|0:50:21       0|1:100:26      0|0:100:56
+3      126314557       .       G       C       .       PASS    AA=G;DP=112     GT:GQ:DP        0|0:50:22       0|1:100:15      0|0:100:77
+17     47296726        rs11867247      T       C       .       PASS    AA=T;DP=102     GT:GQ:DP        0|0:50:22       0|1:100:22      0|0:100:61
+6      130862041       .       G       T       .       PASS    AA=G;DP=100     GT:GQ:DP        0|0:50:22       0|1:100:23      0|0:100:55
+12     7410752 rs10844995      T       G       .       PASS    AA=T;DP=82      GT:GQ:DP        0|0:50:22       1|0:100:18      0|1:100:31
+1      219272483       rs11118634      C       A       .       PASS    AA=C;DP=90      GT:GQ:DP        0|0:50:22       1|0:100:18      0|1:100:50
+4      60545531        rs28884207      C       T       .       PASS    AA=C;DP=76      GT:GQ:DP        0|0:50:22       1|0:24:13       0|1:100:41
+5      28015364        .       G       A       .       PASS    AA=G;DP=100     GT:GQ:DP        0|0:50:22       1|0:84:16       0|1:100:50
+4      31159699        .       G       A       .       PASS    AA=G;DP=110     GT:GQ:DP        0|0:50:23       0|1:100:20      0|0:100:66
+2      199298152       rs10209619      T       C       .       PASS    AA=T;DP=149     GT:GQ:DP        0|0:50:23       0|1:100:22      0|0:100:46
+17     51906889        .       G       T       .       PASS    AA=G;DP=123     GT:GQ:DP        0|0:50:23       0|1:100:23      0|0:100:77
+9      100462503       .       C       T       .       PASS    AA=C;DP=105     GT:GQ:DP        0|0:50:23       0|1:100:26      0|0:100:54
+9      16931053        .       C       G       .       PASS    AA=C;DP=118     GT:GQ:DP        0|0:50:23       0|1:100:28      0|0:100:67
+11     65195140        rs12270492      G       A       .       PASS    AA=G;DP=135     GT:GQ:DP        0|0:50:23       0|1:100:36      0|0:99:33
+1      72761813        rs2422252       C       T       .       PASS    AA=C;DP=101     GT:GQ:DP        0|0:50:24       0|1:100:16      0|0:100:62
+13     70425933        rs9572586       T       A       .       PASS    AA=C;DP=93      GT:GQ:DP        0|0:50:24       1|1:43:18       0|1:100:51
+2      213559032       rs12613560      T       C       .       PASS    AA=T;DP=127     GT:GQ:DP        0|0:50:24       1|1:76:28       0|1:100:78
+2      230812303       rs6436924       T       A       .       PASS    AA=T;DP=124     GT:GQ:DP        0|0:50:25       0|1:100:27      0|0:100:72
+2      177181568       rs1448520       A       G       .       PASS    AA=A;DP=113     GT:GQ:DP        0|0:50:28       1|1:31:23       0|1:100:65
+4      11364813        .       G       A       .       PASS    AA=G;DP=123     GT:GQ:DP        0|0:50:28       1|1:55:21       0|1:100:33
+11     19052967        .       C       A       .       PASS    AA=C;DP=134     GT:GQ:DP        0|0:50:30       0|1:100:24      0|0:100:80
+17     58188859        .       C       A       .       PASS    AA=C;DP=130     GT:GQ:DP        0|0:50:32       0|1:100:23      0|0:100:76
+5      893340  rs3822812       C       G       .       PASS    AA=N;DP=101     GT:GQ:DP        0|0:50:35       1|0:100:15      0|1:100:50
+12     105861613       rs57361179      T       C       .       PASS    AA=T;DP=85      GT:GQ:DP        0|0:51:17       1|1:11:11       0|1:100:57
+11     93157534        rs2848477       G       C       .       PASS    AA=C;DP=67      GT:GQ:DP        0|0:51:17       1|1:13:6        0|1:100:37
+13     63074858        rs1826270       G       A       .       PASS    AA=A;DP=97      GT:GQ:DP        0|0:51:17       1|1:16:7        0|1:100:61
+2      116329967       rs272061        T       G       .       PASS    AA=T;DP=83      GT:GQ:DP        0|0:51:17       1|1:19:15       0|1:100:54
+8      138857665       rs6577831       A       G       .       PASS    AA=A;DP=73      GT:GQ:DP        0|0:51:17       1|1:28:11       0|1:100:32
+1      55901043        .       T       A       .       PASS    AA=t;DP=81      GT:GQ:DP        0|0:51:17       1|1:28:22       0|1:100:31
+4      121495619       rs9307486       T       A       .       PASS    AA=A;DP=70      GT:GQ:DP        0|0:51:17       1|1:31:13       0|1:100:25
+1      236488242       rs4998510       G       A       .       PASS    AA=A;DP=68      GT:GQ:DP        0|0:51:17       1|1:34:13       0|1:100:38
+X      88305908        rs5941146       A       G       .       PASS    AA=N;DP=98      GT:GQ:DP        0|0:51:17       1|1:37:14       0|1:100:35
+12     72597868        rs17112843      C       T       .       PASS    AA=T;DP=76      GT:GQ:DP        0|0:51:17       1|1:37:14       0|1:100:44
+3      107618721       rs4894850       T       C       .       PASS    AA=T;DP=88      GT:GQ:DP        0|0:51:17       1|1:37:14       0|1:100:61
+4      95841485        rs6820812       A       C       .       PASS    AA=C;DP=74      GT:GQ:DP        0|0:51:17       1|1:40:15       0|1:100:39
+3      105990298       rs7653166       G       A       .       PASS    AA=G;DP=96      GT:GQ:DP        0|0:51:17       1|1:40:16       0|1:100:59
+X      112902642       rs2905258       C       T       .       PASS    AA=T;DP=87      GT:GQ:DP        0|0:51:17       1|1:43:16       0|1:100:32
+2      215133558       .       G       T       .       PASS    AA=G;DP=67      GT:GQ:DP        0|0:51:17       1|1:43:16       0|1:100:36
+4      137157397       rs12331327      G       A       .       PASS    AA=A;DP=99      GT:GQ:DP        0|0:51:17       1|1:43:16       0|1:100:68
+X      25832603        rs11796111      G       T       .       PASS    AA=G;DP=97      GT:GQ:DP        0|0:51:17       1|1:46:17       0|1:100:22
+18     65097426        rs10083986      C       T       .       PASS    AA=C;DP=104     GT:GQ:DP        0|0:51:17       1|1:46:17       0|1:100:69
+5      31047208        .       C       T       .       PASS    AA=C;DP=84      GT:GQ:DP        0|0:51:17       1|1:49:18       0|1:100:49
+X      147823891       rs12116348      A       C       .       PASS    AA=A;DP=146     GT:GQ:DP        0|0:51:17       1|1:50:29       0|1:100:51
+7      84594966        rs2159576       C       T       .       PASS    AA=C;DP=92      GT:GQ:DP        0|0:51:17       1|1:52:19       0|1:100:52
+13     53319335        rs7332511       C       G       .       PASS    AA=C;DP=93      GT:GQ:DP        0|0:51:17       1|1:55:20       0|1:100:55
+5      58332613        rs10940638      G       A       .       PASS    AA=G;DP=107     GT:GQ:DP        0|0:51:17       1|1:55:20       0|1:100:65
+7      65510117        rs1643374       T       A       .       PASS    AA=a;DP=87      GT:GQ:DP        0|0:51:17       1|1:67:24       0|1:100:46
+X      46092190        rs6611210       C       G       .       PASS    AA=C;DP=123     GT:GQ:DP        0|0:51:17       1|1:79:30       0|1:100:41
+8      63528554        rs979253        T       A       .       PASS    AA=A;DP=100     GT:GQ:DP        0|0:51:17       1|1:9:15        0|1:100:64
+9      138371301       rs3923827       C       T       .       PASS    AA=C;DP=97      GT:GQ:DP        0|0:51:18       1|1:22:10       0|1:100:69
+14     40000113        rs57207044      C       T       .       PASS    AA=c;DP=84      GT:GQ:DP        0|0:51:18       1|1:61:23       0|1:100:43
+10     8417569 rs12355776      A       T       .       PASS    AA=A;DP=106     GT:GQ:DP        0|0:51:18       1|1:88:32       0|1:100:54
+7      80647261        rs7794595       G       A       .       PASS    AA=A;DP=133     GT:GQ:DP        0|0:51:18       1|1:88:34       0|1:100:76
+6      4928401 .       G       A       .       PASS    AA=G;DP=94      GT:GQ:DP        0|0:51:19       0|1:100:25      0|0:100:51
+2      180599035       .       A       G       .       PASS    AA=A;DP=71      GT:GQ:DP        0|0:51:21       0|1:100:14      0|0:72:24
+8      122446072       rs35426682      G       A       .       PASS    AA=G;DP=107     GT:GQ:DP        0|0:51:21       0|1:100:25      0|0:100:63
+6      41807360        rs58132765      C       A       .       PASS    AA=C;DP=121     GT:GQ:DP        0|0:51:22       1|0:94:19       0|1:100:82
+2      226642252       rs16866804      G       A       .       PASS    AA=G;DP=89      GT:GQ:DP        0|0:51:23       0|1:100:21      0|0:100:46
+2      80652283        rs6710710       C       T       .       PASS    AA=c;DP=100     GT:GQ:DP        0|0:51:23       1|0:100:18      0|1:100:58
+9      107729344       rs10978344      A       T       .       PASS    AA=A;DP=106     GT:GQ:DP        0|0:51:23       1|0:100:21      0|1:100:62
+1      245209982       rs12750902      T       C       .       PASS    AA=T;DP=64      GT:GQ:DP        0|0:51:23       1|0:35:10       0|1:100:27
+4      71759968        rs16845361      G       A       .       PASS    AA=g;DP=97      GT:GQ:DP        0|0:51:23       1|0:49:15       0|1:100:61
+20     55793755        rs6099748       C       T       .       PASS    AA=C;DP=97      GT:GQ:DP        0|0:51:23       1|0:90:12       0|1:100:63
+19     21269271        rs1781873       T       C       .       PASS    AA=T;DP=110     GT:GQ:DP        0|0:51:23       1|0:91:19       0|1:100:71
+8      95860636        rs34759911      C       A       .       PASS    AA=C;DP=72      GT:GQ:DP        0|0:51:23       1|1:25:10       0|1:100:27
+6      86845635        .       T       G       .       PASS    AA=T;DP=103     GT:GQ:DP        0|0:51:24       0|1:100:27      0|0:100:52
+1      107133286       rs17017718      G       A       .       PASS    AA=G;DP=106     GT:GQ:DP        0|0:51:24       1|0:100:22      0|1:100:58
+2      81700365        rs17020570      A       T       .       PASS    AA=A;DP=102     GT:GQ:DP        0|0:51:25       0|1:100:19      0|0:100:60
+8      42137438        .       A       T       .       PASS    AA=A;DP=111     GT:GQ:DP        0|0:51:25       0|1:100:25      0|0:100:60
+3      141530526       rs7630996       C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        0|0:51:25       1|0:100:20      0|1:100:64
+3      77795287        .       T       G       .       PASS    AA=T;DP=121     GT:GQ:DP        0|0:51:26       0|1:100:18      0|0:100:76
+10     13741683        .       A       C       .       PASS    AA=C;DP=95      GT:GQ:DP        0|0:51:27       0|1:100:13      0|0:100:55
+13     89736516        rs7994335       A       G       .       PASS    AA=A;DP=83      GT:GQ:DP        0|0:51:27       1|0:100:19      0|1:100:40
+20     57967139        rs6071043       T       G       .       PASS    AA=G;DP=117     GT:GQ:DP        0|0:51:27       1|0:100:21      0|1:100:72
+3      61760624        rs17065413      A       C       .       PASS    AA=A;DP=140     GT:GQ:DP        0|0:51:27       1|0:100:27      0|1:100:82
+15     42222555        rs2615271       T       C       .       PASS    AA=C;DP=98      GT:GQ:DP        0|0:51:27       1|0:65:10       0|1:100:61
+12     98123439        rs1492246       C       T       .       PASS    AA=c;DP=111     GT:GQ:DP        0|0:51:28       0|1:100:24      0|0:100:59
+5      24926885        rs12519154      A       T       .       PASS    AA=A;DP=124     GT:GQ:DP        0|0:51:31       1|1:58:21       0|1:100:74
+2      201041246       rs3769433       T       C       .       PASS    AA=T;DP=148     GT:GQ:DP        0|0:51:32       1|0:100:19      0|1:100:54
+1      186761822       rs28640155      T       C       .       PASS    AA=T;DP=79      GT:GQ:DP        0|0:52:17       1|0:5:19        0|1:100:44
+11     2378107 rs16928242      T       C       .       PASS    AA=T;DP=128     GT:GQ:DP        0|0:52:20       1|0:8:9 0|1:100:80
+16     28197561        rs7199779       G       A       .       PASS    AA=G;DP=100     GT:GQ:DP        0|0:52:22       0|1:100:19      0|0:100:59
+2      249221  .       G       A       .       PASS    AA=G;DP=89      GT:GQ:DP        0|0:52:22       1|0:46:12       0|1:100:58
+14     40231870        .       A       G       .       PASS    AA=A;DP=131     GT:GQ:DP        0|0:52:23       0|1:100:26      0|0:100:37
+2      227269982       rs12185691      T       C       .       PASS    AA=T;DP=112     GT:GQ:DP        0|0:52:23       0|1:100:28      0|0:100:61
+5      148080186       rs13188076      G       T       .       PASS    AA=G;DP=133     GT:GQ:DP        0|0:52:23       0|1:100:29      0|0:100:72
+4      6781800 rs59835527      T       C       .       PASS    AA=T;DP=89      GT:GQ:DP        0|0:52:23       1|1:19:10       0|1:100:55
+2      67601711        rs6734525       C       T       .       PASS    AA=C;DP=97      GT:GQ:DP        0|0:52:24       1|0:100:15      0|1:100:56
+3      16885247        rs7619463       A       G       .       PASS    AA=A;DP=92      GT:GQ:DP        0|0:52:24       1|0:15:17       0|1:100:41
+10     16665453        .       G       T       .       PASS    AA=G;DP=87      GT:GQ:DP        0|0:52:24       1|0:76:14       0|1:100:51
+1      179013924       rs10914102      T       G       .       PASS    AA=G;DP=93      GT:GQ:DP        0|0:52:25       1|1:16:18       0|1:100:41
+10     30842852        .       C       T       .       PASS    AA=C;DP=106     GT:GQ:DP        0|0:52:26       0|1:100:22      0|0:100:58
+8      113238126       .       A       C       .       PASS    AA=A;DP=103     GT:GQ:DP        0|0:52:26       0|1:100:23      0|0:100:56
+22     45188640        .       G       A       .       PASS    AA=G;DP=149     GT:GQ:DP        0|0:52:26       0|1:100:31      0|0:100:39
+18     4867636 .       T       C       .       PASS    AA=T;DP=107     GT:GQ:DP        0|0:52:26       1|0:75:27       0|1:100:54
+7      133893032       .       C       T       .       PASS    AA=c;DP=104     GT:GQ:DP        0|0:52:26       1|1:49:18       0|1:100:61
+3      75039333        .       G       A       .       PASS    AA=G;DP=106     GT:GQ:DP        0|0:52:27       0|1:100:13      0|0:100:68
+6      1286158 rs12110825      A       G       .       PASS    AA=G;DP=105     GT:GQ:DP        0|0:52:27       0|1:100:16      0|0:100:62
+13     43892898        .       T       G       .       PASS    AA=T;DP=125     GT:GQ:DP        0|0:52:27       0|1:100:16      0|0:100:83
+6      46611725        rs1527699       T       C       .       PASS    AA=T;DP=97      GT:GQ:DP        0|0:52:27       0|1:100:17      0|0:100:51
+8      49718996        rs33997479      T       G       .       PASS    AA=T;DP=111     GT:GQ:DP        0|0:52:27       0|1:100:18      0|0:100:71
+11     109444665       rs12292016      A       G       .       PASS    AA=G;DP=123     GT:GQ:DP        0|0:52:27       0|1:100:20      0|0:100:75
+12     107261020       rs1399828       T       A       .       PASS    AA=t;DP=143     GT:GQ:DP        0|0:52:27       0|1:100:20      0|0:100:93
+13     85416168        rs9575991       A       G       .       PASS    AA=A;DP=98      GT:GQ:DP        0|0:52:27       0|1:100:23      0|0:100:48
+3      68155643        .       G       T       .       PASS    AA=G;DP=108     GT:GQ:DP        0|0:52:27       0|1:100:23      0|0:100:57
+1      110727983       rs2018431       C       G       .       PASS    AA=G;DP=115     GT:GQ:DP        0|0:52:27       0|1:100:25      0|0:100:67
+2      6200040 rs12328780      T       G       .       PASS    AA=g;DP=140     GT:GQ:DP        0|0:52:27       0|1:100:27      0|0:100:36
+3      118857913       rs4688100       C       T       .       PASS    AA=C;DP=126     GT:GQ:DP        0|0:52:27       0|1:100:29      0|0:100:71
+12     128563235       rs1484009       T       C       .       PASS    AA=T;DP=128     GT:GQ:DP        0|0:52:27       0|1:100:29      0|0:100:75
+5      66190182        .       T       C       .       PASS    AA=T;DP=123     GT:GQ:DP        0|0:52:27       0|1:100:30      0|0:100:71
+8      123611661       rs6999166       G       A       .       PASS    AA=G;DP=146     GT:GQ:DP        0|0:52:27       0|1:100:31      0|0:100:87
+1      192285280       .       G       T       .       PASS    AA=G;DP=114     GT:GQ:DP        0|0:52:28       1|0:100:16      0|1:100:75
+11     22575342        rs12796724      C       A       .       PASS    AA=C;DP=100     GT:GQ:DP        0|0:52:28       1|0:100:21      0|1:100:51
+20     53615282        rs6092143       C       T       .       PASS    AA=T;DP=121     GT:GQ:DP        0|0:52:28       1|0:100:22      0|1:100:74
+4      118656754       rs1352575       C       A       .       PASS    AA=A;DP=95      GT:GQ:DP        0|0:52:28       1|0:100:23      0|1:100:34
+10     116409762       .       T       C       .       PASS    AA=T;DP=124     GT:GQ:DP        0|0:52:28       1|0:100:25      0|1:100:71
+9      7752216 rs6477230       G       A       .       PASS    AA=A;DP=103     GT:GQ:DP        0|0:52:28       1|0:100:27      0|1:100:50
+20     17033714        rs1417564       C       A       .       PASS    AA=C;DP=136     GT:GQ:DP        0|0:52:28       1|0:100:30      0|1:100:77
+4      25404529        .       G       T       .       PASS    AA=G;DP=149     GT:GQ:DP        0|0:52:28       1|0:100:37      0|1:100:85
+2      233975493       rs28444082      G       A       .       PASS    AA=G;DP=101     GT:GQ:DP        0|0:52:28       1|0:11:11       0|1:100:62
+12     107917103       .       G       A       .       PASS    AA=G;DP=110     GT:GQ:DP        0|0:52:28       1|0:31:21       0|1:100:51
+7      116921870       rs4148687       G       A       .       PASS    AA=G;DP=124     GT:GQ:DP        0|0:52:28       1|0:42:28       0|1:100:71
+11     1369012 rs61867609      A       G       .       PASS    AA=.;DP=110     GT:GQ:DP        0|0:52:28       1|0:58:9        0|1:100:71
+8      141502403       rs7822256       T       G       .       PASS    AA=T;DP=124     GT:GQ:DP        0|0:52:28       1|0:69:23       0|1:100:76
+16     1119032 rs12928460      G       T       .       PASS    AA=T;DP=123     GT:GQ:DP        0|0:52:28       1|0:79:14       0|1:100:78
+12     102706987       rs4964820       G       A       .       PASS    AA=A;DP=109     GT:GQ:DP        0|0:52:28       1|0:87:23       0|1:100:57
+6      54280024        .       T       G       .       PASS    AA=T;DP=154     GT:GQ:DP        0|0:52:30       1|0:54:28       0|1:100:59
+17     44947200        rs11466173      G       C       .       PASS    AA=G;DP=108     GT:GQ:DP        0|0:52:31       0|1:100:14      0|0:100:64
+13     20604302        .       G       T       .       PASS    AA=G;DP=80      GT:GQ:DP        0|0:52:32       1|0:56:6        0|1:100:34
+3      38177589        .       T       C       .       PASS    AA=-;DP=47      GT:GQ:DP        0|0:53:16       0|1:100:11      0|0:66:22
+6      98246247        rs4620129       A       G       .       PASS    AA=G;DP=81      GT:GQ:DP        0|0:53:16       0|1:100:12      0|0:100:54
+15     45677521        rs12439029      T       C       .       PASS    AA=C;DP=67      GT:GQ:DP        0|0:53:16       0|1:100:13      0|0:100:38
+7      118429083       rs10270913      G       A       .       PASS    AA=G;DP=70      GT:GQ:DP        0|0:53:16       0|1:100:13      0|0:100:40
+1      98792292        .       C       A       .       PASS    AA=C;DP=63      GT:GQ:DP        0|0:53:16       0|1:100:13      0|0:40:24
+6      66562220        rs2802042       G       A       .       PASS    AA=A;DP=79      GT:GQ:DP        0|0:53:16       0|1:100:14      0|0:100:48
+12     83787968        .       C       T       .       PASS    AA=C;DP=88      GT:GQ:DP        0|0:53:16       0|1:100:14      0|0:100:58
+12     21702222        .       G       A       .       PASS    AA=G;DP=92      GT:GQ:DP        0|0:53:16       0|1:100:14      0|0:100:63
+4      95455457        .       G       A       .       PASS    AA=G;DP=100     GT:GQ:DP        0|0:53:16       0|1:100:14      0|0:100:70
+16     10501494        rs9921262       G       C       .       PASS    AA=C;DP=61      GT:GQ:DP        0|0:53:16       0|1:100:14      0|0:96:32
+4      105409226       rs17034404      A       G       .       PASS    AA=A;DP=81      GT:GQ:DP        0|0:53:16       0|1:100:15      0|0:100:50
+4      155323619       .       C       T       .       PASS    AA=C;DP=98      GT:GQ:DP        0|0:53:16       0|1:100:15      0|0:100:68
+X      6244965 rs1378390       T       C       .       PASS    AA=.;DP=79      GT:GQ:DP        0|0:53:16       0|1:100:15      0|0:99:33
+5      58759883        .       G       A       .       PASS    AA=G;DP=68      GT:GQ:DP        0|0:53:16       0|1:100:16      0|0:100:38
+7      55598413        rs7791086       C       T       .       PASS    AA=C;DP=73      GT:GQ:DP        0|0:53:16       0|1:100:16      0|0:100:40
+9      7932881 .       T       A       .       PASS    AA=T;DP=78      GT:GQ:DP        0|0:53:16       0|1:100:16      0|0:100:44
+2      190743983       rs785207        C       T       .       PASS    AA=T;DP=97      GT:GQ:DP        0|0:53:16       0|1:100:16      0|0:100:48
+14     79651422        rs61991176      T       A       .       PASS    AA=T;DP=89      GT:GQ:DP        0|0:53:16       0|1:100:16      0|0:100:58
+2      141789255       .       A       T       .       PASS    AA=A;DP=90      GT:GQ:DP        0|0:53:16       0|1:100:16      0|0:100:58
+4      28671598        rs28470320      C       T       .       PASS    AA=T;DP=89      GT:GQ:DP        0|0:53:16       0|1:100:16      0|0:100:63
+4      164340776       rs10517778      A       G       .       PASS    AA=A;DP=96      GT:GQ:DP        0|0:53:16       0|1:100:16      0|0:100:65
+4      162173179       rs17301015      T       C       .       PASS    AA=T;DP=99      GT:GQ:DP        0|0:53:16       0|1:100:16      0|0:100:68
+2      52236836        rs4270386       C       T       .       PASS    AA=C;DP=75      GT:GQ:DP        0|0:53:16       0|1:100:16      0|0:93:31
+8      4136182 rs28585544      A       G       .       PASS    AA=A;DP=77      GT:GQ:DP        0|0:53:16       0|1:100:17      0|0:100:37
+X      19130651        rs2034924       G       C       .       PASS    AA=t;DP=119     GT:GQ:DP        0|0:53:16       0|1:100:17      0|0:100:43
+11     123552155       rs60954028      T       G       .       PASS    AA=T;DP=79      GT:GQ:DP        0|0:53:16       0|1:100:17      0|0:100:49
+11     7082346 .       T       A       .       PASS    AA=T;DP=88      GT:GQ:DP        0|0:53:16       0|1:100:17      0|0:100:56
+12     15599517        rs10846208      A       G       .       PASS    AA=A;DP=111     GT:GQ:DP        0|0:53:16       0|1:100:17      0|0:100:82
+X      18702762        rs2283719       A       G       .       PASS    AA=A;DP=103     GT:GQ:DP        0|0:53:16       0|1:100:17      0|0:96:32
+10     132442982       rs7896101       A       G       .       PASS    AA=G;DP=81      GT:GQ:DP        0|0:53:16       0|1:100:18      0|0:100:46
+5      27231954        .       C       T       .       PASS    AA=C;DP=81      GT:GQ:DP        0|0:53:16       0|1:100:18      0|0:100:46
+1      63005379        .       A       G       .       PASS    AA=A;DP=88      GT:GQ:DP        0|0:53:16       0|1:100:18      0|0:100:55
+12     60126164        rs1453699       A       T       .       PASS    AA=a;DP=59      GT:GQ:DP        0|0:53:16       0|1:100:18      0|0:60:20
+3      77035014        .       A       G       .       PASS    AA=A;DP=75      GT:GQ:DP        0|0:53:16       0|1:100:19      0|0:100:41
+7      82513611        .       G       A       .       PASS    AA=G;DP=82      GT:GQ:DP        0|0:53:16       0|1:100:19      0|0:100:49
+3      162659845       .       G       A       .       PASS    AA=A;DP=97      GT:GQ:DP        0|0:53:16       0|1:100:19      0|0:100:61
+16     82352487        rs889406        G       A       .       PASS    AA=A;DP=104     GT:GQ:DP        0|0:53:16       0|1:100:19      0|0:100:68
+8      88273533        rs2915519       T       C       .       PASS    AA=T;DP=84      GT:GQ:DP        0|0:53:16       0|1:100:19      0|0:96:32
+3      148105199       rs7632942       T       C       .       PASS    AA=T;DP=92      GT:GQ:DP        0|0:53:16       0|1:100:20      0|0:100:56
+3      168419744       .       A       G       .       PASS    AA=A;DP=96      GT:GQ:DP        0|0:53:16       0|1:100:20      0|0:100:62
+17     65882355        .       C       T       .       PASS    AA=C;DP=97      GT:GQ:DP        0|0:53:16       0|1:100:20      0|0:100:65
+12     87848184        .       A       G       .       PASS    AA=A;DP=106     GT:GQ:DP        0|0:53:16       0|1:100:20      0|0:100:72
+4      176117680       .       G       A       .       PASS    AA=G;DP=78      GT:GQ:DP        0|0:53:16       0|1:100:20      0|0:87:29
+X      68017101        .       G       A       .       PASS    AA=A;DP=98      GT:GQ:DP        0|0:53:16       0|1:100:21      0|0:100:39
+13     93493123        rs11843004      T       C       .       PASS    AA=T;DP=82      GT:GQ:DP        0|0:53:16       0|1:100:21      0|0:100:46
+4      112242988       .       A       T       .       PASS    AA=A;DP=90      GT:GQ:DP        0|0:53:16       0|1:100:21      0|0:100:52
+12     29145012        rs10843319      T       G       .       PASS    AA=T;DP=94      GT:GQ:DP        0|0:53:16       0|1:100:21      0|0:100:55
+12     87733768        rs406393        T       C       .       PASS    AA=t;DP=94      GT:GQ:DP        0|0:53:16       0|1:100:21      0|0:100:58
+4      44123581        rs12499682      G       A       .       PASS    AA=G;DP=97      GT:GQ:DP        0|0:53:16       0|1:100:21      0|0:100:61
+X      151737388       .       C       T       .       PASS    AA=C;DP=100     GT:GQ:DP        0|0:53:16       0|1:100:21      0|0:99:33
+8      87889431        rs10097817      A       G       .       PASS    AA=A;DP=87      GT:GQ:DP        0|0:53:16       0|1:100:22      0|0:100:49
+4      61956380        rs7654021       C       G       .       PASS    AA=a;DP=108     GT:GQ:DP        0|0:53:16       0|1:100:22      0|0:90:32
+3      14108899        .       G       C       .       PASS    AA=G;DP=103     GT:GQ:DP        0|0:53:16       0|1:100:23      0|0:100:48
+4      13416572        rs10939513      A       G       .       PASS    AA=A;DP=94      GT:GQ:DP        0|0:53:16       0|1:100:23      0|0:100:55
+X      95528952        rs1890287       C       A       .       PASS    AA=C;DP=112     GT:GQ:DP        0|0:53:16       0|1:100:24      0|0:88:37
+21     40603541        rs718599        A       G       .       PASS    AA=A;DP=117     GT:GQ:DP        0|0:53:16       0|1:100:27      0|0:100:74
+1      167745655       .       A       G       .       PASS    AA=A;DP=83      GT:GQ:DP        0|0:53:16       0|1:100:27      0|0:73:27
+8      51401176        .       G       T       .       PASS    AA=G;DP=104     GT:GQ:DP        0|0:53:16       0|1:100:28      0|0:100:56
+X      42923548        .       A       G       .       PASS    AA=A;DP=106     GT:GQ:DP        0|0:53:16       0|1:100:28      0|0:93:31
+10     83008694        rs7072513       G       T       .       PASS    AA=G;DP=137     GT:GQ:DP        0|0:53:16       0|1:100:32      0|0:100:43
+X      14544787        rs5935785       G       A       .       PASS    AA=G;DP=112     GT:GQ:DP        0|0:53:16       0|1:100:32      0|0:93:31
+X      78548592        rs5912932       C       G       .       PASS    AA=C;DP=136     GT:GQ:DP        0|0:53:16       0|1:100:34      0|0:100:39
+X      15354964        rs234498        C       T       .       PASS    AA=C;DP=130     GT:GQ:DP        0|0:53:16       0|1:100:43      0|0:100:37
+6      4214703 .       C       G       .       PASS    AA=C;DP=96      GT:GQ:DP        0|0:53:16       0|1:77:12       0|0:69:31
+8      84480685        rs35749520      T       C       .       PASS    AA=C;DP=81      GT:GQ:DP        0|0:53:17       0|1:100:15      0|0:100:46
+3      15918626        .       C       A       .       PASS    AA=C;DP=90      GT:GQ:DP        0|0:53:17       0|1:100:15      0|0:100:54
+1      158270581       .       A       G       .       PASS    AA=A;DP=104     GT:GQ:DP        0|0:53:17       0|1:100:15      0|0:100:70
+4      101248318       rs6846880       G       A       .       PASS    AA=G;DP=88      GT:GQ:DP        0|0:53:17       0|1:100:18      0|0:100:52
+9      23156288        .       A       G       .       PASS    AA=A;DP=83      GT:GQ:DP        0|0:53:17       0|1:100:19      0|0:100:48
+16     8009606 rs9924591       G       A       .       PASS    AA=G;DP=93      GT:GQ:DP        0|0:53:17       0|1:100:22      0|0:100:54
+6      114456692       rs4311539       C       G       .       PASS    AA=C;DP=92      GT:GQ:DP        0|0:53:17       0|1:100:22      0|0:100:56
+11     115821987       rs489164        T       C       .       PASS    AA=T;DP=121     GT:GQ:DP        0|0:53:17       0|1:100:23      0|0:100:81
+14     36768538        rs12882311      T       C       .       PASS    AA=T;DP=103     GT:GQ:DP        0|0:53:17       0|1:100:25      0|0:100:61
+4      34684757        .       C       G       .       PASS    AA=c;DP=74      GT:GQ:DP        0|0:53:17       0|1:100:25      0|0:75:25
+X      129673512       .       C       T       .       PASS    AA=C;DP=107     GT:GQ:DP        0|0:53:17       0|1:100:26      0|0:100:38
+5      174338636       rs59705593      C       T       .       PASS    AA=C;DP=135     GT:GQ:DP        0|0:53:17       0|1:100:27      0|0:100:86
+8      84857230        rs34915638      G       A       .       PASS    AA=G;DP=90      GT:GQ:DP        0|0:53:17       0|1:100:29      0|0:100:43
+4      75828912        rs61369662      A       G       .       PASS    AA=A;DP=108     GT:GQ:DP        0|0:53:17       0|1:100:30      0|0:100:58
+X      38888457        .       A       G       .       PASS    AA=A;DP=105     GT:GQ:DP        0|0:53:17       0|1:100:30      0|0:78:26
+17     69267520        rs60786453      C       T       .       PASS    AA=C;DP=105     GT:GQ:DP        0|0:53:17       1|0:100:13      0|1:100:75
+3      159344605       rs9884071       A       G       .       PASS    AA=A;DP=75      GT:GQ:DP        0|0:53:17       1|0:100:15      0|1:100:32
+9      11645353        .       G       A       .       PASS    AA=G;DP=69      GT:GQ:DP        0|0:53:17       1|0:100:16      0|1:100:37
+3      165614329       .       T       G       .       PASS    AA=T;DP=86      GT:GQ:DP        0|0:53:17       1|0:100:16      0|1:100:38
+4      29977682        .       G       A       .       PASS    AA=G;DP=73      GT:GQ:DP        0|0:53:17       1|0:100:16      0|1:100:40
+10     58196301        rs1925307       G       A       .       PASS    AA=a;DP=78      GT:GQ:DP        0|0:53:17       1|0:100:16      0|1:100:46
+X      9668661 .       C       G       .       PASS    AA=G;DP=98      GT:GQ:DP        0|0:53:17       1|0:100:17      0|1:100:31
+15     93419195        rs17554431      A       G       .       PASS    AA=A;DP=127     GT:GQ:DP        0|0:53:17       1|0:100:17      0|1:100:47
+9      1702817 rs7038246       A       G       .       PASS    AA=A;DP=86      GT:GQ:DP        0|0:53:17       1|0:100:17      0|1:100:54
+X      150689593       .       G       A       .       PASS    AA=G;DP=81      GT:GQ:DP        0|0:53:17       1|0:100:18      0|1:100:23
+18     26264056        rs1561910       G       A       .       PASS    AA=G;DP=84      GT:GQ:DP        0|0:53:17       1|0:100:18      0|1:100:50
+3      1194050 .       A       G       .       PASS    AA=A;DP=88      GT:GQ:DP        0|0:53:17       1|0:100:18      0|1:100:52
+9      119633943       rs10983811      G       A       .       PASS    AA=g;DP=89      GT:GQ:DP        0|0:53:17       1|0:100:18      0|1:100:56
+2      215201829       rs5019644       G       T       .       PASS    AA=G;DP=102     GT:GQ:DP        0|0:53:17       1|0:100:18      0|1:100:68
+X      139723176       rs2316635       T       A       .       PASS    AA=.;DP=78      GT:GQ:DP        0|0:53:17       1|0:100:19      0|1:100:18
+1      190272495       .       T       A       .       PASS    AA=T;DP=76      GT:GQ:DP        0|0:53:17       1|0:100:19      0|1:100:34
+2      123819314       .       T       A       .       PASS    AA=t;DP=88      GT:GQ:DP        0|0:53:17       1|0:100:19      0|1:100:49
+3      18716806        rs11708026      A       G       .       PASS    AA=A;DP=84      GT:GQ:DP        0|0:53:17       1|0:100:20      0|1:100:46
+5      50986698        rs1345789       C       T       .       PASS    AA=T;DP=83      GT:GQ:DP        0|0:53:17       1|0:100:20      0|1:100:46
+6      92974099        rs7739553       A       C       .       PASS    AA=A;DP=86      GT:GQ:DP        0|0:53:17       1|0:100:20      0|1:100:49
+12     100956308       .       A       T       .       PASS    AA=A;DP=89      GT:GQ:DP        0|0:53:17       1|0:100:20      0|1:100:54
+10     122061155       .       G       A       .       PASS    AA=G;DP=100     GT:GQ:DP        0|0:53:17       1|0:100:20      0|1:100:62
+14     30354792        .       G       A       .       PASS    AA=G;DP=87      GT:GQ:DP        0|0:53:17       1|0:100:21      0|1:100:50
+4      139543919       .       T       C       .       PASS    AA=T;DP=88      GT:GQ:DP        0|0:53:17       1|0:100:21      0|1:100:52
+4      29272833        rs61550520      G       C       .       PASS    AA=G;DP=103     GT:GQ:DP        0|0:53:17       1|0:100:21      0|1:100:66
+4      160704355       rs56336757      C       T       .       PASS    AA=C;DP=97      GT:GQ:DP        0|0:53:17       1|0:100:22      0|1:100:57
+X      148509980       rs60329822      A       T       .       PASS    AA=A;DP=94      GT:GQ:DP        0|0:53:17       1|0:100:23      0|1:100:33
+5      155662123       rs62380676      A       G       .       PASS    AA=A;DP=100     GT:GQ:DP        0|0:53:17       1|0:100:23      0|1:100:60
+10     75866663        rs7091719       T       G       .       PASS    AA=G;DP=99      GT:GQ:DP        0|0:53:17       1|0:100:23      0|1:100:62
+X      150752124       .       C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        0|0:53:17       1|0:100:24      0|1:100:33
+X      36732778        rs62586714      A       G       .       PASS    AA=A;DP=111     GT:GQ:DP        0|0:53:17       1|0:100:24      0|1:100:36
+5      29348099        .       G       T       .       PASS    AA=g;DP=98      GT:GQ:DP        0|0:53:17       1|0:100:24      0|1:100:58
+5      166586360       rs10062506      A       G       .       PASS    AA=G;DP=99      GT:GQ:DP        0|0:53:17       1|0:100:25      0|1:100:60
+6      161670878       .       A       T       .       PASS    AA=A;DP=111     GT:GQ:DP        0|0:53:17       1|0:100:25      0|1:100:71
+21     23168929        .       C       A       .       PASS    AA=A;DP=115     GT:GQ:DP        0|0:53:17       1|0:100:26      0|1:100:73
+2      154552089       rs16835616      A       G       .       PASS    AA=A;DP=112     GT:GQ:DP        0|0:53:17       1|0:100:27      0|1:100:31
+5      56820793        .       A       G       .       PASS    AA=G;DP=102     GT:GQ:DP        0|0:53:17       1|0:100:27      0|1:100:58
+5      7104114 rs4549494       G       C       .       PASS    AA=G;DP=104     GT:GQ:DP        0|0:53:17       1|0:100:27      0|1:100:60
+20     40287047        .       C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        0|0:53:17       1|0:100:27      0|1:100:66
+15     53670401        .       C       G       .       PASS    AA=C;DP=127     GT:GQ:DP        0|0:53:17       1|0:100:27      0|1:100:85
+X      15463078        .       T       C       .       PASS    AA=T;DP=111     GT:GQ:DP        0|0:53:17       1|0:100:28      0|1:100:35
+2      107667793       .       C       G       .       PASS    AA=C;DP=108     GT:GQ:DP        0|0:53:17       1|0:100:28      0|1:100:62
+4      76167454        .       C       A       .       PASS    AA=A;DP=119     GT:GQ:DP        0|0:53:17       1|0:100:29      0|1:100:73
+5      43524494        rs56870372      A       C       .       PASS    AA=A;DP=104     GT:GQ:DP        0|0:53:17       1|0:100:31      0|1:100:57
+14     85525389        rs56222858      A       G       .       PASS    AA=a;DP=121     GT:GQ:DP        0|0:53:17       1|0:100:32      0|1:100:31
+X      73267579        rs55994954      T       C       .       PASS    AA=T;DP=140     GT:GQ:DP        0|0:53:17       1|0:100:32      0|1:100:45
+4      113312802       .       A       G       .       PASS    AA=A;DP=124     GT:GQ:DP        0|0:53:17       1|0:100:32      0|1:100:72
+6      23705486        .       C       T       .       PASS    AA=C;DP=79      GT:GQ:DP        0|0:53:17       1|0:19:15       0|1:100:36
+9      78561581        rs2039879       G       A       .       PASS    AA=g;DP=75      GT:GQ:DP        0|0:53:17       1|0:24:12       0|1:100:34
+8      84617549        .       C       G       .       PASS    AA=C;DP=99      GT:GQ:DP        0|0:53:17       1|0:27:18       0|1:100:65
+11     14396681        rs7949801       T       C       .       PASS    AA=T;DP=95      GT:GQ:DP        0|0:53:17       1|0:33:12       0|1:100:66
+11     1025081 .       C       T       .       PASS    AA=c;DP=66      GT:GQ:DP        0|0:53:17       1|0:34:13       0|1:100:35
+13     62313023        rs9598516       A       G       .       PASS    AA=A;DP=75      GT:GQ:DP        0|0:53:17       1|0:39:14       0|1:100:41
+5      85836158        .       G       A       .       PASS    AA=G;DP=98      GT:GQ:DP        0|0:53:17       1|0:51:9        0|1:100:75
+10     83789447        rs2207772       T       C       .       PASS    AA=T;DP=107     GT:GQ:DP        0|0:53:17       1|0:53:23       0|1:100:65
+20     38792655        .       T       C       .       PASS    AA=T;DP=85      GT:GQ:DP        0|0:53:17       1|0:54:17       0|1:100:54
+X      112378478       rs11152772      C       A       .       PASS    AA=A;DP=75      GT:GQ:DP        0|0:53:17       1|0:64:15       0|1:100:27
+3      177281927       rs62285761      G       A       .       PASS    AA=A;DP=121     GT:GQ:DP        0|0:53:17       1|0:65:17       0|1:100:45
+13     54004691        rs2095577       G       A       .       PASS    AA=G;DP=106     GT:GQ:DP        0|0:53:17       1|0:67:21       0|1:100:69
+4      131127486       rs2968935       G       A       .       PASS    AA=A;DP=70      GT:GQ:DP        0|0:53:17       1|0:68:13       0|1:100:40
+10     108732756       rs12247394      T       C       .       PASS    AA=T;DP=78      GT:GQ:DP        0|0:53:17       1|0:75:18       0|1:100:44
+3      164120310       .       G       A       .       PASS    AA=G;DP=72      GT:GQ:DP        0|0:53:17       1|0:78:11       0|1:100:45
+7      133376632       rs1806667       T       G       .       PASS    AA=T;DP=68      GT:GQ:DP        0|0:53:17       1|0:79:16       0|1:100:24
+1      180376576       .       C       T       .       PASS    AA=C;DP=114     GT:GQ:DP        0|0:53:17       1|0:79:24       0|1:100:73
+5      105777024       rs34524115      C       G       .       PASS    AA=C;DP=73      GT:GQ:DP        0|0:53:17       1|0:80:15       0|1:100:27
+3      21110166        rs17008182      T       C       .       PASS    AA=T;DP=70      GT:GQ:DP        0|0:53:17       1|0:81:15       0|1:100:26
+X      57389644        rs5960956       G       A       .       PASS    AA=G;DP=116     GT:GQ:DP        0|0:53:17       1|0:86:23       0|1:100:43
+7      53603764        rs10258315      A       G       .       PASS    AA=A;DP=95      GT:GQ:DP        0|0:53:17       1|0:88:13       0|1:100:49
+10     55831798        .       T       C       .       PASS    AA=T;DP=58      GT:GQ:DP        0|0:53:17       1|0:88:18       0|1:67:15
+X      84748655        .       T       C       .       PASS    AA=T;DP=110     GT:GQ:DP        0|0:53:17       1|0:88:19       0|1:100:37
+11     98915900        rs7943142       G       T       .       PASS    AA=G;DP=88      GT:GQ:DP        0|0:53:17       1|0:91:16       0|1:100:55
+4      76555376        .       G       A       .       PASS    AA=g;DP=89      GT:GQ:DP        0|0:53:17       1|0:92:20       0|1:100:52
+7      115337525       .       G       C       .       PASS    AA=G;DP=70      GT:GQ:DP        0|0:53:17       1|0:93:20       0|1:90:22
+X      145905661       .       C       A       .       PASS    AA=A;DP=97      GT:GQ:DP        0|0:53:17       1|0:94:13       0|1:100:34
+3      64448165        .       C       T       .       PASS    AA=T;DP=79      GT:GQ:DP        0|0:53:17       1|0:95:15       0|1:100:50
+6      76108225        rs59194866      C       T       .       PASS    AA=C;DP=86      GT:GQ:DP        0|0:53:17       1|0:95:18       0|1:100:50
+3      46986363        .       A       G       .       PASS    AA=a;DP=101     GT:GQ:DP        0|0:53:17       1|0:95:18       0|1:100:66
+16     49884143        rs9926038       A       G       .       PASS    AA=A;DP=86      GT:GQ:DP        0|0:53:17       1|0:96:16       0|1:100:54
+X      146921833       rs5951758       G       A       .       PASS    AA=A;DP=103     GT:GQ:DP        0|0:53:17       1|0:97:22       0|1:100:25
+3      100414389       .       A       G       .       PASS    AA=A;DP=105     GT:GQ:DP        0|0:53:17       1|0:99:20       0|1:100:50
+13     89265409        rs9522745       T       A       .       PASS    AA=T;DP=70      GT:GQ:DP        0|0:53:18       0|1:100:17      0|0:69:23
+3      198285907       .       C       T       .       PASS    AA=C;DP=102     GT:GQ:DP        0|0:53:18       0|1:100:19      0|0:100:62
+1      58603385        rs765694        T       A       .       PASS    AA=T;DP=127;HM2 GT:GQ:DP        0|0:53:18       0|1:100:25      0|0:100:40
+X      31646481        rs62589486      C       T       .       PASS    AA=T;DP=122     GT:GQ:DP        0|0:53:18       0|1:100:25      0|0:87:38
+16     82538911        rs12447050      C       T       .       PASS    AA=C;DP=68      GT:GQ:DP        0|0:53:18       0|1:100:8       0|0:100:35
+1      246754500       .       C       T       .       PASS    AA=.;DP=94      GT:GQ:DP        0|0:53:18       1|0:100:14      0|1:100:62
+21     21773184        rs2826858       T       C       .       PASS    AA=T;DP=86      GT:GQ:DP        0|0:53:18       1|0:100:16      0|1:100:51
+10     66302995        .       G       A       .       PASS    AA=G;DP=84      GT:GQ:DP        0|0:53:18       1|0:100:16      0|1:100:52
+12     70175804        rs58772625      G       C       .       PASS    AA=C;DP=88      GT:GQ:DP        0|0:53:18       1|0:100:16      0|1:100:53
+7      690619  .       A       T       .       PASS    AA=A;DP=114     GT:GQ:DP        0|0:53:18       1|0:100:16      0|1:100:81
+2      141365249       .       T       C       .       PASS    AA=T;DP=78      GT:GQ:DP        0|0:53:18       1|0:100:21      0|1:100:39
+8      79143116        rs7831471       G       A       .       PASS    AA=G;DP=105     GT:GQ:DP        0|0:53:18       1|0:100:22      0|1:100:65
+9      12362886        .       A       G       .       PASS    AA=A;DP=77      GT:GQ:DP        0|0:53:18       1|0:100:23      0|1:100:33
+6      77164096        .       T       C       .       PASS    AA=T;DP=100     GT:GQ:DP        0|0:53:18       1|0:100:23      0|1:100:62
+1      210221010       .       A       G       .       PASS    AA=A;DP=97      GT:GQ:DP        0|0:53:18       1|0:65:19       0|1:100:63
+1      89239615        .       A       C       .       PASS    AA=a;DP=94      GT:GQ:DP        0|0:53:18       1|0:69:19       0|1:100:52
+5      46438481        .       C       T       .       PASS    AA=.;DP=104     GT:GQ:DP        0|0:53:18       1|0:70:13       0|1:100:74
+21     27058451        rs2989321       C       T       .       PASS    AA=C;DP=105     GT:GQ:DP        0|0:53:18       1|0:76:31       0|1:100:57
+3      56255098        rs13065094      G       A       .       PASS    AA=A;DP=80      GT:GQ:DP        0|0:53:18       1|0:77:10       0|1:100:53
+6      95129173        .       A       T       .       PASS    AA=A;DP=87      GT:GQ:DP        0|0:53:18       1|0:78:14       0|1:100:54
+1      96786279        .       C       T       .       PASS    AA=C;DP=87      GT:GQ:DP        0|0:53:18       1|0:80:21       0|1:100:32
+2      28757232        rs2049691       G       A       .       PASS    AA=G;DP=93      GT:GQ:DP        0|0:53:18       1|0:82:18       0|1:100:47
+13     64113159        .       C       T       .       PASS    AA=C;DP=105     GT:GQ:DP        0|0:53:18       1|0:95:21       0|1:100:27
+6      157253334       .       T       A       .       PASS    AA=T;DP=110     GT:GQ:DP        0|0:53:19       1|0:100:14      0|1:100:78
+8      115173752       .       T       C       .       PASS    AA=T;DP=102     GT:GQ:DP        0|0:53:19       1|0:100:16      0|1:100:45
+6      65302694        rs2050620       A       G       .       PASS    AA=G;DP=71      GT:GQ:DP        0|0:53:19       1|0:100:19      0|1:100:29
+2      20990340        rs12710746      G       C       .       PASS    AA=G;DP=110     GT:GQ:DP        0|0:53:19       1|0:100:19      0|1:100:61
+21     36346235        rs2835258       G       A       .       PASS    AA=g;DP=90      GT:GQ:DP        0|0:53:19       1|0:100:20      0|1:100:48
+14     51810116        rs41312486      C       T       .       PASS    AA=T;DP=129     GT:GQ:DP        0|0:53:19       1|0:100:28      0|1:100:81
+2      240314397       rs735617        T       C       .       PASS    AA=T;DP=98      GT:GQ:DP        0|0:53:19       1|0:45:9        0|1:100:57
+X      94568162        .       T       C       .       PASS    AA=T;DP=103     GT:GQ:DP        0|0:53:19       1|0:67:19       0|1:100:30
+6      42724972        .       G       A       .       PASS    AA=G;DP=115     GT:GQ:DP        0|0:53:19       1|0:77:26       0|1:100:70
+12     10063445        rs11053549      C       T       .       PASS    AA=C;DP=85      GT:GQ:DP        0|0:53:19       1|0:89:16       0|1:100:48
+X      87749785        rs7051369       T       C       .       PASS    AA=t;DP=120     GT:GQ:DP        0|0:53:19       1|0:98:23       0|1:100:35
+2      34218848        rs11895195      A       G       .       PASS    AA=A;DP=103     GT:GQ:DP        0|0:53:20       1|0:43:22       0|1:100:63
+11     79624732        rs11231982      T       C       .       PASS    AA=C;DP=82      GT:GQ:DP        0|0:53:20       1|0:55:22       0|1:100:41
+6      140122353       rs59604738      A       C       .       PASS    AA=A;DP=112     GT:GQ:DP        0|0:53:21       1|0:100:23      0|1:100:69
+3      13784089        rs62234848      G       T       .       PASS    AA=G;DP=127     GT:GQ:DP        0|0:53:22       0|1:100:20      0|0:100:40
+10     93366484        .       G       A       .       PASS    AA=G;DP=93      GT:GQ:DP        0|0:53:22       1|0:100:20      0|1:100:52
+1      156446107       rs402699        G       A       .       PASS    AA=G;DP=105;HM2 GT:GQ:DP        0|0:53:23       1|0:100:17      0|1:100:67
+4      114467992       rs7676554       A       C       .       PASS    AA=A;DP=105     GT:GQ:DP        0|0:53:23       1|0:100:20      0|1:100:63
+7      107578992       .       C       A       .       PASS    AA=c;DP=88      GT:GQ:DP        0|0:53:23       1|0:75:18       0|1:100:38
+13     50526353        rs7991487       T       A       .       PASS    AA=T;DP=121     GT:GQ:DP        0|0:53:23       1|0:87:22       0|1:100:76
+X      63552135        rs58469269      T       A       .       PASS    AA=T;DP=110     GT:GQ:DP        0|0:53:24       1|0:100:29      0|1:100:35
+2      23556556        rs58912751      G       A       .       PASS    AA=G;DP=111     GT:GQ:DP        0|0:53:25       1|0:92:16       0|1:100:69
+6      133018238       .       G       A       .       PASS    AA=G;DP=83      GT:GQ:DP        0|0:53:26       1|0:53:16       0|1:100:41
+3      78944002        rs9817612       G       T       .       PASS    AA=G;DP=145     GT:GQ:DP        0|0:53:28       1|0:100:36      0|1:100:81
+1      218197339       rs11118468      A       G       .       PASS    AA=A;DP=100     GT:GQ:DP        0|0:53:29       1|1:22:20       0|1:100:51
+13     23700749        rs1220551       C       A       .       PASS    AA=A;DP=127     GT:GQ:DP        0|0:53:29       1|1:58:21       0|1:100:32
+19     36029210        .       T       A       .       PASS    AA=T;DP=114     GT:GQ:DP        0|0:53:29       1|1:61:22       0|1:100:64
+2      107043934       rs2949223       A       T       .       PASS    AA=T;DP=122     GT:GQ:DP        0|0:53:30       1|1:46:19       0|1:100:71
+11     95768142        .       G       T       .       PASS    AA=G;DP=107     GT:GQ:DP        0|0:53:31       0|1:100:14      0|0:100:65
+18     20533959        rs339931        T       C       .       PASS    AA=C;DP=104     GT:GQ:DP        0|0:53:32       1|0:100:20      0|1:100:52
+8      21759493        rs10087125      A       C       .       PASS    AA=C;DP=107     GT:GQ:DP        0|0:53:32       1|1:37:15       0|1:100:64
+17     36139105        rs1589947       T       C       .       PASS    AA=T;DP=71      GT:GQ:DP        0|0:54:18       1|1:14:15       0|1:100:27
+5      99975944        .       G       A       .       PASS    AA=G;DP=82      GT:GQ:DP        0|0:54:18       1|1:16:12       0|1:100:52
+16     55876375        rs12922657      A       G       .       PASS    AA=G;DP=67      GT:GQ:DP        0|0:54:18       1|1:17:10       0|1:100:28
+5      43349327        rs12514399      C       T       .       PASS    AA=C;DP=74      GT:GQ:DP        0|0:54:18       1|1:19:8        0|1:100:38
+4      107266942       rs7692652       A       G       .       PASS    AA=G;DP=77      GT:GQ:DP        0|0:54:18       1|1:19:9        0|1:100:28
+5      177556154       rs35224974      G       C       .       PASS    AA=G;DP=103     GT:GQ:DP        0|0:54:18       1|1:22:10       0|1:100:73
+7      52743213        rs1631945       T       G       .       PASS    AA=T;DP=76      GT:GQ:DP        0|0:54:18       1|1:23:17       0|1:100:41
+5      18462627        rs2968444       A       G       .       PASS    AA=A;DP=60      GT:GQ:DP        0|0:54:18       1|1:28:12       0|1:100:22
+18     69099685        rs4341834       A       T       .       PASS    AA=T;DP=76      GT:GQ:DP        0|0:54:18       1|1:28:12       0|1:100:47
+13     54388596        rs1118523       A       G       .       PASS    AA=A;DP=72      GT:GQ:DP        0|0:54:18       1|1:34:16       0|1:100:37
+12     72743779        .       G       T       .       PASS    AA=G;DP=72      GT:GQ:DP        0|0:54:18       1|1:37:14       0|1:100:40
+12     59761691        rs2690339       G       C       .       PASS    AA=G;DP=75      GT:GQ:DP        0|0:54:18       1|1:37:14       0|1:100:44
+22     44686557        rs4074422       C       T       .       PASS    AA=C;DP=112     GT:GQ:DP        0|0:54:18       1|1:37:14       0|1:100:84
+20     17514854        rs16999438      C       A       .       PASS    AA=C;DP=116     GT:GQ:DP        0|0:54:18       1|1:37:22       0|1:100:77
+4      90407376        rs6532151       T       C       .       PASS    AA=T;DP=99      GT:GQ:DP        0|0:54:18       1|1:40:15       0|1:100:66
+X      9765806 rs6640523       C       T       .       PASS    AA=C;DP=92      GT:GQ:DP        0|0:54:18       1|1:43:17       0|1:100:36
+8      35815847        rs16884486      T       C       .       PASS    AA=C;DP=106     GT:GQ:DP        0|0:54:18       1|1:43:17       0|1:100:73
+X      24435166        rs57210207      T       C       .       PASS    AA=C;DP=103     GT:GQ:DP        0|0:54:18       1|1:46:19       0|1:100:43
+4      61878007        rs1032895       A       C       .       PASS    AA=C;DP=72      GT:GQ:DP        0|0:54:18       1|1:48:23       0|1:100:23
+X      82022127        rs5968041       T       G       .       PASS    AA=G;DP=111     GT:GQ:DP        0|0:54:18       1|1:54:25       0|1:100:27
+4      150951905       rs10024629      G       A       .       PASS    AA=A;DP=100     GT:GQ:DP        0|0:54:18       1|1:55:20       0|1:100:62
+15     21790312        rs4778380       A       C       .       PASS    AA=.;DP=118     GT:GQ:DP        0|0:54:18       1|1:55:21       0|1:100:80
+X      22034446        .       C       T       .       PASS    AA=T;DP=128     GT:GQ:DP        0|0:54:18       1|1:58:23       0|1:100:48
+5      8254584 rs7702073       A       G       .       PASS    AA=G;DP=112     GT:GQ:DP        0|0:54:18       1|1:64:24       0|1:100:68
+16     62925155        rs8050002       G       C       .       PASS    AA=C;DP=105     GT:GQ:DP        0|0:54:18       1|1:76:27       0|1:100:48
+X      102431393       rs7066261       G       A       .       PASS    AA=G;DP=114     GT:GQ:DP        0|0:54:18       1|1:76:28       0|1:100:43
+3      187778948       rs7622195       C       T       .       PASS    AA=T;DP=120     GT:GQ:DP        0|0:54:18       1|1:85:30       0|1:100:73
+8      30867540        rs12547732      C       T       .       PASS    AA=T;DP=120     GT:GQ:DP        0|0:54:18       1|1:97:34       0|1:100:69
+4      87754018        rs56920198      G       C       .       PASS    AA=G;DP=119     GT:GQ:DP        0|0:54:19       1|0:60:20       0|1:100:38
+4      185665703       rs6650934       C       T       .       PASS    AA=C;DP=96      GT:GQ:DP        0|0:54:19       1|1:16:21       0|1:100:56
+18     11276874        rs4797525       C       G       .       PASS    AA=G;DP=92      GT:GQ:DP        0|0:54:19       1|1:22:16       0|1:100:45
+1      219192944       rs17009108      T       C       .       PASS    AA=T;DP=113;HM2;HM3     GT:GQ:DP        0|0:54:19       1|1:25:25       0|1:100:71
+10     48225801        rs7097286       C       T       .       PASS    AA=C;DP=94      GT:GQ:DP        0|0:54:19       1|1:28:11       0|1:100:64
+10     24867157        rs7100799       A       G       .       PASS    AA=G;DP=97      GT:GQ:DP        0|0:54:19       1|1:34:14       0|1:100:64
+17     43400494        rs4794333       T       C       .       PASS    AA=T;DP=88      GT:GQ:DP        0|0:54:19       1|1:37:15       0|1:100:54
+4      126082238       rs11945096      T       A       .       PASS    AA=A;DP=91      GT:GQ:DP        0|0:54:19       1|1:43:16       0|1:100:56
+7      132511212       rs11760697      C       G       .       PASS    AA=c;DP=94      GT:GQ:DP        0|0:54:19       1|1:49:19       0|1:100:56
+1      22843512        rs666537        T       C       .       PASS    AA=C;DP=104;HM2 GT:GQ:DP        0|0:54:19       1|1:49:19       0|1:100:67
+11     13328774        rs34834014      T       C       .       PASS    AA=t;DP=110     GT:GQ:DP        0|0:54:19       1|1:52:20       0|1:100:27
+2      143088756       .       G       A       .       PASS    AA=A;DP=86      GT:GQ:DP        0|0:54:19       1|1:52:21       0|1:100:47
+14     93554647        rs7150027       C       T       .       PASS    AA=T;DP=95      GT:GQ:DP        0|0:54:19       1|1:5:12        0|1:100:63
+11     15432928        rs7106127       A       G       .       PASS    AA=A;DP=98      GT:GQ:DP        0|0:54:19       1|1:70:25       0|1:100:54
+X      37653503        rs2144997       G       A       .       PASS    AA=A;DP=98      GT:GQ:DP        0|0:54:19       1|1:76:27       0|1:100:23
+4      30088679        rs16867945      C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        0|0:54:19       1|1:76:27       0|1:100:60
+6      120421883       rs9481997       A       G       .       PASS    AA=a;DP=93      GT:GQ:DP        0|0:54:20       1|1:37:14       0|1:100:60
+18     3857179 rs12960494      C       A       .       PASS    AA=A;DP=103     GT:GQ:DP        0|0:54:22       0|1:100:21      0|0:100:51
+5      139309250       rs9686629       A       G       .       PASS    AA=A;DP=116     GT:GQ:DP        0|0:54:22       0|1:100:25      0|0:100:67
+11     51169870        .       G       T       .       PASS    AA=.;DP=120     GT:GQ:DP        0|0:54:23       0|1:100:33      0|0:100:65
+9      25206871        .       G       A       .       PASS    AA=G;DP=107     GT:GQ:DP        0|0:54:23       1|0:54:19       0|1:100:65
+5      168725824       rs10044168      A       C       .       PASS    AA=C;DP=141     GT:GQ:DP        0|0:54:24       0|1:100:30      0|0:98:48
+10     36240296        .       C       A       .       PASS    AA=C;DP=97      GT:GQ:DP        0|0:54:24       1|0:100:31      0|1:100:41
+2      60436574        rs58955256      A       G       .       PASS    AA=A;DP=116     GT:GQ:DP        0|0:54:24       1|0:100:33      0|1:100:59
+4      11921189        .       G       T       .       PASS    AA=G;DP=89      GT:GQ:DP        0|0:54:24       1|0:50:14       0|1:100:50
+10     123279849       .       A       G       .       PASS    AA=A;DP=96      GT:GQ:DP        0|0:54:24       1|0:93:22       0|1:100:39
+11     64556417        rs533164        A       G       .       PASS    AA=G;DP=81      GT:GQ:DP        0|0:54:24       1|1:46:17       0|1:100:35
+15     64800016        rs2439401       T       C       .       PASS    AA=C;DP=126     GT:GQ:DP        0|0:54:24       1|1:46:17       0|1:100:84
+9      10320340        rs10118721      G       A       .       PASS    AA=A;DP=116     GT:GQ:DP        0|0:54:24       1|1:49:25       0|1:100:65
+17     50058578        .       C       T       .       PASS    AA=C;DP=122     GT:GQ:DP        0|0:54:25       1|0:100:20      0|1:100:80
+3      156775798       .       A       T       .       PASS    AA=A;DP=103     GT:GQ:DP        0|0:54:25       1|0:93:20       0|1:100:58
+13     78543271        .       G       T       .       PASS    AA=G;DP=86      GT:GQ:DP        0|0:54:26       1|0:100:18      0|1:100:43
+3      87120937        rs56346369      C       T       .       PASS    AA=T;DP=92      GT:GQ:DP        0|0:54:26       1|0:100:23      0|1:100:43
+5      93900995        rs56967455      A       T       .       PASS    AA=A;DP=113     GT:GQ:DP        0|0:54:26       1|0:100:23      0|1:100:63
+5      84576697        rs10452477      T       A       .       PASS    AA=A;DP=117     GT:GQ:DP        0|0:54:26       1|0:100:23      0|1:100:70
+3      162409534       rs6774919       T       C       .       PASS    AA=T;DP=134     GT:GQ:DP        0|0:54:26       1|0:100:25      0|1:100:70
+2      104585572       rs10166372      A       C       .       PASS    AA=C;DP=117     GT:GQ:DP        0|0:54:26       1|0:100:28      0|1:100:64
+6      165297904       rs7748405       A       G       .       PASS    AA=G;DP=131     GT:GQ:DP        0|0:54:26       1|0:100:29      0|1:100:71
+19     21060632        .       T       C       .       PASS    AA=T;DP=111     GT:GQ:DP        0|0:54:26       1|0:100:33      0|1:100:55
+11     80117581        rs7119646       T       G       .       PASS    AA=T;DP=130     GT:GQ:DP        0|0:54:26       1|0:100:33      0|1:100:71
+5      161656740       .       G       A       .       PASS    AA=G;DP=112     GT:GQ:DP        0|0:54:26       1|0:54:24       0|1:100:58
+8      16656983        .       A       G       .       PASS    AA=A;DP=113     GT:GQ:DP        0|0:54:27       0|1:100:20      0|0:100:66
+11     10698627        rs11824209      C       T       .       PASS    AA=C;DP=137     GT:GQ:DP        0|0:54:27       0|1:100:21      0|0:100:45
+1      200460057       rs3010069       G       A       .       PASS    AA=A;DP=126;HM2;HM3     GT:GQ:DP        0|0:54:27       0|1:100:25      0|0:100:72
+8      97716079        .       G       T       .       PASS    AA=G;DP=128     GT:GQ:DP        0|0:54:27       0|1:100:26      0|0:100:66
+5      116692892       .       G       T       .       PASS    AA=G;DP=121     GT:GQ:DP        0|0:54:27       1|0:100:26      0|1:100:64
+4      54348102        rs28538396      T       A       .       PASS    AA=T;DP=142     GT:GQ:DP        0|0:54:28       1|1:42:27       0|1:100:87
+3      132225377       rs17330404      T       C       .       PASS    AA=T;DP=127     GT:GQ:DP        0|0:54:29       1|0:100:23      0|1:100:72
+3      7077080 .       G       T       .       PASS    AA=G;DP=126     GT:GQ:DP        0|0:54:29       1|0:100:26      0|1:100:72
+8      144847272       rs12679165      G       T       .       PASS    AA=G;DP=102     GT:GQ:DP        0|0:54:29       1|0:35:6        0|1:100:67
+7      152505099       rs34584710      G       T       .       PASS    AA=G;DP=126     GT:GQ:DP        0|0:54:29       1|1:70:26       0|1:100:71
+17     60725482        rs55809615      A       G       .       PASS    AA=A;DP=94      GT:GQ:DP        0|0:54:32       0|1:100:9       0|0:100:53
+4      41090015        rs17628171      C       T       .       PASS    AA=C;DP=146     GT:GQ:DP        0|0:54:33       1|0:100:32      0|1:100:83
+11     35878000        rs2137451       G       A       .       PASS    AA=G;DP=72      GT:GQ:DP        0|0:55:18       1|0:65:13       0|1:100:43
+4      161531275       .       T       C       .       PASS    AA=t;DP=56      GT:GQ:DP        0|0:55:19       1|1:3:12        0|1:100:23
+6      80455775        .       G       A       .       PASS    AA=G;DP=71      GT:GQ:DP        0|0:55:20       0|1:100:20      0|0:84:30
+19     6682304 rs2279626       G       A       .       PASS    AA=G;DP=87      GT:GQ:DP        0|0:55:20       1|0:56:5        0|1:100:62
+22     41676445        .       C       T       .       PASS    AA=c;DP=73      GT:GQ:DP        0|0:55:20       1|0:8:11        0|1:100:42
+19     63189919        rs10406514      C       T       .       PASS    AA=C;DP=100     GT:GQ:DP        0|0:55:21       1|0:100:25      0|1:100:54
+19     17941991        rs7252014       G       A       .       PASS    AA=A;DP=90      GT:GQ:DP        0|0:55:22       0|1:100:13      0|0:100:53
+16     16998969        .       G       A       .       PASS    AA=G;DP=105     GT:GQ:DP        0|0:55:23       0|1:100:21      0|0:100:63
+10     78132599        rs61556925      C       T       .       PASS    AA=C;DP=105     GT:GQ:DP        0|0:55:23       0|1:100:27      0|0:100:56
+18     70406178        rs7505143       G       A       .       PASS    AA=g;DP=120     GT:GQ:DP        0|0:55:23       1|0:55:15       0|1:100:82
+4      119898866       .       T       C       .       PASS    AA=T;DP=91      GT:GQ:DP        0|0:55:24       0|1:100:23      0|0:100:45
+7      151975035       rs56216800      C       A       .       PASS    AA=C;DP=113     GT:GQ:DP        0|0:55:24       1|0:100:23      0|1:100:65
+7      133834319       .       T       A       .       PASS    AA=T;DP=87      GT:GQ:DP        0|0:55:24       1|0:84:18       0|1:87:44
+3      86304488        .       A       G       .       PASS    AA=N;DP=95      GT:GQ:DP        0|0:55:25       1|0:65:18       0|1:100:53
+10     4372842 rs10904236      G       C       .       PASS    AA=G;DP=90      GT:GQ:DP        0|0:55:26       1|0:60:15       0|1:100:50
+19     59792139        rs8105598       C       T       .       PASS    AA=C;DP=123     GT:GQ:DP        0|0:55:27       1|0:89:25       0|1:100:70
+15     34082593        .       A       G       .       PASS    AA=A;DP=128     GT:GQ:DP        0|0:55:28       0|1:100:15      0|0:100:85
+14     90183395        rs2277511       C       T       .       PASS    AA=C;DP=111     GT:GQ:DP        0|0:55:28       0|1:100:17      0|0:100:62
+14     81459782        .       C       T       .       PASS    AA=c;DP=72      GT:GQ:DP        0|0:55:28       0|1:100:17      0|0:69:23
+4      33159124        rs7671619       T       C       .       PASS    AA=T;DP=108     GT:GQ:DP        0|0:55:28       0|1:100:21      0|0:100:59
+1      238590196       rs1889867       G       T       .       PASS    AA=G;DP=143;HM2 GT:GQ:DP        0|0:55:28       0|1:100:22      0|0:100:45
+2      125459296       .       A       C       .       PASS    AA=A;DP=126     GT:GQ:DP        0|0:55:28       0|1:100:26      0|0:100:71
+8      70460691        .       G       A       .       PASS    AA=A;DP=112     GT:GQ:DP        0|0:55:28       0|1:100:28      0|0:100:58
+10     115094522       rs7097540       T       C       .       PASS    AA=C;DP=122     GT:GQ:DP        0|0:55:28       0|1:100:29      0|0:100:65
+7      24256314        rs58495133      C       A       .       PASS    AA=C;DP=99      GT:GQ:DP        0|0:55:28       1|0:100:20      0|1:100:49
+2      18161130        rs61394111      G       A       .       PASS    AA=G;DP=93      GT:GQ:DP        0|0:55:28       1|0:99:14       0|1:100:49
+5      90789273        rs6896551       T       G       .       PASS    AA=T;DP=116     GT:GQ:DP        0|0:55:28       1|1:42:27       0|1:100:64
+5      110731749       .       G       T       .       PASS    AA=G;DP=118     GT:GQ:DP        0|0:55:29       1|0:100:21      0|1:100:67
+16     6358281 rs2534748       T       C       .       PASS    AA=T;DP=114     GT:GQ:DP        0|0:55:29       1|0:100:23      0|1:100:63
+8      137099600       rs12544435      T       G       .       PASS    AA=T;DP=111     GT:GQ:DP        0|0:55:29       1|0:100:26      0|1:100:56
+11     51073757        rs11513090      A       T       .       PASS    AA=.;DP=134     GT:GQ:DP        0|0:55:29       1|0:100:27      0|1:100:37
+13     98901498        .       A       C       .       PASS    AA=A;DP=123     GT:GQ:DP        0|0:55:29       1|0:100:28      0|1:100:65
+8      83953528        .       G       A       .       PASS    AA=A;DP=119     GT:GQ:DP        0|0:55:29       1|0:34:20       0|1:100:67
+15     58186427        .       G       A       .       PASS    AA=A;DP=126     GT:GQ:DP        0|0:55:29       1|0:62:26       0|1:100:68
+11     40985710        rs61887630      G       A       .       PASS    AA=G;DP=114     GT:GQ:DP        0|0:55:29       1|0:70:18       0|1:100:67
+18     48050694        rs62081522      T       C       .       PASS    AA=T;DP=127     GT:GQ:DP        0|0:55:29       1|0:97:21       0|1:100:77
+1      7799063 rs11121029      G       A       .       PASS    AA=G;DP=128;HM2 GT:GQ:DP        0|0:55:29       1|0:97:26       0|1:100:27
+17     11219126        rs16944653      T       C       .       PASS    AA=T;DP=96      GT:GQ:DP        0|0:55:30       1|0:100:19      0|1:100:46
+10     77532994        .       T       C       .       PASS    AA=T;DP=138     GT:GQ:DP        0|0:55:30       1|0:100:26      0|1:100:81
+1      59628992        rs835431        C       A       .       PASS    AA=A;DP=93;HM2;HM3      GT:GQ:DP        0|0:55:30       1|1:31:13       0|1:100:52
+3      146518329       rs7618903       G       T       .       PASS    AA=T;DP=111     GT:GQ:DP        0|0:55:30       1|1:67:24       0|1:100:57
+5      173683171       rs2162728       C       T       .       PASS    AA=T;DP=141     GT:GQ:DP        0|0:55:34       0|1:100:23      0|0:100:36
+2      195522416       rs1823829       T       A       .       PASS    AA=T;DP=79      GT:GQ:DP        0|0:56:17       0|1:100:10      0|0:100:51
+9      8291783 .       A       G       .       PASS    AA=A;DP=91      GT:GQ:DP        0|0:56:17       0|1:100:14      0|0:100:56
+10     68114740        rs7915695       T       C       .       PASS    AA=T;DP=87      GT:GQ:DP        0|0:56:17       0|1:100:14      0|0:100:58
+3      18395686        rs13099497      A       G       .       PASS    AA=A;DP=67      GT:GQ:DP        0|0:56:17       0|1:100:15      0|0:100:36
+9      30506878        .       A       T       .       PASS    AA=A;DP=114     GT:GQ:DP        0|0:56:17       0|1:100:15      0|0:100:39
+9      29059571        rs12338368      T       C       .       PASS    AA=T;DP=88      GT:GQ:DP        0|0:56:17       0|1:100:15      0|0:100:56
+14     39850936        rs2415590       A       G       .       PASS    AA=A;DP=89      GT:GQ:DP        0|0:56:17       0|1:100:15      0|0:100:57
+15     98810759        .       G       C       .       PASS    AA=G;DP=103     GT:GQ:DP        0|0:56:17       0|1:100:15      0|0:100:69
+7      107494588       .       A       C       .       PASS    AA=A;DP=60      GT:GQ:DP        0|0:56:17       0|1:100:15      0|0:75:25
+X      46928999        .       C       T       .       PASS    AA=C;DP=89      GT:GQ:DP        0|0:56:17       0|1:100:16      0|0:100:37
+8      139880591       rs11992506      T       C       .       PASS    AA=T;DP=84      GT:GQ:DP        0|0:56:17       0|1:100:16      0|0:100:54
+6      57114350        rs2273919       C       T       .       PASS    AA=T;DP=87      GT:GQ:DP        0|0:56:17       0|1:100:16      0|0:100:57
+1      226896145       .       A       G       .       PASS    AA=A;DP=104     GT:GQ:DP        0|0:56:17       0|1:100:16      0|0:100:70
+3      3530425 rs60006665      C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        0|0:56:17       0|1:100:17      0|0:100:41
+14     96718648        rs10135685      A       G       .       PASS    AA=A;DP=80      GT:GQ:DP        0|0:56:17       0|1:100:17      0|0:100:46
+13     70530259        .       C       A       .       PASS    AA=C;DP=92      GT:GQ:DP        0|0:56:17       0|1:100:17      0|0:100:56
+12     56353974        .       G       A       .       PASS    AA=G;DP=98      GT:GQ:DP        0|0:56:17       0|1:100:17      0|0:100:64
+11     31633057        rs7481589       C       G       .       PASS    AA=G;DP=103     GT:GQ:DP        0|0:56:17       0|1:100:17      0|0:100:68
+2      139501051       .       C       T       .       PASS    AA=C;DP=79      GT:GQ:DP        0|0:56:17       0|1:100:18      0|0:100:45
+4      60218803        .       G       A       .       PASS    AA=G;DP=85      GT:GQ:DP        0|0:56:17       0|1:100:18      0|0:100:50
+X      133260650       rs4448441       T       C       .       PASS    AA=C;DP=127     GT:GQ:DP        0|0:56:17       0|1:100:18      0|0:100:51
+4      43969200        .       A       G       .       PASS    AA=A;DP=87      GT:GQ:DP        0|0:56:17       0|1:100:18      0|0:100:54
+16     13649601        rs4781522       G       A       .       PASS    AA=g;DP=100     GT:GQ:DP        0|0:56:17       0|1:100:18      0|0:100:63
+4      127804606       rs13117262      G       T       .       PASS    AA=T;DP=112     GT:GQ:DP        0|0:56:17       0|1:100:18      0|0:93:31
+9      10007360        .       A       G       .       PASS    AA=A;DP=78      GT:GQ:DP        0|0:56:17       0|1:100:19      0|0:100:40
+7      108725137       .       A       G       .       PASS    AA=A;DP=75      GT:GQ:DP        0|0:56:17       0|1:100:19      0|0:100:41
+18     60726648        .       C       G       .       PASS    AA=C;DP=106     GT:GQ:DP        0|0:56:17       0|1:100:19      0|0:100:70
+21     36210823        .       G       A       .       PASS    AA=G;DP=66      GT:GQ:DP        0|0:56:17       0|1:100:19      0|0:87:30
+18     21779522        rs1380192       T       G       .       PASS    AA=T;DP=77      GT:GQ:DP        0|0:56:17       0|1:100:20      0|0:100:44
+2      141725526       rs380870        T       C       .       PASS    AA=T;DP=88      GT:GQ:DP        0|0:56:17       0|1:100:20      0|0:100:51
+18     49102047        .       T       C       .       PASS    AA=T;DP=93      GT:GQ:DP        0|0:56:17       0|1:100:20      0|0:100:55
+7      117134318       rs11768272      G       A       .       PASS    AA=G;DP=100     GT:GQ:DP        0|0:56:17       0|1:100:20      0|0:100:60
+8      89457277        .       G       T       .       PASS    AA=G;DP=98      GT:GQ:DP        0|0:56:17       0|1:100:20      0|0:100:62
+1      157543459       rs12123454      C       T       .       PASS    AA=C;DP=113     GT:GQ:DP        0|0:56:17       0|1:100:20      0|0:100:75
+15     44231869        rs10083630      C       T       .       PASS    AA=C;DP=111     GT:GQ:DP        0|0:56:17       0|1:100:21      0|0:100:74
+1      180074408       rs624356        T       C       .       PASS    AA=T;DP=81      GT:GQ:DP        0|0:56:17       0|1:100:22      0|0:100:41
+1      90688215        rs1027854       A       G       .       PASS    AA=A;DP=123;HM2;HM3     GT:GQ:DP        0|0:56:17       0|1:100:22      0|0:100:48
+10     58770579        rs57115671      C       T       .       PASS    AA=C;DP=134     GT:GQ:DP        0|0:56:17       0|1:100:22      0|0:100:48
+6      19667108        rs62402573      T       C       .       PASS    AA=T;DP=113     GT:GQ:DP        0|0:56:17       0|1:100:22      0|0:100:70
+13     47169340        rs9534743       A       G       .       PASS    AA=G;DP=114     GT:GQ:DP        0|0:56:17       0|1:100:23      0|0:100:35
+5      10327112        rs9312726       G       A       .       PASS    AA=G;DP=81      GT:GQ:DP        0|0:56:17       0|1:100:23      0|0:100:41
+4      31840544        rs11931938      T       G       .       PASS    AA=T;DP=96      GT:GQ:DP        0|0:56:17       0|1:100:23      0|0:100:56
+4      139398524       rs6816398       C       T       .       PASS    AA=C;DP=105     GT:GQ:DP        0|0:56:17       0|1:100:23      0|0:100:64
+7      37946154        rs10951543      C       T       .       PASS    AA=C;DP=122     GT:GQ:DP        0|0:56:17       0|1:100:24      0|0:100:38
+6      141747175       rs9403297       G       A       .       PASS    AA=G;DP=125     GT:GQ:DP        0|0:56:17       0|1:100:24      0|0:100:40
+11     103561698       .       G       A       .       PASS    AA=G;DP=129     GT:GQ:DP        0|0:56:17       0|1:100:24      0|0:100:45
+4      182942004       .       T       G       .       PASS    AA=T;DP=98      GT:GQ:DP        0|0:56:17       0|1:100:24      0|0:100:58
+7      146239957       .       T       A       .       PASS    AA=A;DP=82      GT:GQ:DP        0|0:56:17       0|1:100:24      0|0:93:31
+3      145939412       .       T       A       .       PASS    AA=T;DP=86      GT:GQ:DP        0|0:56:17       0|1:100:25      0|0:100:43
+X      132821579       rs2267510       C       G       .       PASS    AA=G;DP=119     GT:GQ:DP        0|0:56:17       0|1:100:25      0|0:100:49
+X      7376719 rs12007552      G       A       .       PASS    AA=G;DP=141     GT:GQ:DP        0|0:56:17       0|1:100:25      0|0:100:49
+8      51452477        rs4147344       T       A       .       PASS    AA=A;DP=95      GT:GQ:DP        0|0:56:17       0|1:100:25      0|0:100:54
+3      141212006       .       G       A       .       PASS    AA=G;DP=132     GT:GQ:DP        0|0:56:17       0|1:100:25      0|0:100:91
+4      14087643        rs28374912      T       C       .       PASS    AA=t;DP=130     GT:GQ:DP        0|0:56:17       0|1:100:26      0|0:100:40
+X      67090515        rs16990427      G       A       .       PASS    AA=G;DP=130     GT:GQ:DP        0|0:56:17       0|1:100:27      0|0:100:43
+3      89603821        rs17026944      G       A       .       PASS    AA=A;DP=117     GT:GQ:DP        0|0:56:17       0|1:100:27      0|0:93:31
+X      150422468       rs57278027      T       A       .       PASS    AA=T;DP=141     GT:GQ:DP        0|0:56:17       0|1:100:28      0|0:100:50
+8      110627594       .       T       G       .       PASS    AA=T;DP=107     GT:GQ:DP        0|0:56:17       0|1:100:28      0|0:100:64
+9      17771810        rs9407871       G       A       .       PASS    AA=G;DP=118     GT:GQ:DP        0|0:56:17       0|1:100:28      0|0:100:72
+X      12350979        .       G       A       .       PASS    AA=G;DP=139     GT:GQ:DP        0|0:56:17       0|1:100:31      0|0:100:44
+1      185464657       .       A       G       .       PASS    AA=A;DP=110     GT:GQ:DP        0|0:56:17       0|1:100:31      0|0:100:60
+5      154977124       .       C       T       .       PASS    AA=C;DP=123     GT:GQ:DP        0|0:56:17       0|1:100:34      0|0:100:73
+4      156900294       .       C       G       .       PASS    AA=C;DP=82      GT:GQ:DP        0|0:56:17       0|1:100:8       0|0:100:57
+3      95588495        rs11920835      T       C       .       PASS    AA=T;DP=75      GT:GQ:DP        0|0:56:18       0|1:100:12      0|0:100:45
+2      158764650       .       G       T       .       PASS    AA=G;DP=78      GT:GQ:DP        0|0:56:18       0|1:100:14      0|0:100:46
+X      19586165        .       C       T       .       PASS    AA=c;DP=113     GT:GQ:DP        0|0:56:18       0|1:100:18      0|0:100:43
+X      40626492        rs5963203       C       T       .       PASS    AA=T;DP=110     GT:GQ:DP        0|0:56:18       0|1:100:18      0|0:100:45
+20     18905358        .       C       G       .       PASS    AA=C;DP=92      GT:GQ:DP        0|0:56:18       0|1:100:18      0|0:100:58
+11     91455335        rs61318637      C       G       .       PASS    AA=G;DP=101     GT:GQ:DP        0|0:56:18       0|1:100:19      0|0:100:65
+2      227078790       .       C       T       .       PASS    AA=C;DP=102     GT:GQ:DP        0|0:56:18       0|1:100:19      0|0:100:65
+2      229067009       rs16824988      C       T       .       PASS    AA=C;DP=103     GT:GQ:DP        0|0:56:18       0|1:100:20      0|0:100:50
+13     53680695        .       A       C       .       PASS    AA=A;DP=90      GT:GQ:DP        0|0:56:18       0|1:100:21      0|0:100:53
+3      183461006       rs12496462      C       T       .       PASS    AA=C;DP=99      GT:GQ:DP        0|0:56:18       0|1:100:22      0|0:100:59
+1      178599310       rs16855910      G       A       .       PASS    AA=G;DP=129;HM2 GT:GQ:DP        0|0:56:18       0|1:100:22      0|0:100:88
+X      93070134        rs34055174      A       G       .       PASS    AA=G;DP=104     GT:GQ:DP        0|0:56:18       0|1:100:22      0|0:72:24
+12     39831640        .       G       A       .       PASS    AA=G;DP=97      GT:GQ:DP        0|0:56:18       0|1:100:23      0|0:100:54
+9      30640605        rs12343992      A       T       .       PASS    AA=A;DP=87      GT:GQ:DP        0|0:56:18       0|1:100:24      0|0:100:46
+2      117172265       rs17046287      A       G       .       PASS    AA=a;DP=100     GT:GQ:DP        0|0:56:18       0|1:100:24      0|0:100:56
+2      78398623        rs7587964       A       C       .       PASS    AA=A;DP=108     GT:GQ:DP        0|0:56:18       0|1:100:24      0|0:100:65
+1      183595602       .       G       A       .       PASS    AA=g;DP=117     GT:GQ:DP        0|0:56:18       0|1:100:26      0|0:100:74
+13     55817693        rs9634868       C       T       .       PASS    AA=C;DP=117     GT:GQ:DP        0|0:56:18       0|1:100:28      0|0:100:58
+7      133185019       rs55796860      G       A       .       PASS    AA=G;DP=120     GT:GQ:DP        0|0:56:18       0|1:100:28      0|0:100:78
+X      119014534       rs7062343       C       T       .       PASS    AA=c;DP=133     GT:GQ:DP        0|0:56:18       0|1:100:29      0|0:100:39
+5      140485670       rs246668        C       A       .       PASS    AA=C;DP=83      GT:GQ:DP        0|0:56:18       1|0:100:12      0|1:100:48
+7      96196495        .       G       A       .       PASS    AA=G;DP=66      GT:GQ:DP        0|0:56:18       1|0:100:13      0|1:91:32
+10     124069073       rs7081388       C       T       .       PASS    AA=C;DP=96      GT:GQ:DP        0|0:56:18       1|0:100:14      0|1:100:61
+5      145132722       rs6580385       G       A       .       PASS    AA=G;DP=95      GT:GQ:DP        0|0:56:18       1|0:100:14      0|1:100:62
+6      163701874       rs12529052      A       G       .       PASS    AA=A;DP=109     GT:GQ:DP        0|0:56:18       1|0:100:14      0|1:100:78
+3      172182246       rs61791060      G       A       .       PASS    AA=G;DP=82      GT:GQ:DP        0|0:56:18       1|0:100:15      0|1:100:50
+7      87711187        .       G       A       .       PASS    AA=G;DP=98      GT:GQ:DP        0|0:56:18       1|0:100:15      0|1:100:65
+5      6070641 rs458814        C       G       .       PASS    AA=C;DP=108     GT:GQ:DP        0|0:56:18       1|0:100:15      0|1:100:70
+17     27523227        rs59448729      C       T       .       PASS    AA=C;DP=111     GT:GQ:DP        0|0:56:18       1|0:100:16      0|1:100:33
+1      86338190        rs13374196      C       T       .       PASS    AA=C;DP=83      GT:GQ:DP        0|0:56:18       1|0:100:16      0|1:100:35
+13     33863411        rs7323331       T       G       .       PASS    AA=T;DP=79      GT:GQ:DP        0|0:56:18       1|0:100:16      0|1:100:44
+6      100193745       rs670049        A       C       .       PASS    AA=A;DP=83      GT:GQ:DP        0|0:56:18       1|0:100:16      0|1:100:51
+10     87313797        .       C       T       .       PASS    AA=c;DP=88      GT:GQ:DP        0|0:56:18       1|0:100:16      0|1:100:54
+1      217617712       rs61674172      A       T       .       PASS    AA=A;DP=64      GT:GQ:DP        0|0:56:18       1|0:100:17      0|1:100:25
+6      72725482        .       A       G       .       PASS    AA=A;DP=75      GT:GQ:DP        0|0:56:18       1|0:100:17      0|1:100:28
+5      125859155       .       T       C       .       PASS    AA=T;DP=75      GT:GQ:DP        0|0:56:18       1|0:100:17      0|1:100:40
+15     35521127        rs12101579      G       A       .       PASS    AA=G;DP=83      GT:GQ:DP        0|0:56:18       1|0:100:17      0|1:100:48
+3      106325343       .       A       G       .       PASS    AA=A;DP=87      GT:GQ:DP        0|0:56:18       1|0:100:17      0|1:100:52
+14     73172177        .       C       T       .       PASS    AA=C;DP=92      GT:GQ:DP        0|0:56:18       1|0:100:17      0|1:100:57
+20     22418147        rs35509795      T       C       .       PASS    AA=T;DP=95      GT:GQ:DP        0|0:56:18       1|0:100:17      0|1:100:60
+4      13174901        rs9996590       G       T       .       PASS    AA=G;DP=74      GT:GQ:DP        0|0:56:18       1|0:100:18      0|1:100:27
+13     52354945        .       A       C       .       PASS    AA=A;DP=99      GT:GQ:DP        0|0:56:18       1|0:100:18      0|1:100:66
+5      3825867 rs17698073      T       C       .       PASS    AA=T;DP=119     GT:GQ:DP        0|0:56:18       1|0:100:18      0|1:100:83
+X      100226773       .       C       G       .       PASS    AA=C;DP=84      GT:GQ:DP        0|0:56:18       1|0:100:19      0|1:100:23
+11     55167929        rs11230517      A       T       .       PASS    AA=a;DP=70      GT:GQ:DP        0|0:56:18       1|0:100:19      0|1:100:25
+18     69136824        .       G       A       .       PASS    AA=G;DP=79      GT:GQ:DP        0|0:56:18       1|0:100:19      0|1:100:27
+14     46384637        rs13379475      A       T       .       PASS    AA=A;DP=70      GT:GQ:DP        0|0:56:18       1|0:100:19      0|1:100:30
+X      53333583        rs61084111      G       A       .       PASS    AA=G;DP=94      GT:GQ:DP        0|0:56:18       1|0:100:19      0|1:100:44
+10     6948364 rs17309788      T       C       .       PASS    AA=T;DP=90      GT:GQ:DP        0|0:56:18       1|0:100:19      0|1:100:54
+11     38331036        rs9630176       G       T       .       PASS    AA=G;DP=93      GT:GQ:DP        0|0:56:18       1|0:100:19      0|1:100:56
+14     53607838        rs61694468      T       C       .       PASS    AA=t;DP=102     GT:GQ:DP        0|0:56:18       1|0:100:19      0|1:100:65
+5      135894895       .       C       G       .       PASS    AA=C;DP=117     GT:GQ:DP        0|0:56:18       1|0:100:19      0|1:100:65
+X      32902573        rs33932287      T       A       .       PASS    AA=A;DP=93      GT:GQ:DP        0|0:56:18       1|0:100:20      0|1:100:30
+10     100382728       rs685041        C       T       .       PASS    AA=T;DP=83      GT:GQ:DP        0|0:56:18       1|0:100:20      0|1:100:42
+4      133781904       rs725307        A       G       .       PASS    AA=A;DP=87      GT:GQ:DP        0|0:56:18       1|0:100:20      0|1:100:44
+13     104624703       rs16966030      C       A       .       PASS    AA=C;DP=92      GT:GQ:DP        0|0:56:18       1|0:100:20      0|1:100:56
+9      10197334        .       A       G       .       PASS    AA=A;DP=98      GT:GQ:DP        0|0:56:18       1|0:100:20      0|1:100:60
+4      161410807       rs11940632      A       T       .       PASS    AA=A;DP=103     GT:GQ:DP        0|0:56:18       1|0:100:20      0|1:100:63
+5      23324584        rs16892362      A       G       .       PASS    AA=A;DP=100     GT:GQ:DP        0|0:56:18       1|0:100:20      0|1:100:64
+12     42347360        rs277214        T       C       .       PASS    AA=T;DP=86      GT:GQ:DP        0|0:56:18       1|0:100:21      0|1:100:42
+5      99554142        .       G       A       .       PASS    AA=G;DP=81      GT:GQ:DP        0|0:56:18       1|0:100:21      0|1:100:44
+1      81401861        rs11163204      A       G       .       PASS    AA=A;DP=86;HM2  GT:GQ:DP        0|0:56:18       1|0:100:21      0|1:100:47
+6      5362142 rs6904616       A       C       .       PASS    AA=A;DP=92      GT:GQ:DP        0|0:56:18       1|0:100:21      0|1:100:54
+14     86940137        rs8005784       C       G       .       PASS    AA=G;DP=99      GT:GQ:DP        0|0:56:18       1|0:100:21      0|1:100:57
+5      89113526        .       G       C       .       PASS    AA=g;DP=118     GT:GQ:DP        0|0:56:18       1|0:100:21      0|1:100:77
+4      168632131       rs28832431      C       T       .       PASS    AA=C;DP=116     GT:GQ:DP        0|0:56:18       1|0:100:21      0|1:100:78
+5      18334809        rs4866092       G       A       .       PASS    AA=A;DP=81      GT:GQ:DP        0|0:56:18       1|0:100:22      0|1:100:31
+6      108836936       rs12193069      G       A       .       PASS    AA=G;DP=101     GT:GQ:DP        0|0:56:18       1|0:100:22      0|1:100:61
+9      25578039        .       A       C       .       PASS    AA=A;DP=103     GT:GQ:DP        0|0:56:18       1|0:100:22      0|1:100:61
+3      192759969       .       A       G       .       PASS    AA=A;DP=84      GT:GQ:DP        0|0:56:18       1|0:100:23      0|1:100:43
+20     6979366 rs6117578       A       G       .       PASS    AA=A;DP=92      GT:GQ:DP        0|0:56:18       1|0:100:23      0|1:100:52
+2      52357186        .       C       A       .       PASS    AA=A;DP=95      GT:GQ:DP        0|0:56:18       1|0:100:23      0|1:100:55
+X      100322270       rs55787880      G       A       .       PASS    AA=G;DP=89      GT:GQ:DP        0|0:56:18       1|0:100:24      0|1:100:27
+8      115628346       .       T       G       .       PASS    AA=T;DP=82      GT:GQ:DP        0|0:56:18       1|0:100:24      0|1:100:30
+4      98267037        .       G       A       .       PASS    AA=G;DP=98      GT:GQ:DP        0|0:56:18       1|0:100:24      0|1:100:50
+6      93462369        rs9452089       A       G       .       PASS    AA=G;DP=83      GT:GQ:DP        0|0:56:18       1|0:100:25      0|1:100:40
+18     2111322 rs570666        A       G       .       PASS    AA=A;DP=99      GT:GQ:DP        0|0:56:18       1|0:100:25      0|1:100:56
+15     97044958        rs7173191       G       A       .       PASS    AA=G;DP=107     GT:GQ:DP        0|0:56:18       1|0:100:25      0|1:100:65
+13     43428137        rs7321896       G       T       .       PASS    AA=G;DP=118     GT:GQ:DP        0|0:56:18       1|0:100:25      0|1:100:76
+4      15039669        rs13149679      T       C       .       PASS    AA=T;DP=134     GT:GQ:DP        0|0:56:18       1|0:100:26      0|1:100:48
+2      59094754        .       C       T       .       PASS    AA=c;DP=113     GT:GQ:DP        0|0:56:18       1|0:100:26      0|1:100:72
+6      105392817       rs2499659       A       T       .       PASS    AA=A;DP=114     GT:GQ:DP        0|0:56:18       1|0:100:27      0|1:100:30
+12     71014352        rs4468388       C       T       .       PASS    AA=C;DP=92      GT:GQ:DP        0|0:56:18       1|0:100:27      0|1:100:47
+15     46490971        .       G       A       .       PASS    AA=G;DP=105     GT:GQ:DP        0|0:56:18       1|0:100:27      0|1:100:60
+8      95468794        rs16916788      C       T       .       PASS    AA=C;DP=123     GT:GQ:DP        0|0:56:18       1|0:100:27      0|1:100:75
+2      116609160       rs62157597      T       C       .       PASS    AA=T;DP=106     GT:GQ:DP        0|0:56:18       1|0:100:28      0|1:100:60
+X      86307060        rs4828437       G       A       .       PASS    AA=g;DP=136     GT:GQ:DP        0|0:56:18       1|0:100:29      0|1:100:47
+7      123429468       .       A       G       .       PASS    AA=A;DP=101     GT:GQ:DP        0|0:56:18       1|0:100:29      0|1:100:56
+20     16775601        rs6034654       C       G       .       PASS    AA=G;DP=119     GT:GQ:DP        0|0:56:18       1|0:100:29      0|1:100:71
+15     35959013        rs8037300       A       G       .       PASS    AA=G;DP=84      GT:GQ:DP        0|0:56:18       1|0:100:29      0|1:94:30
+20     9690351 rs6118718       G       T       .       PASS    AA=G;DP=102     GT:GQ:DP        0|0:56:18       1|0:100:30      0|1:100:54
+X      42305088        rs5964182       C       T       .       PASS    AA=C;DP=121     GT:GQ:DP        0|0:56:18       1|0:100:31      0|1:100:35
+11     4413975 rs11032267      G       A       .       PASS    AA=G;DP=124     GT:GQ:DP        0|0:56:18       1|0:100:34      0|1:100:74
+9      131238994       .       A       G       .       PASS    AA=a;DP=157     GT:GQ:DP        0|0:56:18       1|0:100:37      0|1:100:101
+3      29046839        .       C       A       .       PASS    AA=C;DP=112     GT:GQ:DP        0|0:56:18       1|0:21:20       0|1:100:25
+14     41963351        .       T       C       .       PASS    AA=T;DP=78      GT:GQ:DP        0|0:56:18       1|0:42:13       0|1:100:40
+17     74673170        rs57729852      C       T       .       PASS    AA=C;DP=72      GT:GQ:DP        0|0:56:18       1|0:44:11       0|1:100:36
+8      115220071       rs6469507       T       C       .       PASS    AA=T;DP=64      GT:GQ:DP        0|0:56:18       1|0:49:13       0|1:100:22
+15     28049242        rs13380132      C       G       .       PASS    AA=G;DP=99      GT:GQ:DP        0|0:56:18       1|0:49:14       0|1:100:67
+12     80259335        .       A       G       .       PASS    AA=A;DP=77      GT:GQ:DP        0|0:56:18       1|0:52:17       0|1:100:33
+15     96831412        .       C       T       .       PASS    AA=C;DP=84      GT:GQ:DP        0|0:56:18       1|0:55:15       0|1:100:51
+1      161533945       rs1553697       C       T       .       PASS    AA=C;DP=103;HM2 GT:GQ:DP        0|0:56:18       1|0:55:20       0|1:100:64
+3      9413610 rs2728932       G       A       .       PASS    AA=A;DP=63      GT:GQ:DP        0|0:56:18       1|0:59:7        0|1:89:31
+11     91393474        rs10830813      T       C       .       PASS    AA=T;DP=71      GT:GQ:DP        0|0:56:18       1|0:62:8        0|1:100:43
+1      119323474       .       T       C       .       PASS    AA=T;DP=84      GT:GQ:DP        0|0:56:18       1|0:63:11       0|1:100:55
+7      20150146        rs6946746       T       C       .       PASS    AA=T;DP=110     GT:GQ:DP        0|0:56:18       1|0:65:16       0|1:100:77
+3      31601146        .       C       T       .       PASS    AA=C;DP=102     GT:GQ:DP        0|0:56:18       1|0:66:16       0|1:100:64
+3      140813293       .       C       T       .       PASS    AA=c;DP=77      GT:GQ:DP        0|0:56:18       1|0:67:15       0|1:100:35
+18     10199019        .       C       G       .       PASS    AA=C;DP=109     GT:GQ:DP        0|0:56:18       1|0:68:27       0|1:100:66
+1      238903282       .       G       A       .       PASS    AA=G;DP=74      GT:GQ:DP        0|0:56:18       1|0:69:14       0|1:100:43
+2      50892633        rs3914729       G       T       .       PASS    AA=T;DP=87      GT:GQ:DP        0|0:56:18       1|0:70:15       0|1:100:54
+6      62703824        .       C       T       .       PASS    AA=C;DP=82      GT:GQ:DP        0|0:56:18       1|0:72:15       0|1:100:48
+2      19815069        .       A       T       .       PASS    AA=A;DP=107     GT:GQ:DP        0|0:56:18       1|0:73:16       0|1:100:75
+10     132193910       rs11017290      A       G       .       PASS    AA=A;DP=82      GT:GQ:DP        0|0:56:18       1|0:74:17       0|1:100:47
+3      27262404        rs61365285      T       A       .       PASS    AA=T;DP=110     GT:GQ:DP        0|0:56:18       1|0:75:17       0|1:100:74
+12     42406359        rs60813848      C       T       .       PASS    AA=T;DP=87      GT:GQ:DP        0|0:56:18       1|0:76:21       0|1:100:49
+10     68638311        rs1904640       A       G       .       PASS    AA=G;DP=110     GT:GQ:DP        0|0:56:18       1|0:77:20       0|1:100:72
+8      73061715        rs10090454      A       G       .       PASS    AA=A;DP=82      GT:GQ:DP        0|0:56:18       1|0:78:17       0|1:100:50
+8      84302971        rs60952863      A       T       .       PASS    AA=A;DP=102     GT:GQ:DP        0|0:56:18       1|0:79:18       0|1:100:63
+10     3322235 rs12765094      C       T       .       PASS    AA=C;DP=89      GT:GQ:DP        0|0:56:18       1|0:80:10       0|1:100:60
+3      79813658        rs7613557       A       T       .       PASS    AA=A;DP=107     GT:GQ:DP        0|0:56:18       1|0:80:17       0|1:100:69
+11     107340614       rs61906957      C       T       .       PASS    AA=C;DP=97      GT:GQ:DP        0|0:56:18       1|0:82:14       0|1:100:63
+16     7176161 .       T       C       .       PASS    AA=T;DP=69      GT:GQ:DP        0|0:56:18       1|0:84:17       0|1:100:37
+1      73397052        rs61767506      C       A       .       PASS    AA=C;DP=66      GT:GQ:DP        0|0:56:18       1|0:86:10       0|1:100:37
+11     7735471 rs11041557      C       T       .       PASS    AA=c;DP=67      GT:GQ:DP        0|0:56:18       1|0:87:15       0|1:100:25
+3      21459041        rs17273390      G       T       .       PASS    AA=G;DP=93      GT:GQ:DP        0|0:56:18       1|0:88:20       0|1:100:57
+6      16899539        rs1262921       G       A       .       PASS    AA=G;DP=95      GT:GQ:DP        0|0:56:18       1|0:90:15       0|1:100:56
+12     22030109        .       T       C       .       PASS    AA=T;DP=102     GT:GQ:DP        0|0:56:18       1|0:92:16       0|1:100:67
+9      38641952        .       A       C       .       PASS    AA=A;DP=113     GT:GQ:DP        0|0:56:18       1|0:94:23       0|1:100:73
+4      188356811       rs34907505      C       T       .       PASS    AA=T;DP=88      GT:GQ:DP        0|0:56:18       1|0:95:20       0|1:100:50
+13     102603257       rs1750416       C       T       .       PASS    AA=c;DP=63      GT:GQ:DP        0|0:56:18       1|0:97:21       0|1:100:13
+2      82653450        rs11900999      G       C       .       PASS    AA=G;DP=94      GT:GQ:DP        0|0:56:18       1|0:97:23       0|1:100:53
+3      154526362       .       T       G       .       PASS    AA=T;DP=74      GT:GQ:DP        0|0:56:18       1|0:99:13       0|1:100:44
+14     46821060        .       T       C       .       PASS    AA=T;DP=80      GT:GQ:DP        0|0:56:18       1|0:99:17       0|1:100:44
+12     30677836        rs12370947      G       C       .       PASS    AA=G;DP=87      GT:GQ:DP        0|0:56:19       0|1:100:22      0|0:100:47
+10     37278350        rs12249182      G       C       .       PASS    AA=C;DP=71      GT:GQ:DP        0|0:56:19       1|0:100:16      0|1:100:37
+18     34882199        rs1509222       G       A       .       PASS    AA=G;DP=91      GT:GQ:DP        0|0:56:19       1|0:100:18      0|1:100:54
+5      110521513       rs17459022      A       G       .       PASS    AA=A;DP=99      GT:GQ:DP        0|0:56:19       1|0:100:19      0|1:100:63
+8      134494699       rs6995489       C       A       .       PASS    AA=c;DP=123     GT:GQ:DP        0|0:56:19       1|0:100:19      0|1:100:82
+11     11097656        rs10840565      G       A       .       PASS    AA=G;DP=91      GT:GQ:DP        0|0:56:19       1|0:100:20      0|1:100:51
+7      118583839       rs10248244      G       A       .       PASS    AA=G;DP=84      GT:GQ:DP        0|0:56:19       1|0:100:21      0|1:100:35
+7      12063982        rs10251495      T       C       .       PASS    AA=T;DP=85      GT:GQ:DP        0|0:56:19       1|0:100:21      0|1:100:46
+7      144540680       rs59533684      T       C       .       PASS    AA=T;DP=93      GT:GQ:DP        0|0:56:19       1|0:100:21      0|1:100:51
+4      122953828       rs3811743       C       T       .       PASS    AA=C;DP=108     GT:GQ:DP        0|0:56:19       1|0:100:21      0|1:100:54
+8      13603443        .       C       T       .       PASS    AA=C;DP=108     GT:GQ:DP        0|0:56:19       1|0:100:21      0|1:100:68
+X      56855676        rs5960808       G       A       .       PASS    AA=G;DP=127     GT:GQ:DP        0|0:56:19       1|0:100:23      0|1:100:53
+3      96759102        rs13095621      G       A       .       PASS    AA=G;DP=99      GT:GQ:DP        0|0:56:19       1|0:100:23      0|1:100:58
+17     28835115        rs11650439      G       A       .       PASS    AA=G;DP=121     GT:GQ:DP        0|0:56:19       1|0:100:26      0|1:100:78
+14     81716306        rs60806468      G       C       .       PASS    AA=G;DP=115     GT:GQ:DP        0|0:56:19       1|0:100:27      0|1:100:72
+21     16505416        .       G       C       .       PASS    AA=G;DP=100     GT:GQ:DP        0|0:56:19       1|0:100:28      0|1:100:54
+5      128250736       rs1421890       C       T       .       PASS    AA=C;DP=111     GT:GQ:DP        0|0:56:19       1|0:100:30      0|1:100:60
+12     16088699        rs10772890      C       T       .       PASS    AA=c;DP=113     GT:GQ:DP        0|0:56:19       1|0:100:30      0|1:100:67
+16     80816300        rs58169377      C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        0|0:56:19       1|0:100:30      0|1:100:73
+11     76883627        rs59512659      T       C       .       PASS    AA=T;DP=98      GT:GQ:DP        0|0:56:19       1|0:29:18       0|1:100:61
+7      125211655       .       G       C       .       PASS    AA=C;DP=76      GT:GQ:DP        0|0:56:19       1|0:31:9        0|1:100:46
+20     55258838        rs4811830       C       A       .       PASS    AA=C;DP=77      GT:GQ:DP        0|0:56:19       1|0:36:14       0|1:100:29
+18     6949571 .       C       T       .       PASS    AA=c;DP=101     GT:GQ:DP        0|0:56:19       1|0:42:16       0|1:100:66
+6      91710632        .       T       C       .       PASS    AA=T;DP=104     GT:GQ:DP        0|0:56:19       1|0:46:17       0|1:100:65
+5      166138481       .       A       G       .       PASS    AA=A;DP=79      GT:GQ:DP        0|0:56:19       1|0:60:16       0|1:100:44
+5      88082346        rs2431391       C       T       .       PASS    AA=T;DP=64      GT:GQ:DP        0|0:56:19       1|0:64:17       0|1:100:20
+6      161782392       rs9458253       T       C       .       PASS    AA=t;DP=108     GT:GQ:DP        0|0:56:19       1|0:64:17       0|1:100:63
+4      65185435        rs4860615       G       A       .       PASS    AA=A;DP=84      GT:GQ:DP        0|0:56:19       1|0:72:17       0|1:100:49
+21     22516547        .       C       T       .       PASS    AA=C;DP=71      GT:GQ:DP        0|0:56:19       1|0:72:9        0|1:100:42
+4      189021372       rs4394051       T       G       .       PASS    AA=G;DP=112     GT:GQ:DP        0|0:56:19       1|0:81:14       0|1:100:79
+9      16188363        rs59092876      G       A       .       PASS    AA=G;DP=109     GT:GQ:DP        0|0:56:19       1|0:82:18       0|1:100:74
+1      231173308       .       C       T       .       PASS    AA=C;DP=88      GT:GQ:DP        0|0:56:19       1|0:83:10       0|1:100:59
+13     71720771        rs7995266       T       C       .       PASS    AA=T;DP=93      GT:GQ:DP        0|0:56:19       1|0:88:18       0|1:100:56
+1      70027218        rs56771124      C       A       .       PASS    AA=C;DP=111     GT:GQ:DP        0|0:56:19       1|0:89:23       0|1:100:69
+6      164951948       rs59331464      A       G       .       PASS    AA=a;DP=122     GT:GQ:DP        0|0:56:19       1|0:90:21       0|1:100:79
+13     56065566        .       G       A       .       PASS    AA=G;DP=93      GT:GQ:DP        0|0:56:19       1|0:92:17       0|1:100:58
+13     67282853        .       G       C       .       PASS    AA=G;DP=85      GT:GQ:DP        0|0:56:19       1|0:96:19       0|1:100:45
+9      84739422        rs10121180      C       T       .       PASS    AA=T;DP=90      GT:GQ:DP        0|0:56:20       1|0:100:16      0|1:100:55
+10     68242209        .       G       A       .       PASS    AA=g;DP=97      GT:GQ:DP        0|0:56:20       1|0:100:19      0|1:100:56
+2      39118279        rs6709646       G       C       .       PASS    AA=G;DP=77      GT:GQ:DP        0|0:56:20       1|0:100:20      0|1:100:37
+7      48709717        .       C       G       .       PASS    AA=C;DP=87      GT:GQ:DP        0|0:56:20       1|0:100:21      0|1:100:47
+3      198553322       .       T       C       .       PASS    AA=T;DP=104     GT:GQ:DP        0|0:56:20       1|0:100:22      0|1:100:64
+4      139085049       .       A       G       .       PASS    AA=A;DP=94      GT:GQ:DP        0|0:56:20       1|0:100:23      0|1:100:52
+15     96173659        .       C       G       .       PASS    AA=C;DP=95      GT:GQ:DP        0|0:56:20       1|0:100:28      0|1:100:49
+22     17921024        rs737856        A       G       .       PASS    AA=A;DP=62      GT:GQ:DP        0|0:56:20       1|0:85:10       0|1:100:24
+2      17760191        .       C       T       .       PASS    AA=c;DP=75      GT:GQ:DP        0|0:56:21       1|0:100:18      0|1:100:26
+15     27570569        .       A       G       .       PASS    AA=G;DP=70      GT:GQ:DP        0|0:56:21       1|0:59:12       0|1:100:32
+10     23979007        rs12260971      C       T       .       PASS    AA=C;DP=86      GT:GQ:DP        0|0:56:21       1|0:70:15       0|1:100:48
+6      81920817        rs9352955       C       T       .       PASS    AA=C;DP=109     GT:GQ:DP        0|0:56:22       0|1:100:26      0|0:100:63
+7      97064374        .       A       G       .       PASS    AA=A;DP=130     GT:GQ:DP        0|0:56:23       0|1:100:11      0|0:100:50
+12     62421056        rs10878086      C       T       .       PASS    AA=C;DP=101     GT:GQ:DP        0|0:56:23       0|1:100:18      0|0:100:61
+12     29663733        rs11830014      T       C       .       PASS    AA=T;DP=113     GT:GQ:DP        0|0:56:23       0|1:100:24      0|0:100:68
+5      159698359       rs4921277       G       T       .       PASS    AA=T;DP=137     GT:GQ:DP        0|0:56:23       0|1:100:35      0|0:100:37
+7      70520430        rs4425646       C       T       .       PASS    AA=T;DP=107     GT:GQ:DP        0|0:56:24       1|0:100:23      0|1:100:48
+20     37404786        rs7271906       C       G       .       PASS    AA=G;DP=105     GT:GQ:DP        0|0:56:24       1|1:55:20       0|1:100:62
+15     84349489        rs59457490      C       A       .       PASS    AA=c;DP=121     GT:GQ:DP        0|0:56:25       1|0:100:24      0|1:100:71
+17     32167041        rs4795144       A       G       .       PASS    AA=N;DP=112     GT:GQ:DP        0|0:56:25       1|0:44:13       0|1:100:62
+8      129174487       rs2392938       G       A       .       PASS    AA=G;DP=112     GT:GQ:DP        0|0:56:25       1|1:64:24       0|1:100:61
+7      38813530        rs10265859      T       C       .       PASS    AA=T;DP=116     GT:GQ:DP        0|0:56:26       0|1:100:15      0|0:81:33
+4      118106487       .       A       T       .       PASS    AA=A;DP=114     GT:GQ:DP        0|0:56:26       1|0:100:18      0|1:100:71
+10     55745403        rs12573536      T       G       .       PASS    AA=T;DP=118     GT:GQ:DP        0|0:56:26       1|0:100:25      0|1:100:64
+3      7347132 rs9859873       C       T       .       PASS    AA=T;DP=107     GT:GQ:DP        0|0:56:26       1|0:78:20       0|1:100:59
+17     40554524        rs7207047       G       A       .       PASS    AA=g;DP=98      GT:GQ:DP        0|0:56:26       1|0:84:11       0|1:100:63
+13     63646234        rs9571122       G       A       .       PASS    AA=A;DP=98      GT:GQ:DP        0|0:56:26       1|1:31:12       0|1:100:58
+4      182523685       .       T       C       .       PASS    AA=T;DP=114     GT:GQ:DP        0|0:56:27       0|1:100:24      0|0:100:62
+2      2608218 rs62106221      G       A       .       PASS    AA=G;DP=104     GT:GQ:DP        0|0:56:27       1|0:100:16      0|1:100:64
+3      172223293       rs55641619      A       G       .       PASS    AA=A;DP=93      GT:GQ:DP        0|0:56:27       1|0:62:18       0|1:100:47
+20     1970333 .       A       G       .       PASS    AA=A;DP=117     GT:GQ:DP        0|0:56:27       1|0:78:23       0|1:100:60
+11     48093566        rs4752897       G       A       .       PASS    AA=A;DP=136     GT:GQ:DP        0|0:56:28       1|1:52:27       0|1:100:82
+9      81678253        rs12345503      A       C       .       PASS    AA=A;DP=118     GT:GQ:DP        0|0:56:28       1|1:53:31       0|1:100:59
+13     92022678        .       C       G       .       PASS    AA=c;DP=135     GT:GQ:DP        0|0:56:29       0|1:100:34      0|0:100:73
+2      153926516       rs1837169       C       A       .       PASS    AA=C;DP=120     GT:GQ:DP        0|0:56:30       0|1:100:23      0|0:100:70
+2      169986986       rs6715816       C       T       .       PASS    AA=C;DP=102     GT:GQ:DP        0|0:56:37       1|0:84:20       0|1:100:35
+8      38705041        rs16887720      T       C       .       PASS    AA=C;DP=80      GT:GQ:DP        0|0:57:19       1|0:62:12       0|1:100:48
+15     66774794        rs34454913      G       T       .       PASS    AA=G;DP=98      GT:GQ:DP        0|0:57:19       1|0:63:19       0|1:100:48
+12     17150494        rs10743189      T       C       .       PASS    AA=t;DP=91      GT:GQ:DP        0|0:57:19       1|1:12:10       0|1:100:58
+5      140564045       rs2041260       T       C       .       PASS    AA=C;DP=78      GT:GQ:DP        0|0:57:19       1|1:19:8        0|1:100:52
+7      132195588       rs7805712       T       A       .       PASS    AA=T;DP=72      GT:GQ:DP        0|0:57:19       1|1:22:21       0|1:100:21
+3      23355264        rs1390084       G       A       .       PASS    AA=A;DP=73      GT:GQ:DP        0|0:57:19       1|1:34:13       0|1:100:32
+5      58083099        rs10041999      G       T       .       PASS    AA=g;DP=112     GT:GQ:DP        0|0:57:19       1|1:37:14       0|1:100:80
+7      144875052       rs4144080       A       T       .       PASS    AA=A;DP=85      GT:GQ:DP        0|0:57:19       1|1:37:15       0|1:100:52
+13     81393514        rs10507927      A       C       .       PASS    AA=A;DP=88      GT:GQ:DP        0|0:57:19       1|1:37:22       0|1:100:47
+4      100899291       rs1365493       A       C       .       PASS    AA=A;DP=93      GT:GQ:DP        0|0:57:19       1|1:38:20       0|1:100:55
+6      117179344       rs1336974       G       T       .       PASS    AA=G;DP=111     GT:GQ:DP        0|0:57:19       1|1:38:20       0|1:100:72
+7      105586979       rs10277896      A       G       .       PASS    AA=.;DP=102     GT:GQ:DP        0|0:57:19       1|1:40:24       0|1:100:59
+4      144759224       rs1018091       T       C       .       PASS    AA=t;DP=114     GT:GQ:DP        0|0:57:19       1|1:44:23       0|1:100:72
+2      82767998        rs9309599       C       T       .       PASS    AA=C;DP=78      GT:GQ:DP        0|0:57:19       1|1:46:17       0|1:100:35
+21     24070703        rs2252653       G       A       .       PASS    AA=G;DP=98      GT:GQ:DP        0|0:57:19       1|1:46:17       0|1:100:63
+2      112118688       rs9308628       C       T       .       PASS    AA=.;DP=101     GT:GQ:DP        0|0:57:19       1|1:46:17       0|1:100:66
+2      78602137        rs12328649      G       A       .       PASS    AA=-;DP=89      GT:GQ:DP        0|0:57:19       1|1:49:18       0|1:100:52
+10     54045979        rs10824684      G       A       .       PASS    AA=G;DP=95      GT:GQ:DP        0|0:57:19       1|1:54:25       0|1:100:51
+18     45891762        .       A       G       .       PASS    AA=G;DP=127     GT:GQ:DP        0|0:57:19       1|1:54:28       0|1:100:41
+8      82898075        rs935855        T       C       .       PASS    AA=T;DP=75      GT:GQ:DP        0|0:57:19       1|1:55:20       0|1:100:36
+X      153043675       rs5986958       G       A       .       PASS    AA=A;DP=94      GT:GQ:DP        0|0:57:19       1|1:55:20       0|1:100:37
+18     11823699        .       T       C       .       PASS    AA=C;DP=95      GT:GQ:DP        0|0:57:19       1|1:58:22       0|1:100:55
+21     28378643        .       G       A       .       PASS    AA=G;DP=96      GT:GQ:DP        0|0:57:19       1|1:58:22       0|1:100:56
+14     79255740        rs178388        A       C       .       PASS    AA=A;DP=99      GT:GQ:DP        0|0:57:19       1|1:58:22       0|1:100:61
+X      84721748        rs61184848      G       A       .       PASS    AA=A;DP=98      GT:GQ:DP        0|0:57:19       1|1:61:22       0|1:100:38
+15     79313357        rs12324786      C       T       .       PASS    AA=T;DP=91      GT:GQ:DP        0|0:57:19       1|1:67:24       0|1:100:52
+19     44812739        rs57533913      C       G       .       PASS    AA=c;DP=112     GT:GQ:DP        0|0:57:19       1|1:70:25       0|1:100:71
+X      106209281       rs6622145       T       G       .       PASS    AA=T;DP=144     GT:GQ:DP        0|0:57:19       1|1:79:29       0|1:100:36
+12     103593048       rs703672        A       G       .       PASS    AA=A;DP=96      GT:GQ:DP        0|0:57:19       1|1:82:30       0|1:100:38
+11     40525702        rs10837435      A       C       .       PASS    AA=A;DP=100     GT:GQ:DP        0|0:57:20       1|0:59:20       0|1:100:60
+3      4495610 .       A       G       .       PASS    AA=A;DP=70      GT:GQ:DP        0|0:57:20       1|0:61:15       0|1:100:29
+13     86493547        rs6492695       G       A       .       PASS    AA=G;DP=78      GT:GQ:DP        0|0:57:20       1|1:34:13       0|1:100:47
+14     40045544        rs17110852      T       C       .       PASS    AA=T;DP=99      GT:GQ:DP        0|0:57:20       1|1:34:19       0|1:100:57
+10     82734999        rs7076648       A       T       .       PASS    AA=a;DP=71      GT:GQ:DP        0|0:57:20       1|1:34:25       0|1:100:24
+17     34539682        rs9944461       C       T       .       PASS    AA=c;DP=102     GT:GQ:DP        0|0:57:20       1|1:43:16       0|1:100:26
+2      140061462       rs11687968      C       T       .       PASS    AA=T;DP=106     GT:GQ:DP        0|0:57:20       1|1:43:18       0|1:100:55
+7      120053750       rs10226133      C       G       .       PASS    AA=C;DP=88      GT:GQ:DP        0|0:57:20       1|1:46:18       0|1:100:38
+1      235663550       rs60811417      C       T       .       PASS    AA=C;DP=87      GT:GQ:DP        0|0:57:20       1|1:49:18       0|1:100:49
+18     40013984        rs9958933       G       A       .       PASS    AA=G;DP=96      GT:GQ:DP        0|0:57:20       1|1:49:19       0|1:100:57
+3      57359053        rs6802608       C       T       .       PASS    AA=C;DP=88      GT:GQ:DP        0|0:57:20       1|1:52:20       0|1:100:47
+7      34454130        .       T       C       .       PASS    AA=T;DP=87      GT:GQ:DP        0|0:57:20       1|1:55:20       0|1:100:48
+11     80841612        rs7127984       G       A       .       PASS    AA=A;DP=119     GT:GQ:DP        0|0:57:20       1|1:55:20       0|1:100:78
+8      19987499        rs13275622      C       A       .       PASS    AA=C;DP=100     GT:GQ:DP        0|0:57:20       1|1:58:21       0|1:100:60
+8      79434572        rs36032779      T       C       .       PASS    AA=t;DP=102     GT:GQ:DP        0|0:57:20       1|1:58:21       0|1:100:61
+8      16755767        rs7825889       C       T       .       PASS    AA=T;DP=74      GT:GQ:DP        0|0:57:21       1|1:22:9        0|1:100:45
+12     23675353        rs12318868      G       A       .       PASS    AA=A;DP=98      GT:GQ:DP        0|0:57:21       1|1:31:12       0|1:100:66
+1      15266180        rs10803344      C       T       .       PASS    AA=C;DP=121;HM2;HM3     GT:GQ:DP        0|0:57:21       1|1:73:27       0|1:100:73
+7      44521606        rs217430        A       G       .       PASS    AA=G;DP=135     GT:GQ:DP        0|0:57:23       0|1:100:28      0|0:100:84
+15     27356935        .       C       T       .       PASS    AA=C;DP=111     GT:GQ:DP        0|0:57:24       0|1:100:16      0|0:100:70
+2      236413005       rs4663619       T       C       .       PASS    AA=C;DP=127     GT:GQ:DP        0|0:57:24       0|1:100:20      0|0:100:75
+3      105283914       rs1731648       G       A       .       PASS    AA=A;DP=98      GT:GQ:DP        0|0:57:24       0|1:100:21      0|0:100:54
+5      121177245       .       T       A       .       PASS    AA=T;DP=128     GT:GQ:DP        0|0:57:24       0|1:100:21      0|0:100:84
+5      42654522        rs58233460      A       G       .       PASS    AA=A;DP=98      GT:GQ:DP        0|0:57:24       1|0:100:21      0|1:100:56
+2      29819242        rs17008591      G       A       .       PASS    AA=G;DP=103     GT:GQ:DP        0|0:57:25       0|1:100:20      0|0:100:43
+4      41644240        .       C       A       .       PASS    AA=C;DP=116     GT:GQ:DP        0|0:57:26       0|1:100:21      0|0:100:70
+6      16731396        rs57763404      C       T       .       PASS    AA=C;DP=126     GT:GQ:DP        0|0:57:26       1|0:100:30      0|1:100:69
+12     59347954        rs273805        T       G       .       PASS    AA=T;DP=121     GT:GQ:DP        0|0:57:26       1|1:81:35       0|1:100:61
+14     65810995        rs17103451      G       A       .       PASS    AA=A;DP=153     GT:GQ:DP        0|0:57:27       1|1:79:29       0|1:100:93
+14     104268399       rs60876857      C       G       .       PASS    AA=C;DP=98      GT:GQ:DP        0|0:57:28       1|0:58:9        0|1:100:50
+14     32983731        rs10133530      T       A       .       PASS    AA=T;DP=123     GT:GQ:DP        0|0:57:28       1|1:67:25       0|1:100:72
+20     7547514 rs10470071      T       G       .       PASS    AA=T;DP=82      GT:GQ:DP        0|0:57:30       1|0:100:15      0|1:100:32
+9      90245799        rs7874358       T       A       .       PASS    AA=A;DP=91      GT:GQ:DP        0|0:57:30       1|0:100:17      0|1:100:46
+4      37542727        rs4832963       C       G       .       PASS    AA=C;DP=99      GT:GQ:DP        0|0:57:30       1|0:100:18      0|1:100:43
+18     71116954        rs2639971       G       A       .       PASS    AA=G;DP=110     GT:GQ:DP        0|0:57:30       1|0:100:19      0|1:100:64
+4      136552859       rs28799667      C       A       .       PASS    AA=C;DP=139     GT:GQ:DP        0|0:57:30       1|0:100:19      0|1:100:87
+2      155211158       .       T       G       .       PASS    AA=T;DP=111     GT:GQ:DP        0|0:57:30       1|0:100:22      0|1:100:60
+9      95802089        rs2094929       T       C       .       PASS    AA=T;DP=137     GT:GQ:DP        0|0:57:30       1|0:100:26      0|1:100:69
+6      138711626       rs58375505      C       A       .       PASS    AA=C;DP=134     GT:GQ:DP        0|0:57:30       1|0:100:26      0|1:100:77
+1      86240720        rs567617        A       C       .       PASS    AA=C;DP=116     GT:GQ:DP        0|0:57:30       1|0:100:27      0|1:100:60
+4      157435068       rs17034349      A       C       .       PASS    AA=A;DP=128     GT:GQ:DP        0|0:57:30       1|0:100:32      0|1:100:68
+2      36842683        rs12052952      A       T       .       PASS    AA=A;DP=144     GT:GQ:DP        0|0:57:30       1|0:100:36      0|1:100:81
+1      39957575        rs506424        C       G       .       PASS    AA=C;DP=151     GT:GQ:DP        0|0:57:30       1|0:100:37      0|1:100:85
+6      3189964 .       T       C       .       PASS    AA=T;DP=141     GT:GQ:DP        0|0:57:30       1|0:55:21       0|1:100:90
+18     7214416 rs9966939       A       G       .       PASS    AA=G;DP=123     GT:GQ:DP        0|0:57:30       1|0:57:23       0|1:100:72
+X      106867990       .       G       T       .       PASS    AA=G;DP=142     GT:GQ:DP        0|0:57:30       1|0:68:27       0|1:100:50
+19     23403173        rs58151362      C       T       .       PASS    AA=C;DP=121     GT:GQ:DP        0|0:57:30       1|0:74:15       0|1:100:71
+14     42843471        .       G       T       .       PASS    AA=G;DP=96      GT:GQ:DP        0|0:57:30       1|0:88:21       0|1:100:46
+12     6455969 rs7979510       G       T       .       PASS    AA=g;DP=97      GT:GQ:DP        0|0:57:30       1|0:98:21       0|1:100:47
+4      181557116       rs17069332      G       T       .       PASS    AA=G;DP=132     GT:GQ:DP        0|0:57:35       1|1:79:28       0|1:100:72
+2      27535236        .       C       A       .       PASS    AA=C;DP=141     GT:GQ:DP        0|0:57:38       1|0:57:20       0|1:100:85
+9      28112122        rs62556529      G       A       .       PASS    AA=G;DP=83      GT:GQ:DP        0|0:58:19       1|0:100:16      0|1:100:45
+1      1006246 rs12092234      T       C       .       PASS    AA=C;DP=69      GT:GQ:DP        0|0:58:19       1|0:58:5        0|1:100:44
+7      56202680        rs13242188      A       T       .       PASS    AA=T;DP=84      GT:GQ:DP        0|0:58:19       1|0:5:11        0|1:100:53
+X      34835669        .       A       C       .       PASS    AA=A;DP=101     GT:GQ:DP        0|0:58:20       1|0:100:21      0|1:66:30
+5      2426878 rs7725087       C       T       .       PASS    AA=C;DP=99      GT:GQ:DP        0|0:58:20       1|0:67:11       0|1:100:66
+6      51807712        rs1326606       G       T       .       PASS    AA=G;DP=104     GT:GQ:DP        0|0:58:23       1|1:49:18       0|1:100:64
+20     4392109 .       C       T       .       PASS    AA=C;DP=99      GT:GQ:DP        0|0:58:24       0|1:100:15      0|0:100:57
+3      195540756       .       C       T       .       PASS    AA=-;DP=127     GT:GQ:DP        0|0:58:24       0|1:100:16      0|0:100:47
+2      134576406       rs60408912      T       C       .       PASS    AA=T;DP=100     GT:GQ:DP        0|0:58:24       1|0:100:19      0|1:100:59
+16     84997546        .       C       G       .       PASS    AA=C;DP=153     GT:GQ:DP        0|0:58:24       1|0:100:30      0|1:100:57
+1      107540356       .       A       G       .       PASS    AA=A;DP=122     GT:GQ:DP        0|0:58:24       1|0:100:34      0|1:100:59
+17     38868480        rs35744273      G       T       .       PASS    AA=-;DP=97      GT:GQ:DP        0|0:58:25       0|1:100:16      0|0:100:55
+5      114027053       rs17136928      G       A       .       PASS    AA=G;DP=127     GT:GQ:DP        0|0:58:25       0|1:100:25      0|0:100:78
+12     60634899        rs1371922       C       A       .       PASS    AA=C;DP=107     GT:GQ:DP        0|0:58:25       1|0:100:21      0|1:100:61
+6      23823497        rs6904532       A       G       .       PASS    AA=A;DP=120     GT:GQ:DP        0|0:58:25       1|0:100:22      0|1:100:72
+2      56895029        rs2870499       G       A       .       PASS    AA=A;DP=98      GT:GQ:DP        0|0:58:25       1|0:100:24      0|1:100:50
+1      17994771        rs11580969      G       T       .       PASS    AA=G;DP=110;HM2 GT:GQ:DP        0|0:58:25       1|0:32:17       0|1:100:69
+3      96032376        rs4411883       T       G       .       PASS    AA=T;DP=110     GT:GQ:DP        0|0:58:25       1|0:58:16       0|1:100:70
+15     91919410        rs12324169      G       A       .       PASS    AA=G;DP=101     GT:GQ:DP        0|0:58:25       1|0:95:25       0|1:100:51
+17     35478969        .       T       A       .       PASS    AA=T;DP=126     GT:GQ:DP        0|0:58:25       1|1:29:22       0|1:100:80
+9      133539003       rs56166802      A       C       .       PASS    AA=A;DP=119     GT:GQ:DP        0|0:58:26       1|0:100:22      0|1:100:71
+4      9210656 rs58673888      G       T       .       PASS    AA=g;DP=106     GT:GQ:DP        0|0:58:26       1|1:20:26       0|1:100:46
+20     6761972 rs34423709      C       T       .       PASS    AA=T;DP=113     GT:GQ:DP        0|0:58:27       1|0:100:19      0|1:100:66
+1      86057696        rs12091583      C       A       .       PASS    AA=C;DP=87;HM2  GT:GQ:DP        0|0:58:28       0|1:100:21      0|0:100:39
+9      120688653       rs4837586       A       G       .       PASS    AA=G;DP=107     GT:GQ:DP        0|0:58:28       1|0:100:18      0|1:100:62
+5      102584416       .       C       T       .       PASS    AA=C;DP=109     GT:GQ:DP        0|0:58:29       0|1:100:14      0|0:100:65
+15     98873181        .       C       A       .       PASS    AA=C;DP=126     GT:GQ:DP        0|0:58:29       0|1:100:16      0|0:100:87
+3      25596345        rs7644463       G       A       .       PASS    AA=A;DP=111     GT:GQ:DP        0|0:58:29       0|1:100:19      0|0:100:48
+5      80303069        rs34993 T       C       .       PASS    AA=C;DP=107     GT:GQ:DP        0|0:58:29       0|1:100:19      0|0:100:59
+10     56183530        rs60736816      G       A       .       PASS    AA=G;DP=101     GT:GQ:DP        0|0:58:29       0|1:100:20      0|0:100:55
+15     91537949        rs6416582       A       C       .       PASS    AA=A;DP=115     GT:GQ:DP        0|0:58:29       0|1:100:21      0|0:100:67
+6      89896791        .       C       T       .       PASS    AA=C;DP=102     GT:GQ:DP        0|0:58:29       0|1:100:23      0|0:100:51
+3      105170424       .       A       C       .       PASS    AA=A;DP=117     GT:GQ:DP        0|0:58:29       0|1:100:23      0|0:100:65
+7      73568074        .       A       G       .       PASS    AA=A;DP=135     GT:GQ:DP        0|0:58:29       0|1:100:23      0|0:100:82
+2      125699904       .       G       T       .       PASS    AA=G;DP=144     GT:GQ:DP        0|0:58:29       0|1:100:28      0|0:100:84
+1      104439657       .       A       C       .       PASS    AA=A;DP=131     GT:GQ:DP        0|0:58:29       0|1:100:30      0|0:100:72
+9      79313585        rs11788546      T       C       .       PASS    AA=T;DP=135     GT:GQ:DP        0|0:58:29       0|1:100:32      0|0:100:72
+11     102261577       rs672535        G       A       .       PASS    AA=A;DP=156     GT:GQ:DP        0|0:58:30       0|1:100:35      0|0:100:48
+1      169092103       rs2421501       A       G       .       PASS    AA=G;DP=128;HM2 GT:GQ:DP        0|0:58:31       1|1:21:26       0|1:100:72
+7      97495866        .       T       C       .       PASS    AA=T;DP=105     GT:GQ:DP        0|0:58:31       1|1:40:16       0|1:100:63
+9      37931641        .       G       T       .       PASS    AA=G;DP=142     GT:GQ:DP        0|0:58:33       0|1:100:14      0|0:100:96
+1      196430869       .       T       G       .       PASS    AA=T;DP=114     GT:GQ:DP        0|0:58:33       0|1:100:15      0|0:100:65
+1      240834301       rs7523607       A       C       .       PASS    AA=C;DP=110;HM2;HM3     GT:GQ:DP        0|0:58:35       1|1:46:17       0|1:100:59
+1      73081724        .       T       C       .       PASS    AA=T;DP=71      GT:GQ:DP        0|0:59:18       0|1:100:10      0|0:100:46
+3      410410  rs4685678       C       A       .       PASS    AA=A;DP=112     GT:GQ:DP        0|0:59:18       0|1:100:11      0|0:93:31
+5      29789744        rs1902512       G       A       .       PASS    AA=G;DP=82      GT:GQ:DP        0|0:59:18       0|1:100:12      0|0:100:54
+14     82974558        rs10484161      C       G       .       PASS    AA=C;DP=91      GT:GQ:DP        0|0:59:18       0|1:100:12      0|0:100:62
+14     56287745        rs8005025       G       A       .       PASS    AA=G;DP=106     GT:GQ:DP        0|0:59:18       0|1:100:12      0|0:99:33
+14     36364205        .       C       T       .       PASS    AA=C;DP=117     GT:GQ:DP        0|0:59:18       0|1:100:13      0|0:100:47
+3      1710833 rs11714214      A       G       .       PASS    AA=A;DP=103     GT:GQ:DP        0|0:59:18       0|1:100:13      0|0:100:60
+9      93076268        .       A       T       .       PASS    AA=A;DP=82      GT:GQ:DP        0|0:59:18       0|1:100:14      0|0:100:48
+11     41728487        .       A       G       .       PASS    AA=A;DP=98      GT:GQ:DP        0|0:59:18       0|1:100:14      0|0:100:64
+15     22160283        .       G       A       .       PASS    AA=.;DP=65      GT:GQ:DP        0|0:59:18       0|1:100:14      0|0:66:23
+13     67531692        rs6562517       G       C       .       PASS    AA=C;DP=96      GT:GQ:DP        0|0:59:18       0|1:100:15      0|0:100:62
+X      95746068        .       C       T       .       PASS    AA=C;DP=91      GT:GQ:DP        0|0:59:18       0|1:100:15      0|0:93:31
+X      69600711        .       G       A       .       PASS    AA=G;DP=110     GT:GQ:DP        0|0:59:18       0|1:100:16      0|0:100:39
+4      161663079       rs7692975       C       T       .       PASS    AA=C;DP=76      GT:GQ:DP        0|0:59:18       0|1:100:16      0|0:100:42
+3      63548736        .       A       G       .       PASS    AA=A;DP=86      GT:GQ:DP        0|0:59:18       0|1:100:16      0|0:100:51
+2      125521874       .       G       A       .       PASS    AA=G;DP=91      GT:GQ:DP        0|0:59:18       0|1:100:16      0|0:100:57
+5      19444535        .       T       A       .       PASS    AA=T;DP=71      GT:GQ:DP        0|0:59:18       0|1:100:16      0|0:63:21
+7      79859584        rs304788        A       G       .       PASS    AA=A;DP=63      GT:GQ:DP        0|0:59:18       0|1:100:16      0|0:72:24
+5      42234778        .       C       T       .       PASS    AA=C;DP=88      GT:GQ:DP        0|0:59:18       0|1:100:17      0|0:100:47
+2      227359526       .       C       A       .       PASS    AA=C;DP=92      GT:GQ:DP        0|0:59:18       0|1:100:17      0|0:100:57
+4      168757027       rs17053380      C       T       .       PASS    AA=T;DP=97      GT:GQ:DP        0|0:59:18       0|1:100:17      0|0:100:57
+3      84317408        rs9849196       G       A       .       PASS    AA=G;DP=93      GT:GQ:DP        0|0:59:18       0|1:100:17      0|0:100:59
+4      142339414       rs58363074      G       A       .       PASS    AA=G;DP=99      GT:GQ:DP        0|0:59:18       0|1:100:17      0|0:100:66
+8      120303515       .       G       A       .       PASS    AA=A;DP=104     GT:GQ:DP        0|0:59:18       0|1:100:17      0|0:100:69
+18     27888551        rs60448569      C       A       .       PASS    AA=C;DP=116     GT:GQ:DP        0|0:59:18       0|1:100:17      0|0:100:77
+13     112373194       rs7323144       T       G       .       PASS    AA=T;DP=113     GT:GQ:DP        0|0:59:18       0|1:100:18      0|0:100:70
+4      57534286        .       G       A       .       PASS    AA=G;DP=112     GT:GQ:DP        0|0:59:18       0|1:100:18      0|0:100:76
+3      77479931        .       C       G       .       PASS    AA=C;DP=91      GT:GQ:DP        0|0:59:18       0|1:100:19      0|0:100:50
+10     55422978        rs16937855      A       T       .       PASS    AA=A;DP=90      GT:GQ:DP        0|0:59:18       0|1:100:19      0|0:100:51
+2      193029525       .       A       C       .       PASS    AA=a;DP=114     GT:GQ:DP        0|0:59:18       0|1:100:19      0|0:100:71
+18     69610485        rs10514089      C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        0|0:59:18       0|1:100:20      0|0:100:37
+4      127296257       .       T       C       .       PASS    AA=T;DP=78      GT:GQ:DP        0|0:59:18       0|1:100:20      0|0:100:40
+5      119916131       rs55647516      A       G       .       PASS    AA=G;DP=78      GT:GQ:DP        0|0:59:18       0|1:100:20      0|0:100:40
+2      132117983       rs13417801      A       T       .       PASS    AA=a;DP=90      GT:GQ:DP        0|0:59:18       0|1:100:20      0|0:100:53
+5      152263815       rs34363107      T       C       .       PASS    AA=T;DP=92      GT:GQ:DP        0|0:59:18       0|1:100:20      0|0:100:54
+13     92455065        rs167390        T       A       .       PASS    AA=T;DP=100     GT:GQ:DP        0|0:59:18       0|1:100:20      0|0:100:58
+2      170541640       .       C       A       .       PASS    AA=C;DP=110     GT:GQ:DP        0|0:59:18       0|1:100:20      0|0:100:72
+21     40717860        rs17757217      T       A       .       PASS    AA=T;DP=79      GT:GQ:DP        0|0:59:18       0|1:100:20      0|0:87:29
+6      77409859        rs9352366       T       C       .       PASS    AA=C;DP=112     GT:GQ:DP        0|0:59:18       0|1:100:20      0|0:96:32
+6      102750289       .       A       T       .       PASS    AA=A;DP=125     GT:GQ:DP        0|0:59:18       0|1:100:21      0|0:100:39
+21     24537523        rs2828934       C       T       .       PASS    AA=c;DP=85      GT:GQ:DP        0|0:59:18       0|1:100:21      0|0:100:45
+2      54362516        .       A       G       .       PASS    AA=A;DP=86      GT:GQ:DP        0|0:59:18       0|1:100:21      0|0:100:46
+4      59340298        rs7669605       A       G       .       PASS    AA=A;DP=89      GT:GQ:DP        0|0:59:18       0|1:100:21      0|0:100:48
+2      156159396       rs843225        T       C       .       PASS    AA=C;DP=89      GT:GQ:DP        0|0:59:18       0|1:100:21      0|0:100:50
+6      94983966        rs9363163       G       C       .       PASS    AA=g;DP=95      GT:GQ:DP        0|0:59:18       0|1:100:21      0|0:100:60
+8      73292332        rs59861974      G       A       .       PASS    AA=g;DP=107     GT:GQ:DP        0|0:59:18       0|1:100:21      0|0:100:65
+1      105053061       rs6667903       G       A       .       PASS    AA=A;DP=109;HM2;HM3     GT:GQ:DP        0|0:59:18       0|1:100:21      0|0:100:69
+X      73554501        .       C       A       .       PASS    AA=C;DP=131     GT:GQ:DP        0|0:59:18       0|1:100:21      0|0:100:71
+X      128685957       rs17219868      A       G       .       PASS    AA=a;DP=122     GT:GQ:DP        0|0:59:18       0|1:100:22      0|0:100:39
+1      99745045        rs6689525       A       C       .       PASS    AA=A;DP=93;HM3  GT:GQ:DP        0|0:59:18       0|1:100:22      0|0:100:52
+9      11874852        rs12006517      A       G       .       PASS    AA=A;DP=99      GT:GQ:DP        0|0:59:18       0|1:100:22      0|0:100:58
+X      129377911       .       C       T       .       PASS    AA=C;DP=106     GT:GQ:DP        0|0:59:18       0|1:100:23      0|0:100:52
+18     285046  rs585955        G       T       .       PASS    AA=T;DP=102     GT:GQ:DP        0|0:59:18       0|1:100:23      0|0:100:63
+5      19819063        rs1498107       C       T       .       PASS    AA=c;DP=119     GT:GQ:DP        0|0:59:18       0|1:100:23      0|0:100:76
+4      116392932       rs62315467      A       G       .       PASS    AA=A;DP=77      GT:GQ:DP        0|0:59:18       0|1:100:23      0|0:81:27
+11     8843023 rs2653618       T       C       .       PASS    AA=T;DP=92      GT:GQ:DP        0|0:59:18       0|1:100:24      0|0:100:50
+3      5469191 .       T       A       .       PASS    AA=T;DP=97      GT:GQ:DP        0|0:59:18       0|1:100:24      0|0:100:58
+5      35866484        .       C       T       .       PASS    AA=c;DP=107     GT:GQ:DP        0|0:59:18       0|1:100:24      0|0:100:67
+11     51239650        rs61890263      G       A       .       PASS    AA=.;DP=92      GT:GQ:DP        0|0:59:18       0|1:100:25      0|0:100:49
+3      67269274        .       C       T       .       PASS    AA=C;DP=97      GT:GQ:DP        0|0:59:18       0|1:100:25      0|0:100:55
+4      116672266       rs11931918      A       T       .       PASS    AA=A;DP=100     GT:GQ:DP        0|0:59:18       0|1:100:25      0|0:100:58
+6      83679026        rs293487        G       A       .       PASS    AA=A;DP=105     GT:GQ:DP        0|0:59:18       0|1:100:25      0|0:100:60
+8      18277760        .       T       C       .       PASS    AA=.;DP=112     GT:GQ:DP        0|0:59:18       0|1:100:25      0|0:81:27
+8      113290599       rs12679948      G       T       .       PASS    AA=T;DP=77      GT:GQ:DP        0|0:59:18       0|1:100:25      0|0:96:33
+5      88844181        rs6863977       A       G       .       PASS    AA=A;DP=127     GT:GQ:DP        0|0:59:18       0|1:100:26      0|0:100:75
+X      134897221       .       C       A       .       PASS    AA=A;DP=103     GT:GQ:DP        0|0:59:18       0|1:100:26      0|0:63:21
+X      8789551 .       G       A       .       PASS    AA=G;DP=129     GT:GQ:DP        0|0:59:18       0|1:100:27      0|0:100:43
+9      128913916       rs1974291       G       A       .       PASS    AA=G;DP=122     GT:GQ:DP        0|0:59:18       0|1:100:27      0|0:100:76
+5      180495164       rs11249766      A       G       .       PASS    AA=a;DP=85      GT:GQ:DP        0|0:59:18       0|1:100:27      0|0:97:41
+7      84141705        .       A       G       .       PASS    AA=G;DP=109     GT:GQ:DP        0|0:59:18       0|1:100:28      0|0:100:64
+1      168825880       rs59597570      G       C       .       PASS    AA=G;DP=113     GT:GQ:DP        0|0:59:18       0|1:100:28      0|0:100:66
+2      229668585       rs13406030      C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        0|0:59:18       0|1:100:28      0|0:100:70
+7      94747104        rs17773481      C       G       .       PASS    AA=C;DP=127     GT:GQ:DP        0|0:59:18       0|1:100:28      0|0:100:79
+11     55207714        .       A       G       .       PASS    AA=a;DP=131     GT:GQ:DP        0|0:59:18       0|1:100:28      0|0:100:89
+2      63428323        .       G       T       .       PASS    AA=G;DP=121     GT:GQ:DP        0|0:59:18       0|1:100:29      0|0:100:75
+14     26957933        .       T       C       .       PASS    AA=T;DP=115     GT:GQ:DP        0|0:59:18       0|1:100:30      0|0:100:64
+9      21665436        .       T       G       .       PASS    AA=T;DP=119     GT:GQ:DP        0|0:59:18       0|1:100:31      0|0:100:70
+5      96376466        rs2303138       G       A       .       PASS    AA=G;DP=135     GT:GQ:DP        0|0:59:18       0|1:100:32      0|0:100:80
+X      66998651        .       G       A       .       PASS    AA=G;DP=114     GT:GQ:DP        0|0:59:18       0|1:100:32      0|0:96:32
+13     18594315        rs9511695       A       G       .       PASS    AA=N;DP=85      GT:GQ:DP        0|0:59:19       0|1:100:12      0|0:100:54
+6      69486083        rs12206222      A       G       .       PASS    AA=A;DP=107     GT:GQ:DP        0|0:59:19       0|1:100:14      0|0:100:75
+10     129082672       .       T       A       .       PASS    AA=T;DP=104     GT:GQ:DP        0|0:59:19       0|1:100:16      0|0:100:70
+13     87278241        .       T       C       .       PASS    AA=t;DP=71      GT:GQ:DP        0|0:59:19       0|1:100:16      0|0:81:28
+9      19624729        .       T       C       .       PASS    AA=T;DP=82      GT:GQ:DP        0|0:59:19       0|1:100:17      0|0:100:47
+10     95889923        rs2689691       C       T       .       PASS    AA=T;DP=89      GT:GQ:DP        0|0:59:19       0|1:100:18      0|0:100:53
+11     16160051        rs61560681      T       G       .       PASS    AA=T;DP=92      GT:GQ:DP        0|0:59:19       0|1:100:18      0|0:100:55
+6      54758608        .       A       G       .       PASS    AA=G;DP=97      GT:GQ:DP        0|0:59:19       0|1:100:18      0|0:100:60
+8      76974311        .       T       G       .       PASS    AA=T;DP=102     GT:GQ:DP        0|0:59:19       0|1:100:19      0|0:100:66
+3      29357358        rs6549927       T       C       .       PASS    AA=T;DP=84      GT:GQ:DP        0|0:59:19       0|1:100:20      0|0:100:43
+2      103597517       rs17029022      G       A       .       PASS    AA=G;DP=97      GT:GQ:DP        0|0:59:19       0|1:100:20      0|0:100:58
+18     2919695 .       G       C       .       PASS    AA=G;DP=100     GT:GQ:DP        0|0:59:19       0|1:100:21      0|0:100:57
+5      135134840       rs35598179      G       A       .       PASS    AA=g;DP=106     GT:GQ:DP        0|0:59:19       0|1:100:22      0|0:100:67
+3      119112381       rs9859501       T       C       .       PASS    AA=T;DP=108     GT:GQ:DP        0|0:59:19       0|1:100:22      0|0:100:72
+9      26566117        rs964855        C       T       .       PASS    AA=C;DP=129     GT:GQ:DP        0|0:59:19       0|1:100:22      0|0:100:88
+2      208702075       rs3820906       A       G       .       PASS    AA=a;DP=95      GT:GQ:DP        0|0:59:19       0|1:100:23      0|0:100:40
+2      163461845       rs982445        A       T       .       PASS    AA=A;DP=88      GT:GQ:DP        0|0:59:19       0|1:100:23      0|0:100:46
+2      232627213       .       G       T       .       PASS    AA=G;DP=137     GT:GQ:DP        0|0:59:19       0|1:100:25      0|0:100:47
+19     34442389        .       C       T       .       PASS    AA=C;DP=124     GT:GQ:DP        0|0:59:19       0|1:100:26      0|0:100:79
+3      22697841        .       T       C       .       PASS    AA=T;DP=114     GT:GQ:DP        0|0:59:19       0|1:100:27      0|0:100:70
+7      69530211        rs6946732       G       A       .       PASS    AA=A;DP=119     GT:GQ:DP        0|0:59:19       0|1:100:27      0|0:100:74
+4      26287492        .       C       T       .       PASS    AA=C;DP=116     GT:GQ:DP        0|0:59:19       0|1:100:27      0|0:58:31
+4      105112265       .       C       T       .       PASS    AA=C;DP=114     GT:GQ:DP        0|0:59:19       0|1:100:28      0|0:100:66
+7      39571195        rs7786929       T       A       .       PASS    AA=T;DP=79      GT:GQ:DP        0|0:59:19       1|0:100:12      0|1:100:48
+3      134858702       .       A       G       .       PASS    AA=A;DP=75      GT:GQ:DP        0|0:59:19       1|0:100:13      0|1:100:30
+6      103372465       rs9373657       T       C       .       PASS    AA=C;DP=77      GT:GQ:DP        0|0:59:19       1|0:100:13      0|1:100:31
+14     95688493        rs11850303      A       C       .       PASS    AA=A;DP=73      GT:GQ:DP        0|0:59:19       1|0:100:14      0|1:100:28
+19     20940458        rs10854040      C       T       .       PASS    AA=T;DP=80      GT:GQ:DP        0|0:59:19       1|0:100:15      0|1:100:33
+10     85509570        rs501385        G       T       .       PASS    AA=T;DP=87      GT:GQ:DP        0|0:59:19       1|0:100:15      0|1:100:52
+8      78813988        rs16939554      T       C       .       PASS    AA=T;DP=75      GT:GQ:DP        0|0:59:19       1|0:100:16      0|1:100:39
+1      194305835       rs61820459      C       T       .       PASS    AA=C;DP=86      GT:GQ:DP        0|0:59:19       1|0:100:16      0|1:100:50
+14     72034443        rs10138138      C       T       .       PASS    AA=C;DP=91      GT:GQ:DP        0|0:59:19       1|0:100:16      0|1:100:57
+5      161696235       rs59519942      C       T       .       PASS    AA=C;DP=82      GT:GQ:DP        0|0:59:19       1|0:100:17      0|1:100:47
+11     46011139        rs61882541      G       A       .       PASS    AA=G;DP=90      GT:GQ:DP        0|0:59:19       1|0:100:17      0|1:100:53
+4      16721698        .       C       T       .       PASS    AA=N;DP=91      GT:GQ:DP        0|0:59:19       1|0:100:17      0|1:100:54
+2      207101565       rs57644004      C       T       .       PASS    AA=C;DP=99      GT:GQ:DP        0|0:59:19       1|0:100:17      0|1:100:60
+2      198602582       .       C       T       .       PASS    AA=C;DP=97      GT:GQ:DP        0|0:59:19       1|0:100:17      0|1:100:61
+16     18939821        rs28872596      G       A       .       PASS    AA=G;DP=103     GT:GQ:DP        0|0:59:19       1|0:100:17      0|1:100:67
+4      139768298       rs6846506       C       T       .       PASS    AA=C;DP=76      GT:GQ:DP        0|0:59:19       1|0:100:18      0|1:100:27
+14     27531580        rs4474624       T       A       .       PASS    AA=T;DP=78      GT:GQ:DP        0|0:59:19       1|0:100:18      0|1:100:41
+11     98062228        rs2512851       T       G       .       PASS    AA=T;DP=89      GT:GQ:DP        0|0:59:19       1|0:100:18      0|1:100:53
+10     65930895        .       G       A       .       PASS    AA=A;DP=105     GT:GQ:DP        0|0:59:19       1|0:100:18      0|1:100:67
+17     66501583        rs17823999      C       G       .       PASS    AA=C;DP=106     GT:GQ:DP        0|0:59:19       1|0:100:18      0|1:100:67
+8      14437204        rs6986539       A       C       .       PASS    AA=A;DP=74      GT:GQ:DP        0|0:59:19       1|0:100:19      0|1:100:27
+10     52712136        .       G       T       .       PASS    AA=g;DP=86      GT:GQ:DP        0|0:59:19       1|0:100:19      0|1:100:37
+14     39210581        .       A       G       .       PASS    AA=A;DP=92      GT:GQ:DP        0|0:59:19       1|0:100:19      0|1:100:54
+5      51463675        rs9291956       T       C       .       PASS    AA=T;DP=94      GT:GQ:DP        0|0:59:19       1|0:100:19      0|1:100:57
+13     54286685        rs4885433       T       A       .       PASS    AA=T;DP=105     GT:GQ:DP        0|0:59:19       1|0:100:19      0|1:100:61
+4      173206255       rs9312516       A       G       .       PASS    AA=A;DP=104     GT:GQ:DP        0|0:59:19       1|0:100:19      0|1:100:64
+7      124430390       .       A       G       .       PASS    AA=A;DP=111     GT:GQ:DP        0|0:59:19       1|0:100:19      0|1:100:66
+9      2256838 rs16923611      T       G       .       PASS    AA=T;DP=108     GT:GQ:DP        0|0:59:19       1|0:100:19      0|1:100:70
+12     125220609       rs7294867       T       C       .       PASS    AA=T;DP=89      GT:GQ:DP        0|0:59:19       1|0:100:20      0|1:100:24
+1      161488866       rs12743427      G       A       .       PASS    AA=A;DP=89;HM2;HM3      GT:GQ:DP        0|0:59:19       1|0:100:20      0|1:100:53
+14     21391620        rs12892925      G       C       .       PASS    AA=G;DP=94      GT:GQ:DP        0|0:59:19       1|0:100:20      0|1:100:56
+15     58497292        .       G       T       .       PASS    AA=G;DP=107     GT:GQ:DP        0|0:59:19       1|0:100:20      0|1:100:70
+18     73762402        .       A       G       .       PASS    AA=A;DP=108     GT:GQ:DP        0|0:59:19       1|0:100:20      0|1:100:72
+12     53533110        rs979523        T       A       .       PASS    AA=C;DP=114     GT:GQ:DP        0|0:59:19       1|0:100:20      0|1:100:78
+8      58359049        rs10504229      A       G       .       PASS    AA=N;DP=84      GT:GQ:DP        0|0:59:19       1|0:100:21      0|1:100:45
+8      110103424       rs56091915      C       T       .       PASS    AA=C;DP=91      GT:GQ:DP        0|0:59:19       1|0:100:21      0|1:100:47
+17     56382407        rs61205194      G       T       .       PASS    AA=G;DP=92      GT:GQ:DP        0|0:59:19       1|0:100:21      0|1:100:56
+6      154237640       rs681194        A       T       .       PASS    AA=A;DP=98      GT:GQ:DP        0|0:59:19       1|0:100:21      0|1:100:56
+8      87677332        .       T       A       .       PASS    AA=T;DP=99      GT:GQ:DP        0|0:59:19       1|0:100:21      0|1:100:57
+7      158540503       .       C       T       .       PASS    AA=C;DP=101     GT:GQ:DP        0|0:59:19       1|0:100:21      0|1:100:59
+13     30461615        .       C       T       .       PASS    AA=T;DP=84      GT:GQ:DP        0|0:59:19       1|0:100:22      0|1:100:45
+12     22770383        .       C       T       .       PASS    AA=c;DP=87      GT:GQ:DP        0|0:59:19       1|0:100:22      0|1:100:46
+4      112830455       rs2218817       G       A       .       PASS    AA=G;DP=93      GT:GQ:DP        0|0:59:19       1|0:100:22      0|1:100:51
+2      207615714       rs6714490       A       G       .       PASS    AA=A;DP=93      GT:GQ:DP        0|0:59:19       1|0:100:22      0|1:100:53
+13     75693254        rs9573816       G       T       .       PASS    AA=g;DP=105     GT:GQ:DP        0|0:59:19       1|0:100:22      0|1:100:62
+4      106391900       rs10006721      A       G       .       PASS    AA=A;DP=104     GT:GQ:DP        0|0:59:19       1|0:100:22      0|1:100:63
+8      5589804 rs1398475       A       G       .       PASS    AA=A;DP=109     GT:GQ:DP        0|0:59:19       1|0:100:22      0|1:100:65
+3      175059379       .       G       A       .       PASS    AA=A;DP=137     GT:GQ:DP        0|0:59:19       1|0:100:22      0|1:100:76
+10     2608934 rs61836102      G       A       .       PASS    AA=A;DP=116     GT:GQ:DP        0|0:59:19       1|0:100:23      0|1:100:28
+18     28895626        rs272944        A       G       .       PASS    AA=A;DP=88      GT:GQ:DP        0|0:59:19       1|0:100:23      0|1:100:34
+15     22411316        .       A       G       .       PASS    AA=A;DP=92      GT:GQ:DP        0|0:59:19       1|0:100:23      0|1:100:43
+2      76376415        .       A       T       .       PASS    AA=A;DP=99      GT:GQ:DP        0|0:59:19       1|0:100:23      0|1:100:58
+14     81847426        .       G       C       .       PASS    AA=G;DP=95      GT:GQ:DP        0|0:59:19       1|0:100:24      0|1:100:53
+9      25906648        rs1319666       T       C       .       PASS    AA=T;DP=109     GT:GQ:DP        0|0:59:19       1|0:100:25      0|1:100:66
+3      144744018       rs4839600       A       C       .       PASS    AA=C;DP=99      GT:GQ:DP        0|0:59:19       1|0:100:26      0|1:100:55
+2      67706340        rs6721459       A       G       .       PASS    AA=A;DP=102     GT:GQ:DP        0|0:59:19       1|0:100:26      0|1:100:56
+4      177857944       rs3775196       A       G       .       PASS    AA=G;DP=107     GT:GQ:DP        0|0:59:19       1|0:100:27      0|1:100:59
+13     90833074        rs9523318       A       G       .       PASS    AA=A;DP=132     GT:GQ:DP        0|0:59:19       1|0:100:27      0|1:100:74
+9      9462883 rs2026984       T       C       .       PASS    AA=T;DP=87      GT:GQ:DP        0|0:59:19       1|0:100:28      0|1:100:41
+X      14429697        rs7056276       C       T       .       PASS    AA=c;DP=136     GT:GQ:DP        0|0:59:19       1|0:100:28      0|1:100:48
+13     64054018        rs17088537      A       G       .       PASS    AA=A;DP=99      GT:GQ:DP        0|0:59:19       1|0:100:28      0|1:100:53
+6      24397281        .       A       G       .       PASS    AA=A;DP=130     GT:GQ:DP        0|0:59:19       1|0:100:29      0|1:100:79
+X      144371277       .       T       C       .       PASS    AA=T;DP=134     GT:GQ:DP        0|0:59:19       1|0:100:30      0|1:100:37
+8      140626462       .       G       A       .       PASS    AA=G;DP=137     GT:GQ:DP        0|0:59:19       1|0:100:31      0|1:100:37
+6      72615301        rs1536766       G       C       .       PASS    AA=G;DP=122     GT:GQ:DP        0|0:59:19       1|0:100:31      0|1:100:63
+9      137122645       rs62573440      G       A       .       PASS    AA=G;DP=117     GT:GQ:DP        0|0:59:19       1|0:100:31      0|1:100:67
+9      135990664       .       G       A       .       PASS    AA=g;DP=59      GT:GQ:DP        0|0:59:19       1|0:10:4        0|1:80:29
+16     72364445        rs56139326      G       A       .       PASS    AA=g;DP=78      GT:GQ:DP        0|0:59:19       1|0:12:11       0|1:100:36
+9      14145623        .       T       C       .       PASS    AA=T;DP=83      GT:GQ:DP        0|0:59:19       1|0:16:16       0|1:100:32
+1      74359575        .       T       C       .       PASS    AA=T;DP=94      GT:GQ:DP        0|0:59:19       1|0:25:17       0|1:100:57
+4      179758936       rs6552305       A       G       .       PASS    AA=A;DP=85      GT:GQ:DP        0|0:59:19       1|0:27:6        0|1:100:61
+7      145568259       .       C       T       .       PASS    AA=C;DP=103     GT:GQ:DP        0|0:59:19       1|0:30:21       0|1:100:60
+17     9722134 rs8077989       C       G       .       PASS    AA=C;DP=98      GT:GQ:DP        0|0:59:19       1|0:50:16       0|1:100:65
+2      212064247       .       T       C       .       PASS    AA=T;DP=99      GT:GQ:DP        0|0:59:19       1|0:56:16       0|1:100:67
+5      126993013       rs34700780      C       T       .       PASS    AA=C;DP=88      GT:GQ:DP        0|0:59:19       1|0:56:21       0|1:100:49
+19     33223500        rs55654593      C       T       .       PASS    AA=C;DP=117     GT:GQ:DP        0|0:59:19       1|0:56:24       0|1:100:74
+4      59671755        rs12499567      C       T       .       PASS    AA=C;DP=72      GT:GQ:DP        0|0:59:19       1|0:61:17       0|1:100:25
+10     133689466       rs1977495       G       T       .       PASS    AA=T;DP=113     GT:GQ:DP        0|0:59:19       1|0:61:17       0|1:100:76
+1      18525026        rs12725852      A       C       .       PASS    AA=A;DP=80      GT:GQ:DP        0|0:59:19       1|0:64:15       0|1:100:40
+10     8118580 rs10905275      G       A       .       PASS    AA=G;DP=75      GT:GQ:DP        0|0:59:19       1|0:66:14       0|1:100:43
+2      211586357       .       T       C       .       PASS    AA=T;DP=82      GT:GQ:DP        0|0:59:19       1|0:68:14       0|1:100:47
+8      139242201       rs16908382      G       A       .       PASS    AA=G;DP=94      GT:GQ:DP        0|0:59:19       1|0:68:20       0|1:100:55
+18     36444559        rs17733038      T       C       .       PASS    AA=T;DP=89      GT:GQ:DP        0|0:59:19       1|0:73:16       0|1:100:54
+4      167826186       rs10006678      T       A       .       PASS    AA=t;DP=70      GT:GQ:DP        0|0:59:19       1|0:75:13       0|1:100:30
+8      63241003        .       C       T       .       PASS    AA=c;DP=102     GT:GQ:DP        0|0:59:19       1|0:77:15       0|1:100:69
+12     57190885        .       C       A       .       PASS    AA=C;DP=133     GT:GQ:DP        0|0:59:19       1|0:77:26       0|1:100:92
+3      106353776       .       C       T       .       PASS    AA=C;DP=81      GT:GQ:DP        0|0:59:19       1|0:78:17       0|1:100:48
+4      137214038       .       C       T       .       PASS    AA=C;DP=81      GT:GQ:DP        0|0:59:19       1|0:79:20       0|1:100:43
+2      138978960       rs7587753       C       T       .       PASS    AA=C;DP=79      GT:GQ:DP        0|0:59:19       1|0:80:15       0|1:94:25
+14     21016375        rs12435421      A       G       .       PASS    AA=a;DP=120     GT:GQ:DP        0|0:59:19       1|0:80:20       0|1:100:44
+6      67856154        rs2444706       T       C       .       PASS    AA=T;DP=83      GT:GQ:DP        0|0:59:19       1|0:80:22       0|1:100:32
+12     80331495        .       T       A       .       PASS    AA=T;DP=120     GT:GQ:DP        0|0:59:19       1|0:81:19       0|1:100:78
+20     29501773        rs6120312       G       A       .       PASS    AA=G;DP=102     GT:GQ:DP        0|0:59:19       1|0:82:16       0|1:100:68
+8      13130312        .       A       T       .       PASS    AA=A;DP=92      GT:GQ:DP        0|0:59:19       1|0:84:15       0|1:100:55
+4      174891143       rs60665471      A       G       .       PASS    AA=A;DP=92      GT:GQ:DP        0|0:59:19       1|0:90:18       0|1:100:54
+15     34599462        rs12905529      A       G       .       PASS    AA=G;DP=80      GT:GQ:DP        0|0:59:19       1|0:93:15       0|1:100:34
+X      29240901        rs4893612       C       G       .       PASS    AA=c;DP=96      GT:GQ:DP        0|0:59:19       1|0:93:17       0|1:100:37
+2      106908906       rs12464644      T       C       .       PASS    AA=T;DP=74      GT:GQ:DP        0|0:59:19       1|0:94:10       0|1:100:45
+9      98335615        rs16911110      A       G       .       PASS    AA=A;DP=88      GT:GQ:DP        0|0:59:19       1|0:94:16       0|1:100:54
+13     73058503        .       A       G       .       PASS    AA=A;DP=88      GT:GQ:DP        0|0:59:19       1|0:94:18       0|1:100:51
+12     71898362        .       T       C       .       PASS    AA=T;DP=93      GT:GQ:DP        0|0:59:19       1|0:95:18       0|1:100:58
+11     39300562        rs12293376      C       T       .       PASS    AA=C;DP=71      GT:GQ:DP        0|0:59:19       1|0:97:17       0|1:100:30
+12     64331825        .       T       C       .       PASS    AA=T;DP=117     GT:GQ:DP        0|0:59:19       1|0:97:23       0|1:100:76
+2      78684739        rs17015502      T       C       .       PASS    AA=T;DP=76      GT:GQ:DP        0|0:59:19       1|0:98:11       0|1:100:47
+11     104597178       .       G       A       .       PASS    AA=G;DP=82      GT:GQ:DP        0|0:59:20       0|1:100:13      0|0:100:50
+2      142530696       rs12618881      T       A       .       PASS    AA=A;DP=92      GT:GQ:DP        0|0:59:20       0|1:100:16      0|0:100:56
+1      214791230       rs11117614      G       C       .       PASS    AA=G;DP=96      GT:GQ:DP        0|0:59:20       0|1:100:19      0|0:100:57
+2      141946131       rs62166281      C       T       .       PASS    AA=C;DP=112     GT:GQ:DP        0|0:59:20       0|1:100:21      0|0:100:72
+5      53382951        .       G       A       .       PASS    AA=A;DP=137     GT:GQ:DP        0|0:59:20       0|1:100:25      0|0:100:50
+2      40639241        rs56212220      G       T       .       PASS    AA=G;DP=114     GT:GQ:DP        0|0:59:20       0|1:100:25      0|0:100:64
+5      94880721        .       T       C       .       PASS    AA=T;DP=79      GT:GQ:DP        0|0:59:20       1|0:100:15      0|1:100:45
+8      138537196       .       T       C       .       PASS    AA=T;DP=75      GT:GQ:DP        0|0:59:20       1|0:100:16      0|1:100:41
+1      192493363       .       C       A       .       PASS    AA=C;DP=82      GT:GQ:DP        0|0:59:20       1|0:100:19      0|1:92:44
+2      70624728        .       T       C       .       PASS    AA=T;DP=90      GT:GQ:DP        0|0:59:20       1|0:100:20      0|1:100:42
+3      119400190       .       C       G       .       PASS    AA=C;DP=88      GT:GQ:DP        0|0:59:20       1|0:100:21      0|1:100:47
+3      22573754        rs13076690      T       G       .       PASS    AA=T;DP=84      GT:GQ:DP        0|0:59:20       1|0:100:22      0|1:100:32
+8      135688456       rs4909310       G       C       .       PASS    AA=G;DP=83      GT:GQ:DP        0|0:59:20       1|0:100:22      0|1:100:41
+6      169116446       rs9455823       T       C       .       PASS    AA=T;DP=97      GT:GQ:DP        0|0:59:20       1|0:100:22      0|1:100:49
+2      16845278        .       T       C       .       PASS    AA=T;DP=92      GT:GQ:DP        0|0:59:20       1|0:100:22      0|1:100:51
+3      149842736       rs9811115       T       G       .       PASS    AA=T;DP=107     GT:GQ:DP        0|0:59:20       1|0:100:22      0|1:100:62
+8      24599624        rs4270972       G       C       .       PASS    AA=G;DP=125     GT:GQ:DP        0|0:59:20       1|0:100:22      0|1:100:86
+5      134095298       rs6878096       G       A       .       PASS    AA=G;DP=115     GT:GQ:DP        0|0:59:20       1|0:100:23      0|1:100:71
+16     6286038 rs60856919      G       A       .       PASS    AA=A;DP=113     GT:GQ:DP        0|0:59:20       1|0:100:24      0|1:100:69
+15     48673785        rs644890        C       T       .       PASS    AA=T;DP=96      GT:GQ:DP        0|0:59:20       1|0:100:25      0|1:100:40
+8      72996365        rs10111026      C       A       .       PASS    AA=C;DP=106     GT:GQ:DP        0|0:59:20       1|0:100:25      0|1:100:50
+16     63905094        rs1364084       C       T       .       PASS    AA=C;DP=102     GT:GQ:DP        0|0:59:20       1|0:100:25      0|1:100:55
+5      14332384        rs7730037       A       G       .       PASS    AA=A;DP=101     GT:GQ:DP        0|0:59:20       1|0:100:26      0|1:100:50
+7      8667520 rs10277946      C       T       .       PASS    AA=C;DP=109     GT:GQ:DP        0|0:59:20       1|0:100:32      0|1:100:59
+7      118757053       .       A       T       .       PASS    AA=A;DP=99      GT:GQ:DP        0|0:59:20       1|0:50:21       0|1:100:60
+8      139355015       .       C       T       .       PASS    AA=C;DP=89      GT:GQ:DP        0|0:59:20       1|0:60:20       0|1:100:41
+6      63061419        .       T       C       .       PASS    AA=T;DP=97      GT:GQ:DP        0|0:59:20       1|0:66:19       0|1:100:58
+13     81969815        rs9546150       A       G       .       PASS    AA=A;DP=87      GT:GQ:DP        0|0:59:20       1|0:67:16       0|1:100:51
+14     20058789        rs57252694      C       T       .       PASS    AA=C;DP=92      GT:GQ:DP        0|0:59:20       1|0:82:14       0|1:100:56
+4      167171724       .       T       C       .       PASS    AA=T;DP=117     GT:GQ:DP        0|0:59:20       1|0:82:22       0|1:100:31
+X      99718877        .       A       T       .       PASS    AA=A;DP=133     GT:GQ:DP        0|0:59:20       1|0:83:28       0|1:100:52
+22     48921933        rs59051343      T       C       .       PASS    AA=C;DP=68      GT:GQ:DP        0|0:59:20       1|0:91:15       0|1:71:25
+2      153871412       rs13006240      C       T       .       PASS    AA=C;DP=87      GT:GQ:DP        0|0:59:20       1|0:94:17       0|1:100:49
+3      100070802       .       T       C       .       PASS    AA=T;DP=104     GT:GQ:DP        0|0:59:20       1|0:97:24       0|1:100:59
+4      188153191       rs61510736      A       T       .       PASS    AA=T;DP=93      GT:GQ:DP        0|0:59:20       1|0:99:19       0|1:100:57
+3      10637920        rs6796233       G       C       .       PASS    AA=G;DP=123     GT:GQ:DP        0|0:59:21       0|1:100:17      0|0:100:85
+11     112441291       .       G       A       .       PASS    AA=G;DP=87      GT:GQ:DP        0|0:59:21       1|0:100:18      0|1:100:48
+6      120317292       .       A       G       .       PASS    AA=A;DP=95      GT:GQ:DP        0|0:59:21       1|0:100:20      0|1:100:52
+1      162693695       rs1338631       G       A       .       PASS    AA=G;DP=89;HM2  GT:GQ:DP        0|0:59:21       1|0:100:21      0|1:100:47
+6      65441483        rs9360024       A       G       .       PASS    AA=T;DP=78      GT:GQ:DP        0|0:59:21       1|0:100:23      0|1:100:28
+8      119259574       .       C       T       .       PASS    AA=C;DP=107     GT:GQ:DP        0|0:59:21       1|0:100:24      0|1:100:62
+6      82130536        rs1857306       T       A       .       PASS    AA=T;DP=109     GT:GQ:DP        0|0:59:21       1|0:100:24      0|1:100:66
+7      79802902        .       G       C       .       PASS    AA=G;DP=96      GT:GQ:DP        0|0:59:21       1|0:100:25      0|1:100:51
+5      147417300       rs7706528       C       T       .       PASS    AA=c;DP=122     GT:GQ:DP        0|0:59:21       1|0:100:26      0|1:100:75
+12     64849838        rs57096084      C       T       .       PASS    AA=C;DP=90      GT:GQ:DP        0|0:59:21       1|0:20:13       0|1:100:42
+11     1072857 rs11245931      A       G       .       PASS    AA=a;DP=92      GT:GQ:DP        0|0:59:21       1|0:36:7        0|1:100:64
+9      5020919 rs7023796       T       C       .       PASS    AA=T;DP=87      GT:GQ:DP        0|0:59:21       1|0:68:17       0|1:100:47
+5      57400783        .       C       T       .       PASS    AA=c;DP=79      GT:GQ:DP        0|0:59:21       1|0:72:13       0|1:100:41
+18     3062704 rs8099364       C       T       .       PASS    AA=A;DP=85      GT:GQ:DP        0|0:59:22       1|0:81:16       0|1:100:34
+2      39379302        .       C       A       .       PASS    AA=C;DP=107     GT:GQ:DP        0|0:59:24       0|1:100:19      0|0:100:64
+18     40451200        rs4414576       A       C       .       PASS    AA=A;DP=94      GT:GQ:DP        0|0:59:24       0|1:100:21      0|0:72:24
+10     133730279       rs61383942      T       C       .       PASS    AA=T;DP=130     GT:GQ:DP        0|0:59:24       1|0:100:22      0|1:100:85
+10     106341252       rs4918116       A       C       .       PASS    AA=C;DP=120     GT:GQ:DP        0|0:59:25       0|1:100:22      0|0:100:76
+3      11329549        .       A       G       .       PASS    AA=A;DP=101     GT:GQ:DP        0|0:59:25       1|0:100:23      0|1:100:52
+18     47414371        rs4940111       A       G       .       PASS    AA=A;DP=118     GT:GQ:DP        0|0:59:25       1|1:79:28       0|1:100:68
+11     73790401        rs2509531       C       T       .       PASS    AA=C;DP=107     GT:GQ:DP        0|0:59:26       1|0:100:27      0|1:100:51
+21     21945195        rs57003042      C       A       .       PASS    AA=A;DP=93      GT:GQ:DP        0|0:59:26       1|0:93:12       0|1:100:56
+11     13945901        .       C       A       .       PASS    AA=C;DP=101     GT:GQ:DP        0|0:59:26       1|1:52:25       0|1:100:49
+13     33362707        rs17080079      T       C       .       PASS    AA=T;DP=125     GT:GQ:DP        0|0:59:27       0|1:100:23      0|0:100:64
+1      154875775       .       G       A       .       PASS    AA=G;DP=139     GT:GQ:DP        0|0:59:27       0|1:100:25      0|0:100:85
+9      14742367        .       G       T       .       PASS    AA=G;DP=131     GT:GQ:DP        0|0:59:27       0|1:100:28      0|0:100:79
+1      72185818        .       G       A       .       PASS    AA=A;DP=107     GT:GQ:DP        0|0:59:27       1|0:100:21      0|1:100:58
+21     40007570        rs59990779      A       G       .       PASS    AA=A;DP=136     GT:GQ:DP        0|0:59:27       1|0:100:24      0|1:100:86
+1      40228413        rs6657957       T       A       .       PASS    AA=T;DP=75      GT:GQ:DP        0|0:59:27       1|0:87:13       0|1:100:29
+3      192354918       .       G       A       .       PASS    AA=A;DP=87      GT:GQ:DP        0|0:59:27       1|1:31:19       0|1:100:28
+11     23538812        rs7124124       C       T       .       PASS    AA=C;DP=97      GT:GQ:DP        0|0:59:28       1|0:77:17       0|1:100:52
+9      116013094       rs34350265      C       T       .       PASS    AA=C;DP=97      GT:GQ:DP        0|0:59:31       1|0:3:11        0|1:100:55
+7      92370909        rs10953075      A       C       .       PASS    AA=A;DP=112     GT:GQ:DP        0|0:59:31       1|1:43:16       0|1:100:63
+9      96721684        .       A       G       .       PASS    AA=a;DP=127     GT:GQ:DP        0|0:59:31       1|1:58:22       0|1:100:73
+3      193139174       .       G       T       .       PASS    AA=G;DP=108     GT:GQ:DP        0|0:60:20       0|1:100:27      0|0:100:60
+3      26079080        rs28700917      A       G       .       PASS    AA=A;DP=87      GT:GQ:DP        0|0:60:20       1|1:19:15       0|1:100:52
+8      60343799        rs7812828       A       G       .       PASS    AA=A;DP=109     GT:GQ:DP        0|0:60:20       1|1:20:13       0|1:100:76
+5      2575695 rs373670        C       T       .       PASS    AA=C;DP=98      GT:GQ:DP        0|0:60:20       1|1:28:11       0|1:100:68
+17     8557555 rs7214061       A       G       .       PASS    AA=A;DP=79      GT:GQ:DP        0|0:60:20       1|1:30:17       0|1:100:30
+9      16212897        rs9406591       T       G       .       PASS    AA=T;DP=103     GT:GQ:DP        0|0:60:20       1|1:33:22       0|1:100:63
+13     18521665        rs17078952      C       T       .       PASS    AA=a;DP=115     GT:GQ:DP        0|0:60:20       1|1:34:14       0|1:100:33
+8      111889567       rs61507597      G       A       .       PASS    AA=A;DP=94      GT:GQ:DP        0|0:60:20       1|1:34:19       0|1:100:55
+7      117060639       rs10246649      G       A       .       PASS    AA=-;DP=87      GT:GQ:DP        0|0:60:20       1|1:37:14       0|1:100:52
+6      79828693        rs55786726      C       T       .       PASS    AA=C;DP=96      GT:GQ:DP        0|0:60:20       1|1:37:14       0|1:100:63
+9      104186704       rs10760887      A       G       .       PASS    AA=A;DP=86      GT:GQ:DP        0|0:60:20       1|1:37:15       0|1:100:51
+21     37863303        rs11910775      G       A       .       PASS    AA=G;DP=103     GT:GQ:DP        0|0:60:20       1|1:37:15       0|1:100:71
+5      20270403        rs7729704       A       G       .       PASS    AA=A;DP=81      GT:GQ:DP        0|0:60:20       1|1:37:16       0|1:100:36
+6      56406438        rs6917087       C       T       .       PASS    AA=T;DP=90      GT:GQ:DP        0|0:60:20       1|1:37:19       0|1:100:51
+4      115490645       .       A       G       .       PASS    AA=A;DP=98      GT:GQ:DP        0|0:60:20       1|1:37:21       0|1:100:57
+7      14562579        rs2116312       C       T       .       PASS    AA=T;DP=64      GT:GQ:DP        0|0:60:20       1|1:40:15       0|1:100:29
+4      160303853       rs7681750       A       G       .       PASS    AA=A;DP=98      GT:GQ:DP        0|0:60:20       1|1:40:15       0|1:100:47
+7      96235077        rs2922923       T       C       .       PASS    AA=C;DP=82      GT:GQ:DP        0|0:60:20       1|1:40:15       0|1:100:47
+11     68575780        rs11228458      C       T       .       PASS    AA=c;DP=118     GT:GQ:DP        0|0:60:20       1|1:43:17       0|1:100:76
+21     40075924        rs4816658       A       T       .       PASS    AA=T;DP=109     GT:GQ:DP        0|0:60:20       1|1:44:23       0|1:100:66
+21     24355112        rs2256435       C       T       .       PASS    AA=C;DP=74      GT:GQ:DP        0|0:60:20       1|1:46:17       0|1:100:28
+X      106707892       rs5962856       G       A       .       PASS    AA=A;DP=121     GT:GQ:DP        0|0:60:20       1|1:46:17       0|1:100:50
+6      166517451       rs3099278       A       C       .       PASS    AA=C;DP=104     GT:GQ:DP        0|0:60:20       1|1:46:17       0|1:100:70
+17     29572637        .       G       A       .       PASS    AA=G;DP=100     GT:GQ:DP        0|0:60:20       1|1:46:18       0|1:100:61
+1      81824930        rs17106740      G       A       .       PASS    AA=T;DP=103;HM2 GT:GQ:DP        0|0:60:20       1|1:49:18       0|1:100:21
+2      99168232        rs6756650       T       C       .       PASS    AA=C;DP=86      GT:GQ:DP        0|0:60:20       1|1:49:18       0|1:100:48
+13     37775599        rs655077        G       T       .       PASS    AA=T;DP=113     GT:GQ:DP        0|0:60:20       1|1:49:18       0|1:100:76
+11     4637806 rs12277012      C       G       .       PASS    AA=C;DP=92      GT:GQ:DP        0|0:60:20       1|1:49:19       0|1:100:54
+4      149629769       rs10519970      C       A       .       PASS    AA=A;DP=96      GT:GQ:DP        0|0:60:20       1|1:52:19       0|1:100:45
+7      138100638       rs4732330       C       T       .       PASS    AA=C;DP=99      GT:GQ:DP        0|0:60:20       1|1:52:19       0|1:100:60
+8      120456581       .       G       A       .       PASS    AA=G;DP=83      GT:GQ:DP        0|0:60:20       1|1:52:20       0|1:100:32
+3      33578646        .       C       A       .       PASS    AA=C;DP=120     GT:GQ:DP        0|0:60:20       1|1:58:26       0|1:100:75
+12     45660990        rs2522256       G       A       .       PASS    AA=A;DP=94      GT:GQ:DP        0|0:60:20       1|1:61:22       0|1:100:51
+11     50117560        rs7129115       A       C       .       PASS    AA=C;DP=96      GT:GQ:DP        0|0:60:20       1|1:64:23       0|1:100:53
+X      111742810       rs5974087       C       T       .       PASS    AA=C;DP=125     GT:GQ:DP        0|0:60:20       1|1:67:24       0|1:100:42
+12     59465327        rs12300404      C       A       .       PASS    AA=C;DP=123     GT:GQ:DP        0|0:60:20       1|1:70:25       0|1:100:24
+14     48460858        rs10133773      G       A       .       PASS    AA=G;DP=108     GT:GQ:DP        0|0:60:20       1|1:70:26       0|1:100:61
+6      130144652       rs9321180       C       T       .       PASS    AA=C;DP=101     GT:GQ:DP        0|0:60:20       1|1:73:27       0|1:100:54
+2      188890045       rs35196443      C       T       .       PASS    AA=T;DP=108     GT:GQ:DP        0|0:60:20       1|1:79:28       0|1:100:61
+12     72134780        .       C       T       .       PASS    AA=C;DP=103     GT:GQ:DP        0|0:60:20       1|1:85:30       0|1:100:54
+X      118659972       rs11797680      G       A       .       PASS    AA=A;DP=127     GT:GQ:DP        0|0:60:20       1|1:91:33       0|1:100:49
+4      73497816        rs10938018      A       C       .       PASS    AA=C;DP=81      GT:GQ:DP        0|0:60:21       1|1:13:12       0|1:100:47
+8      19919680        rs6997787       T       C       .       PASS    AA=T;DP=109     GT:GQ:DP        0|0:60:21       1|1:31:23       0|1:100:69
+X      83809380        rs1831115       A       G       .       PASS    AA=G;DP=90      GT:GQ:DP        0|0:60:21       1|1:32:21       0|1:100:34
+16     58936260        rs62048700      C       T       .       PASS    AA=C;DP=108     GT:GQ:DP        0|0:60:21       1|1:34:22       0|1:100:63
+3      176904935       rs4383533       G       A       .       PASS    AA=A;DP=60      GT:GQ:DP        0|0:60:21       1|1:37:14       0|1:100:20
+5      164163034       rs2963128       A       G       .       PASS    AA=A;DP=80      GT:GQ:DP        0|0:60:21       1|1:37:15       0|1:100:44
+2      235319422       rs6711123       G       A       .       PASS    AA=g;DP=78      GT:GQ:DP        0|0:60:21       1|1:43:16       0|1:100:29
+21     20836697        rs10222122      G       C       .       PASS    AA=C;DP=86      GT:GQ:DP        0|0:60:21       1|1:49:19       0|1:100:45
+9      72289274        rs7849735       T       C       .       PASS    AA=T;DP=106     GT:GQ:DP        0|0:60:21       1|1:49:20       0|1:100:65
+7      132300730       rs17166821      C       G       .       PASS    AA=G;DP=114     GT:GQ:DP        0|0:60:21       1|1:49:20       0|1:100:73
+8      139489798       rs1589223       G       A       .       PASS    AA=A;DP=113     GT:GQ:DP        0|0:60:21       1|1:49:21       0|1:100:72
+12     76778039        rs11613476      C       T       .       PASS    AA=C;DP=74      GT:GQ:DP        0|0:60:21       1|1:52:19       0|1:100:23
+1      208614889       rs7355031       G       C       .       PASS    AA=C;DP=97      GT:GQ:DP        0|0:60:21       1|1:52:20       0|1:100:45
+11     21613674        rs4335542       G       C       .       PASS    AA=C;DP=103     GT:GQ:DP        0|0:60:21       1|1:52:21       0|1:100:60
+1      20824037        rs10799650      T       A       .       PASS    AA=T;DP=103     GT:GQ:DP        0|0:60:21       1|1:55:20       0|1:100:64
+8      51286671        rs16914489      G       A       .       PASS    AA=G;DP=104     GT:GQ:DP        0|0:60:21       1|1:64:23       0|1:100:60
+18     59407092        rs59160527      A       T       .       PASS    AA=A;DP=81      GT:GQ:DP        0|0:60:21       1|1:6:4 0|1:100:43
+X      150222014       rs4828561       A       G       .       PASS    AA=G;DP=119     GT:GQ:DP        0|0:60:21       1|1:82:30       0|1:100:35
+18     25282536        .       G       A       .       PASS    AA=G;DP=78      GT:GQ:DP        0|0:60:22       1|1:28:11       0|1:100:46
+18     23918552        rs8087643       T       C       .       PASS    AA=t;DP=107     GT:GQ:DP        0|0:60:22       1|1:29:23       0|1:100:60
+15     60638514        rs11630706      T       A       .       PASS    AA=T;DP=92      GT:GQ:DP        0|0:60:22       1|1:31:12       0|1:100:39
+14     48670056        .       G       A       .       PASS    AA=g;DP=108     GT:GQ:DP        0|0:60:22       1|1:43:18       0|1:100:67
+3      135963104       rs4955490       G       A       .       PASS    AA=G;DP=106     GT:GQ:DP        0|0:60:22       1|1:61:22       0|1:100:64
+9      32094808        rs7040750       A       G       .       PASS    AA=A;DP=110     GT:GQ:DP        0|0:60:24       0|1:100:19      0|0:100:55
+5      46323938        rs8185338       G       C       .       PASS    AA=.;DP=113     GT:GQ:DP        0|0:60:24       0|1:100:28      0|0:100:59
+5      35284200        .       G       A       .       PASS    AA=g;DP=103     GT:GQ:DP        0|0:60:25       0|1:100:17      0|0:100:64
+14     54909845        rs10131730      C       T       .       PASS    AA=T;DP=111     GT:GQ:DP        0|0:60:25       1|0:100:25      0|1:100:61
+4      68420666        rs6841984       T       C       .       PASS    AA=T;DP=90      GT:GQ:DP        0|0:60:26       0|1:100:16      0|0:100:46
+8      16891136        rs2640899       A       C       .       PASS    AA=A;DP=115     GT:GQ:DP        0|0:60:26       1|0:100:29      0|1:100:59
+2      202267729       .       T       C       .       PASS    AA=T;DP=112     GT:GQ:DP        0|0:60:26       1|0:89:19       0|1:100:68
+1      22492534        .       G       A       .       PASS    AA=g;DP=81      GT:GQ:DP        0|0:60:27       1|0:60:12       0|1:100:39
+1      15593892        rs58856011      G       T       .       PASS    AA=G;DP=82      GT:GQ:DP        0|0:60:27       1|0:7:9 0|1:100:39
+17     38781419        rs9646412       A       T       .       PASS    AA=A;DP=105     GT:GQ:DP        0|0:60:29       1|0:100:18      0|1:100:59
+11     34056206        rs56973150      A       G       .       PASS    AA=A;DP=105     GT:GQ:DP        0|0:60:29       1|0:100:22      0|1:100:58
+10     66513611        rs10761912      G       T       .       PASS    AA=g;DP=116     GT:GQ:DP        0|0:60:30       0|1:100:11      0|0:100:77
+19     49183047        rs431166        G       A       .       PASS    AA=A;DP=130     GT:GQ:DP        0|0:60:30       0|1:100:13      0|0:100:49
+1      117325021       rs12067142      G       A       .       PASS    AA=G;DP=120;HM2 GT:GQ:DP        0|0:60:30       0|1:100:18      0|0:100:76
+12     71518903        rs11179399      T       G       .       PASS    AA=G;DP=121     GT:GQ:DP        0|0:60:30       0|1:100:19      0|0:100:71
+1      42918044        rs12145783      A       G       .       PASS    AA=A;DP=119;HM2;HM3     GT:GQ:DP        0|0:60:30       0|1:100:20      0|0:100:69
+16     12444627        rs12924020      G       C       .       PASS    AA=G;DP=117     GT:GQ:DP        0|0:60:30       0|1:100:21      0|0:100:67
+2      139541363       rs16841578      G       T       .       PASS    AA=G;DP=117     GT:GQ:DP        0|0:60:30       0|1:100:24      0|0:100:64
+8      21163104        .       G       A       .       PASS    AA=G;DP=126     GT:GQ:DP        0|0:60:30       0|1:100:24      0|0:100:75
+6      92013484        rs9362858       T       A       .       PASS    AA=T;DP=133     GT:GQ:DP        0|0:60:30       0|1:100:26      0|0:100:74
+7      31191015        .       C       T       .       PASS    AA=C;DP=109     GT:GQ:DP        0|0:60:30       0|1:100:28      0|0:100:53
+12     26565888        .       T       G       .       PASS    AA=T;DP=150     GT:GQ:DP        0|0:60:30       0|1:100:30      0|0:100:45
+8      57020754        .       C       T       .       PASS    AA=C;DP=122     GT:GQ:DP        0|0:60:30       0|1:100:30      0|0:100:62
+20     31445093        rs184110        G       A       .       PASS    AA=G;DP=140     GT:GQ:DP        0|0:60:30       0|1:100:30      0|0:100:81
+3      141169674       rs987198        A       C       .       PASS    AA=A;DP=136     GT:GQ:DP        0|0:60:30       0|1:100:35      0|0:100:69
+4      6746400 .       A       G       .       PASS    AA=A;DP=125     GT:GQ:DP        0|0:60:30       1|1:43:18       0|1:100:77
+3      28738775        rs13089173      T       C       .       PASS    AA=T;DP=134     GT:GQ:DP        0|0:60:30       1|1:73:26       0|1:100:77
+22     32504342        rs11913622      C       A       .       PASS    AA=A;DP=148     GT:GQ:DP        0|0:60:31       0|1:100:22      0|0:100:47
+2      26735492        .       C       A       .       PASS    AA=C;DP=127     GT:GQ:DP        0|0:60:31       1|0:100:18      0|1:100:66
+20     4351167 rs6052555       C       T       .       PASS    AA=T;DP=102     GT:GQ:DP        0|0:60:31       1|0:100:19      0|1:100:54
+18     30413648        rs2165074       G       A       .       PASS    AA=G;DP=120     GT:GQ:DP        0|0:60:31       1|0:100:20      0|1:100:72
+2      134397761       rs16829760      G       T       .       PASS    AA=G;DP=124     GT:GQ:DP        0|0:60:31       1|0:100:20      0|1:100:76
+17     29653653        rs16969438      T       C       .       PASS    AA=T;DP=127     GT:GQ:DP        0|0:60:31       1|0:100:20      0|1:100:79
+8      10812024        .       G       T       .       PASS    AA=G;DP=123     GT:GQ:DP        0|0:60:31       1|0:100:22      0|1:100:68
+2      168388046       rs6718868       A       C       .       PASS    AA=A;DP=124     GT:GQ:DP        0|0:60:31       1|0:100:24      0|1:100:72
+20     35838121        rs238300        G       A       .       PASS    AA=G;DP=144     GT:GQ:DP        0|0:60:31       1|0:100:25      0|1:100:47
+17     12481456        rs11078087      C       A       .       PASS    AA=c;DP=127     GT:GQ:DP        0|0:60:31       1|0:100:26      0|1:100:73
+12     50965167        rs10876272      A       G       .       PASS    AA=A;DP=131     GT:GQ:DP        0|0:60:31       1|0:100:26      0|1:100:76
+21     41188643        rs9982070       C       G       .       PASS    AA=C;DP=129     GT:GQ:DP        0|0:60:31       1|0:100:27      0|1:100:73
+5      41800983        rs56662446      G       A       .       PASS    AA=G;DP=141     GT:GQ:DP        0|0:60:31       1|0:100:28      0|1:100:84
+17     16417852        rs60669238      A       G       .       PASS    AA=A;DP=140     GT:GQ:DP        0|0:60:31       1|0:100:33      0|1:100:79
+7      150708206       rs59268089      C       T       .       PASS    AA=C;DP=95      GT:GQ:DP        0|0:60:31       1|0:60:9        0|1:100:56
+10     63572697        rs7906289       G       T       .       PASS    AA=T;DP=102     GT:GQ:DP        0|0:60:31       1|0:66:18       0|1:100:54
+22     37662569        rs1014971       C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        0|0:60:31       1|0:70:15       0|1:100:61
+7      98808180        .       C       T       .       PASS    AA=C;DP=96      GT:GQ:DP        0|0:60:31       1|0:80:11       0|1:100:53
+8      79718029        rs1466526       C       G       .       PASS    AA=a;DP=125     GT:GQ:DP        0|0:60:31       1|0:84:30       0|1:100:63
+1      48624944        .       C       T       .       PASS    AA=C;DP=126     GT:GQ:DP        0|0:60:31       1|0:85:15       0|1:100:78
+7      91742795        .       C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        0|0:60:32       1|0:100:21      0|1:100:69
+6      15690386        rs2743550       C       A       .       PASS    AA=A;DP=129     GT:GQ:DP        0|0:60:32       1|0:100:25      0|1:100:77
+15     61440979        rs61322604      T       G       .       PASS    AA=T;DP=119     GT:GQ:DP        0|0:60:40       1|0:88:17       0|1:100:59
+6      113081628       rs9374353       G       A       .       PASS    AA=G;DP=89      GT:GQ:DP        0|0:61:22       1|0:8:15        0|1:100:50
+6      63860237        .       C       A       .       PASS    AA=c;DP=85      GT:GQ:DP        0|0:61:23       1|0:100:16      0|1:100:48
+4      14523355        .       G       A       .       PASS    AA=G;DP=109     GT:GQ:DP        0|0:61:25       0|1:100:18      0|0:100:67
+5      138264219       rs10479194      A       G       .       PASS    AA=A;DP=128     GT:GQ:DP        0|0:61:25       0|1:100:21      0|0:100:81
+15     31084878        .       A       G       .       PASS    AA=A;DP=91      GT:GQ:DP        0|0:61:25       0|1:100:22      0|0:100:42
+8      9987124 .       A       G       .       PASS    AA=A;DP=122     GT:GQ:DP        0|0:61:25       0|1:100:24      0|0:100:75
+11     64928773        rs694243        C       T       .       PASS    AA=C;DP=141     GT:GQ:DP        0|0:61:25       1|0:100:30      0|1:100:84
+4      1015868 rs11728938      T       C       .       PASS    AA=C;DP=82      GT:GQ:DP        0|0:61:25       1|0:39:8        0|1:100:45
+22     47383198        rs28677957      C       T       .       PASS    AA=C;DP=94      GT:GQ:DP        0|0:61:25       1|0:46:8        0|1:100:61
+2      166682394       .       A       G       .       PASS    AA=A;DP=96      GT:GQ:DP        0|0:61:26       0|1:100:14      0|0:100:57
+3      82666688        .       A       G       .       PASS    AA=A;DP=114     GT:GQ:DP        0|0:61:27       1|0:100:17      0|1:100:73
+2      219160741       rs58945674      T       C       .       PASS    AA=T;DP=111     GT:GQ:DP        0|0:61:27       1|0:100:18      0|1:100:67
+6      16678752        rs236958        A       G       .       PASS    AA=A;DP=140     GT:GQ:DP        0|0:61:27       1|0:100:24      0|1:100:67
+18     53200611        rs221856        T       G       .       PASS    AA=a;DP=125     GT:GQ:DP        0|0:61:27       1|1:64:23       0|1:100:76
+2      240270700       rs1465820       A       G       .       PASS    AA=G;DP=119     GT:GQ:DP        0|0:61:28       0|1:100:21      0|0:100:75
+8      84900597        rs57601001      G       A       .       PASS    AA=G;DP=70      GT:GQ:DP        0|0:61:28       1|0:71:12       0|1:100:20
+1      87115398        rs581405        G       T       .       PASS    AA=G;DP=109;HM2;HM3     GT:GQ:DP        0|0:61:29       0|1:100:28      0|0:100:52
+18     55552258        rs1893670       G       T       .       PASS    AA=G;DP=132     GT:GQ:DP        0|0:61:29       1|0:100:21      0|1:100:84
+6      151754926       rs59499115      A       G       .       PASS    AA=A;DP=111     GT:GQ:DP        0|0:61:29       1|0:100:22      0|1:100:60
+22     41621473        rs5759015       C       A       .       PASS    AA=c;DP=170     GT:GQ:DP        0|0:61:30       1|0:100:27      0|1:100:62
+2      213505278       rs62186511      C       A       .       PASS    AA=C;DP=87      GT:GQ:DP        0|0:61:30       1|0:89:21       0|1:100:29
+4      4709144 .       A       G       .       PASS    AA=A;DP=140     GT:GQ:DP        0|0:61:31       1|0:92:17       0|1:100:54
+22     43153146        rs7287729       G       A       .       PASS    AA=G;DP=114     GT:GQ:DP        0|0:61:32       1|1:31:14       0|1:100:72
+3      11108306        rs7626835       T       A       .       PASS    AA=T;DP=103     GT:GQ:DP        0|0:61:32       1|1:43:16       0|1:100:55
+6      17151880        rs7758032       A       T       .       PASS    AA=A;DP=132     GT:GQ:DP        0|0:61:32       1|1:73:27       0|1:100:69
+22     22565380        rs4822447       A       G       .       PASS    AA=N;DP=111     GT:GQ:DP        0|0:61:33       0|1:100:21      0|0:100:59
+6      71833750        rs9455316       C       T       .       PASS    AA=C;DP=85      GT:GQ:DP        0|0:62:19       0|1:100:10      0|0:100:56
+12     87021967        .       A       C       .       PASS    AA=A;DP=87      GT:GQ:DP        0|0:62:19       0|1:100:10      0|0:100:59
+1      86694247        rs55719851      T       C       .       PASS    AA=T;DP=82      GT:GQ:DP        0|0:62:19       0|1:100:11      0|0:100:47
+5      44554119        rs56203280      A       G       .       PASS    AA=G;DP=81      GT:GQ:DP        0|0:62:19       0|1:100:11      0|0:100:50
+6      93885563        rs12528846      A       G       .       PASS    AA=A;DP=83      GT:GQ:DP        0|0:62:19       0|1:100:12      0|0:100:53
+11     113087088       rs56000371      G       A       .       PASS    AA=A;DP=90      GT:GQ:DP        0|0:62:19       0|1:100:12      0|0:100:59
+4      178832805       rs10031113      C       A       .       PASS    AA=C;DP=95      GT:GQ:DP        0|0:62:19       0|1:100:12      0|0:100:67
+3      38893492        .       T       G       .       PASS    AA=T;DP=76      GT:GQ:DP        0|0:62:19       0|1:100:13      0|0:100:45
+8      63862584        .       C       A       .       PASS    AA=C;DP=78      GT:GQ:DP        0|0:62:19       0|1:100:13      0|0:100:47
+6      105184811       rs2185061       A       C       .       PASS    AA=A;DP=93      GT:GQ:DP        0|0:62:19       0|1:100:13      0|0:100:62
+21     20637362        rs2826192       C       T       .       PASS    AA=C;DP=75      GT:GQ:DP        0|0:62:19       0|1:100:13      0|0:99:33
+13     107843987       rs2181769       A       G       .       PASS    AA=A;DP=73      GT:GQ:DP        0|0:62:19       0|1:100:14      0|0:100:38
+10     19123836        rs2493611       T       C       .       PASS    AA=C;DP=79      GT:GQ:DP        0|0:62:19       0|1:100:14      0|0:100:47
+5      51037959        rs6884075       G       T       .       PASS    AA=G;DP=89      GT:GQ:DP        0|0:62:19       0|1:100:14      0|0:100:55
+22     47541769        .       G       A       .       PASS    AA=G;DP=89      GT:GQ:DP        0|0:62:19       0|1:100:14      0|0:100:56
+21     46119402        .       C       G       .       PASS    AA=C;DP=88      GT:GQ:DP        0|0:62:19       0|1:100:15      0|0:100:42
+13     63605062        rs1911967       G       A       .       PASS    AA=G;DP=91      GT:GQ:DP        0|0:62:19       0|1:100:15      0|0:100:57
+3      106536913       rs10084657      G       A       .       PASS    AA=G;DP=105     GT:GQ:DP        0|0:62:19       0|1:100:15      0|0:100:72
+8      137885502       .       T       C       .       PASS    AA=T;DP=73      GT:GQ:DP        0|0:62:19       0|1:100:15      0|0:93:31
+6      66103281        rs6939438       T       G       .       PASS    AA=T;DP=67      GT:GQ:DP        0|0:62:19       0|1:100:15      0|0:99:33
+16     7891063 .       G       A       .       PASS    AA=G;DP=78      GT:GQ:DP        0|0:62:19       0|1:100:16      0|0:100:42
+3      64163164        rs829525        T       C       .       PASS    AA=T;DP=83      GT:GQ:DP        0|0:62:19       0|1:100:16      0|0:100:47
+12     30245033        rs7310185       C       A       .       PASS    AA=C;DP=95      GT:GQ:DP        0|0:62:19       0|1:100:16      0|0:100:54
+11     96144851        rs10790056      C       T       .       PASS    AA=T;DP=92      GT:GQ:DP        0|0:62:19       0|1:100:16      0|0:100:58
+10     106945071       rs1484237       C       T       .       PASS    AA=C;DP=98      GT:GQ:DP        0|0:62:19       0|1:100:16      0|0:100:59
+18     21718878        rs55796054      T       A       .       PASS    AA=T;DP=120     GT:GQ:DP        0|0:62:19       0|1:100:16      0|0:100:84
+1      156810438       .       A       G       .       PASS    AA=A;DP=102     GT:GQ:DP        0|0:62:19       0|1:100:16      0|0:93:31
+1      56188827        .       C       T       .       PASS    AA=C;DP=93      GT:GQ:DP        0|0:62:19       0|1:100:17      0|0:100:57
+2      58759093        .       G       A       .       PASS    AA=G;DP=91      GT:GQ:DP        0|0:62:19       0|1:100:17      0|0:100:57
+4      22636755        rs4697363       A       G       .       PASS    AA=A;DP=106     GT:GQ:DP        0|0:62:19       0|1:100:17      0|0:87:29
+6      23415484        rs1925433       A       G       .       PASS    AA=A;DP=83      GT:GQ:DP        0|0:62:19       0|1:100:18      0|0:100:45
+3      42937922        rs62248965      C       T       .       PASS    AA=C;DP=87      GT:GQ:DP        0|0:62:19       0|1:100:18      0|0:100:51
+5      104838251       rs6888357       T       C       .       PASS    AA=C;DP=91      GT:GQ:DP        0|0:62:19       0|1:100:18      0|0:100:56
+3      88517411        .       T       C       .       PASS    AA=T;DP=94      GT:GQ:DP        0|0:62:19       0|1:100:18      0|0:100:58
+10     127837971       rs1380441       A       G       .       PASS    AA=T;DP=101     GT:GQ:DP        0|0:62:19       0|1:100:18      0|0:100:62
+5      165517837       .       C       T       .       PASS    AA=C;DP=123     GT:GQ:DP        0|0:62:19       0|1:100:19      0|0:100:36
+10     130770206       rs2123422       G       A       .       PASS    AA=A;DP=89      GT:GQ:DP        0|0:62:19       0|1:100:19      0|0:100:50
+7      53207039        rs17668717      T       C       .       PASS    AA=.;DP=86      GT:GQ:DP        0|0:62:19       0|1:100:19      0|0:100:51
+1      151303990       rs6680061       T       C       .       PASS    AA=C;DP=96      GT:GQ:DP        0|0:62:19       0|1:100:19      0|0:100:55
+4      30942097        .       A       C       .       PASS    AA=A;DP=101     GT:GQ:DP        0|0:62:19       0|1:100:19      0|0:100:61
+3      60473560        rs9828971       T       C       .       PASS    AA=T;DP=104     GT:GQ:DP        0|0:62:19       0|1:100:19      0|0:100:69
+4      31500422        .       T       G       .       PASS    AA=T;DP=114     GT:GQ:DP        0|0:62:19       0|1:100:19      0|0:87:29
+8      84667852        rs1489063       A       G       .       PASS    AA=G;DP=75      GT:GQ:DP        0|0:62:19       0|1:100:19      0|0:99:36
+1      220322872       rs7524127       C       T       .       PASS    AA=C;DP=93;HM2  GT:GQ:DP        0|0:62:19       0|1:100:20      0|0:100:39
+10     113433812       rs10885240      A       G       .       PASS    AA=A;DP=79      GT:GQ:DP        0|0:62:19       0|1:100:20      0|0:100:39
+2      225979063       rs11893709      C       A       .       PASS    AA=C;DP=79      GT:GQ:DP        0|0:62:19       0|1:100:20      0|0:100:41
+14     27785149        .       C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        0|0:62:19       0|1:100:20      0|0:100:69
+12     102501676       rs10861042      G       A       .       PASS    AA=G;DP=122     GT:GQ:DP        0|0:62:19       0|1:100:20      0|0:100:81
+5      44139161        rs10941654      C       T       .       PASS    AA=C;DP=125     GT:GQ:DP        0|0:62:19       0|1:100:21      0|0:100:40
+11     100393842       rs1379132       A       G       .       PASS    AA=A;DP=128     GT:GQ:DP        0|0:62:19       0|1:100:21      0|0:100:43
+11     82684274        rs7934720       G       T       .       PASS    AA=G;DP=91      GT:GQ:DP        0|0:62:19       0|1:100:21      0|0:100:52
+5      2491449 rs2897115       G       A       .       PASS    AA=A;DP=94      GT:GQ:DP        0|0:62:19       0|1:100:21      0|0:100:52
+8      77776102        rs4735739       G       A       .       PASS    AA=G;DP=97      GT:GQ:DP        0|0:62:19       0|1:100:21      0|0:100:57
+20     58463790        rs8119295       C       T       .       PASS    AA=C;DP=109     GT:GQ:DP        0|0:62:19       0|1:100:21      0|0:100:62
+4      98448376        .       T       A       .       PASS    AA=t;DP=112     GT:GQ:DP        0|0:62:19       0|1:100:21      0|0:100:70
+3      167322885       .       T       C       .       PASS    AA=T;DP=79      GT:GQ:DP        0|0:62:19       0|1:100:21      0|0:90:30
+X      9327960 rs5979088       T       C       .       PASS    AA=C;DP=97      GT:GQ:DP        0|0:62:19       0|1:100:22      0|0:100:34
+X      121945502       rs16997072      G       A       .       PASS    AA=G;DP=115     GT:GQ:DP        0|0:62:19       0|1:100:22      0|0:100:41
+7      143741528       rs4725650       C       T       .       PASS    AA=T;DP=89      GT:GQ:DP        0|0:62:19       0|1:100:22      0|0:100:46
+6      86912510        .       A       G       .       PASS    AA=A;DP=90      GT:GQ:DP        0|0:62:19       0|1:100:22      0|0:100:48
+9      9777273 .       T       C       .       PASS    AA=T;DP=89      GT:GQ:DP        0|0:62:19       0|1:100:22      0|0:100:49
+14     38885226        rs2274397       A       T       .       PASS    AA=A;DP=93      GT:GQ:DP        0|0:62:19       0|1:100:22      0|0:100:52
+10     16829137        .       G       A       .       PASS    AA=G;DP=105     GT:GQ:DP        0|0:62:19       0|1:100:22      0|0:100:63
+1      40392942        .       C       T       .       PASS    AA=C;DP=106     GT:GQ:DP        0|0:62:19       0|1:100:22      0|0:100:64
+12     40826905        .       A       G       .       PASS    AA=A;DP=105     GT:GQ:DP        0|0:62:19       0|1:100:22      0|0:100:65
+4      150454788       rs10017483      G       C       .       PASS    AA=G;DP=113     GT:GQ:DP        0|0:62:19       0|1:100:22      0|0:100:72
+5      99834043        .       C       T       .       PASS    AA=C;DP=92      GT:GQ:DP        0|0:62:19       0|1:100:23      0|0:100:50
+1      106989429       rs9325358       G       A       .       PASS    AA=g;DP=99;HM2  GT:GQ:DP        0|0:62:19       0|1:100:23      0|0:100:60
+6      103914301       rs12199811      C       T       .       PASS    AA=C;DP=106     GT:GQ:DP        0|0:62:19       0|1:100:23      0|0:100:63
+5      128279150       rs59361020      G       A       .       PASS    AA=G;DP=108     GT:GQ:DP        0|0:62:19       0|1:100:23      0|0:100:65
+6      25484031        .       A       G       .       PASS    AA=A;DP=109     GT:GQ:DP        0|0:62:19       0|1:100:23      0|0:100:68
+7      45911472        .       G       C       .       PASS    AA=G;DP=109     GT:GQ:DP        0|0:62:19       0|1:100:23      0|0:100:68
+2      76442404        rs11894155      A       G       .       PASS    AA=A;DP=115     GT:GQ:DP        0|0:62:19       0|1:100:23      0|0:100:73
+10     130661372       rs12258650      G       A       .       PASS    AA=G;DP=133     GT:GQ:DP        0|0:62:19       0|1:100:23      0|0:100:91
+11     59715324        .       C       T       .       PASS    AA=t;DP=106     GT:GQ:DP        0|0:62:19       0|1:100:24      0|0:100:62
+11     29318747        rs12808270      G       A       .       PASS    AA=G;DP=129     GT:GQ:DP        0|0:62:19       0|1:100:24      0|0:100:87
+7      133066844       rs55842945      A       G       .       PASS    AA=A;DP=95      GT:GQ:DP        0|0:62:19       0|1:100:25      0|0:100:50
+10     58728981        .       C       A       .       PASS    AA=c;DP=100     GT:GQ:DP        0|0:62:19       0|1:100:25      0|0:100:57
+18     22573582        rs508258        C       T       .       PASS    AA=c;DP=110     GT:GQ:DP        0|0:62:19       0|1:100:25      0|0:100:66
+9      10233927        rs12344061      A       G       .       PASS    AA=A;DP=111     GT:GQ:DP        0|0:62:19       0|1:100:25      0|0:100:68
+5      18644470        .       T       C       .       PASS    AA=T;DP=115     GT:GQ:DP        0|0:62:19       0|1:100:25      0|0:100:71
+10     19847407        rs11010227      T       A       .       PASS    AA=T;DP=84      GT:GQ:DP        0|0:62:19       0|1:100:26      0|0:100:40
+8      53907383        rs2360240       A       T       .       PASS    AA=A;DP=97      GT:GQ:DP        0|0:62:19       0|1:100:26      0|0:100:50
+4      110651385       .       A       C       .       PASS    AA=A;DP=98      GT:GQ:DP        0|0:62:19       0|1:100:26      0|0:100:54
+X      8931430 rs5979000       T       C       .       PASS    AA=C;DP=126     GT:GQ:DP        0|0:62:19       0|1:100:27      0|0:100:42
+1      167505532       .       A       G       .       PASS    AA=A;DP=118     GT:GQ:DP        0|0:62:19       0|1:100:27      0|0:100:59
+22     24712764        rs17635540      G       A       .       PASS    AA=G;DP=105     GT:GQ:DP        0|0:62:19       0|1:100:27      0|0:100:59
+4      136001859       .       T       G       .       PASS    AA=T;DP=114     GT:GQ:DP        0|0:62:19       0|1:100:27      0|0:100:70
+4      183084541       .       T       C       .       PASS    AA=T;DP=123     GT:GQ:DP        0|0:62:19       0|1:100:28      0|0:100:35
+1      81760775        rs12075029      G       A       .       PASS    AA=G;DP=126;HM2 GT:GQ:DP        0|0:62:19       0|1:100:28      0|0:100:80
+X      118853103       rs2239963       A       C       .       PASS    AA=a;DP=111     GT:GQ:DP        0|0:62:19       0|1:100:28      0|0:93:31
+X      27936745        .       T       G       .       PASS    AA=T;DP=119     GT:GQ:DP        0|0:62:19       0|1:100:28      0|0:96:32
+16     52974640        rs16953451      C       T       .       PASS    AA=C;DP=107     GT:GQ:DP        0|0:62:19       0|1:100:29      0|0:100:58
+17     49864653        rs9890636       A       G       .       PASS    AA=A;DP=117     GT:GQ:DP        0|0:62:19       0|1:100:29      0|0:100:70
+2      71837472        .       C       T       .       PASS    AA=C;DP=127     GT:GQ:DP        0|0:62:19       0|1:100:29      0|0:100:79
+5      28505339        rs10070482      C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        0|0:62:19       0|1:100:30      0|0:100:58
+X      7224039 rs12007605      G       A       .       PASS    AA=g;DP=162     GT:GQ:DP        0|0:62:19       0|1:100:31      0|0:100:60
+12     39927356        .       G       A       .       PASS    AA=G;DP=113     GT:GQ:DP        0|0:62:19       0|1:100:32      0|0:100:59
+3      95687896        rs11711691      T       C       .       PASS    AA=C;DP=107     GT:GQ:DP        0|0:62:19       0|1:100:32      0|0:100:61
+8      130459170       rs3997658       G       A       .       PASS    AA=G;DP=152     GT:GQ:DP        0|0:62:19       0|1:100:35      0|0:100:54
+17     76205706        rs7503807       A       C       .       PASS    AA=A;DP=141     GT:GQ:DP        0|0:62:19       0|1:100:36      0|0:100:44
+5      178112905       rs4280887       C       T       .       PASS    AA=C;DP=104     GT:GQ:DP        0|0:62:19       0|1:85:17       0|0:77:26
+8      130604238       .       T       C       .       PASS    AA=T;DP=107     GT:GQ:DP        0|0:62:20       0|1:100:15      0|0:100:73
+9      112229495       .       T       G       .       PASS    AA=T;DP=90      GT:GQ:DP        0|0:62:20       0|1:100:16      0|0:100:54
+7      68037583        rs28433166      G       A       .       PASS    AA=G;DP=105     GT:GQ:DP        0|0:62:20       0|1:100:16      0|0:100:70
+9      85152652        rs10867995      C       G       .       PASS    AA=G;DP=111     GT:GQ:DP        0|0:62:20       0|1:100:17      0|0:100:72
+13     71393699        rs12427637      T       G       .       PASS    AA=T;DP=88      GT:GQ:DP        0|0:62:20       0|1:100:19      0|0:100:50
+18     46104111        rs7245295       A       C       .       PASS    AA=A;DP=95      GT:GQ:DP        0|0:62:20       0|1:100:19      0|0:100:59
+6      75618759        rs57728927      C       A       .       PASS    AA=C;DP=100     GT:GQ:DP        0|0:62:20       0|1:100:19      0|0:100:61
+3      35831734        rs7635314       G       A       .       PASS    AA=A;DP=107     GT:GQ:DP        0|0:62:20       0|1:100:19      0|0:100:68
+12     125696568       .       T       C       .       PASS    AA=T;DP=117     GT:GQ:DP        0|0:62:20       0|1:100:20      0|0:100:77
+5      113383322       .       C       T       .       PASS    AA=c;DP=109     GT:GQ:DP        0|0:62:20       0|1:100:20      0|0:75:25
+10     84508296        .       C       T       .       PASS    AA=T;DP=115     GT:GQ:DP        0|0:62:20       0|1:100:21      0|0:84:28
+4      59111091        rs56185327      C       T       .       PASS    AA=C;DP=103     GT:GQ:DP        0|0:62:20       0|1:100:22      0|0:100:61
+12     82692702        rs11833474      C       T       .       PASS    AA=C;DP=124     GT:GQ:DP        0|0:62:20       0|1:100:23      0|0:90:30
+11     124197395       rs580772        T       G       .       PASS    AA=T;DP=117     GT:GQ:DP        0|0:62:20       0|1:100:24      0|0:100:74
+X      119692683       rs5957437       C       T       .       PASS    AA=C;DP=137     GT:GQ:DP        0|0:62:20       0|1:100:25      0|0:100:41
+13     38212814        rs895899        G       A       .       PASS    AA=G;DP=103     GT:GQ:DP        0|0:62:20       0|1:100:25      0|0:100:58
+3      70330813        .       C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        0|0:62:20       0|1:100:25      0|0:100:70
+5      21851481        rs13190397      G       A       .       PASS    AA=A;DP=118     GT:GQ:DP        0|0:62:20       0|1:100:25      0|0:100:73
+8      119650154       rs17756861      T       C       .       PASS    AA=T;DP=124     GT:GQ:DP        0|0:62:20       0|1:100:26      0|0:100:39
+6      64695432        .       C       T       .       PASS    AA=C;DP=127     GT:GQ:DP        0|0:62:20       0|1:100:26      0|0:100:82
+6      165328584       .       G       A       .       PASS    AA=G;DP=137     GT:GQ:DP        0|0:62:20       0|1:100:26      0|0:100:87
+10     125553470       rs60604705      G       C       .       PASS    AA=G;DP=122     GT:GQ:DP        0|0:62:20       0|1:100:27      0|0:100:76
+2      211953529       rs12475523      A       G       .       PASS    AA=G;DP=106     GT:GQ:DP        0|0:62:20       0|1:100:29      0|0:100:56
+11     56209102        .       G       T       .       PASS    AA=g;DP=125     GT:GQ:DP        0|0:62:20       0|1:100:34      0|0:100:74
+11     90545764        rs12274661      C       T       .       PASS    AA=C;DP=82      GT:GQ:DP        0|0:62:20       1|0:100:15      0|1:100:45
+13     53572391        rs2408990       T       C       .       PASS    AA=T;DP=84      GT:GQ:DP        0|0:62:20       1|0:100:15      0|1:100:47
+2      38431879        .       A       C       .       PASS    AA=A;DP=85      GT:GQ:DP        0|0:62:20       1|0:100:15      0|1:100:51
+10     95019673        rs11187359      C       A       .       PASS    AA=C;DP=99      GT:GQ:DP        0|0:62:20       1|0:100:15      0|1:100:65
+13     81888467        .       T       G       .       PASS    AA=T;DP=80      GT:GQ:DP        0|0:62:20       1|0:100:16      0|1:100:41
+7      31004840        .       C       A       .       PASS    AA=C;DP=97      GT:GQ:DP        0|0:62:20       1|0:100:16      0|1:100:61
+14     27013002        rs1959876       G       A       .       PASS    AA=G;DP=77      GT:GQ:DP        0|0:62:20       1|0:100:17      0|1:100:39
+5      26288965        rs7448735       T       G       .       PASS    AA=T;DP=79      GT:GQ:DP        0|0:62:20       1|0:100:17      0|1:100:43
+3      6695828 rs9823979       T       A       .       PASS    AA=A;DP=82      GT:GQ:DP        0|0:62:20       1|0:100:17      0|1:100:45
+11     48486424        .       G       T       .       PASS    AA=G;DP=88      GT:GQ:DP        0|0:62:20       1|0:100:17      0|1:100:51
+7      7157267 rs4724955       A       C       .       PASS    AA=A;DP=92      GT:GQ:DP        0|0:62:20       1|0:100:18      0|1:100:31
+12     81807680        .       T       C       .       PASS    AA=t;DP=82      GT:GQ:DP        0|0:62:20       1|0:100:18      0|1:100:32
+8      83725479        rs16910705      T       C       .       PASS    AA=t;DP=84      GT:GQ:DP        0|0:62:20       1|0:100:18      0|1:100:44
+3      648072  .       T       C       .       PASS    AA=T;DP=81      GT:GQ:DP        0|0:62:20       1|0:100:18      0|1:100:47
+10     16966374        rs780851        G       A       .       PASS    AA=G;DP=91      GT:GQ:DP        0|0:62:20       1|0:100:18      0|1:100:52
+10     52049109        rs57717008      T       G       .       PASS    AA=T;DP=100     GT:GQ:DP        0|0:62:20       1|0:100:18      0|1:100:61
+7      15014162        rs7784091       A       G       .       PASS    AA=A;DP=91      GT:GQ:DP        0|0:62:20       1|0:100:19      0|1:100:50
+6      114342159       rs1358945       G       T       .       PASS    AA=A;DP=95      GT:GQ:DP        0|0:62:20       1|0:100:19      0|1:100:56
+16     13678706        .       T       C       .       PASS    AA=T;DP=104     GT:GQ:DP        0|0:62:20       1|0:100:19      0|1:100:63
+6      119935609       .       G       T       .       PASS    AA=G;DP=113     GT:GQ:DP        0|0:62:20       1|0:100:19      0|1:100:75
+12     58772972        .       T       A       .       PASS    AA=T;DP=92      GT:GQ:DP        0|0:62:20       1|0:100:20      0|1:100:49
+11     99988587        .       C       A       .       PASS    AA=C;DP=95      GT:GQ:DP        0|0:62:20       1|0:100:20      0|1:100:52
+5      161040594       .       A       T       .       PASS    AA=A;DP=97      GT:GQ:DP        0|0:62:20       1|0:100:20      0|1:100:53
+1      84024022        rs2389652       G       T       .       PASS    AA=T;DP=97      GT:GQ:DP        0|0:62:20       1|0:100:20      0|1:100:56
+7      116849453       rs17139821      C       G       .       PASS    AA=C;DP=99      GT:GQ:DP        0|0:62:20       1|0:100:20      0|1:100:56
+8      77092571        .       G       C       .       PASS    AA=G;DP=99      GT:GQ:DP        0|0:62:20       1|0:100:20      0|1:100:56
+1      245142798       .       T       A       .       PASS    AA=T;DP=110     GT:GQ:DP        0|0:62:20       1|0:100:20      0|1:100:57
+1      156672003       rs7523172       C       T       .       PASS    AA=c;DP=106;HM2 GT:GQ:DP        0|0:62:20       1|0:100:20      0|1:100:61
+4      81188167        .       A       G       .       PASS    AA=A;DP=80      GT:GQ:DP        0|0:62:20       1|0:100:21      0|1:100:29
+13     107409191       .       T       C       .       PASS    AA=T;DP=102     GT:GQ:DP        0|0:62:20       1|0:100:21      0|1:100:62
+2      21761429        .       C       A       .       PASS    AA=C;DP=102     GT:GQ:DP        0|0:62:20       1|0:100:21      0|1:100:62
+10     43586424        .       C       T       .       PASS    AA=.;DP=103     GT:GQ:DP        0|0:62:20       1|0:100:21      0|1:100:63
+13     92212497        rs61345699      T       C       .       PASS    AA=T;DP=74      GT:GQ:DP        0|0:62:20       1|0:100:22      0|1:100:31
+3      152955077       rs28565534      G       C       .       PASS    AA=G;DP=94      GT:GQ:DP        0|0:62:20       1|0:100:22      0|1:100:51
+1      115949752       .       T       C       .       PASS    AA=T;DP=106     GT:GQ:DP        0|0:62:20       1|0:100:22      0|1:100:66
+8      5169522 rs61208185      T       C       .       PASS    AA=T;DP=109     GT:GQ:DP        0|0:62:20       1|0:100:22      0|1:100:68
+20     53703482        rs4811613       C       G       .       PASS    AA=C;DP=109     GT:GQ:DP        0|0:62:20       1|0:100:22      0|1:100:70
+5      113882197       rs58087457      G       A       .       PASS    AA=g;DP=113     GT:GQ:DP        0|0:62:20       1|0:100:22      0|1:100:74
+4      60017591        .       A       G       .       PASS    AA=A;DP=97      GT:GQ:DP        0|0:62:20       1|0:100:23      0|1:100:51
+12     104922310       rs11112832      A       G       .       PASS    AA=A;DP=94      GT:GQ:DP        0|0:62:20       1|0:100:23      0|1:100:52
+4      150337284       .       C       G       .       PASS    AA=C;DP=97      GT:GQ:DP        0|0:62:20       1|0:100:23      0|1:100:54
+4      86800029        rs4693122       A       G       .       PASS    AA=A;DP=101     GT:GQ:DP        0|0:62:20       1|0:100:23      0|1:100:58
+5      83359920        rs7712143       C       T       .       PASS    AA=C;DP=109     GT:GQ:DP        0|0:62:20       1|0:100:23      0|1:100:66
+3      2913734 rs17022006      G       A       .       PASS    AA=G;DP=119     GT:GQ:DP        0|0:62:20       1|0:100:23      0|1:100:75
+9      1353772 rs59740180      A       T       .       PASS    AA=A;DP=77      GT:GQ:DP        0|0:62:20       1|0:100:24      0|1:100:22
+X      44077826        rs60907033      T       C       .       PASS    AA=T;DP=108     GT:GQ:DP        0|0:62:20       1|0:100:24      0|1:100:41
+12     22099233        .       C       T       .       PASS    AA=C;DP=98      GT:GQ:DP        0|0:62:20       1|0:100:24      0|1:100:43
+8      32182340        .       G       A       .       PASS    AA=g;DP=104     GT:GQ:DP        0|0:62:20       1|0:100:24      0|1:100:60
+X      70143225        rs59089163      C       T       .       PASS    AA=C;DP=108     GT:GQ:DP        0|0:62:20       1|0:100:25      0|1:100:37
+18     23142839        .       G       A       .       PASS    AA=A;DP=103     GT:GQ:DP        0|0:62:20       1|0:100:25      0|1:100:56
+4      112176407       rs10024441      G       A       .       PASS    AA=G;DP=100     GT:GQ:DP        0|0:62:20       1|0:100:25      0|1:100:56
+2      170808958       rs61213083      C       A       .       PASS    AA=C;DP=105     GT:GQ:DP        0|0:62:20       1|0:100:25      0|1:100:60
+5      31141145        .       G       T       .       PASS    AA=G;DP=114     GT:GQ:DP        0|0:62:20       1|0:100:25      0|1:100:66
+7      137044963       rs4732264       A       G       .       PASS    AA=A;DP=110     GT:GQ:DP        0|0:62:20       1|0:100:25      0|1:100:66
+3      164296936       .       T       C       .       PASS    AA=C;DP=115     GT:GQ:DP        0|0:62:20       1|0:100:26      0|1:100:26
+15     81167976        .       C       G       .       PASS    AA=C;DP=122     GT:GQ:DP        0|0:62:20       1|0:100:26      0|1:100:75
+10     71005502        .       T       C       .       PASS    AA=T;DP=97      GT:GQ:DP        0|0:62:20       1|0:100:27      0|1:100:52
+15     95564900        .       C       T       .       PASS    AA=C;DP=103     GT:GQ:DP        0|0:62:20       1|0:100:27      0|1:100:57
+1      218477693       rs17007209      A       C       .       PASS    AA=A;DP=115;HM2 GT:GQ:DP        0|0:62:20       1|0:100:27      0|1:100:65
+16     77961161        .       T       C       .       PASS    AA=T;DP=126     GT:GQ:DP        0|0:62:20       1|0:100:27      0|1:100:77
+X      119811375       rs5911010       T       G       .       PASS    AA=G;DP=117     GT:GQ:DP        0|0:62:20       1|0:100:28      0|1:100:35
+1      116298813       rs699766        G       A       .       PASS    AA=G;DP=109;HM2;HM3     GT:GQ:DP        0|0:62:20       1|0:100:28      0|1:100:61
+7      94859739        rs740264        T       G       .       PASS    AA=T;DP=104     GT:GQ:DP        0|0:62:20       1|0:100:29      0|1:100:53
+10     122865030       rs17101456      A       G       .       PASS    AA=A;DP=101     GT:GQ:DP        0|0:62:20       1|0:100:29      0|1:100:54
+2      232853191       .       A       G       .       PASS    AA=A;DP=112     GT:GQ:DP        0|0:62:20       1|0:100:29      0|1:100:63
+18     22413327        rs9965877       T       A       .       PASS    AA=T;DP=119     GT:GQ:DP        0|0:62:20       1|0:100:29      0|1:100:70
+X      97762612        rs57105941      G       C       .       PASS    AA=G;DP=112     GT:GQ:DP        0|0:62:20       1|0:100:30      0|1:100:41
+1      66341686        rs1566527       T       A       .       PASS    AA=A;DP=133;HM2;HM3     GT:GQ:DP        0|0:62:20       1|0:100:30      0|1:100:65
+12     13658009        rs11608931      T       C       .       PASS    AA=T;DP=119     GT:GQ:DP        0|0:62:20       1|0:100:30      0|1:100:69
+11     37874808        .       T       C       .       PASS    AA=T;DP=133     GT:GQ:DP        0|0:62:20       1|0:100:30      0|1:100:75
+11     6039294 .       A       T       .       PASS    AA=T;DP=126     GT:GQ:DP        0|0:62:20       1|0:100:31      0|1:100:75
+1      83908824        .       T       C       .       PASS    AA=t;DP=89      GT:GQ:DP        0|0:62:20       1|0:100:32      0|1:100:28
+16     61868400        .       C       A       .       PASS    AA=C;DP=130     GT:GQ:DP        0|0:62:20       1|0:100:33      0|1:100:81
+18     25035469        rs1421236       G       A       .       PASS    AA=G;DP=113     GT:GQ:DP        0|0:62:20       1|0:100:35      0|1:100:60
+5      39623498        rs59404385      A       G       .       PASS    AA=G;DP=105     GT:GQ:DP        0|0:62:20       1|0:100:37      0|1:100:48
+8      76284418        .       G       A       .       PASS    AA=A;DP=80      GT:GQ:DP        0|0:62:20       1|0:27:19       0|1:100:42
+17     43481157        .       G       A       .       PASS    AA=G;DP=78      GT:GQ:DP        0|0:62:20       1|0:27:8        0|1:100:50
+4      176558429       .       A       C       .       PASS    AA=A;DP=76      GT:GQ:DP        0|0:62:20       1|0:32:18       0|1:100:39
+8      3810791 rs2627475       C       T       .       PASS    AA=C;DP=90      GT:GQ:DP        0|0:62:20       1|0:36:11       0|1:100:50
+16     75768521        rs62049562      T       C       .       PASS    AA=T;DP=77      GT:GQ:DP        0|0:62:20       1|0:36:17       0|1:100:42
+16     1436827 rs61365901      G       C       .       PASS    AA=G;DP=84      GT:GQ:DP        0|0:62:20       1|0:36:7        0|1:100:51
+5      97165871        .       G       A       .       PASS    AA=A;DP=78      GT:GQ:DP        0|0:62:20       1|0:39:9        0|1:100:47
+12     58694811        .       A       G       .       PASS    AA=A;DP=101     GT:GQ:DP        0|0:62:20       1|0:40:15       0|1:100:65
+4      112131606       rs2023837       G       A       .       PASS    AA=G;DP=74      GT:GQ:DP        0|0:62:20       1|0:48:8        0|1:100:33
+1      100982229       .       C       T       .       PASS    AA=C;DP=74      GT:GQ:DP        0|0:62:20       1|0:48:8        0|1:100:47
+12     3557758 rs6489481       T       C       .       PASS    AA=C;DP=81      GT:GQ:DP        0|0:62:20       1|0:52:15       0|1:100:32
+1      2012028 rs13303220      G       A       .       PASS    AA=G;DP=73      GT:GQ:DP        0|0:62:20       1|0:58:10       0|1:100:34
+22     34148398        rs133433        G       A       .       PASS    AA=G;DP=103     GT:GQ:DP        0|0:62:20       1|0:59:16       0|1:100:64
+10     51829011        .       C       T       .       PASS    AA=C;DP=95      GT:GQ:DP        0|0:62:20       1|0:65:18       0|1:100:59
+2      167735474       .       C       G       .       PASS    AA=T;DP=60      GT:GQ:DP        0|0:62:20       1|0:66:11       0|1:100:19
+16     2986347 rs62034562      T       G       .       PASS    AA=T;DP=91      GT:GQ:DP        0|0:62:20       1|0:66:6        0|1:100:67
+8      32606710        .       C       T       .       PASS    AA=C;DP=77      GT:GQ:DP        0|0:62:20       1|0:68:11       0|1:100:46
+10     53355795        .       T       C       .       PASS    AA=T;DP=88      GT:GQ:DP        0|0:62:20       1|0:70:19       0|1:100:47
+3      106114293       rs9830592       C       A       .       PASS    AA=C;DP=80      GT:GQ:DP        0|0:62:20       1|0:71:26       0|1:100:24
+6      136788986       rs17722974      G       A       .       PASS    AA=G;DP=118     GT:GQ:DP        0|0:62:20       1|0:73:20       0|1:100:78
+17     72353657        .       G       A       .       PASS    AA=G;DP=90      GT:GQ:DP        0|0:62:20       1|0:76:18       0|1:100:52
+4      42236521        .       A       G       .       PASS    AA=A;DP=87      GT:GQ:DP        0|0:62:20       1|0:78:20       0|1:100:49
+4      36786313        .       A       G       .       PASS    AA=A;DP=100     GT:GQ:DP        0|0:62:20       1|0:79:21       0|1:100:46
+9      135613449       .       G       A       .       PASS    AA=G;DP=125     GT:GQ:DP        0|0:62:20       1|0:80:21       0|1:100:82
+19     12762511        rs17878468      A       G       .       PASS    AA=A;DP=85      GT:GQ:DP        0|0:62:20       1|0:81:12       0|1:100:48
+13     84211775        rs1526010       A       G       .       PASS    AA=A;DP=87      GT:GQ:DP        0|0:62:20       1|0:81:13       0|1:100:53
+X      5634484 rs727222        C       G       .       PASS    AA=.;DP=85      GT:GQ:DP        0|0:62:20       1|0:82:17       0|1:100:34
+2      34580498        rs13431732      T       C       .       PASS    AA=T;DP=74      GT:GQ:DP        0|0:62:20       1|0:84:15       0|1:100:38
+7      18817386        rs2520351       T       C       .       PASS    AA=T;DP=90      GT:GQ:DP        0|0:62:20       1|0:85:19       0|1:100:51
+4      124265762       .       G       A       .       PASS    AA=G;DP=94      GT:GQ:DP        0|0:62:20       1|0:87:20       0|1:100:51
+3      190235208       .       T       C       .       PASS    AA=T;DP=81      GT:GQ:DP        0|0:62:20       1|0:88:17       0|1:100:44
+15     39219997        .       A       T       .       PASS    AA=a;DP=68      GT:GQ:DP        0|0:62:20       1|0:89:10       0|1:86:28
+7      89332037        .       G       A       .       PASS    AA=G;DP=80      GT:GQ:DP        0|0:62:20       1|0:89:14       0|1:100:42
+4      154463765       rs17029874      G       A       .       PASS    AA=G;DP=104     GT:GQ:DP        0|0:62:20       1|0:89:23       0|1:100:59
+17     61399809        rs7504021       T       C       .       PASS    AA=C;DP=94      GT:GQ:DP        0|0:62:20       1|0:90:13       0|1:100:59
+4      9369204 rs9998193       G       A       .       PASS    AA=g;DP=81      GT:GQ:DP        0|0:62:20       1|0:91:13       0|1:100:39
+8      18204552        .       A       G       .       PASS    AA=.;DP=72      GT:GQ:DP        0|0:62:20       1|0:91:14       0|1:100:28
+6      131148623       rs6927239       T       G       .       PASS    AA=T;DP=84      GT:GQ:DP        0|0:62:20       1|0:91:18       0|1:100:46
+13     93113863        .       T       A       .       PASS    AA=T;DP=85      GT:GQ:DP        0|0:62:20       1|0:92:16       0|1:100:46
+2      240160515       rs60260379      C       T       .       PASS    AA=C;DP=119     GT:GQ:DP        0|0:62:20       1|0:92:21       0|1:100:36
+8      115593959       rs17716101      A       G       .       PASS    AA=A;DP=99      GT:GQ:DP        0|0:62:20       1|0:93:16       0|1:100:64
+8      126688376       rs7845670       G       C       .       PASS    AA=C;DP=114     GT:GQ:DP        0|0:62:20       1|0:93:27       0|1:100:66
+4      109756396       .       A       G       .       PASS    AA=A;DP=76      GT:GQ:DP        0|0:62:20       1|0:94:12       0|1:100:45
+13     64906617        .       G       A       .       PASS    AA=g;DP=87      GT:GQ:DP        0|0:62:20       1|0:96:19       0|1:100:30
+12     127102207       rs58735103      C       T       .       PASS    AA=T;DP=120     GT:GQ:DP        0|0:62:20       1|0:96:23       0|1:100:23
+14     40906148        .       C       G       .       PASS    AA=C;DP=80      GT:GQ:DP        0|0:62:20       1|0:97:11       0|1:100:48
+6      108201771       rs6916494       G       A       .       PASS    AA=G;DP=97      GT:GQ:DP        0|0:62:20       1|0:97:16       0|1:100:63
+13     70832031        rs9572725       G       A       .       PASS    AA=g;DP=100     GT:GQ:DP        0|0:62:20       1|0:97:22       0|1:100:55
+14     42655358        .       A       T       .       PASS    AA=A;DP=105     GT:GQ:DP        0|0:62:20       1|0:97:22       0|1:100:64
+11     92495586        rs990660        T       C       .       PASS    AA=C;DP=108     GT:GQ:DP        0|0:62:20       1|0:97:23       0|1:100:66
+11     92126839        rs7127057       G       A       .       PASS    AA=G;DP=76      GT:GQ:DP        0|0:62:20       1|0:98:18       0|1:20:28
+20     23977603        .       G       C       .       PASS    AA=G;DP=124     GT:GQ:DP        0|0:62:20       1|0:99:28       0|1:100:78
+1      24382579        .       G       A       .       PASS    AA=g;DP=108     GT:GQ:DP        0|0:62:21       0|1:100:14      0|0:100:71
+4      23464913        .       C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        0|0:62:21       0|1:100:23      0|0:100:76
+4      84992102        .       C       A       .       PASS    AA=C;DP=112     GT:GQ:DP        0|0:62:21       0|1:100:28      0|0:100:63
+13     77065262        rs9318489       T       C       .       PASS    AA=T;DP=135     GT:GQ:DP        0|0:62:21       0|1:100:36      0|0:100:78
+8      31513466        rs13439434      C       T       .       PASS    AA=C;DP=86      GT:GQ:DP        0|0:62:21       1|0:100:15      0|1:100:53
+8      109378032       rs55725263      G       A       .       PASS    AA=G;DP=75      GT:GQ:DP        0|0:62:21       1|0:100:16      0|1:100:28
+10     54431430        .       C       T       .       PASS    AA=C;DP=100     GT:GQ:DP        0|0:62:21       1|0:100:16      0|1:100:64
+10     65802452        rs2456686       G       A       .       PASS    AA=g;DP=84      GT:GQ:DP        0|0:62:21       1|0:100:17      0|1:100:45
+3      30454603        rs11915965      T       G       .       PASS    AA=T;DP=88      GT:GQ:DP        0|0:62:21       1|0:100:17      0|1:100:48
+4      184708382       .       C       T       .       PASS    AA=C;DP=96      GT:GQ:DP        0|0:62:21       1|0:100:17      0|1:100:57
+12     66277054        rs2620770       C       T       .       PASS    AA=T;DP=96      GT:GQ:DP        0|0:62:21       1|0:100:17      0|1:100:60
+15     98541321        rs8029288       C       T       .       PASS    AA=T;DP=98      GT:GQ:DP        0|0:62:21       1|0:100:18      0|1:100:59
+3      76757580        rs9637486       T       G       .       PASS    AA=T;DP=103     GT:GQ:DP        0|0:62:21       1|0:100:19      0|1:100:63
+12     58068495        rs10783962      A       G       .       PASS    AA=A;DP=104     GT:GQ:DP        0|0:62:21       1|0:100:19      0|1:100:65
+8      18587411        rs1487766       C       T       .       PASS    AA=T;DP=107     GT:GQ:DP        0|0:62:21       1|0:100:21      0|1:100:64
+19     32702730        rs8103830       G       A       .       PASS    AA=.;DP=87      GT:GQ:DP        0|0:62:21       1|0:100:22      0|1:100:42
+1      144113371       rs2027387       C       G       .       PASS    AA=.;DP=118;HM2 GT:GQ:DP        0|0:62:21       1|0:100:22      0|1:100:76
+4      36160320        .       A       G       .       PASS    AA=A;DP=96      GT:GQ:DP        0|0:62:21       1|0:100:23      0|1:100:51
+8      26854633        rs9693590       C       A       .       PASS    AA=C;DP=98      GT:GQ:DP        0|0:62:21       1|0:100:25      0|1:100:50
+18     62009640        rs17076007      G       C       .       PASS    AA=G;DP=104     GT:GQ:DP        0|0:62:21       1|0:100:27      0|1:100:53
+3      148362785       rs951463        A       G       .       PASS    AA=A;DP=105     GT:GQ:DP        0|0:62:21       1|0:100:29      0|1:100:56
+7      135524221       rs4732179       C       T       .       PASS    AA=C;DP=122     GT:GQ:DP        0|0:62:21       1|0:100:30      0|1:100:71
+20     53049639        rs6023773       T       C       .       PASS    AA=C;DP=108     GT:GQ:DP        0|0:62:21       1|0:100:31      0|1:100:57
+4      25838244        .       T       G       .       PASS    AA=T;DP=108     GT:GQ:DP        0|0:62:21       1|0:100:34      0|1:100:54
+1      156160063       .       T       C       .       PASS    AA=T;DP=143     GT:GQ:DP        0|0:62:21       1|0:100:35      0|1:100:67
+8      111657177       .       C       A       .       PASS    AA=C;DP=116     GT:GQ:DP        0|0:62:21       1|0:100:39      0|1:100:57
+10     38055416        .       G       A       .       PASS    AA=g;DP=94      GT:GQ:DP        0|0:62:21       1|0:34:16       0|1:100:46
+20     61485488        rs6090397       C       T       .       PASS    AA=C;DP=82      GT:GQ:DP        0|0:62:21       1|0:43:12       0|1:100:44
+2      167717022       .       A       G       .       PASS    AA=G;DP=104     GT:GQ:DP        0|0:62:21       1|0:56:23       0|1:100:57
+8      16557977        .       C       T       .       PASS    AA=c;DP=89      GT:GQ:DP        0|0:62:21       1|0:59:19       0|1:100:48
+9      2697333 rs2168133       A       C       .       PASS    AA=A;DP=112     GT:GQ:DP        0|0:62:21       1|0:62:21       0|1:100:71
+2      242359347       .       C       T       .       PASS    AA=C;DP=101     GT:GQ:DP        0|0:62:21       1|0:63:21       0|1:100:60
+15     48746290        rs7167138       C       G       .       PASS    AA=C;DP=98      GT:GQ:DP        0|0:62:21       1|0:73:17       0|1:100:59
+13     39794956        rs12583198      T       G       .       PASS    AA=T;DP=102     GT:GQ:DP        0|0:62:21       1|0:77:16       0|1:100:25
+22     47909900        rs57495922      C       G       .       PASS    AA=C;DP=92      GT:GQ:DP        0|0:62:21       1|0:80:22       0|1:100:48
+3      142903252       rs9882031       T       C       .       PASS    AA=t;DP=86      GT:GQ:DP        0|0:62:21       1|0:81:8        0|1:100:58
+4      168412312       .       T       C       .       PASS    AA=T;DP=112     GT:GQ:DP        0|0:62:21       1|0:82:23       0|1:100:70
+7      80067292        .       T       C       .       PASS    AA=T;DP=81      GT:GQ:DP        0|0:62:21       1|0:85:16       0|1:100:32
+6      168615526       rs9456121       T       C       .       PASS    AA=T;DP=122     GT:GQ:DP        0|0:62:21       1|0:92:17       0|1:100:39
+18     64390807        rs9962116       C       T       .       PASS    AA=C;DP=89      GT:GQ:DP        0|0:62:21       1|0:93:14       0|1:100:55
+4      8325400 rs13150043      C       T       .       PASS    AA=c;DP=96      GT:GQ:DP        0|0:62:21       1|0:95:15       0|1:100:59
+7      98270873        .       A       G       .       PASS    AA=A;DP=110     GT:GQ:DP        0|0:62:21       1|0:95:17       0|1:100:71
+11     76579659        .       C       T       .       PASS    AA=C;DP=105     GT:GQ:DP        0|0:62:21       1|0:95:25       0|1:100:60
+20     30107256        rs6121328       C       T       .       PASS    AA=C;DP=99      GT:GQ:DP        0|0:62:21       1|0:99:20       0|1:100:55
+6      11009035        rs16870756      G       A       .       PASS    AA=G;DP=106     GT:GQ:DP        0|0:62:22       0|1:100:14      0|0:100:72
+1      102532276       rs12046423      A       T       .       PASS    AA=A;DP=118;HM2;HM3     GT:GQ:DP        0|0:62:22       0|1:100:29      0|0:100:63
+2      134774962       .       C       T       .       PASS    AA=T;DP=102     GT:GQ:DP        0|0:62:22       1|0:100:17      0|1:100:65
+11     29402803        .       G       T       .       PASS    AA=G;DP=110     GT:GQ:DP        0|0:62:22       1|0:100:22      0|1:100:61
+10     95595020        rs4919581       T       C       .       PASS    AA=C;DP=69      GT:GQ:DP        0|0:62:22       1|0:46:6        0|1:100:33
+1      161818462       rs58920332      T       C       .       PASS    AA=T;DP=99      GT:GQ:DP        0|0:62:22       1|0:48:20       0|1:100:61
+X      112805652       rs5929180       A       G       .       PASS    AA=A;DP=105     GT:GQ:DP        0|0:62:22       1|0:64:25       0|1:100:40
+15     75099060        rs34192860      A       G       .       PASS    AA=G;DP=120     GT:GQ:DP        0|0:62:22       1|0:70:17       0|1:100:83
+12     16985889        .       G       A       .       PASS    AA=G;DP=77      GT:GQ:DP        0|0:62:22       1|0:94:13       0|1:100:43
+12     130494120       rs4907463       T       C       .       PASS    AA=T;DP=114     GT:GQ:DP        0|0:62:23       1|0:100:20      0|1:100:67
+9      13950309        rs12335962      G       T       .       PASS    AA=T;DP=133     GT:GQ:DP        0|0:62:25       0|1:100:29      0|0:100:84
+21     22569569        rs2827328       A       T       .       PASS    AA=T;DP=133     GT:GQ:DP        0|0:62:25       0|1:100:30      0|0:100:79
+12     6519801 rs2240875       A       G       .       PASS    AA=G;DP=68      GT:GQ:DP        0|0:62:25       1|0:8:5 0|1:100:34
+12     5657255 rs3782619       G       A       .       PASS    AA=g;DP=104     GT:GQ:DP        0|0:62:26       0|1:100:16      0|0:100:61
+8      88948846        .       C       A       .       PASS    AA=C;DP=131     GT:GQ:DP        0|0:62:26       0|1:100:22      0|0:100:73
+7      31458661        rs28494178      C       T       .       PASS    AA=C;DP=128     GT:GQ:DP        0|0:62:26       0|1:100:29      0|0:100:71
+1      61851340        rs11207786      A       G       .       PASS    AA=A;DP=99;HM2;HM3      GT:GQ:DP        0|0:62:27       0|1:100:11      0|0:100:60
+1      206101762       rs1319388       C       A       .       PASS    AA=C;DP=136     GT:GQ:DP        0|0:62:27       0|1:100:33      0|0:100:79
+17     68484928        .       G       A       .       PASS    AA=G;DP=144     GT:GQ:DP        0|0:62:27       1|0:100:24      0|1:100:53
+1      65518258        rs11208618      T       C       .       PASS    AA=T;DP=121     GT:GQ:DP        0|0:62:28       1|0:100:20      0|1:100:73
+11     77423243        rs7479824       A       G       .       PASS    AA=A;DP=98      GT:GQ:DP        0|0:62:28       1|0:100:20      0|1:24:49
+8      123477668       .       C       A       .       PASS    AA=C;DP=142     GT:GQ:DP        0|0:62:28       1|0:100:28      0|1:100:85
+15     49944223        rs2554330       G       T       .       PASS    AA=G;DP=146     GT:GQ:DP        0|0:62:28       1|0:100:28      0|1:100:91
+20     60378868        rs2427299       C       T       .       PASS    AA=C;DP=82      GT:GQ:DP        0|0:62:28       1|1:5:13        0|1:100:36
+8      122049693       rs7843236       T       A       .       PASS    AA=A;DP=118     GT:GQ:DP        0|0:62:29       1|0:100:22      0|1:100:70
+11     117066229       .       T       C       .       PASS    AA=C;DP=111     GT:GQ:DP        0|0:62:29       1|1:52:20       0|1:100:62
+15     92635347        rs59377794      T       A       .       PASS    AA=A;DP=141     GT:GQ:DP        0|0:62:33       0|1:100:27      0|0:100:79
+2      137020986       rs1427683       T       G       .       PASS    AA=T;DP=145     GT:GQ:DP        0|0:62:35       0|1:100:21      0|0:100:42
+17     69813018        rs34392071      G       A       .       PASS    AA=G;DP=134     GT:GQ:DP        0|0:62:36       1|0:68:18       0|1:100:80
+16     79287147        rs8060994       C       T       .       PASS    AA=c;DP=103     GT:GQ:DP        0|0:63:21       1|1:18:17       0|1:100:62
+8      84159148        .       A       G       .       PASS    AA=A;DP=63      GT:GQ:DP        0|0:63:21       1|1:19:16       0|1:100:23
+1      186520617       rs2171398       C       A       .       PASS    AA=C;DP=82      GT:GQ:DP        0|0:63:21       1|1:24:18       0|1:100:42
+4      187025135       rs6846833       A       G       .       PASS    AA=G;DP=77      GT:GQ:DP        0|0:63:21       1|1:26:16       0|1:100:28
+8      70319609        rs898857        T       A       .       PASS    AA=T;DP=83      GT:GQ:DP        0|0:63:21       1|1:28:12       0|1:100:50
+3      17531473        .       A       T       .       PASS    AA=A;DP=85      GT:GQ:DP        0|0:63:21       1|1:28:22       0|1:100:42
+8      54243901        rs731239        T       C       .       PASS    AA=T;DP=92      GT:GQ:DP        0|0:63:21       1|1:30:24       0|1:100:47
+21     27986293        rs2831094       A       G       .       PASS    AA=A;DP=74      GT:GQ:DP        0|0:63:21       1|1:37:14       0|1:100:38
+6      15527790        rs2299051       A       G       .       PASS    AA=G;DP=83      GT:GQ:DP        0|0:63:21       1|1:37:14       0|1:100:48
+11     90443642        rs4396245       A       G       .       PASS    AA=G;DP=84      GT:GQ:DP        0|0:63:21       1|1:40:15       0|1:100:48
+4      36681138        rs2588538       G       A       .       PASS    AA=A;DP=90      GT:GQ:DP        0|0:63:21       1|1:40:15       0|1:100:52
+18     26116842        rs2949521       T       C       .       PASS    AA=T;DP=77      GT:GQ:DP        0|0:63:21       1|1:40:16       0|1:100:38
+21     40131180        rs56090566      A       G       .       PASS    AA=G;DP=80      GT:GQ:DP        0|0:63:21       1|1:40:16       0|1:100:42
+X      104421468       rs2752574       C       G       .       PASS    AA=G;DP=112     GT:GQ:DP        0|0:63:21       1|1:40:18       0|1:100:41
+20     8936412 rs6056327       C       T       .       PASS    AA=C;DP=105     GT:GQ:DP        0|0:63:21       1|1:43:16       0|1:100:67
+1      213969731       rs2488417       G       T       .       PASS    AA=G;DP=98      GT:GQ:DP        0|0:63:21       1|1:44:23       0|1:100:55
+3      163694186       rs62293966      T       C       .       PASS    AA=T;DP=84      GT:GQ:DP        0|0:63:21       1|1:46:17       0|1:100:46
+18     54479341        rs6566998       C       G       .       PASS    AA=G;DP=96      GT:GQ:DP        0|0:63:21       1|1:46:18       0|1:100:57
+20     48815555        rs12710319      T       C       .       PASS    AA=C;DP=98      GT:GQ:DP        0|0:63:21       1|1:46:18       0|1:100:60
+20     37468496        rs6093172       A       G       .       PASS    AA=A;DP=93      GT:GQ:DP        0|0:63:21       1|1:49:19       0|1:100:53
+4      58633626        rs7696035       C       T       .       PASS    AA=T;DP=95      GT:GQ:DP        0|0:63:21       1|1:49:19       0|1:100:54
+2      123439666       rs57465171      A       T       .       PASS    AA=A;DP=80      GT:GQ:DP        0|0:63:21       1|1:52:19       0|1:100:29
+9      25261340        rs10966826      A       T       .       PASS    AA=A;DP=82      GT:GQ:DP        0|0:63:21       1|1:52:19       0|1:100:29
+3      87778022        rs6776716       C       T       .       PASS    AA=T;DP=96      GT:GQ:DP        0|0:63:21       1|1:52:19       0|1:100:46
+2      140114411       rs16842715      C       T       .       PASS    AA=C;DP=97      GT:GQ:DP        0|0:63:21       1|1:52:19       0|1:100:54
+10     117348341       rs4498893       A       G       .       PASS    AA=A;DP=105     GT:GQ:DP        0|0:63:21       1|1:52:20       0|1:100:59
+4      142513357       rs11935614      G       A       .       PASS    AA=A;DP=114     GT:GQ:DP        0|0:63:21       1|1:52:20       0|1:100:71
+13     91007752        rs56038938      G       A       .       PASS    AA=G;DP=112     GT:GQ:DP        0|0:63:21       1|1:52:25       0|1:100:64
+20     38331069        rs10153982      A       G       .       PASS    AA=A;DP=124     GT:GQ:DP        0|0:63:21       1|1:53:31       0|1:100:72
+3      76884826        rs3883939       A       G       .       PASS    AA=A;DP=93      GT:GQ:DP        0|0:63:21       1|1:58:22       0|1:100:49
+1      186726879       rs12024764      T       A       .       PASS    AA=A;DP=94;HM2  GT:GQ:DP        0|0:63:21       1|1:61:22       0|1:100:54
+16     86027289        rs12918379      T       C       .       PASS    AA=T;DP=117     GT:GQ:DP        0|0:63:21       1|1:64:23       0|1:100:72
+8      4158194 rs10088254      T       C       .       PASS    AA=T;DP=115     GT:GQ:DP        0|0:63:21       1|1:64:23       0|1:100:73
+1      151084147       rs6695974       A       G       .       PASS    AA=A;DP=101;HM2 GT:GQ:DP        0|0:63:21       1|1:64:24       0|1:100:58
+2      36460286        rs6544008       T       C       .       PASS    AA=T;DP=114     GT:GQ:DP        0|0:63:21       1|1:64:24       0|1:100:72
+2      68265194        rs7556793       T       C       .       PASS    AA=T;DP=116     GT:GQ:DP        0|0:63:21       1|1:64:25       0|1:100:71
+4      52750124        rs6843398       T       C       .       PASS    AA=C;DP=111     GT:GQ:DP        0|0:63:21       1|1:67:24       0|1:100:65
+2      213393320       .       T       C       .       PASS    AA=C;DP=111     GT:GQ:DP        0|0:63:21       1|1:67:25       0|1:100:67
+4      14865918        rs4235374       T       C       .       PASS    AA=C;DP=111     GT:GQ:DP        0|0:63:21       1|1:76:28       0|1:100:63
+1      34378042        .       A       G       .       PASS    AA=A;DP=142     GT:GQ:DP        0|0:63:21       1|1:86:37       0|1:100:78
+4      155508100       rs1388078       G       T       .       PASS    AA=T;DP=95      GT:GQ:DP        0|0:63:21       1|1:88:31       0|1:100:42
+20     38108062        rs57562690      A       C       .       PASS    AA=A;DP=127     GT:GQ:DP        0|0:63:21       1|1:88:31       0|1:100:73
+6      4759760 .       A       G       .       PASS    AA=N;DP=122     GT:GQ:DP        0|0:63:22       1|0:100:18      0|1:100:80
+8      107683105       rs12678817      G       T       .       PASS    AA=T;DP=120     GT:GQ:DP        0|0:63:22       1|0:100:25      0|1:100:74
+X      97651641        rs16982862      A       G       .       PASS    AA=A;DP=151     GT:GQ:DP        0|0:63:22       1|1:100:38      0|1:100:51
+18     3641423 rs11081059      A       G       .       PASS    AA=N;DP=111     GT:GQ:DP        0|0:63:22       1|1:25:11       0|1:100:78
+3      156405027       rs7626407       T       C       .       PASS    AA=C;DP=85      GT:GQ:DP        0|0:63:22       1|1:28:11       0|1:100:40
+11     106592348       rs4754192       A       G       .       PASS    AA=A;DP=70      GT:GQ:DP        0|0:63:22       1|1:31:13       0|1:100:28
+6      103197753       rs9499198       A       G       .       PASS    AA=a;DP=71      GT:GQ:DP        0|0:63:22       1|1:37:14       0|1:100:24
+5      29404592        rs4867010       T       C       .       PASS    AA=C;DP=100     GT:GQ:DP        0|0:63:22       1|1:37:14       0|1:100:64
+18     23560796        rs2617946       A       G       .       PASS    AA=G;DP=86      GT:GQ:DP        0|0:63:22       1|1:40:15       0|1:100:37
+15     94145581        rs2639172       G       A       .       PASS    AA=G;DP=92      GT:GQ:DP        0|0:63:22       1|1:43:16       0|1:100:53
+7      132367042       rs7808471       T       C       .       PASS    AA=T;DP=81      GT:GQ:DP        0|0:63:22       1|1:43:17       0|1:100:40
+21     18890137        rs2824937       C       T       .       PASS    AA=T;DP=100     GT:GQ:DP        0|0:63:22       1|1:43:17       0|1:100:63
+19     49388097        rs2031033       A       G       .       PASS    AA=A;DP=127     GT:GQ:DP        0|0:63:22       1|1:48:29       0|1:100:62
+4      162723265       .       A       T       .       PASS    AA=A;DP=87      GT:GQ:DP        0|0:63:22       1|1:49:18       0|1:100:47
+7      103660862       rs193892        C       T       .       PASS    AA=C;DP=88      GT:GQ:DP        0|0:63:22       1|1:58:21       0|1:100:46
+12     33443900        rs7970142       T       C       .       PASS    AA=T;DP=97      GT:GQ:DP        0|0:63:22       1|1:58:21       0|1:100:54
+9      105472771       .       A       G       .       PASS    AA=A;DP=99      GT:GQ:DP        0|0:63:22       1|1:58:21       0|1:100:57
+6      41397226        rs647876        T       C       .       PASS    AA=C;DP=118     GT:GQ:DP        0|0:63:22       1|1:58:21       0|1:100:75
+3      146531421       .       C       T       .       PASS    AA=C;DP=96      GT:GQ:DP        0|0:63:22       1|1:64:24       0|1:100:36
+2      67813233        rs10865365      C       T       .       PASS    AA=C;DP=111     GT:GQ:DP        0|0:63:22       1|1:67:24       0|1:100:66
+2      53001607        rs62140287      G       C       .       PASS    AA=G;DP=92      GT:GQ:DP        0|0:63:22       1|1:70:26       0|1:100:42
+15     65943109        rs1982647       A       G       .       PASS    AA=a;DP=94      GT:GQ:DP        0|0:63:23       1|1:19:8        0|1:100:62
+11     10758111        rs11042959      T       G       .       PASS    AA=T;DP=105     GT:GQ:DP        0|0:63:23       1|1:34:23       0|1:100:59
+5      166837468       rs6555750       T       G       .       PASS    AA=T;DP=86      GT:GQ:DP        0|0:63:23       1|1:37:14       0|1:100:49
+12     125959339       rs11058858      C       T       .       PASS    AA=c;DP=80      GT:GQ:DP        0|0:63:23       1|1:46:17       0|1:100:40
+5      132098232       rs7732667       C       G       .       PASS    AA=G;DP=100     GT:GQ:DP        0|0:63:23       1|1:61:25       0|1:100:38
+2      153041759       rs16831174      G       A       .       PASS    AA=G;DP=106     GT:GQ:DP        0|0:63:24       1|1:49:19       0|1:100:62
+15     45944399        rs558454        T       C       .       PASS    AA=C;DP=117     GT:GQ:DP        0|0:63:25       0|1:100:17      0|0:100:75
+2      138342761       rs10803563      T       C       .       PASS    AA=T;DP=106     GT:GQ:DP        0|0:63:26       0|1:100:23      0|0:100:51
+21     18424048        rs11088667      A       G       .       PASS    AA=G;DP=102     GT:GQ:DP        0|0:63:26       1|0:100:18      0|1:100:60
+3      139317722       rs9874211       A       G       .       PASS    AA=G;DP=137     GT:GQ:DP        0|0:63:27       0|1:100:11      0|0:100:50
+6      21131943        .       G       A       .       PASS    AA=G;DP=94      GT:GQ:DP        0|0:63:27       0|1:100:11      0|0:100:56
+2      82118087        rs1521693       A       G       .       PASS    AA=A;DP=105     GT:GQ:DP        0|0:63:27       1|0:100:16      0|1:100:64
+10     128804969       .       C       G       .       PASS    AA=C;DP=109     GT:GQ:DP        0|0:63:27       1|0:100:27      0|1:100:61
+10     86593035        rs12240282      C       G       .       PASS    AA=C;DP=112     GT:GQ:DP        0|0:63:27       1|0:81:18       0|1:100:64
+14     62789336        .       G       A       .       PASS    AA=G;DP=111     GT:GQ:DP        0|0:63:27       1|1:55:20       0|1:100:65
+13     86122612        rs7981977       C       T       .       PASS    AA=C;DP=109     GT:GQ:DP        0|0:63:29       0|1:100:19      0|0:100:61
+1      168454588       rs10800508      A       G       .       PASS    AA=A;DP=134;HM2 GT:GQ:DP        0|0:63:29       0|1:100:25      0|0:100:79
+5      19495583        rs349468        G       T       .       PASS    AA=G;DP=93      GT:GQ:DP        0|0:63:30       1|0:100:15      0|1:100:48
+2      6484741 rs1350343       A       G       .       PASS    AA=A;DP=111     GT:GQ:DP        0|0:63:30       1|0:100:30      0|1:100:51
+2      166912130       .       C       A       .       PASS    AA=C;DP=127     GT:GQ:DP        0|0:63:30       1|0:71:24       0|1:100:74
+6      91663656        rs17616349      T       G       .       PASS    AA=T;DP=112     GT:GQ:DP        0|0:63:30       1|0:94:22       0|1:100:61
+2      241417954       rs4234121       T       G       .       PASS    AA=T;DP=110     GT:GQ:DP        0|0:63:31       0|1:100:18      0|0:100:62
+6      857611  rs9505484       C       G       .       PASS    AA=G;DP=128     GT:GQ:DP        0|0:63:31       0|1:100:18      0|0:100:78
+5      112493238       rs6859963       C       A       .       PASS    AA=C;DP=123     GT:GQ:DP        0|0:63:31       0|1:100:19      0|0:100:76
+16     17117524        .       G       C       .       PASS    AA=G;DP=116     GT:GQ:DP        0|0:63:31       0|1:100:21      0|0:100:65
+3      110580608       .       C       T       .       PASS    AA=C;DP=153     GT:GQ:DP        0|0:63:31       0|1:100:23      0|0:100:55
+16     84812255        .       C       T       .       PASS    AA=C;DP=136     GT:GQ:DP        0|0:63:31       0|1:100:29      0|0:100:76
+7      32362147        .       T       C       .       PASS    AA=C;DP=119     GT:GQ:DP        0|0:63:32       1|0:100:14      0|1:100:75
+8      117926119       rs16888878      C       T       .       PASS    AA=C;DP=149     GT:GQ:DP        0|0:63:32       1|0:100:22      0|1:100:91
+6      160741850       .       T       C       .       PASS    AA=T;DP=134     GT:GQ:DP        0|0:63:32       1|0:100:24      0|1:100:35
+15     68640964        rs28635167      C       T       .       PASS    AA=C;DP=122     GT:GQ:DP        0|0:63:32       1|0:100:24      0|1:100:66
+2      68393930        .       A       G       .       PASS    AA=A;DP=115     GT:GQ:DP        0|0:63:32       1|0:100:27      0|1:100:57
+6      133303904       rs7744266       G       T       .       PASS    AA=G;DP=156     GT:GQ:DP        0|0:63:32       1|0:100:29      0|1:100:89
+6      36350268        rs9368919       A       T       .       PASS    AA=A;DP=134     GT:GQ:DP        0|0:63:32       1|0:100:32      0|1:100:71
+14     94592360        .       A       C       .       PASS    AA=A;DP=142     GT:GQ:DP        0|0:63:32       1|0:84:25       0|1:100:87
+5      111622604       rs7713829       G       A       .       PASS    AA=G;DP=134     GT:GQ:DP        0|0:63:32       1|0:96:25       0|1:100:76
+3      41574920        rs1795353       C       A       .       PASS    AA=C;DP=123     GT:GQ:DP        0|0:63:32       1|0:99:26       0|1:100:64
+10     70865859        rs2082209       A       G       .       PASS    AA=G;DP=89      GT:GQ:DP        0|0:63:35       1|0:75:10       0|1:100:37
+4      70036652        .       G       A       .       PASS    AA=-;DP=126     GT:GQ:DP        0|0:63:39       0|1:100:31      0|0:85:57
+20     35583287        rs8114231       G       A       .       PASS    AA=G;DP=81      GT:GQ:DP        0|0:64:21       1|0:31:7        0|1:100:53
+2      79432610        rs12996920      T       C       .       PASS    AA=T;DP=79      GT:GQ:DP        0|0:64:21       1|0:3:16        0|1:100:43
+5      130578094       .       C       T       .       PASS    AA=C;DP=96      GT:GQ:DP        0|0:64:21       1|0:75:17       0|1:100:59
+2      53352125        .       T       C       .       PASS    AA=-;DP=113     GT:GQ:DP        0|0:64:21       1|0:76:29       0|1:100:60
+19     7169700 .       C       T       .       PASS    AA=c;DP=101     GT:GQ:DP        0|0:64:22       1|0:43:17       0|1:100:62
+16     27243928        rs1110470       G       A       .       PASS    AA=G;DP=75      GT:GQ:DP        0|0:64:22       1|0:67:5        0|1:100:48
+4      75419268        .       C       G       .       PASS    AA=C;DP=106     GT:GQ:DP        0|0:64:23       1|0:57:23       0|1:100:60
+17     63046464        rs2642035       C       T       .       PASS    AA=C;DP=97      GT:GQ:DP        0|0:64:23       1|0:65:11       0|1:100:65
+1      3519923 rs12070289      T       A       .       PASS    AA=T;DP=115     GT:GQ:DP        0|0:64:23       1|0:88:19       0|1:100:31
+13     57060499        rs17651056      T       A       .       PASS    AA=T;DP=100     GT:GQ:DP        0|0:64:25       0|1:100:19      0|0:100:52
+15     94553362        .       T       C       .       PASS    AA=T;DP=103     GT:GQ:DP        0|0:64:26       0|1:100:18      0|0:100:58
+16     82073354        rs57709386      G       A       .       PASS    AA=G;DP=148     GT:GQ:DP        0|0:64:26       0|1:100:25      0|0:100:96
+9      95514769        rs28688852      T       C       .       PASS    AA=T;DP=134     GT:GQ:DP        0|0:64:26       0|1:100:27      0|0:100:81
+3      26333045        rs13324925      T       A       .       PASS    AA=A;DP=96      GT:GQ:DP        0|0:64:26       1|0:100:17      0|1:100:53
+13     105452928       .       T       C       .       PASS    AA=T;DP=94      GT:GQ:DP        0|0:64:26       1|0:100:23      0|1:100:34
+16     64230811        rs7192734       T       C       .       PASS    AA=T;DP=104     GT:GQ:DP        0|0:64:26       1|0:91:22       0|1:100:59
+9      14404501        .       C       T       .       PASS    AA=C;DP=82      GT:GQ:DP        0|0:64:27       0|1:100:14      0|0:100:43
+18     5350989 .       G       A       .       PASS    AA=G;DP=114     GT:GQ:DP        0|0:64:27       1|0:100:27      0|1:100:57
+10     58344768        rs2393147       G       T       .       PASS    AA=N;DP=105     GT:GQ:DP        0|0:64:27       1|0:86:9        0|1:100:71
+6      55189620        rs9475199       T       A       .       PASS    AA=T;DP=105     GT:GQ:DP        0|0:64:27       1|0:93:21       0|1:100:55
+6      137689076       .       G       A       .       PASS    AA=G;DP=121     GT:GQ:DP        0|0:64:27       1|1:76:29       0|1:100:64
+1      235626156       rs6677656       T       C       .       PASS    AA=T;DP=115;HM2;HM3     GT:GQ:DP        0|0:64:28       1|0:100:23      0|1:100:48
+7      122240156       rs17144937      A       C       .       PASS    AA=C;DP=125     GT:GQ:DP        0|0:64:28       1|0:100:24      0|1:100:73
+2      229627321       rs12612162      C       T       .       PASS    AA=T;DP=123     GT:GQ:DP        0|0:64:28       1|1:40:16       0|1:100:81
+12     98442141        rs11109895      T       C       .       PASS    AA=C;DP=107     GT:GQ:DP        0|0:64:28       1|1:43:16       0|1:100:53
+17     15803146        rs60117866      G       A       .       PASS    AA=G;DP=121     GT:GQ:DP        0|0:64:28       1|1:52:20       0|1:100:71
+11     85852841        rs11234662      A       G       .       PASS    AA=A;DP=121     GT:GQ:DP        0|0:64:28       1|1:94:34       0|1:100:50
+1      81868815        rs17456745      C       A       .       PASS    AA=C;DP=115;HM2;HM3     GT:GQ:DP        0|0:64:29       1|0:100:23      0|1:100:62
+2      218758409       .       C       G       .       PASS    AA=C;DP=127     GT:GQ:DP        0|0:64:29       1|0:100:24      0|1:100:71
+1      178647089       .       A       C       .       PASS    AA=A;DP=130     GT:GQ:DP        0|0:64:29       1|0:100:31      0|1:100:70
+6      79257378        .       G       A       .       PASS    AA=G;DP=134     GT:GQ:DP        0|0:64:30       0|1:100:25      0|0:100:36
+17     57167782        .       C       A       .       PASS    AA=c;DP=92      GT:GQ:DP        0|0:64:30       1|0:100:18      0|1:100:33
+9      118165270       rs10817872      A       T       .       PASS    AA=A;DP=141     GT:GQ:DP        0|0:64:30       1|0:100:28      0|1:100:84
+12     1464490 .       G       A       .       PASS    AA=a;DP=110     GT:GQ:DP        0|0:64:31       1|0:64:16       0|1:100:64
+3      198615271       rs7630584       C       T       .       PASS    AA=C;DP=138     GT:GQ:DP        0|0:64:33       0|1:100:30      0|0:100:75
+19     52616533        rs12460626      G       A       .       PASS    AA=a;DP=131     GT:GQ:DP        0|0:64:33       1|1:67:24       0|1:100:63
+6      139009884       rs7769975       T       C       .       PASS    AA=T;DP=143     GT:GQ:DP        0|0:64:33       1|1:76:27       0|1:100:83
+8      138361049       rs6992584       G       T       .       PASS    AA=G;DP=166     GT:GQ:DP        0|0:64:34       0|1:100:37      0|0:100:96
+10     1682038 rs11250703      C       A       .       PASS    AA=C;DP=164     GT:GQ:DP        0|0:64:37       1|0:100:31      0|1:100:94
+6      21319431        rs9465998       C       A       .       PASS    AA=A;DP=171     GT:GQ:DP        0|0:64:37       1|1:22:24       0|1:100:62
+21     39081066        .       C       T       .       PASS    AA=C;DP=103     GT:GQ:DP        0|0:65:20       0|1:100:10      0|0:100:69
+11     61616136        rs2853011       A       G       .       PASS    AA=a;DP=74      GT:GQ:DP        0|0:65:20       0|1:100:12      0|0:90:30
+5      62717523        .       A       C       .       PASS    AA=A;DP=72      GT:GQ:DP        0|0:65:20       0|1:100:14      0|0:100:37
+7      121055685       rs17143576      A       C       .       PASS    AA=A;DP=79      GT:GQ:DP        0|0:65:20       0|1:100:14      0|0:100:45
+9      80259291        .       T       C       .       PASS    AA=T;DP=86      GT:GQ:DP        0|0:65:20       0|1:100:14      0|0:100:50
+11     41072778        .       T       C       .       PASS    AA=T;DP=83      GT:GQ:DP        0|0:65:20       0|1:100:14      0|0:100:51
+3      29679539        rs59657464      C       G       .       PASS    AA=C;DP=91      GT:GQ:DP        0|0:65:20       0|1:100:14      0|0:100:57
+4      134275812       rs13117667      C       T       .       PASS    AA=C;DP=90      GT:GQ:DP        0|0:65:20       0|1:100:14      0|0:100:57
+4      7928839 rs62289337      G       A       .       PASS    AA=T;DP=93      GT:GQ:DP        0|0:65:20       0|1:100:14      0|0:100:58
+5      94221071        .       G       A       .       PASS    AA=g;DP=94      GT:GQ:DP        0|0:65:20       0|1:100:14      0|0:100:63
+12     24510774        rs7969711       C       T       .       PASS    AA=C;DP=107     GT:GQ:DP        0|0:65:20       0|1:100:14      0|0:100:73
+6      29763369        rs3117308       A       C       .       PASS    AA=a;DP=111     GT:GQ:DP        0|0:65:20       0|1:100:15      0|0:100:39
+6      100076162       .       A       G       .       PASS    AA=A;DP=117     GT:GQ:DP        0|0:65:20       0|1:100:15      0|0:100:40
+17     74653465        rs55958010      C       G       .       PASS    AA=C;DP=90      GT:GQ:DP        0|0:65:20       0|1:100:15      0|0:100:42
+8      112579422       rs7846305       T       C       .       PASS    AA=T;DP=77      GT:GQ:DP        0|0:65:20       0|1:100:15      0|0:100:46
+1      219543599       rs4304588       C       T       .       PASS    AA=C;DP=85;HM2  GT:GQ:DP        0|0:65:20       0|1:100:15      0|0:100:54
+1      49528001        .       A       C       .       PASS    AA=A;DP=92      GT:GQ:DP        0|0:65:20       0|1:100:15      0|0:100:57
+5      150173912       .       G       A       .       PASS    AA=G;DP=90      GT:GQ:DP        0|0:65:20       0|1:100:15      0|0:100:57
+4      124562072       rs4600929       T       G       .       PASS    AA=T;DP=92      GT:GQ:DP        0|0:65:20       0|1:100:15      0|0:100:58
+2      179730484       rs11903685      A       G       .       PASS    AA=A;DP=96      GT:GQ:DP        0|0:65:20       0|1:100:15      0|0:100:62
+7      117902570       .       G       C       .       PASS    AA=G;DP=92      GT:GQ:DP        0|0:65:20       0|1:100:15      0|0:100:62
+4      76107515        .       A       G       .       PASS    AA=A;DP=74      GT:GQ:DP        0|0:65:20       0|1:100:15      0|0:90:30
+5      3112264 rs6859708       G       A       .       PASS    AA=G;DP=82      GT:GQ:DP        0|0:65:20       0|1:100:16      0|0:100:41
+2      227139856       .       T       C       .       PASS    AA=T;DP=81      GT:GQ:DP        0|0:65:20       0|1:100:16      0|0:100:46
+13     43383076        rs9316058       G       C       .       PASS    AA=G;DP=89      GT:GQ:DP        0|0:65:20       0|1:100:16      0|0:100:54
+2      63302654        rs10180262      A       G       .       PASS    AA=A;DP=92      GT:GQ:DP        0|0:65:20       0|1:100:16      0|0:100:55
+2      209464215       rs2364692       A       G       .       PASS    AA=G;DP=100     GT:GQ:DP        0|0:65:20       0|1:100:16      0|0:100:64
+14     23906655        rs28365903      C       G       .       PASS    AA=C;DP=103     GT:GQ:DP        0|0:65:20       0|1:100:16      0|0:100:69
+7      142742466       .       A       G       .       PASS    AA=A;DP=109     GT:GQ:DP        0|0:65:20       0|1:100:16      0|0:81:28
+4      180238449       rs7687838       G       T       .       PASS    AA=G;DP=92      GT:GQ:DP        0|0:65:20       0|1:100:17      0|0:100:38
+8      114894239       rs13272365      C       G       .       PASS    AA=C;DP=93      GT:GQ:DP        0|0:65:20       0|1:100:17      0|0:100:44
+7      40046486        rs10046564      T       C       .       PASS    AA=T;DP=79      GT:GQ:DP        0|0:65:20       0|1:100:17      0|0:100:46
+13     26903747        rs2760900       A       G       .       PASS    AA=G;DP=87      GT:GQ:DP        0|0:65:20       0|1:100:17      0|0:100:51
+13     68889629        .       A       T       .       PASS    AA=A;DP=91      GT:GQ:DP        0|0:65:20       0|1:100:17      0|0:100:54
+2      239710448       rs60964894      C       T       .       PASS    AA=C;DP=111     GT:GQ:DP        0|0:65:20       0|1:100:17      0|0:100:76
+4      149502967       rs12506058      G       A       .       PASS    AA=A;DP=113     GT:GQ:DP        0|0:65:20       0|1:100:17      0|0:100:77
+18     56195992        rs4310971       T       C       .       PASS    AA=T;DP=71      GT:GQ:DP        0|0:65:20       0|1:100:17      0|0:66:22
+13     25349103        .       A       C       .       PASS    AA=A;DP=74      GT:GQ:DP        0|0:65:20       0|1:100:18      0|0:100:37
+17     13207578        rs9897032       A       G       .       PASS    AA=A;DP=86      GT:GQ:DP        0|0:65:20       0|1:100:18      0|0:100:47
+2      76875641        rs10196216      A       G       .       PASS    AA=A;DP=94      GT:GQ:DP        0|0:65:20       0|1:100:18      0|0:100:54
+3      189968064       .       G       A       .       PASS    AA=G;DP=92      GT:GQ:DP        0|0:65:20       0|1:100:18      0|0:100:55
+5      19075980        rs11956219      T       A       .       PASS    AA=T;DP=95      GT:GQ:DP        0|0:65:20       0|1:100:18      0|0:100:55
+21     44476777        .       G       A       .       PASS    AA=G;DP=101     GT:GQ:DP        0|0:65:20       0|1:100:18      0|0:100:62
+4      91716305        rs28552866      A       G       .       PASS    AA=A;DP=100     GT:GQ:DP        0|0:65:20       0|1:100:18      0|0:100:62
+3      155221026       rs7616575       A       C       .       PASS    AA=C;DP=104     GT:GQ:DP        0|0:65:20       0|1:100:18      0|0:100:63
+18     5404699 rs9960193       C       T       .       PASS    AA=T;DP=102     GT:GQ:DP        0|0:65:20       0|1:100:18      0|0:100:64
+3      20995423        .       C       T       .       PASS    AA=C;DP=104     GT:GQ:DP        0|0:65:20       0|1:100:18      0|0:100:66
+8      76823761        .       G       A       .       PASS    AA=A;DP=105     GT:GQ:DP        0|0:65:20       0|1:100:18      0|0:100:67
+12     60376092        rs12422748      T       C       .       PASS    AA=T;DP=95      GT:GQ:DP        0|0:65:20       0|1:100:19      0|0:100:57
+11     38446123        .       C       A       .       PASS    AA=C;DP=98      GT:GQ:DP        0|0:65:20       0|1:100:19      0|0:100:58
+1      187258601       rs6428089       A       G       .       PASS    AA=A;DP=99;HM2  GT:GQ:DP        0|0:65:20       0|1:100:19      0|0:100:61
+1      208457357       .       T       C       .       PASS    AA=T;DP=109     GT:GQ:DP        0|0:65:20       0|1:100:19      0|0:100:71
+3      84922139        rs17430092      C       T       .       PASS    AA=C;DP=113     GT:GQ:DP        0|0:65:20       0|1:100:19      0|0:100:71
+5      174658874       rs34484967      G       A       .       PASS    AA=A;DP=112     GT:GQ:DP        0|0:65:20       0|1:100:19      0|0:100:71
+1      206734519       rs1072243       C       T       .       PASS    AA=C;DP=111     GT:GQ:DP        0|0:65:20       0|1:100:19      0|0:100:75
+2      217596503       .       A       G       .       PASS    AA=A;DP=124     GT:GQ:DP        0|0:65:20       0|1:100:20      0|0:100:39
+2      106604585       rs62152917      A       G       .       PASS    AA=.;DP=88      GT:GQ:DP        0|0:65:20       0|1:100:20      0|0:100:49
+2      9498670 rs61398270      A       G       .       PASS    AA=G;DP=95      GT:GQ:DP        0|0:65:20       0|1:100:20      0|0:100:54
+11     41554029        rs1824196       G       A       .       PASS    AA=A;DP=94      GT:GQ:DP        0|0:65:20       0|1:100:20      0|0:100:56
+4      64068321        .       A       C       .       PASS    AA=A;DP=100     GT:GQ:DP        0|0:65:20       0|1:100:20      0|0:100:59
+17     11021149        .       C       T       .       PASS    AA=c;DP=110     GT:GQ:DP        0|0:65:20       0|1:100:20      0|0:100:68
+1      96067326        .       C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        0|0:65:20       0|1:100:20      0|0:100:71
+4      143359589       rs17015754      A       G       .       PASS    AA=G;DP=113     GT:GQ:DP        0|0:65:20       0|1:100:20      0|0:100:74
+7      136541999       rs4732247       T       G       .       PASS    AA=T;DP=108     GT:GQ:DP        0|0:65:20       0|1:100:20      0|0:72:24
+3      56668879        .       C       A       .       PASS    AA=C;DP=117     GT:GQ:DP        0|0:65:20       0|1:100:21      0|0:100:36
+12     124136391       rs7306622       G       A       .       PASS    AA=g;DP=86      GT:GQ:DP        0|0:65:20       0|1:100:21      0|0:100:39
+8      68600173        rs6996113       C       T       .       PASS    AA=C;DP=89      GT:GQ:DP        0|0:65:20       0|1:100:21      0|0:100:48
+8      52450309        rs3097702       A       G       .       PASS    AA=A;DP=88      GT:GQ:DP        0|0:65:20       0|1:100:21      0|0:100:49
+7      109133416       .       T       C       .       PASS    AA=C;DP=91      GT:GQ:DP        0|0:65:20       0|1:100:21      0|0:100:50
+10     23545358        .       G       A       .       PASS    AA=G;DP=114     GT:GQ:DP        0|0:65:20       0|1:100:21      0|0:100:53
+3      197944106       rs3850647       T       C       .       PASS    AA=T;DP=91      GT:GQ:DP        0|0:65:20       0|1:100:21      0|0:100:53
+5      56359156        .       A       C       .       PASS    AA=A;DP=104     GT:GQ:DP        0|0:65:20       0|1:100:21      0|0:100:60
+21     17343221        rs2824191       C       T       .       PASS    AA=T;DP=122     GT:GQ:DP        0|0:65:20       0|1:100:21      0|0:100:77
+11     42807572        rs4755659       G       A       .       PASS    AA=G;DP=80      GT:GQ:DP        0|0:65:20       0|1:100:21      0|0:91:41
+15     91570820        .       A       G       .       PASS    AA=A;DP=95      GT:GQ:DP        0|0:65:20       0|1:100:22      0|0:100:53
+10     16319973        .       G       A       .       PASS    AA=G;DP=101     GT:GQ:DP        0|0:65:20       0|1:100:22      0|0:100:57
+2      135823948       rs16831547      A       G       .       PASS    AA=A;DP=104     GT:GQ:DP        0|0:65:20       0|1:100:22      0|0:100:58
+21     23447721        rs2827921       T       C       .       PASS    AA=T;DP=102     GT:GQ:DP        0|0:65:20       0|1:100:22      0|0:100:63
+4      43823708        rs3890818       T       C       .       PASS    AA=T;DP=107     GT:GQ:DP        0|0:65:20       0|1:100:22      0|0:100:64
+11     21152022        rs10500899      C       T       .       PASS    AA=C;DP=117     GT:GQ:DP        0|0:65:20       0|1:100:22      0|0:100:69
+13     50350972        rs7331605       A       C       .       PASS    AA=A;DP=110     GT:GQ:DP        0|0:65:20       0|1:100:22      0|0:100:72
+8      1748507 rs57235691      G       T       .       PASS    AA=G;DP=122     GT:GQ:DP        0|0:65:20       0|1:100:22      0|0:100:82
+3      175400363       rs1549100       G       T       .       PASS    AA=N;DP=119     GT:GQ:DP        0|0:65:20       0|1:100:23      0|0:100:36
+6      51762800        rs7755343       A       C       .       PASS    AA=C;DP=101     GT:GQ:DP        0|0:65:20       0|1:100:23      0|0:100:57
+6      126844830       rs9375442       A       C       .       PASS    AA=-;DP=105     GT:GQ:DP        0|0:65:20       0|1:100:23      0|0:100:62
+3      20868882        rs1499008       G       A       .       PASS    AA=G;DP=115     GT:GQ:DP        0|0:65:20       0|1:100:23      0|0:100:69
+1      187628056       .       A       G       .       PASS    AA=A;DP=117     GT:GQ:DP        0|0:65:20       0|1:100:23      0|0:100:72
+2      225033947       .       G       A       .       PASS    AA=G;DP=133     GT:GQ:DP        0|0:65:20       0|1:100:23      0|0:100:91
+18     12044718        rs4797615       G       A       .       PASS    AA=G;DP=108     GT:GQ:DP        0|0:65:20       0|1:100:23      0|0:75:25
+19     39715368        .       A       G       .       PASS    AA=a;DP=85      GT:GQ:DP        0|0:65:20       0|1:100:24      0|0:100:38
+7      82829842        .       T       A       .       PASS    AA=T;DP=85      GT:GQ:DP        0|0:65:20       0|1:100:24      0|0:100:43
+11     49480502        .       C       T       .       PASS    AA=c;DP=97      GT:GQ:DP        0|0:65:20       0|1:100:24      0|0:100:53
+3      118657713       .       G       A       .       PASS    AA=g;DP=131     GT:GQ:DP        0|0:65:20       0|1:100:24      0|0:100:75
+7      12601778        .       T       C       .       PASS    AA=T;DP=121     GT:GQ:DP        0|0:65:20       0|1:100:24      0|0:100:78
+9      112020036       rs28459704      C       A       .       PASS    AA=C;DP=127     GT:GQ:DP        0|0:65:20       0|1:100:24      0|0:100:84
+6      151814262       rs6906667       A       G       .       PASS    AA=A;DP=126     GT:GQ:DP        0|0:65:20       0|1:100:25      0|0:100:34
+1      238184811       .       G       A       .       PASS    AA=A;DP=152     GT:GQ:DP        0|0:65:20       0|1:100:25      0|0:100:52
+2      36324372        .       A       G       .       PASS    AA=A;DP=156     GT:GQ:DP        0|0:65:20       0|1:100:25      0|0:100:57
+7      142086643       .       T       C       .       PASS    AA=t;DP=108     GT:GQ:DP        0|0:65:20       0|1:100:25      0|0:100:64
+16     13028342        rs8056557       C       A       .       PASS    AA=C;DP=124     GT:GQ:DP        0|0:65:20       0|1:100:25      0|0:100:79
+2      176397298       rs1446798       G       A       .       PASS    AA=G;DP=137     GT:GQ:DP        0|0:65:20       0|1:100:25      0|0:100:80
+1      200058873       rs10920257      C       A       .       PASS    AA=C;DP=126     GT:GQ:DP        0|0:65:20       0|1:100:25      0|0:100:84
+X      49308777        rs12115961      C       T       .       PASS    AA=C;DP=132     GT:GQ:DP        0|0:65:20       0|1:100:26      0|0:100:50
+14     55153438        .       T       G       .       PASS    AA=T;DP=99      GT:GQ:DP        0|0:65:20       0|1:100:26      0|0:100:52
+15     53325841        rs16976218      G       A       .       PASS    AA=g;DP=100     GT:GQ:DP        0|0:65:20       0|1:100:26      0|0:100:59
+8      111589011       .       A       G       .       PASS    AA=A;DP=110     GT:GQ:DP        0|0:65:20       0|1:100:26      0|0:100:65
+3      68272602        .       T       C       .       PASS    AA=T;DP=129     GT:GQ:DP        0|0:65:20       0|1:100:26      0|0:100:73
+3      103327932       rs2252212       T       C       .       PASS    AA=C;DP=102     GT:GQ:DP        0|0:65:20       0|1:100:27      0|0:100:51
+18     48708255        rs8096807       C       T       .       PASS    AA=C;DP=104     GT:GQ:DP        0|0:65:20       0|1:100:27      0|0:100:59
+15     30872560        rs1258753       T       G       .       PASS    AA=T;DP=91      GT:GQ:DP        0|0:65:20       0|1:100:28      0|0:100:42
+11     127512099       rs57873573      C       A       .       PASS    AA=C;DP=131     GT:GQ:DP        0|0:65:20       0|1:100:28      0|0:100:46
+6      68297865        .       G       A       .       PASS    AA=.;DP=108     GT:GQ:DP        0|0:65:20       0|1:100:28      0|0:100:61
+4      65857837        rs12648422      T       A       .       PASS    AA=T;DP=114     GT:GQ:DP        0|0:65:20       0|1:100:28      0|0:100:64
+1      184585850       .       T       G       .       PASS    AA=T;DP=103     GT:GQ:DP        0|0:65:20       0|1:100:29      0|0:100:54
+3      34541378        .       C       T       .       PASS    AA=C;DP=126     GT:GQ:DP        0|0:65:20       0|1:100:29      0|0:100:60
+4      55344481        .       C       T       .       PASS    AA=-;DP=123     GT:GQ:DP        0|0:65:20       0|1:100:34      0|0:100:70
+4      190559929       rs10003243      G       T       .       PASS    AA=G;DP=93      GT:GQ:DP        0|0:65:20       0|1:100:8       0|0:100:66
+12     72088940        .       C       T       .       PASS    AA=C;DP=56      GT:GQ:DP        0|0:65:20       0|1:66:14       0|0:36:12
+2      168811274       .       G       A       .       PASS    AA=G;DP=65      GT:GQ:DP        0|0:65:20       0|1:80:8        0|0:80:34
+7      11935438        rs10257511      T       C       .       PASS    AA=T;DP=72      GT:GQ:DP        0|0:65:21       0|1:100:12      0|0:81:27
+3      115857625       rs9872833       T       G       .       PASS    AA=T;DP=106     GT:GQ:DP        0|0:65:21       0|1:100:12      0|0:93:31
+3      96626003        rs2222112       G       T       .       PASS    AA=G;DP=116     GT:GQ:DP        0|0:65:21       0|1:100:16      0|0:100:80
+2      30163698        rs10188501      C       G       .       PASS    AA=C;DP=91      GT:GQ:DP        0|0:65:21       0|1:100:17      0|0:100:53
+21     38723200        .       T       C       .       PASS    AA=N;DP=82      GT:GQ:DP        0|0:65:21       0|1:100:17      0|0:90:32
+2      58298772        .       G       A       .       PASS    AA=A;DP=91      GT:GQ:DP        0|0:65:21       0|1:100:18      0|0:100:54
+13     83458705        rs4551911       A       G       .       PASS    AA=A;DP=100     GT:GQ:DP        0|0:65:21       0|1:100:18      0|0:100:62
+6      126642272       rs605404        A       C       .       PASS    AA=C;DP=106     GT:GQ:DP        0|0:65:21       0|1:100:18      0|0:100:65
+5      28557258        rs10064651      G       C       .       PASS    AA=G;DP=87      GT:GQ:DP        0|0:65:21       0|1:100:18      0|0:96:34
+2      64611914        rs12713515      G       A       .       PASS    AA=G;DP=102     GT:GQ:DP        0|0:65:21       0|1:100:19      0|0:100:64
+2      129593223       rs12692086      G       C       .       PASS    AA=c;DP=120     GT:GQ:DP        0|0:65:21       0|1:100:19      0|0:100:69
+3      85669405        rs12493445      C       A       .       PASS    AA=C;DP=92      GT:GQ:DP        0|0:65:21       0|1:100:20      0|0:100:54
+11     124505380       .       T       C       .       PASS    AA=t;DP=112     GT:GQ:DP        0|0:65:21       0|1:100:20      0|0:100:70
+5      19006567        .       C       A       .       PASS    AA=C;DP=124     GT:GQ:DP        0|0:65:21       0|1:100:20      0|0:79:38
+3      172346932       rs16855900      A       G       .       PASS    AA=A;DP=130     GT:GQ:DP        0|0:65:21       0|1:100:22      0|0:100:41
+3      82578678        rs7644123       G       A       .       PASS    AA=G;DP=104     GT:GQ:DP        0|0:65:21       0|1:100:22      0|0:100:59
+3      117051872       rs11917989      C       T       .       PASS    AA=C;DP=112     GT:GQ:DP        0|0:65:21       0|1:100:22      0|0:100:69
+3      122143653       .       C       T       .       PASS    AA=C;DP=95      GT:GQ:DP        0|0:65:21       0|1:100:23      0|0:100:53
+6      102708755       .       T       G       .       PASS    AA=T;DP=114     GT:GQ:DP        0|0:65:21       0|1:100:23      0|0:100:69
+11     110275776       .       C       T       .       PASS    AA=C;DP=116     GT:GQ:DP        0|0:65:21       0|1:100:24      0|0:100:69
+6      154333536       .       C       T       .       PASS    AA=c;DP=86      GT:GQ:DP        0|0:65:21       0|1:100:25      0|0:100:41
+20     7828890 rs6077285       G       C       .       PASS    AA=N;DP=142     GT:GQ:DP        0|0:65:21       0|1:100:25      0|0:100:52
+5      74556782        .       A       G       .       PASS    AA=A;DP=100     GT:GQ:DP        0|0:65:21       0|1:100:25      0|0:100:53
+4      221744  rs2883229       G       C       .       PASS    AA=C;DP=104     GT:GQ:DP        0|0:65:21       0|1:100:25      0|0:100:54
+10     106025123       .       C       A       .       PASS    AA=C;DP=106     GT:GQ:DP        0|0:65:21       0|1:100:25      0|0:100:60
+21     38772288        .       T       A       .       PASS    AA=T;DP=105     GT:GQ:DP        0|0:65:21       0|1:100:25      0|0:100:61
+17     48138347        rs16951941      A       G       .       PASS    AA=G;DP=118     GT:GQ:DP        0|0:65:21       0|1:100:27      0|0:100:68
+8      66888693        .       A       T       .       PASS    AA=A;DP=141     GT:GQ:DP        0|0:65:21       0|1:100:28      0|0:100:43
+3      192000490       rs35311278      T       C       .       PASS    AA=T;DP=117     GT:GQ:DP        0|0:65:21       0|1:100:28      0|0:100:68
+13     89983348        rs7321992       A       G       .       PASS    AA=A;DP=119     GT:GQ:DP        0|0:65:21       0|1:100:32      0|0:100:66
+11     65310440        .       T       C       .       PASS    AA=T;DP=73      GT:GQ:DP        0|0:65:21       0|1:93:10       0|0:89:35
+12     52278918        .       A       G       .       PASS    AA=A;DP=88      GT:GQ:DP        0|0:65:21       1|0:100:14      0|1:100:54
+19     34075938        .       G       T       .       PASS    AA=G;DP=92      GT:GQ:DP        0|0:65:21       1|0:100:14      0|1:100:54
+14     52216973        rs12895181      T       C       .       PASS    AA=T;DP=69      GT:GQ:DP        0|0:65:21       1|0:100:15      0|1:100:20
+1      166854684       .       A       G       .       PASS    AA=A;DP=78      GT:GQ:DP        0|0:65:21       1|0:100:15      0|1:100:43
+15     69778307        rs9744430       C       G       .       PASS    AA=C;DP=86      GT:GQ:DP        0|0:65:21       1|0:100:15      0|1:100:52
+3      167266703       rs16850004      T       C       .       PASS    AA=T;DP=96      GT:GQ:DP        0|0:65:21       1|0:100:15      0|1:100:59
+9      30579621        rs10969763      A       T       .       PASS    AA=A;DP=76      GT:GQ:DP        0|0:65:21       1|0:100:16      0|1:100:14
+7      19678370        rs2390154       A       G       .       PASS    AA=A;DP=90      GT:GQ:DP        0|0:65:21       1|0:100:16      0|1:100:28
+8      12735104        .       C       T       .       PASS    AA=C;DP=75      GT:GQ:DP        0|0:65:21       1|0:100:16      0|1:100:28
+8      1086026 rs11136350      G       T       .       PASS    AA=T;DP=76      GT:GQ:DP        0|0:65:21       1|0:100:16      0|1:100:32
+8      84020502        rs57570399      G       A       .       PASS    AA=G;DP=74      GT:GQ:DP        0|0:65:21       1|0:100:16      0|1:100:37
+4      117773851       rs13126199      T       A       .       PASS    AA=A;DP=90      GT:GQ:DP        0|0:65:21       1|0:100:16      0|1:100:50
+7      71790693        .       G       A       .       PASS    AA=G;DP=93      GT:GQ:DP        0|0:65:21       1|0:100:16      0|1:100:56
+1      80907513        rs55979328      T       C       .       PASS    AA=T;DP=97      GT:GQ:DP        0|0:65:21       1|0:100:16      0|1:100:59
+5      77206490        rs57822438      G       C       .       PASS    AA=G;DP=96      GT:GQ:DP        0|0:65:21       1|0:100:16      0|1:100:61
+21     21425016        rs2826671       A       G       .       PASS    AA=a;DP=86      GT:GQ:DP        0|0:65:21       1|0:100:17      0|1:100:33
+4      105480094       .       A       G       .       PASS    AA=A;DP=78      GT:GQ:DP        0|0:65:21       1|0:100:17      0|1:100:38
+12     43267018        rs10736021      T       A       .       PASS    AA=T;DP=88      GT:GQ:DP        0|0:65:21       1|0:100:17      0|1:100:50
+6      92422257        .       C       T       .       PASS    AA=C;DP=95      GT:GQ:DP        0|0:65:21       1|0:100:17      0|1:100:59
+11     43148342        .       G       A       .       PASS    AA=G;DP=100     GT:GQ:DP        0|0:65:21       1|0:100:17      0|1:100:61
+5      33749281        rs11738025      G       C       .       PASS    AA=G;DP=74      GT:GQ:DP        0|0:65:21       1|0:100:18      0|1:100:36
+8      21972678        rs11994442      G       A       .       PASS    AA=G;DP=129     GT:GQ:DP        0|0:65:21       1|0:100:18      0|1:100:43
+13     65576610        .       G       C       .       PASS    AA=G;DP=87      GT:GQ:DP        0|0:65:21       1|0:100:18      0|1:100:48
+5      75359086        rs10041134      T       G       .       PASS    AA=T;DP=92      GT:GQ:DP        0|0:65:21       1|0:100:18      0|1:100:49
+9      28048390        rs7848726       G       A       .       PASS    AA=G;DP=92      GT:GQ:DP        0|0:65:21       1|0:100:18      0|1:100:51
+2      65244239        rs58044893      A       G       .       PASS    AA=A;DP=104     GT:GQ:DP        0|0:65:21       1|0:100:18      0|1:100:52
+4      32029335        .       G       C       .       PASS    AA=G;DP=100     GT:GQ:DP        0|0:65:21       1|0:100:18      0|1:100:61
+7      107274625       rs55695134      A       G       .       PASS    AA=A;DP=103     GT:GQ:DP        0|0:65:21       1|0:100:18      0|1:100:65
+7      31701956        rs60396828      C       A       .       PASS    AA=C;DP=72      GT:GQ:DP        0|0:65:21       1|0:100:19      0|1:100:20
+18     1560265 rs12456488      A       G       .       PASS    AA=A;DP=103     GT:GQ:DP        0|0:65:21       1|0:100:19      0|1:100:62
+4      67486710        .       G       T       .       PASS    AA=G;DP=108     GT:GQ:DP        0|0:65:21       1|0:100:19      0|1:100:66
+9      125213373       rs16926471      T       C       .       PASS    AA=T;DP=123     GT:GQ:DP        0|0:65:21       1|0:100:19      0|1:100:84
+4      142219032       rs10026600      G       A       .       PASS    AA=A;DP=123     GT:GQ:DP        0|0:65:21       1|0:100:19      0|1:100:86
+6      163319285       rs57020951      G       A       .       PASS    AA=A;DP=86      GT:GQ:DP        0|0:65:21       1|0:100:20      0|1:100:37
+17     6758930 .       A       G       .       PASS    AA=a;DP=93      GT:GQ:DP        0|0:65:21       1|0:100:20      0|1:100:50
+13     76743195        .       T       C       .       PASS    AA=T;DP=103     GT:GQ:DP        0|0:65:21       1|0:100:20      0|1:100:61
+1      93611088        rs12411095      A       T       .       PASS    AA=A;DP=110;HM2;HM3     GT:GQ:DP        0|0:65:21       1|0:100:20      0|1:100:68
+7      126047835       .       C       A       .       PASS    AA=c;DP=114     GT:GQ:DP        0|0:65:21       1|0:100:20      0|1:100:71
+9      116542063       rs2185935       C       T       .       PASS    AA=C;DP=113     GT:GQ:DP        0|0:65:21       1|0:100:20      0|1:100:72
+5      121660410       .       G       A       .       PASS    AA=A;DP=128     GT:GQ:DP        0|0:65:21       1|0:100:20      0|1:100:86
+12     22338997        rs7307537       C       G       .       PASS    AA=C;DP=82      GT:GQ:DP        0|0:65:21       1|0:100:21      0|1:100:29
+9      79434650        rs12344547      T       G       .       PASS    AA=T;DP=89      GT:GQ:DP        0|0:65:21       1|0:100:21      0|1:100:49
+7      129050796       .       A       G       .       PASS    AA=A;DP=101     GT:GQ:DP        0|0:65:21       1|0:100:21      0|1:100:56
+14     24054151        .       G       A       .       PASS    AA=G;DP=94      GT:GQ:DP        0|0:65:21       1|0:100:22      0|1:100:51
+1      167205796       .       A       G       .       PASS    AA=A;DP=95      GT:GQ:DP        0|0:65:21       1|0:100:22      0|1:100:53
+13     36750265        rs4941859       A       G       .       PASS    AA=A;DP=99      GT:GQ:DP        0|0:65:21       1|0:100:22      0|1:100:54
+9      72113010        rs58720670      T       C       .       PASS    AA=T;DP=104     GT:GQ:DP        0|0:65:21       1|0:100:22      0|1:100:61
+4      35788544        .       C       G       .       PASS    AA=C;DP=110     GT:GQ:DP        0|0:65:21       1|0:100:22      0|1:100:65
+12     59394777        rs182129        A       C       .       PASS    AA=A;DP=108     GT:GQ:DP        0|0:65:21       1|0:100:22      0|1:100:66
+15     51122801        rs28858755      C       T       .       PASS    AA=T;DP=112     GT:GQ:DP        0|0:65:21       1|0:100:22      0|1:100:69
+12     40220704        rs389166        G       T       .       PASS    AA=G;DP=85      GT:GQ:DP        0|0:65:21       1|0:100:23      0|1:100:40
+1      181242651       rs4575047       A       G       .       PASS    AA=A;DP=95;HM2  GT:GQ:DP        0|0:65:21       1|0:100:23      0|1:100:46
+4      130839878       .       C       G       .       PASS    AA=C;DP=100     GT:GQ:DP        0|0:65:21       1|0:100:23      0|1:100:57
+2      195565171       .       G       A       .       PASS    AA=g;DP=112     GT:GQ:DP        0|0:65:21       1|0:100:23      0|1:100:58
+11     104653099       .       G       A       .       PASS    AA=a;DP=111     GT:GQ:DP        0|0:65:21       1|0:100:23      0|1:100:66
+11     75285907        .       A       C       .       PASS    AA=N;DP=108     GT:GQ:DP        0|0:65:21       1|0:100:23      0|1:100:67
+5      11959448        rs6554656       C       A       .       PASS    AA=C;DP=113     GT:GQ:DP        0|0:65:21       1|0:100:23      0|1:100:69
+5      140813560       .       A       G       .       PASS    AA=A;DP=111     GT:GQ:DP        0|0:65:21       1|0:100:23      0|1:100:69
+9      4205542 rs12006019      C       T       .       PASS    AA=C;DP=124     GT:GQ:DP        0|0:65:21       1|0:100:23      0|1:100:77
+3      12616425        rs5746223       T       C       .       PASS    AA=T;DP=84      GT:GQ:DP        0|0:65:21       1|0:100:24      0|1:100:39
+4      131929931       .       A       C       .       PASS    AA=A;DP=94      GT:GQ:DP        0|0:65:21       1|0:100:24      0|1:100:50
+5      144947144       rs60762736      T       C       .       PASS    AA=T;DP=106     GT:GQ:DP        0|0:65:21       1|0:100:24      0|1:100:62
+9      82981075        rs9785307       A       G       .       PASS    AA=A;DP=109     GT:GQ:DP        0|0:65:21       1|0:100:24      0|1:100:67
+4      186129379       rs6826396       G       A       .       PASS    AA=G;DP=112     GT:GQ:DP        0|0:65:21       1|0:100:24      0|1:100:68
+21     43237327        rs8132202       T       G       .       PASS    AA=T;DP=125     GT:GQ:DP        0|0:65:21       1|0:100:24      0|1:100:80
+6      82898522        rs4294052       C       A       .       PASS    AA=C;DP=88      GT:GQ:DP        0|0:65:21       1|0:100:25      0|1:100:28
+3      195879124       rs9879555       A       G       .       PASS    AA=A;DP=95      GT:GQ:DP        0|0:65:21       1|0:100:25      0|1:100:52
+2      128977496       rs6751818       G       A       .       PASS    AA=g;DP=160     GT:GQ:DP        0|0:65:21       1|0:100:25      0|1:100:64
+3      117399780       .       G       A       .       PASS    AA=g;DP=113     GT:GQ:DP        0|0:65:21       1|0:100:25      0|1:100:71
+10     56249895        .       G       C       .       PASS    AA=G;DP=128     GT:GQ:DP        0|0:65:21       1|0:100:26      0|1:100:37
+13     50277603        .       T       G       .       PASS    AA=T;DP=99      GT:GQ:DP        0|0:65:21       1|0:100:26      0|1:100:52
+3      124016207       rs6797815       A       G       .       PASS    AA=A;DP=99      GT:GQ:DP        0|0:65:21       1|0:100:26      0|1:100:53
+17     67399154        .       C       A       .       PASS    AA=C;DP=108     GT:GQ:DP        0|0:65:21       1|0:100:26      0|1:100:60
+7      126479998       rs17862273      G       C       .       PASS    AA=C;DP=106     GT:GQ:DP        0|0:65:21       1|0:100:26      0|1:100:63
+4      130709946       rs17050551      G       A       .       PASS    AA=G;DP=112     GT:GQ:DP        0|0:65:21       1|0:100:26      0|1:100:69
+11     84917210        .       A       T       .       PASS    AA=T;DP=119     GT:GQ:DP        0|0:65:21       1|0:100:26      0|1:100:71
+3      99439209        rs33997886      C       A       .       PASS    AA=A;DP=86      GT:GQ:DP        0|0:65:21       1|0:100:27      0|1:100:38
+7      8485413 .       C       T       .       PASS    AA=c;DP=98      GT:GQ:DP        0|0:65:21       1|0:100:27      0|1:100:50
+5      18932350        .       C       T       .       PASS    AA=C;DP=112     GT:GQ:DP        0|0:65:21       1|0:100:27      0|1:100:65
+11     88887449        .       G       A       .       PASS    AA=G;DP=111     GT:GQ:DP        0|0:65:21       1|0:100:27      0|1:100:68
+11     15310673        rs4304758       C       T       .       PASS    AA=c;DP=119     GT:GQ:DP        0|0:65:21       1|0:100:27      0|1:100:73
+15     99309283        .       G       A       .       PASS    AA=G;DP=122     GT:GQ:DP        0|0:65:21       1|0:100:27      0|1:100:74
+12     12446729        .       A       C       .       PASS    AA=A;DP=139     GT:GQ:DP        0|0:65:21       1|0:100:27      0|1:100:90
+7      53263108        rs4541849       A       C       .       PASS    AA=A;DP=93      GT:GQ:DP        0|0:65:21       1|0:100:28      0|1:100:34
+2      212417036       .       T       C       .       PASS    AA=T;DP=85      GT:GQ:DP        0|0:65:21       1|0:100:28      0|1:100:38
+2      181506623       rs4331462       A       G       .       PASS    AA=A;DP=104     GT:GQ:DP        0|0:65:21       1|0:100:28      0|1:100:53
+10     57164796        rs2384675       G       A       .       PASS    AA=A;DP=102     GT:GQ:DP        0|0:65:21       1|0:100:28      0|1:100:55
+5      119723560       .       A       G       .       PASS    AA=A;DP=111     GT:GQ:DP        0|0:65:21       1|0:100:28      0|1:100:62
+7      141501821       rs36013870      T       C       .       PASS    AA=C;DP=115     GT:GQ:DP        0|0:65:21       1|0:100:28      0|1:100:64
+11     130261842       rs1893018       T       C       .       PASS    AA=C;DP=130     GT:GQ:DP        0|0:65:21       1|0:100:28      0|1:100:80
+X      38114452        rs5917203       A       G       .       PASS    AA=A;DP=118     GT:GQ:DP        0|0:65:21       1|0:100:29      0|1:100:34
+10     57947874        rs11005383      T       C       .       PASS    AA=T;DP=117     GT:GQ:DP        0|0:65:21       1|0:100:29      0|1:100:68
+13     80713505        .       T       C       .       PASS    AA=T;DP=118     GT:GQ:DP        0|0:65:21       1|0:100:30      0|1:100:70
+15     27998649        rs1719339       T       C       .       PASS    AA=T;DP=125     GT:GQ:DP        0|0:65:21       1|0:100:31      0|1:100:72
+9      10977774        rs10959437      C       T       .       PASS    AA=C;DP=128     GT:GQ:DP        0|0:65:21       1|0:100:31      0|1:100:76
+2      81912722        rs34870817      T       C       .       PASS    AA=C;DP=139     GT:GQ:DP        0|0:65:21       1|0:100:34      0|1:100:73
+7      113979567       .       A       G       .       PASS    AA=C;DP=97      GT:GQ:DP        0|0:65:21       1|0:100:36      0|1:100:41
+17     67257161        rs8065499       G       A       .       PASS    AA=G;DP=111     GT:GQ:DP        0|0:65:21       1|0:100:37      0|1:100:43
+2      104455661       .       T       A       .       PASS    AA=T;DP=124     GT:GQ:DP        0|0:65:21       1|0:100:39      0|1:100:64
+3      122976475       rs7621417       T       A       .       PASS    AA=T;DP=72      GT:GQ:DP        0|0:65:21       1|0:100:9       0|1:100:42
+17     67205435        .       G       A       .       PASS    AA=g;DP=100     GT:GQ:DP        0|0:65:21       1|0:33:11       0|1:100:67
+10     42920120        .       A       C       .       PASS    AA=A;DP=74      GT:GQ:DP        0|0:65:21       1|0:34:8        0|1:100:35
+3      52243874        .       G       C       .       PASS    AA=G;DP=128     GT:GQ:DP        0|0:65:21       1|0:38:15       0|1:100:92
+1      23654604        .       G       A       .       PASS    AA=G;DP=85      GT:GQ:DP        0|0:65:21       1|0:38:9        0|1:100:56
+20     55860019        .       C       T       .       PASS    AA=C;DP=93      GT:GQ:DP        0|0:65:21       1|0:45:12       0|1:100:59
+14     103956160       .       T       C       .       PASS    AA=T;DP=92      GT:GQ:DP        0|0:65:21       1|0:49:20       0|1:100:52
+3      167803839       rs60036272      T       G       .       PASS    AA=T;DP=93      GT:GQ:DP        0|0:65:21       1|0:50:22       0|1:100:51
+13     34992728        .       A       C       .       PASS    AA=A;DP=112     GT:GQ:DP        0|0:65:21       1|0:55:18       0|1:100:71
+X      4618816 .       C       G       .       PASS    AA=c;DP=101     GT:GQ:DP        0|0:65:21       1|0:58:19       0|1:100:30
+4      132723944       rs60859143      A       G       .       PASS    AA=A;DP=111     GT:GQ:DP        0|0:65:21       1|0:59:21       0|1:100:69
+20     12675515        .       G       C       .       PASS    AA=G;DP=85      GT:GQ:DP        0|0:65:21       1|0:67:18       0|1:100:47
+14     91667948        rs61357762      G       A       .       PASS    AA=g;DP=74      GT:GQ:DP        0|0:65:21       1|0:70:13       0|1:46:28
+3      153531652       rs17303682      C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        0|0:65:21       1|0:70:22       0|1:100:68
+3      97603984        rs62258264      G       A       .       PASS    AA=G;DP=87      GT:GQ:DP        0|0:65:21       1|0:71:16       0|1:100:51
+4      131779333       .       A       G       .       PASS    AA=A;DP=86      GT:GQ:DP        0|0:65:21       1|0:75:18       0|1:100:48
+22     39041063        .       A       G       .       PASS    AA=A;DP=83      GT:GQ:DP        0|0:65:21       1|0:79:13       0|1:100:49
+12     640497  rs57952598      C       T       .       PASS    AA=c;DP=100     GT:GQ:DP        0|0:65:21       1|0:79:16       0|1:100:63
+19     42431457        .       A       G       .       PASS    AA=a;DP=88      GT:GQ:DP        0|0:65:21       1|0:81:15       0|1:100:51
+6      63148286        .       G       A       .       PASS    AA=G;DP=111     GT:GQ:DP        0|0:65:21       1|0:82:18       0|1:100:24
+6      78352083        .       C       T       .       PASS    AA=C;DP=71      GT:GQ:DP        0|0:65:21       1|0:85:14       0|1:100:27
+13     60526566        rs17234146      T       C       .       PASS    AA=T;DP=117     GT:GQ:DP        0|0:65:21       1|0:85:14       0|1:100:44
+12     12380089        rs61922041      C       A       .       PASS    AA=c;DP=93      GT:GQ:DP        0|0:65:21       1|0:86:11       0|1:100:61
+8      31783412        .       A       G       .       PASS    AA=A;DP=94      GT:GQ:DP        0|0:65:21       1|0:86:17       0|1:100:50
+2      83283975        rs6705434       G       C       .       PASS    AA=C;DP=125     GT:GQ:DP        0|0:65:21       1|0:87:29       0|1:100:73
+16     72325185        rs28692599      G       A       .       PASS    AA=g;DP=94      GT:GQ:DP        0|0:65:21       1|0:89:20       0|1:100:53
+11     4741603 .       A       G       .       PASS    AA=A;DP=105     GT:GQ:DP        0|0:65:21       1|0:89:24       0|1:100:59
+4      169426431       rs60194845      G       A       .       PASS    AA=G;DP=88      GT:GQ:DP        0|0:65:21       1|0:90:14       0|1:100:53
+4      52692670        rs10032290      A       T       .       PASS    AA=A;DP=87      GT:GQ:DP        0|0:65:21       1|0:91:15       0|1:100:51
+13     65206970        .       G       A       .       PASS    AA=G;DP=76      GT:GQ:DP        0|0:65:21       1|0:93:14       0|1:100:41
+2      166171564       rs13412684      T       C       .       PASS    AA=C;DP=100     GT:GQ:DP        0|0:65:21       1|0:93:22       0|1:100:58
+2      97904537        rs1922280       C       G       .       PASS    AA=G;DP=115     GT:GQ:DP        0|0:65:21       1|0:93:22       0|1:100:71
+1      156465552       rs625547        T       C       .       PASS    AA=C;DP=109     GT:GQ:DP        0|0:65:21       1|0:95:19       0|1:100:70
+8      58273696        rs16921831      G       A       .       PASS    AA=g;DP=101     GT:GQ:DP        0|0:65:21       1|0:96:13       0|1:100:68
+11     40400565        rs885283        G       A       .       PASS    AA=G;DP=70      GT:GQ:DP        0|0:65:21       1|0:97:15       0|1:100:29
+3      167565687       rs9821436       G       A       .       PASS    AA=G;DP=102     GT:GQ:DP        0|0:65:21       1|0:98:19       0|1:100:62
+3      163062708       rs1388701       G       A       .       PASS    AA=G;DP=92      GT:GQ:DP        0|0:65:21       1|0:99:17       0|1:100:55
+4      136630203       rs11099345      A       G       .       PASS    AA=A;DP=94      GT:GQ:DP        0|0:65:21       1|0:99:20       0|1:100:53
+18     72975173        rs1789094       C       T       .       PASS    AA=C;DP=118     GT:GQ:DP        0|0:65:22       0|1:100:14      0|0:100:85
+1      104551938       .       G       A       .       PASS    AA=g;DP=88      GT:GQ:DP        0|0:65:22       0|1:100:16      0|0:100:51
+16     24201611        rs9933084       C       G       .       PASS    AA=C;DP=117     GT:GQ:DP        0|0:65:22       0|1:100:20      0|0:87:29
+12     75603273        .       G       A       .       PASS    AA=G;DP=131     GT:GQ:DP        0|0:65:22       0|1:100:22      0|0:100:74
+7      49422835        .       C       G       .       PASS    AA=C;DP=105     GT:GQ:DP        0|0:65:22       0|1:100:25      0|0:100:52
+7      103303350       rs7784567       C       T       .       PASS    AA=C;DP=136     GT:GQ:DP        0|0:65:22       0|1:100:26      0|0:100:42
+1      165393531       rs16858586      C       G       .       PASS    AA=C;DP=133     GT:GQ:DP        0|0:65:22       0|1:100:28      0|0:100:86
+1      148493380       .       T       A       .       PASS    AA=T;DP=87      GT:GQ:DP        0|0:65:22       1|0:100:12      0|1:100:52
+11     89764833        rs562727        G       A       .       PASS    AA=G;DP=87      GT:GQ:DP        0|0:65:22       1|0:100:13      0|1:100:52
+10     68442782        rs60834770      G       A       .       PASS    AA=G;DP=97      GT:GQ:DP        0|0:65:22       1|0:100:13      0|1:100:64
+3      153711697       rs1879812       C       T       .       PASS    AA=T;DP=82      GT:GQ:DP        0|0:65:22       1|0:100:14      0|1:100:47
+21     26449617        rs1788285       T       A       .       PASS    AA=T;DP=86      GT:GQ:DP        0|0:65:22       1|0:100:16      0|1:100:37
+2      52404235        .       G       C       .       PASS    AA=G;DP=94      GT:GQ:DP        0|0:65:22       1|0:100:17      0|1:100:52
+8      10141502        rs2952223       A       G       .       PASS    AA=G;DP=98      GT:GQ:DP        0|0:65:22       1|0:100:18      0|1:100:59
+3      190967398       .       A       G       .       PASS    AA=A;DP=107     GT:GQ:DP        0|0:65:22       1|0:100:18      0|1:100:61
+4      72637643        rs16846566      T       G       .       PASS    AA=T;DP=94      GT:GQ:DP        0|0:65:22       1|0:100:19      0|1:100:52
+8      62781896        rs28793942      T       C       .       PASS    AA=C;DP=101     GT:GQ:DP        0|0:65:22       1|0:100:19      0|1:100:61
+2      169565812       rs6733156       C       T       .       PASS    AA=T;DP=108     GT:GQ:DP        0|0:65:22       1|0:100:19      0|1:100:69
+18     25233986        .       C       G       .       PASS    AA=C;DP=114     GT:GQ:DP        0|0:65:22       1|0:100:19      0|1:100:74
+18     36502074        rs9304231       G       A       .       PASS    AA=G;DP=99      GT:GQ:DP        0|0:65:22       1|0:100:20      0|1:100:57
+10     17122557        rs10508519      T       C       .       PASS    AA=T;DP=93      GT:GQ:DP        0|0:65:22       1|0:100:21      0|1:100:50
+21     31362970        rs7281491       A       G       .       PASS    AA=A;DP=106     GT:GQ:DP        0|0:65:22       1|0:100:21      0|1:100:65
+4      178317433       .       C       T       .       PASS    AA=c;DP=102     GT:GQ:DP        0|0:65:22       1|0:100:22      0|1:100:59
+11     72630048        rs4382936       A       C       .       PASS    AA=C;DP=112     GT:GQ:DP        0|0:65:22       1|0:100:22      0|1:100:66
+20     40397436        .       T       C       .       PASS    AA=T;DP=124     GT:GQ:DP        0|0:65:22       1|0:100:22      0|1:100:67
+7      82873875        rs2722981       A       T       .       PASS    AA=A;DP=81      GT:GQ:DP        0|0:65:22       1|0:100:23      0|1:100:29
+11     27345486        rs2447995       T       C       .       PASS    AA=T;DP=105     GT:GQ:DP        0|0:65:22       1|0:100:23      0|1:100:61
+14     27924266        rs10132216      G       A       .       PASS    AA=G;DP=85      GT:GQ:DP        0|0:65:22       1|0:100:24      0|1:100:37
+8      4213369 rs1595465       G       C       .       PASS    AA=G;DP=103     GT:GQ:DP        0|0:65:22       1|0:100:24      0|1:100:57
+4      114194539       rs313944        C       A       .       PASS    AA=C;DP=112     GT:GQ:DP        0|0:65:22       1|0:100:25      0|1:100:65
+7      24834007        rs916860        C       T       .       PASS    AA=C;DP=129     GT:GQ:DP        0|0:65:22       1|0:100:25      0|1:100:83
+3      30511547        rs4305451       C       G       .       PASS    AA=c;DP=101     GT:GQ:DP        0|0:65:22       1|0:100:26      0|1:100:40
+21     24335705        .       A       T       .       PASS    AA=A;DP=127     GT:GQ:DP        0|0:65:22       1|0:100:26      0|1:100:75
+13     86971687        .       A       G       .       PASS    AA=A;DP=100     GT:GQ:DP        0|0:65:22       1|0:100:27      0|1:100:39
+7      12866812        rs10233379      A       G       .       PASS    AA=A;DP=118     GT:GQ:DP        0|0:65:22       1|0:100:27      0|1:100:71
+2      37300310        .       G       C       .       PASS    AA=G;DP=125     GT:GQ:DP        0|0:65:22       1|0:100:28      0|1:100:35
+2      58084375        .       T       C       .       PASS    AA=T;DP=120     GT:GQ:DP        0|0:65:22       1|0:100:28      0|1:100:67
+22     34900884        rs132674        C       T       .       PASS    AA=.;DP=128     GT:GQ:DP        0|0:65:22       1|0:100:28      0|1:100:75
+X      11541524        rs5979434       C       T       .       PASS    AA=T;DP=149     GT:GQ:DP        0|0:65:22       1|0:100:29      0|1:100:55
+9      97542742        rs7035549       C       T       .       PASS    AA=C;DP=131     GT:GQ:DP        0|0:65:22       1|0:100:29      0|1:100:81
+16     6080164 rs9930996       A       C       .       PASS    AA=A;DP=144     GT:GQ:DP        0|0:65:22       1|0:100:34      0|1:100:88
+X      13396714        rs12392849      C       G       .       PASS    AA=C;DP=156     GT:GQ:DP        0|0:65:22       1|0:100:38      0|1:100:58
+6      103217873       .       A       C       .       PASS    AA=A;DP=84      GT:GQ:DP        0|0:65:22       1|0:32:16       0|1:100:47
+12     106362879       .       G       A       .       PASS    AA=G;DP=91      GT:GQ:DP        0|0:65:22       1|0:39:14       0|1:100:50
+3      7725827 .       G       A       .       PASS    AA=G;DP=128     GT:GQ:DP        0|0:65:22       1|0:40:20       0|1:100:35
+9      103859353       rs16921199      T       C       .       PASS    AA=C;DP=95      GT:GQ:DP        0|0:65:22       1|0:40:24       0|1:100:49
+4      3421169 .       C       T       .       PASS    AA=C;DP=106     GT:GQ:DP        0|0:65:22       1|0:42:14       0|1:100:61
+15     22878508        .       T       C       .       PASS    AA=-;DP=102     GT:GQ:DP        0|0:65:22       1|0:44:20       0|1:100:60
+8      72480562        rs35198871      C       T       .       PASS    AA=C;DP=126     GT:GQ:DP        0|0:65:22       1|0:62:23       0|1:100:82
+20     44172909        rs58917883      G       A       .       PASS    AA=G;DP=114     GT:GQ:DP        0|0:65:22       1|0:63:18       0|1:100:72
+5      162190029       .       G       A       .       PASS    AA=G;DP=90      GT:GQ:DP        0|0:65:22       1|0:68:13       0|1:100:55
+2      66664526        rs1035167       G       A       .       PASS    AA=G;DP=103     GT:GQ:DP        0|0:65:22       1|0:69:26       0|1:100:56
+20     18337277        rs2182773       A       T       .       PASS    AA=A;DP=92      GT:GQ:DP        0|0:65:22       1|0:72:18       0|1:100:53
+17     43141839        .       C       T       .       PASS    AA=C;DP=67      GT:GQ:DP        0|0:65:22       1|0:72:9        0|1:100:30
+1      70174008        rs60763236      G       A       .       PASS    AA=G;DP=100     GT:GQ:DP        0|0:65:22       1|0:73:13       0|1:100:60
+1      215881353       rs4634971       T       C       .       PASS    AA=C;DP=110;HM2 GT:GQ:DP        0|0:65:22       1|0:73:18       0|1:100:69
+3      138321562       .       C       A       .       PASS    AA=C;DP=87      GT:GQ:DP        0|0:65:22       1|0:75:20       0|1:100:45
+3      32372095        rs3853713       G       A       .       PASS    AA=G;DP=114     GT:GQ:DP        0|0:65:22       1|0:86:21       0|1:100:76
+9      90412797        rs7864306       C       T       .       PASS    AA=C;DP=101     GT:GQ:DP        0|0:65:22       1|0:88:15       0|1:100:63
+1      106598615       .       T       G       .       PASS    AA=T;DP=94      GT:GQ:DP        0|0:65:22       1|0:89:17       0|1:100:43
+1      156532399       .       C       T       .       PASS    AA=C;DP=100     GT:GQ:DP        0|0:65:22       1|0:93:15       0|1:100:62
+1      244652946       .       G       A       .       PASS    AA=G;DP=106     GT:GQ:DP        0|0:65:22       1|0:96:24       0|1:100:59
+12     93105260        .       G       A       .       PASS    AA=G;DP=95      GT:GQ:DP        0|0:65:23       1|0:100:13      0|1:100:60
+2      196732899       .       A       G       .       PASS    AA=A;DP=92      GT:GQ:DP        0|0:65:23       1|0:100:16      0|1:100:53
+5      94978608        .       A       G       .       PASS    AA=A;DP=116     GT:GQ:DP        0|0:65:23       1|0:100:19      0|1:100:75
+11     34115284        .       T       C       .       PASS    AA=T;DP=130     GT:GQ:DP        0|0:65:23       1|0:100:21      0|1:100:85
+1      230650684       rs4649374       T       C       .       PASS    AA=T;DP=102;HM2;HM3     GT:GQ:DP        0|0:65:23       1|0:100:24      0|1:100:55
+2      195176214       .       A       T       .       PASS    AA=A;DP=129     GT:GQ:DP        0|0:65:23       1|0:100:25      0|1:100:82
+8      111769824       .       G       A       .       PASS    AA=G;DP=116     GT:GQ:DP        0|0:65:23       1|0:100:26      0|1:100:68
+7      53237168        .       G       A       .       PASS    AA=.;DP=96      GT:GQ:DP        0|0:65:23       1|0:100:32      0|1:100:28
+5      55703043        rs12517312      C       T       .       PASS    AA=C;DP=108     GT:GQ:DP        0|0:65:23       1|0:41:21       0|1:100:67
+17     75786923        .       C       T       .       PASS    AA=C;DP=109     GT:GQ:DP        0|0:65:23       1|0:63:12       0|1:100:74
+3      140747742       rs211586        T       C       .       PASS    AA=T;DP=104     GT:GQ:DP        0|0:65:23       1|0:87:12       0|1:100:71
+5      28094572        .       G       A       .       PASS    AA=G;DP=77      GT:GQ:DP        0|0:65:23       1|0:92:16       0|1:100:38
+6      142153022       rs9496142       G       A       .       PASS    AA=A;DP=119     GT:GQ:DP        0|0:65:23       1|0:93:17       0|1:100:80
+1      86445766        .       C       T       .       PASS    AA=C;DP=92      GT:GQ:DP        0|0:65:24       0|1:100:12      0|0:100:58
+9      136576292       .       G       A       .       PASS    AA=G;DP=127     GT:GQ:DP        0|0:65:24       0|1:100:15      0|0:100:60
+2      118545909       rs17047701      C       T       .       PASS    AA=C;DP=116     GT:GQ:DP        0|0:65:24       0|1:100:20      0|0:100:74
+9      111419280       rs16914290      C       G       .       PASS    AA=C;DP=136     GT:GQ:DP        0|0:65:24       0|1:100:36      0|0:100:77
+2      52020722        .       C       G       .       PASS    AA=C;DP=101     GT:GQ:DP        0|0:65:24       1|0:99:19       0|1:100:55
+2      114964854       rs7588484       C       T       .       PASS    AA=C;DP=108     GT:GQ:DP        0|0:65:25       1|0:35:16       0|1:100:69
+9      129256772       rs2244218       G       T       .       PASS    AA=G;DP=108     GT:GQ:DP        0|0:65:25       1|0:98:18       0|1:100:65
+6      82770343        .       A       C       .       PASS    AA=A;DP=87      GT:GQ:DP        0|0:65:26       0|1:100:17      0|0:59:43
+12     44113774        rs11183034      T       C       .       PASS    AA=T;DP=130     GT:GQ:DP        0|0:65:26       0|1:100:21      0|0:100:43
+19     2287836 .       G       T       .       PASS    AA=g;DP=137     GT:GQ:DP        0|0:65:26       0|1:100:23      0|0:100:90
+8      96423717        rs62524441      T       C       .       PASS    AA=C;DP=154     GT:GQ:DP        0|0:65:27       0|1:100:36      0|0:100:46
+21     44402567        rs7275572       T       C       .       PASS    AA=t;DP=128     GT:GQ:DP        0|0:65:27       1|0:100:25      0|1:100:79
+12     97569051        rs34144325      C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        0|0:65:27       1|0:53:15       0|1:100:38
+2      68773032        rs58122360      G       A       .       PASS    AA=G;DP=93      GT:GQ:DP        0|0:65:27       1|0:96:16       0|1:100:49
+18     46551003        rs7359749       G       A       .       PASS    AA=A;DP=126     GT:GQ:DP        0|0:65:28       0|1:100:22      0|0:100:60
+6      166594061       rs6923838       C       G       .       PASS    AA=C;DP=106     GT:GQ:DP        0|0:65:28       1|0:100:17      0|1:100:48
+7      136129726       .       T       A       .       PASS    AA=T;DP=90      GT:GQ:DP        0|0:65:28       1|0:100:18      0|1:100:47
+14     67136242        rs7149859       G       T       .       PASS    AA=G;DP=121     GT:GQ:DP        0|0:65:28       1|1:52:21       0|1:100:73
+2      237045635       rs2873519       A       C       .       PASS    AA=A;DP=98      GT:GQ:DP        0|0:65:30       0|1:100:20      0|0:79:38
+2      5380736 rs1524479       T       C       .       PASS    AA=T;DP=118     GT:GQ:DP        0|0:65:31       1|0:100:20      0|1:100:69
+8      13301920        rs11997611      G       A       .       PASS    AA=G;DP=119     GT:GQ:DP        0|0:65:31       1|0:100:28      0|1:100:60
+7      47384599        .       C       A       .       PASS    AA=C;DP=111     GT:GQ:DP        0|0:65:32       1|0:80:18       0|1:100:65
+11     87085796        rs4356250       A       G       .       PASS    AA=G;DP=120     GT:GQ:DP        0|0:65:32       1|0:97:21       0|1:100:67
+18     1874329 rs2289322       G       T       .       PASS    AA=G;DP=131     GT:GQ:DP        0|0:65:32       1|1:52:19       0|1:100:79
+9      137812665       rs1556419       A       G       .       PASS    AA=A;DP=122     GT:GQ:DP        0|0:65:33       1|0:75:17       0|1:100:72
+8      101173890       .       A       C       .       PASS    AA=A;DP=134     GT:GQ:DP        0|0:65:36       0|1:100:17      0|0:100:38
+7      140861855       .       C       T       .       PASS    AA=C;DP=156     GT:GQ:DP        0|0:65:36       0|1:100:32      0|0:100:50
+7      158276568       rs11981604      T       C       .       PASS    AA=C;DP=107     GT:GQ:DP        0|0:65:37       1|0:100:17      0|1:100:51
+3      101977072       .       G       A       .       PASS    AA=G;DP=143     GT:GQ:DP        0|0:65:37       1|0:100:31      0|1:100:74
+8      30002225        rs10101559      C       A       .       PASS    AA=C;DP=137     GT:GQ:DP        0|0:65:37       1|1:55:20       0|1:100:76
+5      117309585       rs6595077       G       A       .       PASS    AA=G;DP=78      GT:GQ:DP        0|0:66:22       1|1:13:7        0|1:100:45
+13     75812221        rs1164434       T       C       .       PASS    AA=C;DP=104     GT:GQ:DP        0|0:66:22       1|1:19:18       0|1:100:65
+3      117174238       rs7642875       G       A       .       PASS    AA=A;DP=83      GT:GQ:DP        0|0:66:22       1|1:19:8        0|1:100:48
+8      2144121 .       C       A       .       PASS    AA=C;DP=92      GT:GQ:DP        0|0:66:22       1|1:22:10       0|1:100:47
+8      15791995        rs873194        A       T       .       PASS    AA=A;DP=100     GT:GQ:DP        0|0:66:22       1|1:26:17       0|1:100:59
+4      42913734        .       T       A       .       PASS    AA=T;DP=84      GT:GQ:DP        0|0:66:22       1|1:29:17       0|1:100:45
+3      191859482       rs6788050       A       G       .       PASS    AA=G;DP=107     GT:GQ:DP        0|0:66:22       1|1:29:17       0|1:100:68
+2      7528030 rs7564413       A       G       .       PASS    AA=G;DP=101     GT:GQ:DP        0|0:66:22       1|1:31:12       0|1:100:68
+4      117660996       rs2162133       G       A       .       PASS    AA=A;DP=89      GT:GQ:DP        0|0:66:22       1|1:31:13       0|1:100:55
+13     93282753        rs57307452      T       A       .       PASS    AA=T;DP=103     GT:GQ:DP        0|0:66:22       1|1:31:23       0|1:100:60
+20     3975401 rs6076591       C       A       .       PASS    AA=N;DP=122     GT:GQ:DP        0|0:66:22       1|1:36:20       0|1:100:80
+7      57540824        rs57100471      A       C       .       PASS    AA=a;DP=80      GT:GQ:DP        0|0:66:22       1|1:37:14       0|1:100:44
+7      145800706       rs9691838       T       C       .       PASS    AA=C;DP=92      GT:GQ:DP        0|0:66:22       1|1:40:15       0|1:100:55
+9      3772229 rs7027755       A       G       .       PASS    AA=A;DP=107     GT:GQ:DP        0|0:66:22       1|1:41:21       0|1:100:65
+3      159811318       rs13319269      T       A       .       PASS    AA=T;DP=106     GT:GQ:DP        0|0:66:22       1|1:43:16       0|1:100:65
+8      8866548 rs4841079       G       A       .       PASS    AA=A;DP=125     GT:GQ:DP        0|0:66:22       1|1:43:17       0|1:100:85
+6      62339770        .       A       T       .       PASS    AA=A;DP=94      GT:GQ:DP        0|0:66:22       1|1:43:18       0|1:100:54
+17     47372469        rs11079987      T       A       .       PASS    AA=A;DP=77      GT:GQ:DP        0|0:66:22       1|1:46:17       0|1:100:25
+11     103758071       rs7932246       G       T       .       PASS    AA=G;DP=111     GT:GQ:DP        0|0:66:22       1|1:46:17       0|1:100:72
+7      15883193        rs38211 T       C       .       PASS    AA=T;DP=122     GT:GQ:DP        0|0:66:22       1|1:49:19       0|1:100:80
+2      6290761 .       A       G       .       PASS    AA=A;DP=106     GT:GQ:DP        0|0:66:22       1|1:52:19       0|1:100:54
+5      99390345        rs7735213       A       G       .       PASS    AA=G;DP=104     GT:GQ:DP        0|0:66:22       1|1:52:19       0|1:100:66
+1      175588016       rs12757194      C       G       .       PASS    AA=G;DP=111;HM2 GT:GQ:DP        0|0:66:22       1|1:52:19       0|1:100:70
+5      129381553       .       C       T       .       PASS    AA=C;DP=113     GT:GQ:DP        0|0:66:22       1|1:52:19       0|1:100:73
+14     79704983        rs224997        T       A       .       PASS    AA=A;DP=114     GT:GQ:DP        0|0:66:22       1|1:52:21       0|1:100:59
+3      146235483       rs7653837       T       C       .       PASS    AA=T;DP=95      GT:GQ:DP        0|0:66:22       1|1:55:20       0|1:100:54
+18     32430035        rs17651514      G       A       .       PASS    AA=G;DP=121     GT:GQ:DP        0|0:66:22       1|1:55:20       0|1:100:78
+4      118210749       rs11938889      G       A       .       PASS    AA=G;DP=92      GT:GQ:DP        0|0:66:22       1|1:55:21       0|1:100:49
+2      42100307        rs59178213      C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        0|0:66:22       1|1:55:21       0|1:100:65
+4      64347990        rs11733990      T       C       .       PASS    AA=T;DP=134     GT:GQ:DP        0|0:66:22       1|1:57:29       0|1:100:85
+18     49666024        .       C       T       .       PASS    AA=C;DP=116     GT:GQ:DP        0|0:66:22       1|1:58:21       0|1:100:76
+2      54485107        rs6752816       C       T       .       PASS    AA=C;DP=133     GT:GQ:DP        0|0:66:22       1|1:58:21       0|1:100:87
+21     18981497        rs1041409       A       G       .       PASS    AA=G;DP=132     GT:GQ:DP        0|0:66:22       1|1:59:28       0|1:100:81
+2      108575303       rs2718715       T       C       .       PASS    AA=T;DP=113     GT:GQ:DP        0|0:66:22       1|1:61:23       0|1:100:68
+21     24196396        rs2828585       T       G       .       PASS    AA=G;DP=108     GT:GQ:DP        0|0:66:22       1|1:64:24       0|1:100:63
+20     53488072        rs212600        A       G       .       PASS    AA=G;DP=125     GT:GQ:DP        0|0:66:22       1|1:64:24       0|1:100:77
+2      181040165       rs1823789       C       T       .       PASS    AA=T;DP=125     GT:GQ:DP        0|0:66:22       1|1:67:24       0|1:100:81
+4      79499112        rs447200        T       C       .       PASS    AA=C;DP=110     GT:GQ:DP        0|0:66:22       1|1:70:25       0|1:100:57
+5      92102722        rs6556911       G       A       .       PASS    AA=A;DP=121     GT:GQ:DP        0|0:66:22       1|1:73:26       0|1:100:56
+18     24591193        rs356912        A       G       .       PASS    AA=G;DP=123     GT:GQ:DP        0|0:66:22       1|1:73:27       0|1:100:70
+10     122636556       rs7067547       T       C       .       PASS    AA=C;DP=129     GT:GQ:DP        0|0:66:22       1|1:85:31       0|1:100:78
+4      129180852       rs4834223       G       A       .       PASS    AA=a;DP=119     GT:GQ:DP        0|0:66:22       1|1:88:31       0|1:100:69
+13     72547368        rs4885063       A       T       .       PASS    AA=T;DP=129     GT:GQ:DP        0|0:66:22       1|1:91:32       0|1:100:75
+1      48293775        rs302688        G       C       .       PASS    AA=G;DP=93;HM2  GT:GQ:DP        0|0:66:22       1|1:9:10        0|1:100:59
+2      163753295       rs61531647      G       T       .       PASS    AA=G;DP=110     GT:GQ:DP        0|0:66:23       1|0:100:20      0|1:100:71
+5      65069492        rs1966567       C       T       .       PASS    AA=T;DP=103     GT:GQ:DP        0|0:66:23       1|1:13:20       0|1:100:49
+3      13336287        rs354478        C       T       .       PASS    AA=T;DP=94      GT:GQ:DP        0|0:66:23       1|1:16:11       0|1:100:59
+19     35265857        rs8105521       T       C       .       PASS    AA=T;DP=106     GT:GQ:DP        0|0:66:23       1|1:18:18       0|1:100:66
+15     61002704        rs6494367       T       C       .       PASS    AA=T;DP=113     GT:GQ:DP        0|0:66:23       1|1:37:15       0|1:100:75
+11     93274620        rs12806128      C       T       .       PASS    AA=C;DP=100     GT:GQ:DP        0|0:66:23       1|1:40:15       0|1:100:59
+3      172708739       rs7651813       G       A       .       PASS    AA=G;DP=103     GT:GQ:DP        0|0:66:23       1|1:46:17       0|1:100:63
+13     27395621        rs4581569       C       T       .       PASS    AA=C;DP=98      GT:GQ:DP        0|0:66:23       1|1:49:20       0|1:100:56
+2      4694964 rs747888        C       A       .       PASS    AA=C;DP=104     GT:GQ:DP        0|0:66:23       1|1:52:19       0|1:100:58
+5      179140879       .       T       G       .       PASS    AA=t;DP=126     GT:GQ:DP        0|0:66:23       1|1:55:20       0|1:100:83
+16     13795606        rs1894393       T       C       .       PASS    AA=C;DP=113     GT:GQ:DP        0|0:66:23       1|1:55:21       0|1:100:68
+20     59537363        rs6061600       G       A       .       PASS    AA=A;DP=115     GT:GQ:DP        0|0:66:23       1|1:64:24       0|1:100:70
+18     49565550        rs16957281      A       G       .       PASS    AA=C;DP=105     GT:GQ:DP        0|0:66:23       1|1:64:25       0|1:100:55
+20     62271584        rs575743        C       G       .       PASS    AA=c;DP=134     GT:GQ:DP        0|0:66:23       1|1:70:27       0|1:100:86
+14     87079104        rs174518        C       T       .       PASS    AA=C;DP=146     GT:GQ:DP        0|0:66:23       1|1:75:40       0|1:100:82
+6      117840666       rs3777980       G       T       .       PASS    AA=G;DP=124     GT:GQ:DP        0|0:66:23       1|1:79:28       0|1:100:69
+4      12901832        rs11733005      T       C       .       PASS    AA=C;DP=131     GT:GQ:DP        0|0:66:24       0|1:100:25      0|0:100:79
+9      139601767       rs2297005       G       A       .       PASS    AA=A;DP=90      GT:GQ:DP        0|0:66:24       1|0:63:12       0|1:100:55
+7      15224981        rs6977610       C       T       .       PASS    AA=c;DP=80      GT:GQ:DP        0|0:66:24       1|1:52:19       0|1:100:37
+13     75641331        rs1105800       T       C       .       PASS    AA=C;DP=113     GT:GQ:DP        0|0:66:24       1|1:55:21       0|1:100:70
+3      1616389 rs9310485       A       G       .       PASS    AA=A;DP=92      GT:GQ:DP        0|0:66:24       1|1:9:15        0|1:100:57
+20     13190923        rs243905        A       G       .       PASS    AA=A;DP=96      GT:GQ:DP        0|0:66:25       1|0:100:26      0|1:100:32
+7      9307524 rs1529248       G       A       .       PASS    AA=-;DP=103     GT:GQ:DP        0|0:66:25       1|1:43:16       0|1:100:62
+1      220992744       rs41424447      A       T       .       PASS    AA=A;DP=143;HM3 GT:GQ:DP        0|0:66:26       0|1:100:30      0|0:100:43
+1      240639552       .       G       A       .       PASS    AA=G;DP=112     GT:GQ:DP        0|0:66:26       1|0:93:24       0|1:100:61
+5      53985317        rs7720197       G       A       .       PASS    AA=G;DP=122     GT:GQ:DP        0|0:66:27       0|1:100:20      0|0:100:80
+13     26126572        rs9512304       G       A       .       PASS    AA=G;DP=127     GT:GQ:DP        0|0:66:27       0|1:100:25      0|0:100:78
+14     105114414       .       C       T       .       PASS    AA=c;DP=152     GT:GQ:DP        0|0:66:27       1|0:100:29      0|1:100:44
+8      142310420       rs3824233       C       T       .       PASS    AA=C;DP=128     GT:GQ:DP        0|0:66:27       1|0:66:18       0|1:100:83
+5      86586269        .       A       G       .       PASS    AA=A;DP=108     GT:GQ:DP        0|0:66:28       1|0:100:21      0|1:100:58
+7      18784208        .       G       T       .       PASS    AA=G;DP=111     GT:GQ:DP        0|0:66:28       1|0:100:23      0|1:100:61
+22     48886827        rs9617072       T       C       .       PASS    AA=C;DP=91      GT:GQ:DP        0|0:66:28       1|0:60:22       0|1:100:41
+X      1687003 rs6644628       A       G       .       PASS    AA=.;DP=81      GT:GQ:DP        0|0:66:28       1|0:66:14       0|1:100:36
+5      164255708       .       A       G       .       PASS    AA=A;DP=92      GT:GQ:DP        0|0:66:28       1|0:83:14       0|1:100:41
+11     129180115       .       G       A       .       PASS    AA=G;DP=120     GT:GQ:DP        0|0:66:29       1|0:100:22      0|1:100:70
+22     36064398        rs5750423       T       G       .       PASS    AA=T;DP=104     GT:GQ:DP        0|0:66:29       1|0:81:17       0|1:100:58
+8      114262528       .       G       A       .       PASS    AA=g;DP=94      GT:GQ:DP        0|0:66:29       1|0:93:18       0|1:100:34
+14     28103081        rs176307        C       T       .       PASS    AA=C;DP=104     GT:GQ:DP        0|0:66:30       0|1:100:18      0|0:100:55
+13     102000752       rs6491691       C       T       .       PASS    AA=T;DP=87      GT:GQ:DP        0|0:66:30       0|1:100:19      0|0:93:31
+5      158192575       .       T       C       .       PASS    AA=T;DP=130     GT:GQ:DP        0|0:66:31       1|0:100:22      0|1:100:77
+2      41143492        rs35034537      A       C       .       PASS    AA=A;DP=105     GT:GQ:DP        0|0:66:32       0|1:100:15      0|0:100:59
+16     50470877        rs7204331       A       C       .       PASS    AA=T;DP=125     GT:GQ:DP        0|0:66:32       0|1:100:24      0|0:100:67
+1      172859434       rs10912821      G       A       .       PASS    AA=A;DP=147;HM2;HM3     GT:GQ:DP        0|0:66:32       0|1:100:29      0|0:100:90
+20     45879641        rs6018716       T       G       .       PASS    AA=G;DP=164     GT:GQ:DP        0|0:66:33       0|1:100:27      0|0:93:52
+9      89690009        .       C       G       .       PASS    AA=c;DP=117     GT:GQ:DP        0|0:66:33       1|0:100:15      0|1:100:67
+18     2418810 rs16943250      A       G       .       PASS    AA=A;DP=141     GT:GQ:DP        0|0:66:33       1|0:100:19      0|1:100:93
+15     23417937        .       G       T       .       PASS    AA=g;DP=132     GT:GQ:DP        0|0:66:33       1|0:100:20      0|1:100:76
+7      19767541        rs17141931      T       C       .       PASS    AA=C;DP=119     GT:GQ:DP        0|0:66:33       1|0:100:24      0|1:100:60
+17     20455513        rs17762379      A       G       .       PASS    AA=.;DP=138     GT:GQ:DP        0|0:66:33       1|0:100:24      0|1:100:79
+5      149439552       rs17110920      T       A       .       PASS    AA=T;DP=137     GT:GQ:DP        0|0:66:33       1|0:100:24      0|1:100:80
+7      136808278       .       G       A       .       PASS    AA=G;DP=125     GT:GQ:DP        0|0:66:33       1|0:100:25      0|1:100:59
+5      11834928        .       C       A       .       PASS    AA=C;DP=131     GT:GQ:DP        0|0:66:33       1|0:100:28      0|1:100:70
+16     24246764        rs28631331      A       C       .       PASS    AA=A;DP=152     GT:GQ:DP        0|0:66:33       1|0:100:33      0|1:100:43
+11     105524043       rs1939809       G       T       .       PASS    AA=G;DP=134     GT:GQ:DP        0|0:66:33       1|0:100:34      0|1:100:67
+6      76986114        rs1542661       G       A       .       PASS    AA=G;DP=146     GT:GQ:DP        0|0:66:33       1|0:100:39      0|1:100:72
+7      131547684       rs57496396      A       G       .       PASS    AA=A;DP=147     GT:GQ:DP        0|0:66:33       1|0:58:16       0|1:100:101
+5      35650260        rs12514518      A       G       .       PASS    AA=G;DP=94      GT:GQ:DP        0|0:66:33       1|0:73:24       0|1:100:26
+4      182448351       rs56163208      G       C       .       PASS    AA=G;DP=134     GT:GQ:DP        0|0:66:33       1|0:74:26       0|1:100:77
+12     90910768        .       G       A       .       PASS    AA=G;DP=120     GT:GQ:DP        0|0:66:33       1|0:82:18       0|1:100:70
+7      128823095       rs57831290      T       C       .       PASS    AA=t;DP=128     GT:GQ:DP        0|0:66:33       1|0:99:23       0|1:100:72
+18     71748658        rs28587459      A       C       .       PASS    AA=-;DP=122     GT:GQ:DP        0|0:66:33       1|1:19:24       0|1:100:68
+3      122864894       rs1169  C       T       .       PASS    AA=c;DP=147     GT:GQ:DP        0|0:66:34       1|0:94:25       0|1:100:88
+5      9999689 rs2914726       G       T       .       PASS    AA=G;DP=129     GT:GQ:DP        0|0:66:35       1|0:100:25      0|1:100:68
+2      38663245        rs7573095       T       C       .       PASS    AA=T;DP=77      GT:GQ:DP        0|0:67:22       1|0:72:9        0|1:100:41
+2      59854426        rs11898192      A       G       .       PASS    AA=A;DP=92      GT:GQ:DP        0|0:67:22       1|0:78:17       0|1:100:54
+12     118849479       .       A       G       .       PASS    AA=a;DP=80      GT:GQ:DP        0|0:67:22       1|1:3:9 0|1:100:49
+11     122651540       .       A       G       .       PASS    AA=a;DP=93      GT:GQ:DP        0|0:67:23       1|0:4:14        0|1:100:57
+9      8557838 rs7029767       A       G       .       PASS    AA=-;DP=112     GT:GQ:DP        0|0:67:26       1|0:100:15      0|1:100:66
+1      171056593       rs59424718      A       G       .       PASS    AA=A;DP=106     GT:GQ:DP        0|0:67:26       1|0:100:27      0|1:100:54
+8      23058362        .       G       A       .       PASS    AA=g;DP=102     GT:GQ:DP        0|0:67:27       0|1:100:17      0|0:100:49
+5      172722116       .       T       C       .       PASS    AA=T;DP=107     GT:GQ:DP        0|0:67:27       0|1:100:22      0|0:100:55
+17     24489474        rs57953044      G       A       .       PASS    AA=G;DP=101     GT:GQ:DP        0|0:67:27       1|0:100:15      0|1:100:56
+21     42102648        rs11909982      G       A       .       PASS    AA=g;DP=86      GT:GQ:DP        0|0:67:27       1|0:67:11       0|1:88:49
+5      168915532       rs59426401      G       T       .       PASS    AA=G;DP=88      GT:GQ:DP        0|0:67:27       1|0:75:15       0|1:100:41
+1      57480676        rs6587766       C       T       .       PASS    AA=C;DP=109;HM2 GT:GQ:DP        0|0:67:27       1|1:73:27       0|1:100:56
+19     62871046        rs10403851      A       G       .       PASS    AA=a;DP=115     GT:GQ:DP        0|0:67:28       0|1:100:16      0|0:100:71
+13     105006991       rs61656083      C       T       .       PASS    AA=C;DP=107     GT:GQ:DP        0|0:67:28       0|1:100:20      0|0:100:58
+11     90053301        rs35622960      G       C       .       PASS    AA=G;DP=114     GT:GQ:DP        0|0:67:28       0|1:100:20      0|0:100:64
+16     47942018        .       C       T       .       PASS    AA=C;DP=133     GT:GQ:DP        0|0:67:28       0|1:100:20      0|0:100:88
+3      178899082       rs62283352      A       C       .       PASS    AA=A;DP=116     GT:GQ:DP        0|0:67:28       0|1:100:24      0|0:100:60
+6      64984848        .       C       T       .       PASS    AA=T;DP=109     GT:GQ:DP        0|0:67:28       0|1:100:26      0|0:100:55
+11     18229086        rs7108460       A       C       .       PASS    AA=C;DP=102     GT:GQ:DP        0|0:67:28       1|0:100:18      0|1:100:56
+6      74117696        .       T       C       .       PASS    AA=t;DP=103     GT:GQ:DP        0|0:67:28       1|1:40:15       0|1:100:61
+1      245685068       rs6672845       T       C       .       PASS    AA=t;DP=160;HM2 GT:GQ:DP        0|0:67:28       1|1:76:27       0|1:100:57
+6      156654387       .       C       T       .       PASS    AA=C;DP=98      GT:GQ:DP        0|0:67:29       0|1:100:22      0|0:100:48
+21     16535232        .       C       T       .       PASS    AA=C;DP=112     GT:GQ:DP        0|0:67:29       0|1:100:25      0|0:100:57
+1      119887720       rs1987612       T       C       .       PASS    AA=C;DP=137     GT:GQ:DP        0|0:67:29       0|1:100:27      0|0:100:83
+6      140178366       .       G       A       .       PASS    AA=G;DP=138     GT:GQ:DP        0|0:67:29       1|0:100:33      0|1:100:81
+4      70426018        rs11732968      G       A       .       PASS    AA=G;DP=100     GT:GQ:DP        0|0:67:30       1|1:25:10       0|1:100:57
+3      88670175        rs7432022       A       G       .       PASS    AA=A;DP=91      GT:GQ:DP        0|0:67:30       1|1:37:16       0|1:100:42
+5      161988833       rs312324        C       T       .       PASS    AA=C;DP=125     GT:GQ:DP        0|0:67:30       1|1:39:24       0|1:100:72
+1      222593338       .       T       A       .       PASS    AA=T;DP=163     GT:GQ:DP        0|0:67:30       1|1:76:28       0|1:100:60
+11     50210822        rs11245621      T       A       .       PASS    AA=t;DP=81      GT:GQ:DP        0|0:67:31       1|1:5:16        0|1:100:27
+4      83853999        rs28608069      T       C       .       PASS    AA=T;DP=141     GT:GQ:DP        0|0:67:31       1|1:70:25       0|1:100:87
+6      71758146        .       C       T       .       PASS    AA=C;DP=123     GT:GQ:DP        0|0:67:32       1|0:100:26      0|1:100:67
+16     80183246        .       A       G       .       PASS    AA=a;DP=119     GT:GQ:DP        0|0:67:33       1|0:79:19       0|1:100:68
+6      11588662        rs11751931      T       G       .       PASS    AA=G;DP=150     GT:GQ:DP        0|0:67:33       1|1:52:19       0|1:100:96
+1      59695597        rs57335239      A       G       .       PASS    AA=G;DP=92      GT:GQ:DP        0|0:67:34       1|1:12:16       0|1:100:42
+19     54736140        .       T       C       .       PASS    AA=C;DP=91      GT:GQ:DP        0|0:67:34       1|1:25:15       0|1:100:33
+12     48666213        rs55802497      T       C       .       PASS    AA=C;DP=132     GT:GQ:DP        0|0:67:34       1|1:40:16       0|1:100:81
+10     49921099        rs2943253       A       G       .       PASS    AA=A;DP=115     GT:GQ:DP        0|0:67:34       1|1:49:18       0|1:100:62
+1      239199928       .       T       C       .       PASS    AA=C;DP=135     GT:GQ:DP        0|0:67:34       1|1:73:26       0|1:100:77
+1      111009846       rs2821546       T       A       .       PASS    AA=T;DP=138     GT:GQ:DP        0|0:67:34       1|1:82:29       0|1:100:76
+7      53361435        rs34949558      A       G       .       PASS    AA=A;DP=88      GT:GQ:DP        0|0:68:21       0|1:100:13      0|0:100:51
+6      87765865        rs6936751       T       C       .       PASS    AA=C;DP=91      GT:GQ:DP        0|0:68:21       0|1:100:13      0|0:100:59
+12     75780218        .       G       A       .       PASS    AA=G;DP=92      GT:GQ:DP        0|0:68:21       0|1:100:14      0|0:100:57
+11     134062772       rs7930501       G       A       .       PASS    AA=G;DP=119     GT:GQ:DP        0|0:68:21       0|1:100:15      0|0:100:39
+14     57575079        .       T       C       .       PASS    AA=T;DP=77      GT:GQ:DP        0|0:68:21       0|1:100:15      0|0:100:42
+7      12351189        rs10259100      G       A       .       PASS    AA=G;DP=80      GT:GQ:DP        0|0:68:21       0|1:100:15      0|0:100:43
+8      126083719       .       G       A       .       PASS    AA=G;DP=82      GT:GQ:DP        0|0:68:21       0|1:100:15      0|0:100:47
+10     9709079 .       C       T       .       PASS    AA=C;DP=103     GT:GQ:DP        0|0:68:21       0|1:100:15      0|0:100:59
+4      132546919       rs10019873      G       T       .       PASS    AA=G;DP=96      GT:GQ:DP        0|0:68:21       0|1:100:15      0|0:100:61
+13     43217574        rs7327966       G       T       .       PASS    AA=T;DP=103     GT:GQ:DP        0|0:68:21       0|1:100:15      0|0:100:66
+4      190044574       .       A       G       .       PASS    AA=A;DP=87      GT:GQ:DP        0|0:68:21       0|1:100:16      0|0:100:48
+1      211344948       rs11120089      A       G       .       PASS    AA=G;DP=85;HM2  GT:GQ:DP        0|0:68:21       0|1:100:16      0|0:100:49
+10     7269689 .       C       T       .       PASS    AA=c;DP=91      GT:GQ:DP        0|0:68:21       0|1:100:16      0|0:100:54
+15     88914176        rs28475217      T       C       .       PASS    AA=T;DP=94      GT:GQ:DP        0|0:68:21       0|1:100:16      0|0:100:56
+2      34897589        rs374556        G       A       .       PASS    AA=G;DP=121     GT:GQ:DP        0|0:68:21       0|1:100:16      0|0:100:86
+12     60067461        .       T       C       .       PASS    AA=T;DP=93      GT:GQ:DP        0|0:68:21       0|1:100:17      0|0:100:44
+6      124915134       rs7747665       G       A       .       PASS    AA=G;DP=129     GT:GQ:DP        0|0:68:21       0|1:100:17      0|0:100:44
+13     100083166       .       T       C       .       PASS    AA=T;DP=89      GT:GQ:DP        0|0:68:21       0|1:100:17      0|0:100:51
+5      54496353        rs2407932       A       G       .       PASS    AA=G;DP=91      GT:GQ:DP        0|0:68:21       0|1:100:17      0|0:100:54
+5      171360352       .       C       T       .       PASS    AA=C;DP=108     GT:GQ:DP        0|0:68:21       0|1:100:17      0|0:100:71
+18     44508935        rs9961657       C       G       .       PASS    AA=G;DP=110     GT:GQ:DP        0|0:68:21       0|1:100:17      0|0:100:72
+2      212614572       .       A       C       .       PASS    AA=A;DP=81      GT:GQ:DP        0|0:68:21       0|1:100:18      0|0:100:41
+2      19017592        rs16985740      C       A       .       PASS    AA=A;DP=124     GT:GQ:DP        0|0:68:21       0|1:100:18      0|0:100:44
+10     126990511       .       C       T       .       PASS    AA=C;DP=92      GT:GQ:DP        0|0:68:21       0|1:100:18      0|0:100:45
+15     33693599        .       G       A       .       PASS    AA=G;DP=91      GT:GQ:DP        0|0:68:21       0|1:100:18      0|0:100:52
+3      37829873        .       T       C       .       PASS    AA=T;DP=92      GT:GQ:DP        0|0:68:21       0|1:100:18      0|0:100:53
+4      6013690 .       C       A       .       PASS    AA=C;DP=108     GT:GQ:DP        0|0:68:21       0|1:100:18      0|0:100:67
+8      74422687        .       C       A       .       PASS    AA=C;DP=104     GT:GQ:DP        0|0:68:21       0|1:100:18      0|0:100:67
+15     65994359        .       C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        0|0:68:21       0|1:100:18      0|0:100:80
+10     3701122 rs10508258      G       T       .       PASS    AA=T;DP=124     GT:GQ:DP        0|0:68:21       0|1:100:18      0|0:100:85
+21     43492304        .       G       T       .       PASS    AA=G;DP=87      GT:GQ:DP        0|0:68:21       0|1:100:19      0|0:100:38
+4      122337026       .       G       A       .       PASS    AA=G;DP=85      GT:GQ:DP        0|0:68:21       0|1:100:19      0|0:100:45
+10     115216551       .       A       G       .       PASS    AA=A;DP=93      GT:GQ:DP        0|0:68:21       0|1:100:19      0|0:100:54
+20     42972643        .       G       A       .       PASS    AA=G;DP=99      GT:GQ:DP        0|0:68:21       0|1:100:19      0|0:100:56
+11     83191571        rs12801474      T       C       .       PASS    AA=t;DP=107     GT:GQ:DP        0|0:68:21       0|1:100:19      0|0:100:70
+9      139412171       .       G       A       .       PASS    AA=G;DP=87      GT:GQ:DP        0|0:68:21       0|1:100:19      0|0:89:34
+2      215266976       rs280628        T       C       .       PASS    AA=C;DP=88      GT:GQ:DP        0|0:68:21       0|1:100:20      0|0:100:34
+20     32822594        .       T       G       .       PASS    AA=T;DP=85      GT:GQ:DP        0|0:68:21       0|1:100:20      0|0:100:35
+12     15087849        rs2041904       C       T       .       PASS    AA=C;DP=97      GT:GQ:DP        0|0:68:21       0|1:100:20      0|0:100:50
+2      148685567       rs968877        T       A       .       PASS    AA=T;DP=92      GT:GQ:DP        0|0:68:21       0|1:100:20      0|0:100:51
+3      86682828        .       A       G       .       PASS    AA=G;DP=103     GT:GQ:DP        0|0:68:21       0|1:100:20      0|0:100:61
+14     79203554        .       T       C       .       PASS    AA=T;DP=103     GT:GQ:DP        0|0:68:21       0|1:100:20      0|0:100:62
+18     19695464        .       G       A       .       PASS    AA=G;DP=112     GT:GQ:DP        0|0:68:21       0|1:100:20      0|0:100:70
+9      13713686        .       A       C       .       PASS    AA=A;DP=118     GT:GQ:DP        0|0:68:21       0|1:100:20      0|0:99:33
+1      80102252        rs12565593      T       G       .       PASS    AA=T;DP=87      GT:GQ:DP        0|0:68:21       0|1:100:21      0|0:100:44
+7      37976588        rs2598080       C       T       .       PASS    AA=C;DP=140     GT:GQ:DP        0|0:68:21       0|1:100:21      0|0:100:52
+4      27735566        .       G       C       .       PASS    AA=G;DP=101     GT:GQ:DP        0|0:68:21       0|1:100:21      0|0:100:60
+5      8625599 rs58200219      A       G       .       PASS    AA=A;DP=119     GT:GQ:DP        0|0:68:21       0|1:100:21      0|0:100:64
+16     64130230        .       G       A       .       PASS    AA=G;DP=118     GT:GQ:DP        0|0:68:21       0|1:100:21      0|0:100:72
+8      40193342        rs7816927       A       G       .       PASS    AA=A;DP=114     GT:GQ:DP        0|0:68:21       0|1:100:21      0|0:100:73
+8      68387498        rs11774715      T       C       .       PASS    AA=T;DP=91      GT:GQ:DP        0|0:68:21       0|1:100:22      0|0:100:50
+3      106284531       .       T       C       .       PASS    AA=T;DP=93      GT:GQ:DP        0|0:68:21       0|1:100:22      0|0:100:51
+6      165362352       rs9355531       C       T       .       PASS    AA=T;DP=138     GT:GQ:DP        0|0:68:21       0|1:100:22      0|0:100:51
+1      237077886       rs12084192      A       T       .       PASS    AA=T;DP=105;HM2;HM3     GT:GQ:DP        0|0:68:21       0|1:100:22      0|0:100:63
+13     62559961        rs3119944       A       G       .       PASS    AA=a;DP=106     GT:GQ:DP        0|0:68:21       0|1:100:22      0|0:100:65
+3      63443647        rs6445352       A       G       .       PASS    AA=A;DP=106     GT:GQ:DP        0|0:68:21       0|1:100:22      0|0:100:66
+3      120836628       rs6797667       A       T       .       PASS    AA=A;DP=135     GT:GQ:DP        0|0:68:21       0|1:100:22      0|0:100:86
+1      109392956       rs28503409      G       T       .       PASS    AA=N;DP=143;HM3 GT:GQ:DP        0|0:68:21       0|1:100:23      0|0:100:40
+9      3378534 .       C       T       .       PASS    AA=C;DP=97      GT:GQ:DP        0|0:68:21       0|1:100:23      0|0:100:49
+11     90246254        .       A       G       .       PASS    AA=A;DP=113     GT:GQ:DP        0|0:68:21       0|1:100:23      0|0:100:57
+9      24073502        rs12380132      C       G       .       PASS    AA=C;DP=100     GT:GQ:DP        0|0:68:21       0|1:100:23      0|0:100:60
+4      164075063       rs4691879       C       T       .       PASS    AA=C;DP=109     GT:GQ:DP        0|0:68:21       0|1:100:23      0|0:100:65
+3      5234480 rs7621428       T       A       .       PASS    AA=A;DP=118     GT:GQ:DP        0|0:68:21       0|1:100:23      0|0:100:71
+14     103336417       rs4900597       C       T       .       PASS    AA=C;DP=121     GT:GQ:DP        0|0:68:21       0|1:100:23      0|0:100:80
+4      116824852       .       A       G       .       PASS    AA=A;DP=92      GT:GQ:DP        0|0:68:21       0|1:100:24      0|0:100:46
+2      159125768       .       C       T       .       PASS    AA=C;DP=105     GT:GQ:DP        0|0:68:21       0|1:100:24      0|0:100:59
+6      32350775        .       T       C       .       PASS    AA=t;DP=119     GT:GQ:DP        0|0:68:21       0|1:100:24      0|0:100:77
+13     38942916        rs9741239       C       T       .       PASS    AA=C;DP=124     GT:GQ:DP        0|0:68:21       0|1:100:24      0|0:100:78
+2      59996696        rs7595950       T       C       .       PASS    AA=T;DP=122     GT:GQ:DP        0|0:68:21       0|1:100:24      0|0:100:82
+7      67436749        .       T       C       .       PASS    AA=T;DP=130     GT:GQ:DP        0|0:68:21       0|1:100:25      0|0:100:36
+20     22707677        .       T       G       .       PASS    AA=T;DP=93      GT:GQ:DP        0|0:68:21       0|1:100:25      0|0:100:48
+X      103482331       .       A       T       .       PASS    AA=A;DP=149     GT:GQ:DP        0|0:68:21       0|1:100:25      0|0:100:49
+4      116241341       .       C       G       .       PASS    AA=C;DP=100     GT:GQ:DP        0|0:68:21       0|1:100:25      0|0:100:54
+13     68458791        rs9599374       C       T       .       PASS    AA=C;DP=106     GT:GQ:DP        0|0:68:21       0|1:100:25      0|0:100:56
+8      8447214 rs12550186      G       A       .       PASS    AA=G;DP=121     GT:GQ:DP        0|0:68:21       0|1:100:25      0|0:100:58
+8      54116642        .       A       G       .       PASS    AA=A;DP=107     GT:GQ:DP        0|0:68:21       0|1:100:25      0|0:100:59
+7      119423473       rs55979617      G       T       .       PASS    AA=G;DP=107     GT:GQ:DP        0|0:68:21       0|1:100:25      0|0:100:64
+9      90913617        .       C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        0|0:68:21       0|1:100:25      0|0:100:65
+8      25357164        .       G       A       .       PASS    AA=G;DP=113     GT:GQ:DP        0|0:68:21       0|1:100:25      0|0:100:68
+20     9729769 .       T       A       .       PASS    AA=T;DP=117     GT:GQ:DP        0|0:68:21       0|1:100:25      0|0:100:71
+6      165011144       rs972660        T       A       .       PASS    AA=T;DP=80      GT:GQ:DP        0|0:68:21       0|1:100:25      0|0:81:30
+1      57156453        .       A       G       .       PASS    AA=A;DP=94      GT:GQ:DP        0|0:68:21       0|1:100:26      0|0:100:45
+1      191670468       .       A       G       .       PASS    AA=A;DP=109     GT:GQ:DP        0|0:68:21       0|1:100:27      0|0:100:61
+9      71934575        .       A       G       .       PASS    AA=A;DP=108     GT:GQ:DP        0|0:68:21       0|1:100:27      0|0:100:61
+2      213444129       rs7588684       C       T       .       PASS    AA=C;DP=122     GT:GQ:DP        0|0:68:21       0|1:100:27      0|0:100:74
+2      205078441       .       T       C       .       PASS    AA=T;DP=117     GT:GQ:DP        0|0:68:21       0|1:100:28      0|0:100:68
+4      64799846        rs7691568       A       C       .       PASS    AA=A;DP=111     GT:GQ:DP        0|0:68:21       0|1:100:29      0|0:100:61
+1      67900718        rs12748843      A       C       .       PASS    AA=G;DP=126;HM2;HM3     GT:GQ:DP        0|0:68:21       0|1:100:29      0|0:100:76
+X      45750734        .       A       T       .       PASS    AA=-;DP=110     GT:GQ:DP        0|0:68:21       0|1:100:29      0|0:84:28
+6      80263749        rs9443676       T       C       .       PASS    AA=T;DP=115     GT:GQ:DP        0|0:68:21       0|1:100:30      0|0:100:66
+11     77674841        .       G       A       .       PASS    AA=G;DP=116     GT:GQ:DP        0|0:68:21       0|1:100:30      0|0:100:67
+13     52490545        .       C       G       .       PASS    AA=C;DP=120     GT:GQ:DP        0|0:68:21       0|1:100:30      0|0:100:72
+7      11223762        .       G       A       .       PASS    AA=G;DP=111     GT:GQ:DP        0|0:68:21       0|1:100:31      0|0:100:59
+1      161138279       .       T       C       .       PASS    AA=T;DP=119     GT:GQ:DP        0|0:68:21       0|1:100:31      0|0:100:66
+2      167812445       rs7581190       C       T       .       PASS    AA=C;DP=138     GT:GQ:DP        0|0:68:21       0|1:100:31      0|0:70:35
+X      152527235       rs4898362       T       C       .       PASS    AA=T;DP=145     GT:GQ:DP        0|0:68:21       0|1:100:32      0|0:100:55
+8      47839728        .       G       A       .       PASS    AA=g;DP=95      GT:GQ:DP        0|0:68:21       0|1:100:33      0|0:96:32
+8      61091764        rs2199931       G       A       .       PASS    AA=g;DP=78      GT:GQ:DP        0|0:68:21       0|1:100:7       0|0:100:45
+12     100794975       rs10860807      C       T       .       PASS    AA=C;DP=84      GT:GQ:DP        0|0:68:22       0|1:100:10      0|0:100:52
+5      12467877        .       T       C       .       PASS    AA=T;DP=101     GT:GQ:DP        0|0:68:22       0|1:100:11      0|0:100:65
+3      167042933       .       T       C       .       PASS    AA=T;DP=80      GT:GQ:DP        0|0:68:22       0|1:100:14      0|0:100:41
+12     68080745        .       A       T       .       PASS    AA=A;DP=83      GT:GQ:DP        0|0:68:22       0|1:100:14      0|0:100:45
+3      110790702       .       C       T       .       PASS    AA=C;DP=89      GT:GQ:DP        0|0:68:22       0|1:100:15      0|0:100:54
+8      21091557        .       G       A       .       PASS    AA=G;DP=110     GT:GQ:DP        0|0:68:22       0|1:100:16      0|0:100:73
+18     48479497        rs9959836       G       A       .       PASS    AA=G;DP=121     GT:GQ:DP        0|0:68:22       0|1:100:17      0|0:100:37
+19     39055744        rs28505308      G       A       .       PASS    AA=g;DP=101     GT:GQ:DP        0|0:68:22       0|1:100:17      0|0:100:63
+7      47019941        rs12702297      C       T       .       PASS    AA=C;DP=103     GT:GQ:DP        0|0:68:22       0|1:100:17      0|0:100:65
+14     83238479        rs60235675      T       C       .       PASS    AA=T;DP=95      GT:GQ:DP        0|0:68:22       0|1:100:18      0|0:100:50
+6      25265550        rs1900553       A       G       .       PASS    AA=G;DP=116     GT:GQ:DP        0|0:68:22       0|1:100:18      0|0:100:74
+3      184063965       .       T       C       .       PASS    AA=T;DP=98      GT:GQ:DP        0|0:68:22       0|1:100:19      0|0:100:57
+1      17171338        rs59768494      T       C       .       PASS    AA=T;DP=124     GT:GQ:DP        0|0:68:22       0|1:100:19      0|0:100:84
+X      149989740       rs58813363      A       G       .       PASS    AA=a;DP=123     GT:GQ:DP        0|0:68:22       0|1:100:20      0|0:100:53
+8      19319073        rs4921638       C       A       .       PASS    AA=C;DP=102     GT:GQ:DP        0|0:68:22       0|1:100:20      0|0:100:61
+16     47571699        .       G       A       .       PASS    AA=G;DP=107     GT:GQ:DP        0|0:68:22       0|1:100:20      0|0:100:67
+2      29238799        .       C       T       .       PASS    AA=C;DP=101     GT:GQ:DP        0|0:68:22       0|1:100:21      0|0:100:58
+3      84868990        .       A       G       .       PASS    AA=A;DP=118     GT:GQ:DP        0|0:68:22       0|1:100:21      0|0:100:74
+5      77537771        .       G       A       .       PASS    AA=G;DP=89      GT:GQ:DP        0|0:68:22       0|1:100:21      0|0:85:46
+6      147040402       rs6928002       G       C       .       PASS    AA=G;DP=112     GT:GQ:DP        0|0:68:22       0|1:100:22      0|0:100:47
+12     82047210        .       C       G       .       PASS    AA=C;DP=100     GT:GQ:DP        0|0:68:22       0|1:100:23      0|0:100:56
+17     65324244        rs12185256      A       G       .       PASS    AA=G;DP=119     GT:GQ:DP        0|0:68:22       0|1:100:23      0|0:100:75
+12     1391452 rs16928413      T       G       .       PASS    AA=T;DP=116     GT:GQ:DP        0|0:68:22       0|1:100:23      0|0:93:31
+7      88487822        rs12534396      C       T       .       PASS    AA=C;DP=112     GT:GQ:DP        0|0:68:22       0|1:100:24      0|0:100:66
+3      55094576        rs165387        A       G       .       PASS    AA=A;DP=133     GT:GQ:DP        0|0:68:22       0|1:100:24      0|0:100:83
+5      130351902       .       C       T       .       PASS    AA=C;DP=132     GT:GQ:DP        0|0:68:22       0|1:100:25      0|0:100:43
+11     31931360        .       G       C       .       PASS    AA=G;DP=115     GT:GQ:DP        0|0:68:22       0|1:100:26      0|0:100:63
+5      25728607        rs11960926      T       G       .       PASS    AA=T;DP=91      GT:GQ:DP        0|0:68:22       0|1:100:29      0|0:100:41
+7      110287201       rs764864        C       T       .       PASS    AA=C;DP=99      GT:GQ:DP        0|0:68:22       0|1:100:29      0|0:100:48
+9      78727170        rs57735615      T       A       .       PASS    AA=T;DP=129     GT:GQ:DP        0|0:68:22       0|1:100:31      0|0:100:63
+5      150653580       rs190309        T       C       .       PASS    AA=T;DP=104     GT:GQ:DP        0|0:68:22       1|0:100:11      0|1:100:72
+2      137540203       rs34594287      G       A       .       PASS    AA=g;DP=91      GT:GQ:DP        0|0:68:22       1|0:100:12      0|1:100:59
+11     93990326        rs600206        G       A       .       PASS    AA=G;DP=104     GT:GQ:DP        0|0:68:22       1|0:100:13      0|1:100:67
+16     54062022        rs1005913       T       G       .       PASS    AA=T;DP=101     GT:GQ:DP        0|0:68:22       1|0:100:13      0|1:100:67
+7      76831513        rs1181898       C       T       .       PASS    AA=C;DP=103     GT:GQ:DP        0|0:68:22       1|0:100:13      0|1:100:68
+6      56168389        rs61524954      A       G       .       PASS    AA=A;DP=83      GT:GQ:DP        0|0:68:22       1|0:100:14      0|1:100:47
+4      75764272        .       A       G       .       PASS    AA=A;DP=87      GT:GQ:DP        0|0:68:22       1|0:100:14      0|1:100:52
+5      24235469        rs10942029      A       G       .       PASS    AA=A;DP=96      GT:GQ:DP        0|0:68:22       1|0:100:14      0|1:100:58
+12     17802248        rs6486841       A       T       .       PASS    AA=T;DP=80      GT:GQ:DP        0|0:68:22       1|0:100:15      0|1:100:29
+8      37082106        .       G       A       .       PASS    AA=G;DP=75      GT:GQ:DP        0|0:68:22       1|0:100:15      0|1:100:36
+7      8942378 rs35768345      G       A       .       PASS    AA=A;DP=82      GT:GQ:DP        0|0:68:22       1|0:100:15      0|1:100:44
+18     30678812        .       C       T       .       PASS    AA=C;DP=91      GT:GQ:DP        0|0:68:22       1|0:100:15      0|1:100:53
+2      4621082 .       C       G       .       PASS    AA=C;DP=88      GT:GQ:DP        0|0:68:22       1|0:100:16      0|1:100:51
+3      162879306       rs12489710      T       A       .       PASS    AA=T;DP=101     GT:GQ:DP        0|0:68:22       1|0:100:16      0|1:100:65
+12     84847387        rs7960313       C       T       .       PASS    AA=C;DP=106     GT:GQ:DP        0|0:68:22       1|0:100:16      0|1:100:69
+9      2292747 rs12002333      A       G       .       PASS    AA=a;DP=125     GT:GQ:DP        0|0:68:22       1|0:100:16      0|1:100:88
+1      4375074 rs12027528      T       A       .       PASS    AA=T;DP=128     GT:GQ:DP        0|0:68:22       1|0:100:17      0|1:100:34
+1      68541212        rs11803180      G       C       .       PASS    AA=C;DP=112;HM2 GT:GQ:DP        0|0:68:22       1|0:100:17      0|1:100:34
+5      5670621 rs7448401       G       A       .       PASS    AA=A;DP=87      GT:GQ:DP        0|0:68:22       1|0:100:17      0|1:100:40
+5      163799588       rs4130719       G       A       .       PASS    AA=A;DP=90      GT:GQ:DP        0|0:68:22       1|0:100:17      0|1:100:51
+1      98292828        .       C       T       .       PASS    AA=C;DP=95      GT:GQ:DP        0|0:68:22       1|0:100:17      0|1:100:55
+11     105571480       rs4237621       A       G       .       PASS    AA=A;DP=119     GT:GQ:DP        0|0:68:22       1|0:100:18      0|1:100:41
+4      166987083       rs56653924      T       C       .       PASS    AA=T;DP=80      GT:GQ:DP        0|0:68:22       1|0:100:18      0|1:100:41
+3      154834329       rs1490547       C       T       .       PASS    AA=C;DP=86      GT:GQ:DP        0|0:68:22       1|0:100:18      0|1:100:48
+13     49561385        rs790938        A       G       .       PASS    AA=G;DP=92      GT:GQ:DP        0|0:68:22       1|0:100:18      0|1:100:50
+1      237637555       rs12123857      G       A       .       PASS    AA=A;DP=90;HM2;HM3      GT:GQ:DP        0|0:68:22       1|0:100:18      0|1:100:51
+5      123870047       .       A       G       .       PASS    AA=A;DP=91      GT:GQ:DP        0|0:68:22       1|0:100:18      0|1:100:51
+1      182158513       rs12567907      T       G       .       PASS    AA=T;DP=93;HM2  GT:GQ:DP        0|0:68:22       1|0:100:18      0|1:100:53
+9      91920601        rs56740812      T       C       .       PASS    AA=T;DP=99      GT:GQ:DP        0|0:68:22       1|0:100:18      0|1:100:54
+10     84339839        .       C       T       .       PASS    AA=C;DP=96      GT:GQ:DP        0|0:68:22       1|0:100:18      0|1:100:55
+2      116547026       .       C       T       .       PASS    AA=c;DP=96      GT:GQ:DP        0|0:68:22       1|0:100:18      0|1:100:56
+2      185769404       .       T       G       .       PASS    AA=T;DP=96      GT:GQ:DP        0|0:68:22       1|0:100:18      0|1:100:56
+2      211704871       rs56153748      C       G       .       PASS    AA=C;DP=99      GT:GQ:DP        0|0:68:22       1|0:100:18      0|1:100:59
+21     37953799        .       C       T       .       PASS    AA=C;DP=100     GT:GQ:DP        0|0:68:22       1|0:100:18      0|1:100:59
+2      212354130       rs7423708       T       G       .       PASS    AA=T;DP=103     GT:GQ:DP        0|0:68:22       1|0:100:18      0|1:100:66
+8      90111445        .       A       G       .       PASS    AA=A;DP=110     GT:GQ:DP        0|0:68:22       1|0:100:19      0|1:100:25
+21     22313148        rs1573452       A       T       .       PASS    AA=T;DP=81      GT:GQ:DP        0|0:68:22       1|0:100:19      0|1:100:42
+10     95793585        rs1418922       G       A       .       PASS    AA=G;DP=99      GT:GQ:DP        0|0:68:22       1|0:100:19      0|1:100:58
+3      171173279       .       G       A       .       PASS    AA=G;DP=98      GT:GQ:DP        0|0:68:22       1|0:100:19      0|1:100:59
+10     90664230        .       T       C       .       PASS    AA=T;DP=101     GT:GQ:DP        0|0:68:22       1|0:100:19      0|1:100:60
+18     51615765        rs1031830       G       A       .       PASS    AA=A;DP=101     GT:GQ:DP        0|0:68:22       1|0:100:19      0|1:100:61
+20     45261462        .       G       A       .       PASS    AA=G;DP=105     GT:GQ:DP        0|0:68:22       1|0:100:19      0|1:100:65
+20     7868432 rs2235237       T       A       .       PASS    AA=T;DP=107     GT:GQ:DP        0|0:68:22       1|0:100:19      0|1:100:66
+16     6167397 .       A       G       .       PASS    AA=A;DP=108     GT:GQ:DP        0|0:68:22       1|0:100:19      0|1:100:68
+4      60159498        .       G       A       .       PASS    AA=G;DP=111     GT:GQ:DP        0|0:68:22       1|0:100:20      0|1:100:29
+15     53117281        .       T       C       .       PASS    AA=T;DP=83      GT:GQ:DP        0|0:68:22       1|0:100:20      0|1:100:41
+4      53286690        .       G       T       .       PASS    AA=G;DP=83      GT:GQ:DP        0|0:68:22       1|0:100:20      0|1:100:42
+3      136691118       rs6802755       C       T       .       PASS    AA=C;DP=100     GT:GQ:DP        0|0:68:22       1|0:100:20      0|1:100:56
+5      87815229        .       G       T       .       PASS    AA=G;DP=103     GT:GQ:DP        0|0:68:22       1|0:100:20      0|1:100:59
+2      150587496       .       T       C       .       PASS    AA=T;DP=103     GT:GQ:DP        0|0:68:22       1|0:100:20      0|1:100:62
+5      98227323        rs162139        C       T       .       PASS    AA=C;DP=106     GT:GQ:DP        0|0:68:22       1|0:100:20      0|1:100:66
+12     69777088        rs60903622      T       C       .       PASS    AA=C;DP=111     GT:GQ:DP        0|0:68:22       1|0:100:20      0|1:100:68
+8      39470640        rs10958557      C       T       .       PASS    AA=c;DP=115     GT:GQ:DP        0|0:68:22       1|0:100:20      0|1:100:70
+11     86638339        rs548681        T       C       .       PASS    AA=C;DP=82      GT:GQ:DP        0|0:68:22       1|0:100:21      0|1:100:40
+16     61562749        rs30890 G       C       .       PASS    AA=G;DP=87      GT:GQ:DP        0|0:68:22       1|0:100:21      0|1:100:45
+6      120395349       .       A       T       .       PASS    AA=A;DP=93      GT:GQ:DP        0|0:68:22       1|0:100:21      0|1:100:49
+18     11312136        rs457626        T       C       .       PASS    AA=T;DP=94      GT:GQ:DP        0|0:68:22       1|0:100:21      0|1:100:50
+4      7974863 .       G       A       .       PASS    AA=g;DP=95      GT:GQ:DP        0|0:68:22       1|0:100:21      0|1:100:52
+9      11733119        rs10115108      C       T       .       PASS    AA=C;DP=97      GT:GQ:DP        0|0:68:22       1|0:100:22      0|1:100:49
+10     100032724       .       T       G       .       PASS    AA=T;DP=108     GT:GQ:DP        0|0:68:22       1|0:100:22      0|1:100:60
+5      24776584        rs2010785       T       C       .       PASS    AA=T;DP=107     GT:GQ:DP        0|0:68:22       1|0:100:22      0|1:100:64
+9      9061840 rs55661322      T       C       .       PASS    AA=T;DP=110     GT:GQ:DP        0|0:68:22       1|0:100:22      0|1:100:65
+14     97277302        rs28560089      C       A       .       PASS    AA=A;DP=121     GT:GQ:DP        0|0:68:22       1|0:100:22      0|1:100:76
+5      169923005       rs59266801      A       G       .       PASS    AA=A;DP=119     GT:GQ:DP        0|0:68:22       1|0:100:22      0|1:100:76
+1      225433535       rs6670934       A       T       .       PASS    AA=T;DP=124;HM2 GT:GQ:DP        0|0:68:22       1|0:100:23      0|1:100:32
+10     55790085        rs978675        C       T       .       PASS    AA=c;DP=94      GT:GQ:DP        0|0:68:22       1|0:100:23      0|1:100:51
+1      191829430       rs4393135       T       C       .       PASS    AA=C;DP=98;HM2  GT:GQ:DP        0|0:68:22       1|0:100:23      0|1:100:52
+9      121019775       rs60231714      G       A       .       PASS    AA=G;DP=104     GT:GQ:DP        0|0:68:22       1|0:100:23      0|1:100:60
+6      31964273        rs35875104      T       C       .       PASS    AA=T;DP=110     GT:GQ:DP        0|0:68:22       1|0:100:23      0|1:100:64
+3      39300618        rs2965057       T       G       .       PASS    AA=T;DP=107     GT:GQ:DP        0|0:68:22       1|0:100:23      0|1:100:65
+2      223759350       rs1470600       T       G       .       PASS    AA=G;DP=110     GT:GQ:DP        0|0:68:22       1|0:100:23      0|1:100:67
+5      35528922        .       T       C       .       PASS    AA=T;DP=121     GT:GQ:DP        0|0:68:22       1|0:100:23      0|1:100:77
+11     12274944        rs10831777      C       T       .       PASS    AA=C;DP=94      GT:GQ:DP        0|0:68:22       1|0:100:24      0|1:100:45
+18     6532365 rs34873630      C       T       .       PASS    AA=T;DP=98      GT:GQ:DP        0|0:68:22       1|0:100:24      0|1:100:52
+4      168490609       rs57844003      A       G       .       PASS    AA=A;DP=99      GT:GQ:DP        0|0:68:22       1|0:100:24      0|1:100:53
+18     74175307        rs59604567      G       A       .       PASS    AA=G;DP=106     GT:GQ:DP        0|0:68:22       1|0:100:24      0|1:100:61
+7      3453586 rs34888067      T       A       .       PASS    AA=t;DP=110     GT:GQ:DP        0|0:68:22       1|0:100:24      0|1:100:67
+12     38944038        rs10784462      C       G       .       PASS    AA=G;DP=123     GT:GQ:DP        0|0:68:22       1|0:100:24      0|1:100:77
+10     109199754       rs60675824      T       G       .       PASS    AA=T;DP=85      GT:GQ:DP        0|0:68:22       1|0:100:25      0|1:100:27
+11     35091757        rs2553814       G       T       .       PASS    AA=G;DP=130     GT:GQ:DP        0|0:68:22       1|0:100:25      0|1:100:29
+2      226276646       rs10498194      C       G       .       PASS    AA=C;DP=93      GT:GQ:DP        0|0:68:22       1|0:100:25      0|1:100:44
+20     59089049        rs61609763      T       G       .       PASS    AA=t;DP=96      GT:GQ:DP        0|0:68:22       1|0:100:25      0|1:100:49
+3      152322916       .       G       A       .       PASS    AA=G;DP=97      GT:GQ:DP        0|0:68:22       1|0:100:25      0|1:100:52
+3      162310533       rs13319969      A       C       .       PASS    AA=A;DP=106     GT:GQ:DP        0|0:68:22       1|0:100:25      0|1:100:59
+4      167569463       rs10213446      T       A       .       PASS    AA=T;DP=113     GT:GQ:DP        0|0:68:22       1|0:100:25      0|1:100:59
+6      141800571       .       T       C       .       PASS    AA=T;DP=111     GT:GQ:DP        0|0:68:22       1|0:100:25      0|1:100:64
+6      46412153        rs4714925       A       G       .       PASS    AA=A;DP=149     GT:GQ:DP        0|0:68:22       1|0:100:26      0|1:100:101
+11     40677485        .       C       T       .       PASS    AA=C;DP=92      GT:GQ:DP        0|0:68:22       1|0:100:26      0|1:100:43
+11     83462615        rs17146753      A       T       .       PASS    AA=A;DP=96      GT:GQ:DP        0|0:68:22       1|0:100:26      0|1:100:49
+18     69214683        rs11874217      A       G       .       PASS    AA=A;DP=100     GT:GQ:DP        0|0:68:22       1|0:100:26      0|1:100:52
+4      12105177        rs59311340      C       T       .       PASS    AA=T;DP=102     GT:GQ:DP        0|0:68:22       1|0:100:26      0|1:100:54
+5      125444620       .       T       C       .       PASS    AA=T;DP=104     GT:GQ:DP        0|0:68:22       1|0:100:26      0|1:100:55
+6      76183921        .       T       C       .       PASS    AA=T;DP=112     GT:GQ:DP        0|0:68:22       1|0:100:26      0|1:100:58
+19     46295202        rs1645701       G       A       .       PASS    AA=a;DP=117     GT:GQ:DP        0|0:68:22       1|0:100:26      0|1:100:67
+11     130234222       .       G       T       .       PASS    AA=G;DP=136     GT:GQ:DP        0|0:68:22       1|0:100:26      0|1:100:86
+7      34534465        .       G       T       .       PASS    AA=g;DP=90      GT:GQ:DP        0|0:68:22       1|0:100:27      0|1:100:28
+18     28118194        .       T       A       .       PASS    AA=T;DP=88      GT:GQ:DP        0|0:68:22       1|0:100:27      0|1:100:29
+10     87013561        rs10509516      T       C       .       PASS    AA=T;DP=129     GT:GQ:DP        0|0:68:22       1|0:100:27      0|1:100:39
+3      131907845       .       C       T       .       PASS    AA=C;DP=114     GT:GQ:DP        0|0:68:22       1|0:100:27      0|1:100:67
+5      50930068        .       C       A       .       PASS    AA=C;DP=120     GT:GQ:DP        0|0:68:22       1|0:100:27      0|1:100:72
+5      99520817        rs7726053       C       G       .       PASS    AA=G;DP=123     GT:GQ:DP        0|0:68:22       1|0:100:27      0|1:100:76
+3      163414606       rs13059793      G       A       .       PASS    AA=G;DP=126     GT:GQ:DP        0|0:68:22       1|0:100:27      0|1:100:81
+18     60600368        .       A       G       .       PASS    AA=A;DP=92      GT:GQ:DP        0|0:68:22       1|0:100:28      0|1:100:30
+3      155963157       .       A       G       .       PASS    AA=A;DP=100     GT:GQ:DP        0|0:68:22       1|0:100:28      0|1:100:52
+3      158747750       .       C       T       .       PASS    AA=C;DP=112     GT:GQ:DP        0|0:68:22       1|0:100:28      0|1:100:64
+21     18490391        rs2183557       C       T       .       PASS    AA=T;DP=121     GT:GQ:DP        0|0:68:22       1|0:100:28      0|1:100:72
+14     47514812        rs804332        G       A       .       PASS    AA=G;DP=104     GT:GQ:DP        0|0:68:22       1|0:100:29      0|1:100:51
+5      62055638        rs870260        C       A       .       PASS    AA=C;DP=128     GT:GQ:DP        0|0:68:22       1|0:100:29      0|1:100:75
+5      4983407 rs30452 C       T       .       PASS    AA=T;DP=139     GT:GQ:DP        0|0:68:22       1|0:100:29      0|1:100:84
+X      45013326        .       T       C       .       PASS    AA=T;DP=114     GT:GQ:DP        0|0:68:22       1|0:100:29      0|1:83:31
+18     29028705        rs8087964       G       C       .       PASS    AA=G;DP=113     GT:GQ:DP        0|0:68:22       1|0:100:30      0|1:100:62
+4      169110056       rs11929799      C       T       .       PASS    AA=C;DP=132     GT:GQ:DP        0|0:68:22       1|0:100:30      0|1:100:82
+8      69233914        rs28784981      G       A       .       PASS    AA=G;DP=108     GT:GQ:DP        0|0:68:22       1|0:100:32      0|1:100:54
+5      72452919        .       C       A       .       PASS    AA=C;DP=137     GT:GQ:DP        0|0:68:22       1|0:100:32      0|1:100:81
+1      181344420       rs10797839      T       C       .       PASS    AA=C;DP=126;HM2;HM3     GT:GQ:DP        0|0:68:22       1|0:100:33      0|1:100:71
+13     35328490        rs60698059      G       A       .       PASS    AA=G;DP=117     GT:GQ:DP        0|0:68:22       1|0:100:34      0|1:100:62
+3      2343759 rs12497920      G       A       .       PASS    AA=A;DP=111     GT:GQ:DP        0|0:68:22       1|0:100:35      0|1:100:54
+3      153640885       .       C       T       .       PASS    AA=C;DP=142     GT:GQ:DP        0|0:68:22       1|0:100:35      0|1:100:82
+2      75647225        .       A       T       .       PASS    AA=A;DP=141     GT:GQ:DP        0|0:68:22       1|0:100:38      0|1:100:29
+4      170575028       rs12644838      T       C       .       PASS    AA=T;DP=139     GT:GQ:DP        0|0:68:22       1|0:100:38      0|1:100:33
+20     60586274        rs6122006       G       A       .       PASS    AA=G;DP=73      GT:GQ:DP        0|0:68:22       1|0:11:10       0|1:100:35
+9      130941105       rs3118632       G       A       .       PASS    AA=G;DP=82      GT:GQ:DP        0|0:68:22       1|0:13:12       0|1:100:39
+20     4212100 rs6076651       G       C       .       PASS    AA=G;DP=122     GT:GQ:DP        0|0:68:22       1|0:25:21       0|1:100:80
+12     53831114        rs11171322      C       T       .       PASS    AA=T;DP=73      GT:GQ:DP        0|0:68:22       1|0:28:9        0|1:100:29
+4      161175939       .       G       T       .       PASS    AA=g;DP=74      GT:GQ:DP        0|0:68:22       1|0:35:8        0|1:100:36
+20     53196329        .       G       A       .       PASS    AA=G;DP=87      GT:GQ:DP        0|0:68:22       1|0:43:18       0|1:100:46
+9      138231281       rs2274114       G       A       .       PASS    AA=G;DP=78      GT:GQ:DP        0|0:68:22       1|0:45:9        0|1:100:35
+9      19472939        .       C       T       .       PASS    AA=C;DP=112     GT:GQ:DP        0|0:68:22       1|0:47:17       0|1:100:72
+14     45348002        .       G       A       .       PASS    AA=G;DP=111     GT:GQ:DP        0|0:68:22       1|0:49:11       0|1:100:34
+20     32924027        rs11697978      G       C       .       PASS    AA=G;DP=120     GT:GQ:DP        0|0:68:22       1|0:49:14       0|1:100:42
+3      127595817       rs2280677       G       A       .       PASS    AA=A;DP=121     GT:GQ:DP        0|0:68:22       1|0:49:18       0|1:100:77
+4      131629339       .       C       T       .       PASS    AA=T;DP=105     GT:GQ:DP        0|0:68:22       1|0:53:16       0|1:100:70
+7      30772188        .       C       A       .       PASS    AA=C;DP=109     GT:GQ:DP        0|0:68:22       1|0:54:19       0|1:100:58
+3      83694454        .       A       G       .       PASS    AA=A;DP=93      GT:GQ:DP        0|0:68:22       1|0:55:21       0|1:100:50
+13     102795623       rs9558056       T       C       .       PASS    AA=T;DP=91      GT:GQ:DP        0|0:68:22       1|0:57:24       0|1:100:47
+9      16543182        .       T       C       .       PASS    AA=t;DP=109     GT:GQ:DP        0|0:68:22       1|0:60:16       0|1:100:71
+17     73948938        rs2289750       G       A       .       PASS    AA=G;DP=78      GT:GQ:DP        0|0:68:22       1|0:62:11       0|1:100:40
+5      115710333       .       C       T       .       PASS    AA=T;DP=96      GT:GQ:DP        0|0:68:22       1|0:71:21       0|1:100:53
+3      61611196        rs7609954       G       T       .       PASS    AA=G;DP=110     GT:GQ:DP        0|0:68:22       1|0:73:17       0|1:100:53
+4      3783036 .       A       G       .       PASS    AA=a;DP=106     GT:GQ:DP        0|0:68:22       1|0:74:16       0|1:100:67
+4      156807336       rs6853933       A       G       .       PASS    AA=A;DP=79      GT:GQ:DP        0|0:68:22       1|0:78:14       0|1:100:43
+1      104606813       rs61670262      G       A       .       PASS    AA=g;DP=99      GT:GQ:DP        0|0:68:22       1|0:79:18       0|1:100:60
+12     100329575       rs7971587       A       T       .       PASS    AA=a;DP=99      GT:GQ:DP        0|0:68:22       1|0:80:20       0|1:100:55
+12     53561956        .       C       T       .       PASS    AA=c;DP=100     GT:GQ:DP        0|0:68:22       1|0:81:20       0|1:100:57
+4      10567013        .       C       G       .       PASS    AA=c;DP=109     GT:GQ:DP        0|0:68:22       1|0:83:17       0|1:100:69
+11     39221117        rs12286717      C       T       .       PASS    AA=T;DP=89      GT:GQ:DP        0|0:68:22       1|0:85:17       0|1:100:50
+8      79270476        .       G       C       .       PASS    AA=G;DP=90      GT:GQ:DP        0|0:68:22       1|0:87:12       0|1:100:50
+14     51368641        rs12323733      A       G       .       PASS    AA=G;DP=86      GT:GQ:DP        0|0:68:22       1|0:88:15       0|1:100:49
+9      14709102        rs60325671      A       G       .       PASS    AA=A;DP=97      GT:GQ:DP        0|0:68:22       1|0:89:13       0|1:100:61
+3      2389752 rs58453831      T       C       .       PASS    AA=T;DP=98      GT:GQ:DP        0|0:68:22       1|0:89:15       0|1:100:60
+7      145845919       rs801971        G       A       .       PASS    AA=G;DP=89      GT:GQ:DP        0|0:68:22       1|0:89:20       0|1:100:45
+1      58784992        rs1109896       A       C       .       PASS    AA=C;DP=83      GT:GQ:DP        0|0:68:22       1|0:92:12       0|1:100:40
+11     37853021        .       C       T       .       PASS    AA=C;DP=98      GT:GQ:DP        0|0:68:22       1|0:92:26       0|1:100:50
+9      28565100        rs58271251      G       A       .       PASS    AA=G;DP=86      GT:GQ:DP        0|0:68:22       1|0:93:14       0|1:100:54
+9      97006942        .       C       G       .       PASS    AA=G;DP=98      GT:GQ:DP        0|0:68:22       1|0:93:14       0|1:100:58
+18     65412575        .       C       A       .       PASS    AA=C;DP=66      GT:GQ:DP        0|0:68:22       1|0:94:13       0|1:100:22
+10     11614463        rs17150519      T       C       .       PASS    AA=T;DP=117     GT:GQ:DP        0|0:68:22       1|0:94:19       0|1:100:75
+8      52605857        .       C       T       .       PASS    AA=T;DP=106     GT:GQ:DP        0|0:68:22       1|0:94:24       0|1:100:58
+3      124952763       rs55857549      A       G       .       PASS    AA=A;DP=101     GT:GQ:DP        0|0:68:22       1|0:95:20       0|1:100:61
+11     9905308 rs60091309      C       G       .       PASS    AA=C;DP=95      GT:GQ:DP        0|0:68:22       1|0:96:17       0|1:100:43
+20     33252704        rs6142324       C       T       .       PASS    AA=c;DP=98      GT:GQ:DP        0|0:68:22       1|0:96:19       0|1:100:54
+2      158633002       .       T       C       .       PASS    AA=t;DP=91      GT:GQ:DP        0|0:68:22       1|0:97:20       0|1:100:35
+4      137033393       .       C       T       .       PASS    AA=C;DP=101     GT:GQ:DP        0|0:68:22       1|0:98:21       0|1:100:57
+10     28464183        rs4317882       G       A       .       PASS    AA=G;DP=126     GT:GQ:DP        0|0:68:22       1|0:99:18       0|1:100:88
+7      151046451       .       G       A       .       PASS    AA=G;DP=109     GT:GQ:DP        0|0:68:23       0|1:100:15      0|0:100:71
+17     42280459        rs7212221       C       T       .       PASS    AA=N;DP=128     GT:GQ:DP        0|0:68:23       0|1:100:18      0|0:100:87
+3      86185942        rs9830630       C       G       .       PASS    AA=G;DP=91      GT:GQ:DP        0|0:68:23       0|1:100:21      0|0:97:43
+7      12186375        .       C       A       .       PASS    AA=A;DP=109     GT:GQ:DP        0|0:68:23       0|1:100:22      0|0:100:63
+2      76824126        .       T       C       .       PASS    AA=T;DP=100     GT:GQ:DP        0|0:68:23       0|1:100:23      0|0:100:54
+6      135816857       rs17064532      C       T       .       PASS    AA=C;DP=99      GT:GQ:DP        0|0:68:23       0|1:100:23      0|0:100:54
+13     46897641        .       A       G       .       PASS    AA=G;DP=124     GT:GQ:DP        0|0:68:23       0|1:100:25      0|0:100:35
+6      148175124       rs2294803       G       A       .       PASS    AA=G;DP=123     GT:GQ:DP        0|0:68:23       0|1:100:27      0|0:100:75
+5      120865754       rs11747653      A       G       .       PASS    AA=A;DP=74      GT:GQ:DP        0|0:68:23       1|0:100:15      0|1:100:36
+X      56386455        rs6521412       A       G       .       PASS    AA=G;DP=148     GT:GQ:DP        0|0:68:23       1|0:100:15      0|1:100:55
+7      47760243        rs12666747      G       A       .       PASS    AA=A;DP=110     GT:GQ:DP        0|0:68:23       1|0:100:16      0|1:100:70
+6      119442413       .       A       T       .       PASS    AA=a;DP=98      GT:GQ:DP        0|0:68:23       1|0:100:17      0|1:100:46
+7      13318231        rs61152379      A       G       .       PASS    AA=A;DP=100     GT:GQ:DP        0|0:68:23       1|0:100:17      0|1:100:48
+12     113967528       .       A       C       .       PASS    AA=A;DP=114     GT:GQ:DP        0|0:68:23       1|0:100:17      0|1:100:70
+7      70085519        rs62458160      A       C       .       PASS    AA=A;DP=84      GT:GQ:DP        0|0:68:23       1|0:100:19      0|1:100:44
+6      96865596        .       G       A       .       PASS    AA=G;DP=93      GT:GQ:DP        0|0:68:23       1|0:100:19      0|1:100:53
+2      5788438 .       T       A       .       PASS    AA=T;DP=99      GT:GQ:DP        0|0:68:23       1|0:100:19      0|1:100:56
+4      158854133       rs10030833      G       A       .       PASS    AA=G;DP=106     GT:GQ:DP        0|0:68:23       1|0:100:19      0|1:100:64
+22     20870432        rs6001224       C       T       .       PASS    AA=c;DP=119     GT:GQ:DP        0|0:68:23       1|0:100:19      0|1:100:72
+9      3733480 .       T       C       .       PASS    AA=T;DP=89      GT:GQ:DP        0|0:68:23       1|0:100:20      0|1:100:47
+15     87623947        rs16942934      G       A       .       PASS    AA=G;DP=97      GT:GQ:DP        0|0:68:23       1|0:100:20      0|1:100:54
+17     61360373        rs7501480       C       T       .       PASS    AA=T;DP=108     GT:GQ:DP        0|0:68:23       1|0:100:20      0|1:100:64
+4      173651286       rs13150574      C       T       .       PASS    AA=c;DP=97      GT:GQ:DP        0|0:68:23       1|0:100:21      0|1:100:52
+16     13926625        rs59785825      T       C       .       PASS    AA=T;DP=97      GT:GQ:DP        0|0:68:23       1|0:100:21      0|1:100:55
+10     100080106       rs10883067      A       T       .       PASS    AA=T;DP=106     GT:GQ:DP        0|0:68:23       1|0:100:21      0|1:100:58
+9      82263519        .       T       C       .       PASS    AA=T;DP=103     GT:GQ:DP        0|0:68:23       1|0:100:21      0|1:100:58
+7      7493377 .       G       C       .       PASS    AA=G;DP=106     GT:GQ:DP        0|0:68:23       1|0:100:21      0|1:100:64
+16     57387876        .       T       C       .       PASS    AA=C;DP=90      GT:GQ:DP        0|0:68:23       1|0:100:22      0|1:100:28
+21     20776591        rs1786422       G       A       .       PASS    AA=G;DP=96      GT:GQ:DP        0|0:68:23       1|0:100:22      0|1:100:51
+13     100765888       .       A       T       .       PASS    AA=A;DP=102     GT:GQ:DP        0|0:68:23       1|0:100:22      0|1:100:56
+9      83762170        rs28589599      T       G       .       PASS    AA=G;DP=114     GT:GQ:DP        0|0:68:23       1|0:100:22      0|1:100:73
+7      102909540       .       C       T       .       PASS    AA=c;DP=120     GT:GQ:DP        0|0:68:23       1|0:100:22      0|1:100:75
+4      172968006       .       G       A       .       PASS    AA=G;DP=112     GT:GQ:DP        0|0:68:23       1|0:100:27      0|1:100:64
+8      27036589        .       G       T       .       PASS    AA=G;DP=129     GT:GQ:DP        0|0:68:23       1|0:100:27      0|1:100:79
+5      147026336       .       C       G       .       PASS    AA=C;DP=99      GT:GQ:DP        0|0:68:23       1|0:100:28      0|1:100:48
+8      102494126       rs1264477       C       T       .       PASS    AA=C;DP=136     GT:GQ:DP        0|0:68:23       1|0:100:29      0|1:100:88
+11     88571136        rs7929015       G       A       .       PASS    AA=A;DP=140     GT:GQ:DP        0|0:68:23       1|0:100:31      0|1:100:85
+10     83873710        rs1649939       A       G       .       PASS    AA=A;DP=116     GT:GQ:DP        0|0:68:23       1|0:100:32      0|1:100:60
+7      70382854        .       C       T       .       PASS    AA=c;DP=115     GT:GQ:DP        0|0:68:23       1|0:100:33      0|1:100:59
+5      166777514       .       T       C       .       PASS    AA=G;DP=126     GT:GQ:DP        0|0:68:23       1|0:100:36      0|1:100:68
+16     81046774        rs4782644       A       G       .       PASS    AA=G;DP=129     GT:GQ:DP        0|0:68:23       1|0:100:37      0|1:100:72
+6      63106222        rs11751968      G       T       .       PASS    AA=T;DP=120     GT:GQ:DP        0|0:68:23       1|0:52:24       0|1:100:73
+21     32289236        .       A       G       .       PASS    AA=A;DP=78      GT:GQ:DP        0|0:68:23       1|0:60:12       0|1:100:35
+10     65609964        rs60180175      T       A       .       PASS    AA=T;DP=99      GT:GQ:DP        0|0:68:23       1|0:61:12       0|1:100:67
+2      238135975       .       G       C       .       PASS    AA=G;DP=94      GT:GQ:DP        0|0:68:23       1|0:62:13       0|1:100:59
+1      92165725        rs9943278       G       A       .       PASS    AA=A;DP=100;HM2 GT:GQ:DP        0|0:68:23       1|0:62:19       0|1:100:60
+10     79812045        rs57178259      C       T       .       PASS    AA=c;DP=120     GT:GQ:DP        0|0:68:23       1|0:65:28       0|1:100:68
+14     84765905        rs2265506       G       A       .       PASS    AA=G;DP=104     GT:GQ:DP        0|0:68:23       1|0:67:26       0|1:100:49
+10     85237173        rs17101972      G       T       .       PASS    AA=G;DP=96      GT:GQ:DP        0|0:68:23       1|0:70:21       0|1:100:50
+2      14241453        rs11885233      T       C       .       PASS    AA=C;DP=107     GT:GQ:DP        0|0:68:23       1|0:79:22       0|1:100:59
+7      131278113       rs6955182       T       C       .       PASS    AA=T;DP=96      GT:GQ:DP        0|0:68:23       1|0:83:12       0|1:100:63
+8      93619879        rs59234765      C       G       .       PASS    AA=C;DP=115     GT:GQ:DP        0|0:68:23       1|0:84:23       0|1:100:69
+1      109266188       rs338477        A       G       .       PASS    AA=A;DP=89;HM2  GT:GQ:DP        0|0:68:23       1|0:90:18       0|1:100:46
+8      119397577       .       G       A       .       PASS    AA=G;DP=114     GT:GQ:DP        0|0:68:23       1|0:90:25       0|1:100:69
+12     78838955        rs35605181      C       T       .       PASS    AA=C;DP=102     GT:GQ:DP        0|0:68:23       1|0:91:15       0|1:100:65
+16     60839912        .       G       C       .       PASS    AA=G;DP=96      GT:GQ:DP        0|0:68:23       1|0:91:16       0|1:100:57
+6      32691893        .       A       T       .       PASS    AA=A;DP=99      GT:GQ:DP        0|0:68:23       1|0:97:21       0|1:100:44
+17     4423934 .       G       C       .       PASS    AA=C;DP=120     GT:GQ:DP        0|0:68:23       1|0:97:30       0|1:100:71
+2      221776213       .       G       A       .       PASS    AA=G;DP=102     GT:GQ:DP        0|0:68:24       0|1:100:20      0|0:100:58
+14     73667587        .       G       A       .       PASS    AA=G;DP=127     GT:GQ:DP        0|0:68:24       0|1:100:27      0|0:100:76
+1      184177993       .       T       A       .       PASS    AA=T;DP=96      GT:GQ:DP        0|0:68:24       1|0:100:20      0|1:100:51
+20     12642783        rs1930800       T       C       .       PASS    AA=T;DP=112     GT:GQ:DP        0|0:68:24       1|0:100:23      0|1:100:65
+1      14824297        rs16850615      T       C       .       PASS    AA=T;DP=126     GT:GQ:DP        0|0:68:24       1|0:100:23      0|1:100:82
+2      78331471        rs4633948       G       C       .       PASS    AA=G;DP=103     GT:GQ:DP        0|0:68:24       1|0:100:24      0|1:100:57
+11     116471244       .       A       G       .       PASS    AA=A;DP=108     GT:GQ:DP        0|0:68:24       1|0:100:27      0|1:100:58
+10     51235180        .       A       G       .       PASS    AA=A;DP=104     GT:GQ:DP        0|0:68:24       1|0:58:10       0|1:100:30
+17     61328291        rs16962970      A       G       .       PASS    AA=A;DP=111     GT:GQ:DP        0|0:68:24       1|0:69:22       0|1:100:67
+3      4122255 rs2322520       T       C       .       PASS    AA=T;DP=81      GT:GQ:DP        0|0:68:24       1|0:82:18       0|1:100:38
+13     70578522        rs943001        C       T       .       PASS    AA=C;DP=95      GT:GQ:DP        0|0:68:24       1|0:93:14       0|1:100:57
+2      241241451       rs6744241       A       G       .       PASS    AA=A;DP=127     GT:GQ:DP        0|0:68:24       1|0:96:18       0|1:100:45
+8      76639722        rs16939105      T       C       .       PASS    AA=T;DP=121     GT:GQ:DP        0|0:68:24       1|0:98:26       0|1:100:74
+17     12700541        .       C       T       .       PASS    AA=C;DP=121     GT:GQ:DP        0|0:68:26       0|1:100:21      0|0:100:72
+12     12757256        rs9804886       C       T       .       PASS    AA=C;DP=123     GT:GQ:DP        0|0:68:26       0|1:100:21      0|0:100:76
+19     9931204 .       A       C       .       PASS    AA=A;DP=113     GT:GQ:DP        0|0:68:26       1|0:68:24       0|1:100:65
+8      26401330        rs55751411      G       T       .       PASS    AA=G;DP=108     GT:GQ:DP        0|0:68:27       0|1:100:17      0|0:100:63
+13     92090968        rs11840931      A       T       .       PASS    AA=A;DP=117     GT:GQ:DP        0|0:68:27       0|1:100:20      0|0:100:73
+18     3348267 .       G       A       .       PASS    AA=G;DP=129     GT:GQ:DP        0|0:68:27       0|1:100:26      0|0:100:74
+3      3341054 .       G       A       .       PASS    AA=g;DP=137     GT:GQ:DP        0|0:68:27       1|0:94:28       0|1:100:37
+11     24824896        rs1486710       G       A       .       PASS    AA=a;DP=125     GT:GQ:DP        0|0:68:28       0|1:100:19      0|0:100:75
+8      26733433        rs58184110      C       A       .       PASS    AA=A;DP=98      GT:GQ:DP        0|0:68:28       1|0:64:19       0|1:100:55
+9      74376133        .       C       T       .       PASS    AA=c;DP=126     GT:GQ:DP        0|0:68:29       0|1:100:16      0|0:97:43
+1      71980671        rs12030035      G       T       .       PASS    AA=G;DP=105;HM2 GT:GQ:DP        0|0:68:29       1|0:100:22      0|1:100:55
+6      103234588       rs11962986      C       T       .       PASS    AA=C;DP=136     GT:GQ:DP        0|0:68:29       1|0:100:28      0|1:100:79
+22     45402841        rs55696533      C       T       .       PASS    AA=C;DP=101     GT:GQ:DP        0|0:68:29       1|1:21:14       0|1:100:58
+15     95515955        rs35759999      A       G       .       PASS    AA=A;DP=118     GT:GQ:DP        0|0:68:29       1|1:25:19       0|1:100:71
+8      114614963       rs16884805      G       A       .       PASS    AA=G;DP=106     GT:GQ:DP        0|0:68:30       1|0:100:22      0|1:100:52
+14     58879914        .       C       T       .       PASS    AA=C;DP=136     GT:GQ:DP        0|0:68:30       1|0:100:30      0|1:100:77
+6      148845403       .       T       C       .       PASS    AA=T;DP=114     GT:GQ:DP        0|0:68:30       1|0:77:24       0|1:100:59
+11     120036866       rs11217941      G       T       .       PASS    AA=G;DP=117     GT:GQ:DP        0|0:68:31       0|1:100:16      0|0:100:71
+12     12886426        rs7138406       C       T       .       PASS    AA=C;DP=123     GT:GQ:DP        0|0:68:31       0|1:100:18      0|0:100:72
+19     8003172 .       C       A       .       PASS    AA=C;DP=123     GT:GQ:DP        0|0:68:31       0|1:100:18      0|0:100:74
+5      90074834        rs10514334      T       C       .       PASS    AA=T;DP=111     GT:GQ:DP        0|0:68:31       0|1:100:34      0|0:100:45
+11     47556116        rs60620413      T       C       .       PASS    AA=T;DP=140     GT:GQ:DP        0|0:68:31       1|0:100:21      0|1:100:85
+7      31336127        rs62449171      G       A       .       PASS    AA=G;DP=94      GT:GQ:DP        0|0:68:32       1|0:100:21      0|1:100:30
+4      122112268       rs1450464       C       T       .       PASS    AA=C;DP=106     GT:GQ:DP        0|0:68:32       1|1:40:15       0|1:100:59
+1      199049527       .       A       G       .       PASS    AA=A;DP=119     GT:GQ:DP        0|0:68:34       0|1:100:19      0|0:100:67
+10     98799224        rs11816416      G       C       .       PASS    AA=G;DP=120     GT:GQ:DP        0|0:68:34       1|0:52:13       0|1:100:72
+22     49094101        .       G       C       .       PASS    AA=g;DP=96      GT:GQ:DP        0|0:68:34       1|1:3:9 0|1:100:54
+11     133492309       rs611170        G       C       .       PASS    AA=C;DP=129     GT:GQ:DP        0|0:68:36       1|0:73:23       0|1:100:69
+11     74665331        rs7952044       C       T       .       PASS    AA=C;DP=143     GT:GQ:DP        0|0:68:38       0|1:100:23      0|0:100:84
+21     17592317        .       G       A       .       PASS    AA=G;DP=119     GT:GQ:DP        0|0:69:23       1|0:75:19       0|1:100:78
+12     52953552        rs4759075       T       C       .       PASS    AA=T;DP=96      GT:GQ:DP        0|0:69:23       1|1:10:13       0|1:100:51
+5      152621800       rs3111205       A       C       .       PASS    AA=C;DP=81      GT:GQ:DP        0|0:69:23       1|1:11:14       0|1:100:44
+11     87848626        rs308784        A       C       .       PASS    AA=A;DP=97      GT:GQ:DP        0|0:69:23       1|1:19:19       0|1:100:54
+6      92605595        rs2501653       T       G       .       PASS    AA=T;DP=123     GT:GQ:DP        0|0:69:23       1|1:24:19       0|1:100:83
+4      109380656       rs6837862       T       A       .       PASS    AA=A;DP=97      GT:GQ:DP        0|0:69:23       1|1:25:21       0|1:100:45
+11     79395702        .       T       C       .       PASS    AA=T;DP=95      GT:GQ:DP        0|0:69:23       1|1:27:16       0|1:100:56
+13     22240760        rs10467397      T       C       .       PASS    AA=T;DP=75      GT:GQ:DP        0|0:69:23       1|1:29:15       0|1:100:29
+12     20058243        rs2254647       G       A       .       PASS    AA=A;DP=86      GT:GQ:DP        0|0:69:23       1|1:31:23       0|1:100:41
+4      72730574        rs4694103       A       C       .       PASS    AA=C;DP=117     GT:GQ:DP        0|0:69:23       1|1:36:18       0|1:100:78
+9      16492113        rs1927630       A       C       .       PASS    AA=C;DP=117     GT:GQ:DP        0|0:69:23       1|1:36:25       0|1:100:64
+3      16029839        .       T       G       .       PASS    AA=T;DP=107     GT:GQ:DP        0|0:69:23       1|1:37:14       0|1:100:28
+3      110134811       rs1470567       T       C       .       PASS    AA=N;DP=93      GT:GQ:DP        0|0:69:23       1|1:37:14       0|1:100:59
+2      226929082       rs7599527       T       C       .       PASS    AA=T;DP=99      GT:GQ:DP        0|0:69:23       1|1:37:16       0|1:100:58
+5      6180247 rs10073417      T       C       .       PASS    AA=T;DP=104     GT:GQ:DP        0|0:69:23       1|1:39:20       0|1:100:60
+9      132966208       rs353537        C       T       .       PASS    AA=C;DP=93      GT:GQ:DP        0|0:69:23       1|1:40:15       0|1:100:55
+8      80009332        .       T       C       .       PASS    AA=T;DP=106     GT:GQ:DP        0|0:69:23       1|1:40:16       0|1:100:66
+X      35595680        rs5927448       C       T       .       PASS    AA=C;DP=97      GT:GQ:DP        0|0:69:23       1|1:42:22       0|1:100:37
+4      39625897        rs13105733      G       A       .       PASS    AA=A;DP=129     GT:GQ:DP        0|0:69:23       1|1:43:16       0|1:100:50
+11     96807724        rs10791744      A       G       .       PASS    AA=G;DP=118     GT:GQ:DP        0|0:69:23       1|1:43:16       0|1:100:79
+8      97830122        rs10808352      G       C       .       PASS    AA=C;DP=79      GT:GQ:DP        0|0:69:23       1|1:43:17       0|1:100:39
+4      104315512       rs60151877      A       G       .       PASS    AA=A;DP=83      GT:GQ:DP        0|0:69:23       1|1:43:17       0|1:100:44
+8      135347307       rs4385492       C       G       .       PASS    AA=G;DP=100     GT:GQ:DP        0|0:69:23       1|1:43:17       0|1:100:60
+7      146341109       .       G       A       .       PASS    AA=G;DP=94      GT:GQ:DP        0|0:69:23       1|1:43:23       0|1:100:47
+9      31670286        .       G       T       .       PASS    AA=G;DP=107     GT:GQ:DP        0|0:69:23       1|1:43:24       0|1:100:57
+9      17880833        rs10733340      C       G       .       PASS    AA=G;DP=95      GT:GQ:DP        0|0:69:23       1|1:46:18       0|1:100:55
+1      75635114        rs1249813       C       A       .       PASS    AA=C;DP=122;HM2;HM3     GT:GQ:DP        0|0:69:23       1|1:49:18       0|1:100:79
+17     7192872 rs2292067       G       T       .       PASS    AA=.;DP=117     GT:GQ:DP        0|0:69:23       1|1:49:19       0|1:100:76
+9      30449711        rs12338110      A       C       .       PASS    AA=A;DP=127     GT:GQ:DP        0|0:69:23       1|1:50:26       0|1:100:59
+3      157298703       rs34769075      G       A       .       PASS    AA=A;DP=97      GT:GQ:DP        0|0:69:23       1|1:58:21       0|1:100:44
+7      99981674        .       C       A       .       PASS    AA=C;DP=107     GT:GQ:DP        0|0:69:23       1|1:58:22       0|1:100:63
+9      77468507        rs4409460       A       G       .       PASS    AA=A;DP=107     GT:GQ:DP        0|0:69:23       1|1:58:22       0|1:100:65
+9      10526959        rs2784608       A       T       .       PASS    AA=A;DP=110     GT:GQ:DP        0|0:69:23       1|1:58:22       0|1:100:67
+1      197143481       rs7540461       T       C       .       PASS    AA=T;DP=98;HM2  GT:GQ:DP        0|0:69:23       1|1:58:23       0|1:100:50
+9      28324137        rs7847504       G       A       .       PASS    AA=G;DP=106     GT:GQ:DP        0|0:69:23       1|1:61:22       0|1:100:61
+17     36639889        rs7221556       T       C       .       PASS    AA=t;DP=121     GT:GQ:DP        0|0:69:23       1|1:61:23       0|1:100:35
+21     43450877        rs9981887       T       C       .       PASS    AA=C;DP=112     GT:GQ:DP        0|0:69:23       1|1:61:23       0|1:100:67
+4      155275924       rs59969933      T       C       .       PASS    AA=C;DP=119     GT:GQ:DP        0|0:69:23       1|1:62:29       0|1:100:52
+16     77648998        rs2161726       G       T       .       PASS    AA=G;DP=99      GT:GQ:DP        0|0:69:23       1|1:64:23       0|1:100:54
+11     96490299        rs7952054       G       A       .       PASS    AA=A;DP=130     GT:GQ:DP        0|0:69:23       1|1:64:23       0|1:100:68
+8      35976935        .       G       A       .       PASS    AA=G;DP=126     GT:GQ:DP        0|0:69:23       1|1:64:24       0|1:100:78
+5      158445390       rs9637861       C       G       .       PASS    AA=G;DP=96      GT:GQ:DP        0|0:69:23       1|1:64:25       0|1:100:50
+8      18258345        rs13264304      C       G       .       PASS    AA=.;DP=139     GT:GQ:DP        0|0:69:23       1|1:64:25       0|1:100:87
+1      178909718       rs10914065      T       G       .       PASS    AA=G;DP=117;HM2 GT:GQ:DP        0|0:69:23       1|1:67:24       0|1:100:70
+2      178554479       rs2695746       C       T       .       PASS    AA=C;DP=118     GT:GQ:DP        0|0:69:23       1|1:67:24       0|1:100:71
+2      53274474        .       C       T       .       PASS    AA=c;DP=100     GT:GQ:DP        0|0:69:23       1|1:67:25       0|1:100:47
+5      59695816        rs56921917      G       A       .       PASS    AA=G;DP=91      GT:GQ:DP        0|0:69:23       1|1:70:25       0|1:100:42
+1      42838266        rs11210678      G       A       .       PASS    AA=A;DP=128;HM2 GT:GQ:DP        0|0:69:23       1|1:73:32       0|1:100:73
+X      82453056        rs7879977       A       G       .       PASS    AA=G;DP=139     GT:GQ:DP        0|0:69:23       1|1:73:35       0|1:100:53
+15     54504658        rs4774857       T       C       .       PASS    AA=T;DP=106     GT:GQ:DP        0|0:69:23       1|1:8:12        0|1:100:70
+7      154033792       rs1488926       C       T       .       PASS    AA=C;DP=145     GT:GQ:DP        0|0:69:23       1|1:92:38       0|1:100:84
+6      39408262        rs56979582      A       C       .       PASS    AA=A;DP=123     GT:GQ:DP        0|0:69:24       0|1:100:21      0|0:100:79
+17     36275523        rs55677643      T       C       .       PASS    AA=T;DP=73      GT:GQ:DP        0|0:69:24       1|1:16:15       0|1:100:33
+1      186256340       rs6702718       T       G       .       PASS    AA=T;DP=103     GT:GQ:DP        0|0:69:24       1|1:21:24       0|1:100:59
+4      15989201        rs28650994      C       G       .       PASS    AA=C;DP=91      GT:GQ:DP        0|0:69:24       1|1:28:12       0|1:100:43
+14     80865893        rs58725279      T       G       .       PASS    AA=T;DP=124     GT:GQ:DP        0|0:69:24       1|1:34:13       0|1:100:87
+9      85002800        rs7041473       A       C       .       PASS    AA=A;DP=109     GT:GQ:DP        0|0:69:24       1|1:47:25       0|1:100:57
+1      186329302       rs1407709       T       C       .       PASS    AA=t;DP=112;HM2;HM3     GT:GQ:DP        0|0:69:24       1|1:49:20       0|1:100:70
+12     68850132        rs7315956       A       G       .       PASS    AA=G;DP=113     GT:GQ:DP        0|0:69:24       1|1:52:19       0|1:100:74
+14     49271983        rs6572600       G       A       .       PASS    AA=A;DP=93      GT:GQ:DP        0|0:69:24       1|1:52:20       0|1:100:49
+2      71372045        rs6546681       C       G       .       PASS    AA=C;DP=96      GT:GQ:DP        0|0:69:24       1|1:52:20       0|1:100:54
+8      134621813       rs58914007      C       T       .       PASS    AA=T;DP=109     GT:GQ:DP        0|0:69:24       1|1:55:20       0|1:100:65
+13     34085731        rs55902196      T       G       .       PASS    AA=T;DP=119     GT:GQ:DP        0|0:69:24       1|1:55:28       0|1:100:68
+10     110108177       rs10884627      T       G       .       PASS    AA=T;DP=117     GT:GQ:DP        0|0:69:24       1|1:58:21       0|1:100:77
+13     45973845        rs494594        T       A       .       PASS    AA=-;DP=80      GT:GQ:DP        0|0:69:24       1|1:61:22       0|1:100:23
+7      35560488        rs10270692      G       A       .       PASS    AA=G;DP=119     GT:GQ:DP        0|0:69:24       1|1:76:28       0|1:100:66
+21     19039253        rs8126906       C       T       .       PASS    AA=C;DP=118     GT:GQ:DP        0|0:69:24       1|1:88:31       0|1:100:56
+12     119759057       rs11065288      G       C       .       PASS    AA=g;DP=126     GT:GQ:DP        0|0:69:24       1|1:88:33       0|1:100:71
+4      70453239        rs6829148       T       C       .       PASS    AA=C;DP=131     GT:GQ:DP        0|0:69:24       1|1:91:33       0|1:100:32
+12     73054461        rs7961321       T       G       .       PASS    AA=G;DP=103     GT:GQ:DP        0|0:69:25       1|1:17:18       0|1:100:60
+3      100280904       rs56812935      T       G       .       PASS    AA=G;DP=99      GT:GQ:DP        0|0:69:25       1|1:31:23       0|1:100:38
+17     57585747        .       G       A       .       PASS    AA=G;DP=93      GT:GQ:DP        0|0:69:25       1|1:34:13       0|1:100:56
+4      70437659        rs4694758       T       C       .       PASS    AA=N;DP=125     GT:GQ:DP        0|0:69:25       1|1:52:21       0|1:100:77
+7      125111813       .       G       A       .       PASS    AA=G;DP=93      GT:GQ:DP        0|0:69:25       1|1:55:20       0|1:100:48
+10     12551735        rs2768411       A       G       .       PASS    AA=A;DP=131     GT:GQ:DP        0|0:69:25       1|1:70:25       0|1:100:83
+1      207478127       .       C       T       .       PASS    AA=.;DP=99      GT:GQ:DP        0|0:69:26       0|1:100:20      0|0:100:53
+9      95041220        rs61261989      C       T       .       PASS    AA=C;DP=82      GT:GQ:DP        0|0:69:26       1|0:75:13       0|1:100:30
+5      119663774       rs10900739      G       T       .       PASS    AA=G;DP=94      GT:GQ:DP        0|0:69:27       0|1:100:12      0|0:100:55
+4      12741476        .       G       T       .       PASS    AA=G;DP=107     GT:GQ:DP        0|0:69:27       0|1:100:17      0|0:100:62
+6      78173156        .       C       T       .       PASS    AA=C;DP=108     GT:GQ:DP        0|0:69:27       0|1:100:17      0|0:100:65
+13     102736876       rs7994848       C       G       .       PASS    AA=C;DP=102     GT:GQ:DP        0|0:69:27       1|0:69:15       0|1:100:60
+6      13512040        .       G       C       .       PASS    AA=G;DP=101     GT:GQ:DP        0|0:69:27       1|1:32:18       0|1:100:53
+2      143665190       rs62171677      A       G       .       PASS    AA=G;DP=125     GT:GQ:DP        0|0:69:28       0|1:100:25      0|0:100:72
+13     72227087        rs8002668       G       A       .       PASS    AA=A;DP=125     GT:GQ:DP        0|0:69:28       0|1:100:28      0|0:100:68
+4      123678154       .       T       C       .       PASS    AA=T;DP=143     GT:GQ:DP        0|0:69:28       0|1:100:28      0|0:100:82
+10     114316939       rs61623445      C       T       .       PASS    AA=C;DP=100     GT:GQ:DP        0|0:69:28       1|0:100:23      0|1:100:38
+9      71631211        rs1330239       C       T       .       PASS    AA=C;DP=135     GT:GQ:DP        0|0:69:28       1|0:100:33      0|1:100:76
+6      12627418        rs6458320       A       G       .       PASS    AA=A;DP=118     GT:GQ:DP        0|0:69:29       0|1:100:20      0|0:100:68
+8      81249998        .       G       A       .       PASS    AA=G;DP=145     GT:GQ:DP        0|0:69:29       0|1:100:23      0|0:100:50
+1      236123297       rs10399624      T       A       .       PASS    AA=T;DP=133;HM2;HM3     GT:GQ:DP        0|0:69:29       0|1:100:25      0|0:100:80
+8      20949387        rs11204155      A       T       .       PASS    AA=A;DP=144     GT:GQ:DP        0|0:69:29       0|1:100:26      0|0:100:87
+7      5089540 rs7808294       G       T       .       PASS    AA=A;DP=116     GT:GQ:DP        0|0:69:29       1|0:100:24      0|1:100:63
+13     99180160        .       T       C       .       PASS    AA=T;DP=105     GT:GQ:DP        0|0:69:30       0|1:100:10      0|0:100:66
+22     43131186        .       C       A       .       PASS    AA=C;DP=114     GT:GQ:DP        0|0:69:30       0|1:100:16      0|0:100:69
+5      100978801       rs13357182      A       C       .       PASS    AA=A;DP=137     GT:GQ:DP        0|0:69:30       0|1:100:29      0|0:100:79
+19     21478066        .       T       C       .       PASS    AA=T;DP=80      GT:GQ:DP        0|0:69:30       1|0:100:17      0|1:91:32
+4      139596373       .       A       G       .       PASS    AA=A;DP=137     GT:GQ:DP        0|0:69:30       1|0:100:22      0|1:100:39
+2      43839444        rs7570252       C       A       .       PASS    AA=C;DP=147     GT:GQ:DP        0|0:69:30       1|0:100:26      0|1:100:38
+2      155284407       .       T       A       .       PASS    AA=T;DP=138     GT:GQ:DP        0|0:69:30       1|0:100:29      0|1:100:75
+1      104850652       .       G       A       .       PASS    AA=N;DP=137     GT:GQ:DP        0|0:69:30       1|0:100:34      0|1:100:74
+16     16078572        rs45482494      T       C       .       PASS    AA=T;DP=130     GT:GQ:DP        0|0:69:31       1|0:83:21       0|1:100:79
+12     110218261       .       G       T       .       PASS    AA=g;DP=117     GT:GQ:DP        0|0:69:31       1|0:86:10       0|1:100:76
+19     45961073        .       T       G       .       PASS    AA=T;DP=122     GT:GQ:DP        0|0:69:33       0|1:100:14      0|0:100:75
+17     15249546        rs4792599       C       T       .       PASS    AA=C;DP=124     GT:GQ:DP        0|0:69:33       0|1:100:17      0|0:100:73
+9      2219388 rs10811676      C       T       .       PASS    AA=C;DP=138     GT:GQ:DP        0|0:69:33       0|1:100:17      0|0:100:90
+5      175943394       rs749186        C       G       .       PASS    AA=C;DP=140     GT:GQ:DP        0|0:69:33       0|1:100:18      0|0:100:87
+2      167118738       rs13387004      C       T       .       PASS    AA=T;DP=124     GT:GQ:DP        0|0:69:33       0|1:100:19      0|0:100:70
+1      9873158 rs6666582       C       T       .       PASS    AA=C;DP=120;HM2 GT:GQ:DP        0|0:69:33       0|1:100:19      0|0:100:71
+2      151069089       rs6736019       A       C       .       PASS    AA=A;DP=124     GT:GQ:DP        0|0:69:33       0|1:100:20      0|0:100:74
+12     102658025       rs61549164      A       T       .       PASS    AA=A;DP=117     GT:GQ:DP        0|0:69:33       0|1:100:21      0|0:100:63
+12     74627396        rs61925120      C       A       .       PASS    AA=C;DP=112     GT:GQ:DP        0|0:69:33       0|1:100:22      0|0:100:56
+16     52781639        rs28703120      G       A       .       PASS    AA=G;DP=121     GT:GQ:DP        0|0:69:33       0|1:100:22      0|0:100:69
+15     88317502        rs60514632      G       T       .       PASS    AA=G;DP=122     GT:GQ:DP        0|0:69:33       0|1:100:22      0|0:100:70
+15     93959998        rs11073440      C       T       .       PASS    AA=T;DP=140     GT:GQ:DP        0|0:69:33       0|1:100:23      0|0:100:83
+5      116933946       rs58799303      A       T       .       PASS    AA=A;DP=155     GT:GQ:DP        0|0:69:33       0|1:100:30      0|0:100:93
+10     75692451        rs7914995       G       T       .       PASS    AA=G;DP=120     GT:GQ:DP        0|0:69:33       0|1:100:31      0|0:20:17
+2      124991400       .       T       G       .       PASS    AA=t;DP=149     GT:GQ:DP        0|0:69:33       0|1:100:32      0|0:100:86
+7      14439644        .       G       T       .       PASS    AA=G;DP=109     GT:GQ:DP        0|0:69:33       1|0:100:20      0|1:100:56
+6      2087232 rs17134714      A       C       .       PASS    AA=A;DP=130     GT:GQ:DP        0|0:69:33       1|1:37:16       0|1:100:78
+19     2945921 rs34551565      G       A       .       PASS    AA=G;DP=96      GT:GQ:DP        0|0:69:34       1|0:100:13      0|1:100:50
+3      25231686        .       G       T       .       PASS    AA=G;DP=144     GT:GQ:DP        0|0:69:34       1|0:100:24      0|1:100:89
+10     26486938        rs57058011      A       G       .       PASS    AA=A;DP=131     GT:GQ:DP        0|0:69:34       1|0:100:25      0|1:100:73
+13     58443306        rs9538260       A       C       .       PASS    AA=C;DP=137     GT:GQ:DP        0|0:69:34       1|0:100:26      0|1:100:82
+3      195970022       rs56358288      C       T       .       PASS    AA=C;DP=143     GT:GQ:DP        0|0:69:34       1|0:100:26      0|1:100:82
+8      38787230        rs12682108      G       A       .       PASS    AA=G;DP=120     GT:GQ:DP        0|0:69:34       1|0:100:28      0|1:100:56
+5      125818994       rs13182612      T       G       .       PASS    AA=T;DP=138     GT:GQ:DP        0|0:69:34       1|0:100:31      0|1:100:73
+8      110774107       rs7833977       G       C       .       PASS    AA=G;DP=155     GT:GQ:DP        0|0:69:34       1|0:100:33      0|1:100:88
+13     94330900        .       C       T       .       PASS    AA=C;DP=143     GT:GQ:DP        0|0:69:34       1|0:100:37      0|1:100:70
+8      20779999        rs28433277      T       C       .       PASS    AA=T;DP=119     GT:GQ:DP        0|0:69:34       1|0:21:13       0|1:100:72
+10     79279762        rs1261994       A       C       .       PASS    AA=C;DP=125     GT:GQ:DP        0|0:69:34       1|0:85:21       0|1:100:69
+3      120541109       .       A       T       .       PASS    AA=A;DP=113     GT:GQ:DP        0|0:69:34       1|0:92:10       0|1:100:72
+18     45670663        rs1787552       T       C       .       PASS    AA=t;DP=118     GT:GQ:DP        0|0:69:37       1|0:96:23       0|1:100:57
+10     49432813        rs57736095      G       A       .       PASS    AA=G;DP=134     GT:GQ:DP        0|0:69:39       1|1:43:17       0|1:100:77
+X      85401194        .       A       T       .       PASS    AA=a;DP=95      GT:GQ:DP        0|0:6:9 1|0:69:30       0|1:100:25
+15     66884065        .       C       T       .       PASS    AA=c;DP=88      GT:GQ:DP        0|0:70:23       1|0:5:13        0|1:100:41
+12     54654293        .       A       G       .       PASS    AA=A;DP=93      GT:GQ:DP        0|0:70:23       1|0:80:9        0|1:100:58
+22     34085501        rs9619530       C       G       .       PASS    AA=C;DP=105     GT:GQ:DP        0|0:70:24       1|1:12:13       0|1:100:68
+19     15543665        rs7252070       A       G       .       PASS    AA=a;DP=127     GT:GQ:DP        0|0:70:26       0|1:100:20      0|0:100:81
+X      154639715       .       A       G       .       PASS    AA=N;DP=78      GT:GQ:DP        0|0:70:27       0|1:100:20      0|0:78:26
+1      1974481 .       C       A       .       PASS    AA=C;DP=111     GT:GQ:DP        0|0:70:27       1|0:100:20      0|1:100:64
+11     5225198 rs7483789       T       G       .       PASS    AA=T;DP=115     GT:GQ:DP        0|0:70:28       0|1:100:24      0|0:100:64
+9      14627052        rs10810196      C       T       .       PASS    AA=C;DP=118     GT:GQ:DP        0|0:70:28       1|0:94:13       0|1:100:60
+7      113900982       .       A       T       .       PASS    AA=A;DP=109     GT:GQ:DP        0|0:70:29       1|0:48:21       0|1:100:58
+9      100845879       rs949802        G       A       .       PASS    AA=G;DP=143     GT:GQ:DP        0|0:70:29       1|0:72:27       0|1:100:86
+7      17192132        rs7795793       C       A       .       PASS    AA=A;DP=134     GT:GQ:DP        0|0:70:29       1|0:76:25       0|1:100:37
+19     23326828        rs59937738      G       A       .       PASS    AA=G;DP=104     GT:GQ:DP        0|0:70:29       1|0:95:28       0|1:100:36
+20     8709614 rs6056105       G       A       .       PASS    AA=A;DP=111     GT:GQ:DP        0|0:70:30       1|0:100:22      0|1:100:57
+20     60468310        .       C       A       .       PASS    AA=C;DP=138     GT:GQ:DP        0|0:70:30       1|0:100:23      0|1:100:86
+1      230735895       rs11589828      T       A       .       PASS    AA=A;DP=168;HM2;HM3     GT:GQ:DP        0|0:70:31       0|1:100:31      0|0:100:48
+10     122532649       rs11199560      C       T       .       PASS    AA=C;DP=111     GT:GQ:DP        0|0:70:31       1|0:100:23      0|1:100:59
+17     16774475        rs3829586       G       A       .       PASS    AA=g;DP=105     GT:GQ:DP        0|0:70:31       1|0:80:12       0|1:100:64
+1      233130162       rs6665064       C       T       .       PASS    AA=T;DP=133;HM2;HM3     GT:GQ:DP        0|0:70:32       0|1:100:17      0|0:100:89
+12     120260430       .       A       T       .       PASS    AA=A;DP=90      GT:GQ:DP        0|0:70:32       0|1:100:21      0|0:93:31
+10     4455313 .       G       A       .       PASS    AA=G;DP=117     GT:GQ:DP        0|0:70:32       0|1:100:28      0|0:100:56
+5      68193313        rs4492071       A       C       .       PASS    AA=A;DP=143     GT:GQ:DP        0|0:70:32       0|1:100:43      0|0:100:64
+3      7040415 .       T       C       .       PASS    AA=T;DP=122     GT:GQ:DP        0|0:70:34       0|1:100:18      0|0:100:73
+5      160635594       rs594416        C       A       .       PASS    AA=C;DP=127     GT:GQ:DP        0|0:70:34       1|1:33:24       0|1:100:68
+1      169036975       .       C       G       .       PASS    AA=C;DP=136     GT:GQ:DP        0|0:70:35       0|1:100:28      0|0:100:76
+3      161304115       .       C       T       .       PASS    AA=C;DP=135     GT:GQ:DP        0|0:70:35       1|1:33:25       0|1:100:76
+2      123365438       rs296070        T       C       .       PASS    AA=C;DP=126     GT:GQ:DP        0|0:70:35       1|1:36:25       0|1:100:66
+14     99327619        .       T       C       .       PASS    AA=T;DP=141     GT:GQ:DP        0|0:70:35       1|1:73:26       0|1:100:86
+14     63104233        rs56898919      T       C       .       PASS    AA=T;DP=156     GT:GQ:DP        0|0:70:35       1|1:76:27       0|1:100:52
+8      6387201 rs2922869       T       C       .       PASS    AA=C;DP=120     GT:GQ:DP        0|0:70:36       1|0:100:24      0|1:100:60
+5      108162827       rs62363276      C       T       .       PASS    AA=T;DP=76      GT:GQ:DP        0|0:71:22       0|1:100:11      0|0:100:43
+7      35029045        .       C       T       .       PASS    AA=C;DP=72      GT:GQ:DP        0|0:71:22       0|1:100:12      0|0:100:36
+21     20674134        rs11909728      T       G       .       PASS    AA=T;DP=80      GT:GQ:DP        0|0:71:22       0|1:100:12      0|0:100:46
+7      15561761        .       T       C       .       PASS    AA=T;DP=85      GT:GQ:DP        0|0:71:22       0|1:100:12      0|0:100:52
+2      41850133        rs17039105      C       T       .       PASS    AA=C;DP=117     GT:GQ:DP        0|0:71:22       0|1:100:13      0|0:100:34
+5      115647255       rs62384461      G       T       .       PASS    AA=t;DP=74      GT:GQ:DP        0|0:71:22       0|1:100:14      0|0:100:36
+19     12613173        rs8112964       C       T       .       PASS    AA=c;DP=84      GT:GQ:DP        0|0:71:22       0|1:100:14      0|0:100:49
+3      55868297        rs12636793      C       T       .       PASS    AA=C;DP=113     GT:GQ:DP        0|0:71:22       0|1:100:14      0|0:100:79
+4      28547812        .       T       C       .       PASS    AA=T;DP=74      GT:GQ:DP        0|0:71:22       0|1:100:15      0|0:100:36
+2      173830151       .       T       C       .       PASS    AA=T;DP=88      GT:GQ:DP        0|0:71:22       0|1:100:15      0|0:100:51
+2      127660348       .       A       G       .       PASS    AA=A;DP=94      GT:GQ:DP        0|0:71:22       0|1:100:15      0|0:100:58
+9      135066874       rs10901242      C       T       .       PASS    AA=C;DP=108     GT:GQ:DP        0|0:71:22       0|1:100:15      0|0:100:71
+10     55987043        rs7908308       G       A       .       PASS    AA=G;DP=110     GT:GQ:DP        0|0:71:22       0|1:100:15      0|0:100:76
+14     71804676        rs17093774      G       C       .       PASS    AA=G;DP=102     GT:GQ:DP        0|0:71:22       0|1:100:16      0|0:100:47
+6      146806430       rs7763736       A       G       .       PASS    AA=G;DP=84      GT:GQ:DP        0|0:71:22       0|1:100:16      0|0:100:47
+7      10181551        rs35435889      G       T       .       PASS    AA=G;DP=89      GT:GQ:DP        0|0:71:22       0|1:100:16      0|0:100:51
+5      41328185        .       A       G       .       PASS    AA=A;DP=98      GT:GQ:DP        0|0:71:22       0|1:100:16      0|0:100:58
+10     3068099 rs59612888      C       A       .       PASS    AA=A;DP=114     GT:GQ:DP        0|0:71:22       0|1:100:16      0|0:100:77
+3      134545761       .       A       C       .       PASS    AA=A;DP=81      GT:GQ:DP        0|0:71:22       0|1:100:17      0|0:100:41
+22     16222312        .       G       A       .       PASS    AA=G;DP=90      GT:GQ:DP        0|0:71:22       0|1:100:17      0|0:100:50
+9      79155451        .       A       G       .       PASS    AA=A;DP=99      GT:GQ:DP        0|0:71:22       0|1:100:17      0|0:100:54
+9      86345264        rs55726404      A       T       .       PASS    AA=A;DP=99      GT:GQ:DP        0|0:71:22       0|1:100:17      0|0:100:61
+11     22906292        rs4409818       A       G       .       PASS    AA=A;DP=107     GT:GQ:DP        0|0:71:22       0|1:100:17      0|0:100:66
+3      116614581       .       C       G       .       PASS    AA=C;DP=110     GT:GQ:DP        0|0:71:22       0|1:100:17      0|0:100:72
+4      184565603       rs56268076      G       C       .       PASS    AA=C;DP=111     GT:GQ:DP        0|0:71:22       0|1:100:17      0|0:100:74
+2      230915545       .       C       G       .       PASS    AA=C;DP=116     GT:GQ:DP        0|0:71:22       0|1:100:17      0|0:100:77
+12     61690025        rs1250156       C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        0|0:71:22       0|1:100:17      0|0:100:80
+14     42012421        rs10148996      C       T       .       PASS    AA=C;DP=80      GT:GQ:DP        0|0:71:22       0|1:100:17      0|0:84:28
+2      202314438       rs10451572      C       T       .       PASS    AA=C;DP=77      GT:GQ:DP        0|0:71:22       0|1:100:18      0|0:100:38
+20     23284892        rs12625948      C       A       .       PASS    AA=C;DP=84      GT:GQ:DP        0|0:71:22       0|1:100:18      0|0:100:41
+15     56010595        .       A       C       .       PASS    AA=A;DP=114     GT:GQ:DP        0|0:71:22       0|1:100:18      0|0:100:62
+8      75245743        .       T       C       .       PASS    AA=T;DP=103     GT:GQ:DP        0|0:71:22       0|1:100:18      0|0:100:62
+1      57718615        .       T       C       .       PASS    AA=T;DP=106     GT:GQ:DP        0|0:71:22       0|1:100:18      0|0:100:66
+1      82875520        rs6659980       A       G       .       PASS    AA=G;DP=104     GT:GQ:DP        0|0:71:22       0|1:100:18      0|0:100:67
+1      213316552       .       A       G       .       PASS    AA=A;DP=119     GT:GQ:DP        0|0:71:22       0|1:100:18      0|0:100:79
+16     13359368        .       C       T       .       PASS    AA=N;DP=128     GT:GQ:DP        0|0:71:22       0|1:100:18      0|0:100:85
+8      19683789        rs7836748       T       C       .       PASS    AA=C;DP=86      GT:GQ:DP        0|0:71:22       0|1:100:19      0|0:100:43
+2      65873385        .       G       T       .       PASS    AA=G;DP=92      GT:GQ:DP        0|0:71:22       0|1:100:19      0|0:100:52
+7      84294579        rs10260615      G       A       .       PASS    AA=G;DP=96      GT:GQ:DP        0|0:71:22       0|1:100:19      0|0:100:56
+3      19764634        rs62279380      C       T       .       PASS    AA=C;DP=119     GT:GQ:DP        0|0:71:22       0|1:100:19      0|0:100:78
+4      163933858       rs28660668      T       G       .       PASS    AA=T;DP=79      GT:GQ:DP        0|0:71:22       0|1:100:19      0|0:52:28
+16     13246736        rs2214255       C       G       .       PASS    AA=C;DP=123     GT:GQ:DP        0|0:71:22       0|1:100:20      0|0:100:42
+X      137770807       rs7060077       A       G       .       PASS    AA=A;DP=137     GT:GQ:DP        0|0:71:22       0|1:100:20      0|0:100:57
+9      23643502        rs13301543      T       C       .       PASS    AA=T;DP=108     GT:GQ:DP        0|0:71:22       0|1:100:20      0|0:100:62
+1      79528974        rs6424647       A       G       .       PASS    AA=A;DP=107     GT:GQ:DP        0|0:71:22       0|1:100:20      0|0:100:65
+17     57737555        rs11079470      C       T       .       PASS    AA=c;DP=109     GT:GQ:DP        0|0:71:22       0|1:100:20      0|0:100:67
+15     23909480        rs7167127       C       A       .       PASS    AA=C;DP=113     GT:GQ:DP        0|0:71:22       0|1:100:20      0|0:100:71
+10     25670830        .       C       G       .       PASS    AA=C;DP=114     GT:GQ:DP        0|0:71:22       0|1:100:20      0|0:100:72
+16     60029748        rs1374074       C       T       .       PASS    AA=C;DP=118     GT:GQ:DP        0|0:71:22       0|1:100:20      0|0:100:77
+4      137967054       rs62313740      T       A       .       PASS    AA=T;DP=86      GT:GQ:DP        0|0:71:22       0|1:100:20      0|0:90:30
+5      106493968       .       T       C       .       PASS    AA=T;DP=116     GT:GQ:DP        0|0:71:22       0|1:100:20      0|0:93:31
+5      177676247       .       G       A       .       PASS    AA=G;DP=80      GT:GQ:DP        0|0:71:22       0|1:100:21      0|0:100:36
+X      5473042 rs16983726      T       C       .       PASS    AA=.;DP=134     GT:GQ:DP        0|0:71:22       0|1:100:21      0|0:100:48
+3      69787902        rs36077196      G       A       .       PASS    AA=G;DP=93      GT:GQ:DP        0|0:71:22       0|1:100:21      0|0:100:50
+11     80395457        .       C       A       .       PASS    AA=A;DP=98      GT:GQ:DP        0|0:71:22       0|1:100:21      0|0:100:58
+19     61359644        .       C       T       .       PASS    AA=C;DP=106     GT:GQ:DP        0|0:71:22       0|1:100:21      0|0:100:62
+1      11314204        .       C       T       .       PASS    AA=C;DP=121     GT:GQ:DP        0|0:71:22       0|1:100:21      0|0:100:76
+16     17182631        .       T       C       .       PASS    AA=T;DP=116     GT:GQ:DP        0|0:71:22       0|1:100:21      0|0:100:77
+13     67094175        rs9541183       G       C       .       PASS    AA=A;DP=90      GT:GQ:DP        0|0:71:22       0|1:100:22      0|0:100:36
+10     117677310       rs2620961       A       C       .       PASS    AA=A;DP=86      GT:GQ:DP        0|0:71:22       0|1:100:22      0|0:100:42
+8      3761691 .       G       A       .       PASS    AA=G;DP=89      GT:GQ:DP        0|0:71:22       0|1:100:22      0|0:100:47
+11     20715897        .       A       G       .       PASS    AA=G;DP=122     GT:GQ:DP        0|0:71:22       0|1:100:22      0|0:100:58
+19     15858422        rs2074901       A       C       .       PASS    AA=a;DP=110     GT:GQ:DP        0|0:71:22       0|1:100:22      0|0:100:69
+6      129777375       .       G       A       .       PASS    AA=G;DP=94      GT:GQ:DP        0|0:71:22       0|1:100:23      0|0:100:50
+5      103210140       rs1422092       C       T       .       PASS    AA=T;DP=99      GT:GQ:DP        0|0:71:22       0|1:100:23      0|0:100:55
+16     49524320        rs12444741      T       C       .       PASS    AA=T;DP=103     GT:GQ:DP        0|0:71:22       0|1:100:23      0|0:100:56
+4      83990440        rs9999544       T       C       .       PASS    AA=T;DP=102     GT:GQ:DP        0|0:71:22       0|1:100:23      0|0:100:56
+8      137440250       rs58997652      A       G       .       PASS    AA=G;DP=110     GT:GQ:DP        0|0:71:22       0|1:100:23      0|0:100:62
+18     65756787        rs12970649      C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        0|0:71:22       0|1:100:23      0|0:100:68
+3      80294221        .       A       G       .       PASS    AA=A;DP=119     GT:GQ:DP        0|0:71:22       0|1:100:23      0|0:100:72
+10     36066057        .       G       A       .       PASS    AA=G;DP=120     GT:GQ:DP        0|0:71:22       0|1:100:23      0|0:100:74
+6      140424019       rs17069755      T       A       .       PASS    AA=T;DP=132     GT:GQ:DP        0|0:71:22       0|1:100:23      0|0:100:86
+2      161699904       rs3754978       G       A       .       PASS    AA=G;DP=142     GT:GQ:DP        0|0:71:22       0|1:100:23      0|0:100:97
+9      1584069 .       C       G       .       PASS    AA=C;DP=96      GT:GQ:DP        0|0:71:22       0|1:100:24      0|0:100:53
+13     55089817        .       T       A       .       PASS    AA=A;DP=113     GT:GQ:DP        0|0:71:22       0|1:100:24      0|0:100:61
+9      111474909       .       C       T       .       PASS    AA=C;DP=113     GT:GQ:DP        0|0:71:22       0|1:100:24      0|0:100:68
+8      116739294       rs11997838      C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        0|0:71:22       0|1:100:24      0|0:100:74
+5      117761662       rs6888935       C       G       .       PASS    AA=C;DP=121     GT:GQ:DP        0|0:71:22       0|1:100:24      0|0:96:33
+7      10106703        rs2159733       G       A       .       PASS    AA=G;DP=106     GT:GQ:DP        0|0:71:22       0|1:100:25      0|0:100:44
+4      159058802       rs10011407      T       A       .       PASS    AA=T;DP=108     GT:GQ:DP        0|0:71:22       0|1:100:25      0|0:100:59
+3      122193942       rs9875603       T       A       .       PASS    AA=T;DP=112     GT:GQ:DP        0|0:71:22       0|1:100:25      0|0:100:70
+8      4636417 .       C       T       .       PASS    AA=C;DP=112     GT:GQ:DP        0|0:71:22       0|1:100:25      0|0:100:70
+1      173987507       .       T       C       .       PASS    AA=T;DP=118     GT:GQ:DP        0|0:71:22       0|1:100:25      0|0:100:71
+18     65838324        rs4891802       A       C       .       PASS    AA=A;DP=119     GT:GQ:DP        0|0:71:22       0|1:100:25      0|0:100:73
+5      171145962       rs194230        C       G       .       PASS    AA=C;DP=126     GT:GQ:DP        0|0:71:22       0|1:100:25      0|0:100:80
+13     110794761       rs56305028      C       T       .       PASS    AA=C;DP=112     GT:GQ:DP        0|0:71:22       0|1:100:26      0|0:100:62
+17     5182848 .       A       T       .       PASS    AA=A;DP=114     GT:GQ:DP        0|0:71:22       0|1:100:26      0|0:100:66
+6      91112853        .       C       T       .       PASS    AA=C;DP=113     GT:GQ:DP        0|0:71:22       0|1:100:26      0|0:100:67
+1      163079432       .       G       A       .       PASS    AA=G;DP=115     GT:GQ:DP        0|0:71:22       0|1:100:26      0|0:100:70
+10     107627888       .       C       A       .       PASS    AA=C;DP=127     GT:GQ:DP        0|0:71:22       0|1:100:26      0|0:100:78
+18     38910470        .       A       C       .       PASS    AA=A;DP=130     GT:GQ:DP        0|0:71:22       0|1:100:27      0|0:100:34
+8      17062478        rs59991057      A       G       .       PASS    AA=A;DP=147     GT:GQ:DP        0|0:71:22       0|1:100:27      0|0:100:54
+6      441643  .       G       A       .       PASS    AA=g;DP=108     GT:GQ:DP        0|0:71:22       0|1:100:27      0|0:100:57
+6      156599036       rs6933935       G       T       .       PASS    AA=G;DP=107     GT:GQ:DP        0|0:71:22       0|1:100:27      0|0:100:58
+3      34089987        rs7628777       A       G       .       PASS    AA=A;DP=126     GT:GQ:DP        0|0:71:22       0|1:100:27      0|0:100:78
+10     45054719        .       A       T       .       PASS    AA=.;DP=135     GT:GQ:DP        0|0:71:22       0|1:100:27      0|0:100:83
+10     80344865        rs11002731      C       T       .       PASS    AA=C;DP=138     GT:GQ:DP        0|0:71:22       0|1:100:27      0|0:100:90
+12     105117898       rs12319542      T       A       .       PASS    AA=T;DP=132     GT:GQ:DP        0|0:71:22       0|1:100:28      0|0:100:36
+5      118255002       rs7724403       A       T       .       PASS    AA=A;DP=105     GT:GQ:DP        0|0:71:22       0|1:100:28      0|0:100:56
+22     39870225        rs9611505       T       C       .       PASS    AA=T;DP=110     GT:GQ:DP        0|0:71:22       0|1:100:28      0|0:100:58
+3      119200928       rs13078800      T       A       .       PASS    AA=T;DP=127     GT:GQ:DP        0|0:71:22       0|1:100:28      0|0:100:77
+11     21480543        rs58972140      C       T       .       PASS    AA=C;DP=133     GT:GQ:DP        0|0:71:22       0|1:100:28      0|0:100:80
+8      59560207        .       A       G       .       PASS    AA=A;DP=94      GT:GQ:DP        0|0:71:22       0|1:100:29      0|0:100:43
+1      92780287        rs12564911      G       A       .       PASS    AA=G;DP=103;HM2 GT:GQ:DP        0|0:71:22       0|1:100:29      0|0:100:54
+6      30123309        rs259943        T       C       .       PASS    AA=.;DP=109     GT:GQ:DP        0|0:71:22       0|1:100:29      0|0:100:60
+1      166051886       rs1120604       T       C       .       PASS    AA=T;DP=147;HM2;HM3     GT:GQ:DP        0|0:71:22       0|1:100:30      0|0:100:50
+10     8678107 rs11591699      C       A       .       PASS    AA=A;DP=112     GT:GQ:DP        0|0:71:22       0|1:100:30      0|0:100:59
+11     86498126        .       A       G       .       PASS    AA=A;DP=128     GT:GQ:DP        0|0:71:22       0|1:100:30      0|0:100:78
+2      12497966        rs58558410      C       T       .       PASS    AA=C;DP=138     GT:GQ:DP        0|0:71:22       0|1:100:31      0|0:100:80
+13     43155756        rs9533589       C       T       .       PASS    AA=C;DP=111     GT:GQ:DP        0|0:71:22       0|1:100:32      0|0:100:57
+6      113191299       rs9481280       C       T       .       PASS    AA=T;DP=125     GT:GQ:DP        0|0:71:22       0|1:100:32      0|0:100:70
+13     58142285        .       A       T       .       PASS    AA=A;DP=129     GT:GQ:DP        0|0:71:22       0|1:100:32      0|0:100:74
+11     123840984       .       T       G       .       PASS    AA=T;DP=145     GT:GQ:DP        0|0:71:22       0|1:100:36      0|0:100:83
+3      22277650        .       A       G       .       PASS    AA=A;DP=127     GT:GQ:DP        0|0:71:22       0|1:100:38      0|0:100:65
+22     18568199        rs658353        T       C       .       PASS    AA=C;DP=98      GT:GQ:DP        0|0:71:23       0|1:100:11      0|0:100:64
+4      68686264        rs4645263       G       A       .       PASS    AA=A;DP=107     GT:GQ:DP        0|0:71:23       0|1:100:11      0|0:100:74
+17     71097623        .       T       C       .       PASS    AA=C;DP=109     GT:GQ:DP        0|0:71:23       0|1:100:11      0|0:100:75
+7      151015939       .       C       T       .       PASS    AA=C;DP=92      GT:GQ:DP        0|0:71:23       0|1:100:12      0|0:100:46
+10     4034646 rs1540989       T       C       .       PASS    AA=C;DP=89      GT:GQ:DP        0|0:71:23       0|1:100:12      0|0:100:53
+15     53398725        rs28668016      A       G       .       PASS    AA=A;DP=110     GT:GQ:DP        0|0:71:23       0|1:100:15      0|0:100:73
+1      225655179       rs3000812       A       G       .       PASS    AA=A;DP=74;HM2;HM3      GT:GQ:DP        0|0:71:23       0|1:100:15      0|0:75:25
+2      226128174       .       A       G       .       PASS    AA=A;DP=87      GT:GQ:DP        0|0:71:23       0|1:100:16      0|0:100:43
+13     55573665        rs157287        C       T       .       PASS    AA=T;DP=103     GT:GQ:DP        0|0:71:23       0|1:100:16      0|0:100:64
+19     1984081 .       A       G       .       PASS    AA=A;DP=104     GT:GQ:DP        0|0:71:23       0|1:100:16      0|0:100:64
+15     85755965        rs8042023       T       C       .       PASS    AA=T;DP=114     GT:GQ:DP        0|0:71:23       0|1:100:16      0|0:100:75
+10     125921611       .       G       A       .       PASS    AA=A;DP=120     GT:GQ:DP        0|0:71:23       0|1:100:16      0|0:100:80
+4      29899381        .       A       G       .       PASS    AA=A;DP=116     GT:GQ:DP        0|0:71:23       0|1:100:17      0|0:100:39
+5      153789159       rs7704185       C       T       .       PASS    AA=T;DP=90      GT:GQ:DP        0|0:71:23       0|1:100:17      0|0:100:46
+13     85338655        rs9575975       G       A       .       PASS    AA=A;DP=103     GT:GQ:DP        0|0:71:23       0|1:100:17      0|0:100:64
+5      109729014       .       G       A       .       PASS    AA=G;DP=102     GT:GQ:DP        0|0:71:23       0|1:100:17      0|0:100:65
+11     25141894        rs10834613      A       C       .       PASS    AA=C;DP=124     GT:GQ:DP        0|0:71:23       0|1:100:17      0|0:100:69
+8      35547177        rs6995256       T       G       .       PASS    AA=T;DP=127     GT:GQ:DP        0|0:71:23       0|1:100:18      0|0:100:41
+2      160282614       rs10172847      G       T       .       PASS    AA=G;DP=106     GT:GQ:DP        0|0:71:23       0|1:100:18      0|0:100:61
+5      118848863       rs2546208       G       C       .       PASS    AA=G;DP=104     GT:GQ:DP        0|0:71:23       0|1:100:18      0|0:100:61
+1      93876605        rs236272        G       A       .       PASS    AA=G;DP=104     GT:GQ:DP        0|0:71:23       0|1:100:18      0|0:100:63
+10     105445916       rs1994838       T       C       .       PASS    AA=T;DP=122     GT:GQ:DP        0|0:71:23       0|1:100:18      0|0:100:81
+9      132683995       .       C       T       .       PASS    AA=T;DP=102     GT:GQ:DP        0|0:71:23       0|1:100:19      0|0:100:61
+19     57157877        rs6509607       A       G       .       PASS    AA=a;DP=115     GT:GQ:DP        0|0:71:23       0|1:100:19      0|0:100:72
+20     8784024 rs6056208       A       G       .       PASS    AA=A;DP=99      GT:GQ:DP        0|0:71:23       0|1:100:20      0|0:100:57
+8      60017306        rs16924314      T       C       .       PASS    AA=T;DP=101     GT:GQ:DP        0|0:71:23       0|1:100:20      0|0:100:58
+13     21690901        .       A       T       .       PASS    AA=A;DP=115     GT:GQ:DP        0|0:71:23       0|1:100:20      0|0:100:68
+15     77989975        rs7171636       C       T       .       PASS    AA=C;DP=118     GT:GQ:DP        0|0:71:23       0|1:100:20      0|0:100:74
+9      32192233        .       G       A       .       PASS    AA=g;DP=136     GT:GQ:DP        0|0:71:23       0|1:100:20      0|0:100:95
+X      86076768        rs2213473       C       T       .       PASS    AA=C;DP=91      GT:GQ:DP        0|0:71:23       0|1:100:20      0|0:72:24
+1      86123142        rs12755267      T       C       .       PASS    AA=T;DP=116;HM2 GT:GQ:DP        0|0:71:23       0|1:100:21      0|0:100:34
+6      153417161       rs4527723       G       A       .       PASS    AA=G;DP=95      GT:GQ:DP        0|0:71:23       0|1:100:21      0|0:100:51
+2      11758742        rs6716192       T       C       .       PASS    AA=C;DP=114     GT:GQ:DP        0|0:71:23       0|1:100:21      0|0:100:71
+11     89840487        rs7936999       C       T       .       PASS    AA=T;DP=113     GT:GQ:DP        0|0:71:23       0|1:100:23      0|0:100:67
+3      21250611        rs13322856      T       G       .       PASS    AA=T;DP=120     GT:GQ:DP        0|0:71:23       0|1:100:23      0|0:100:75
+4      171529436       .       T       C       .       PASS    AA=T;DP=127     GT:GQ:DP        0|0:71:23       0|1:100:23      0|0:100:81
+13     44000247        .       C       T       .       PASS    AA=C;DP=141     GT:GQ:DP        0|0:71:23       0|1:100:24      0|0:100:51
+14     60600368        rs12588631      A       T       .       PASS    AA=A;DP=111     GT:GQ:DP        0|0:71:23       0|1:100:24      0|0:100:65
+4      56397631        rs7658345       G       C       .       PASS    AA=C;DP=113     GT:GQ:DP        0|0:71:23       0|1:100:24      0|0:100:66
+4      42068339        rs2632709       A       C       .       PASS    AA=A;DP=131     GT:GQ:DP        0|0:71:23       0|1:100:24      0|0:100:82
+2      226423179       .       C       T       .       PASS    AA=C;DP=134     GT:GQ:DP        0|0:71:23       0|1:100:25      0|0:100:42
+7      117687298       .       G       A       .       PASS    AA=a;DP=126     GT:GQ:DP        0|0:71:23       0|1:100:25      0|0:100:78
+5      55839849        .       T       C       .       PASS    AA=T;DP=133     GT:GQ:DP        0|0:71:23       0|1:100:26      0|0:100:43
+1      151893461       .       C       A       .       PASS    AA=C;DP=144     GT:GQ:DP        0|0:71:23       0|1:100:26      0|0:100:55
+11     30123697        rs11030969      G       A       .       PASS    AA=G;DP=105     GT:GQ:DP        0|0:71:23       0|1:100:26      0|0:100:56
+5      141750568       .       G       A       .       PASS    AA=G;DP=122     GT:GQ:DP        0|0:71:23       0|1:100:27      0|0:100:70
+1      160139395       rs2341473       G       A       .       PASS    AA=G;DP=95;HM2;HM3      GT:GQ:DP        0|0:71:23       0|1:100:28      0|0:100:36
+3      175333284       rs6783874       G       A       .       PASS    AA=G;DP=149     GT:GQ:DP        0|0:71:23       0|1:100:28      0|0:100:47
+15     51837415        .       G       T       .       PASS    AA=G;DP=122     GT:GQ:DP        0|0:71:23       0|1:100:28      0|0:100:72
+1      119036451       rs2755115       G       A       .       PASS    AA=G;DP=121;HM2 GT:GQ:DP        0|0:71:23       0|1:100:31      0|0:100:51
+6      165073705       .       G       A       .       PASS    AA=A;DP=138     GT:GQ:DP        0|0:71:23       0|1:100:32      0|0:100:82
+2      46128431        rs7590029       A       T       .       PASS    AA=A;DP=114     GT:GQ:DP        0|0:71:23       0|1:100:33      0|0:100:55
+10     95647268        rs12356200      T       C       .       PASS    AA=T;DP=127     GT:GQ:DP        0|0:71:23       0|1:100:34      0|0:100:72
+1      71085909        rs55958766      C       T       .       PASS    AA=C;DP=138     GT:GQ:DP        0|0:71:23       0|1:100:34      0|0:100:81
+15     25688582        .       T       C       .       PASS    AA=T;DP=65      GT:GQ:DP        0|0:71:23       1|0:100:11      0|1:100:24
+4      179333633       rs2199082       T       A       .       PASS    AA=T;DP=70      GT:GQ:DP        0|0:71:23       1|0:100:13      0|1:100:25
+4      135432188       rs58672763      C       T       .       PASS    AA=C;DP=111     GT:GQ:DP        0|0:71:23       1|0:100:14      0|1:100:28
+19     15494477        .       G       A       .       PASS    AA=g;DP=89      GT:GQ:DP        0|0:71:23       1|0:100:14      0|1:100:39
+20     12451651        rs6041423       A       C       .       PASS    AA=A;DP=94      GT:GQ:DP        0|0:71:23       1|0:100:14      0|1:100:46
+10     119875438       rs7079687       T       C       .       PASS    AA=C;DP=94      GT:GQ:DP        0|0:71:23       1|0:100:14      0|1:100:57
+2      149628482       rs11681538      A       G       .       PASS    AA=A;DP=112     GT:GQ:DP        0|0:71:23       1|0:100:14      0|1:100:75
+4      87375214        rs6847635       T       A       .       PASS    AA=T;DP=77      GT:GQ:DP        0|0:71:23       1|0:100:15      0|1:100:38
+2      141556110       rs9287303       A       G       .       PASS    AA=A;DP=97      GT:GQ:DP        0|0:71:23       1|0:100:15      0|1:100:59
+4      10021087        rs59868112      T       C       .       PASS    AA=T;DP=108     GT:GQ:DP        0|0:71:23       1|0:100:15      0|1:100:70
+12     24287011        rs12312540      G       T       .       PASS    AA=G;DP=100     GT:GQ:DP        0|0:71:23       1|0:100:16      0|1:100:51
+8      58339549        rs57624567      T       C       .       PASS    AA=C;DP=90      GT:GQ:DP        0|0:71:23       1|0:100:16      0|1:100:52
+8      89228929        .       C       A       .       PASS    AA=C;DP=91      GT:GQ:DP        0|0:71:23       1|0:100:16      0|1:100:55
+3      177326164       rs61007292      C       T       .       PASS    AA=C;DP=98      GT:GQ:DP        0|0:71:23       1|0:100:16      0|1:100:60
+6      131406217       rs1569195       G       T       .       PASS    AA=G;DP=100     GT:GQ:DP        0|0:71:23       1|0:100:16      0|1:100:61
+5      85266031        rs62364171      C       T       .       PASS    AA=C;DP=103     GT:GQ:DP        0|0:71:23       1|0:100:16      0|1:100:65
+1      102507259       .       C       T       .       PASS    AA=t;DP=78      GT:GQ:DP        0|0:71:23       1|0:100:17      0|1:100:37
+2      100353291       rs58876304      A       G       .       PASS    AA=A;DP=92      GT:GQ:DP        0|0:71:23       1|0:100:17      0|1:100:54
+17     26097956        rs7503542       A       C       .       PASS    AA=.;DP=95      GT:GQ:DP        0|0:71:23       1|0:100:17      0|1:100:57
+4      27345533        .       A       C       .       PASS    AA=A;DP=104     GT:GQ:DP        0|0:71:23       1|0:100:17      0|1:100:64
+6      53845026        .       T       A       .       PASS    AA=T;DP=77      GT:GQ:DP        0|0:71:23       1|0:100:18      0|1:100:27
+9      14193152        rs10961419      G       A       .       PASS    AA=G;DP=94      GT:GQ:DP        0|0:71:23       1|0:100:18      0|1:100:54
+4      26001944        rs61577242      C       T       .       PASS    AA=C;DP=97      GT:GQ:DP        0|0:71:23       1|0:100:18      0|1:100:58
+7      121082181       rs7792163       T       G       .       PASS    AA=G;DP=104     GT:GQ:DP        0|0:71:23       1|0:100:18      0|1:100:62
+1      237453221       rs12126728      A       G       .       PASS    AA=a;DP=106;HM2 GT:GQ:DP        0|0:71:23       1|0:100:18      0|1:100:63
+9      13082076        rs12346832      T       C       .       PASS    AA=T;DP=105     GT:GQ:DP        0|0:71:23       1|0:100:18      0|1:100:63
+16     26751422        .       A       G       .       PASS    AA=A;DP=117     GT:GQ:DP        0|0:71:23       1|0:100:18      0|1:100:77
+11     90087441        .       C       T       .       PASS    AA=C;DP=91      GT:GQ:DP        0|0:71:23       1|0:100:19      0|1:100:35
+8      39506336        rs6474154       C       T       .       PASS    AA=c;DP=99      GT:GQ:DP        0|0:71:23       1|0:100:19      0|1:100:58
+7      31537512        rs10246647      A       T       .       PASS    AA=A;DP=108     GT:GQ:DP        0|0:71:23       1|0:100:19      0|1:100:63
+8      122677260       rs2016573       T       C       .       PASS    AA=T;DP=108     GT:GQ:DP        0|0:71:23       1|0:100:19      0|1:100:65
+16     78400917        .       A       G       .       PASS    AA=A;DP=117     GT:GQ:DP        0|0:71:23       1|0:100:19      0|1:100:75
+8      4993669 rs13261945      T       A       .       PASS    AA=T;DP=91      GT:GQ:DP        0|0:71:23       1|0:100:20      0|1:100:48
+1      237261722       .       A       G       .       PASS    AA=G;DP=96      GT:GQ:DP        0|0:71:23       1|0:100:20      0|1:100:54
+18     2542892 rs11080958      G       A       .       PASS    AA=G;DP=104     GT:GQ:DP        0|0:71:23       1|0:100:20      0|1:100:55
+18     22708349        rs16942897      C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        0|0:71:23       1|0:100:20      0|1:100:67
+12     60040744        rs2138421       C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        0|0:71:23       1|0:100:20      0|1:100:73
+18     8207788 rs7238009       T       C       .       PASS    AA=T;DP=117     GT:GQ:DP        0|0:71:23       1|0:100:20      0|1:100:73
+17     69183990        .       C       A       .       PASS    AA=C;DP=91      GT:GQ:DP        0|0:71:23       1|0:100:21      0|1:100:45
+10     34205705        rs1474921       G       A       .       PASS    AA=G;DP=100     GT:GQ:DP        0|0:71:23       1|0:100:21      0|1:100:57
+3      18237942        rs11916671      C       A       .       PASS    AA=A;DP=108     GT:GQ:DP        0|0:71:23       1|0:100:21      0|1:100:65
+4      189349943       rs55670952      G       T       .       PASS    AA=G;DP=108     GT:GQ:DP        0|0:71:23       1|0:100:21      0|1:100:65
+4      140959592       .       T       C       .       PASS    AA=T;DP=127     GT:GQ:DP        0|0:71:23       1|0:100:21      0|1:100:71
+12     92701858        rs10777544      G       C       .       PASS    AA=G;DP=126     GT:GQ:DP        0|0:71:23       1|0:100:21      0|1:100:82
+21     17849847        .       A       G       .       PASS    AA=a;DP=127     GT:GQ:DP        0|0:71:23       1|0:100:22      0|1:100:30
+11     119733992       .       G       C       .       PASS    AA=G;DP=102     GT:GQ:DP        0|0:71:23       1|0:100:22      0|1:100:39
+2      144300022       rs59796348      A       G       .       PASS    AA=A;DP=89      GT:GQ:DP        0|0:71:23       1|0:100:22      0|1:100:42
+7      109068470       rs7350020       A       G       .       PASS    AA=A;DP=87      GT:GQ:DP        0|0:71:23       1|0:100:22      0|1:100:43
+7      15348115        rs7799750       G       A       .       PASS    AA=G;DP=107     GT:GQ:DP        0|0:71:23       1|0:100:22      0|1:100:58
+11     63070498        rs870073        G       T       .       PASS    AA=G;DP=152     GT:GQ:DP        0|0:71:23       1|0:100:22      0|1:100:61
+6      112833426       rs7755413       G       A       .       PASS    AA=G;DP=107     GT:GQ:DP        0|0:71:23       1|0:100:22      0|1:100:61
+6      84811030        .       C       T       .       PASS    AA=C;DP=114     GT:GQ:DP        0|0:71:23       1|0:100:22      0|1:100:68
+2      52547885        rs12614961      T       C       .       PASS    AA=T;DP=126     GT:GQ:DP        0|0:71:23       1|0:100:22      0|1:100:82
+11     110672986       rs7944895       C       G       .       PASS    AA=C;DP=132     GT:GQ:DP        0|0:71:23       1|0:100:22      0|1:100:87
+12     10398772        .       A       T       .       PASS    AA=A;DP=95      GT:GQ:DP        0|0:71:23       1|0:100:23      0|1:100:49
+5      119121745       .       T       C       .       PASS    AA=T;DP=96      GT:GQ:DP        0|0:71:23       1|0:100:23      0|1:100:50
+3      162698249       rs2404561       A       G       .       PASS    AA=A;DP=111     GT:GQ:DP        0|0:71:23       1|0:100:23      0|1:100:62
+12     72043412        .       T       C       .       PASS    AA=T;DP=111     GT:GQ:DP        0|0:71:23       1|0:100:23      0|1:100:65
+3      65677925        rs9815082       A       G       .       PASS    AA=A;DP=130     GT:GQ:DP        0|0:71:23       1|0:100:23      0|1:100:87
+14     27152786        rs60614706      A       T       .       PASS    AA=A;DP=87      GT:GQ:DP        0|0:71:23       1|0:100:24      0|1:100:28
+6      28731734        .       G       A       .       PASS    AA=G;DP=86      GT:GQ:DP        0|0:71:23       1|0:100:24      0|1:100:29
+18     39919216        rs57955778      C       T       .       PASS    AA=C;DP=94      GT:GQ:DP        0|0:71:23       1|0:100:24      0|1:100:46
+6      108581628       rs9400210       T       C       .       PASS    AA=T;DP=113     GT:GQ:DP        0|0:71:23       1|0:100:24      0|1:100:68
+7      119236456       rs1357674       A       G       .       PASS    AA=G;DP=116     GT:GQ:DP        0|0:71:23       1|0:100:24      0|1:100:69
+1      179939305       rs7513540       T       G       .       PASS    AA=T;DP=118;HM2;HM3     GT:GQ:DP        0|0:71:23       1|0:100:24      0|1:100:72
+14     69677947        .       T       A       .       PASS    AA=T;DP=120     GT:GQ:DP        0|0:71:23       1|0:100:24      0|1:100:74
+5      160685766       .       A       G       .       PASS    AA=A;DP=95      GT:GQ:DP        0|0:71:23       1|0:100:25      0|1:100:38
+11     95437958        rs12284725      A       C       .       PASS    AA=A;DP=86      GT:GQ:DP        0|0:71:23       1|0:100:25      0|1:100:39
+2      227836051       rs4675161       A       G       .       PASS    AA=A;DP=91      GT:GQ:DP        0|0:71:23       1|0:100:25      0|1:100:43
+8      17330837        rs9325813       A       T       .       PASS    AA=A;DP=99      GT:GQ:DP        0|0:71:23       1|0:100:25      0|1:100:50
+2      38830906        rs3134630       T       C       .       PASS    AA=T;DP=108     GT:GQ:DP        0|0:71:23       1|0:100:25      0|1:100:57
+18     38506804        .       A       T       .       PASS    AA=A;DP=111     GT:GQ:DP        0|0:71:23       1|0:100:25      0|1:100:65
+2      49911271        rs7570710       C       T       .       PASS    AA=C;DP=116     GT:GQ:DP        0|0:71:23       1|0:100:25      0|1:100:68
+11     37602855        rs1563983       A       G       .       PASS    AA=G;DP=117     GT:GQ:DP        0|0:71:23       1|0:100:25      0|1:100:73
+7      117217096       rs35441392      A       T       .       PASS    AA=T;DP=119     GT:GQ:DP        0|0:71:23       1|0:100:25      0|1:100:74
+4      21466831        rs6840539       A       T       .       PASS    AA=A;DP=128     GT:GQ:DP        0|0:71:23       1|0:100:25      0|1:100:78
+3      3888224 rs9823717       A       C       .       PASS    AA=A;DP=128     GT:GQ:DP        0|0:71:23       1|0:100:25      0|1:100:79
+10     126742919       .       C       A       .       PASS    AA=C;DP=129     GT:GQ:DP        0|0:71:23       1|0:100:25      0|1:100:80
+10     108172420       rs11816267      C       T       .       PASS    AA=T;DP=95      GT:GQ:DP        0|0:71:23       1|0:100:26      0|1:100:46
+3      60581231        .       A       G       .       PASS    AA=A;DP=100     GT:GQ:DP        0|0:71:23       1|0:100:26      0|1:100:53
+15     98649124        rs28415860      G       A       .       PASS    AA=G;DP=110     GT:GQ:DP        0|0:71:23       1|0:100:27      0|1:100:58
+12     10992370        .       T       C       .       PASS    AA=T;DP=114     GT:GQ:DP        0|0:71:23       1|0:100:27      0|1:100:64
+4      12196356        rs6854213       T       C       .       PASS    AA=T;DP=115     GT:GQ:DP        0|0:71:23       1|0:100:27      0|1:100:67
+21     23606348        .       T       C       .       PASS    AA=T;DP=118     GT:GQ:DP        0|0:71:23       1|0:100:27      0|1:100:69
+14     26078999        .       T       C       .       PASS    AA=T;DP=119     GT:GQ:DP        0|0:71:23       1|0:100:27      0|1:100:70
+12     79671341        rs7971087       G       A       .       PASS    AA=A;DP=132     GT:GQ:DP        0|0:71:23       1|0:100:27      0|1:100:71
+12     97136017        rs11109394      G       C       .       PASS    AA=G;DP=124     GT:GQ:DP        0|0:71:23       1|0:100:27      0|1:100:75
+5      38566707        .       G       A       .       PASS    AA=G;DP=138     GT:GQ:DP        0|0:71:23       1|0:100:27      0|1:100:85
+10     54121885        rs61274710      A       G       .       PASS    AA=A;DP=138     GT:GQ:DP        0|0:71:23       1|0:100:27      0|1:100:86
+6      77037327        rs9352285       G       C       .       PASS    AA=C;DP=96      GT:GQ:DP        0|0:71:23       1|0:100:28      0|1:100:45
+9      26786106        rs12349045      C       T       .       PASS    AA=.;DP=102     GT:GQ:DP        0|0:71:23       1|0:100:28      0|1:100:49
+20     51294013        .       C       T       .       PASS    AA=C;DP=109     GT:GQ:DP        0|0:71:23       1|0:100:28      0|1:100:64
+2      206108501       .       A       C       .       PASS    AA=A;DP=119     GT:GQ:DP        0|0:71:23       1|0:100:28      0|1:100:68
+10     19483451        rs16918302      G       A       .       PASS    AA=G;DP=127     GT:GQ:DP        0|0:71:23       1|0:100:28      0|1:100:73
+10     76687012        rs1700982       C       G       .       PASS    AA=C;DP=132     GT:GQ:DP        0|0:71:23       1|0:100:28      0|1:100:82
+11     36162545        rs12278309      A       G       .       PASS    AA=A;DP=135     GT:GQ:DP        0|0:71:23       1|0:100:29      0|1:100:40
+5      62333568        .       G       A       .       PASS    AA=A;DP=138     GT:GQ:DP        0|0:71:23       1|0:100:29      0|1:100:43
+20     53217143        rs1571172       T       G       .       PASS    AA=G;DP=125     GT:GQ:DP        0|0:71:23       1|0:100:29      0|1:100:75
+5      38093895        .       A       G       .       PASS    AA=A;DP=103     GT:GQ:DP        0|0:71:23       1|0:100:30      0|1:100:39
+2      16612752        rs58292855      A       G       .       PASS    AA=A;DP=145     GT:GQ:DP        0|0:71:23       1|0:100:30      0|1:100:53
+4      173982048       .       C       T       .       PASS    AA=C;DP=114     GT:GQ:DP        0|0:71:23       1|0:100:30      0|1:100:59
+2      116251556       rs2421339       T       C       .       PASS    AA=N;DP=115     GT:GQ:DP        0|0:71:23       1|0:100:30      0|1:100:61
+8      10062612        rs17151235      T       C       .       PASS    AA=T;DP=111     GT:GQ:DP        0|0:71:23       1|0:100:30      0|1:100:63
+13     57576052        rs7324018       T       A       .       PASS    AA=T;DP=122     GT:GQ:DP        0|0:71:23       1|0:100:30      0|1:100:69
+6      39015050        rs9380810       C       G       .       PASS    AA=G;DP=121     GT:GQ:DP        0|0:71:23       1|0:100:31      0|1:100:62
+6      117708444       rs7752773       T       C       .       PASS    AA=T;DP=121     GT:GQ:DP        0|0:71:23       1|0:100:31      0|1:100:64
+2      227941920       .       G       A       .       PASS    AA=G;DP=127     GT:GQ:DP        0|0:71:23       1|0:100:31      0|1:100:80
+2      139333003       rs16841327      C       T       .       PASS    AA=C;DP=143     GT:GQ:DP        0|0:71:23       1|0:100:32      0|1:100:89
+5      125075955       rs1873482       G       C       .       PASS    AA=G;DP=141     GT:GQ:DP        0|0:71:23       1|0:100:33      0|1:100:43
+17     19405783        rs8065082       C       T       .       PASS    AA=C;DP=106     GT:GQ:DP        0|0:71:23       1|0:100:33      0|1:100:49
+1      215079674       rs12083036      T       A       .       PASS    AA=T;DP=120     GT:GQ:DP        0|0:71:23       1|0:100:33      0|1:100:62
+5      97319215        rs12658317      G       C       .       PASS    AA=C;DP=125     GT:GQ:DP        0|0:71:23       1|0:100:33      0|1:100:71
+7      8967961 .       G       A       .       PASS    AA=G;DP=131     GT:GQ:DP        0|0:71:23       1|0:100:33      0|1:100:79
+6      128676927       rs2027311       C       T       .       PASS    AA=C;DP=127     GT:GQ:DP        0|0:71:23       1|0:100:34      0|1:100:72
+8      92682287        rs58888435      T       G       .       PASS    AA=T;DP=141     GT:GQ:DP        0|0:71:23       1|0:100:35      0|1:100:38
+4      88530824        rs28415220      G       C       .       PASS    AA=G;DP=130     GT:GQ:DP        0|0:71:23       1|0:100:38      0|1:100:72
+14     99100726        rs4900434       G       C       .       PASS    AA=C;DP=88      GT:GQ:DP        0|0:71:23       1|0:11:5        0|1:100:48
+9      139482192       .       T       A       .       PASS    AA=T;DP=83      GT:GQ:DP        0|0:71:23       1|0:12:13       0|1:100:34
+13     35624387        rs7333872       C       T       .       PASS    AA=C;DP=96      GT:GQ:DP        0|0:71:23       1|0:21:13       0|1:100:58
+19     3194227 .       T       A       .       PASS    AA=N;DP=97      GT:GQ:DP        0|0:71:23       1|0:32:14       0|1:100:58
+10     60650609        rs12245220      A       G       .       PASS    AA=A;DP=83      GT:GQ:DP        0|0:71:23       1|0:39:14       0|1:100:46
+7      12308452        rs11980307      T       C       .       PASS    AA=T;DP=85      GT:GQ:DP        0|0:71:23       1|0:39:14       0|1:100:47
+11     94710454        rs56772629      C       T       .       PASS    AA=C;DP=77      GT:GQ:DP        0|0:71:23       1|0:44:11       0|1:100:35
+2      19181973        rs11096582      G       A       .       PASS    AA=G;DP=91      GT:GQ:DP        0|0:71:23       1|0:44:12       0|1:100:55
+6      154564449       rs9397181       G       A       .       PASS    AA=G;DP=82      GT:GQ:DP        0|0:71:23       1|0:48:12       0|1:100:47
+16     85148437        rs60460012      C       G       .       PASS    AA=C;DP=91      GT:GQ:DP        0|0:71:23       1|0:51:8        0|1:100:59
+4      65975408        rs58930111      C       T       .       PASS    AA=c;DP=75      GT:GQ:DP        0|0:71:23       1|0:55:16       0|1:100:34
+17     37984351        rs4793244       G       A       .       PASS    AA=G;DP=110     GT:GQ:DP        0|0:71:23       1|0:55:25       0|1:100:62
+10     124724406       rs60796564      G       A       .       PASS    AA=g;DP=104     GT:GQ:DP        0|0:71:23       1|0:56:18       0|1:100:65
+12     77638415        .       C       T       .       PASS    AA=C;DP=89      GT:GQ:DP        0|0:71:23       1|0:57:16       0|1:100:48
+7      138586882       rs58608358      C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        0|0:71:23       1|0:60:19       0|1:100:69
+4      29466525        rs61206171      A       G       .       PASS    AA=A;DP=91      GT:GQ:DP        0|0:71:23       1|0:60:21       0|1:100:48
+14     57038270        rs8005987       A       G       .       PASS    AA=G;DP=113     GT:GQ:DP        0|0:71:23       1|0:61:25       0|1:100:68
+1      54959755        rs3820105       C       G       .       PASS    AA=C;DP=94;HM2  GT:GQ:DP        0|0:71:23       1|0:62:13       0|1:100:52
+2      114672717       .       T       A       .       PASS    AA=T;DP=108     GT:GQ:DP        0|0:71:23       1|0:62:23       0|1:100:63
+1      213888562       rs41315587      C       T       .       PASS    AA=T;DP=103     GT:GQ:DP        0|0:71:23       1|0:67:12       0|1:100:69
+13     64472212        rs9540307       G       C       .       PASS    AA=G;DP=87      GT:GQ:DP        0|0:71:23       1|0:67:17       0|1:100:48
+7      86102191        .       G       A       .       PASS    AA=G;DP=134     GT:GQ:DP        0|0:71:23       1|0:68:28       0|1:100:42
+2      26872863        rs11686707      C       T       .       PASS    AA=C;DP=93      GT:GQ:DP        0|0:71:23       1|0:69:10       0|1:100:60
+8      59012689        rs16922824      G       A       .       PASS    AA=G;DP=81      GT:GQ:DP        0|0:71:23       1|0:69:11       0|1:100:45
+10     120870986       rs12355534      G       A       .       PASS    AA=G;DP=120     GT:GQ:DP        0|0:71:23       1|0:69:18       0|1:100:84
+1      79742007        rs7520951       T       C       .       PASS    AA=T;DP=106;HM2 GT:GQ:DP        0|0:71:23       1|0:70:16       0|1:100:67
+9      73609537        .       C       T       .       PASS    AA=c;DP=120     GT:GQ:DP        0|0:71:23       1|0:72:17       0|1:100:81
+10     134271792       .       G       A       .       PASS    AA=g;DP=100     GT:GQ:DP        0|0:71:23       1|0:74:16       0|1:100:52
+1      167817371       rs57861658      G       A       .       PASS    AA=g;DP=97      GT:GQ:DP        0|0:71:23       1|0:74:16       0|1:100:61
+1      211883934       rs12144639      G       A       .       PASS    AA=A;DP=91;HM2;HM3      GT:GQ:DP        0|0:71:23       1|0:78:15       0|1:100:53
+3      156878288       .       C       T       .       PASS    AA=C;DP=86      GT:GQ:DP        0|0:71:23       1|0:79:20       0|1:100:31
+5      82093404        .       T       C       .       PASS    AA=T;DP=124     GT:GQ:DP        0|0:71:23       1|0:81:18       0|1:100:80
+2      234430992       rs686007        A       G       .       PASS    AA=A;DP=90      GT:GQ:DP        0|0:71:23       1|0:82:18       0|1:100:50
+13     42783324        .       G       A       .       PASS    AA=G;DP=104     GT:GQ:DP        0|0:71:23       1|0:82:19       0|1:100:60
+9      104352310       rs2417378       T       C       .       PASS    AA=T;DP=85      GT:GQ:DP        0|0:71:23       1|0:83:17       0|1:100:48
+11     4484871 rs2709189       C       T       .       PASS    AA=N;DP=109     GT:GQ:DP        0|0:71:23       1|0:84:19       0|1:100:70
+3      188635474       rs11919280      C       G       .       PASS    AA=G;DP=112     GT:GQ:DP        0|0:71:23       1|0:85:17       0|1:100:74
+1      215234852       .       G       T       .       PASS    AA=G;DP=111     GT:GQ:DP        0|0:71:23       1|0:85:23       0|1:100:64
+6      68959301        .       G       A       .       PASS    AA=G;DP=85      GT:GQ:DP        0|0:71:23       1|0:86:19       0|1:100:42
+8      69696327        .       G       A       .       PASS    AA=G;DP=87      GT:GQ:DP        0|0:71:23       1|0:87:17       0|1:100:46
+8      75928772        rs2732016       G       T       .       PASS    AA=T;DP=69      GT:GQ:DP        0|0:71:23       1|0:87:19       0|1:100:20
+2      66307982        rs11896357      C       T       .       PASS    AA=C;DP=132     GT:GQ:DP        0|0:71:23       1|0:88:32       0|1:100:76
+19     8228722 rs57237814      G       A       .       PASS    AA=C;DP=97      GT:GQ:DP        0|0:71:23       1|0:89:18       0|1:100:45
+10     34149941        rs2812629       G       A       .       PASS    AA=A;DP=113     GT:GQ:DP        0|0:71:23       1|0:89:23       0|1:100:30
+13     28357830        .       G       A       .       PASS    AA=g;DP=95      GT:GQ:DP        0|0:71:23       1|0:91:17       0|1:100:56
+6      123955693       rs1321880       C       A       .       PASS    AA=A;DP=97      GT:GQ:DP        0|0:71:23       1|0:91:22       0|1:100:51
+5      4675701 rs7722376       A       G       .       PASS    AA=A;DP=96      GT:GQ:DP        0|0:71:23       1|0:91:9        0|1:100:63
+7      13975597        .       A       G       .       PASS    AA=A;DP=88      GT:GQ:DP        0|0:71:23       1|0:93:14       0|1:100:50
+10     16415987        .       C       T       .       PASS    AA=C;DP=107     GT:GQ:DP        0|0:71:23       1|0:93:17       0|1:100:67
+7      139541258       rs17277818      A       T       .       PASS    AA=A;DP=74      GT:GQ:DP        0|0:71:23       1|0:94:13       0|1:100:38
+9      72926463        rs4620343       C       T       .       PASS    AA=C;DP=88      GT:GQ:DP        0|0:71:23       1|0:94:14       0|1:100:51
+10     26392075        rs12252534      A       G       .       PASS    AA=A;DP=84      GT:GQ:DP        0|0:71:23       1|0:95:13       0|1:100:37
+7      111642057       rs58583565      G       A       .       PASS    AA=G;DP=104     GT:GQ:DP        0|0:71:23       1|0:98:16       0|1:100:61
+15     76570254        .       A       G       .       PASS    AA=A;DP=116     GT:GQ:DP        0|0:71:23       1|0:98:17       0|1:100:73
+20     20642209        rs59673231      C       T       .       PASS    AA=C;DP=101     GT:GQ:DP        0|0:71:23       1|0:98:21       0|1:100:57
+20     14052715        .       T       C       .       PASS    AA=T;DP=87      GT:GQ:DP        0|0:71:23       1|0:9:12        0|1:100:51
+6      116083570       rs60316033      T       C       .       PASS    AA=T;DP=82      GT:GQ:DP        0|0:71:24       0|1:100:12      0|0:100:46
+8      2635171 .       G       C       .       PASS    AA=G;DP=115     GT:GQ:DP        0|0:71:24       0|1:100:12      0|0:100:81
+5      113343916       .       C       T       .       PASS    AA=c;DP=76      GT:GQ:DP        0|0:71:24       0|1:100:12      0|0:84:28
+5      26166120        .       C       A       .       PASS    AA=C;DP=82      GT:GQ:DP        0|0:71:24       0|1:100:14      0|0:100:46
+22     48171344        rs1023460       C       T       .       PASS    AA=c;DP=94      GT:GQ:DP        0|0:71:24       0|1:100:16      0|0:100:47
+11     68516266        .       C       T       .       PASS    AA=C;DP=119     GT:GQ:DP        0|0:71:24       0|1:100:16      0|0:100:80
+8      40391844        rs28668178      A       G       .       PASS    AA=A;DP=111     GT:GQ:DP        0|0:71:24       0|1:100:17      0|0:100:75
+20     36702002        .       G       A       .       PASS    AA=G;DP=131     GT:GQ:DP        0|0:71:24       0|1:100:18      0|0:100:89
+2      228105545       .       A       G       .       PASS    AA=A;DP=100     GT:GQ:DP        0|0:71:24       0|1:100:20      0|0:100:56
+2      237177686       .       G       C       .       PASS    AA=G;DP=119     GT:GQ:DP        0|0:71:24       0|1:100:21      0|0:100:75
+2      79845837        rs7569286       A       G       .       PASS    AA=A;DP=111     GT:GQ:DP        0|0:71:24       0|1:100:22      0|0:100:66
+19     33644547        rs62108075      A       G       .       PASS    AA=A;DP=121     GT:GQ:DP        0|0:71:24       0|1:100:25      0|0:100:73
+3      5516436 .       A       G       .       PASS    AA=A;DP=141     GT:GQ:DP        0|0:71:24       0|1:100:34      0|0:100:86
+2      144227545       rs34999746      G       T       .       PASS    AA=G;DP=150     GT:GQ:DP        0|0:71:24       0|1:100:36      0|0:100:42
+16     27613822        rs9938748       C       T       .       PASS    AA=C;DP=118     GT:GQ:DP        0|0:71:24       1|0:100:12      0|1:100:83
+16     7022046 rs7196887       T       C       .       PASS    AA=C;DP=85      GT:GQ:DP        0|0:71:24       1|0:100:15      0|1:100:45
+13     103563590       rs7317590       C       A       .       PASS    AA=C;DP=91      GT:GQ:DP        0|0:71:24       1|0:100:15      0|1:100:52
+12     59019183        rs10877417      C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        0|0:71:24       1|0:100:15      0|1:100:66
+2      22978513        .       G       A       .       PASS    AA=G;DP=104     GT:GQ:DP        0|0:71:24       1|0:100:16      0|1:100:63
+2      230211085       .       A       G       .       PASS    AA=A;DP=95      GT:GQ:DP        0|0:71:24       1|0:100:17      0|1:100:51
+5      41458137        rs28469040      T       C       .       PASS    AA=T;DP=111     GT:GQ:DP        0|0:71:24       1|0:100:17      0|1:100:72
+7      41443087        .       G       T       .       PASS    AA=G;DP=115     GT:GQ:DP        0|0:71:24       1|0:100:17      0|1:100:73
+8      137615631       rs2577037       A       G       .       PASS    AA=a;DP=90      GT:GQ:DP        0|0:71:24       1|0:100:18      0|1:100:50
+3      192394547       rs6776577       T       C       .       PASS    AA=C;DP=96      GT:GQ:DP        0|0:71:24       1|0:100:18      0|1:100:56
+10     24034618        rs7082042       A       G       .       PASS    AA=G;DP=88      GT:GQ:DP        0|0:71:24       1|0:100:19      0|1:100:45
+5      107473748       rs40063 T       C       .       PASS    AA=T;DP=117     GT:GQ:DP        0|0:71:24       1|0:100:19      0|1:100:72
+19     62535732        rs8099984       T       C       .       PASS    AA=T;DP=89      GT:GQ:DP        0|0:71:24       1|0:100:20      0|1:100:47
+6      123740741       rs6901953       T       C       .       PASS    AA=T;DP=96      GT:GQ:DP        0|0:71:24       1|0:100:20      0|1:100:50
+18     23218509        .       A       G       .       PASS    AA=A;DP=98      GT:GQ:DP        0|0:71:24       1|0:100:20      0|1:100:56
+22     47125656        .       C       T       .       PASS    AA=C;DP=133     GT:GQ:DP        0|0:71:24       1|0:100:22      0|1:100:39
+4      143558672       rs17658809      C       T       .       PASS    AA=T;DP=97      GT:GQ:DP        0|0:71:24       1|0:100:22      0|1:100:53
+11     100765005       .       G       A       .       PASS    AA=G;DP=101     GT:GQ:DP        0|0:71:24       1|0:100:22      0|1:100:54
+21     29962076        .       G       A       .       PASS    AA=G;DP=104     GT:GQ:DP        0|0:71:24       1|0:100:22      0|1:100:60
+11     48622173        .       C       A       .       PASS    AA=.;DP=109     GT:GQ:DP        0|0:71:24       1|0:100:22      0|1:100:64
+2      29547982        .       A       C       .       PASS    AA=A;DP=115     GT:GQ:DP        0|0:71:24       1|0:100:22      0|1:100:70
+18     23996324        rs17536848      C       T       .       PASS    AA=C;DP=119     GT:GQ:DP        0|0:71:24       1|0:100:23      0|1:100:74
+2      212506219       rs56970655      C       A       .       PASS    AA=C;DP=119     GT:GQ:DP        0|0:71:24       1|0:100:24      0|1:100:71
+1      221427612       .       A       G       .       PASS    AA=A;DP=133     GT:GQ:DP        0|0:71:24       1|0:100:24      0|1:100:84
+2      123688193       rs17243457      T       C       .       PASS    AA=N;DP=107     GT:GQ:DP        0|0:71:24       1|0:100:25      0|1:100:58
+2      1992345 rs57124923      C       T       .       PASS    AA=C;DP=126     GT:GQ:DP        0|0:71:24       1|0:100:25      0|1:100:78
+3      152388329       rs6775269       A       G       .       PASS    AA=A;DP=101     GT:GQ:DP        0|0:71:24       1|0:100:26      0|1:100:52
+1      65853943        rs11208688      T       C       .       PASS    AA=T;DP=105     GT:GQ:DP        0|0:71:24       1|0:100:26      0|1:100:56
+8      8999938 rs4840392       A       G       .       PASS    AA=A;DP=133     GT:GQ:DP        0|0:71:24       1|0:100:27      0|1:100:40
+8      27725284        rs4732758       T       A       .       PASS    AA=A;DP=108     GT:GQ:DP        0|0:71:24       1|0:100:27      0|1:100:57
+4      59555816        rs11935803      G       A       .       PASS    AA=G;DP=119     GT:GQ:DP        0|0:71:24       1|0:100:27      0|1:100:71
+15     50975197        rs61671222      A       G       .       PASS    AA=A;DP=123     GT:GQ:DP        0|0:71:24       1|0:100:28      0|1:100:54
+14     57203303        rs17093537      T       C       .       PASS    AA=C;DP=116     GT:GQ:DP        0|0:71:24       1|0:100:28      0|1:100:63
+6      102025473       .       T       C       .       PASS    AA=T;DP=121     GT:GQ:DP        0|0:71:24       1|0:100:28      0|1:100:69
+8      138901474       rs60952345      C       T       .       PASS    AA=c;DP=104     GT:GQ:DP        0|0:71:24       1|0:100:29      0|1:100:51
+2      151746934       rs17796622      G       A       .       PASS    AA=G;DP=120     GT:GQ:DP        0|0:71:24       1|0:100:31      0|1:100:67
+4      86700867        rs9307005       G       C       .       PASS    AA=C;DP=126     GT:GQ:DP        0|0:71:24       1|0:100:31      0|1:100:71
+2      134044189       rs6740185       T       C       .       PASS    AA=T;DP=134     GT:GQ:DP        0|0:71:24       1|0:100:32      0|1:100:76
+2      123241481       rs12329076      A       G       .       PASS    AA=a;DP=133     GT:GQ:DP        0|0:71:24       1|0:100:33      0|1:100:77
+2      99879678        .       C       T       .       PASS    AA=C;DP=101     GT:GQ:DP        0|0:71:24       1|0:37:16       0|1:100:60
+2      130186312       .       C       T       .       PASS    AA=c;DP=111     GT:GQ:DP        0|0:71:24       1|0:45:17       0|1:100:53
+7      157485883       rs10281741      G       C       .       PASS    AA=C;DP=73      GT:GQ:DP        0|0:71:24       1|0:52:11       0|1:100:26
+4      162318353       .       A       G       .       PASS    AA=a;DP=89      GT:GQ:DP        0|0:71:24       1|0:57:17       0|1:100:48
+13     23574978        rs9511056       G       C       .       PASS    AA=C;DP=103     GT:GQ:DP        0|0:71:24       1|0:59:14       0|1:100:65
+2      115543782       rs7593500       G       A       .       PASS    AA=A;DP=121     GT:GQ:DP        0|0:71:24       1|0:59:18       0|1:100:71
+20     19884196        rs60719304      G       A       .       PASS    AA=G;DP=100     GT:GQ:DP        0|0:71:24       1|0:60:19       0|1:100:58
+13     87522038        .       G       T       .       PASS    AA=G;DP=111     GT:GQ:DP        0|0:71:24       1|0:67:21       0|1:100:67
+6      72904488        rs2463700       G       A       .       PASS    AA=G;DP=112     GT:GQ:DP        0|0:71:24       1|0:68:21       0|1:100:68
+17     68962830        rs56252032      C       T       .       PASS    AA=N;DP=121     GT:GQ:DP        0|0:71:24       1|0:69:21       0|1:100:76
+14     57252872        rs7155981       G       A       .       PASS    AA=G;DP=101     GT:GQ:DP        0|0:71:24       1|0:71:17       0|1:100:59
+4      166316941       .       G       A       .       PASS    AA=A;DP=80      GT:GQ:DP        0|0:71:24       1|0:72:15       0|1:100:41
+13     85161343        rs1953676       G       A       .       PASS    AA=g;DP=85      GT:GQ:DP        0|0:71:24       1|0:76:18       0|1:9:43
+X      56714503        rs4826320       C       T       .       PASS    AA=N;DP=123     GT:GQ:DP        0|0:71:24       1|0:80:16       0|1:100:50
+7      78394149        rs1642884       T       C       .       PASS    AA=T;DP=107     GT:GQ:DP        0|0:71:24       1|0:81:24       0|1:100:60
+13     66631913        .       C       G       .       PASS    AA=C;DP=98      GT:GQ:DP        0|0:71:24       1|0:83:16       0|1:100:62
+22     18515211        rs7290959       T       C       .       PASS    AA=C;DP=74      GT:GQ:DP        0|0:71:24       1|0:85:7        0|1:100:36
+15     98626552        rs11854216      C       T       .       PASS    AA=C;DP=92      GT:GQ:DP        0|0:71:24       1|0:86:13       0|1:100:54
+5      167012099       rs2061446       C       T       .       PASS    AA=C;DP=105     GT:GQ:DP        0|0:71:24       1|0:87:15       0|1:100:68
+2      166777836       .       A       T       .       PASS    AA=A;DP=89      GT:GQ:DP        0|0:71:24       1|0:95:12       0|1:100:40
+4      90459814        .       C       T       .       PASS    AA=C;DP=102     GT:GQ:DP        0|0:71:25       0|1:100:15      0|0:100:57
+9      16438687        .       C       T       .       PASS    AA=T;DP=128     GT:GQ:DP        0|0:71:25       0|1:100:26      0|0:100:78
+17     5983719 rs7217671       T       C       .       PASS    AA=t;DP=139     GT:GQ:DP        0|0:71:25       0|1:100:32      0|0:100:39
+11     34444569        rs16925606      T       A       .       PASS    AA=T;DP=88      GT:GQ:DP        0|0:71:25       1|0:100:13      0|1:100:50
+9      11847199        .       G       A       .       PASS    AA=g;DP=93      GT:GQ:DP        0|0:71:25       1|0:100:15      0|1:100:47
+1      183908020       rs16824344      G       C       .       PASS    AA=C;DP=117;HM2 GT:GQ:DP        0|0:71:25       1|0:100:16      0|1:100:75
+17     12291129        rs12935878      C       A       .       PASS    AA=C;DP=78      GT:GQ:DP        0|0:71:25       1|0:100:17      0|1:100:28
+2      176892332       .       G       A       .       PASS    AA=G;DP=109     GT:GQ:DP        0|0:71:25       1|0:100:19      0|1:100:62
+1      238299115       .       G       A       .       PASS    AA=g;DP=95      GT:GQ:DP        0|0:71:25       1|0:100:21      0|1:100:50
+11     11300270        .       A       G       .       PASS    AA=A;DP=106     GT:GQ:DP        0|0:71:25       1|0:100:21      0|1:100:62
+7      119323428       .       A       C       .       PASS    AA=.;DP=97      GT:GQ:DP        0|0:71:25       1|0:100:22      0|1:100:35
+2      117905359       .       G       A       .       PASS    AA=G;DP=121     GT:GQ:DP        0|0:71:25       1|0:100:25      0|1:100:69
+2      154150964       rs1940252       T       C       .       PASS    AA=T;DP=99      GT:GQ:DP        0|0:71:25       1|0:100:26      0|1:100:48
+13     64399274        rs9598861       G       C       .       PASS    AA=G;DP=113     GT:GQ:DP        0|0:71:25       1|0:100:28      0|1:100:61
+3      157856780       rs6790457       A       G       .       PASS    AA=G;DP=97      GT:GQ:DP        0|0:71:25       1|0:44:17       0|1:100:54
+20     4171982 rs2027269       T       G       .       PASS    AA=T;DP=109     GT:GQ:DP        0|0:71:25       1|0:65:12       0|1:100:68
+6      36992505        .       A       C       .       PASS    AA=A;DP=92      GT:GQ:DP        0|0:71:25       1|0:72:14       0|1:100:54
+9      27983965        rs59911068      C       T       .       PASS    AA=C;DP=119     GT:GQ:DP        0|0:71:25       1|0:75:15       0|1:100:74
+22     29255492        rs7287003       G       C       .       PASS    AA=G;DP=99      GT:GQ:DP        0|0:71:25       1|0:82:14       0|1:100:62
+5      66359831        rs6866391       A       G       .       PASS    AA=A;DP=153     GT:GQ:DP        0|0:71:26       0|1:100:25      0|0:100:58
+4      77390752        rs1372408       G       A       .       PASS    AA=A;DP=100     GT:GQ:DP        0|0:71:26       1|0:100:21      0|1:100:54
+6      163519380       rs10806771      T       A       .       PASS    AA=T;DP=139     GT:GQ:DP        0|0:71:26       1|0:75:18       0|1:100:93
+5      91396640        rs10072695      G       T       .       PASS    AA=G;DP=114     GT:GQ:DP        0|0:71:27       0|1:100:25      0|0:100:51
+5      117603962       rs11241451      G       A       .       PASS    AA=g;DP=132     GT:GQ:DP        0|0:71:27       1|0:64:20       0|1:100:45
+2      127901964       rs2069930       G       A       .       PASS    AA=G;DP=112     GT:GQ:DP        0|0:71:28       0|1:100:20      0|0:100:53
+9      9876485 rs10123527      T       C       .       PASS    AA=T;DP=116     GT:GQ:DP        0|0:71:28       0|1:100:20      0|0:100:68
+13     112249259       .       A       G       .       PASS    AA=N;DP=134     GT:GQ:DP        0|0:71:28       0|1:100:25      0|0:100:84
+13     50742136        .       A       G       .       PASS    AA=A;DP=118     GT:GQ:DP        0|0:71:29       0|1:100:16      0|0:100:74
+9      75746637        rs10119976      T       C       .       PASS    AA=C;DP=114     GT:GQ:DP        0|0:71:29       0|1:100:22      0|0:100:65
+11     70699195        .       C       T       .       PASS    AA=C;DP=99      GT:GQ:DP        0|0:71:29       1|0:71:15       0|1:100:45
+14     80621187        .       T       C       .       PASS    AA=T;DP=135     GT:GQ:DP        0|0:71:30       0|1:100:25      0|0:100:81
+5      133206979       rs2457174       C       T       .       PASS    AA=C;DP=127     GT:GQ:DP        0|0:71:30       1|0:100:19      0|1:100:77
+14     84604558        rs61979835      C       T       .       PASS    AA=T;DP=116     GT:GQ:DP        0|0:71:30       1|0:100:22      0|1:100:60
+2      239021716       rs62196716      C       G       .       PASS    AA=T;DP=125     GT:GQ:DP        0|0:71:30       1|0:47:16       0|1:100:79
+10     127373471       .       C       A       .       PASS    AA=C;DP=116     GT:GQ:DP        0|0:71:30       1|0:49:14       0|1:100:72
+8      78158048        .       T       C       .       PASS    AA=T;DP=102     GT:GQ:DP        0|0:71:30       1|0:75:12       0|1:100:61
+5      14853333        rs258222        C       T       .       PASS    AA=T;DP=151     GT:GQ:DP        0|0:71:30       1|0:95:26       0|1:100:90
+16     82221704        .       G       A       .       PASS    AA=G;DP=130     GT:GQ:DP        0|0:71:31       1|0:100:26      0|1:100:72
+15     64841040        rs7180242       C       T       .       PASS    AA=C;DP=102     GT:GQ:DP        0|0:71:31       1|1:52:19       0|1:100:55
+4      5244333 .       G       A       .       PASS    AA=G;DP=105     GT:GQ:DP        0|0:71:32       0|1:100:18      0|0:100:48
+16     5356052 rs11865528      T       C       .       PASS    AA=C;DP=124     GT:GQ:DP        0|0:71:32       1|0:100:22      0|1:100:70
+20     60188708        .       T       C       .       PASS    AA=T;DP=100     GT:GQ:DP        0|0:71:32       1|0:43:12       0|1:100:57
+20     10877117        rs6040251       G       A       .       PASS    AA=G;DP=142     GT:GQ:DP        0|0:71:32       1|1:64:25       0|1:100:90
+11     5186878 rs7935470       A       C       .       PASS    AA=C;DP=132     GT:GQ:DP        0|0:71:39       1|0:100:31      0|1:100:63
+22     48312277        rs134452        A       C       .       PASS    AA=A;DP=109     GT:GQ:DP        0|0:71:39       1|0:93:14       0|1:100:56
+1      44093893        .       A       T       .       PASS    AA=A;DP=90      GT:GQ:DP        0|0:72:24       1|1:11:15       0|1:100:40
+X      75698714        rs5982180       G       A       .       PASS    AA=.;DP=101     GT:GQ:DP        0|0:72:24       1|1:12:23       0|1:100:35
+2      84491685        .       C       T       .       PASS    AA=C;DP=84      GT:GQ:DP        0|0:72:24       1|1:13:14       0|1:100:48
+12     4686944 rs11063310      T       C       .       PASS    AA=t;DP=102     GT:GQ:DP        0|0:72:24       1|1:19:11       0|1:100:69
+2      31269821        rs12619774      C       G       .       PASS    AA=G;DP=90      GT:GQ:DP        0|0:72:24       1|1:19:8        0|1:100:52
+9      329489  .       T       C       .       PASS    AA=T;DP=83      GT:GQ:DP        0|0:72:24       1|1:24:13       0|1:100:45
+3      146053110       .       C       T       .       PASS    AA=C;DP=93      GT:GQ:DP        0|0:72:24       1|1:25:12       0|1:100:57
+3      30972505        .       A       C       .       PASS    AA=A;DP=74      GT:GQ:DP        0|0:72:24       1|1:28:11       0|1:100:27
+11     34251375        .       T       C       .       PASS    AA=T;DP=121     GT:GQ:DP        0|0:72:24       1|1:33:19       0|1:100:80
+19     38758732        rs12979271      A       G       .       PASS    AA=a;DP=106     GT:GQ:DP        0|0:72:24       1|1:34:14       0|1:100:68
+2      112376895       rs11123028      C       G       .       PASS    AA=C;DP=95      GT:GQ:DP        0|0:72:24       1|1:36:19       0|1:100:52
+1      242392441       rs56181452      G       A       .       PASS    AA=N;DP=116     GT:GQ:DP        0|0:72:24       1|1:36:19       0|1:100:76
+4      72679357        rs6848396       A       C       .       PASS    AA=G;DP=124     GT:GQ:DP        0|0:72:24       1|1:37:14       0|1:100:39
+6      113277438       rs9481288       A       G       .       PASS    AA=A;DP=93      GT:GQ:DP        0|0:72:24       1|1:40:15       0|1:100:53
+3      97457540        .       A       T       .       PASS    AA=A;DP=96      GT:GQ:DP        0|0:72:24       1|1:40:15       0|1:100:58
+5      36804470        rs13435985      G       A       .       PASS    AA=G;DP=92      GT:GQ:DP        0|0:72:24       1|1:40:16       0|1:100:52
+12     92894685        rs199340        T       G       .       PASS    AA=G;DP=152     GT:GQ:DP        0|0:72:24       1|1:40:24       0|1:100:58
+16     54113962        rs9922328       A       G       .       PASS    AA=A;DP=86      GT:GQ:DP        0|0:72:24       1|1:43:16       0|1:100:43
+20     6210992 rs6054063       C       A       .       PASS    AA=C;DP=94      GT:GQ:DP        0|0:72:24       1|1:43:16       0|1:100:54
+19     44282795        rs8110736       G       A       .       PASS    AA=G;DP=102     GT:GQ:DP        0|0:72:24       1|1:43:19       0|1:100:59
+7      135399704       rs7800303       T       G       .       PASS    AA=T;DP=129     GT:GQ:DP        0|0:72:24       1|1:45:28       0|1:100:81
+2      199181164       rs13389964      T       C       .       PASS    AA=T;DP=87      GT:GQ:DP        0|0:72:24       1|1:46:18       0|1:100:41
+1      35072732        rs12067998      G       C       .       PASS    AA=g;DP=131;HM2 GT:GQ:DP        0|0:72:24       1|1:52:20       0|1:100:88
+X      275744  rs28813147      C       T       .       PASS    AA=.;DP=87      GT:GQ:DP        0|0:72:24       1|1:55:20       0|1:100:41
+4      118913590       rs4331838       A       C       .       PASS    AA=C;DP=126     GT:GQ:DP        0|0:72:24       1|1:55:30       0|1:100:74
+4      15900092        rs1558451       G       A       .       PASS    AA=G;DP=127     GT:GQ:DP        0|0:72:24       1|1:57:28       0|1:100:78
+14     96900534        rs7158520       T       C       .       PASS    AA=T;DP=116     GT:GQ:DP        0|0:72:24       1|1:58:21       0|1:100:32
+20     54206930        rs7262436       G       A       .       PASS    AA=G;DP=103     GT:GQ:DP        0|0:72:24       1|1:58:21       0|1:100:58
+16     59244488        rs12709063      A       G       .       PASS    AA=A;DP=111     GT:GQ:DP        0|0:72:24       1|1:58:22       0|1:100:65
+6      40035576        .       T       C       .       PASS    AA=T;DP=86      GT:GQ:DP        0|0:72:24       1|1:58:23       0|1:100:39
+1      57056310        rs11585758      G       A       .       PASS    AA=G;DP=118     GT:GQ:DP        0|0:72:24       1|1:58:23       0|1:100:71
+X      48344695        rs235845        G       T       .       PASS    AA=G;DP=131     GT:GQ:DP        0|0:72:24       1|1:5:15        0|1:100:52
+13     53077427        rs7339412       A       T       .       PASS    AA=A;DP=109     GT:GQ:DP        0|0:72:24       1|1:61:22       0|1:100:64
+2      233707830       rs56265336      G       A       .       PASS    AA=G;DP=113     GT:GQ:DP        0|0:72:24       1|1:61:22       0|1:100:65
+3      137066778       rs6769033       G       A       .       PASS    AA=G;DP=111     GT:GQ:DP        0|0:72:24       1|1:61:22       0|1:100:66
+15     87860913        rs8042109       G       T       .       PASS    AA=T;DP=91      GT:GQ:DP        0|0:72:24       1|1:61:23       0|1:100:45
+4      185331356       rs6810887       G       A       .       PASS    AA=A;DP=103     GT:GQ:DP        0|0:72:24       1|1:61:25       0|1:100:53
+8      14087633        rs1904078       G       T       .       PASS    AA=G;DP=77      GT:GQ:DP        0|0:72:24       1|1:64:23       0|1:100:23
+11     74012810        rs10899019      A       G       .       PASS    AA=A;DP=93      GT:GQ:DP        0|0:72:24       1|1:64:24       0|1:100:47
+6      152597951       rs12110523      T       C       .       PASS    AA=T;DP=135     GT:GQ:DP        0|0:72:24       1|1:64:24       0|1:100:87
+4      5107546 .       A       G       .       PASS    AA=A;DP=122     GT:GQ:DP        0|0:72:24       1|1:67:26       0|1:100:71
+X      70605287        .       C       G       .       PASS    AA=N;DP=92      GT:GQ:DP        0|0:72:24       1|1:6:13        0|1:100:40
+18     27211723        .       G       A       .       PASS    AA=A;DP=137     GT:GQ:DP        0|0:72:24       1|1:73:26       0|1:100:48
+2      74208820        rs828841        T       C       .       PASS    AA=T;DP=126     GT:GQ:DP        0|0:72:24       1|1:73:27       0|1:100:74
+X      9607154 rs2732880       T       C       .       PASS    AA=t;DP=132     GT:GQ:DP        0|0:72:24       1|1:76:27       0|1:100:45
+8      107962653       rs2981256       A       G       .       PASS    AA=G;DP=96      GT:GQ:DP        0|0:72:24       1|1:76:28       0|1:100:43
+7      37336433        rs59472144      T       A       .       PASS    AA=T;DP=112     GT:GQ:DP        0|0:72:24       1|1:79:28       0|1:100:58
+3      1383344 rs13063912      C       T       .       PASS    AA=C;DP=141     GT:GQ:DP        0|0:72:24       1|1:79:29       0|1:100:90
+6      48263655        rs1396039       G       C       .       PASS    AA=G;DP=121     GT:GQ:DP        0|0:72:24       1|1:85:31       0|1:100:64
+14     34071364        rs61981529      C       A       .       PASS    AA=C;DP=90      GT:GQ:DP        0|0:72:24       1|1:8:15        0|1:100:54
+1      186491328       rs12048979      C       T       .       PASS    AA=c;DP=119     GT:GQ:DP        0|0:72:24       1|1:91:32       0|1:100:63
+1      66600975        rs7546103       T       C       .       PASS    AA=T;DP=169;HM2;HM3     GT:GQ:DP        0|0:72:24       1|1:91:35       0|1:100:54
+4      176042338       .       C       G       .       PASS    AA=C;DP=108     GT:GQ:DP        0|0:72:25       0|1:100:24      0|0:100:60
+1      16243299        .       T       C       .       PASS    AA=.;DP=69      GT:GQ:DP        0|0:72:25       1|1:11:5        0|1:100:34
+21     37691815        rs2835712       A       C       .       PASS    AA=C;DP=116     GT:GQ:DP        0|0:72:25       1|1:12:20       0|1:100:71
+4      72947167        rs1356876       G       A       .       PASS    AA=G;DP=81      GT:GQ:DP        0|0:72:25       1|1:19:8        0|1:100:48
+3      17824951        rs6780341       A       G       .       PASS    AA=A;DP=121     GT:GQ:DP        0|0:72:25       1|1:30:20       0|1:100:32
+15     27464478        rs11072555      C       G       .       PASS    AA=C;DP=138     GT:GQ:DP        0|0:72:25       1|1:34:14       0|1:100:46
+7      131927918       rs1017288       C       T       .       PASS    AA=C;DP=107     GT:GQ:DP        0|0:72:25       1|1:37:15       0|1:100:65
+13     23668874        rs9507274       G       C       .       PASS    AA=C;DP=106     GT:GQ:DP        0|0:72:25       1|1:37:17       0|1:100:67
+9      109185202       rs1746817       A       G       .       PASS    AA=A;DP=125     GT:GQ:DP        0|0:72:25       1|1:42:22       0|1:100:77
+3      87677144        rs4858963       G       A       .       PASS    AA=G;DP=96      GT:GQ:DP        0|0:72:25       1|1:43:17       0|1:100:50
+11     129819067       rs58110678      C       G       .       PASS    AA=G;DP=100     GT:GQ:DP        0|0:72:25       1|1:43:17       0|1:100:57
+15     56870077        rs3985719       A       G       .       PASS    AA=A;DP=110     GT:GQ:DP        0|0:72:25       1|1:43:18       0|1:100:52
+19     34514569        rs2160717       C       T       .       PASS    AA=C;DP=104     GT:GQ:DP        0|0:72:25       1|1:46:17       0|1:100:61
+10     56091005        rs55883343      C       T       .       PASS    AA=T;DP=87      GT:GQ:DP        0|0:72:25       1|1:46:18       0|1:100:44
+3      100685065       rs1513310       C       T       .       PASS    AA=C;DP=96      GT:GQ:DP        0|0:72:25       1|1:49:18       0|1:100:53
+2      126745727       .       G       T       .       PASS    AA=G;DP=96      GT:GQ:DP        0|0:72:25       1|1:49:19       0|1:100:43
+7      125017095       .       C       T       .       PASS    AA=C;DP=89      GT:GQ:DP        0|0:72:25       1|1:58:21       0|1:100:44
+3      104508198       rs1994819       T       A       .       PASS    AA=A;DP=114     GT:GQ:DP        0|0:72:25       1|1:61:22       0|1:100:66
+3      110248920       rs2121808       C       G       .       PASS    AA=G;DP=106     GT:GQ:DP        0|0:72:25       1|1:61:24       0|1:100:59
+2      189552844       rs13425379      G       A       .       PASS    AA=G;DP=125     GT:GQ:DP        0|0:72:25       1|1:72:27       0|1:100:73
+3      76555274        rs4856030       C       G       .       PASS    AA=c;DP=139     GT:GQ:DP        0|0:72:25       1|1:81:35       0|1:100:81
+8      67127982        rs7846131       A       T       .       PASS    AA=T;DP=101     GT:GQ:DP        0|0:72:26       1|0:100:27      0|1:100:38
+11     96541668        rs17129877      A       G       .       PASS    AA=a;DP=99      GT:GQ:DP        0|0:72:26       1|1:40:15       0|1:100:57
+6      17517957        rs7762847       G       A       .       PASS    AA=A;DP=113     GT:GQ:DP        0|0:72:26       1|1:40:17       0|1:100:70
+7      96354007        rs16869160      T       C       .       PASS    AA=T;DP=102     GT:GQ:DP        0|0:72:26       1|1:49:18       0|1:100:59
+3      7904468 rs364649        G       C       .       PASS    AA=g;DP=133     GT:GQ:DP        0|0:72:26       1|1:70:26       0|1:100:79
+2      172658319       rs3098974       A       T       .       PASS    AA=T;DP=77      GT:GQ:DP        0|0:72:27       1|1:19:10       0|1:100:35
+4      161347287       rs17039330      G       T       .       PASS    AA=G;DP=91      GT:GQ:DP        0|0:72:28       1|0:100:23      0|1:100:31
+3      102765087       rs59790563      G       A       .       PASS    AA=G;DP=116     GT:GQ:DP        0|0:72:28       1|0:76:16       0|1:100:72
+5      85296399        rs2410710       G       A       .       PASS    AA=G;DP=113     GT:GQ:DP        0|0:72:29       0|1:100:20      0|0:100:67
+6      131239154       .       G       T       .       PASS    AA=G;DP=112     GT:GQ:DP        0|0:72:29       1|0:100:16      0|1:100:64
+10     108450482       rs11193014      T       C       .       PASS    AA=T;DP=136     GT:GQ:DP        0|0:72:29       1|0:100:26      0|1:100:78
+2      208839012       .       G       C       .       PASS    AA=G;DP=109     GT:GQ:DP        0|0:72:29       1|0:70:15       0|1:100:57
+4      147159806       .       A       G       .       PASS    AA=A;DP=122     GT:GQ:DP        0|0:72:29       1|1:28:26       0|1:100:28
+10     131250458       rs483959        T       C       .       PASS    AA=C;DP=141     GT:GQ:DP        0|0:72:29       1|1:64:25       0|1:100:36
+6      133869403       .       G       T       .       PASS    AA=G;DP=125     GT:GQ:DP        0|0:72:30       0|1:100:29      0|0:100:65
+6      164503331       rs62436561      C       G       .       PASS    AA=C;DP=140     GT:GQ:DP        0|0:72:30       0|1:100:34      0|0:100:80
+6      133221318       .       G       T       .       PASS    AA=G;DP=114     GT:GQ:DP        0|0:72:30       1|0:100:29      0|1:100:59
+19     5824700 rs60974710      A       G       .       PASS    AA=a;DP=102     GT:GQ:DP        0|0:72:30       1|0:77:12       0|1:100:57
+11     86253820        rs10501630      G       T       .       PASS    AA=G;DP=177     GT:GQ:DP        0|0:72:31       1|0:100:33      0|1:100:69
+1      180228066       rs61661711      C       A       .       PASS    AA=c;DP=129     GT:GQ:DP        0|0:72:31       1|0:92:29       0|1:100:70
+5      81839143        .       T       G       .       PASS    AA=T;DP=131     GT:GQ:DP        0|0:72:32       1|0:100:25      0|1:100:74
+18     1942510 rs13381738      C       A       .       PASS    AA=A;DP=119     GT:GQ:DP        0|0:72:32       1|1:36:29       0|1:100:61
+6      53918346        rs56979623      G       A       .       PASS    AA=G;DP=118     GT:GQ:DP        0|0:72:33       1|0:76:13       0|1:100:69
+8      55363088        rs16919962      A       G       .       PASS    AA=G;DP=129     GT:GQ:DP        0|0:72:34       0|1:100:14      0|0:100:85
+2      107944202       .       G       T       .       PASS    AA=G;DP=127     GT:GQ:DP        0|0:72:34       0|1:100:20      0|0:100:73
+1      200298931       rs10465590      C       T       .       PASS    AA=C;DP=123;HM2;HM3     GT:GQ:DP        0|0:72:34       0|1:100:21      0|0:100:70
+11     131815028       rs7926244       C       A       .       PASS    AA=C;DP=141     GT:GQ:DP        0|0:72:34       0|1:100:28      0|0:100:78
+22     45575356        rs12168703      A       G       .       PASS    AA=A;DP=156     GT:GQ:DP        0|0:72:34       0|1:100:29      0|0:100:47
+10     19543628        .       T       C       .       PASS    AA=T;DP=133     GT:GQ:DP        0|0:72:34       0|1:100:29      0|0:100:69
+2      168924785       .       A       T       .       PASS    AA=A;DP=153     GT:GQ:DP        0|0:72:34       0|1:100:31      0|0:100:47
+4      19238861        .       G       A       .       PASS    AA=A;DP=137     GT:GQ:DP        0|0:72:34       0|1:100:32      0|0:100:71
+5      131407719       .       T       G       .       PASS    AA=T;DP=119     GT:GQ:DP        0|0:72:34       1|0:100:19      0|1:100:67
+18     64920439        rs58094137      T       A       .       PASS    AA=A;DP=138     GT:GQ:DP        0|0:72:34       1|0:100:21      0|1:100:84
+3      6215999 rs6443031       C       A       .       PASS    AA=C;DP=116     GT:GQ:DP        0|0:72:34       1|0:100:23      0|1:100:58
+17     52218931        rs60066901      C       A       .       PASS    AA=C;DP=133     GT:GQ:DP        0|0:72:35       1|0:100:21      0|1:100:76
+6      130826271       .       A       G       .       PASS    AA=A;DP=152     GT:GQ:DP        0|0:72:35       1|0:100:24      0|1:100:89
+10     124987109       rs3923324       C       T       .       PASS    AA=C;DP=140     GT:GQ:DP        0|0:72:35       1|0:100:28      0|1:100:77
+2      227215701       .       A       C       .       PASS    AA=A;DP=141     GT:GQ:DP        0|0:72:35       1|0:100:30      0|1:100:72
+1      21564364        .       T       C       .       PASS    AA=t;DP=149     GT:GQ:DP        0|0:72:35       1|0:100:33      0|1:100:82
+16     73780773        rs59040134      G       A       .       PASS    AA=g;DP=143     GT:GQ:DP        0|0:72:35       1|0:26:21       0|1:100:91
+1      94863407        rs35649655      C       G       .       PASS    AA=C;DP=117     GT:GQ:DP        0|0:72:35       1|0:45:16       0|1:100:64
+14     51061980        rs61545884      T       C       .       PASS    AA=T;DP=92      GT:GQ:DP        0|0:72:35       1|0:63:9        0|1:100:48
+8      82852921        rs59872751      C       A       .       PASS    AA=C;DP=133     GT:GQ:DP        0|0:72:35       1|0:77:19       0|1:100:79
+9      97625864        .       A       C       .       PASS    AA=A;DP=139     GT:GQ:DP        0|0:72:35       1|0:84:16       0|1:100:41
+11     116842918       .       G       A       .       PASS    AA=G;DP=95      GT:GQ:DP        0|0:72:35       1|0:84:17       0|1:100:33
+9      84370407        .       G       A       .       PASS    AA=G;DP=121     GT:GQ:DP        0|0:72:35       1|0:91:25       0|1:100:63
+11     5256623 rs7946910       C       T       .       PASS    AA=C;DP=143     GT:GQ:DP        0|0:72:35       1|0:93:17       0|1:100:90
+2      165783572       .       C       A       .       PASS    AA=A;DP=91      GT:GQ:DP        0|0:73:24       1|0:23:12       0|1:100:55
+7      53790371        rs62445424      A       T       .       PASS    AA=a;DP=102     GT:GQ:DP        0|0:73:24       1|0:37:17       0|1:100:59
+6      142958950       .       G       A       .       PASS    AA=G;DP=79      GT:GQ:DP        0|0:73:24       1|0:3:10        0|1:100:33
+15     51429217        rs8028694       A       G       .       PASS    AA=A;DP=102     GT:GQ:DP        0|0:73:24       1|1:4:19        0|1:100:59
+1      10675166        .       T       G       .       PASS    AA=G;DP=103     GT:GQ:DP        0|0:73:26       1|0:74:11       0|1:100:64
+11     108681932       rs61046239      C       T       .       PASS    AA=T;DP=135     GT:GQ:DP        0|0:73:27       0|1:100:30      0|0:100:77
+11     1255541 rs5744013       T       C       .       PASS    AA=T;DP=127     GT:GQ:DP        0|0:73:27       1|0:100:22      0|1:100:78
+9      118878265       rs12344337      T       G       .       PASS    AA=T;DP=137     GT:GQ:DP        0|0:73:28       0|1:100:22      0|0:100:85
+1      214925755       .       A       T       .       PASS    AA=A;DP=123     GT:GQ:DP        0|0:73:28       0|1:100:30      0|0:100:66
+8      63333656        rs10094502      A       G       .       PASS    AA=G;DP=92      GT:GQ:DP        0|0:73:28       1|0:74:25       0|1:100:28
+2      46983652        rs1051317       G       T       .       PASS    AA=G;DP=128     GT:GQ:DP        0|0:73:29       0|1:100:33      0|0:100:67
+8      124896975       .       C       A       .       PASS    AA=C;DP=108     GT:GQ:DP        0|0:73:31       0|1:100:18      0|0:100:52
+3      102993390       .       G       A       .       PASS    AA=G;DP=124     GT:GQ:DP        0|0:73:31       1|0:85:30       0|1:100:66
+1      158847776       rs12058421      C       A       .       PASS    AA=C;DP=105;HM2 GT:GQ:DP        0|0:73:32       1|0:100:18      0|1:100:54
+14     94182166        rs10143303      A       G       .       PASS    AA=G;DP=152     GT:GQ:DP        0|0:73:34       0|1:100:30      0|0:100:47
+2      116126933       .       T       C       .       PASS    AA=T;DP=139     GT:GQ:DP        0|0:73:34       1|0:100:29      0|1:100:76
+8      54168474        rs4873719       A       G       .       PASS    AA=G;DP=123     GT:GQ:DP        0|0:73:34       1|1:17:18       0|1:100:72
+10     126805812       rs59268599      A       G       .       PASS    AA=A;DP=123     GT:GQ:DP        0|0:73:35       1|0:93:19       0|1:100:69
+12     82175802        rs11115660      T       C       .       PASS    AA=T;DP=116     GT:GQ:DP        0|0:73:36       1|1:43:17       0|1:100:62
+6      84204679        rs59349571      G       A       .       PASS    AA=G;DP=109     GT:GQ:DP        0|0:73:36       1|1:7:14        0|1:100:59
+2      37729638        .       A       C       .       PASS    AA=A;DP=123     GT:GQ:DP        0|0:73:38       1|0:100:16      0|1:100:67
+19     14757130        rs1971665       T       C       .       PASS    AA=T;DP=127     GT:GQ:DP        0|0:73:39       0|1:100:10      0|0:100:75
+9      7420201 rs7028980       G       T       .       PASS    AA=N;DP=126     GT:GQ:DP        0|0:73:40       1|0:100:25      0|1:100:61
+9      135938797       .       G       T       .       PASS    AA=g;DP=145     GT:GQ:DP        0|0:73:40       1|0:100:30      0|1:100:74
+22     46761095        .       A       G       .       PASS    AA=A;DP=90      GT:GQ:DP        0|0:74:23       0|1:100:10      0|0:100:49
+21     46415891        rs2839132       G       A       .       PASS    AA=G;DP=89      GT:GQ:DP        0|0:74:23       0|1:100:11      0|0:100:45
+10     104126863       .       G       A       .       PASS    AA=G;DP=109     GT:GQ:DP        0|0:74:23       0|1:100:11      0|0:100:78
+19     39523893        .       C       A       .       PASS    AA=C;DP=102     GT:GQ:DP        0|0:74:23       0|1:100:12      0|0:100:68
+13     82663880        rs9531418       A       G       .       PASS    AA=A;DP=62      GT:GQ:DP        0|0:74:23       0|1:100:12      0|0:69:23
+8      125965894       rs6470309       C       T       .       PASS    AA=T;DP=136     GT:GQ:DP        0|0:74:23       0|1:100:13      0|0:100:35
+4      34641380        rs28445578      C       T       .       PASS    AA=T;DP=100     GT:GQ:DP        0|0:74:23       0|1:100:14      0|0:100:63
+8      130683086       .       T       C       .       PASS    AA=T;DP=102     GT:GQ:DP        0|0:74:23       0|1:100:14      0|0:100:64
+20     4017367 rs6116195       T       A       .       PASS    AA=T;DP=104     GT:GQ:DP        0|0:74:23       0|1:100:14      0|0:100:68
+7      32284803        rs55694269      C       A       .       PASS    AA=C;DP=111     GT:GQ:DP        0|0:74:23       0|1:100:14      0|0:100:76
+18     59184544        rs378164        A       G       .       PASS    AA=A;DP=126     GT:GQ:DP        0|0:74:23       0|1:100:14      0|0:100:86
+5      3466432 .       G       A       .       PASS    AA=G;DP=82      GT:GQ:DP        0|0:74:23       0|1:100:15      0|0:100:45
+3      168580691       rs57409059      A       G       .       PASS    AA=C;DP=94      GT:GQ:DP        0|0:74:23       0|1:100:15      0|0:100:56
+1      193935577       .       A       G       .       PASS    AA=A;DP=102     GT:GQ:DP        0|0:74:23       0|1:100:15      0|0:100:62
+20     6375132 rs6054251       C       T       .       PASS    AA=T;DP=102     GT:GQ:DP        0|0:74:23       0|1:100:15      0|0:100:67
+2      41180162        .       C       T       .       PASS    AA=T;DP=120     GT:GQ:DP        0|0:74:23       0|1:100:15      0|0:100:84
+8      126009062       rs11781812      G       T       .       PASS    AA=G;DP=127     GT:GQ:DP        0|0:74:23       0|1:100:15      0|0:100:93
+8      38948174        .       G       A       .       PASS    AA=G;DP=86      GT:GQ:DP        0|0:74:23       0|1:100:16      0|0:100:37
+9      130803259       rs28561848      G       A       .       PASS    AA=A;DP=124     GT:GQ:DP        0|0:74:23       0|1:100:16      0|0:100:38
+13     73281207        rs4264279       A       C       .       PASS    AA=C;DP=87      GT:GQ:DP        0|0:74:23       0|1:100:16      0|0:100:48
+5      84047894        .       G       A       .       PASS    AA=g;DP=112     GT:GQ:DP        0|0:74:23       0|1:100:16      0|0:100:52
+15     46443735        rs12438457      T       C       .       PASS    AA=C;DP=98      GT:GQ:DP        0|0:74:23       0|1:100:16      0|0:100:61
+12     122166424       .       G       A       .       PASS    AA=G;DP=101     GT:GQ:DP        0|0:74:23       0|1:100:16      0|0:100:62
+13     35185192        .       C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        0|0:74:23       0|1:100:16      0|0:100:76
+7      135684334       .       G       A       .       PASS    AA=G;DP=115     GT:GQ:DP        0|0:74:23       0|1:100:16      0|0:100:77
+15     48896243        rs7179865       G       A       .       PASS    AA=g;DP=108     GT:GQ:DP        0|0:74:23       0|1:100:16      0|0:81:27
+4      7511454 .       C       A       .       PASS    AA=C;DP=121     GT:GQ:DP        0|0:74:23       0|1:100:16      0|0:91:42
+22     39427391        rs5995898       A       G       .       PASS    AA=.;DP=95      GT:GQ:DP        0|0:74:23       0|1:100:17      0|0:100:56
+4      58655973        .       A       G       .       PASS    AA=A;DP=97      GT:GQ:DP        0|0:74:23       0|1:100:17      0|0:100:57
+2      154984421       .       T       C       .       PASS    AA=T;DP=105     GT:GQ:DP        0|0:74:23       0|1:100:17      0|0:100:63
+5      63230703        rs59398218      A       G       .       PASS    AA=A;DP=104     GT:GQ:DP        0|0:74:23       0|1:100:17      0|0:100:65
+12     98678368        rs10860516      C       T       .       PASS    AA=C;DP=111     GT:GQ:DP        0|0:74:23       0|1:100:17      0|0:100:71
+15     98673412        rs11855310      A       T       .       PASS    AA=a;DP=87      GT:GQ:DP        0|0:74:23       0|1:100:18      0|0:100:36
+18     63696595        .       A       T       .       PASS    AA=A;DP=88      GT:GQ:DP        0|0:74:23       0|1:100:18      0|0:100:48
+11     16284459        rs56719438      T       C       .       PASS    AA=T;DP=104     GT:GQ:DP        0|0:74:23       0|1:100:18      0|0:100:62
+12     127275176       rs10773506      G       A       .       PASS    AA=A;DP=127     GT:GQ:DP        0|0:74:23       0|1:100:19      0|0:100:42
+7      42953462        .       C       T       .       PASS    AA=C;DP=130     GT:GQ:DP        0|0:74:23       0|1:100:19      0|0:100:44
+13     41242394        .       G       A       .       PASS    AA=G;DP=91      GT:GQ:DP        0|0:74:23       0|1:100:19      0|0:100:47
+11     87410870        rs638918        A       G       .       PASS    AA=A;DP=91      GT:GQ:DP        0|0:74:23       0|1:100:19      0|0:100:49
+4      38752093        .       C       T       .       PASS    AA=C;DP=94      GT:GQ:DP        0|0:74:23       0|1:100:19      0|0:100:51
+7      9194974 rs28569230      G       C       .       PASS    AA=G;DP=93      GT:GQ:DP        0|0:74:23       0|1:100:19      0|0:100:54
+6      58111530        .       A       G       .       PASS    AA=.;DP=100     GT:GQ:DP        0|0:74:23       0|1:100:19      0|0:100:58
+6      81751752        rs973401        A       C       .       PASS    AA=A;DP=104     GT:GQ:DP        0|0:74:23       0|1:100:19      0|0:100:62
+14     87365656        rs10134033      C       T       .       PASS    AA=C;DP=112     GT:GQ:DP        0|0:74:23       0|1:100:19      0|0:100:68
+2      124933374       rs2420861       G       T       .       PASS    AA=G;DP=112     GT:GQ:DP        0|0:74:23       0|1:100:19      0|0:100:71
+18     31873527        .       T       C       .       PASS    AA=T;DP=115     GT:GQ:DP        0|0:74:23       0|1:100:19      0|0:100:74
+5      119815394       .       G       T       .       PASS    AA=G;DP=117     GT:GQ:DP        0|0:74:23       0|1:100:19      0|0:100:77
+3      71161885        .       C       A       .       PASS    AA=C;DP=129     GT:GQ:DP        0|0:74:23       0|1:100:19      0|0:100:89
+18     65296963        rs8089890       A       C       .       PASS    AA=A;DP=108     GT:GQ:DP        0|0:74:23       0|1:100:20      0|0:100:64
+8      27215753        rs11996459      G       A       .       PASS    AA=G;DP=109     GT:GQ:DP        0|0:74:23       0|1:100:20      0|0:100:66
+12     78665176        rs17005859      C       T       .       PASS    AA=C;DP=109     GT:GQ:DP        0|0:74:23       0|1:100:20      0|0:100:68
+5      73167151        .       A       G       .       PASS    AA=G;DP=110     GT:GQ:DP        0|0:74:23       0|1:100:20      0|0:100:68
+7      154320263       rs28529729      A       G       .       PASS    AA=G;DP=110     GT:GQ:DP        0|0:74:23       0|1:100:20      0|0:100:68
+20     49809127        .       G       A       .       PASS    AA=G;DP=117     GT:GQ:DP        0|0:74:23       0|1:100:20      0|0:100:74
+19     22051307        rs11667209      A       G       .       PASS    AA=A;DP=117     GT:GQ:DP        0|0:74:23       0|1:100:21      0|0:100:34
+11     5033501 .       G       T       .       PASS    AA=G;DP=89      GT:GQ:DP        0|0:74:23       0|1:100:21      0|0:100:45
+7      83690007        rs11979193      A       T       .       PASS    AA=A;DP=105     GT:GQ:DP        0|0:74:23       0|1:100:21      0|0:100:60
+5      1970210 rs11133915      C       T       .       PASS    AA=T;DP=110     GT:GQ:DP        0|0:74:23       0|1:100:21      0|0:100:66
+3      60049853        .       C       T       .       PASS    AA=C;DP=113     GT:GQ:DP        0|0:74:23       0|1:100:21      0|0:100:70
+1      214165544       .       C       T       .       PASS    AA=C;DP=121     GT:GQ:DP        0|0:74:23       0|1:100:21      0|0:100:74
+14     32406632        rs17522991      A       G       .       PASS    AA=A;DP=118     GT:GQ:DP        0|0:74:23       0|1:100:21      0|0:100:74
+11     133291800       rs3824992       A       G       .       PASS    AA=G;DP=134     GT:GQ:DP        0|0:74:23       0|1:100:21      0|0:100:90
+3      139218935       rs60883619      C       A       .       PASS    AA=C;DP=106     GT:GQ:DP        0|0:74:23       0|1:100:21      0|0:69:23
+9      16280921        .       T       C       .       PASS    AA=T;DP=126     GT:GQ:DP        0|0:74:23       0|1:100:21      0|0:84:28
+11     5296462 rs7945616       C       T       .       PASS    AA=T;DP=101     GT:GQ:DP        0|0:74:23       0|1:100:22      0|0:100:47
+3      161982454       .       G       A       .       PASS    AA=G;DP=97      GT:GQ:DP        0|0:74:23       0|1:100:22      0|0:100:51
+7      10413637        rs17817447      T       A       .       PASS    AA=T;DP=102     GT:GQ:DP        0|0:74:23       0|1:100:22      0|0:100:57
+5      4354908 .       T       G       .       PASS    AA=G;DP=110     GT:GQ:DP        0|0:74:23       0|1:100:22      0|0:100:63
+11     11638305        rs4910405       C       T       .       PASS    AA=C;DP=118     GT:GQ:DP        0|0:74:23       0|1:100:22      0|0:100:70
+4      105768981       .       T       C       .       PASS    AA=T;DP=115     GT:GQ:DP        0|0:74:23       0|1:100:22      0|0:100:72
+8      137330239       .       A       G       .       PASS    AA=A;DP=120     GT:GQ:DP        0|0:74:23       0|1:100:22      0|0:100:75
+10     107052934       rs12261382      G       A       .       PASS    AA=A;DP=128     GT:GQ:DP        0|0:74:23       0|1:100:22      0|0:100:80
+7      64088148        rs12056103      T       C       .       PASS    AA=t;DP=123     GT:GQ:DP        0|0:74:23       0|1:100:22      0|0:100:80
+10     124399170       .       C       T       .       PASS    AA=C;DP=127     GT:GQ:DP        0|0:74:23       0|1:100:23      0|0:100:35
+9      112982784       rs16915789      C       T       .       PASS    AA=C;DP=121     GT:GQ:DP        0|0:74:23       0|1:100:23      0|0:100:37
+X      5581774 rs3736158       A       G       .       PASS    AA=.;DP=123     GT:GQ:DP        0|0:74:23       0|1:100:23      0|0:100:45
+4      21199358        rs7657287       G       A       .       PASS    AA=G;DP=108     GT:GQ:DP        0|0:74:23       0|1:100:23      0|0:100:61
+3      99482982        rs60934368      T       C       .       PASS    AA=T;DP=113     GT:GQ:DP        0|0:74:23       0|1:100:23      0|0:100:68
+12     19863503        .       G       C       .       PASS    AA=G;DP=117     GT:GQ:DP        0|0:74:23       0|1:100:23      0|0:100:73
+8      15235189        rs4496968       T       A       .       PASS    AA=A;DP=122     GT:GQ:DP        0|0:74:23       0|1:100:23      0|0:100:81
+1      213164922       rs10494986      G       A       .       PASS    AA=g;DP=110;HM2;HM3     GT:GQ:DP        0|0:74:23       0|1:100:24      0|0:100:60
+5      78759562        rs35601466      G       T       .       PASS    AA=T;DP=109     GT:GQ:DP        0|0:74:23       0|1:100:24      0|0:100:63
+4      42173727        .       T       C       .       PASS    AA=T;DP=112     GT:GQ:DP        0|0:74:23       0|1:100:24      0|0:100:64
+3      189767401       rs12497593      T       A       .       PASS    AA=A;DP=112     GT:GQ:DP        0|0:74:23       0|1:100:24      0|0:100:65
+1      194590917       rs11803170      G       C       .       PASS    AA=g;DP=118;HM2 GT:GQ:DP        0|0:74:23       0|1:100:24      0|0:100:67
+11     23970791        .       A       G       .       PASS    AA=.;DP=116     GT:GQ:DP        0|0:74:23       0|1:100:24      0|0:100:68
+14     65333760        .       T       C       .       PASS    AA=C;DP=120     GT:GQ:DP        0|0:74:23       0|1:100:24      0|0:100:70
+10     34351307        rs182698        C       T       .       PASS    AA=C;DP=121     GT:GQ:DP        0|0:74:23       0|1:100:24      0|0:100:72
+7      84250644        .       A       T       .       PASS    AA=A;DP=128     GT:GQ:DP        0|0:74:23       0|1:100:24      0|0:100:80
+10     37346653        rs2459424       G       A       .       PASS    AA=C;DP=141     GT:GQ:DP        0|0:74:23       0|1:100:25      0|0:100:46
+11     84537986        .       T       C       .       PASS    AA=T;DP=97      GT:GQ:DP        0|0:74:23       0|1:100:25      0|0:100:47
+2      113161892       rs7589655       T       C       .       PASS    AA=T;DP=163     GT:GQ:DP        0|0:74:23       0|1:100:25      0|0:100:47
+1      116580892       .       C       T       .       PASS    AA=C;DP=142     GT:GQ:DP        0|0:74:23       0|1:100:25      0|0:100:50
+11     79529261        .       C       T       .       PASS    AA=C;DP=112     GT:GQ:DP        0|0:74:23       0|1:100:25      0|0:100:64
+7      39413069        rs2074934       C       T       .       PASS    AA=T;DP=115     GT:GQ:DP        0|0:74:23       0|1:100:25      0|0:100:67
+15     36515571        .       T       C       .       PASS    AA=T;DP=122     GT:GQ:DP        0|0:74:23       0|1:100:25      0|0:100:72
+2      162496265       .       T       C       .       PASS    AA=T;DP=93      GT:GQ:DP        0|0:74:23       0|1:100:26      0|0:100:45
+17     49956674        .       T       C       .       PASS    AA=T;DP=97      GT:GQ:DP        0|0:74:23       0|1:100:26      0|0:100:48
+6      64035405        .       C       A       .       PASS    AA=C;DP=101     GT:GQ:DP        0|0:74:23       0|1:100:26      0|0:100:54
+10     56465702        rs10825446      A       G       .       PASS    AA=G;DP=105     GT:GQ:DP        0|0:74:23       0|1:100:26      0|0:100:56
+10     42523636        .       T       G       .       PASS    AA=t;DP=109     GT:GQ:DP        0|0:74:23       0|1:100:26      0|0:100:57
+8      58313445        .       G       A       .       PASS    AA=g;DP=116     GT:GQ:DP        0|0:74:23       0|1:100:26      0|0:100:66
+11     54966753        .       G       C       .       PASS    AA=.;DP=126     GT:GQ:DP        0|0:74:23       0|1:100:26      0|0:100:75
+5      28851847        .       C       T       .       PASS    AA=C;DP=102     GT:GQ:DP        0|0:74:23       0|1:100:27      0|0:100:46
+8      138684410       rs11990591      G       A       .       PASS    AA=A;DP=102     GT:GQ:DP        0|0:74:23       0|1:100:27      0|0:100:52
+7      110970680       .       C       T       .       PASS    AA=C;DP=128     GT:GQ:DP        0|0:74:23       0|1:100:27      0|0:100:80
+15     94754388        .       T       C       .       PASS    AA=t;DP=104     GT:GQ:DP        0|0:74:23       0|1:100:28      0|0:100:52
+2      45657690        rs13387525      A       C       .       PASS    AA=C;DP=108     GT:GQ:DP        0|0:74:23       0|1:100:28      0|0:100:55
+3      97785228        .       A       G       .       PASS    AA=A;DP=112     GT:GQ:DP        0|0:74:23       0|1:100:28      0|0:100:62
+14     23319234        .       T       C       .       PASS    AA=T;DP=115     GT:GQ:DP        0|0:74:23       0|1:100:28      0|0:100:66
+10     123124841       .       T       C       .       PASS    AA=T;DP=119     GT:GQ:DP        0|0:74:23       0|1:100:28      0|0:100:68
+4      60494980        rs1988236       C       G       .       PASS    AA=C;DP=125     GT:GQ:DP        0|0:74:23       0|1:100:28      0|0:75:27
+5      86233444        rs10059088      T       C       .       PASS    AA=T;DP=105     GT:GQ:DP        0|0:74:23       0|1:100:29      0|0:100:51
+12     20198535        rs11045085      G       T       .       PASS    AA=G;DP=122     GT:GQ:DP        0|0:74:23       0|1:100:29      0|0:100:68
+16     81762686        .       G       T       .       PASS    AA=T;DP=120     GT:GQ:DP        0|0:74:23       0|1:100:29      0|0:100:68
+7      18007743        rs4421270       A       T       .       PASS    AA=A;DP=87      GT:GQ:DP        0|0:74:23       0|1:100:29      0|0:69:33
+2      164733811       .       G       A       .       PASS    AA=g;DP=113     GT:GQ:DP        0|0:74:23       0|1:100:30      0|0:100:60
+2      76123318        .       C       G       .       PASS    AA=C;DP=125     GT:GQ:DP        0|0:74:23       0|1:100:31      0|0:100:70
+6      65999195        rs9453229       C       A       .       PASS    AA=c;DP=129     GT:GQ:DP        0|0:74:23       0|1:100:33      0|0:99:33
+1      191505366       .       C       T       .       PASS    AA=C;DP=119     GT:GQ:DP        0|0:74:23       0|1:100:35      0|0:100:63
+17     19322175        .       G       A       .       PASS    AA=G;DP=75      GT:GQ:DP        0|0:74:23       0|1:100:9       0|0:90:31
+8      142188301       rs12549705      C       T       .       PASS    AA=c;DP=101     GT:GQ:DP        0|0:74:24       0|1:100:11      0|0:100:67
+11     29562261        rs326762        G       A       .       PASS    AA=G;DP=79      GT:GQ:DP        0|0:74:24       0|1:100:13      0|0:100:41
+14     48524475        .       G       A       .       PASS    AA=G;DP=106     GT:GQ:DP        0|0:74:24       0|1:100:14      0|0:100:68
+1      170450307       rs16844090      G       A       .       PASS    AA=g;DP=93;HM3  GT:GQ:DP        0|0:74:24       0|1:100:16      0|0:100:54
+2      170048498       rs12612150      T       C       .       PASS    AA=C;DP=115     GT:GQ:DP        0|0:74:24       0|1:100:16      0|0:100:78
+5      52678710        .       G       A       .       PASS    AA=G;DP=123     GT:GQ:DP        0|0:74:24       0|1:100:16      0|0:100:81
+11     115916659       rs7936161       C       T       .       PASS    AA=T;DP=101     GT:GQ:DP        0|0:74:24       0|1:100:17      0|0:100:61
+10     52667865        .       G       A       .       PASS    AA=G;DP=98      GT:GQ:DP        0|0:74:24       0|1:100:18      0|0:100:60
+2      162298476       .       C       T       .       PASS    AA=C;DP=118     GT:GQ:DP        0|0:74:24       0|1:100:18      0|0:100:72
+9      134467759       rs17400224      G       A       .       PASS    AA=G;DP=132     GT:GQ:DP        0|0:74:24       0|1:100:19      0|0:100:44
+9      17751183        rs9407839       A       T       .       PASS    AA=A;DP=100     GT:GQ:DP        0|0:74:24       0|1:100:19      0|0:100:57
+10     106871651       .       G       A       .       PASS    AA=g;DP=116     GT:GQ:DP        0|0:74:24       0|1:100:19      0|0:100:71
+1      235390499       rs2490363       T       C       .       PASS    AA=C;DP=102;HM2 GT:GQ:DP        0|0:74:24       0|1:100:20      0|0:100:58
+11     37063851        rs16929999      C       G       .       PASS    AA=C;DP=122     GT:GQ:DP        0|0:74:24       0|1:100:20      0|0:100:81
+2      137431793       rs483623        T       A       .       PASS    AA=A;DP=106     GT:GQ:DP        0|0:74:24       0|1:100:21      0|0:100:61
+13     34486839        .       C       T       .       PASS    AA=C;DP=126     GT:GQ:DP        0|0:74:24       0|1:100:22      0|0:100:77
+1      79576205        .       C       T       .       PASS    AA=C;DP=93      GT:GQ:DP        0|0:74:24       0|1:100:23      0|0:100:35
+6      151932940       rs12213456      A       G       .       PASS    AA=A;DP=105     GT:GQ:DP        0|0:74:24       0|1:100:23      0|0:100:58
+12     10539607        rs10772296      G       A       .       PASS    AA=G;DP=113     GT:GQ:DP        0|0:74:24       0|1:100:23      0|0:100:66
+17     49676295        rs17738092      A       G       .       PASS    AA=A;DP=133     GT:GQ:DP        0|0:74:24       0|1:100:24      0|0:100:42
+6      21257113        .       A       G       .       PASS    AA=A;DP=94      GT:GQ:DP        0|0:74:24       0|1:100:24      0|0:100:46
+2      100916613       rs13025524      G       A       .       PASS    AA=G;DP=122     GT:GQ:DP        0|0:74:24       0|1:100:24      0|0:100:76
+5      109677542       .       A       G       .       PASS    AA=A;DP=131     GT:GQ:DP        0|0:74:24       0|1:100:24      0|0:99:33
+13     57523672        rs1575903       A       G       .       PASS    AA=A;DP=128     GT:GQ:DP        0|0:74:24       0|1:100:25      0|0:100:38
+2      25688027        rs6745864       T       G       .       PASS    AA=G;DP=130     GT:GQ:DP        0|0:74:24       0|1:100:25      0|0:100:78
+6      110401996       .       A       G       .       PASS    AA=A;DP=130     GT:GQ:DP        0|0:74:24       0|1:100:25      0|0:100:82
+15     92480933        rs11853836      T       G       .       PASS    AA=G;DP=143     GT:GQ:DP        0|0:74:24       0|1:100:25      0|0:100:93
+3      179183106       .       G       A       .       PASS    AA=G;DP=108     GT:GQ:DP        0|0:74:24       0|1:100:26      0|0:100:57
+1      194767053       .       G       A       .       PASS    AA=G;DP=120     GT:GQ:DP        0|0:74:24       0|1:100:26      0|0:100:70
+11     26304490        rs7940247       G       A       .       PASS    AA=g;DP=125     GT:GQ:DP        0|0:74:24       0|1:100:26      0|0:100:76
+7      154150638       .       C       A       .       PASS    AA=c;DP=133     GT:GQ:DP        0|0:74:24       0|1:100:26      0|0:100:82
+7      133969531       rs10235063      C       G       .       PASS    AA=C;DP=131     GT:GQ:DP        0|0:74:24       0|1:100:27      0|0:100:42
+5      103042042       rs1152165       A       G       .       PASS    AA=A;DP=107     GT:GQ:DP        0|0:74:24       0|1:100:27      0|0:100:56
+2      138255731       rs1455999       A       T       .       PASS    AA=A;DP=137     GT:GQ:DP        0|0:74:24       0|1:100:27      0|0:100:85
+2      66599005        .       G       C       .       PASS    AA=G;DP=120     GT:GQ:DP        0|0:74:24       0|1:100:28      0|0:100:68
+7      16373451        .       T       C       .       PASS    AA=T;DP=117     GT:GQ:DP        0|0:74:24       0|1:100:28      0|0:100:69
+6      81818927        rs17783640      C       T       .       PASS    AA=c;DP=117     GT:GQ:DP        0|0:74:24       0|1:100:30      0|0:100:64
+1      31700100        rs1934301       G       A       .       PASS    AA=G;DP=126     GT:GQ:DP        0|0:74:24       0|1:100:31      0|0:100:70
+1      97063655        rs17115840      G       A       .       PASS    AA=G;DP=127;HM3 GT:GQ:DP        0|0:74:24       0|1:100:32      0|0:100:72
+10     95508865        rs9420628       A       G       .       PASS    AA=A;DP=132     GT:GQ:DP        0|0:74:24       0|1:100:32      0|0:100:77
+17     67023694        rs10512572      G       A       .       PASS    AA=T;DP=141     GT:GQ:DP        0|0:74:24       0|1:100:35      0|0:100:74
+13     78798384        .       G       C       .       PASS    AA=G;DP=112     GT:GQ:DP        0|0:74:24       0|1:100:35      0|0:84:30
+20     22636452        .       C       A       .       PASS    AA=C;DP=83      GT:GQ:DP        0|0:74:24       1|0:100:12      0|1:100:45
+12     102076376       rs7968481       T       C       .       PASS    AA=T;DP=97      GT:GQ:DP        0|0:74:24       1|0:100:12      0|1:100:62
+4      180297918       .       C       T       .       PASS    AA=C;DP=79      GT:GQ:DP        0|0:74:24       1|0:100:14      0|1:100:41
+11     22734555        rs2173513       T       C       .       PASS    AA=T;DP=79      GT:GQ:DP        0|0:74:24       1|0:100:15      0|1:100:38
+3      25673525        rs11129202      G       C       .       PASS    AA=G;DP=89      GT:GQ:DP        0|0:74:24       1|0:100:15      0|1:100:52
+3      130819309       .       G       C       .       PASS    AA=G;DP=94      GT:GQ:DP        0|0:74:24       1|0:100:15      0|1:100:54
+1      107936617       rs11185142      T       C       .       PASS    AA=T;DP=89;HM2  GT:GQ:DP        0|0:74:24       1|0:100:16      0|1:100:51
+10     96112885        rs57412910      G       A       .       PASS    AA=G;DP=108     GT:GQ:DP        0|0:74:24       1|0:100:16      0|1:100:55
+4      169068244       .       T       C       .       PASS    AA=T;DP=98      GT:GQ:DP        0|0:74:24       1|0:100:16      0|1:100:59
+17     24344358        rs34039488      G       A       .       PASS    AA=G;DP=103     GT:GQ:DP        0|0:74:24       1|0:100:16      0|1:100:61
+3      182638993       .       T       G       .       PASS    AA=T;DP=102     GT:GQ:DP        0|0:74:24       1|0:100:16      0|1:100:62
+4      80384733        rs7684862       A       T       .       PASS    AA=A;DP=71      GT:GQ:DP        0|0:74:24       1|0:100:17      0|1:100:22
+13     67992225        rs7337183       A       G       .       PASS    AA=A;DP=90      GT:GQ:DP        0|0:74:24       1|0:100:17      0|1:100:45
+16     64371857        rs466221        G       C       .       PASS    AA=G;DP=88      GT:GQ:DP        0|0:74:24       1|0:100:17      0|1:100:49
+6      131674108       .       A       C       .       PASS    AA=A;DP=90      GT:GQ:DP        0|0:74:24       1|0:100:17      0|1:100:50
+15     98378649        rs7180283       T       G       .       PASS    AA=G;DP=104     GT:GQ:DP        0|0:74:24       1|0:100:17      0|1:100:63
+14     84338344        rs2765932       A       G       .       PASS    AA=A;DP=108     GT:GQ:DP        0|0:74:24       1|0:100:17      0|1:100:66
+1      169369794       .       T       A       .       PASS    AA=T;DP=107     GT:GQ:DP        0|0:74:24       1|0:100:17      0|1:100:69
+11     14002157        .       T       C       .       PASS    AA=T;DP=115     GT:GQ:DP        0|0:74:24       1|0:100:17      0|1:100:74
+20     6048088 rs10373 A       G       .       PASS    AA=A;DP=126     GT:GQ:DP        0|0:74:24       1|0:100:17      0|1:100:81
+21     21570168        .       G       A       .       PASS    AA=G;DP=101     GT:GQ:DP        0|0:74:24       1|0:100:18      0|1:100:19
+4      63349182        rs56275203      G       A       .       PASS    AA=G;DP=80      GT:GQ:DP        0|0:74:24       1|0:100:18      0|1:100:38
+9      101696133       .       A       G       .       PASS    AA=A;DP=86      GT:GQ:DP        0|0:74:24       1|0:100:18      0|1:100:44
+2      3196329 rs4854142       T       C       .       PASS    AA=C;DP=87      GT:GQ:DP        0|0:74:24       1|0:100:18      0|1:100:45
+21     23570136        rs2828005       A       T       .       PASS    AA=A;DP=87      GT:GQ:DP        0|0:74:24       1|0:100:18      0|1:100:45
+11     29126057        rs1463712       A       T       .       PASS    AA=T;DP=89      GT:GQ:DP        0|0:74:24       1|0:100:18      0|1:100:47
+5      97273533        .       G       A       .       PASS    AA=G;DP=106     GT:GQ:DP        0|0:74:24       1|0:100:18      0|1:100:62
+11     31187116        rs12364868      A       G       .       PASS    AA=A;DP=106     GT:GQ:DP        0|0:74:24       1|0:100:18      0|1:100:64
+13     37651709        .       A       G       .       PASS    AA=A;DP=112     GT:GQ:DP        0|0:74:24       1|0:100:18      0|1:100:69
+4      158452135       .       C       A       .       PASS    AA=C;DP=82      GT:GQ:DP        0|0:74:24       1|0:100:19      0|1:100:27
+8      84069358        rs16911241      A       G       .       PASS    AA=A;DP=87      GT:GQ:DP        0|0:74:24       1|0:100:19      0|1:100:43
+5      90955687        rs2218238       A       G       .       PASS    AA=A;DP=87      GT:GQ:DP        0|0:74:24       1|0:100:19      0|1:100:47
+14     32043632        rs1956995       C       T       .       PASS    AA=C;DP=96      GT:GQ:DP        0|0:74:24       1|0:100:19      0|1:100:53
+16     76965068        rs13338044      T       C       .       PASS    AA=T;DP=101     GT:GQ:DP        0|0:74:24       1|0:100:19      0|1:100:56
+22     48144758        .       G       A       .       PASS    AA=G;DP=109     GT:GQ:DP        0|0:74:24       1|0:100:19      0|1:100:64
+5      82208599        rs10474074      T       C       .       PASS    AA=T;DP=108     GT:GQ:DP        0|0:74:24       1|0:100:19      0|1:100:64
+7      12409610        rs7796586       G       C       .       PASS    AA=C;DP=109     GT:GQ:DP        0|0:74:24       1|0:100:19      0|1:100:66
+8      220186  .       A       G       .       PASS    AA=A;DP=112     GT:GQ:DP        0|0:74:24       1|0:100:19      0|1:100:71
+5      26235421        rs59841864      T       C       .       PASS    AA=T;DP=114     GT:GQ:DP        0|0:74:24       1|0:100:19      0|1:100:72
+4      31048571        .       T       C       .       PASS    AA=T;DP=88      GT:GQ:DP        0|0:74:24       1|0:100:20      0|1:100:34
+5      92426554        .       T       C       .       PASS    AA=T;DP=93      GT:GQ:DP        0|0:74:24       1|0:100:20      0|1:100:49
+4      164950450       rs4691937       T       C       .       PASS    AA=T;DP=100     GT:GQ:DP        0|0:74:24       1|0:100:20      0|1:100:53
+11     134000221       rs3017984       G       A       .       PASS    AA=g;DP=116     GT:GQ:DP        0|0:74:24       1|0:100:20      0|1:100:70
+14     36213493        rs17104944      G       T       .       PASS    AA=G;DP=127     GT:GQ:DP        0|0:74:24       1|0:100:20      0|1:100:70
+10     65372006        rs16919039      T       C       .       PASS    AA=C;DP=130     GT:GQ:DP        0|0:74:24       1|0:100:21      0|1:100:47
+5      93325466        .       A       G       .       PASS    AA=A;DP=128     GT:GQ:DP        0|0:74:24       1|0:100:21      0|1:100:47
+8      83806814        .       A       G       .       PASS    AA=A;DP=92      GT:GQ:DP        0|0:74:24       1|0:100:21      0|1:100:47
+13     58361313        rs4612949       A       G       .       PASS    AA=A;DP=96      GT:GQ:DP        0|0:74:24       1|0:100:21      0|1:100:50
+4      152314136       rs56954649      T       C       .       PASS    AA=T;DP=107     GT:GQ:DP        0|0:74:24       1|0:100:21      0|1:100:58
+21     24479551        .       C       A       .       PASS    AA=C;DP=105     GT:GQ:DP        0|0:74:24       1|0:100:21      0|1:100:60
+2      2119186 .       A       T       .       PASS    AA=A;DP=106     GT:GQ:DP        0|0:74:24       1|0:100:21      0|1:100:61
+2      75783650        rs58932573      G       A       .       PASS    AA=G;DP=106     GT:GQ:DP        0|0:74:24       1|0:100:21      0|1:100:62
+17     13603057        .       C       T       .       PASS    AA=C;DP=107     GT:GQ:DP        0|0:74:24       1|0:100:21      0|1:100:64
+13     109364001       rs9555646       T       C       .       PASS    AA=C;DP=115     GT:GQ:DP        0|0:74:24       1|0:100:21      0|1:100:70
+17     50166750        rs714035        C       T       .       PASS    AA=c;DP=115     GT:GQ:DP        0|0:74:24       1|0:100:21      0|1:100:73
+5      134766499       rs2617257       A       G       .       PASS    AA=G;DP=133     GT:GQ:DP        0|0:74:24       1|0:100:21      0|1:100:87
+7      98021202        rs705313        G       A       .       PASS    AA=G;DP=96      GT:GQ:DP        0|0:74:24       1|0:100:22      0|1:100:47
+21     39367909        rs2242939       T       C       .       PASS    AA=T;DP=98      GT:GQ:DP        0|0:74:24       1|0:100:22      0|1:100:54
+5      159203181       rs769114        A       G       .       PASS    AA=A;DP=109     GT:GQ:DP        0|0:74:24       1|0:100:22      0|1:100:58
+7      24131243        rs17148836      A       G       .       PASS    AA=G;DP=109     GT:GQ:DP        0|0:74:24       1|0:100:22      0|1:100:67
+7      108678221       rs916690        T       G       .       PASS    AA=T;DP=123     GT:GQ:DP        0|0:74:24       1|0:100:22      0|1:100:77
+3      173062971       rs60084746      A       G       .       PASS    AA=A;DP=130     GT:GQ:DP        0|0:74:24       1|0:100:23      0|1:100:36
+11     6729425 rs4757967       A       C       .       PASS    AA=A;DP=107     GT:GQ:DP        0|0:74:24       1|0:100:23      0|1:100:48
+4      101536986       rs17030030      T       G       .       PASS    AA=T;DP=95      GT:GQ:DP        0|0:74:24       1|0:100:23      0|1:100:48
+11     26628881        .       C       A       .       PASS    AA=C;DP=103     GT:GQ:DP        0|0:74:24       1|0:100:23      0|1:100:58
+16     76896617        rs752310        C       T       .       PASS    AA=T;DP=111     GT:GQ:DP        0|0:74:24       1|0:100:23      0|1:100:64
+2      128223822       .       G       C       .       PASS    AA=g;DP=136     GT:GQ:DP        0|0:74:24       1|0:100:24      0|1:100:39
+1      79278107        rs12091969      A       G       .       PASS    AA=A;DP=94;HM2  GT:GQ:DP        0|0:74:24       1|0:100:24      0|1:100:46
+1      156642253       rs1321640       G       A       .       PASS    AA=A;DP=110;HM2;HM3     GT:GQ:DP        0|0:74:24       1|0:100:24      0|1:100:62
+1      36065797        rs636671        T       C       .       PASS    AA=T;DP=115;HM2;HM3     GT:GQ:DP        0|0:74:24       1|0:100:24      0|1:100:67
+8      52324159        .       C       G       .       PASS    AA=T;DP=117     GT:GQ:DP        0|0:74:24       1|0:100:24      0|1:100:68
+20     15923581        rs1225883       A       T       .       PASS    AA=A;DP=118     GT:GQ:DP        0|0:74:24       1|0:100:24      0|1:100:69
+9      114477067       rs2132832       T       C       .       PASS    AA=T;DP=118     GT:GQ:DP        0|0:74:24       1|0:100:24      0|1:100:69
+2      199348665       rs11680034      T       C       .       PASS    AA=T;DP=121     GT:GQ:DP        0|0:74:24       1|0:100:24      0|1:100:70
+2      51764786        .       C       A       .       PASS    AA=C;DP=122     GT:GQ:DP        0|0:74:24       1|0:100:24      0|1:100:75
+21     37028182        rs2269192       G       T       .       PASS    AA=G;DP=112     GT:GQ:DP        0|0:74:24       1|0:100:25      0|1:100:64
+13     72865917        rs4885097       A       G       .       PASS    AA=A;DP=118     GT:GQ:DP        0|0:74:24       1|0:100:25      0|1:100:69
+11     128171315       rs2268604       C       A       .       PASS    AA=A;DP=119     GT:GQ:DP        0|0:74:24       1|0:100:25      0|1:100:70
+6      162976702       rs59277455      T       A       .       PASS    AA=T;DP=120     GT:GQ:DP        0|0:74:24       1|0:100:25      0|1:100:72
+18     73888863        rs7505184       T       C       .       PASS    AA=T;DP=119     GT:GQ:DP        0|0:74:24       1|0:100:25      0|1:100:74
+15     43084305        .       C       T       .       PASS    AA=C;DP=137     GT:GQ:DP        0|0:74:24       1|0:100:25      0|1:100:89
+3      196300165       rs9857586       T       C       .       PASS    AA=T;DP=134     GT:GQ:DP        0|0:74:24       1|0:100:26      0|1:100:47
+6      70276845        rs2757761       T       C       .       PASS    AA=T;DP=95      GT:GQ:DP        0|0:74:24       1|0:100:26      0|1:100:47
+5      104317465       rs3852174       T       G       .       PASS    AA=T;DP=107     GT:GQ:DP        0|0:74:24       1|0:100:26      0|1:100:61
+3      84678301        rs12635834      G       C       .       PASS    AA=G;DP=115     GT:GQ:DP        0|0:74:24       1|0:100:26      0|1:100:67
+4      44477997        rs17654290      G       A       .       PASS    AA=G;DP=114     GT:GQ:DP        0|0:74:24       1|0:100:26      0|1:100:67
+1      46990493        rs614078        T       C       .       PASS    AA=C;DP=123;HM2;HM3     GT:GQ:DP        0|0:74:24       1|0:100:26      0|1:100:75
+20     4625645 rs59116307      G       A       .       PASS    AA=G;DP=124     GT:GQ:DP        0|0:74:24       1|0:100:26      0|1:100:75
+6      32514320        rs3129871       A       C       .       PASS    AA=C;DP=124     GT:GQ:DP        0|0:74:24       1|0:100:26      0|1:100:76
+9      28618900        rs58240319      C       T       .       PASS    AA=C;DP=127     GT:GQ:DP        0|0:74:24       1|0:100:26      0|1:100:80
+6      165263077       rs9365816       G       A       .       PASS    AA=A;DP=101     GT:GQ:DP        0|0:74:24       1|0:100:27      0|1:100:51
+20     15316077        rs6043247       C       G       .       PASS    AA=C;DP=115     GT:GQ:DP        0|0:74:24       1|0:100:27      0|1:100:65
+17     61045955        .       G       T       .       PASS    AA=G;DP=115     GT:GQ:DP        0|0:74:24       1|0:100:27      0|1:100:66
+2      21789386        .       G       A       .       PASS    AA=g;DP=99      GT:GQ:DP        0|0:74:24       1|0:100:28      0|1:100:47
+13     91427858        rs12184638      A       G       .       PASS    AA=A;DP=100     GT:GQ:DP        0|0:74:24       1|0:100:28      0|1:100:49
+6      18002836        rs59276805      T       C       .       PASS    AA=T;DP=101     GT:GQ:DP        0|0:74:24       1|0:100:28      0|1:100:49
+15     69299369        rs11853577      T       C       .       PASS    AA=T;DP=159     GT:GQ:DP        0|0:74:24       1|0:100:28      0|1:100:59
+7      88564994        .       T       C       .       PASS    AA=T;DP=116     GT:GQ:DP        0|0:74:24       1|0:100:28      0|1:100:63
+11     77789061        rs59935010      G       A       .       PASS    AA=G;DP=126     GT:GQ:DP        0|0:74:24       1|0:100:28      0|1:100:72
+13     93861963        rs58459780      G       A       .       PASS    AA=G;DP=124     GT:GQ:DP        0|0:74:24       1|0:100:28      0|1:100:75
+15     44105252        rs12438889      A       C       .       PASS    AA=a;DP=113     GT:GQ:DP        0|0:74:24       1|0:100:29      0|1:100:62
+12     51343035        .       C       T       .       PASS    AA=C;DP=136     GT:GQ:DP        0|0:74:24       1|0:100:29      0|1:100:83
+4      162504864       .       C       T       .       PASS    AA=C;DP=140     GT:GQ:DP        0|0:74:24       1|0:100:30      0|1:100:40
+12     78562261        rs8176823       C       T       .       PASS    AA=T;DP=103     GT:GQ:DP        0|0:74:24       1|0:100:30      0|1:100:49
+1      231562420       .       C       T       .       PASS    AA=C;DP=118     GT:GQ:DP        0|0:74:24       1|0:100:30      0|1:100:67
+10     113309192       rs17129011      C       G       .       PASS    AA=C;DP=145     GT:GQ:DP        0|0:74:24       1|0:100:30      0|1:100:73
+11     10279147        rs59168644      A       G       .       PASS    AA=A;DP=139     GT:GQ:DP        0|0:74:24       1|0:100:30      0|1:100:86
+7      149938286       rs13225610      G       A       .       PASS    AA=N;DP=118     GT:GQ:DP        0|0:74:24       1|0:100:31      0|1:100:60
+10     10519979        .       C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        0|0:74:24       1|0:100:31      0|1:100:67
+2      67093574        rs60640373      C       T       .       PASS    AA=C;DP=134     GT:GQ:DP        0|0:74:24       1|0:100:31      0|1:100:79
+13     76111186        rs6562962       C       T       .       PASS    AA=C;DP=145     GT:GQ:DP        0|0:74:24       1|0:100:32      0|1:100:87
+12     47277258        .       C       T       .       PASS    AA=C;DP=118     GT:GQ:DP        0|0:74:24       1|0:100:33      0|1:100:60
+7      71451929        .       A       C       .       PASS    AA=A;DP=128     GT:GQ:DP        0|0:74:24       1|0:100:34      0|1:100:69
+1      210937704       rs3768547       T       A       .       PASS    AA=T;DP=149;HM2;HM3     GT:GQ:DP        0|0:74:24       1|0:100:34      0|1:100:89
+6      41453104        rs57437999      A       G       .       PASS    AA=A;DP=123     GT:GQ:DP        0|0:74:24       1|0:100:36      0|1:100:63
+10     78870878        .       C       T       .       PASS    AA=T;DP=74      GT:GQ:DP        0|0:74:24       1|0:21:7        0|1:100:34
+4      85181677        rs1921877       T       C       .       PASS    AA=T;DP=107     GT:GQ:DP        0|0:74:24       1|0:29:10       0|1:100:71
+12     108756282       rs10850830      C       T       .       PASS    AA=C;DP=136     GT:GQ:DP        0|0:74:24       1|0:48:23       0|1:100:49
+1      30630768        rs6425968       C       T       .       PASS    AA=C;DP=125;HM2 GT:GQ:DP        0|0:74:24       1|0:53:12       0|1:100:88
+20     38430228        rs6016336       G       T       .       PASS    AA=T;DP=88      GT:GQ:DP        0|0:74:24       1|0:54:12       0|1:100:51
+15     49756134        .       G       A       .       PASS    AA=G;DP=116     GT:GQ:DP        0|0:74:24       1|0:55:17       0|1:100:75
+13     113232447       .       A       T       .       PASS    AA=A;DP=106     GT:GQ:DP        0|0:74:24       1|0:57:17       0|1:100:67
+19     21614170        .       C       T       .       PASS    AA=-;DP=69      GT:GQ:DP        0|0:74:24       1|0:64:10       0|1:100:35
+6      153688079       rs2035269       T       C       .       PASS    AA=t;DP=90      GT:GQ:DP        0|0:74:24       1|0:64:14       0|1:100:51
+11     125062969       .       G       A       .       PASS    AA=G;DP=139     GT:GQ:DP        0|0:74:24       1|0:66:14       0|1:100:99
+17     69600450        rs59741515      C       T       .       PASS    AA=A;DP=104     GT:GQ:DP        0|0:74:24       1|0:67:15       0|1:100:64
+2      240772535       rs7606242       T       C       .       PASS    AA=C;DP=126     GT:GQ:DP        0|0:74:24       1|0:67:16       0|1:100:82
+21     23248205        rs55650809      A       G       .       PASS    AA=A;DP=89      GT:GQ:DP        0|0:74:24       1|0:69:17       0|1:100:46
+22     31924844        .       T       A       .       PASS    AA=T;DP=78      GT:GQ:DP        0|0:74:24       1|0:70:13       0|1:100:30
+12     40588045        rs35196631      T       C       .       PASS    AA=T;DP=107     GT:GQ:DP        0|0:74:24       1|0:70:22       0|1:100:59
+4      151697722       rs7699721       T       C       .       PASS    AA=T;DP=102     GT:GQ:DP        0|0:74:24       1|0:71:24       0|1:100:54
+8      111838467       .       A       T       .       PASS    AA=A;DP=98      GT:GQ:DP        0|0:74:24       1|0:74:21       0|1:100:52
+6      4593009 rs4960011       C       A       .       PASS    AA=C;DP=80      GT:GQ:DP        0|0:74:24       1|0:74:9        0|1:100:38
+10     119946299       rs11198307      A       G       .       PASS    AA=T;DP=101     GT:GQ:DP        0|0:74:24       1|0:76:22       0|1:100:52
+19     48611330        .       G       A       .       PASS    AA=G;DP=93      GT:GQ:DP        0|0:74:24       1|0:80:12       0|1:100:58
+1      207042334       rs1166913       C       T       .       PASS    AA=C;DP=103     GT:GQ:DP        0|0:74:24       1|0:80:17       0|1:100:63
+16     84033269        .       C       T       .       PASS    AA=C;DP=122     GT:GQ:DP        0|0:74:24       1|0:81:16       0|1:100:84
+6      54739659        .       C       T       .       PASS    AA=C;DP=103     GT:GQ:DP        0|0:74:24       1|0:81:23       0|1:100:56
+17     2540482 .       C       A       .       PASS    AA=C;DP=86      GT:GQ:DP        0|0:74:24       1|0:81:6        0|1:100:55
+2      219750871       rs10193576      A       C       .       PASS    AA=A;DP=112     GT:GQ:DP        0|0:74:24       1|0:82:16       0|1:100:71
+10     35127536        .       A       T       .       PASS    AA=A;DP=94      GT:GQ:DP        0|0:74:24       1|0:82:24       0|1:100:42
+18     37799870        rs61095714      G       T       .       PASS    AA=G;DP=104     GT:GQ:DP        0|0:74:24       1|0:82:24       0|1:100:56
+5      117648519       .       G       A       .       PASS    AA=A;DP=99      GT:GQ:DP        0|0:74:24       1|0:83:18       0|1:100:57
+13     27464573        .       G       C       .       PASS    AA=g;DP=85      GT:GQ:DP        0|0:74:24       1|0:84:11       0|1:100:50
+5      11198902        rs28660065      C       T       .       PASS    AA=C;DP=137     GT:GQ:DP        0|0:74:24       1|0:85:12       0|1:100:102
+5      159168393       rs6864684       A       G       .       PASS    AA=G;DP=111     GT:GQ:DP        0|0:74:24       1|0:85:19       0|1:100:69
+5      147152545       rs59728215      G       C       .       PASS    AA=G;DP=101     GT:GQ:DP        0|0:74:24       1|0:86:18       0|1:100:47
+10     1584334 rs7070465       T       C       .       PASS    AA=t;DP=106     GT:GQ:DP        0|0:74:24       1|0:88:11       0|1:100:71
+9      88540913        rs10046800      T       C       .       PASS    AA=T;DP=112     GT:GQ:DP        0|0:74:24       1|0:88:16       0|1:100:76
+1      176219421       .       G       A       .       PASS    AA=G;DP=108     GT:GQ:DP        0|0:74:24       1|0:88:26       0|1:100:58
+10     114796978       .       A       C       .       PASS    AA=A;DP=101     GT:GQ:DP        0|0:74:24       1|0:89:15       0|1:100:61
+5      11771624        rs34663602      C       T       .       PASS    AA=C;DP=104     GT:GQ:DP        0|0:74:24       1|0:89:18       0|1:100:64
+7      152577536       rs1404560       C       T       .       PASS    AA=T;DP=120     GT:GQ:DP        0|0:74:24       1|0:92:15       0|1:100:80
+17     58670693        .       G       A       .       PASS    AA=G;DP=99      GT:GQ:DP        0|0:74:24       1|0:92:16       0|1:100:55
+8      129953341       rs13276570      T       C       .       PASS    AA=T;DP=121     GT:GQ:DP        0|0:74:24       1|0:92:24       0|1:100:71
+10     99966601        rs12773466      A       G       .       PASS    AA=A;DP=84      GT:GQ:DP        0|0:74:24       1|0:94:15       0|1:100:36
+1      157156031       rs856095        G       T       .       PASS    AA=G;DP=128     GT:GQ:DP        0|0:74:24       1|0:94:20       0|1:100:85
+3      120795221       .       C       T       .       PASS    AA=C;DP=113     GT:GQ:DP        0|0:74:24       1|0:95:18       0|1:100:68
+5      179455335       rs10075114      T       C       .       PASS    AA=t;DP=117     GT:GQ:DP        0|0:74:24       1|0:95:21       0|1:100:75
+6      71877387        rs60573258      T       G       .       PASS    AA=T;DP=120     GT:GQ:DP        0|0:74:24       1|0:95:26       0|1:100:65
+5      30840197        .       C       T       .       PASS    AA=C;DP=87      GT:GQ:DP        0|0:74:24       1|0:96:12       0|1:100:40
+18     28818638        rs9958315       T       C       .       PASS    AA=T;DP=91      GT:GQ:DP        0|0:74:24       1|0:96:13       0|1:100:41
+15     88116282        .       A       T       .       PASS    AA=A;DP=104     GT:GQ:DP        0|0:74:24       1|0:96:16       0|1:100:66
+9      4287421 rs10814918      A       C       .       PASS    AA=A;DP=105     GT:GQ:DP        0|0:74:24       1|0:97:17       0|1:100:63
+5      155208529       rs12518602      G       A       .       PASS    AA=G;DP=85      GT:GQ:DP        0|0:74:24       1|0:98:15       0|1:100:45
+2      80329256        rs378076        C       T       .       PASS    AA=T;DP=101     GT:GQ:DP        0|0:74:24       1|0:98:18       0|1:100:60
+11     31086644        rs7125218       T       C       .       PASS    AA=T;DP=99      GT:GQ:DP        0|0:74:24       1|0:98:23       0|1:100:51
+14     86141900        rs11850102      G       A       .       PASS    AA=G;DP=113     GT:GQ:DP        0|0:74:25       0|1:100:13      0|0:100:75
+4      39157238        rs10030706      G       A       .       PASS    AA=G;DP=87      GT:GQ:DP        0|0:74:25       0|1:100:15      0|0:100:37
+5      25777446        rs255029        C       T       .       PASS    AA=T;DP=103     GT:GQ:DP        0|0:74:25       0|1:100:17      0|0:100:62
+10     10074886        rs7923520       A       T       .       PASS    AA=A;DP=107     GT:GQ:DP        0|0:74:25       0|1:100:19      0|0:100:62
+2      13870070        rs2053730       G       A       .       PASS    AA=G;DP=113     GT:GQ:DP        0|0:74:25       0|1:100:19      0|0:100:70
+19     291700  rs882572        C       T       .       PASS    AA=c;DP=122     GT:GQ:DP        0|0:74:25       0|1:100:22      0|0:100:75
+15     98571841        .       G       A       .       PASS    AA=G;DP=120     GT:GQ:DP        0|0:74:25       0|1:100:26      0|0:100:68
+12     84608439        .       G       A       .       PASS    AA=g;DP=127     GT:GQ:DP        0|0:74:25       0|1:100:31      0|0:100:72
+7      54461298        .       T       A       .       PASS    AA=T;DP=96      GT:GQ:DP        0|0:74:25       1|0:100:14      0|1:100:45
+7      132573908       .       A       T       .       PASS    AA=A;DP=92      GT:GQ:DP        0|0:74:25       1|0:100:14      0|1:100:54
+8      110699833       rs11992637      A       C       .       PASS    AA=A;DP=98      GT:GQ:DP        0|0:74:25       1|0:100:14      0|1:100:58
+4      118613059       rs17861959      G       A       .       PASS    AA=G;DP=114     GT:GQ:DP        0|0:74:25       1|0:100:15      0|1:100:74
+7      88938425        rs2214052       T       A       .       PASS    AA=A;DP=91      GT:GQ:DP        0|0:74:25       1|0:100:16      0|1:100:38
+13     39397640        rs7329046       A       G       .       PASS    AA=G;DP=87      GT:GQ:DP        0|0:74:25       1|0:100:16      0|1:100:47
+2      169850351       .       C       T       .       PASS    AA=T;DP=105     GT:GQ:DP        0|0:74:25       1|0:100:16      0|1:100:63
+1      18344838        rs9729212       A       G       .       PASS    AA=a;DP=96      GT:GQ:DP        0|0:74:25       1|0:100:17      0|1:100:48
+12     7690853 rs7307260       G       A       .       PASS    AA=A;DP=108     GT:GQ:DP        0|0:74:25       1|0:100:17      0|1:100:63
+9      132554096       .       C       A       .       PASS    AA=C;DP=96      GT:GQ:DP        0|0:74:25       1|0:100:18      0|1:100:54
+14     23040683        rs4982764       T       C       .       PASS    AA=T;DP=117     GT:GQ:DP        0|0:74:25       1|0:100:18      0|1:100:75
+14     52152301        rs11157924      T       C       .       PASS    AA=T;DP=73      GT:GQ:DP        0|0:74:25       1|0:100:19      0|1:100:20
+17     66445326        rs11077531      A       G       .       PASS    AA=A;DP=85      GT:GQ:DP        0|0:74:25       1|0:100:19      0|1:100:28
+17     24414624        rs7219977       A       G       .       PASS    AA=A;DP=82      GT:GQ:DP        0|0:74:25       1|0:100:19      0|1:100:29
+5      11496831        rs2895595       A       T       .       PASS    AA=A;DP=84      GT:GQ:DP        0|0:74:25       1|0:100:19      0|1:100:40
+12     113028100       rs12314948      T       C       .       PASS    AA=C;DP=119     GT:GQ:DP        0|0:74:25       1|0:100:19      0|1:100:77
+13     31063065        rs60997562      T       C       .       PASS    AA=t;DP=96      GT:GQ:DP        0|0:74:25       1|0:100:20      0|1:100:49
+5      12296256        rs13156281      T       C       .       PASS    AA=T;DP=115     GT:GQ:DP        0|0:74:25       1|0:100:20      0|1:100:68
+6      120363313       rs17558468      T       C       .       PASS    AA=T;DP=98      GT:GQ:DP        0|0:74:25       1|0:100:21      0|1:100:43
+18     30764829        .       T       C       .       PASS    AA=T;DP=100     GT:GQ:DP        0|0:74:25       1|0:100:21      0|1:100:51
+7      111879123       .       T       A       .       PASS    AA=T;DP=101     GT:GQ:DP        0|0:74:25       1|0:100:21      0|1:100:55
+12     129696152       .       G       A       .       PASS    AA=G;DP=133     GT:GQ:DP        0|0:74:25       1|0:100:21      0|1:100:85
+3      16755484        rs4684297       T       A       .       PASS    AA=T;DP=106     GT:GQ:DP        0|0:74:25       1|0:100:22      0|1:100:59
+8      84221402        .       G       A       .       PASS    AA=G;DP=105     GT:GQ:DP        0|0:74:25       1|0:100:22      0|1:100:59
+12     69823596        rs11178654      T       C       .       PASS    AA=T;DP=130     GT:GQ:DP        0|0:74:25       1|0:100:22      0|1:100:83
+3      10006603        rs13099507      G       A       .       PASS    AA=.;DP=94      GT:GQ:DP        0|0:74:25       1|0:100:23      0|1:100:45
+5      13609523        rs58849172      T       A       .       PASS    AA=T;DP=97      GT:GQ:DP        0|0:74:25       1|0:100:23      0|1:100:50
+7      88625476        rs17308505      G       A       .       PASS    AA=A;DP=125     GT:GQ:DP        0|0:74:25       1|0:100:23      0|1:100:77
+4      98084409        .       C       A       .       PASS    AA=C;DP=127     GT:GQ:DP        0|0:74:25       1|0:100:23      0|1:100:78
+17     45222400        .       C       T       .       PASS    AA=C;DP=138     GT:GQ:DP        0|0:74:25       1|0:100:24      0|1:100:48
+20     49741773        rs6013257       G       A       .       PASS    AA=A;DP=128     GT:GQ:DP        0|0:74:25       1|0:100:24      0|1:100:82
+21     18342875        rs9978670       T       C       .       PASS    AA=T;DP=105     GT:GQ:DP        0|0:74:25       1|0:100:25      0|1:100:55
+9      79498034        rs10114263      C       T       .       PASS    AA=C;DP=112     GT:GQ:DP        0|0:74:25       1|0:100:25      0|1:100:60
+11     42011867        rs57038549      A       G       .       PASS    AA=G;DP=95      GT:GQ:DP        0|0:74:25       1|0:100:26      0|1:100:45
+11     90184312        rs10501741      C       T       .       PASS    AA=C;DP=106     GT:GQ:DP        0|0:74:25       1|0:100:26      0|1:100:57
+5      19555570        rs2934213       T       C       .       PASS    AA=T;DP=110     GT:GQ:DP        0|0:74:25       1|0:100:26      0|1:100:59
+1      95554220        rs11165373      G       A       .       PASS    AA=G;DP=147;HM2;HM3     GT:GQ:DP        0|0:74:25       1|0:100:27      0|1:100:95
+17     3053256 rs11870026      G       C       .       PASS    AA=G;DP=124     GT:GQ:DP        0|0:74:25       1|0:100:28      0|1:100:69
+9      121526431       rs10984659      C       G       .       PASS    AA=C;DP=128     GT:GQ:DP        0|0:74:25       1|0:100:28      0|1:100:74
+17     28960409        rs1434593       G       A       .       PASS    AA=G;DP=149     GT:GQ:DP        0|0:74:25       1|0:100:30      0|1:100:54
+8      122358148       .       G       A       .       PASS    AA=A;DP=116     GT:GQ:DP        0|0:74:25       1|0:100:30      0|1:100:59
+17     50527870        rs2787498       T       C       .       PASS    AA=T;DP=125     GT:GQ:DP        0|0:74:25       1|0:100:30      0|1:100:69
+11     126107458       rs7114947       C       G       .       PASS    AA=C;DP=130     GT:GQ:DP        0|0:74:25       1|0:100:30      0|1:100:74
+10     55480380        .       T       C       .       PASS    AA=t;DP=108     GT:GQ:DP        0|0:74:25       1|0:100:31      0|1:100:53
+1      26327555        rs61776596      T       C       .       PASS    AA=C;DP=134     GT:GQ:DP        0|0:74:25       1|0:100:32      0|1:100:79
+11     50470172        rs4562853       A       G       .       PASS    AA=.;DP=142     GT:GQ:DP        0|0:74:25       1|0:100:34      0|1:100:86
+12     57162116        rs7973831       A       T       .       PASS    AA=A;DP=136     GT:GQ:DP        0|0:74:25       1|0:100:36      0|1:100:76
+12     1882364 rs11513705      A       G       .       PASS    AA=A;DP=103     GT:GQ:DP        0|0:74:25       1|0:100:37      0|1:100:43
+16     2693868 .       G       A       .       PASS    AA=G;DP=97      GT:GQ:DP        0|0:74:25       1|0:14:12       0|1:100:64
+19     1354870 .       G       A       .       PASS    AA=A;DP=97      GT:GQ:DP        0|0:74:25       1|0:22:10       0|1:100:66
+2      237239334       rs7607587       G       A       .       PASS    AA=A;DP=105     GT:GQ:DP        0|0:74:25       1|0:24:17       0|1:100:62
+12     49914189        rs60852569      A       G       .       PASS    AA=A;DP=91      GT:GQ:DP        0|0:74:25       1|0:34:9        0|1:100:59
+17     58863952        rs57728995      C       T       .       PASS    AA=T;DP=125     GT:GQ:DP        0|0:74:25       1|0:46:24       0|1:100:76
+18     7163388 rs9949050       A       G       .       PASS    AA=t;DP=92      GT:GQ:DP        0|0:74:25       1|0:46:9        0|1:100:58
+3      176671389       rs2161043       C       A       .       PASS    AA=A;DP=104     GT:GQ:DP        0|0:74:25       1|0:47:18       0|1:100:59
+1      9808149 .       G       A       .       PASS    AA=G;DP=78      GT:GQ:DP        0|0:74:25       1|0:59:9        0|1:100:32
+22     28492544        .       T       C       .       PASS    AA=T;DP=125     GT:GQ:DP        0|0:74:25       1|0:60:16       0|1:100:85
+15     91331419        rs11634566      G       A       .       PASS    AA=G;DP=110     GT:GQ:DP        0|0:74:25       1|0:60:18       0|1:100:70
+4      141476664       rs11943754      A       G       .       PASS    AA=G;DP=94      GT:GQ:DP        0|0:74:25       1|0:64:22       0|1:100:49
+1      30662640        rs12407723      T       C       .       PASS    AA=T;DP=113;HM2;HM3     GT:GQ:DP        0|0:74:25       1|0:65:12       0|1:100:76
+2      34949277        .       C       T       .       PASS    AA=T;DP=72      GT:GQ:DP        0|0:74:25       1|0:68:14       0|1:100:22
+1      112151180       rs17028612      G       A       .       PASS    AA=G;DP=118;HM2;HM3     GT:GQ:DP        0|0:74:25       1|0:69:18       0|1:100:75
+13     92374369        rs1465752       C       T       .       PASS    AA=T;DP=91      GT:GQ:DP        0|0:74:25       1|0:80:15       0|1:100:53
+3      14541923        rs7610941       C       T       .       PASS    AA=C;DP=118     GT:GQ:DP        0|0:74:25       1|0:82:17       0|1:100:73
+1      195372159       rs2151134       T       G       .       PASS    AA=G;DP=78;HM2  GT:GQ:DP        0|0:74:25       1|0:87:16       0|1:100:37
+4      143981674       rs28521209      G       A       .       PASS    AA=G;DP=86      GT:GQ:DP        0|0:74:25       1|0:88:17       0|1:100:44
+16     76828299        rs11639653      C       G       .       PASS    AA=C;DP=117     GT:GQ:DP        0|0:74:25       1|0:88:17       0|1:100:76
+6      156078743       .       C       T       .       PASS    AA=C;DP=103     GT:GQ:DP        0|0:74:25       1|0:90:12       0|1:100:65
+8      118860929       rs28881469      C       T       .       PASS    AA=C;DP=82      GT:GQ:DP        0|0:74:25       1|0:90:13       0|1:100:45
+17     29290147        .       C       G       .       PASS    AA=C;DP=85      GT:GQ:DP        0|0:74:25       1|0:92:8        0|1:100:39
+15     51991198        rs11857259      G       C       .       PASS    AA=G;DP=112     GT:GQ:DP        0|0:74:25       1|0:95:23       0|1:100:65
+5      98145365        rs331550        G       A       .       PASS    AA=A;DP=150     GT:GQ:DP        0|0:74:25       1|0:96:22       0|1:100:57
+3      55144067        rs61298647      C       T       .       PASS    AA=c;DP=90      GT:GQ:DP        0|0:74:25       1|0:97:20       0|1:100:38
+13     107358473       .       G       A       .       PASS    AA=G;DP=108     GT:GQ:DP        0|0:74:25       1|0:97:22       0|1:100:52
+1      87863898        .       T       G       .       PASS    AA=T;DP=120     GT:GQ:DP        0|0:74:25       1|0:98:14       0|1:100:40
+9      87293080        rs12342204      G       A       .       PASS    AA=t;DP=122     GT:GQ:DP        0|0:74:25       1|0:98:24       0|1:100:75
+7      117746378       rs4727864       G       C       .       PASS    AA=G;DP=105     GT:GQ:DP        0|0:74:26       0|1:100:22      0|0:100:53
+2      175322187       .       A       G       .       PASS    AA=A;DP=120     GT:GQ:DP        0|0:74:26       0|1:100:25      0|0:100:70
+16     61761651        .       C       G       .       PASS    AA=C;DP=105     GT:GQ:DP        0|0:74:26       1|0:100:18      0|1:100:62
+7      48226224        .       G       A       .       PASS    AA=G;DP=98      GT:GQ:DP        0|0:74:26       1|0:100:21      0|1:100:50
+11     123895344       rs10790692      A       G       .       PASS    AA=A;DP=114     GT:GQ:DP        0|0:74:26       1|0:100:21      0|1:100:69
+11     80503139        rs1522662       G       C       .       PASS    AA=C;DP=127     GT:GQ:DP        0|0:74:26       1|0:100:23      0|1:100:77
+3      28062056        .       G       A       .       PASS    AA=G;DP=108     GT:GQ:DP        0|0:74:26       1|0:100:26      0|1:100:57
+11     113562482       rs58331538      T       C       .       PASS    AA=T;DP=135     GT:GQ:DP        0|0:74:26       1|0:100:30      0|1:100:81
+22     44595888        .       C       G       .       PASS    AA=C;DP=65      GT:GQ:DP        0|0:74:26       1|0:35:10       0|1:100:22
+1      15904636        .       C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        0|0:74:26       1|0:57:20       0|1:100:64
+4      107710417       rs1879774       C       T       .       PASS    AA=C;DP=80      GT:GQ:DP        0|0:74:26       1|0:68:10       0|1:100:32
+2      197945389       .       A       G       .       PASS    AA=G;DP=98      GT:GQ:DP        0|0:74:26       1|0:76:19       0|1:100:53
+14     37380357        rs10151474      G       A       .       PASS    AA=G;DP=111     GT:GQ:DP        0|0:74:26       1|0:84:24       0|1:100:57
+19     56163702        .       C       T       .       PASS    AA=C;DP=131     GT:GQ:DP        0|0:74:26       1|0:88:19       0|1:100:46
+2      190677108       rs11674449      C       T       .       PASS    AA=C;DP=105     GT:GQ:DP        0|0:74:26       1|0:96:21       0|1:100:59
+19     20353732        .       T       C       .       PASS    AA=-;DP=91      GT:GQ:DP        0|0:74:26       1|0:97:12       0|1:100:53
+2      61678654        rs7574637       T       A       .       PASS    AA=T;DP=109     GT:GQ:DP        0|0:74:27       1|0:100:15      0|1:100:67
+8      143666631       rs4977095       T       C       .       PASS    AA=C;DP=84      GT:GQ:DP        0|0:74:27       1|0:100:17      0|1:100:32
+1      159340959       rs4656982       A       G       .       PASS    AA=G;DP=103     GT:GQ:DP        0|0:74:27       1|0:100:17      0|1:100:60
+7      98638081        rs12705036      G       C       .       PASS    AA=G;DP=128     GT:GQ:DP        0|0:74:27       1|0:100:22      0|1:100:79
+13     90504207        .       C       T       .       PASS    AA=C;DP=127     GT:GQ:DP        0|0:74:27       1|0:100:27      0|1:100:71
+6      135632833       .       G       A       .       PASS    AA=G;DP=109     GT:GQ:DP        0|0:74:27       1|0:81:22       0|1:100:56
+13     21371390        rs60702399      A       T       .       PASS    AA=A;DP=118     GT:GQ:DP        0|0:74:27       1|0:90:12       0|1:100:74
+22     41020206        rs5758701       A       G       .       PASS    AA=A;DP=92      GT:GQ:DP        0|0:74:28       1|0:69:14       0|1:100:41
+15     97130377        rs2175795       A       G       .       PASS    AA=A;DP=119     GT:GQ:DP        0|0:74:29       0|1:100:28      0|0:100:64
+4      163877899       rs9992425       T       G       .       PASS    AA=T;DP=128     GT:GQ:DP        0|0:74:29       0|1:100:30      0|0:100:65
+16     12566187        rs12932393      C       G       .       PASS    AA=G;DP=137     GT:GQ:DP        0|0:74:29       1|0:96:24       0|1:100:86
+1      30520598        .       C       G       .       PASS    AA=G;DP=120     GT:GQ:DP        0|0:74:30       0|1:100:15      0|0:100:76
+2      236925833       .       C       T       .       PASS    AA=C;DP=107     GT:GQ:DP        0|0:74:30       0|1:100:16      0|0:100:60
+1      145068466       .       G       A       .       PASS    AA=G;DP=103     GT:GQ:DP        0|0:74:30       0|1:100:24      0|0:100:44
+14     104918922       rs7158718       A       G       .       PASS    AA=A;DP=102     GT:GQ:DP        0|0:74:30       1|0:71:16       0|1:100:48
+4      187266988       rs13106718      T       C       .       PASS    AA=T;DP=125     GT:GQ:DP        0|0:74:30       1|0:74:21       0|1:100:75
+11     43782171        rs6485465       G       A       .       PASS    AA=G;DP=144     GT:GQ:DP        0|0:74:31       0|1:100:33      0|0:100:80
+1      112877390       rs11102490      T       G       .       PASS    AA=T;DP=115;HM2;HM3     GT:GQ:DP        0|0:74:31       1|0:100:18      0|1:100:67
+16     9204766 .       C       G       .       PASS    AA=C;DP=137     GT:GQ:DP        0|0:74:31       1|0:100:24      0|1:100:84
+13     102770132       rs11069512      A       G       .       PASS    AA=A;DP=99      GT:GQ:DP        0|0:74:31       1|0:100:25      0|1:100:40
+2      70570503        .       T       G       .       PASS    AA=T;DP=133     GT:GQ:DP        0|0:74:32       0|1:100:20      0|0:100:81
+1      155627669       .       C       G       .       PASS    AA=C;DP=145     GT:GQ:DP        0|0:74:32       0|1:100:25      0|0:100:90
+4      106916504       .       T       C       .       PASS    AA=T;DP=136     GT:GQ:DP        0|0:74:32       1|0:100:18      0|1:100:85
+4      47419582        rs2352144       T       A       .       PASS    AA=A;DP=114     GT:GQ:DP        0|0:74:32       1|0:100:26      0|1:100:56
+15     69369845        rs1878055       G       A       .       PASS    AA=A;DP=132     GT:GQ:DP        0|0:74:32       1|1:49:21       0|1:100:29
+2      233795417       rs13025632      T       C       .       PASS    AA=T;DP=142     GT:GQ:DP        0|0:74:33       1|0:100:28      0|1:100:82
+4      188205920       rs13126526      G       A       .       PASS    AA=A;DP=126     GT:GQ:DP        0|0:74:33       1|0:23:27       0|1:100:66
+14     91758064        rs1465125       C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        0|0:74:33       1|0:29:17       0|1:100:45
+14     95190487        .       A       G       .       PASS    AA=G;DP=118     GT:GQ:DP        0|0:74:33       1|0:78:17       0|1:100:66
+10     125601674       rs28413513      A       G       .       PASS    AA=G;DP=112     GT:GQ:DP        0|0:74:33       1|0:90:9        0|1:100:70
+22     47445992        rs9617490       T       C       .       PASS    AA=C;DP=129     GT:GQ:DP        0|0:74:34       1|1:37:14       0|1:100:86
+13     109231183       .       T       G       .       PASS    AA=T;DP=125     GT:GQ:DP        0|0:74:34       1|1:46:17       0|1:100:75
+19     16043970        .       T       G       .       PASS    AA=.;DP=114     GT:GQ:DP        0|0:74:35       1|0:100:21      0|1:100:58
+2      213741882       rs1441171       G       T       .       PASS    AA=T;DP=154     GT:GQ:DP        0|0:74:35       1|0:100:38      0|1:100:83
+5      179692619       rs7727934       C       T       .       PASS    AA=C;DP=93      GT:GQ:DP        0|0:74:35       1|0:68:11       0|1:100:39
+6      138945630       rs7738494       T       A       .       PASS    AA=T;DP=144     GT:GQ:DP        0|0:74:36       1|1:55:22       0|1:100:86
+13     30664762        .       A       G       .       PASS    AA=A;DP=148     GT:GQ:DP        0|0:74:39       0|1:100:21      0|0:100:89
+10     25223253        .       A       G       .       PASS    AA=A;DP=101     GT:GQ:DP        0|0:75:25       1|1:15:24       0|1:100:54
+9      71539619        .       A       G       .       PASS    AA=A;DP=90      GT:GQ:DP        0|0:75:25       1|1:17:18       0|1:100:45
+6      110511591       .       T       G       .       PASS    AA=T;DP=95      GT:GQ:DP        0|0:75:25       1|1:17:22       0|1:100:38
+2      45045584        rs12712928      G       C       .       PASS    AA=C;DP=96      GT:GQ:DP        0|0:75:25       1|1:22:9        0|1:100:63
+11     24037723        rs12361319      T       C       .       PASS    AA=.;DP=117     GT:GQ:DP        0|0:75:25       1|1:23:14       0|1:100:75
+4      94340336        .       A       G       .       PASS    AA=A;DP=101     GT:GQ:DP        0|0:75:25       1|1:25:11       0|1:100:66
+3      167217648       rs9834374       G       C       .       PASS    AA=G;DP=110     GT:GQ:DP        0|0:75:25       1|1:25:25       0|1:100:62
+9      107473610       rs9694985       A       T       .       PASS    AA=T;DP=95      GT:GQ:DP        0|0:75:25       1|1:28:11       0|1:100:57
+10     1855535 .       A       G       .       PASS    AA=a;DP=109     GT:GQ:DP        0|0:75:25       1|1:31:13       0|1:100:70
+11     86464435        rs2512393       T       C       .       PASS    AA=C;DP=94      GT:GQ:DP        0|0:75:25       1|1:31:23       0|1:100:37
+7      70913764        .       T       A       .       PASS    AA=A;DP=88      GT:GQ:DP        0|0:75:25       1|1:33:20       0|1:100:45
+11     90945829        rs2514278       T       C       .       PASS    AA=T;DP=101     GT:GQ:DP        0|0:75:25       1|1:33:24       0|1:100:48
+4      7044912 rs7655773       G       T       .       PASS    AA=G;DP=104     GT:GQ:DP        0|0:75:25       1|1:34:13       0|1:100:66
+7      49124331        rs10233024      G       A       .       PASS    AA=G;DP=119     GT:GQ:DP        0|0:75:25       1|1:34:22       0|1:100:73
+3      156313215       .       A       G       .       PASS    AA=A;DP=117     GT:GQ:DP        0|0:75:25       1|1:40:15       0|1:100:81
+6      27550226        rs2064093       A       G       .       PASS    AA=A;DP=122     GT:GQ:DP        0|0:75:25       1|1:43:16       0|1:100:39
+1      175686450       rs11800296      T       C       .       PASS    AA=T;DP=94;HM2  GT:GQ:DP        0|0:75:25       1|1:43:16       0|1:100:55
+7      62018420        rs2196998       G       A       .       PASS    AA=.;DP=96      GT:GQ:DP        0|0:75:25       1|1:43:16       0|1:100:56
+12     102840797       rs58470973      C       T       .       PASS    AA=C;DP=94      GT:GQ:DP        0|0:75:25       1|1:43:17       0|1:100:42
+10     36608659        rs1668770       A       T       .       PASS    AA=T;DP=105     GT:GQ:DP        0|0:75:25       1|1:46:17       0|1:100:65
+18     325316  rs2012143       A       C       .       PASS    AA=A;DP=125     GT:GQ:DP        0|0:75:25       1|1:47:23       0|1:100:78
+16     51370713        .       G       A       .       PASS    AA=G;DP=103     GT:GQ:DP        0|0:75:25       1|1:49:18       0|1:100:61
+16     52830097        .       G       T       .       PASS    AA=G;DP=96      GT:GQ:DP        0|0:75:25       1|1:49:19       0|1:100:54
+5      118981418       rs184497        T       C       .       PASS    AA=T;DP=112     GT:GQ:DP        0|0:75:25       1|1:49:19       0|1:100:55
+12     18297651        rs4405372       G       A       .       PASS    AA=A;DP=107     GT:GQ:DP        0|0:75:25       1|1:50:26       0|1:100:57
+10     18548430        rs2026324       C       G       .       PASS    AA=C;DP=106     GT:GQ:DP        0|0:75:25       1|1:52:19       0|1:100:64
+17     67760020        .       T       C       .       PASS    AA=T;DP=151     GT:GQ:DP        0|0:75:25       1|1:54:25       0|1:100:44
+8      141989937       rs4961301       A       G       .       PASS    AA=G;DP=136     GT:GQ:DP        0|0:75:25       1|1:54:26       0|1:100:88
+6      104498666       rs11753184      A       G       .       PASS    AA=G;DP=118     GT:GQ:DP        0|0:75:25       1|1:55:21       0|1:100:75
+11     110545847       rs532132        A       C       .       PASS    AA=A;DP=117     GT:GQ:DP        0|0:75:25       1|1:56:27       0|1:100:66
+2      239635297       rs895808        A       C       .       PASS    AA=C;DP=97      GT:GQ:DP        0|0:75:25       1|1:58:21       0|1:100:50
+2      126486008       rs10496653      A       G       .       PASS    AA=A;DP=104     GT:GQ:DP        0|0:75:25       1|1:58:21       0|1:100:58
+21     14613981        rs2822568       C       T       .       PASS    AA=C;DP=109     GT:GQ:DP        0|0:75:25       1|1:58:21       0|1:100:65
+6      116556013       rs60491506      A       G       .       PASS    AA=A;DP=122     GT:GQ:DP        0|0:75:25       1|1:58:21       0|1:100:76
+11     26025704        rs7114213       C       T       .       PASS    AA=T;DP=101     GT:GQ:DP        0|0:75:25       1|1:58:22       0|1:100:54
+3      60521804        rs181001        A       C       .       PASS    AA=A;DP=103     GT:GQ:DP        0|0:75:25       1|1:64:23       0|1:100:55
+4      165833489       rs6536845       G       T       .       PASS    AA=G;DP=112     GT:GQ:DP        0|0:75:25       1|1:64:23       0|1:100:63
+4      106106969       rs1388035       C       T       .       PASS    AA=T;DP=93      GT:GQ:DP        0|0:75:25       1|1:64:24       0|1:100:45
+18     21019768        .       G       A       .       PASS    AA=A;DP=103     GT:GQ:DP        0|0:75:25       1|1:64:24       0|1:100:55
+7      10936992        rs28482126      T       C       .       PASS    AA=T;DP=127     GT:GQ:DP        0|0:75:25       1|1:64:28       0|1:100:72
+2      192633232       rs10185068      A       G       .       PASS    AA=G;DP=97      GT:GQ:DP        0|0:75:25       1|1:67:24       0|1:100:37
+7      88848092        rs705373        T       C       .       PASS    AA=C;DP=119     GT:GQ:DP        0|0:75:25       1|1:70:25       0|1:100:68
+1      205724768       rs12021671      A       G       .       PASS    AA=A;DP=113;HM2;HM3     GT:GQ:DP        0|0:75:25       1|1:76:27       0|1:100:59
+11     87978439        rs10831155      T       C       .       PASS    AA=T;DP=119     GT:GQ:DP        0|0:75:25       1|1:76:29       0|1:100:64
+15     92170533        rs947689        G       C       .       PASS    AA=G;DP=117     GT:GQ:DP        0|0:75:25       1|1:77:32       0|1:100:47
+2      18391239        .       A       G       .       PASS    AA=A;DP=135     GT:GQ:DP        0|0:75:25       1|1:82:29       0|1:100:81
+4      165194141       rs6536782       G       A       .       PASS    AA=G;DP=128     GT:GQ:DP        0|0:75:25       1|1:88:32       0|1:100:74
+12     67787482        .       C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        0|0:75:26       1|1:22:16       0|1:100:81
+9      77931413        rs7041746       T       C       .       PASS    AA=N;DP=128     GT:GQ:DP        0|0:75:26       1|1:31:23       0|1:100:82
+1      90312401        rs2813747       T       G       .       PASS    AA=G;DP=134;HM2;HM3     GT:GQ:DP        0|0:75:26       1|1:33:24       0|1:100:86
+17     58101923        rs28561415      T       C       .       PASS    AA=C;DP=92      GT:GQ:DP        0|0:75:26       1|1:37:14       0|1:100:53
+6      168527421       rs28622953      T       C       .       PASS    AA=C;DP=100     GT:GQ:DP        0|0:75:26       1|1:40:15       0|1:100:60
+5      140093102       .       A       G       .       PASS    AA=G;DP=103     GT:GQ:DP        0|0:75:26       1|1:41:15       0|1:100:62
+8      19613769        rs7815576       G       A       .       PASS    AA=A;DP=114     GT:GQ:DP        0|0:75:26       1|1:49:19       0|1:100:70
+2      215933462       .       C       G       .       PASS    AA=C;DP=112     GT:GQ:DP        0|0:75:26       1|1:52:19       0|1:100:30
+18     34244556        rs9807544       A       G       .       PASS    AA=A;DP=106     GT:GQ:DP        0|0:75:26       1|1:52:19       0|1:100:61
+2      20112749        rs1398951       G       C       .       PASS    AA=C;DP=130     GT:GQ:DP        0|0:75:26       1|1:52:20       0|1:100:72
+3      171227648       rs9861394       C       T       .       PASS    AA=T;DP=116     GT:GQ:DP        0|0:75:26       1|1:55:21       0|1:100:29
+11     90383158        rs58303076      T       C       .       PASS    AA=T;DP=102     GT:GQ:DP        0|0:75:26       1|1:55:22       0|1:100:55
+12     5984905 rs216810        T       C       .       PASS    AA=C;DP=72      GT:GQ:DP        0|0:75:26       1|1:5:7 0|1:100:28
+5      111153026       rs931684        A       G       .       PASS    AA=A;DP=101     GT:GQ:DP        0|0:75:26       1|1:61:22       0|1:100:53
+7      90388127        rs10953026      G       A       .       PASS    AA=G;DP=123     GT:GQ:DP        0|0:75:26       1|1:63:27       0|1:100:70
+2      229770949       rs11899948      A       C       .       PASS    AA=A;DP=99      GT:GQ:DP        0|0:75:26       1|1:64:23       0|1:100:39
+11     15909653        rs2615017       G       A       .       PASS    AA=G;DP=103     GT:GQ:DP        0|0:75:26       1|1:64:23       0|1:100:44
+8      26987154        rs11991342      C       T       .       PASS    AA=C;DP=103     GT:GQ:DP        0|0:75:26       1|1:64:23       0|1:100:53
+6      167447087       rs6909252       C       T       .       PASS    AA=T;DP=100     GT:GQ:DP        0|0:75:26       1|1:67:24       0|1:100:50
+4      47915596        rs2664035       G       A       .       PASS    AA=A;DP=120     GT:GQ:DP        0|0:75:26       1|1:73:26       0|1:100:69
+4      75435978        rs7673295       T       G       .       PASS    AA=T;DP=106     GT:GQ:DP        0|0:75:26       1|1:79:28       0|1:100:54
+10     79429180        rs11813485      T       A       .       PASS    AA=a;DP=129     GT:GQ:DP        0|0:75:27       0|1:100:28      0|0:100:79
+3      73154932        rs6780186       A       G       .       PASS    AA=A;DP=102     GT:GQ:DP        0|0:75:27       1|1:31:15       0|1:100:59
+3      44051199        rs7653170       T       A       .       PASS    AA=T;DP=115     GT:GQ:DP        0|0:75:27       1|1:61:22       0|1:100:64
+17     9814870 rs3826529       G       A       .       PASS    AA=G;DP=127     GT:GQ:DP        0|0:75:27       1|1:70:26       0|1:100:74
+X      3376680 rs12398538      G       A       .       PASS    AA=G;DP=127     GT:GQ:DP        0|0:75:27       1|1:79:28       0|1:100:47
+16     10675812        rs8059727       C       G       .       PASS    AA=C;DP=94      GT:GQ:DP        0|0:75:27       1|1:8:7 0|1:100:49
+9      138604967       rs7021438       T       C       .       PASS    AA=C;DP=138     GT:GQ:DP        0|0:75:28       1|0:75:13       0|1:100:93
+20     3597721 rs628977        T       C       .       PASS    AA=T;DP=101     GT:GQ:DP        0|0:75:28       1|0:84:16       0|1:100:54
+7      109853790       .       C       T       .       PASS    AA=C;DP=104     GT:GQ:DP        0|0:75:29       0|1:100:17      0|0:100:58
+16     12961383        rs11647732      G       A       .       PASS    AA=A;DP=123     GT:GQ:DP        0|0:75:29       0|1:100:29      0|0:100:60
+19     38006190        .       G       T       .       PASS    AA=G;DP=126     GT:GQ:DP        0|0:75:30       0|1:100:18      0|0:100:79
+3      32419683        rs9856939       A       T       .       PASS    AA=T;DP=117     GT:GQ:DP        0|0:75:30       1|0:100:20      0|1:100:68
+6      88310514        .       G       T       .       PASS    AA=G;DP=109     GT:GQ:DP        0|0:75:30       1|0:100:22      0|1:100:56
+9      16573989        rs7866527       T       C       .       PASS    AA=T;DP=103     GT:GQ:DP        0|0:75:30       1|0:97:16       0|1:100:59
+8      142945716       rs11167097      A       G       .       PASS    AA=G;DP=144     GT:GQ:DP        0|0:75:31       0|1:100:22      0|0:100:88
+3      69918874        .       C       T       .       PASS    AA=C;DP=143     GT:GQ:DP        0|0:75:31       0|1:100:26      0|0:100:74
+8      97605346        .       T       C       .       PASS    AA=T;DP=113     GT:GQ:DP        0|0:75:31       1|0:100:18      0|1:100:64
+8      102867173       rs16868430      G       T       .       PASS    AA=G;DP=132     GT:GQ:DP        0|0:75:31       1|0:100:37      0|1:100:64
+4      10765036        .       C       T       .       PASS    AA=C;DP=130     GT:GQ:DP        0|0:75:32       0|1:100:22      0|0:100:76
+1      96025509        .       G       A       .       PASS    AA=G;DP=127     GT:GQ:DP        0|0:75:32       1|0:100:24      0|1:100:73
+5      30291182        rs11744231      A       C       .       PASS    AA=A;DP=129     GT:GQ:DP        0|0:75:33       0|1:100:19      0|0:100:39
+2      105991057       rs1647672       T       C       .       PASS    AA=T;DP=146     GT:GQ:DP        0|0:75:33       1|0:100:31      0|1:100:84
+6      63914740        rs1067649       G       T       .       PASS    AA=T;DP=121     GT:GQ:DP        0|0:75:33       1|1:64:23       0|1:100:66
+5      97646636        rs10037270      C       T       .       PASS    AA=T;DP=138     GT:GQ:DP        0|0:75:33       1|1:79:28       0|1:100:81
+20     17824786        .       G       T       .       PASS    AA=G;DP=141     GT:GQ:DP        0|0:75:34       0|1:100:26      0|0:100:80
+15     87385644        .       T       C       .       PASS    AA=T;DP=154     GT:GQ:DP        0|0:75:34       0|1:100:28      0|0:100:91
+5      76035514        rs3822548       T       C       .       PASS    AA=C;DP=112     GT:GQ:DP        0|0:75:35       0|1:100:18      0|0:100:59
+7      19213070        rs10252740      T       C       .       PASS    AA=T;DP=153     GT:GQ:DP        0|0:75:35       0|1:100:19      0|0:100:92
+7      63477251        .       C       T       .       PASS    AA=c;DP=150     GT:GQ:DP        0|0:75:35       0|1:100:20      0|0:100:55
+20     49283438        rs4811140       C       T       .       PASS    AA=c;DP=118     GT:GQ:DP        0|0:75:35       0|1:100:21      0|0:100:52
+15     55047286        .       C       G       .       PASS    AA=C;DP=137     GT:GQ:DP        0|0:75:35       0|1:100:25      0|0:100:39
+1      89139056        rs4284240       A       G       .       PASS    AA=A;DP=133     GT:GQ:DP        0|0:75:35       0|1:100:28      0|0:100:70
+4      56823905        rs484305        A       G       .       PASS    AA=a;DP=155     GT:GQ:DP        0|0:75:35       0|1:100:29      0|0:100:54
+18     31945962        rs1785919       G       A       .       PASS    AA=G;DP=122     GT:GQ:DP        0|0:75:35       0|1:100:31      0|0:100:57
+1      231442955       rs6662453       T       A       .       PASS    AA=T;DP=122;HM2;HM3     GT:GQ:DP        0|0:75:36       1|0:100:15      0|1:100:76
+3      171738200       rs1023599       T       C       .       PASS    AA=T;DP=111     GT:GQ:DP        0|0:75:36       1|0:100:17      0|1:100:60
+16     21079374        rs7194423       A       C       .       PASS    AA=A;DP=99      GT:GQ:DP        0|0:75:36       1|0:100:20      0|1:100:43
+2      81990845        rs55980221      G       A       .       PASS    AA=G;DP=133     GT:GQ:DP        0|0:75:36       1|0:100:20      0|1:100:79
+15     59073793        rs6494242       C       T       .       PASS    AA=C;DP=141     GT:GQ:DP        0|0:75:36       1|0:100:25      0|1:100:41
+10     1555441 .       G       T       .       PASS    AA=G;DP=134     GT:GQ:DP        0|0:75:36       1|0:100:26      0|1:100:69
+1      155217995       rs7532063       T       C       .       PASS    AA=C;DP=118     GT:GQ:DP        0|0:75:36       1|0:68:21       0|1:100:63
+1      164332538       rs10918346      G       T       .       PASS    AA=G;DP=136;HM2 GT:GQ:DP        0|0:75:41       1|1:52:19       0|1:100:76
+5      147206741       .       T       C       .       PASS    AA=T;DP=122     GT:GQ:DP        0|0:76:26       0|1:100:30      0|0:100:68
+7      93568450        rs10238540      T       C       .       PASS    AA=C;DP=94      GT:GQ:DP        0|0:76:26       1|0:79:10       0|1:100:58
+16     84376592        rs437305        C       G       .       PASS    AA=G;DP=103     GT:GQ:DP        0|0:76:26       1|0:79:18       0|1:100:57
+5      154487162       rs7728519       T       A       .       PASS    AA=T;DP=84      GT:GQ:DP        0|0:76:27       1|0:85:10       0|1:100:48
+4      104159326       .       T       A       .       PASS    AA=T;DP=156     GT:GQ:DP        0|0:76:29       0|1:100:27      0|0:100:56
+3      76170032        .       T       G       .       PASS    AA=T;DP=120     GT:GQ:DP        0|0:76:29       1|0:100:20      0|1:100:60
+6      152730656       .       A       G       .       PASS    AA=G;DP=123     GT:GQ:DP        0|0:76:30       0|1:100:26      0|0:100:63
+7      4538459 .       G       A       .       PASS    AA=A;DP=115     GT:GQ:DP        0|0:76:31       0|1:100:23      0|0:100:60
+11     57014655        rs61886990      C       T       .       PASS    AA=C;DP=117     GT:GQ:DP        0|0:76:31       1|0:100:27      0|1:100:60
+6      105721996       rs1190294       A       C       .       PASS    AA=A;DP=115     GT:GQ:DP        0|0:76:31       1|0:100:30      0|1:100:54
+8      95707672        rs10504938      G       A       .       PASS    AA=g;DP=134     GT:GQ:DP        0|0:76:31       1|0:74:24       0|1:100:37
+2      114860588       rs34807581      A       T       .       PASS    AA=T;DP=125     GT:GQ:DP        0|0:76:31       1|1:40:22       0|1:100:72
+2      84325975        rs6547543       A       T       .       PASS    AA=T;DP=127     GT:GQ:DP        0|0:76:31       1|1:76:27       0|1:100:70
+3      52925014        .       C       T       .       PASS    AA=C;DP=124     GT:GQ:DP        0|0:76:32       1|0:100:24      0|1:100:68
+7      1158215 rs7802508       G       A       .       PASS    AA=G;DP=143     GT:GQ:DP        0|0:76:32       1|0:100:27      0|1:100:47
+2      121003264       .       C       T       .       PASS    AA=C;DP=113     GT:GQ:DP        0|0:76:32       1|0:37:16       0|1:100:68
+9      70777355        rs7858081       C       T       .       PASS    AA=C;DP=145     GT:GQ:DP        0|0:76:33       1|0:83:24       0|1:100:91
+9      88915993        rs6559967       G       A       .       PASS    AA=G;DP=136     GT:GQ:DP        0|0:76:34       1|0:100:28      0|1:100:75
+16     308844  .       C       T       .       PASS    AA=c;DP=110     GT:GQ:DP        0|0:76:34       1|0:30:5        0|1:100:67
+10     26872290        rs57673326      A       G       .       PASS    AA=A;DP=105     GT:GQ:DP        0|0:76:35       0|1:100:24      0|0:85:36
+3      261023  rs9813769       A       G       .       PASS    AA=A;DP=164     GT:GQ:DP        0|0:76:37       1|1:100:39      0|1:100:85
+11     69527282        rs11236276      A       G       .       PASS    AA=G;DP=107     GT:GQ:DP        0|0:76:37       1|1:22:20       0|1:100:48
+3      63587064        rs6445376       T       C       .       PASS    AA=T;DP=135     GT:GQ:DP        0|0:76:37       1|1:24:19       0|1:100:76
+20     45560001        .       G       A       .       PASS    AA=G;DP=130     GT:GQ:DP        0|0:76:37       1|1:58:23       0|1:100:69
+4      144037917       .       A       G       .       PASS    AA=A;DP=137     GT:GQ:DP        0|0:77:24       0|1:100:11      0|0:100:96
+17     56159281        rs7221801       A       T       .       PASS    AA=A;DP=97      GT:GQ:DP        0|0:77:24       0|1:100:12      0|0:100:58
+6      153046693       rs2758775       T       A       .       PASS    AA=A;DP=114     GT:GQ:DP        0|0:77:24       0|1:100:12      0|0:100:77
+5      75565974        rs7722224       G       A       .       PASS    AA=G;DP=115     GT:GQ:DP        0|0:77:24       0|1:100:12      0|0:86:37
+13     21445878        rs3129678       A       G       .       PASS    AA=A;DP=139     GT:GQ:DP        0|0:77:24       0|1:100:13      0|0:100:44
+8      84810552        rs13281208      A       C       .       PASS    AA=a;DP=82      GT:GQ:DP        0|0:77:24       0|1:100:13      0|0:100:44
+6      73108204        .       C       A       .       PASS    AA=C;DP=90      GT:GQ:DP        0|0:77:24       0|1:100:13      0|0:100:53
+4      180156912       rs10020897      G       A       .       PASS    AA=G;DP=93      GT:GQ:DP        0|0:77:24       0|1:100:13      0|0:100:58
+2      22101958        rs4665175       G       A       .       PASS    AA=G;DP=102     GT:GQ:DP        0|0:77:24       0|1:100:13      0|0:100:63
+10     15930344        rs6602059       C       G       .       PASS    AA=G;DP=103     GT:GQ:DP        0|0:77:24       0|1:100:14      0|0:100:66
+9      26494261        .       A       G       .       PASS    AA=A;DP=80      GT:GQ:DP        0|0:77:24       0|1:100:15      0|0:100:42
+7      40941616        rs10281585      T       G       .       PASS    AA=T;DP=87      GT:GQ:DP        0|0:77:24       0|1:100:15      0|0:100:50
+17     9088223 .       C       G       .       PASS    AA=C;DP=139     GT:GQ:DP        0|0:77:24       0|1:100:15      0|0:100:57
+17     27636633        rs12950671      A       G       .       PASS    AA=A;DP=104     GT:GQ:DP        0|0:77:24       0|1:100:15      0|0:100:66
+15     86026801        rs4887196       T       C       .       PASS    AA=T;DP=124     GT:GQ:DP        0|0:77:24       0|1:100:15      0|0:100:76
+18     52387322        rs686781        A       G       .       PASS    AA=G;DP=137     GT:GQ:DP        0|0:77:24       0|1:100:16      0|0:100:46
+3      122444081       rs7630139       A       G       .       PASS    AA=A;DP=94      GT:GQ:DP        0|0:77:24       0|1:100:16      0|0:100:53
+8      20527966        .       T       G       .       PASS    AA=T;DP=119     GT:GQ:DP        0|0:77:24       0|1:100:16      0|0:81:27
+2      89899316        .       G       A       .       PASS    AA=.;DP=95      GT:GQ:DP        0|0:77:24       0|1:100:17      0|0:100:53
+15     46994194        rs934741        A       G       .       PASS    AA=G;DP=97      GT:GQ:DP        0|0:77:24       0|1:100:17      0|0:100:54
+3      60805561        rs1900668       C       T       .       PASS    AA=C;DP=102     GT:GQ:DP        0|0:77:24       0|1:100:17      0|0:100:60
+2      41360393        rs10202299      C       T       .       PASS    AA=T;DP=109     GT:GQ:DP        0|0:77:24       0|1:100:17      0|0:100:64
+12     17344708        rs2971173       C       G       .       PASS    AA=C;DP=110     GT:GQ:DP        0|0:77:24       0|1:100:17      0|0:100:71
+15     23131584        rs55988027      T       C       .       PASS    AA=T;DP=114     GT:GQ:DP        0|0:77:24       0|1:100:17      0|0:100:75
+13     18575815        .       G       A       .       PASS    AA=g;DP=92      GT:GQ:DP        0|0:77:24       0|1:100:18      0|0:100:48
+3      123404220       rs4678042       T       A       .       PASS    AA=T;DP=89      GT:GQ:DP        0|0:77:24       0|1:100:18      0|0:100:48
+1      220176103       .       T       C       .       PASS    AA=T;DP=132     GT:GQ:DP        0|0:77:24       0|1:100:18      0|0:100:51
+10     28500243        rs7912085       T       C       .       PASS    AA=T;DP=98      GT:GQ:DP        0|0:77:24       0|1:100:18      0|0:100:57
+22     25128092        rs34723202      T       A       .       PASS    AA=t;DP=100     GT:GQ:DP        0|0:77:24       0|1:100:18      0|0:100:59
+18     12894523        .       T       C       .       PASS    AA=T;DP=107     GT:GQ:DP        0|0:77:24       0|1:100:18      0|0:100:66
+4      109906373       .       G       A       .       PASS    AA=g;DP=113     GT:GQ:DP        0|0:77:24       0|1:100:18      0|0:100:70
+16     11507216        rs8063652       C       T       .       PASS    AA=T;DP=113     GT:GQ:DP        0|0:77:24       0|1:100:18      0|0:84:28
+10     129034052       rs7910546       A       G       .       PASS    AA=G;DP=100     GT:GQ:DP        0|0:77:24       0|1:100:19      0|0:100:44
+8      80357318        .       A       G       .       PASS    AA=A;DP=91      GT:GQ:DP        0|0:77:24       0|1:100:19      0|0:100:45
+8      30306470        rs7833154       G       A       .       PASS    AA=G;DP=96      GT:GQ:DP        0|0:77:24       0|1:100:19      0|0:100:52
+22     33748073        rs2413286       A       G       .       PASS    AA=A;DP=107     GT:GQ:DP        0|0:77:24       0|1:100:19      0|0:100:64
+1      189907959       rs2785776       T       G       .       PASS    AA=T;DP=111;HM2;HM3     GT:GQ:DP        0|0:77:24       0|1:100:19      0|0:100:69
+11     49655895        .       C       T       .       PASS    AA=c;DP=85      GT:GQ:DP        0|0:77:24       0|1:100:19      0|0:87:30
+5      102842200       rs9327882       C       T       .       PASS    AA=T;DP=130     GT:GQ:DP        0|0:77:24       0|1:100:20      0|0:100:40
+18     58087352        rs2939415       A       G       .       PASS    AA=A;DP=92      GT:GQ:DP        0|0:77:24       0|1:100:20      0|0:100:46
+1      85986656        rs2785081       G       A       .       PASS    AA=G;DP=99;HM2  GT:GQ:DP        0|0:77:24       0|1:100:20      0|0:100:55
+16     60077879        .       G       A       .       PASS    AA=G;DP=102     GT:GQ:DP        0|0:77:24       0|1:100:20      0|0:100:59
+1      210024515       .       C       T       .       PASS    AA=C;DP=106     GT:GQ:DP        0|0:77:24       0|1:100:20      0|0:100:61
+7      97221380        .       T       C       .       PASS    AA=T;DP=110     GT:GQ:DP        0|0:77:24       0|1:100:20      0|0:100:64
+7      125959757       rs2283066       T       C       .       PASS    AA=T;DP=114     GT:GQ:DP        0|0:77:24       0|1:100:20      0|0:100:70
+12     70202914        .       G       A       .       PASS    AA=G;DP=116     GT:GQ:DP        0|0:77:24       0|1:100:20      0|0:100:73
+4      67403603        .       C       T       .       PASS    AA=C;DP=118     GT:GQ:DP        0|0:77:24       0|1:100:20      0|0:100:73
+14     75767298        .       C       G       .       PASS    AA=C;DP=122     GT:GQ:DP        0|0:77:24       0|1:100:20      0|0:100:76
+17     76290400        rs35232546      T       C       .       PASS    AA=t;DP=131     GT:GQ:DP        0|0:77:24       0|1:100:20      0|0:100:88
+16     74906498        rs2052866       C       T       .       PASS    AA=c;DP=117     GT:GQ:DP        0|0:77:24       0|1:100:20      0|0:90:30
+10     103087982       .       A       T       .       PASS    AA=T;DP=97      GT:GQ:DP        0|0:77:24       0|1:100:20      0|0:98:40
+18     51040965        rs1261085       T       C       .       PASS    AA=T;DP=101     GT:GQ:DP        0|0:77:24       0|1:100:21      0|0:100:56
+6      28831820        rs9257136       A       C       .       PASS    AA=A;DP=102     GT:GQ:DP        0|0:77:24       0|1:100:21      0|0:100:58
+5      24555504        .       A       C       .       PASS    AA=A;DP=103     GT:GQ:DP        0|0:77:24       0|1:100:21      0|0:100:59
+12     60530066        rs7302585       C       T       .       PASS    AA=C;DP=108     GT:GQ:DP        0|0:77:24       0|1:100:21      0|0:100:64
+10     6986007 rs4607967       C       T       .       PASS    AA=T;DP=112     GT:GQ:DP        0|0:77:24       0|1:100:21      0|0:100:65
+4      23278321        rs306050        C       A       .       PASS    AA=C;DP=114     GT:GQ:DP        0|0:77:24       0|1:100:21      0|0:100:70
+2      137668652       .       T       G       .       PASS    AA=G;DP=112     GT:GQ:DP        0|0:77:24       0|1:100:21      0|0:100:71
+18     68441788        .       A       G       .       PASS    AA=A;DP=121     GT:GQ:DP        0|0:77:24       0|1:100:21      0|0:100:76
+5      8774791 .       G       A       .       PASS    AA=G;DP=100     GT:GQ:DP        0|0:77:24       0|1:100:22      0|0:100:57
+20     7056154 .       G       A       .       PASS    AA=G;DP=111     GT:GQ:DP        0|0:77:24       0|1:100:22      0|0:100:60
+12     72822625        .       C       G       .       PASS    AA=C;DP=109     GT:GQ:DP        0|0:77:24       0|1:100:22      0|0:100:66
+7      26179689        .       A       C       .       PASS    AA=a;DP=117     GT:GQ:DP        0|0:77:24       0|1:100:22      0|0:100:68
+18     5937038 .       G       T       .       PASS    AA=T;DP=113     GT:GQ:DP        0|0:77:24       0|1:100:22      0|0:100:69
+1      201862134       .       G       A       .       PASS    AA=G;DP=117     GT:GQ:DP        0|0:77:24       0|1:100:22      0|0:100:73
+10     93409657        rs11186650      A       G       .       PASS    AA=A;DP=89      GT:GQ:DP        0|0:77:24       0|1:100:23      0|0:100:35
+X      114824782       .       C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        0|0:77:24       0|1:100:23      0|0:100:40
+8      13778621        .       G       A       .       PASS    AA=g;DP=128     GT:GQ:DP        0|0:77:24       0|1:100:23      0|0:100:45
+11     131963343       .       T       A       .       PASS    AA=T;DP=111     GT:GQ:DP        0|0:77:24       0|1:100:23      0|0:100:62
+10     130838111       .       C       T       .       PASS    AA=C;DP=112     GT:GQ:DP        0|0:77:24       0|1:100:23      0|0:100:66
+15     92810281        .       C       T       .       PASS    AA=C;DP=131     GT:GQ:DP        0|0:77:24       0|1:100:23      0|0:100:74
+3      159965514       .       G       A       .       PASS    AA=G;DP=132     GT:GQ:DP        0|0:77:24       0|1:100:23      0|0:100:88
+9      12240170        rs1928863       C       T       .       PASS    AA=T;DP=126     GT:GQ:DP        0|0:77:24       0|1:100:24      0|0:100:34
+11     114286843       .       G       A       .       PASS    AA=A;DP=128     GT:GQ:DP        0|0:77:24       0|1:100:24      0|0:100:36
+8      129704970       rs1003032       G       A       .       PASS    AA=A;DP=146     GT:GQ:DP        0|0:77:24       0|1:100:24      0|0:100:39
+21     19414034        rs2825360       A       G       .       PASS    AA=A;DP=133     GT:GQ:DP        0|0:77:24       0|1:100:24      0|0:100:40
+3      104363899       rs7625155       A       T       .       PASS    AA=A;DP=96      GT:GQ:DP        0|0:77:24       0|1:100:24      0|0:100:47
+14     94007586        .       T       G       .       PASS    AA=T;DP=108     GT:GQ:DP        0|0:77:24       0|1:100:24      0|0:100:62
+3      75188252        .       G       A       .       PASS    AA=A;DP=110     GT:GQ:DP        0|0:77:24       0|1:100:24      0|0:100:62
+14     79473709        .       T       A       .       PASS    AA=T;DP=123     GT:GQ:DP        0|0:77:24       0|1:100:24      0|0:100:73
+13     46919002        .       G       A       .       PASS    AA=A;DP=127     GT:GQ:DP        0|0:77:24       0|1:100:24      0|0:100:81
+8      39175763        .       A       G       .       PASS    AA=A;DP=116     GT:GQ:DP        0|0:77:24       0|1:100:24      0|0:81:28
+1      52751989        .       C       T       .       PASS    AA=C;DP=131     GT:GQ:DP        0|0:77:24       0|1:100:24      0|0:85:33
+4      22336659        rs6840176       T       C       .       PASS    AA=T;DP=86      GT:GQ:DP        0|0:77:24       0|1:100:24      0|0:99:36
+6      100883687       rs6901655       A       G       .       PASS    AA=A;DP=101     GT:GQ:DP        0|0:77:24       0|1:100:25      0|0:100:51
+6      79164914        .       G       A       .       PASS    AA=G;DP=112     GT:GQ:DP        0|0:77:24       0|1:100:25      0|0:100:65
+8      127849466       rs56396136      G       A       .       PASS    AA=A;DP=114     GT:GQ:DP        0|0:77:24       0|1:100:25      0|0:100:65
+8      20643178        .       T       C       .       PASS    AA=T;DP=119     GT:GQ:DP        0|0:77:24       0|1:100:25      0|0:100:71
+4      10207635        rs16870323      T       C       .       PASS    AA=T;DP=129     GT:GQ:DP        0|0:77:24       0|1:100:25      0|0:87:31
+1      89832062        .       C       G       .       PASS    AA=C;DP=126     GT:GQ:DP        0|0:77:24       0|1:100:25      0|0:99:33
+3      109875363       .       G       T       .       PASS    AA=G;DP=112     GT:GQ:DP        0|0:77:24       0|1:100:26      0|0:100:64
+18     56128647        .       T       G       .       PASS    AA=T;DP=120     GT:GQ:DP        0|0:77:24       0|1:100:26      0|0:100:67
+10     123041029       .       C       T       .       PASS    AA=C;DP=118     GT:GQ:DP        0|0:77:24       0|1:100:26      0|0:100:68
+8      103112944       rs6997533       T       C       .       PASS    AA=T;DP=117     GT:GQ:DP        0|0:77:24       0|1:100:27      0|0:100:55
+12     43000043        .       A       C       .       PASS    AA=A;DP=106     GT:GQ:DP        0|0:77:24       0|1:100:27      0|0:100:56
+12     82102668        .       C       T       .       PASS    AA=C;DP=108     GT:GQ:DP        0|0:77:24       0|1:100:27      0|0:100:57
+14     86063310        rs1959794       C       T       .       PASS    AA=C;DP=111     GT:GQ:DP        0|0:77:24       0|1:100:27      0|0:100:60
+16     62125927        .       C       T       .       PASS    AA=C;DP=119     GT:GQ:DP        0|0:77:24       0|1:100:27      0|0:100:68
+16     75638825        .       G       A       .       PASS    AA=G;DP=120     GT:GQ:DP        0|0:77:24       0|1:100:27      0|0:100:70
+1      243868743       .       C       A       .       PASS    AA=C;DP=124     GT:GQ:DP        0|0:77:24       0|1:100:27      0|0:100:73
+21     42286578        .       G       T       .       PASS    AA=G;DP=128     GT:GQ:DP        0|0:77:24       0|1:100:27      0|0:100:79
+8      106559432       .       T       G       .       PASS    AA=T;DP=121     GT:GQ:DP        0|0:77:24       0|1:100:27      0|0:87:30
+4      34600448        rs9918082       A       G       .       PASS    AA=A;DP=144     GT:GQ:DP        0|0:77:24       0|1:100:28      0|0:100:49
+10     16868190        .       T       A       .       PASS    AA=T;DP=146     GT:GQ:DP        0|0:77:24       0|1:100:28      0|0:100:51
+9      123182143       rs9650747       T       G       .       PASS    AA=T;DP=119     GT:GQ:DP        0|0:77:24       0|1:100:28      0|0:100:57
+12     75876947        .       A       G       .       PASS    AA=A;DP=118     GT:GQ:DP        0|0:77:24       0|1:100:28      0|0:100:68
+10     78076561        rs2579772       A       G       .       PASS    AA=A;DP=115     GT:GQ:DP        0|0:77:24       0|1:100:29      0|0:100:61
+2      68060274        rs17034786      A       G       .       PASS    AA=A;DP=126     GT:GQ:DP        0|0:77:24       0|1:100:29      0|0:100:74
+12     7876727 rs17728008      T       C       .       PASS    AA=t;DP=138     GT:GQ:DP        0|0:77:24       0|1:100:29      0|0:100:77
+11     111686323       .       A       G       .       PASS    AA=A;DP=135     GT:GQ:DP        0|0:77:24       0|1:100:30      0|0:100:78
+18     13840672        rs1940902       A       G       .       PASS    AA=G;DP=134     GT:GQ:DP        0|0:77:24       0|1:100:30      0|0:100:82
+2      107088903       .       T       C       .       PASS    AA=t;DP=158     GT:GQ:DP        0|0:77:24       0|1:100:31      0|0:100:47
+3      127216424       .       T       C       .       PASS    AA=t;DP=160     GT:GQ:DP        0|0:77:24       0|1:100:32      0|0:100:55
+4      163090856       .       T       C       .       PASS    AA=T;DP=120     GT:GQ:DP        0|0:77:24       0|1:100:32      0|0:100:62
+11     21567605        rs898364        A       G       .       PASS    AA=A;DP=164     GT:GQ:DP        0|0:77:24       0|1:100:33      0|0:100:61
+14     84129376        .       C       T       .       PASS    AA=T;DP=81      GT:GQ:DP        0|0:77:25       0|1:100:13      0|0:100:43
+4      42022362        .       G       T       .       PASS    AA=G;DP=97      GT:GQ:DP        0|0:77:25       0|1:100:15      0|0:100:56
+11     54995694        rs11827799      C       T       .       PASS    AA=.;DP=98      GT:GQ:DP        0|0:77:25       0|1:100:15      0|0:100:57
+8      118471136       rs2023138       C       A       .       PASS    AA=C;DP=106     GT:GQ:DP        0|0:77:25       0|1:100:15      0|0:100:70
+1      26185965        .       G       A       .       PASS    AA=G;DP=86      GT:GQ:DP        0|0:77:25       0|1:100:18      0|0:100:43
+4      39071565        .       G       A       .       PASS    AA=G;DP=112     GT:GQ:DP        0|0:77:25       0|1:100:18      0|0:100:70
+2      81208694        rs62152392      G       T       .       PASS    AA=G;DP=125     GT:GQ:DP        0|0:77:25       0|1:100:18      0|0:100:83
+15     45901567        rs55759819      T       C       .       PASS    AA=T;DP=130     GT:GQ:DP        0|0:77:25       0|1:100:19      0|0:100:41
+6      87084866        rs7772098       G       A       .       PASS    AA=.;DP=84      GT:GQ:DP        0|0:77:25       0|1:100:19      0|0:100:41
+9      17239911        rs10962944      T       A       .       PASS    AA=t;DP=112     GT:GQ:DP        0|0:77:25       0|1:100:19      0|0:84:28
+6      33941293        rs4711357       G       A       .       PASS    AA=G;DP=143     GT:GQ:DP        0|0:77:25       0|1:100:20      0|0:100:48
+13     36008168        rs7985746       C       T       .       PASS    AA=C;DP=99      GT:GQ:DP        0|0:77:25       0|1:100:20      0|0:100:55
+3      155551702       .       C       T       .       PASS    AA=C;DP=104     GT:GQ:DP        0|0:77:25       0|1:100:21      0|0:100:60
+1      7303889 .       C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        0|0:77:25       0|1:100:21      0|0:100:64
+13     71273723        rs303935        A       C       .       PASS    AA=A;DP=119     GT:GQ:DP        0|0:77:25       0|1:100:22      0|0:100:74
+9      93161633        .       T       C       .       PASS    AA=T;DP=107     GT:GQ:DP        0|0:77:25       0|1:100:23      0|0:100:59
+10     20264196        rs12258421      G       A       .       PASS    AA=G;DP=115     GT:GQ:DP        0|0:77:25       0|1:100:23      0|0:100:66
+17     12109634        .       A       G       .       PASS    AA=A;DP=117     GT:GQ:DP        0|0:77:25       0|1:100:24      0|0:100:68
+13     100472945       .       T       C       .       PASS    AA=T;DP=133     GT:GQ:DP        0|0:77:25       0|1:100:24      0|0:100:87
+15     99336333        .       A       G       .       PASS    AA=A;DP=119     GT:GQ:DP        0|0:77:25       0|1:100:24      0|0:90:30
+3      29625717        .       C       T       .       PASS    AA=C;DP=111     GT:GQ:DP        0|0:77:25       0|1:100:25      0|0:100:61
+10     95555781        .       C       T       .       PASS    AA=C;DP=119     GT:GQ:DP        0|0:77:25       0|1:100:25      0|0:100:68
+10     59734313        rs2590292       T       C       .       PASS    AA=C;DP=121     GT:GQ:DP        0|0:77:25       0|1:100:25      0|0:100:73
+4      108185948       rs452493        G       A       .       PASS    AA=G;DP=124     GT:GQ:DP        0|0:77:25       0|1:100:25      0|0:100:75
+3      149508927       .       A       G       .       PASS    AA=A;DP=132     GT:GQ:DP        0|0:77:25       0|1:100:25      0|0:100:79
+6      162526467       rs6915212       A       G       .       PASS    AA=A;DP=123     GT:GQ:DP        0|0:77:25       0|1:100:26      0|0:100:74
+1      106036761       rs790976        G       A       .       PASS    AA=G;DP=125;HM2 GT:GQ:DP        0|0:77:25       0|1:100:28      0|0:100:72
+11     24133825        rs10834291      G       T       .       PASS    AA=g;DP=138     GT:GQ:DP        0|0:77:25       0|1:100:28      0|0:100:81
+12     84567749        .       G       A       .       PASS    AA=G;DP=125     GT:GQ:DP        0|0:77:25       0|1:100:30      0|0:100:71
+10     15519122        rs7079961       T       C       .       PASS    AA=C;DP=130     GT:GQ:DP        0|0:77:25       0|1:100:30      0|0:80:33
+11     22957806        rs11026872      A       T       .       PASS    AA=A;DP=118     GT:GQ:DP        0|0:77:25       0|1:100:32      0|0:100:57
+6      33865025        rs4713682       G       C       .       PASS    AA=G;DP=81      GT:GQ:DP        0|0:77:25       0|1:100:9       0|0:100:48
+6      117081927       .       C       T       .       PASS    AA=C;DP=75      GT:GQ:DP        0|0:77:25       1|0:100:10      0|1:100:39
+3      193409180       .       G       T       .       PASS    AA=G;DP=99      GT:GQ:DP        0|0:77:25       1|0:100:14      0|1:100:59
+17     27919309        .       C       T       .       PASS    AA=C;DP=90      GT:GQ:DP        0|0:77:25       1|0:100:15      0|1:100:50
+5      174304208       rs60068402      G       C       .       PASS    AA=G;DP=89      GT:GQ:DP        0|0:77:25       1|0:100:15      0|1:100:51
+12     41889973        .       T       A       .       PASS    AA=T;DP=94      GT:GQ:DP        0|0:77:25       1|0:100:16      0|1:100:54
+17     40472721        .       C       A       .       PASS    AA=c;DP=99      GT:GQ:DP        0|0:77:25       1|0:100:16      0|1:100:59
+4      115094860       rs2888770       A       T       .       PASS    AA=A;DP=105     GT:GQ:DP        0|0:77:25       1|0:100:16      0|1:100:62
+8      4723404 .       G       C       .       PASS    AA=G;DP=102     GT:GQ:DP        0|0:77:25       1|0:100:16      0|1:100:62
+11     3995632 rs11030639      A       G       .       PASS    AA=G;DP=102     GT:GQ:DP        0|0:77:25       1|0:100:16      0|1:100:63
+10     42305680        rs1855451       C       G       .       PASS    AA=-;DP=111     GT:GQ:DP        0|0:77:25       1|0:100:16      0|1:100:66
+8      9501830 rs11993506      A       C       .       PASS    AA=A;DP=120     GT:GQ:DP        0|0:77:25       1|0:100:16      0|1:100:70
+7      157957239       rs1670352       C       G       .       PASS    AA=C;DP=117     GT:GQ:DP        0|0:77:25       1|0:100:16      0|1:100:77
+2      241091399       rs10198074      T       C       .       PASS    AA=T;DP=124     GT:GQ:DP        0|0:77:25       1|0:100:16      0|1:100:89
+5      169680751       rs7728849       T       C       .       PASS    AA=T;DP=139     GT:GQ:DP        0|0:77:25       1|0:100:17      0|1:100:47
+2      142664493       rs12618743      C       T       .       PASS    AA=C;DP=94      GT:GQ:DP        0|0:77:25       1|0:100:17      0|1:100:55
+8      391493  rs6651443       T       C       .       PASS    AA=T;DP=105     GT:GQ:DP        0|0:77:25       1|0:100:17      0|1:100:63
+2      209841505       rs2197594       C       T       .       PASS    AA=T;DP=108     GT:GQ:DP        0|0:77:25       1|0:100:17      0|1:100:64
+10     100971005       rs17111288      T       G       .       PASS    AA=T;DP=112     GT:GQ:DP        0|0:77:25       1|0:100:17      0|1:100:70
+2      27670050        .       T       C       .       PASS    AA=T;DP=117     GT:GQ:DP        0|0:77:25       1|0:100:17      0|1:100:76
+1      54866157        rs12752131      T       C       .       PASS    AA=C;DP=126     GT:GQ:DP        0|0:77:25       1|0:100:17      0|1:100:79
+11     55740115        .       A       C       .       PASS    AA=A;DP=79      GT:GQ:DP        0|0:77:25       1|0:100:18      0|1:100:24
+7      96000761        rs7776689       T       C       .       PASS    AA=C;DP=96      GT:GQ:DP        0|0:77:25       1|0:100:18      0|1:100:51
+5      51415023        rs6892151       C       T       .       PASS    AA=C;DP=100     GT:GQ:DP        0|0:77:25       1|0:100:18      0|1:100:54
+4      176846950       .       T       C       .       PASS    AA=t;DP=107     GT:GQ:DP        0|0:77:25       1|0:100:18      0|1:100:66
+16     25489430        .       T       G       .       PASS    AA=T;DP=117     GT:GQ:DP        0|0:77:25       1|0:100:18      0|1:100:70
+16     86641784        .       G       T       .       PASS    AA=T;DP=113     GT:GQ:DP        0|0:77:25       1|0:100:18      0|1:100:70
+20     31760786        .       C       T       .       PASS    AA=C;DP=121     GT:GQ:DP        0|0:77:25       1|0:100:18      0|1:100:77
+10     60581651        .       A       G       .       PASS    AA=A;DP=95      GT:GQ:DP        0|0:77:25       1|0:100:19      0|1:100:46
+3      150107517       rs4352341       G       A       .       PASS    AA=A;DP=115     GT:GQ:DP        0|0:77:25       1|0:100:19      0|1:100:46
+1      237934007       rs2278643       A       G       .       PASS    AA=A;DP=99      GT:GQ:DP        0|0:77:25       1|0:100:19      0|1:100:55
+2      155110235       rs59242339      C       T       .       PASS    AA=C;DP=108     GT:GQ:DP        0|0:77:25       1|0:100:19      0|1:100:57
+22     28194760        .       C       T       .       PASS    AA=C;DP=106     GT:GQ:DP        0|0:77:25       1|0:100:19      0|1:100:60
+9      13436110        .       G       C       .       PASS    AA=G;DP=107     GT:GQ:DP        0|0:77:25       1|0:100:19      0|1:100:65
+6      29335096        rs2024679       G       A       .       PASS    AA=G;DP=111     GT:GQ:DP        0|0:77:25       1|0:100:19      0|1:100:69
+15     61038607        .       A       G       .       PASS    AA=A;DP=117     GT:GQ:DP        0|0:77:25       1|0:100:19      0|1:100:75
+15     62580670        rs576926        A       G       .       PASS    AA=A;DP=119     GT:GQ:DP        0|0:77:25       1|0:100:19      0|1:100:75
+10     70508475        rs7082033       T       A       .       PASS    AA=A;DP=118     GT:GQ:DP        0|0:77:25       1|0:100:19      0|1:100:77
+6      39683331        .       G       A       .       PASS    AA=G;DP=74      GT:GQ:DP        0|0:77:25       1|0:100:20      0|1:100:26
+3      49956064        rs34771612      A       G       .       PASS    AA=A;DP=99      GT:GQ:DP        0|0:77:25       1|0:100:20      0|1:100:54
+6      118139581       .       T       G       .       PASS    AA=T;DP=105     GT:GQ:DP        0|0:77:25       1|0:100:20      0|1:100:61
+21     27441703        rs2830727       G       A       .       PASS    AA=G;DP=106     GT:GQ:DP        0|0:77:25       1|0:100:20      0|1:100:63
+10     23389208        .       G       T       .       PASS    AA=g;DP=108     GT:GQ:DP        0|0:77:25       1|0:100:20      0|1:100:64
+5      8833100 rs2963395       C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        0|0:77:25       1|0:100:20      0|1:100:64
+14     29765470        rs9322850       A       C       .       PASS    AA=A;DP=111     GT:GQ:DP        0|0:77:25       1|0:100:20      0|1:100:67
+7      85467187        rs28481371      C       A       .       PASS    AA=c;DP=115     GT:GQ:DP        0|0:77:25       1|0:100:20      0|1:100:69
+7      108697870       rs6466272       C       A       .       PASS    AA=A;DP=123     GT:GQ:DP        0|0:77:25       1|0:100:20      0|1:100:78
+9      131230402       .       G       T       .       PASS    AA=g;DP=107     GT:GQ:DP        0|0:77:25       1|0:100:20      0|1:47:62
+6      32785213        .       G       T       .       PASS    AA=g;DP=90      GT:GQ:DP        0|0:77:25       1|0:100:21      0|1:100:31
+18     36477833        rs10853473      A       G       .       PASS    AA=G;DP=102     GT:GQ:DP        0|0:77:25       1|0:100:21      0|1:100:57
+12     72992781        .       T       C       .       PASS    AA=T;DP=105     GT:GQ:DP        0|0:77:25       1|0:100:21      0|1:100:58
+3      54964998        .       A       G       .       PASS    AA=A;DP=107     GT:GQ:DP        0|0:77:25       1|0:100:21      0|1:100:62
+14     56847932        rs1889721       T       C       .       PASS    AA=C;DP=110     GT:GQ:DP        0|0:77:25       1|0:100:21      0|1:100:65
+3      42108756        rs4538349       C       T       .       PASS    AA=C;DP=112     GT:GQ:DP        0|0:77:25       1|0:100:21      0|1:100:67
+10     102809534       rs57565489      A       C       .       PASS    AA=A;DP=122     GT:GQ:DP        0|0:77:25       1|0:100:21      0|1:100:78
+12     114317374       rs10774810      A       G       .       PASS    AA=A;DP=113     GT:GQ:DP        0|0:77:25       1|0:100:22      0|1:100:67
+18     4057428 .       T       C       .       PASS    AA=T;DP=116     GT:GQ:DP        0|0:77:25       1|0:100:22      0|1:100:69
+2      7894410 rs1641655       G       C       .       PASS    AA=G;DP=117     GT:GQ:DP        0|0:77:25       1|0:100:22      0|1:100:69
+8      2761955 rs12543482      T       A       .       PASS    AA=T;DP=118     GT:GQ:DP        0|0:77:25       1|0:100:22      0|1:100:70
+8      134535961       rs760330        T       C       .       PASS    AA=T;DP=131     GT:GQ:DP        0|0:77:25       1|0:100:22      0|1:100:86
+10     4878553 rs7921112       G       T       .       PASS    AA=G;DP=143     GT:GQ:DP        0|0:77:25       1|0:100:22      0|1:100:93
+5      8532970 rs11957219      T       A       .       PASS    AA=T;DP=88      GT:GQ:DP        0|0:77:25       1|0:100:23      0|1:100:36
+7      12479311        rs12669909      C       G       .       PASS    AA=C;DP=129     GT:GQ:DP        0|0:77:25       1|0:100:23      0|1:100:39
+21     45866059        rs4819134       T       A       .       PASS    AA=T;DP=109     GT:GQ:DP        0|0:77:25       1|0:100:23      0|1:100:47
+20     58209577        rs640852        G       A       .       PASS    AA=A;DP=104     GT:GQ:DP        0|0:77:25       1|0:100:23      0|1:100:56
+14     75357471        .       C       A       .       PASS    AA=C;DP=108     GT:GQ:DP        0|0:77:25       1|0:100:23      0|1:100:59
+9      74761627        rs61615283      A       G       .       PASS    AA=A;DP=106     GT:GQ:DP        0|0:77:25       1|0:100:23      0|1:100:59
+21     38507679        rs2836192       A       G       .       PASS    AA=A;DP=106     GT:GQ:DP        0|0:77:25       1|0:100:23      0|1:100:60
+8      6580296 rs7825917       C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        0|0:77:25       1|0:100:23      0|1:100:60
+9      135338340       .       A       G       .       PASS    AA=A;DP=114     GT:GQ:DP        0|0:77:25       1|0:100:23      0|1:100:64
+3      173786939       .       G       T       .       PASS    AA=T;DP=114     GT:GQ:DP        0|0:77:25       1|0:100:23      0|1:100:65
+3      169159924       rs12107967      A       G       .       PASS    AA=A;DP=112     GT:GQ:DP        0|0:77:25       1|0:100:23      0|1:100:66
+8      37123860        .       G       C       .       PASS    AA=G;DP=137     GT:GQ:DP        0|0:77:25       1|0:100:23      0|1:100:84
+15     70583016        .       C       T       .       PASS    AA=C;DP=142     GT:GQ:DP        0|0:77:25       1|0:100:23      0|1:100:91
+5      18114572        rs606186        A       G       .       PASS    AA=A;DP=127     GT:GQ:DP        0|0:77:25       1|0:100:24      0|1:100:40
+1      208130940       rs10863795      A       C       .       PASS    AA=A;DP=105;HM2;HM3     GT:GQ:DP        0|0:77:25       1|0:100:24      0|1:100:53
+10     110250364       rs17124654      G       A       .       PASS    AA=g;DP=105     GT:GQ:DP        0|0:77:25       1|0:100:24      0|1:100:57
+4      84208434        rs10471050      C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        0|0:77:25       1|0:100:24      0|1:100:60
+8      43809429        .       G       A       .       PASS    AA=.;DP=110     GT:GQ:DP        0|0:77:25       1|0:100:24      0|1:100:63
+18     34457265        rs9964572       A       C       .       PASS    AA=C;DP=112     GT:GQ:DP        0|0:77:25       1|0:100:24      0|1:100:64
+2      201805770       rs34224214      C       T       .       PASS    AA=C;DP=114     GT:GQ:DP        0|0:77:25       1|0:100:24      0|1:100:65
+21     14642429        rs8128871       C       T       .       PASS    AA=C;DP=125     GT:GQ:DP        0|0:77:25       1|0:100:24      0|1:100:67
+13     38775858        .       A       T       .       PASS    AA=A;DP=120     GT:GQ:DP        0|0:77:25       1|0:100:24      0|1:100:70
+2      38915584        rs3099992       A       T       .       PASS    AA=A;DP=118     GT:GQ:DP        0|0:77:25       1|0:100:24      0|1:100:70
+5      117175223       .       G       A       .       PASS    AA=G;DP=128     GT:GQ:DP        0|0:77:25       1|0:100:24      0|1:100:75
+20     21309161        .       T       C       .       PASS    AA=T;DP=124     GT:GQ:DP        0|0:77:25       1|0:100:24      0|1:100:76
+5      152351069       .       A       G       .       PASS    AA=A;DP=127     GT:GQ:DP        0|0:77:25       1|0:100:24      0|1:100:82
+16     6701354 .       G       T       .       PASS    AA=G;DP=135     GT:GQ:DP        0|0:77:25       1|0:100:24      0|1:100:88
+13     91603206        .       A       T       .       PASS    AA=A;DP=90      GT:GQ:DP        0|0:77:25       1|0:100:25      0|1:100:40
+18     27170953        rs1154850       A       G       .       PASS    AA=A;DP=94      GT:GQ:DP        0|0:77:25       1|0:100:25      0|1:100:43
+10     99592991        rs17108583      T       C       .       PASS    AA=T;DP=146     GT:GQ:DP        0|0:77:25       1|0:100:25      0|1:100:55
+4      105374  rs56036594      C       T       .       PASS    AA=C;DP=104     GT:GQ:DP        0|0:77:25       1|0:100:25      0|1:100:55
+5      161363824       rs59910044      A       C       .       PASS    AA=A;DP=108     GT:GQ:DP        0|0:77:25       1|0:100:25      0|1:100:57
+3      112609668       .       C       T       .       PASS    AA=C;DP=113     GT:GQ:DP        0|0:77:25       1|0:100:25      0|1:100:61
+10     132363570       rs11017407      C       G       .       PASS    AA=C;DP=111     GT:GQ:DP        0|0:77:25       1|0:100:25      0|1:100:62
+5      79483341        .       C       T       .       PASS    AA=C;DP=119     GT:GQ:DP        0|0:77:25       1|0:100:25      0|1:100:63
+8      87142793        rs12156243      C       T       .       PASS    AA=C;DP=114     GT:GQ:DP        0|0:77:25       1|0:100:25      0|1:100:63
+21     21468343        .       A       G       .       PASS    AA=A;DP=112     GT:GQ:DP        0|0:77:25       1|0:100:25      0|1:100:64
+2      52317279        .       T       C       .       PASS    AA=C;DP=117     GT:GQ:DP        0|0:77:25       1|0:100:25      0|1:100:68
+8      14481820        .       A       G       .       PASS    AA=A;DP=123     GT:GQ:DP        0|0:77:25       1|0:100:25      0|1:100:71
+8      88106150        .       G       A       .       PASS    AA=A;DP=126     GT:GQ:DP        0|0:77:25       1|0:100:25      0|1:100:78
+6      31396564        rs2844591       T       C       .       PASS    AA=t;DP=110     GT:GQ:DP        0|0:77:25       1|0:100:26      0|1:100:58
+3      59883542        .       G       T       .       PASS    AA=G;DP=116     GT:GQ:DP        0|0:77:25       1|0:100:26      0|1:100:63
+6      63806988        .       T       C       .       PASS    AA=T;DP=118     GT:GQ:DP        0|0:77:25       1|0:100:26      0|1:100:66
+7      8699241 rs17153989      T       C       .       PASS    AA=T;DP=124     GT:GQ:DP        0|0:77:25       1|0:100:26      0|1:100:73
+8      17517326        rs62498051      C       T       .       PASS    AA=C;DP=127     GT:GQ:DP        0|0:77:25       1|0:100:26      0|1:100:77
+2      128912495       rs58662654      C       T       .       PASS    AA=c;DP=127     GT:GQ:DP        0|0:77:25       1|0:100:26      0|1:100:79
+16     81701761        .       G       A       .       PASS    AA=G;DP=141     GT:GQ:DP        0|0:77:25       1|0:100:26      0|1:100:89
+8      5868790 rs12545850      T       C       .       PASS    AA=N;DP=101     GT:GQ:DP        0|0:77:25       1|0:100:27      0|1:100:39
+7      52848323        rs1590123       A       C       .       PASS    AA=A;DP=91      GT:GQ:DP        0|0:77:25       1|0:100:27      0|1:100:42
+10     44651763        .       A       G       .       PASS    AA=A;DP=103     GT:GQ:DP        0|0:77:25       1|0:100:27      0|1:100:50
+16     60650500        .       A       G       .       PASS    AA=G;DP=112     GT:GQ:DP        0|0:77:25       1|0:100:27      0|1:100:58
+3      25062781        rs4484159       A       G       .       PASS    AA=A;DP=112     GT:GQ:DP        0|0:77:25       1|0:100:27      0|1:100:61
+5      33981894        .       C       T       .       PASS    AA=C;DP=116     GT:GQ:DP        0|0:77:25       1|0:100:27      0|1:100:67
+8      1978137 rs4876239       G       T       .       PASS    AA=G;DP=139     GT:GQ:DP        0|0:77:25       1|0:100:27      0|1:100:72
+2      134313099       rs61295528      C       T       .       PASS    AA=C;DP=125     GT:GQ:DP        0|0:77:25       1|0:100:27      0|1:100:74
+5      19241847        rs10061524      C       T       .       PASS    AA=C;DP=128     GT:GQ:DP        0|0:77:25       1|0:100:27      0|1:100:75
+12     26757919        rs60508516      C       G       .       PASS    AA=C;DP=117     GT:GQ:DP        0|0:77:25       1|0:100:28      0|1:100:63
+6      23790409        rs9358652       A       G       .       PASS    AA=A;DP=118     GT:GQ:DP        0|0:77:25       1|0:100:28      0|1:100:65
+15     58152486        rs57971700      A       G       .       PASS    AA=A;DP=133     GT:GQ:DP        0|0:77:25       1|0:100:28      0|1:100:75
+15     43813141        .       A       G       .       PASS    AA=A;DP=129     GT:GQ:DP        0|0:77:25       1|0:100:28      0|1:100:77
+12     129564422       rs4759708       T       G       .       PASS    AA=G;DP=135     GT:GQ:DP        0|0:77:25       1|0:100:28      0|1:100:81
+7      90262341        rs10237334      C       G       .       PASS    AA=C;DP=114     GT:GQ:DP        0|0:77:25       1|0:100:29      0|1:100:58
+6      143074093       .       A       G       .       PASS    AA=A;DP=115     GT:GQ:DP        0|0:77:25       1|0:100:29      0|1:100:61
+2      133823067       .       A       C       .       PASS    AA=A;DP=120     GT:GQ:DP        0|0:77:25       1|0:100:29      0|1:100:66
+8      98658177        rs7014924       G       A       .       PASS    AA=G;DP=129     GT:GQ:DP        0|0:77:25       1|0:100:29      0|1:100:71
+5      85235951        rs6888053       T       C       .       PASS    AA=T;DP=138     GT:GQ:DP        0|0:77:25       1|0:100:29      0|1:100:85
+2      56422381        rs13418483      G       A       .       PASS    AA=G;DP=99      GT:GQ:DP        0|0:77:25       1|0:100:30      0|1:100:31
+2      75483423        .       C       T       .       PASS    AA=C;DP=130     GT:GQ:DP        0|0:77:25       1|0:100:30      0|1:100:74
+13     36872223        .       A       G       .       PASS    AA=A;DP=131     GT:GQ:DP        0|0:77:25       1|0:100:30      0|1:100:78
+16     13167169        .       C       T       .       PASS    AA=C;DP=121     GT:GQ:DP        0|0:77:25       1|0:100:31      0|1:100:65
+18     35945135        rs8088907       G       C       .       PASS    AA=G;DP=123     GT:GQ:DP        0|0:77:25       1|0:100:31      0|1:100:68
+17     22533993        rs56009951      C       T       .       PASS    AA=-;DP=130     GT:GQ:DP        0|0:77:25       1|0:100:32      0|1:100:73
+6      36666942        rs9394363       T       C       .       PASS    AA=C;DP=138     GT:GQ:DP        0|0:77:25       1|0:100:33      0|1:100:39
+4      155639062       rs13148990      C       A       .       PASS    AA=C;DP=117     GT:GQ:DP        0|0:77:25       1|0:100:33      0|1:100:59
+13     87661550        rs4491367       A       G       .       PASS    AA=G;DP=135     GT:GQ:DP        0|0:77:25       1|0:100:33      0|1:100:79
+9      80795558        .       A       C       .       PASS    AA=C;DP=111     GT:GQ:DP        0|0:77:25       1|0:100:34      0|1:100:52
+7      141944540       rs2855952       G       C       .       PASS    AA=G;DP=128     GT:GQ:DP        0|0:77:25       1|0:100:34      0|1:100:71
+18     23342027        .       A       C       .       PASS    AA=A;DP=130     GT:GQ:DP        0|0:77:25       1|0:100:36      0|1:100:69
+13     31731627        .       G       A       .       PASS    AA=G;DP=132     GT:GQ:DP        0|0:77:25       1|0:100:36      0|1:100:72
+2      45560623        .       G       T       .       PASS    AA=G;DP=137     GT:GQ:DP        0|0:77:25       1|0:100:36      0|1:100:76
+8      68517553        rs55897474      T       C       .       PASS    AA=T;DP=118     GT:GQ:DP        0|0:77:25       1|0:100:39      0|1:100:53
+8      56339865        rs60177313      A       G       .       PASS    AA=A;DP=133     GT:GQ:DP        0|0:77:25       1|0:100:42      0|1:100:64
+6      162342157       rs4131681       T       G       .       PASS    AA=T;DP=123     GT:GQ:DP        0|0:77:25       1|0:11:33       0|1:100:65
+11     43189031        .       C       T       .       PASS    AA=t;DP=102     GT:GQ:DP        0|0:77:25       1|0:16:11       0|1:100:67
+3      129343184       rs34372443      A       G       .       PASS    AA=a;DP=94      GT:GQ:DP        0|0:77:25       1|0:17:14       0|1:100:55
+12     17857886        rs11043672      G       A       .       PASS    AA=-;DP=122     GT:GQ:DP        0|0:77:25       1|0:25:21       0|1:100:74
+16     30438653        .       C       T       .       PASS    AA=C;DP=95      GT:GQ:DP        0|0:77:25       1|0:36:13       0|1:100:58
+14     31484314        .       G       A       .       PASS    AA=G;DP=93      GT:GQ:DP        0|0:77:25       1|0:42:14       0|1:100:53
+6      80755127        .       C       T       .       PASS    AA=C;DP=90      GT:GQ:DP        0|0:77:25       1|0:43:17       0|1:100:37
+6      44042024        .       T       C       .       PASS    AA=T;DP=82      GT:GQ:DP        0|0:77:25       1|0:47:15       0|1:100:33
+2      5439047 .       G       C       .       PASS    AA=G;DP=90      GT:GQ:DP        0|0:77:25       1|0:50:10       0|1:100:44
+19     5043450 rs11672790      G       T       .       PASS    AA=G;DP=124     GT:GQ:DP        0|0:77:25       1|0:50:14       0|1:100:84
+3      108566726       rs811098        G       A       .       PASS    AA=A;DP=82      GT:GQ:DP        0|0:77:25       1|0:52:10       0|1:100:49
+10     88486371        rs12252834      C       T       .       PASS    AA=c;DP=118     GT:GQ:DP        0|0:77:25       1|0:52:20       0|1:100:74
+18     27011910        rs58114841      C       A       .       PASS    AA=.;DP=91      GT:GQ:DP        0|0:77:25       1|0:55:16       0|1:100:50
+1      56831530        .       A       G       .       PASS    AA=A;DP=103     GT:GQ:DP        0|0:77:25       1|0:55:16       0|1:100:62
+1      184920388       rs2143416       A       C       .       PASS    AA=C;DP=127;HM2;HM3     GT:GQ:DP        0|0:77:25       1|0:56:20       0|1:100:42
+12     18975313        .       G       A       .       PASS    AA=G;DP=106     GT:GQ:DP        0|0:77:25       1|0:58:17       0|1:100:64
+16     19150403        rs2269786       A       C       .       PASS    AA=A;DP=88      GT:GQ:DP        0|0:77:25       1|0:59:15       0|1:100:48
+16     46774692        .       C       T       .       PASS    AA=C;DP=76      GT:GQ:DP        0|0:77:25       1|0:60:14       0|1:100:32
+5      31381617        .       A       C       .       PASS    AA=A;DP=82      GT:GQ:DP        0|0:77:25       1|0:61:16       0|1:100:30
+13     32649571        rs60421501      A       C       .       PASS    AA=A;DP=114     GT:GQ:DP        0|0:77:25       1|0:63:28       0|1:100:63
+8      43418386        .       A       C       .       PASS    AA=N;DP=107     GT:GQ:DP        0|0:77:25       1|0:64:18       0|1:100:64
+2      105378845       rs6760265       C       T       .       PASS    AA=c;DP=115     GT:GQ:DP        0|0:77:25       1|0:64:18       0|1:100:72
+12     16624703        .       T       C       .       PASS    AA=T;DP=120     GT:GQ:DP        0|0:77:25       1|0:66:17       0|1:100:75
+3      151335906       rs1471867       G       A       .       PASS    AA=g;DP=121     GT:GQ:DP        0|0:77:25       1|0:68:26       0|1:100:71
+3      71476905        rs36047018      C       T       .       PASS    AA=C;DP=87      GT:GQ:DP        0|0:77:25       1|0:74:14       0|1:100:48
+2      70843989        .       G       A       .       PASS    AA=G;DP=82      GT:GQ:DP        0|0:77:25       1|0:76:14       0|1:100:31
+16     26919720        rs11642803      C       T       .       PASS    AA=C;DP=87      GT:GQ:DP        0|0:77:25       1|0:77:17       0|1:100:33
+7      101126835       rs11978556      C       T       .       PASS    AA=C;DP=138     GT:GQ:DP        0|0:77:25       1|0:78:12       0|1:100:61
+6      40562323        .       G       A       .       PASS    AA=G;DP=118     GT:GQ:DP        0|0:77:25       1|0:78:16       0|1:100:75
+22     16153633        rs998491        G       C       .       PASS    AA=g;DP=115     GT:GQ:DP        0|0:77:25       1|0:79:18       0|1:100:75
+2      112676139       rs17041977      T       C       .       PASS    AA=T;DP=104     GT:GQ:DP        0|0:77:25       1|0:79:28       0|1:100:52
+4      23620706        rs7672552       C       T       .       PASS    AA=C;DP=114     GT:GQ:DP        0|0:77:25       1|0:80:11       0|1:100:80
+8      56155764        rs58632359      T       C       .       PASS    AA=T;DP=110     GT:GQ:DP        0|0:77:25       1|0:80:22       0|1:100:51
+11     3118759 rs10833333      T       C       .       PASS    AA=t;DP=100     GT:GQ:DP        0|0:77:25       1|0:81:13       0|1:100:63
+8      27150328        .       G       A       .       PASS    AA=G;DP=114     GT:GQ:DP        0|0:77:25       1|0:81:13       0|1:100:72
+8      16727792        rs584918        T       C       .       PASS    AA=T;DP=89      GT:GQ:DP        0|0:77:25       1|0:82:15       0|1:100:49
+10     21014835        .       A       G       .       PASS    AA=A;DP=116     GT:GQ:DP        0|0:77:25       1|0:82:19       0|1:100:31
+19     21652043        rs1983379       C       T       .       PASS    AA=-;DP=102     GT:GQ:DP        0|0:77:25       1|0:82:21       0|1:100:57
+9      36986267        .       C       A       .       PASS    AA=C;DP=120     GT:GQ:DP        0|0:77:25       1|0:82:21       0|1:100:72
+10     18859828        rs56386348      C       T       .       PASS    AA=C;DP=91      GT:GQ:DP        0|0:77:25       1|0:87:15       0|1:100:37
+9      19231542        .       T       C       .       PASS    AA=T;DP=99      GT:GQ:DP        0|0:77:25       1|0:87:15       0|1:100:62
+8      31611717        rs34914596      C       T       .       PASS    AA=C;DP=114     GT:GQ:DP        0|0:77:25       1|0:88:19       0|1:100:30
+11     43044535        .       T       C       .       PASS    AA=T;DP=86      GT:GQ:DP        0|0:77:25       1|0:89:14       0|1:100:48
+8      75692446        rs7003280       C       T       .       PASS    AA=C;DP=93      GT:GQ:DP        0|0:77:25       1|0:89:18       0|1:100:49
+19     6156825 rs10425093      G       A       .       PASS    AA=G;DP=144     GT:GQ:DP        0|0:77:25       1|0:91:21       0|1:100:48
+8      88176391        rs11985830      A       C       .       PASS    AA=A;DP=91      GT:GQ:DP        0|0:77:25       1|0:92:14       0|1:100:51
+2      115196328       rs12711803      G       A       .       PASS    AA=A;DP=95      GT:GQ:DP        0|0:77:25       1|0:92:14       0|1:100:52
+8      127323457       rs11997767      C       T       .       PASS    AA=C;DP=112     GT:GQ:DP        0|0:77:25       1|0:92:24       0|1:100:65
+3      113103878       rs1282940       C       T       .       PASS    AA=C;DP=96      GT:GQ:DP        0|0:77:25       1|0:93:20       0|1:100:51
+19     32859726        rs758763        T       C       .       PASS    AA=.;DP=115     GT:GQ:DP        0|0:77:25       1|0:93:21       0|1:100:71
+1      98234769        .       C       T       .       PASS    AA=c;DP=86      GT:GQ:DP        0|0:77:25       1|0:94:15       0|1:100:46
+3      53039523        rs6798669       G       A       .       PASS    AA=g;DP=97      GT:GQ:DP        0|0:77:25       1|0:94:18       0|1:100:53
+10     60713057        rs12257689      G       A       .       PASS    AA=G;DP=134     GT:GQ:DP        0|0:77:25       1|0:94:19       0|1:100:89
+11     87275433        rs599758        G       C       .       PASS    AA=G;DP=139     GT:GQ:DP        0|0:77:25       1|0:94:27       0|1:100:88
+13     81487740        rs9545951       T       C       .       PASS    AA=T;DP=96      GT:GQ:DP        0|0:77:25       1|0:95:14       0|1:100:57
+2      195887925       rs16824327      A       C       .       PASS    AA=C;DP=97      GT:GQ:DP        0|0:77:25       1|0:95:15       0|1:100:58
+9      81013326        .       A       G       .       PASS    AA=A;DP=114     GT:GQ:DP        0|0:77:25       1|0:95:21       0|1:100:69
+11     23487551        rs10767077      A       G       .       PASS    AA=A;DP=123     GT:GQ:DP        0|0:77:25       1|0:96:22       0|1:100:78
+5      7324838 rs7723175       T       G       .       PASS    AA=t;DP=124     GT:GQ:DP        0|0:77:25       1|0:97:27       0|1:100:73
+9      139367580       .       C       T       .       PASS    AA=C;DP=92      GT:GQ:DP        0|0:77:25       1|0:99:14       0|1:100:45
+4      122009993       .       G       A       .       PASS    AA=G;DP=96      GT:GQ:DP        0|0:77:25       1|0:99:19       0|1:100:51
+18     66979958        rs57603803      G       A       .       PASS    AA=G;DP=119     GT:GQ:DP        0|0:77:25       1|0:99:20       0|1:100:64
+17     73602684        rs57574050      G       A       .       PASS    AA=G;DP=103     GT:GQ:DP        0|0:77:25       1|0:9:16        0|1:100:63
+4      101446055       rs4235451       G       A       .       PASS    AA=G;DP=101     GT:GQ:DP        0|0:77:26       0|1:100:12      0|0:100:64
+1      152250057       .       T       C       .       PASS    AA=T;DP=86      GT:GQ:DP        0|0:77:26       0|1:100:19      0|0:100:42
+14     93934325        .       C       G       .       PASS    AA=C;DP=119     GT:GQ:DP        0|0:77:26       0|1:100:21      0|0:100:75
+13     79559572        rs61229346      G       A       .       PASS    AA=G;DP=121     GT:GQ:DP        0|0:77:26       0|1:100:21      0|0:99:33
+8      50198206        rs6997295       A       T       .       PASS    AA=.;DP=107     GT:GQ:DP        0|0:77:26       0|1:100:24      0|0:100:57
+1      42519682        .       G       C       .       PASS    AA=G;DP=93      GT:GQ:DP        0|0:77:26       0|1:100:24      0|0:99:34
+17     55047338        rs9894734       G       A       .       PASS    AA=G;DP=119     GT:GQ:DP        0|0:77:26       0|1:100:27      0|0:100:62
+4      44365316        .       T       C       .       PASS    AA=C;DP=118     GT:GQ:DP        0|0:77:26       0|1:100:27      0|0:100:66
+11     126969748       .       G       A       .       PASS    AA=g;DP=136     GT:GQ:DP        0|0:77:26       0|1:100:27      0|0:100:82
+4      36715861        rs1957730       T       C       .       PASS    AA=T;DP=127     GT:GQ:DP        0|0:77:26       0|1:100:30      0|0:87:29
+10     57142965        rs10825585      A       G       .       PASS    AA=G;DP=136     GT:GQ:DP        0|0:77:26       0|1:100:32      0|0:100:78
+17     69073483        rs60630466      C       T       .       PASS    AA=c;DP=97      GT:GQ:DP        0|0:77:26       1|0:100:12      0|1:100:58
+8      143851942       rs60603045      G       T       .       PASS    AA=g;DP=103     GT:GQ:DP        0|0:77:26       1|0:100:13      0|1:100:64
+14     25638814        .       C       T       .       PASS    AA=C;DP=79      GT:GQ:DP        0|0:77:26       1|0:100:14      0|1:100:38
+6      154979065       rs10782335      C       T       .       PASS    AA=T;DP=109     GT:GQ:DP        0|0:77:26       1|0:100:14      0|1:100:69
+1      112985757       rs12086087      G       A       .       PASS    AA=G;DP=96      GT:GQ:DP        0|0:77:26       1|0:100:15      0|1:100:43
+1      24802415        rs57011922      A       G       .       PASS    AA=A;DP=90      GT:GQ:DP        0|0:77:26       1|0:100:15      0|1:100:45
+1      21769505        rs2275376       G       A       .       PASS    AA=g;DP=97      GT:GQ:DP        0|0:77:26       1|0:100:16      0|1:100:44
+5      124289950       rs2408225       T       C       .       PASS    AA=T;DP=103     GT:GQ:DP        0|0:77:26       1|0:100:16      0|1:100:64
+3      58664114        .       A       T       .       PASS    AA=a;DP=100     GT:GQ:DP        0|0:77:26       1|0:100:18      0|1:100:58
+8      13241022        .       C       T       .       PASS    AA=C;DP=89      GT:GQ:DP        0|0:77:26       1|0:100:19      0|1:100:43
+6      94717207        .       G       T       .       PASS    AA=G;DP=104     GT:GQ:DP        0|0:77:26       1|0:100:19      0|1:100:57
+2      215354928       rs16852750      A       G       .       PASS    AA=A;DP=113     GT:GQ:DP        0|0:77:26       1|0:100:19      0|1:100:67
+19     33439063        .       T       C       .       PASS    AA=T;DP=106     GT:GQ:DP        0|0:77:26       1|0:100:20      0|1:100:59
+6      83437391        .       A       G       .       PASS    AA=A;DP=117     GT:GQ:DP        0|0:77:26       1|0:100:20      0|1:100:71
+2      85945764        rs1533605       T       C       .       PASS    AA=T;DP=143     GT:GQ:DP        0|0:77:26       1|0:100:20      0|1:100:95
+12     11499301        rs7301342       A       T       .       PASS    AA=a;DP=99      GT:GQ:DP        0|0:77:26       1|0:100:21      0|1:100:42
+3      55764185        rs34029701      G       C       .       PASS    AA=G;DP=138     GT:GQ:DP        0|0:77:26       1|0:100:21      0|1:100:45
+2      230366888       .       T       C       .       PASS    AA=T;DP=109     GT:GQ:DP        0|0:77:26       1|0:100:21      0|1:100:61
+5      168834969       rs13177525      T       G       .       PASS    AA=G;DP=110     GT:GQ:DP        0|0:77:26       1|0:100:21      0|1:100:67
+3      125520166       .       T       C       .       PASS    AA=T;DP=118     GT:GQ:DP        0|0:77:26       1|0:100:21      0|1:100:72
+4      157209504       rs6536138       A       G       .       PASS    AA=G;DP=125     GT:GQ:DP        0|0:77:26       1|0:100:21      0|1:100:80
+13     106833338       rs9670702       G       C       .       PASS    AA=C;DP=112     GT:GQ:DP        0|0:77:26       1|0:100:22      0|1:100:59
+16     49430466        rs16948913      T       C       .       PASS    AA=T;DP=109     GT:GQ:DP        0|0:77:26       1|0:100:23      0|1:100:61
+3      68813679        .       A       G       .       PASS    AA=A;DP=116     GT:GQ:DP        0|0:77:26       1|0:100:23      0|1:100:65
+1      196767272       .       G       A       .       PASS    AA=G;DP=117     GT:GQ:DP        0|0:77:26       1|0:100:23      0|1:100:67
+13     49162719        .       A       C       .       PASS    AA=A;DP=114     GT:GQ:DP        0|0:77:26       1|0:100:23      0|1:100:69
+12     126322315       rs7297329       C       T       .       PASS    AA=C;DP=125     GT:GQ:DP        0|0:77:26       1|0:100:23      0|1:100:74
+7      44850181        rs13246137      A       C       .       PASS    AA=C;DP=96      GT:GQ:DP        0|0:77:26       1|0:100:25      0|1:100:46
+2      211742129       rs6754172       A       G       .       PASS    AA=A;DP=110     GT:GQ:DP        0|0:77:26       1|0:100:25      0|1:100:59
+7      19069650        .       C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        0|0:77:26       1|0:100:25      0|1:100:60
+4      119535814       rs11934393      T       G       .       PASS    AA=T;DP=127     GT:GQ:DP        0|0:77:26       1|0:100:25      0|1:100:77
+1      74225796        .       T       C       .       PASS    AA=T;DP=122     GT:GQ:DP        0|0:77:26       1|0:100:26      0|1:100:66
+6      165230518       .       T       A       .       PASS    AA=-;DP=122     GT:GQ:DP        0|0:77:26       1|0:100:26      0|1:100:72
+19     34034104        rs10401543      T       A       .       PASS    AA=T;DP=134     GT:GQ:DP        0|0:77:26       1|0:100:26      0|1:100:82
+20     14192971        rs1998238       A       G       .       PASS    AA=a;DP=130     GT:GQ:DP        0|0:77:26       1|0:100:27      0|1:100:78
+12     59981059        rs7304872       C       T       .       PASS    AA=C;DP=94      GT:GQ:DP        0|0:77:26       1|0:100:28      0|1:100:39
+6      94884736        rs9363148       C       T       .       PASS    AA=T;DP=98      GT:GQ:DP        0|0:77:26       1|0:100:28      0|1:100:47
+11     61704282        rs12789264      A       G       .       PASS    AA=A;DP=115     GT:GQ:DP        0|0:77:26       1|0:100:29      0|1:100:62
+8      101246624       .       A       G       .       PASS    AA=A;DP=146     GT:GQ:DP        0|0:77:26       1|0:100:32      0|1:100:43
+16     77040781        .       A       G       .       PASS    AA=A;DP=132     GT:GQ:DP        0|0:77:26       1|0:100:32      0|1:100:76
+4      183014776       rs7655087       G       T       .       PASS    AA=G;DP=159     GT:GQ:DP        0|0:77:26       1|0:100:36      0|1:100:55
+5      98011043        rs10065249      C       G       .       PASS    AA=C;DP=107     GT:GQ:DP        0|0:77:26       1|0:11:17       0|1:100:63
+2      114568693       rs58238386      T       C       .       PASS    AA=T;DP=88      GT:GQ:DP        0|0:77:26       1|0:43:18       0|1:100:44
+10     131312511       rs61978620      C       A       .       PASS    AA=C;DP=95      GT:GQ:DP        0|0:77:26       1|0:49:11       0|1:100:58
+1      247080677       .       G       A       .       PASS    AA=G;DP=112     GT:GQ:DP        0|0:77:26       1|0:55:25       0|1:100:62
+7      51746507        .       G       C       .       PASS    AA=G;DP=100     GT:GQ:DP        0|0:77:26       1|0:59:19       0|1:100:55
+2      2858485 rs1667003       T       C       .       PASS    AA=T;DP=116     GT:GQ:DP        0|0:77:26       1|0:65:15       0|1:100:72
+11     32032887        rs10835834      C       T       .       PASS    AA=T;DP=96      GT:GQ:DP        0|0:77:26       1|0:66:14       0|1:100:55
+16     14288269        rs246177        C       T       .       PASS    AA=C;DP=98      GT:GQ:DP        0|0:77:26       1|0:68:18       0|1:100:49
+10     87888819        rs34013482      G       A       .       PASS    AA=g;DP=139     GT:GQ:DP        0|0:77:26       1|0:72:18       0|1:100:57
+10     112688572       rs11195382      A       G       .       PASS    AA=A;DP=105     GT:GQ:DP        0|0:77:26       1|0:72:26       0|1:100:56
+1      46865229        .       A       G       .       PASS    AA=A;DP=97      GT:GQ:DP        0|0:77:26       1|0:73:13       0|1:100:61
+7      95786084        rs11975883      C       G       .       PASS    AA=C;DP=135     GT:GQ:DP        0|0:77:26       1|0:76:25       0|1:100:84
+20     1487713 rs60385016      A       G       .       PASS    AA=N;DP=107     GT:GQ:DP        0|0:77:26       1|0:77:19       0|1:100:64
+9      11265227        rs1489177       C       T       .       PASS    AA=T;DP=129     GT:GQ:DP        0|0:77:26       1|0:78:24       0|1:100:78
+2      79564180        rs60619539      C       G       .       PASS    AA=C;DP=96      GT:GQ:DP        0|0:77:26       1|0:79:21       0|1:100:48
+7      21132870        rs7782230       C       T       .       PASS    AA=C;DP=91      GT:GQ:DP        0|0:77:26       1|0:80:20       0|1:100:44
+1      3452893 rs61548507      G       C       .       PASS    AA=G;DP=93      GT:GQ:DP        0|0:77:26       1|0:82:10       0|1:100:59
+2      2190672 rs7587635       T       C       .       PASS    AA=t;DP=104     GT:GQ:DP        0|0:77:26       1|0:82:15       0|1:100:51
+8      47208502        rs4415328       C       T       .       PASS    AA=.;DP=119     GT:GQ:DP        0|0:77:26       1|0:84:20       0|1:100:74
+11     2570282 .       C       T       .       PASS    AA=C;DP=83      GT:GQ:DP        0|0:77:26       1|0:85:10       0|1:100:42
+2      45168529        .       T       A       .       PASS    AA=T;DP=117     GT:GQ:DP        0|0:77:26       1|0:85:18       0|1:100:77
+14     30297587        rs179547        C       T       .       PASS    AA=C;DP=131     GT:GQ:DP        0|0:77:26       1|0:85:21       0|1:100:43
+6      93611072        rs2037157       G       A       .       PASS    AA=G;DP=120     GT:GQ:DP        0|0:77:26       1|0:86:16       0|1:100:61
+14     27396077        rs61972793      A       T       .       PASS    AA=A;DP=109     GT:GQ:DP        0|0:77:26       1|0:91:19       0|1:100:62
+1      38444284        rs11208746      G       A       .       PASS    AA=G;DP=84      GT:GQ:DP        0|0:77:26       1|0:92:12       0|1:100:46
+6      32736066        .       C       G       .       PASS    AA=c;DP=108     GT:GQ:DP        0|0:77:26       1|0:92:18       0|1:100:55
+7      24944882        .       A       G       .       PASS    AA=A;DP=110     GT:GQ:DP        0|0:77:26       1|0:92:23       0|1:100:61
+12     42778033        rs17094072      T       A       .       PASS    AA=T;DP=104     GT:GQ:DP        0|0:77:26       1|0:96:18       0|1:100:61
+3      14774509        rs35399358      G       C       .       PASS    AA=g;DP=134     GT:GQ:DP        0|0:77:27       0|1:100:22      0|0:100:86
+4      23205903        .       C       T       .       PASS    AA=C;DP=87      GT:GQ:DP        0|0:77:27       1|0:100:15      0|1:100:37
+7      53962098        rs12718820      G       C       .       PASS    AA=G;DP=110     GT:GQ:DP        0|0:77:27       1|0:100:18      0|1:100:67
+11     131448027       rs1793631       G       A       .       PASS    AA=G;DP=116     GT:GQ:DP        0|0:77:27       1|0:100:19      0|1:100:70
+5      108091509       rs60645247      T       C       .       PASS    AA=T;DP=117     GT:GQ:DP        0|0:77:27       1|0:100:20      0|1:100:71
+5      116429017       rs6869550       A       G       .       PASS    AA=A;DP=117     GT:GQ:DP        0|0:77:27       1|0:100:21      0|1:100:68
+2      223165437       rs16863916      C       T       .       PASS    AA=T;DP=90      GT:GQ:DP        0|0:77:27       1|0:100:22      0|1:100:32
+9      18319404        .       G       A       .       PASS    AA=g;DP=151     GT:GQ:DP        0|0:77:27       1|0:100:25      0|1:100:41
+10     126878610       .       A       T       .       PASS    AA=A;DP=116     GT:GQ:DP        0|0:77:27       1|0:100:25      0|1:100:66
+13     93550183        .       A       T       .       PASS    AA=T;DP=109     GT:GQ:DP        0|0:77:27       1|0:100:26      0|1:100:56
+3      155819729       .       T       C       .       PASS    AA=C;DP=141     GT:GQ:DP        0|0:77:27       1|0:100:27      0|1:100:90
+21     24943907        rs34164972      G       T       .       PASS    AA=G;DP=130     GT:GQ:DP        0|0:77:27       1|0:100:28      0|1:100:62
+19     49107021        rs57539886      T       A       .       PASS    AA=T;DP=111     GT:GQ:DP        0|0:77:27       1|0:100:30      0|1:100:55
+4      39839366        rs6531759       A       G       .       PASS    AA=A;DP=123     GT:GQ:DP        0|0:77:27       1|0:100:30      0|1:100:68
+7      146456994       rs3807570       A       G       .       PASS    AA=A;DP=138     GT:GQ:DP        0|0:77:27       1|0:100:37      0|1:100:73
+6      3893278 rs4959904       G       C       .       PASS    AA=g;DP=84      GT:GQ:DP        0|0:77:27       1|0:64:16       0|1:100:31
+7      139723517       rs12673021      G       C       .       PASS    AA=G;DP=88      GT:GQ:DP        0|0:77:27       1|0:73:11       0|1:100:50
+3      176623028       rs9872034       G       A       .       PASS    AA=G;DP=96      GT:GQ:DP        0|0:77:27       1|0:75:21       0|1:100:35
+1      63980014        rs2819179       G       A       .       PASS    AA=A;DP=131     GT:GQ:DP        0|0:77:27       1|0:82:21       0|1:100:84
+15     35924105        .       C       T       .       PASS    AA=C;DP=105     GT:GQ:DP        0|0:77:27       1|0:93:25       0|1:100:53
+20     7577157 rs61067184      G       T       .       PASS    AA=G;DP=105     GT:GQ:DP        0|0:77:28       0|1:100:20      0|0:100:59
+18     9719789 rs7242973       A       G       .       PASS    AA=A;DP=87      GT:GQ:DP        0|0:77:28       1|0:100:13      0|1:100:47
+5      38679011        .       T       C       .       PASS    AA=T;DP=136     GT:GQ:DP        0|0:77:28       1|0:100:22      0|1:100:88
+1      38887963        .       C       T       .       PASS    AA=C;DP=125     GT:GQ:DP        0|0:77:28       1|0:100:29      0|1:100:68
+8      60117049        .       G       A       .       PASS    AA=g;DP=114     GT:GQ:DP        0|0:77:28       1|0:33:18       0|1:100:68
+15     31359011        rs4779615       T       C       .       PASS    AA=T;DP=135     GT:GQ:DP        0|0:77:28       1|0:78:20       0|1:100:91
+5      6451132 .       A       G       .       PASS    AA=A;DP=139     GT:GQ:DP        0|0:77:29       1|0:100:28      0|1:100:84
+10     101036165       .       G       A       .       PASS    AA=G;DP=93      GT:GQ:DP        0|0:77:29       1|0:60:11       0|1:100:55
+2      124611049       rs34125234      G       T       .       PASS    AA=G;DP=114     GT:GQ:DP        0|0:77:29       1|0:70:22       0|1:100:63
+16     817957  rs12443922      C       T       .       PASS    AA=C;DP=129     GT:GQ:DP        0|0:77:30       0|1:100:17      0|0:100:86
+16     63636450        .       C       T       .       PASS    AA=C;DP=105     GT:GQ:DP        0|0:77:30       0|1:100:19      0|0:100:56
+16     53125822        .       A       G       .       PASS    AA=A;DP=124     GT:GQ:DP        0|0:77:30       0|1:100:19      0|0:100:78
+18     7323191 .       T       C       .       PASS    AA=T;DP=162     GT:GQ:DP        0|0:77:31       0|1:100:20      0|0:100:57
+2      57678987        .       A       C       .       PASS    AA=A;DP=130     GT:GQ:DP        0|0:77:31       0|1:100:23      0|0:100:78
+6      125794462       .       C       T       .       PASS    AA=c;DP=129     GT:GQ:DP        0|0:77:31       0|1:100:25      0|0:100:57
+12     120542084       rs7316908       C       G       .       PASS    AA=C;DP=125     GT:GQ:DP        0|0:77:31       1|0:100:22      0|1:100:74
+6      3448194 .       T       A       .       PASS    AA=T;DP=141     GT:GQ:DP        0|0:77:31       1|0:100:25      0|1:100:85
+2      172136687       rs2356788       A       T       .       PASS    AA=A;DP=125     GT:GQ:DP        0|0:77:32       1|0:95:18       0|1:100:72
+3      82187186        rs9875359       A       T       .       PASS    AA=A;DP=110     GT:GQ:DP        0|0:77:32       1|1:52:19       0|1:100:61
+9      139766468       rs10867058      C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        0|0:77:33       0|1:100:19      0|0:100:55
+6      15004605        rs863909        T       C       .       PASS    AA=T;DP=115     GT:GQ:DP        0|0:77:33       0|1:100:19      0|0:100:66
+10     59539640        .       G       A       .       PASS    AA=G;DP=123     GT:GQ:DP        0|0:77:33       1|0:100:27      0|1:100:62
+22     36976774        .       A       G       .       PASS    AA=G;DP=110     GT:GQ:DP        0|0:77:33       1|1:40:16       0|1:100:61
+3      178612060       .       C       T       .       PASS    AA=C;DP=98      GT:GQ:DP        0|0:78:25       0|1:100:21      0|0:100:52
+3      128342289       rs9853091       C       T       .       PASS    AA=c;DP=94      GT:GQ:DP        0|0:78:26       1|1:13:6        0|1:100:63
+6      87238845        rs4707285       A       C       .       PASS    AA=-;DP=110     GT:GQ:DP        0|0:78:26       1|1:14:18       0|1:100:64
+2      153438070       rs10209901      C       T       .       PASS    AA=C;DP=81      GT:GQ:DP        0|0:78:26       1|1:16:7        0|1:100:51
+18     20100618        rs275881        C       A       .       PASS    AA=A;DP=100     GT:GQ:DP        0|0:78:26       1|1:20:23       0|1:100:51
+2      188443015       rs1516129       C       T       .       PASS    AA=c;DP=106     GT:GQ:DP        0|0:78:26       1|1:24:17       0|1:100:63
+1      159110247       rs6699166       G       A       .       PASS    AA=G;DP=92      GT:GQ:DP        0|0:78:26       1|1:28:12       0|1:100:54
+4      88279856        rs1842685       T       C       .       PASS    AA=T;DP=113     GT:GQ:DP        0|0:78:26       1|1:28:13       0|1:100:72
+6      159267812       rs9347276       T       A       .       PASS    AA=.;DP=98      GT:GQ:DP        0|0:78:26       1|1:28:22       0|1:100:40
+3      104639145       rs12636224      T       G       .       PASS    AA=G;DP=110     GT:GQ:DP        0|0:78:26       1|1:29:19       0|1:100:64
+5      30470751        .       C       T       .       PASS    AA=C;DP=94      GT:GQ:DP        0|0:78:26       1|1:31:12       0|1:100:59
+4      123104074       .       A       G       .       PASS    AA=A;DP=90      GT:GQ:DP        0|0:78:26       1|1:32:18       0|1:100:48
+3      17425275        rs10865749      A       T       .       PASS    AA=A;DP=88      GT:GQ:DP        0|0:78:26       1|1:37:14       0|1:100:46
+15     94257104        .       C       T       .       PASS    AA=C;DP=94      GT:GQ:DP        0|0:78:26       1|1:37:14       0|1:100:57
+3      129554680       rs59849952      A       G       .       PASS    AA=G;DP=99      GT:GQ:DP        0|0:78:26       1|1:39:20       0|1:100:53
+10     113186800       rs4636584       A       G       .       PASS    AA=A;DP=106     GT:GQ:DP        0|0:78:26       1|1:40:16       0|1:100:65
+4      7620394 rs7677330       G       C       .       PASS    AA=g;DP=102     GT:GQ:DP        0|0:78:26       1|1:40:22       0|1:100:54
+3      65119603        rs13070141      C       T       .       PASS    AA=T;DP=101     GT:GQ:DP        0|0:78:26       1|1:42:19       0|1:100:57
+13     72155562        rs3910506       A       G       .       PASS    AA=A;DP=124     GT:GQ:DP        0|0:78:26       1|1:43:16       0|1:100:82
+4      120291686       rs6828349       A       G       .       PASS    AA=G;DP=101     GT:GQ:DP        0|0:78:26       1|1:45:25       0|1:100:40
+7      130261523       rs157893        G       C       .       PASS    AA=g;DP=99      GT:GQ:DP        0|0:78:26       1|1:46:17       0|1:100:56
+11     30068165        rs1436101       A       G       .       PASS    AA=G;DP=121     GT:GQ:DP        0|0:78:26       1|1:49:20       0|1:100:74
+3      33743048        rs12638249      G       A       .       PASS    AA=G;DP=121     GT:GQ:DP        0|0:78:26       1|1:49:25       0|1:100:71
+7      15645020        rs55774621      C       T       .       PASS    AA=C;DP=96      GT:GQ:DP        0|0:78:26       1|1:52:19       0|1:100:52
+6      21055236        rs12203876      A       G       .       PASS    AA=A;DP=116     GT:GQ:DP        0|0:78:26       1|1:52:20       0|1:100:67
+14     100163930       rs1190891       C       T       .       PASS    AA=c;DP=117     GT:GQ:DP        0|0:78:26       1|1:52:21       0|1:100:69
+11     113599593       rs403104        G       A       .       PASS    AA=A;DP=113     GT:GQ:DP        0|0:78:26       1|1:55:20       0|1:100:67
+8      64449228        rs7825687       T       C       .       PASS    AA=T;DP=111     GT:GQ:DP        0|0:78:26       1|1:55:22       0|1:100:59
+6      29619921        rs11966844      T       C       .       PASS    AA=T;DP=109     GT:GQ:DP        0|0:78:26       1|1:55:23       0|1:100:58
+1      243974297       rs2791358       C       T       .       PASS    AA=T;DP=92;HM2  GT:GQ:DP        0|0:78:26       1|1:58:21       0|1:100:33
+19     59629156        rs10418638      C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        0|0:78:26       1|1:58:23       0|1:100:72
+3      6379998 rs4686050       A       G       .       PASS    AA=G;DP=111     GT:GQ:DP        0|0:78:26       1|1:59:24       0|1:100:62
+6      123077636       rs4946629       C       T       .       PASS    AA=c;DP=113     GT:GQ:DP        0|0:78:26       1|1:5:13        0|1:100:70
+4      95957249        rs7692640       C       A       .       PASS    AA=C;DP=122     GT:GQ:DP        0|0:78:26       1|1:61:22       0|1:100:76
+10     117810190       rs180550        G       C       .       PASS    AA=C;DP=132     GT:GQ:DP        0|0:78:26       1|1:61:22       0|1:100:85
+1      88028326        rs719141        T       C       .       PASS    AA=T;DP=126;HM2 GT:GQ:DP        0|0:78:26       1|1:61:23       0|1:100:35
+1      81545073        rs12131651      C       T       .       PASS    AA=T;DP=93      GT:GQ:DP        0|0:78:26       1|1:64:23       0|1:100:31
+16     7828596 rs4238891       G       C       .       PASS    AA=C;DP=122     GT:GQ:DP        0|0:78:26       1|1:64:23       0|1:100:72
+2      126687820       rs28419021      A       T       .       PASS    AA=T;DP=122     GT:GQ:DP        0|0:78:26       1|1:64:23       0|1:100:74
+2      176454447       rs2121394       T       A       .       PASS    AA=T;DP=122     GT:GQ:DP        0|0:78:26       1|1:66:29       0|1:100:70
+7      61935344        rs4718283       T       A       .       PASS    AA=.;DP=96      GT:GQ:DP        0|0:78:26       1|1:67:24       0|1:100:46
+7      19961433        .       T       C       .       PASS    AA=T;DP=108     GT:GQ:DP        0|0:78:26       1|1:67:25       0|1:100:45
+4      160568563       rs4691563       C       T       .       PASS    AA=C;DP=139     GT:GQ:DP        0|0:78:26       1|1:67:25       0|1:100:86
+4      16339394        rs507459        T       C       .       PASS    AA=C;DP=116     GT:GQ:DP        0|0:78:26       1|1:70:26       0|1:100:61
+7      70157766        rs10269045      C       T       .       PASS    AA=T;DP=119     GT:GQ:DP        0|0:78:26       1|1:76:27       0|1:100:66
+14     30622887        rs10149122      T       C       .       PASS    AA=C;DP=136     GT:GQ:DP        0|0:78:26       1|1:76:28       0|1:100:82
+16     3917802 rs11649426      A       G       .       PASS    AA=A;DP=147     GT:GQ:DP        0|0:78:26       1|1:79:28       0|1:100:92
+22     23899513        .       T       C       .       PASS    AA=T;DP=113     GT:GQ:DP        0|0:78:26       1|1:79:29       0|1:100:60
+2      50371974        rs2351513       T       G       .       PASS    AA=G;DP=141     GT:GQ:DP        0|0:78:26       1|1:79:33       0|1:100:82
+4      10377717        rs60045609      C       T       .       PASS    AA=c;DP=103     GT:GQ:DP        0|0:78:27       1|1:12:21       0|1:100:55
+X      118174  rs56372760      C       G       .       PASS    AA=.;DP=74      GT:GQ:DP        0|0:78:27       1|1:28:11       0|1:100:33
+17     6510116 rs4796538       T       C       .       PASS    AA=T;DP=106     GT:GQ:DP        0|0:78:27       1|1:28:11       0|1:100:68
+20     46216743        rs6094994       T       C       .       PASS    AA=T;DP=109     GT:GQ:DP        0|0:78:27       1|1:31:13       0|1:100:69
+20     11427926        rs2207905       T       C       .       PASS    AA=T;DP=104     GT:GQ:DP        0|0:78:27       1|1:37:14       0|1:100:63
+2      55281294        rs10167895      C       T       .       PASS    AA=C;DP=113     GT:GQ:DP        0|0:78:27       1|1:40:24       0|1:100:61
+7      150645291       rs7810819       A       G       .       PASS    AA=A;DP=121     GT:GQ:DP        0|0:78:27       1|1:41:21       0|1:100:77
+6      15959156        rs220927        A       C       .       PASS    AA=A;DP=116     GT:GQ:DP        0|0:78:27       1|1:43:17       0|1:100:69
+3      39687697        rs1534329       T       C       .       PASS    AA=C;DP=113     GT:GQ:DP        0|0:78:27       1|1:43:17       0|1:100:71
+1      156272028       rs16839654      T       C       .       PASS    AA=T;DP=120;HM2;HM3     GT:GQ:DP        0|0:78:27       1|1:43:17       0|1:100:76
+17     36845659        rs8068881       G       A       .       PASS    AA=G;DP=85      GT:GQ:DP        0|0:78:27       1|1:43:18       0|1:100:26
+5      35248441        rs924599        T       C       .       PASS    AA=C;DP=107     GT:GQ:DP        0|0:78:27       1|1:45:25       0|1:100:57
+2      79253046        rs11888133      G       A       .       PASS    AA=G;DP=123     GT:GQ:DP        0|0:78:27       1|1:52:19       0|1:100:77
+6      64392600        rs56977573      C       T       .       PASS    AA=C;DP=131     GT:GQ:DP        0|0:78:27       1|1:53:26       0|1:100:77
+11     10222076        rs7112413       C       T       .       PASS    AA=C;DP=117     GT:GQ:DP        0|0:78:27       1|1:60:32       0|1:100:54
+14     59264807        .       A       G       .       PASS    AA=A;DP=126     GT:GQ:DP        0|0:78:27       1|1:61:22       0|1:100:78
+4      10954192        rs10488974      G       C       .       PASS    AA=G;DP=146     GT:GQ:DP        0|0:78:27       1|1:79:28       0|1:100:77
+21     32233128        .       G       A       .       PASS    AA=G;DP=149     GT:GQ:DP        0|0:78:27       1|1:88:31       0|1:100:51
+3      124608401       rs9851257       T       A       .       PASS    AA=A;DP=93      GT:GQ:DP        0|0:78:28       1|1:25:10       0|1:100:55
+15     64330474        rs8037432       C       T       .       PASS    AA=C;DP=105     GT:GQ:DP        0|0:78:28       1|1:41:16       0|1:100:54
+19     37823977        rs7260258       T       C       .       PASS    AA=T;DP=107     GT:GQ:DP        0|0:78:28       1|1:46:19       0|1:100:61
+19     53267920        rs3786772       T       C       .       PASS    AA=T;DP=117     GT:GQ:DP        0|0:78:28       1|1:46:19       0|1:100:71
+3      21623387        rs6783237       C       T       .       PASS    AA=C;DP=118     GT:GQ:DP        0|0:78:28       1|1:58:21       0|1:100:68
+21     42236203        .       G       C       .       PASS    AA=G;DP=111     GT:GQ:DP        0|0:78:28       1|1:8:15        0|1:100:69
+16     86341091        rs9940714       A       G       .       PASS    AA=A;DP=130     GT:GQ:DP        0|0:78:29       0|1:100:22      0|0:100:79
+2      105623572       .       G       A       .       PASS    AA=G;DP=130     GT:GQ:DP        0|0:78:29       1|0:100:21      0|1:100:79
+16     2450604 rs4786284       C       T       .       PASS    AA=C;DP=80      GT:GQ:DP        0|0:78:29       1|1:37:15       0|1:100:31
+17     30000613        .       T       C       .       PASS    AA=T;DP=117     GT:GQ:DP        0|0:78:30       0|1:100:13      0|0:100:75
+1      97616336        rs6672867       G       A       .       PASS    AA=G;DP=122     GT:GQ:DP        0|0:78:30       0|1:100:18      0|0:100:77
+4      68558747        .       G       A       .       PASS    AA=G;DP=112     GT:GQ:DP        0|0:78:30       0|1:100:24      0|0:100:54
+6      80127136        .       C       A       .       PASS    AA=C;DP=131     GT:GQ:DP        0|0:78:30       0|1:100:24      0|0:100:77
+2      238072418       rs10177348      C       T       .       PASS    AA=T;DP=126     GT:GQ:DP        0|0:78:30       0|1:100:25      0|0:100:72
+2      103051344       .       A       T       .       PASS    AA=A;DP=114     GT:GQ:DP        0|0:78:30       0|1:100:28      0|0:100:56
+2      156621797       rs35615431      A       G       .       PASS    AA=G;DP=129     GT:GQ:DP        0|0:78:30       1|0:100:21      0|1:100:75
+1      82289499        .       T       C       .       PASS    AA=T;DP=121     GT:GQ:DP        0|0:78:31       1|0:100:31      0|1:100:48
+4      1528299 rs57775215      C       T       .       PASS    AA=C;DP=94      GT:GQ:DP        0|0:78:31       1|0:69:8        0|1:100:50
+4      131331773       rs7692864       G       C       .       PASS    AA=-;DP=79      GT:GQ:DP        0|0:78:31       1|1:6:11        0|1:69:27
+7      16653259        rs6979831       A       T       .       PASS    AA=A;DP=139     GT:GQ:DP        0|0:78:32       0|1:100:30      0|0:100:79
+11     134111604       rs4937942       A       C       .       PASS    AA=C;DP=114     GT:GQ:DP        0|0:78:32       1|0:14:12       0|1:100:70
+11     40264232        rs1377103       A       C       .       PASS    AA=C;DP=117     GT:GQ:DP        0|0:78:32       1|1:33:24       0|1:100:60
+13     32419718        .       C       T       .       PASS    AA=C;DP=126     GT:GQ:DP        0|0:78:33       0|1:100:23      0|0:100:71
+18     60641620        .       C       T       .       PASS    AA=C;DP=111     GT:GQ:DP        0|0:78:33       1|0:67:20       0|1:100:56
+19     57001352        rs59974934      G       C       .       PASS    AA=g;DP=114     GT:GQ:DP        0|0:78:33       1|0:76:16       0|1:100:65
+13     40943043        rs3783198       T       C       .       PASS    AA=T;DP=110     GT:GQ:DP        0|0:78:34       0|1:100:20      0|0:100:53
+10     29635839        .       A       G       .       PASS    AA=G;DP=122     GT:GQ:DP        0|0:78:34       0|1:100:21      0|0:100:71
+2      157341750       .       T       C       .       PASS    AA=T;DP=108     GT:GQ:DP        0|0:78:35       1|0:92:23       0|1:100:50
+22     21848251        rs5759630       A       C       .       PASS    AA=A;DP=153     GT:GQ:DP        0|0:78:36       0|1:100:15      0|0:100:53
+6      40472978        .       C       G       .       PASS    AA=C;DP=134     GT:GQ:DP        0|0:78:36       0|1:100:20      0|0:93:31
+14     68201715        rs17835218      C       T       .       PASS    AA=C;DP=138     GT:GQ:DP        0|0:78:36       0|1:100:21      0|0:100:65
+1      29715349        .       T       G       .       PASS    AA=T;DP=127     GT:GQ:DP        0|0:78:36       0|1:100:25      0|0:100:66
+16     9839795 rs9929000       A       G       .       PASS    AA=A;DP=110     GT:GQ:DP        0|0:78:36       0|1:100:27      0|0:100:50
+14     44943522        .       C       A       .       PASS    AA=C;DP=159     GT:GQ:DP        0|0:78:36       0|1:100:27      0|0:67:33
+18     25443804        .       C       T       .       PASS    AA=C;DP=124     GT:GQ:DP        0|0:78:37       1|0:100:21      0|1:100:66
+1      213726262       rs56728838      T       C       .       PASS    AA=C;DP=145     GT:GQ:DP        0|0:78:37       1|0:100:21      0|1:100:92
+11     36254773        .       C       T       .       PASS    AA=C;DP=163     GT:GQ:DP        0|0:78:37       1|0:100:22      0|1:100:104
+3      130253621       rs57919222      C       T       .       PASS    AA=C;DP=128     GT:GQ:DP        0|0:78:37       1|0:100:22      0|1:100:71
+9      116050093       rs4979360       A       G       .       PASS    AA=A;DP=158     GT:GQ:DP        0|0:78:37       1|0:100:25      0|1:100:52
+12     127155103       rs9738769       C       G       .       PASS    AA=G;DP=153     GT:GQ:DP        0|0:78:37       1|0:100:28      0|1:100:90
+5      154834298       rs1295238       A       G       .       PASS    AA=G;DP=135     GT:GQ:DP        0|0:78:37       1|0:100:29      0|1:100:69
+13     19420438        .       T       C       .       PASS    AA=T;DP=159     GT:GQ:DP        0|0:78:37       1|0:100:30      0|1:100:91
+19     203470  .       T       C       .       PASS    AA=.;DP=143     GT:GQ:DP        0|0:78:37       1|0:100:35      0|1:27:58
+9      97938303        .       C       A       .       PASS    AA=C;DP=111     GT:GQ:DP        0|0:78:37       1|0:82:18       0|1:100:57
+3      114207351       rs3732813       T       C       .       PASS    AA=T;DP=152     GT:GQ:DP        0|0:78:37       1|0:99:25       0|1:100:82
+7      72679066        rs6967028       T       C       .       PASS    AA=C;DP=156     GT:GQ:DP        0|0:78:38       0|1:100:27      0|0:100:91
+7      5424948 .       C       G       .       PASS    AA=G;DP=136     GT:GQ:DP        0|0:78:39       0|1:100:14      0|0:86:43
+15     61498044        rs59699185      T       G       .       PASS    AA=T;DP=101     GT:GQ:DP        0|0:78:42       1|0:98:11       0|1:100:37
+6      149923010       rs28843181      A       G       .       PASS    AA=A;DP=75      GT:GQ:DP        0|0:79:27       1|0:67:6        0|1:100:41
+1      111572054       rs58006689      G       A       .       PASS    AA=G;DP=141     GT:GQ:DP        0|0:79:27       1|0:87:28       0|1:100:73
+8      4150142 rs11779669      A       G       .       PASS    AA=G;DP=117     GT:GQ:DP        0|0:79:28       1|0:100:22      0|1:100:69
+19     19131658        rs12975566      T       A       .       PASS    AA=T;DP=127     GT:GQ:DP        0|0:79:30       1|0:100:19      0|1:100:79
+5      79347161        rs2438611       T       G       .       PASS    AA=G;DP=150     GT:GQ:DP        0|0:79:31       0|1:100:19      0|0:100:57
+16     11138204        rs7203459       T       C       .       PASS    AA=C;DP=119     GT:GQ:DP        0|0:79:31       0|1:100:21      0|0:100:66
+5      71877398        rs377638        C       T       .       PASS    AA=T;DP=135     GT:GQ:DP        0|0:79:31       0|1:100:23      0|0:100:83
+1      26444562        .       A       G       .       PASS    AA=A;DP=136     GT:GQ:DP        0|0:79:31       1|0:100:26      0|1:100:78
+10     75775681        rs11001006      T       C       .       PASS    AA=C;DP=109     GT:GQ:DP        0|0:79:31       1|0:79:23       0|1:100:55
+12     14839571        .       T       G       .       PASS    AA=T;DP=114     GT:GQ:DP        0|0:79:32       0|1:100:25      0|0:100:57
+3      112405018       .       A       C       .       PASS    AA=A;DP=117     GT:GQ:DP        0|0:79:32       1|0:100:19      0|1:100:66
+10     134342073       rs2767426       C       T       .       PASS    AA=C;DP=93      GT:GQ:DP        0|0:79:32       1|0:30:11       0|1:100:42
+9      32692631        rs28584243      G       C       .       PASS    AA=g;DP=96      GT:GQ:DP        0|0:79:32       1|0:79:22       0|1:100:44
+4      24685310        .       G       A       .       PASS    AA=G;DP=108     GT:GQ:DP        0|0:79:33       1|0:100:23      0|1:100:52
+14     98489922        rs60660364      A       G       .       PASS    AA=G;DP=129     GT:GQ:DP        0|0:79:33       1|0:99:16       0|1:100:38
+12     70569790        rs11830684      G       A       .       PASS    AA=A;DP=118     GT:GQ:DP        0|0:79:34       1|0:100:21      0|1:100:62
+7      71504130        rs61553902      C       A       .       PASS    AA=C;DP=134     GT:GQ:DP        0|0:79:34       1|0:100:23      0|1:100:84
+11     81090416        rs7109201       C       T       .       PASS    AA=T;DP=121     GT:GQ:DP        0|0:79:34       1|0:100:31      0|1:100:55
+13     38640607        .       G       T       .       PASS    AA=G;DP=148     GT:GQ:DP        0|0:79:35       0|1:100:26      0|0:100:88
+16     17664254        .       C       A       .       PASS    AA=C;DP=145     GT:GQ:DP        0|0:79:35       0|1:100:35      0|0:100:76
+12     107330998       rs2559884       A       G       .       PASS    AA=G;DP=152     GT:GQ:DP        0|0:79:36       0|1:100:18      0|0:100:58
+18     57858915        rs17069365      A       C       .       PASS    AA=A;DP=152     GT:GQ:DP        0|0:79:36       0|1:100:21      0|0:100:42
+2      489284  rs56277218      T       C       .       PASS    AA=T;DP=150     GT:GQ:DP        0|0:79:36       0|1:100:25      0|0:100:48
+10     80898384        rs7910211       T       C       .       PASS    AA=t;DP=170     GT:GQ:DP        0|0:79:36       1|0:100:23      0|1:100:53
+1      35416859        rs16837214      T       C       .       PASS    AA=T;DP=155;HM2;HM3     GT:GQ:DP        0|0:79:37       1|0:100:31      0|1:100:89
+20     25273334        .       G       T       .       PASS    AA=G;DP=135     GT:GQ:DP        0|0:79:38       1|1:67:25       0|1:100:75
+20     49075833        .       A       G       .       PASS    AA=A;DP=142     GT:GQ:DP        0|0:79:40       1|0:88:23       0|1:100:81
+6      26214580        rs9393686       C       A       .       PASS    AA=a;DP=111     GT:GQ:DP        0|0:7:27        0|1:100:28      0|0:76:55
+X      24962994        rs5986722       A       T       .       PASS    AA=A;DP=77      GT:GQ:DP        0|0:7:7 1|0:100:20      0|1:98:32
+19     1903935 .       G       A       .       PASS    AA=G;DP=95      GT:GQ:DP        0|0:80:25       0|1:100:10      0|0:100:49
+11     59179693        .       G       T       .       PASS    AA=G;DP=84      GT:GQ:DP        0|0:80:25       0|1:100:10      0|0:100:53
+1      164646056       rs12566803      C       T       .       PASS    AA=C;DP=95      GT:GQ:DP        0|0:80:25       0|1:100:10      0|0:100:60
+12     23089107        rs59702823      T       A       .       PASS    AA=T;DP=84      GT:GQ:DP        0|0:80:25       0|1:100:12      0|0:100:43
+20     20040928        rs59380881      G       A       .       PASS    AA=G;DP=98      GT:GQ:DP        0|0:80:25       0|1:100:12      0|0:100:63
+5      155273328       rs7728169       A       T       .       PASS    AA=-;DP=73      GT:GQ:DP        0|0:80:25       0|1:100:12      0|0:56:27
+20     24787937        .       C       A       .       PASS    AA=C;DP=90      GT:GQ:DP        0|0:80:25       0|1:100:13      0|0:100:52
+3      78769540        .       T       G       .       PASS    AA=T;DP=105     GT:GQ:DP        0|0:80:25       0|1:100:13      0|0:100:66
+2      38715727        rs7578356       A       C       .       PASS    AA=A;DP=91      GT:GQ:DP        0|0:80:25       0|1:100:15      0|0:100:48
+2      41717904        rs10191984      G       C       .       PASS    AA=G;DP=101     GT:GQ:DP        0|0:80:25       0|1:100:15      0|0:100:50
+1      96329075        rs223241        C       T       .       PASS    AA=C;DP=95;HM2;HM3      GT:GQ:DP        0|0:80:25       0|1:100:15      0|0:100:58
+5      123198671       .       C       T       .       PASS    AA=C;DP=103     GT:GQ:DP        0|0:80:25       0|1:100:15      0|0:100:58
+17     70468797        .       G       A       .       PASS    AA=G;DP=111     GT:GQ:DP        0|0:80:25       0|1:100:15      0|0:100:70
+1      5780528 .       C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        0|0:80:25       0|1:100:15      0|0:100:72
+21     43339763        rs2401192       G       A       .       PASS    AA=G;DP=86      GT:GQ:DP        0|0:80:25       0|1:100:16      0|0:92:37
+2      127491393       rs57302498      C       T       .       PASS    AA=C;DP=119     GT:GQ:DP        0|0:80:25       0|1:100:17      0|0:100:36
+2      224850330       .       G       A       .       PASS    AA=G;DP=89      GT:GQ:DP        0|0:80:25       0|1:100:17      0|0:100:46
+8      59627740        .       T       C       .       PASS    AA=T;DP=103     GT:GQ:DP        0|0:80:25       0|1:100:17      0|0:100:59
+7      80425673        rs740210        A       G       .       PASS    AA=A;DP=115     GT:GQ:DP        0|0:80:25       0|1:100:17      0|0:100:60
+2      100425947       .       G       T       .       PASS    AA=G;DP=106     GT:GQ:DP        0|0:80:25       0|1:100:17      0|0:100:64
+7      40787166        rs10499618      T       C       .       PASS    AA=T;DP=107     GT:GQ:DP        0|0:80:25       0|1:100:17      0|0:100:64
+3      195043545       rs7610085       G       C       .       PASS    AA=G;DP=117     GT:GQ:DP        0|0:80:25       0|1:100:17      0|0:100:75
+18     74362820        .       C       T       .       PASS    AA=C;DP=126     GT:GQ:DP        0|0:80:25       0|1:100:17      0|0:100:83
+17     72718938        rs7218309       T       G       .       PASS    AA=T;DP=127     GT:GQ:DP        0|0:80:25       0|1:100:17      0|0:100:87
+14     77006770        rs11159264      T       C       .       PASS    AA=C;DP=134     GT:GQ:DP        0|0:80:25       0|1:100:18      0|0:100:47
+3      190391068       .       C       T       .       PASS    AA=C;DP=96      GT:GQ:DP        0|0:80:25       0|1:100:18      0|0:100:53
+1      72042140        .       G       A       .       PASS    AA=G;DP=98      GT:GQ:DP        0|0:80:25       0|1:100:18      0|0:100:54
+2      17181846        rs1911685       A       T       .       PASS    AA=A;DP=99      GT:GQ:DP        0|0:80:25       0|1:100:18      0|0:100:56
+5      109524035       rs6594434       G       A       .       PASS    AA=G;DP=100     GT:GQ:DP        0|0:80:25       0|1:100:18      0|0:100:60
+20     50363998        .       G       A       .       PASS    AA=G;DP=108     GT:GQ:DP        0|0:80:25       0|1:100:18      0|0:100:65
+22     32090441        .       C       T       .       PASS    AA=C;DP=105     GT:GQ:DP        0|0:80:25       0|1:100:18      0|0:100:65
+2      19680477        .       C       T       .       PASS    AA=C;DP=112     GT:GQ:DP        0|0:80:25       0|1:100:18      0|0:100:72
+8      50875066        rs6997063       T       C       .       PASS    AA=T;DP=118     GT:GQ:DP        0|0:80:25       0|1:100:18      0|0:100:72
+8      64898322        rs4737659       G       T       .       PASS    AA=G;DP=115     GT:GQ:DP        0|0:80:25       0|1:100:18      0|0:100:72
+21     33722819        .       T       C       .       PASS    AA=T;DP=128     GT:GQ:DP        0|0:80:25       0|1:100:18      0|0:100:86
+5      12408920        .       T       C       .       PASS    AA=T;DP=101     GT:GQ:DP        0|0:80:25       0|1:100:19      0|0:100:55
+8      143505598       rs9720227       C       A       .       PASS    AA=A;DP=106     GT:GQ:DP        0|0:80:25       0|1:100:19      0|0:100:61
+3      23290202        .       T       C       .       PASS    AA=T;DP=118     GT:GQ:DP        0|0:80:25       0|1:100:19      0|0:100:75
+22     22251529        rs5996578       T       G       .       PASS    AA=N;DP=119     GT:GQ:DP        0|0:80:25       0|1:100:19      0|0:100:78
+2      13445927        .       T       C       .       PASS    AA=-;DP=86      GT:GQ:DP        0|0:80:25       0|1:100:19      0|0:81:41
+4      104832785       .       T       C       .       PASS    AA=T;DP=86      GT:GQ:DP        0|0:80:25       0|1:100:19      0|0:93:32
+4      181294607       rs63537860      A       T       .       PASS    AA=T;DP=92      GT:GQ:DP        0|0:80:25       0|1:100:20      0|0:100:48
+3      86411651        rs2324885       C       T       .       PASS    AA=C;DP=96      GT:GQ:DP        0|0:80:25       0|1:100:20      0|0:100:50
+13     81087617        rs9574932       G       A       .       PASS    AA=g;DP=97      GT:GQ:DP        0|0:80:25       0|1:100:20      0|0:100:54
+16     76070766        .       C       T       .       PASS    AA=C;DP=108     GT:GQ:DP        0|0:80:25       0|1:100:20      0|0:100:54
+3      120742144       .       A       T       .       PASS    AA=A;DP=106     GT:GQ:DP        0|0:80:25       0|1:100:20      0|0:100:60
+20     37730669        rs1123102       A       G       .       PASS    AA=G;DP=120     GT:GQ:DP        0|0:80:25       0|1:100:20      0|0:100:75
+4      30650855        rs6821602       C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        0|0:80:25       0|1:100:20      0|0:100:80
+15     25313569        rs8028000       C       T       .       PASS    AA=T;DP=128     GT:GQ:DP        0|0:80:25       0|1:100:21      0|0:100:37
+12     71793612        rs11179553      A       T       .       PASS    AA=A;DP=103     GT:GQ:DP        0|0:80:25       0|1:100:21      0|0:100:53
+16     20017324        rs61560613      G       A       .       PASS    AA=G;DP=114     GT:GQ:DP        0|0:80:25       0|1:100:21      0|0:100:65
+2      138175109       rs9283455       C       T       .       PASS    AA=C;DP=111     GT:GQ:DP        0|0:80:25       0|1:100:21      0|0:100:67
+2      62839980        .       T       G       .       PASS    AA=T;DP=117     GT:GQ:DP        0|0:80:25       0|1:100:21      0|0:100:73
+20     3024936 rs58634603      G       A       .       PASS    AA=G;DP=119     GT:GQ:DP        0|0:80:25       0|1:100:21      0|0:100:74
+19     33062105        rs4805695       C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        0|0:80:25       0|1:100:21      0|0:100:77
+5      171491009       rs13435925      A       G       .       PASS    AA=A;DP=127     GT:GQ:DP        0|0:80:25       0|1:100:21      0|0:100:82
+9      5247430 rs11506293      A       G       .       PASS    AA=A;DP=95      GT:GQ:DP        0|0:80:25       0|1:100:22      0|0:100:46
+2      77037955        .       T       G       .       PASS    AA=T;DP=102     GT:GQ:DP        0|0:80:25       0|1:100:22      0|0:100:56
+13     33409210        .       G       A       .       PASS    AA=G;DP=108     GT:GQ:DP        0|0:80:25       0|1:100:22      0|0:100:62
+2      168604740       .       T       C       .       PASS    AA=T;DP=114     GT:GQ:DP        0|0:80:25       0|1:100:22      0|0:100:65
+6      45043941        .       G       T       .       PASS    AA=G;DP=117     GT:GQ:DP        0|0:80:25       0|1:100:22      0|0:100:73
+7      155491810       rs56354640      A       G       .       PASS    AA=A;DP=121     GT:GQ:DP        0|0:80:25       0|1:100:22      0|0:100:73
+6      86572513        .       G       A       .       PASS    AA=g;DP=124     GT:GQ:DP        0|0:80:25       0|1:100:22      0|0:100:82
+11     97767315        rs4754508       A       T       .       PASS    AA=A;DP=87      GT:GQ:DP        0|0:80:25       0|1:100:23      0|0:100:39
+12     114689568       .       T       C       .       PASS    AA=T;DP=147     GT:GQ:DP        0|0:80:25       0|1:100:23      0|0:100:50
+18     24779691        rs531300        A       G       .       PASS    AA=A;DP=98      GT:GQ:DP        0|0:80:25       0|1:100:23      0|0:100:50
+8      2782113 .       C       T       .       PASS    AA=C;DP=103     GT:GQ:DP        0|0:80:25       0|1:100:23      0|0:100:55
+1      194185011       .       G       A       .       PASS    AA=G;DP=114     GT:GQ:DP        0|0:80:25       0|1:100:23      0|0:100:60
+11     37710301        .       C       T       .       PASS    AA=C;DP=127     GT:GQ:DP        0|0:80:25       0|1:100:23      0|0:100:78
+13     106621866       .       C       T       .       PASS    AA=c;DP=122     GT:GQ:DP        0|0:80:25       0|1:100:23      0|0:67:29
+X      15860246        .       G       A       .       PASS    AA=g;DP=105     GT:GQ:DP        0|0:80:25       0|1:100:23      0|0:87:29
+21     14435479        rs2822428       T       C       .       PASS    AA=T;DP=96      GT:GQ:DP        0|0:80:25       0|1:100:24      0|0:100:48
+2      195606258       rs17823191      G       A       .       PASS    AA=A;DP=108     GT:GQ:DP        0|0:80:25       0|1:100:24      0|0:100:59
+2      66768786        .       G       T       .       PASS    AA=G;DP=106     GT:GQ:DP        0|0:80:25       0|1:100:24      0|0:100:59
+7      53486564        .       T       C       .       PASS    AA=T;DP=119     GT:GQ:DP        0|0:80:25       0|1:100:24      0|0:100:69
+11     55988276        .       A       G       .       PASS    AA=a;DP=122     GT:GQ:DP        0|0:80:25       0|1:100:24      0|0:100:74
+3      89133   rs954824        T       C       .       PASS    AA=T;DP=123     GT:GQ:DP        0|0:80:25       0|1:100:24      0|0:100:77
+2      197837615       rs7580108       A       G       .       PASS    AA=A;DP=131     GT:GQ:DP        0|0:80:25       0|1:100:24      0|0:100:80
+2      5580263 rs7566447       C       T       .       PASS    AA=T;DP=97      GT:GQ:DP        0|0:80:25       0|1:100:25      0|0:100:47
+3      67775093        rs11707967      A       T       .       PASS    AA=A;DP=110     GT:GQ:DP        0|0:80:25       0|1:100:25      0|0:100:63
+1      5251752 rs1886954       C       A       .       PASS    AA=C;DP=121;HM2 GT:GQ:DP        0|0:80:25       0|1:100:25      0|0:100:69
+7      96771518        rs10242680      G       A       .       PASS    AA=.;DP=113     GT:GQ:DP        0|0:80:25       0|1:100:26      0|0:100:64
+5      100675344       .       C       T       .       PASS    AA=C;DP=126     GT:GQ:DP        0|0:80:25       0|1:100:26      0|0:100:72
+2      108857722       rs17036957      G       A       .       PASS    AA=G;DP=129     GT:GQ:DP        0|0:80:25       0|1:100:26      0|0:100:75
+10     57122929        .       T       C       .       PASS    AA=T;DP=128     GT:GQ:DP        0|0:80:25       0|1:100:26      0|0:100:82
+6      87277495        rs1112672       C       T       .       PASS    AA=c;DP=136     GT:GQ:DP        0|0:80:25       0|1:100:26      0|0:100:87
+11     76262301        rs9326485       C       G       .       PASS    AA=C;DP=141     GT:GQ:DP        0|0:80:25       0|1:100:27      0|0:100:45
+4      64010039        .       G       A       .       PASS    AA=G;DP=118     GT:GQ:DP        0|0:80:25       0|1:100:27      0|0:100:67
+7      95397951        rs17775819      G       C       .       PASS    AA=G;DP=126     GT:GQ:DP        0|0:80:25       0|1:100:27      0|0:100:73
+12     82487365        .       T       C       .       PASS    AA=C;DP=133     GT:GQ:DP        0|0:80:25       0|1:100:27      0|0:100:82
+6      81798035        rs9361714       G       T       .       PASS    AA=G;DP=112     GT:GQ:DP        0|0:80:25       0|1:100:28      0|0:100:59
+17     64355563        rs17744276      T       A       .       PASS    AA=T;DP=123     GT:GQ:DP        0|0:80:25       0|1:100:28      0|0:100:71
+16     17141541        rs4782031       C       T       .       PASS    AA=C;DP=132     GT:GQ:DP        0|0:80:25       0|1:100:28      0|0:100:76
+10     77032024        .       T       G       .       PASS    AA=T;DP=127     GT:GQ:DP        0|0:80:25       0|1:100:28      0|0:100:77
+10     35693942        .       A       G       .       PASS    AA=A;DP=141     GT:GQ:DP        0|0:80:25       0|1:100:28      0|0:100:86
+1      244270611       rs35035147      T       C       .       PASS    AA=T;DP=114     GT:GQ:DP        0|0:80:25       0|1:100:29      0|0:100:62
+3      8800347 .       C       A       .       PASS    AA=C;DP=122     GT:GQ:DP        0|0:80:25       0|1:100:29      0|0:100:69
+7      86862769        .       T       G       .       PASS    AA=T;DP=130     GT:GQ:DP        0|0:80:25       0|1:100:29      0|0:100:75
+9      1737566 rs10116103      C       T       .       PASS    AA=T;DP=129     GT:GQ:DP        0|0:80:25       0|1:100:29      0|0:100:75
+21     30465371        .       A       G       .       PASS    AA=A;DP=130     GT:GQ:DP        0|0:80:25       0|1:100:29      0|0:100:76
+15     28116601        .       C       T       .       PASS    AA=N;DP=143     GT:GQ:DP        0|0:80:25       0|1:100:29      0|0:100:90
+7      125665318       .       G       A       .       PASS    AA=G;DP=121     GT:GQ:DP        0|0:80:25       0|1:100:30      0|0:100:63
+10     9778281 rs2027297       C       T       .       PASS    AA=T;DP=120     GT:GQ:DP        0|0:80:25       0|1:100:30      0|0:100:70
+11     17497598        rs11024317      C       T       .       PASS    AA=T;DP=121     GT:GQ:DP        0|0:80:25       0|1:100:30      0|0:100:70
+2      12545829        .       T       A       .       PASS    AA=T;DP=124     GT:GQ:DP        0|0:80:25       0|1:100:30      0|0:100:70
+16     7983400 .       T       A       .       PASS    AA=T;DP=136     GT:GQ:DP        0|0:80:25       0|1:100:30      0|0:100:81
+13     74183388        .       A       G       .       PASS    AA=G;DP=105     GT:GQ:DP        0|0:80:25       0|1:100:31      0|0:100:49
+15     49401416        rs10163138      C       T       .       PASS    AA=T;DP=153     GT:GQ:DP        0|0:80:25       0|1:100:31      0|0:100:52
+18     28679157        rs16963930      G       A       .       PASS    AA=G;DP=121     GT:GQ:DP        0|0:80:25       0|1:100:31      0|0:100:67
+1      37350300        rs16823810      C       G       .       PASS    AA=C;DP=153;HM2;HM3     GT:GQ:DP        0|0:80:25       0|1:100:32      0|0:100:50
+1      74700857        rs45495399      A       C       .       PASS    AA=A;DP=112     GT:GQ:DP        0|0:80:25       0|1:100:32      0|0:100:59
+14     24684050        .       T       C       .       PASS    AA=T;DP=135     GT:GQ:DP        0|0:80:25       0|1:100:32      0|0:100:80
+3      32639599        rs13093648      C       T       .       PASS    AA=C;DP=130     GT:GQ:DP        0|0:80:25       0|1:100:35      0|0:100:73
+13     28537523        rs2475548       T       C       .       PASS    AA=T;DP=149     GT:GQ:DP        0|0:80:25       0|1:100:37      0|0:100:84
+12     3839477 rs11062874      A       G       .       PASS    AA=G;DP=138     GT:GQ:DP        0|0:80:25       0|1:100:39      0|0:100:73
+1      31171504        .       T       C       .       PASS    AA=T;DP=147     GT:GQ:DP        0|0:80:25       0|1:100:40      0|0:100:81
+2      127253560       rs34686446      A       G       .       PASS    AA=a;DP=110     GT:GQ:DP        0|0:80:26       0|1:100:12      0|0:100:71
+5      18792968        .       C       T       .       PASS    AA=C;DP=91      GT:GQ:DP        0|0:80:26       0|1:100:13      0|0:100:50
+18     50717311        rs12607983      A       G       .       PASS    AA=A;DP=97      GT:GQ:DP        0|0:80:26       0|1:100:14      0|0:100:56
+9      6836949 rs4609249       C       T       .       PASS    AA=c;DP=113     GT:GQ:DP        0|0:80:26       0|1:100:14      0|0:100:71
+2      214462248       rs2556314       A       G       .       PASS    AA=A;DP=84      GT:GQ:DP        0|0:80:26       0|1:100:14      0|0:90:43
+19     3974746 .       C       T       .       PASS    AA=C;DP=113     GT:GQ:DP        0|0:80:26       0|1:100:15      0|0:100:73
+13     55634120        rs9537332       C       T       .       PASS    AA=C;DP=82      GT:GQ:DP        0|0:80:26       0|1:100:15      0|0:39:24
+3      6187123 rs13083890      C       T       .       PASS    AA=C;DP=99      GT:GQ:DP        0|0:80:26       0|1:100:16      0|0:100:54
+16     2781482 rs28636891      G       T       .       PASS    AA=g;DP=117     GT:GQ:DP        0|0:80:26       0|1:100:18      0|0:100:74
+2      121079468       rs2871726       T       C       .       PASS    AA=T;DP=117     GT:GQ:DP        0|0:80:26       0|1:100:18      0|0:100:74
+19     43278315        rs1654364       G       A       .       PASS    AA=G;DP=121     GT:GQ:DP        0|0:80:26       0|1:100:18      0|0:100:77
+4      142787828       rs17007476      G       C       .       PASS    AA=C;DP=127     GT:GQ:DP        0|0:80:26       0|1:100:18      0|0:100:85
+12     47042242        rs17122922      A       G       .       PASS    AA=A;DP=115     GT:GQ:DP        0|0:80:26       0|1:100:19      0|0:100:68
+6      142540996       .       A       G       .       PASS    AA=A;DP=109     GT:GQ:DP        0|0:80:26       0|1:100:19      0|0:100:68
+18     70171820        rs6566798       G       A       .       PASS    AA=G;DP=120     GT:GQ:DP        0|0:80:26       0|1:100:20      0|0:100:70
+2      165167735       .       A       G       .       PASS    AA=A;DP=127     GT:GQ:DP        0|0:80:26       0|1:100:21      0|0:100:37
+7      103257364       .       A       G       .       PASS    AA=A;DP=113     GT:GQ:DP        0|0:80:26       0|1:100:21      0|0:100:64
+9      8844234 rs56027406      A       G       .       PASS    AA=A;DP=88      GT:GQ:DP        0|0:80:26       0|1:100:21      0|0:83:31
+20     36005342        rs6021982       G       A       .       PASS    AA=G;DP=111     GT:GQ:DP        0|0:80:26       0|1:100:22      0|0:100:62
+9      30125565        .       C       G       .       PASS    AA=C;DP=125     GT:GQ:DP        0|0:80:26       0|1:100:23      0|0:100:75
+5      71258845        .       A       G       .       PASS    AA=A;DP=132     GT:GQ:DP        0|0:80:26       0|1:100:23      0|0:100:82
+6      150738397       rs617594        A       G       .       PASS    AA=A;DP=131     GT:GQ:DP        0|0:80:26       0|1:100:23      0|0:100:87
+10     132414011       rs35857155      G       A       .       PASS    AA=G;DP=100     GT:GQ:DP        0|0:80:26       0|1:100:23      0|0:82:44
+9      38522979        .       C       T       .       PASS    AA=.;DP=111     GT:GQ:DP        0|0:80:26       0|1:100:24      0|0:100:62
+2      19610952        .       C       T       .       PASS    AA=C;DP=124     GT:GQ:DP        0|0:80:26       0|1:100:24      0|0:100:68
+12     15119973        .       T       C       .       PASS    AA=C;DP=101     GT:GQ:DP        0|0:80:26       0|1:100:26      0|0:100:49
+11     13195745        .       G       A       .       PASS    AA=G;DP=124     GT:GQ:DP        0|0:80:26       0|1:100:26      0|0:100:64
+9      88515550        .       A       G       .       PASS    AA=A;DP=126     GT:GQ:DP        0|0:80:26       0|1:100:26      0|0:100:74
+18     38240765        .       A       G       .       PASS    AA=A;DP=118     GT:GQ:DP        0|0:80:26       0|1:100:27      0|0:100:64
+2      127222169       .       C       T       .       PASS    AA=C;DP=119     GT:GQ:DP        0|0:80:26       0|1:100:27      0|0:100:67
+5      26851068        rs4540146       A       G       .       PASS    AA=A;DP=121     GT:GQ:DP        0|0:80:26       0|1:100:27      0|0:100:70
+3      72594231        .       C       G       .       PASS    AA=C;DP=126     GT:GQ:DP        0|0:80:26       0|1:100:27      0|0:100:75
+9      38325475        rs1885493       A       G       .       PASS    AA=A;DP=137     GT:GQ:DP        0|0:80:26       0|1:100:27      0|0:100:85
+8      87401668        rs2976178       C       G       .       PASS    AA=C;DP=126     GT:GQ:DP        0|0:80:26       0|1:100:28      0|0:100:35
+1      167008442       rs10800380      T       C       .       PASS    AA=T;DP=137;HM2;HM3     GT:GQ:DP        0|0:80:26       0|1:100:28      0|0:100:83
+2      144368845       .       G       C       .       PASS    AA=G;DP=134     GT:GQ:DP        0|0:80:26       0|1:100:28      0|0:100:83
+10     41753203        .       T       C       .       PASS    AA=.;DP=113     GT:GQ:DP        0|0:80:26       0|1:100:29      0|0:100:60
+7      39180151        rs10229456      G       C       .       PASS    AA=G;DP=124     GT:GQ:DP        0|0:80:26       0|1:100:29      0|0:100:71
+9      104773616       rs2211427       A       G       .       PASS    AA=A;DP=131     GT:GQ:DP        0|0:80:26       0|1:100:29      0|0:100:73
+7      10984324        rs17163856      A       C       .       PASS    AA=A;DP=129     GT:GQ:DP        0|0:80:26       0|1:100:29      0|0:100:76
+5      5833625 .       G       A       .       PASS    AA=G;DP=113     GT:GQ:DP        0|0:80:26       0|1:100:30      0|0:100:58
+6      64592133        .       A       G       .       PASS    AA=A;DP=116     GT:GQ:DP        0|0:80:26       0|1:100:31      0|0:100:47
+1      98877957        .       A       G       .       PASS    AA=A;DP=129     GT:GQ:DP        0|0:80:26       0|1:100:31      0|0:100:72
+12     127354123       rs1872541       C       T       .       PASS    AA=C;DP=141     GT:GQ:DP        0|0:80:26       0|1:100:33      0|0:100:83
+3      175197293       .       A       G       .       PASS    AA=G;DP=146     GT:GQ:DP        0|0:80:26       0|1:100:34      0|0:100:40
+8      13160233        rs35889186      T       G       .       PASS    AA=T;DP=82      GT:GQ:DP        0|0:80:26       1|0:100:11      0|1:100:46
+5      120915539       rs13156309      A       T       .       PASS    AA=A;DP=77      GT:GQ:DP        0|0:80:26       1|0:100:12      0|1:100:39
+4      116769153       .       G       T       .       PASS    AA=G;DP=98      GT:GQ:DP        0|0:80:26       1|0:100:13      0|1:100:59
+21     31886158        rs2833467       C       T       .       PASS    AA=T;DP=105     GT:GQ:DP        0|0:80:26       1|0:100:13      0|1:100:64
+2      226589975       rs1401062       A       T       .       PASS    AA=T;DP=94      GT:GQ:DP        0|0:80:26       1|0:100:14      0|1:100:51
+8      66171887        rs56855681      T       C       .       PASS    AA=T;DP=92      GT:GQ:DP        0|0:80:26       1|0:100:14      0|1:100:51
+1      20435137        rs60091709      C       T       .       PASS    AA=C;DP=95      GT:GQ:DP        0|0:80:26       1|0:100:14      0|1:100:56
+1      40460719        rs16827064      C       T       .       PASS    AA=C;DP=113;HM2 GT:GQ:DP        0|0:80:26       1|0:100:14      0|1:100:71
+12     71962389        .       A       G       .       PASS    AA=A;DP=95      GT:GQ:DP        0|0:80:26       1|0:100:15      0|1:100:54
+7      20283636        .       A       T       .       PASS    AA=A;DP=92      GT:GQ:DP        0|0:80:26       1|0:100:16      0|1:100:50
+6      53151901        rs9370188       G       C       .       PASS    AA=G;DP=109     GT:GQ:DP        0|0:80:26       1|0:100:16      0|1:100:66
+4      78814964        .       A       G       .       PASS    AA=a;DP=121     GT:GQ:DP        0|0:80:26       1|0:100:16      0|1:100:79
+22     28635788        .       T       C       .       PASS    AA=T;DP=92      GT:GQ:DP        0|0:80:26       1|0:100:17      0|1:100:49
+7      47114455        .       C       T       .       PASS    AA=C;DP=102     GT:GQ:DP        0|0:80:26       1|0:100:17      0|1:100:58
+1      166480963       .       G       A       .       PASS    AA=G;DP=103     GT:GQ:DP        0|0:80:26       1|0:100:17      0|1:100:60
+14     20547456        rs10132100      T       C       .       PASS    AA=T;DP=112     GT:GQ:DP        0|0:80:26       1|0:100:17      0|1:100:69
+1      189500691       rs1246850       T       A       .       PASS    AA=T;DP=90      GT:GQ:DP        0|0:80:26       1|0:100:18      0|1:100:46
+17     48689085        rs12601546      G       A       .       PASS    AA=A;DP=96      GT:GQ:DP        0|0:80:26       1|0:100:18      0|1:100:51
+2      155887177       rs56170031      T       C       .       PASS    AA=T;DP=103     GT:GQ:DP        0|0:80:26       1|0:100:18      0|1:100:55
+12     61177673        rs7316437       T       C       .       PASS    AA=T;DP=103     GT:GQ:DP        0|0:80:26       1|0:100:18      0|1:100:60
+9      38126381        .       C       T       .       PASS    AA=C;DP=107     GT:GQ:DP        0|0:80:26       1|0:100:18      0|1:100:63
+9      7658843 rs3124028       T       G       .       PASS    AA=G;DP=105     GT:GQ:DP        0|0:80:26       1|0:100:18      0|1:100:63
+2      98875954        rs17022046      C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        0|0:80:26       1|0:100:18      0|1:100:64
+6      83547798        rs1588718       C       T       .       PASS    AA=C;DP=117     GT:GQ:DP        0|0:80:26       1|0:100:18      0|1:100:69
+8      3830407 rs2554728       T       C       .       PASS    AA=T;DP=117     GT:GQ:DP        0|0:80:26       1|0:100:19      0|1:100:33
+18     29117530        rs9962637       A       G       .       PASS    AA=A;DP=97      GT:GQ:DP        0|0:80:26       1|0:100:19      0|1:100:52
+9      134541046       rs10901197      T       G       .       PASS    AA=T;DP=98      GT:GQ:DP        0|0:80:26       1|0:100:19      0|1:100:54
+18     29443554        rs16964793      A       G       .       PASS    AA=A;DP=116     GT:GQ:DP        0|0:80:26       1|0:100:19      0|1:100:62
+7      86553359        rs10231806      T       C       .       PASS    AA=C;DP=111     GT:GQ:DP        0|0:80:26       1|0:100:19      0|1:100:65
+3      169417935       rs12107904      C       T       .       PASS    AA=C;DP=111     GT:GQ:DP        0|0:80:26       1|0:100:19      0|1:100:66
+19     57234396        .       C       G       .       PASS    AA=c;DP=125     GT:GQ:DP        0|0:80:26       1|0:100:20      0|1:100:36
+6      22821419        rs1024216       C       A       .       PASS    AA=A;DP=89      GT:GQ:DP        0|0:80:26       1|0:100:20      0|1:100:42
+7      27750916        .       T       C       .       PASS    AA=t;DP=109     GT:GQ:DP        0|0:80:26       1|0:100:20      0|1:100:63
+4      31001729        rs6830703       A       G       .       PASS    AA=A;DP=112     GT:GQ:DP        0|0:80:26       1|0:100:20      0|1:100:64
+7      111191089       .       G       A       .       PASS    AA=G;DP=114     GT:GQ:DP        0|0:80:26       1|0:100:20      0|1:100:69
+6      126009162       rs4897147       C       T       .       PASS    AA=T;DP=115     GT:GQ:DP        0|0:80:26       1|0:100:20      0|1:100:70
+4      142700845       rs57649692      T       A       .       PASS    AA=T;DP=127     GT:GQ:DP        0|0:80:26       1|0:100:21      0|1:100:42
+8      77832663        .       A       G       .       PASS    AA=G;DP=104     GT:GQ:DP        0|0:80:26       1|0:100:21      0|1:100:47
+5      164557946       rs6868442       C       G       .       PASS    AA=C;DP=95      GT:GQ:DP        0|0:80:26       1|0:100:21      0|1:100:48
+3      111130415       rs604985        G       T       .       PASS    AA=G;DP=101     GT:GQ:DP        0|0:80:26       1|0:100:21      0|1:100:56
+18     18427116        rs10438910      A       G       .       PASS    AA=A;DP=119     GT:GQ:DP        0|0:80:26       1|0:100:21      0|1:100:59
+2      152557894       rs13386515      A       G       .       PASS    AA=a;DP=112     GT:GQ:DP        0|0:80:26       1|0:100:21      0|1:100:66
+10     120183460       rs1246899       G       A       .       PASS    AA=-;DP=113     GT:GQ:DP        0|0:80:26       1|0:100:21      0|1:100:67
+15     94426261        .       T       A       .       PASS    AA=T;DP=124     GT:GQ:DP        0|0:80:26       1|0:100:21      0|1:100:69
+10     73636672        rs7900722       A       G       .       PASS    AA=a;DP=122     GT:GQ:DP        0|0:80:26       1|0:100:21      0|1:100:73
+3      164141221       .       C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        0|0:80:26       1|0:100:21      0|1:100:74
+17     14630312        rs8066386       T       A       .       PASS    AA=t;DP=126     GT:GQ:DP        0|0:80:26       1|0:100:21      0|1:100:80
+4      1089367 rs4974639       T       C       .       PASS    AA=C;DP=135     GT:GQ:DP        0|0:80:26       1|0:100:21      0|1:100:85
+4      185568172       .       C       T       .       PASS    AA=C;DP=134     GT:GQ:DP        0|0:80:26       1|0:100:21      0|1:100:89
+1      181199134       rs58892068      T       C       .       PASS    AA=T;DP=92      GT:GQ:DP        0|0:80:26       1|0:100:22      0|1:100:40
+18     10276830        .       G       A       .       PASS    AA=G;DP=100     GT:GQ:DP        0|0:80:26       1|0:100:22      0|1:100:41
+6      129217432       .       C       T       .       PASS    AA=C;DP=100     GT:GQ:DP        0|0:80:26       1|0:100:22      0|1:100:54
+6      26417857        .       G       C       .       PASS    AA=G;DP=102     GT:GQ:DP        0|0:80:26       1|0:100:22      0|1:100:54
+11     130170869       rs7946160       C       T       .       PASS    AA=C;DP=104     GT:GQ:DP        0|0:80:26       1|0:100:22      0|1:100:55
+5      17776350        rs1849840       A       G       .       PASS    AA=G;DP=104     GT:GQ:DP        0|0:80:26       1|0:100:22      0|1:100:57
+1      99924693        rs7512968       A       G       .       PASS    AA=G;DP=107;HM2 GT:GQ:DP        0|0:80:26       1|0:100:22      0|1:100:59
+10     66766023        .       C       T       .       PASS    AA=C;DP=104     GT:GQ:DP        0|0:80:26       1|0:100:22      0|1:100:59
+3      59498254        rs17275985      A       G       .       PASS    AA=A;DP=109     GT:GQ:DP        0|0:80:26       1|0:100:22      0|1:100:61
+2      56640263        .       A       T       .       PASS    AA=a;DP=114     GT:GQ:DP        0|0:80:26       1|0:100:22      0|1:100:66
+5      56993121        .       C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        0|0:80:26       1|0:100:22      0|1:100:67
+13     40567268        .       T       C       .       PASS    AA=T;DP=123     GT:GQ:DP        0|0:80:26       1|0:100:22      0|1:100:74
+17     23157610        rs61589465      A       G       .       PASS    AA=A;DP=127     GT:GQ:DP        0|0:80:26       1|0:100:22      0|1:100:78
+5      64060855        rs61326384      T       C       .       PASS    AA=T;DP=143     GT:GQ:DP        0|0:80:26       1|0:100:22      0|1:100:97
+4      18911876        rs61213442      A       C       .       PASS    AA=A;DP=118     GT:GQ:DP        0|0:80:26       1|0:100:23      0|1:100:29
+2      224096257       .       C       A       .       PASS    AA=C;DP=79      GT:GQ:DP        0|0:80:26       1|0:100:23      0|1:100:31
+10     106806850       .       C       G       .       PASS    AA=C;DP=139     GT:GQ:DP        0|0:80:26       1|0:100:23      0|1:100:45
+5      163853352       rs9314036       C       G       .       PASS    AA=C;DP=104     GT:GQ:DP        0|0:80:26       1|0:100:23      0|1:100:55
+3      41319889        rs10049199      A       G       .       PASS    AA=a;DP=108     GT:GQ:DP        0|0:80:26       1|0:100:23      0|1:100:58
+10     132210075       rs11017298      C       T       .       PASS    AA=c;DP=111     GT:GQ:DP        0|0:80:26       1|0:100:23      0|1:100:62
+2      59538418        .       A       T       .       PASS    AA=A;DP=113     GT:GQ:DP        0|0:80:26       1|0:100:23      0|1:100:62
+3      7676752 rs61471077      G       A       .       PASS    AA=G;DP=116     GT:GQ:DP        0|0:80:26       1|0:100:23      0|1:100:67
+3      176246363       .       G       A       .       PASS    AA=G;DP=116     GT:GQ:DP        0|0:80:26       1|0:100:23      0|1:100:70
+8      85169578        .       T       G       .       PASS    AA=G;DP=123     GT:GQ:DP        0|0:80:26       1|0:100:23      0|1:100:71
+8      138404087       .       G       T       .       PASS    AA=G;DP=119     GT:GQ:DP        0|0:80:26       1|0:100:23      0|1:100:73
+9      102900643       rs2987754       G       A       .       PASS    AA=G;DP=145     GT:GQ:DP        0|0:80:26       1|0:100:23      0|1:100:93
+10     85029695        rs10886067      G       A       .       PASS    AA=G;DP=100     GT:GQ:DP        0|0:80:26       1|0:100:24      0|1:100:49
+4      35467697        .       T       C       .       PASS    AA=T;DP=102     GT:GQ:DP        0|0:80:26       1|0:100:24      0|1:100:53
+7      20099928        .       A       G       .       PASS    AA=A;DP=121     GT:GQ:DP        0|0:80:26       1|0:100:24      0|1:100:71
+6      150968324       .       G       A       .       PASS    AA=g;DP=129     GT:GQ:DP        0|0:80:26       1|0:100:24      0|1:100:78
+4      135393589       .       A       T       .       PASS    AA=a;DP=79      GT:GQ:DP        0|0:80:26       1|0:100:25      0|1:100:23
+9      90449652        .       C       T       .       PASS    AA=C;DP=108     GT:GQ:DP        0|0:80:26       1|0:100:25      0|1:100:55
+2      181566208       .       C       G       .       PASS    AA=C;DP=115     GT:GQ:DP        0|0:80:26       1|0:100:25      0|1:100:63
+19     32754767        .       T       G       .       PASS    AA=.;DP=115     GT:GQ:DP        0|0:80:26       1|0:100:25      0|1:100:64
+14     77717340        .       C       T       .       PASS    AA=C;DP=121     GT:GQ:DP        0|0:80:26       1|0:100:25      0|1:100:69
+9      38177416        rs12003607      C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        0|0:80:26       1|0:100:25      0|1:100:70
+6      17194651        rs17621412      C       T       .       PASS    AA=C;DP=123     GT:GQ:DP        0|0:80:26       1|0:100:25      0|1:100:73
+15     57069633        .       C       G       .       PASS    AA=C;DP=127     GT:GQ:DP        0|0:80:26       1|0:100:25      0|1:100:79
+9      94383511        .       C       A       .       PASS    AA=C;DP=93      GT:GQ:DP        0|0:80:26       1|0:100:26      0|1:100:37
+12     18720485        rs520143        G       A       .       PASS    AA=G;DP=106     GT:GQ:DP        0|0:80:26       1|0:100:26      0|1:100:46
+1      232007621       .       A       T       .       PASS    AA=A;DP=115     GT:GQ:DP        0|0:80:26       1|0:100:26      0|1:100:48
+22     38096386        rs5757644       C       G       .       PASS    AA=C;DP=102     GT:GQ:DP        0|0:80:26       1|0:100:26      0|1:100:51
+4      123425744       rs28539125      C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        0|0:80:26       1|0:100:26      0|1:100:54
+8      3335834 rs2406292       A       C       .       PASS    AA=A;DP=107     GT:GQ:DP        0|0:80:26       1|0:100:26      0|1:100:55
+11     99472534        rs11222746      T       C       .       PASS    AA=t;DP=111     GT:GQ:DP        0|0:80:26       1|0:100:26      0|1:100:57
+16     81834711        rs12924378      T       G       .       PASS    AA=T;DP=129     GT:GQ:DP        0|0:80:26       1|0:100:26      0|1:100:76
+8      13336206        rs289616        C       T       .       PASS    AA=C;DP=130     GT:GQ:DP        0|0:80:26       1|0:100:26      0|1:100:80
+11     59991952        .       A       G       .       PASS    AA=A;DP=100     GT:GQ:DP        0|0:80:26       1|0:100:27      0|1:100:47
+16     7355302 rs17143487      C       T       .       PASS    AA=C;DP=109     GT:GQ:DP        0|0:80:26       1|0:100:27      0|1:100:54
+12     88614872        rs11105378      C       T       .       PASS    AA=C;DP=107     GT:GQ:DP        0|0:80:26       1|0:100:27      0|1:100:58
+9      111372680       rs13283089      A       G       .       PASS    AA=G;DP=115     GT:GQ:DP        0|0:80:26       1|0:100:27      0|1:100:62
+18     60051376        .       G       A       .       PASS    AA=G;DP=116     GT:GQ:DP        0|0:80:26       1|0:100:27      0|1:100:65
+2      33425294        rs10185344      T       G       .       PASS    AA=T;DP=129     GT:GQ:DP        0|0:80:26       1|0:100:27      0|1:100:77
+9      4310305 .       A       G       .       PASS    AA=A;DP=133     GT:GQ:DP        0|0:80:26       1|0:100:27      0|1:81:41
+1      168737116       .       T       C       .       PASS    AA=T;DP=143     GT:GQ:DP        0|0:80:26       1|0:100:28      0|1:100:44
+15     53461490        rs57648583      C       T       .       PASS    AA=C;DP=101     GT:GQ:DP        0|0:80:26       1|0:100:28      0|1:100:47
+2      208051063       rs6435379       A       G       .       PASS    AA=A;DP=118     GT:GQ:DP        0|0:80:26       1|0:100:28      0|1:100:64
+5      82345334        .       C       A       .       PASS    AA=C;DP=134     GT:GQ:DP        0|0:80:26       1|0:100:28      0|1:100:76
+18     32374562        rs60873112      A       G       .       PASS    AA=A;DP=142     GT:GQ:DP        0|0:80:26       1|0:100:28      0|1:100:89
+5      132699441       rs61552010      T       C       .       PASS    AA=T;DP=136     GT:GQ:DP        0|0:80:26       1|0:100:29      0|1:100:41
+2      73260514        .       T       C       .       PASS    AA=T;DP=115     GT:GQ:DP        0|0:80:26       1|0:100:29      0|1:100:63
+7      137517371       .       A       C       .       PASS    AA=A;DP=142     GT:GQ:DP        0|0:80:26       1|0:100:29      0|1:100:88
+1      229931860       .       T       A       .       PASS    AA=T;DP=119     GT:GQ:DP        0|0:80:26       1|0:100:30      0|1:100:65
+13     95382912        .       T       C       .       PASS    AA=T;DP=119     GT:GQ:DP        0|0:80:26       1|0:100:30      0|1:100:66
+4      151835183       rs11940442      C       T       .       PASS    AA=C;DP=133     GT:GQ:DP        0|0:80:26       1|0:100:30      0|1:100:75
+6      114074325       rs4945963       T       G       .       PASS    AA=T;DP=141     GT:GQ:DP        0|0:80:26       1|0:100:30      0|1:100:83
+2      162815123       .       G       T       .       PASS    AA=G;DP=122     GT:GQ:DP        0|0:80:26       1|0:100:31      0|1:100:64
+7      147669004       rs6955787       C       T       .       PASS    AA=C;DP=125     GT:GQ:DP        0|0:80:26       1|0:100:31      0|1:100:69
+4      181814794       rs2112580       C       T       .       PASS    AA=T;DP=129     GT:GQ:DP        0|0:80:26       1|0:100:31      0|1:100:74
+2      169912106       rs3729573       T       C       .       PASS    AA=T;DP=143     GT:GQ:DP        0|0:80:26       1|0:100:31      0|1:100:87
+8      14373066        rs6982219       A       C       .       PASS    AA=A;DP=102     GT:GQ:DP        0|0:80:26       1|0:100:32      0|1:100:44
+3      149098712       .       T       G       .       PASS    AA=T;DP=113     GT:GQ:DP        0|0:80:26       1|0:100:32      0|1:100:56
+5      120224507       rs58153092      C       G       .       PASS    AA=G;DP=129     GT:GQ:DP        0|0:80:26       1|0:100:32      0|1:100:66
+7      109954566       rs56021108      A       G       .       PASS    AA=A;DP=128     GT:GQ:DP        0|0:80:26       1|0:100:32      0|1:100:70
+17     49407153        .       T       C       .       PASS    AA=T;DP=136     GT:GQ:DP        0|0:80:26       1|0:100:34      0|1:100:75
+3      39628600        rs4676652       C       G       .       PASS    AA=C;DP=138     GT:GQ:DP        0|0:80:26       1|0:100:34      0|1:100:78
+16     50984358        rs9921890       G       A       .       PASS    AA=G;DP=126     GT:GQ:DP        0|0:80:26       1|0:13:22       0|1:100:79
+2      222784691       rs45597231      A       C       .       PASS    AA=A;DP=107     GT:GQ:DP        0|0:80:26       1|0:20:13       0|1:100:69
+1      155293595       rs11577418      G       A       .       PASS    AA=g;DP=110     GT:GQ:DP        0|0:80:26       1|0:27:16       0|1:100:70
+19     38599658        .       G       A       .       PASS    AA=G;DP=99      GT:GQ:DP        0|0:80:26       1|0:28:15       0|1:100:57
+5      145531608       .       G       C       .       PASS    AA=G;DP=95      GT:GQ:DP        0|0:80:26       1|0:35:17       0|1:100:51
+20     39897628        rs6029839       C       A       .       PASS    AA=A;DP=133     GT:GQ:DP        0|0:80:26       1|0:41:22       0|1:100:84
+6      133569265       rs7754501       A       G       .       PASS    AA=G;DP=106     GT:GQ:DP        0|0:80:26       1|0:46:16       0|1:100:63
+6      132249978       rs7767111       G       A       .       PASS    AA=A;DP=96      GT:GQ:DP        0|0:80:26       1|0:54:10       0|1:100:60
+2      29086443        rs58055236      G       A       .       PASS    AA=g;DP=81      GT:GQ:DP        0|0:80:26       1|0:55:12       0|1:100:33
+1      109200767       rs7550668       G       A       .       PASS    AA=A;DP=91      GT:GQ:DP        0|0:80:26       1|0:56:15       0|1:100:36
+2      230476677       .       T       C       .       PASS    AA=T;DP=102     GT:GQ:DP        0|0:80:26       1|0:56:15       0|1:100:63
+12     125492063       rs10459110      A       C       .       PASS    AA=C;DP=121     GT:GQ:DP        0|0:80:26       1|0:57:14       0|1:100:80
+6      149475616       rs57568826      G       A       .       PASS    AA=G;DP=91      GT:GQ:DP        0|0:80:26       1|0:62:14       0|1:100:48
+11     28984847        rs10767778      T       C       .       PASS    AA=t;DP=98      GT:GQ:DP        0|0:80:26       1|0:66:16       0|1:100:56
+21     43135074        rs1811079       T       G       .       PASS    AA=t;DP=95      GT:GQ:DP        0|0:80:26       1|0:66:8        0|1:100:62
+17     74631297        rs7217189       G       C       .       PASS    AA=C;DP=121     GT:GQ:DP        0|0:80:26       1|0:67:15       0|1:100:80
+1      10982111        .       A       G       .       PASS    AA=a;DP=94      GT:GQ:DP        0|0:80:26       1|0:70:18       0|1:100:50
+21     18083560        rs243609        C       T       .       PASS    AA=c;DP=97      GT:GQ:DP        0|0:80:26       1|0:72:14       0|1:100:56
+4      182856077       .       G       A       .       PASS    AA=A;DP=86      GT:GQ:DP        0|0:80:26       1|0:77:14       0|1:100:47
+2      199984412       rs6730784       G       A       .       PASS    AA=A;DP=104     GT:GQ:DP        0|0:80:26       1|0:79:17       0|1:100:62
+1      101429277       .       C       T       .       PASS    AA=C;DP=100     GT:GQ:DP        0|0:80:26       1|0:81:18       0|1:100:53
+4      107118248       .       T       A       .       PASS    AA=T;DP=128     GT:GQ:DP        0|0:80:26       1|0:82:21       0|1:100:79
+16     51267337        .       G       A       .       PASS    AA=G;DP=104     GT:GQ:DP        0|0:80:26       1|0:83:16       0|1:100:62
+2      133507368       rs61133672      G       T       .       PASS    AA=G;DP=126     GT:GQ:DP        0|0:80:26       1|0:83:21       0|1:100:67
+2      185012839       .       T       C       .       PASS    AA=T;DP=81      GT:GQ:DP        0|0:80:26       1|0:84:14       0|1:100:42
+2      141910262       rs4583398       A       G       .       PASS    AA=A;DP=101     GT:GQ:DP        0|0:80:26       1|0:84:21       0|1:100:55
+11     42140972        .       T       G       .       PASS    AA=G;DP=95      GT:GQ:DP        0|0:80:26       1|0:87:11       0|1:100:58
+17     2345114 rs8081804       C       G       .       PASS    AA=C;DP=109     GT:GQ:DP        0|0:80:26       1|0:89:17       0|1:100:66
+12     61830593        rs2228153       G       A       .       PASS    AA=G;DP=102     GT:GQ:DP        0|0:80:26       1|0:90:14       0|1:100:45
+4      70869453        rs58205829      G       A       .       PASS    AA=g;DP=125     GT:GQ:DP        0|0:80:26       1|0:90:18       0|1:100:79
+13     101730825       rs7338212       G       C       .       PASS    AA=G;DP=103     GT:GQ:DP        0|0:80:26       1|0:90:19       0|1:100:58
+20     41960930        rs7260790       G       A       .       PASS    AA=G;DP=112     GT:GQ:DP        0|0:80:26       1|0:91:18       0|1:100:66
+10     135165396       .       G       A       .       PASS    AA=g;DP=140     GT:GQ:DP        0|0:80:26       1|0:92:22       0|1:100:86
+3      97223946        rs10934321      G       A       .       PASS    AA=G;DP=96      GT:GQ:DP        0|0:80:26       1|0:92:23       0|1:100:46
+6      4663121 .       A       G       .       PASS    AA=A;DP=87      GT:GQ:DP        0|0:80:26       1|0:94:11       0|1:100:50
+11     13129349        .       A       C       .       PASS    AA=A;DP=116     GT:GQ:DP        0|0:80:26       1|0:94:19       0|1:100:72
+5      131585390       .       C       T       .       PASS    AA=C;DP=109     GT:GQ:DP        0|0:80:26       1|0:95:22       0|1:100:61
+12     42227206        rs10880524      C       T       .       PASS    AA=T;DP=113     GT:GQ:DP        0|0:80:26       1|0:95:22       0|1:100:66
+4      175177675       rs2332794       C       A       .       PASS    AA=C;DP=113     GT:GQ:DP        0|0:80:26       1|0:96:23       0|1:100:59
+5      114063338       .       G       C       .       PASS    AA=G;DP=115     GT:GQ:DP        0|0:80:26       1|0:96:26       0|1:100:59
+5      115871606       rs154597        C       G       .       PASS    AA=C;DP=87      GT:GQ:DP        0|0:80:26       1|0:97:17       0|1:100:44
+5      128414399       .       T       C       .       PASS    AA=T;DP=116     GT:GQ:DP        0|0:80:26       1|0:98:14       0|1:100:70
+5      3629646 rs12109060      C       T       .       PASS    AA=c;DP=128     GT:GQ:DP        0|0:80:26       1|0:98:22       0|1:100:36
+3      59329199        rs13097999      G       C       .       PASS    AA=G;DP=106     GT:GQ:DP        0|0:80:26       1|0:99:13       0|1:100:64
+12     84413236        rs12303249      G       A       .       PASS    AA=G;DP=112     GT:GQ:DP        0|0:80:26       1|0:99:22       0|1:100:66
+8      129482192       rs12676542      T       C       .       PASS    AA=C;DP=108     GT:GQ:DP        0|0:80:27       0|1:100:15      0|0:100:66
+2      55169830        rs6732105       G       A       .       PASS    AA=G;DP=91      GT:GQ:DP        0|0:80:27       0|1:100:19      0|0:100:35
+1      151493203       rs6666892       G       A       .       PASS    AA=G;DP=143     GT:GQ:DP        0|0:80:27       0|1:100:20      0|0:100:46
+11     85445562        rs10792823      G       A       .       PASS    AA=G;DP=123     GT:GQ:DP        0|0:80:27       0|1:100:20      0|0:100:75
+3      138783954       rs9842926       G       C       .       PASS    AA=G;DP=104     GT:GQ:DP        0|0:80:27       0|1:100:23      0|0:100:56
+13     36413388        .       T       C       .       PASS    AA=t;DP=109     GT:GQ:DP        0|0:80:27       0|1:100:23      0|0:100:60
+21     29853200        rs9680426       G       A       .       PASS    AA=A;DP=113     GT:GQ:DP        0|0:80:27       0|1:100:25      0|0:100:62
+1      115405058       rs11102880      G       A       .       PASS    AA=G;DP=146     GT:GQ:DP        0|0:80:27       0|1:100:25      0|0:100:86
+14     32269806        rs10146185      A       G       .       PASS    AA=A;DP=118     GT:GQ:DP        0|0:80:27       0|1:100:26      0|0:100:64
+1      174899156       rs12071948      C       T       .       PASS    AA=C;DP=144;HM2 GT:GQ:DP        0|0:80:27       0|1:100:27      0|0:99:43
+6      168312787       .       T       C       .       PASS    AA=C;DP=144     GT:GQ:DP        0|0:80:27       0|1:100:29      0|0:100:86
+11     82380637        .       T       C       .       PASS    AA=T;DP=133     GT:GQ:DP        0|0:80:27       0|1:100:33      0|0:100:75
+17     39058941        rs8079324       C       T       .       PASS    AA=C;DP=141     GT:GQ:DP        0|0:80:27       0|1:100:35      0|0:99:34
+1      207368020       rs11119226      A       T       .       PASS    AA=A;DP=86      GT:GQ:DP        0|0:80:27       1|0:100:11      0|1:100:38
+4      29223796        .       T       A       .       PASS    AA=T;DP=88      GT:GQ:DP        0|0:80:27       1|0:100:14      0|1:100:46
+8      69848526        .       A       G       .       PASS    AA=A;DP=126     GT:GQ:DP        0|0:80:27       1|0:100:14      0|1:100:87
+9      16620598        rs10124530      C       G       .       PASS    AA=C;DP=74      GT:GQ:DP        0|0:80:27       1|0:100:16      0|1:100:30
+14     44538851        .       T       C       .       PASS    AA=T;DP=106     GT:GQ:DP        0|0:80:27       1|0:100:16      0|1:100:63
+12     48824143        .       A       T       .       PASS    AA=A;DP=94      GT:GQ:DP        0|0:80:27       1|0:100:17      0|1:100:45
+14     55964636        rs1189150       G       A       .       PASS    AA=A;DP=104     GT:GQ:DP        0|0:80:27       1|0:100:17      0|1:100:59
+1      64712341        rs6687194       T       C       .       PASS    AA=T;DP=97      GT:GQ:DP        0|0:80:27       1|0:100:18      0|1:100:52
+17     40215157        rs61323209      G       C       .       PASS    AA=G;DP=96      GT:GQ:DP        0|0:80:27       1|0:100:19      0|1:100:44
+9      22990580        .       C       T       .       PASS    AA=C;DP=88      GT:GQ:DP        0|0:80:27       1|0:100:19      0|1:100:45
+18     29933438        rs9965493       G       A       .       PASS    AA=N;DP=136     GT:GQ:DP        0|0:80:27       1|0:100:19      0|1:100:48
+10     83235103        rs10883344      T       C       .       PASS    AA=T;DP=105     GT:GQ:DP        0|0:80:27       1|0:100:19      0|1:100:59
+14     39251964        rs59029375      G       A       .       PASS    AA=G;DP=99      GT:GQ:DP        0|0:80:27       1|0:100:20      0|1:100:55
+20     24075023        rs6049433       G       A       .       PASS    AA=G;DP=125     GT:GQ:DP        0|0:80:27       1|0:100:20      0|1:100:80
+20     1681128 .       T       C       .       PASS    AA=T;DP=118     GT:GQ:DP        0|0:80:27       1|0:100:21      0|1:100:30
+3      61484311        rs55733506      G       C       .       PASS    AA=G;DP=94      GT:GQ:DP        0|0:80:27       1|0:100:21      0|1:100:46
+12     115929428       .       G       T       .       PASS    AA=G;DP=115     GT:GQ:DP        0|0:80:27       1|0:100:21      0|1:100:69
+10     18924058        rs7075135       T       C       .       PASS    AA=T;DP=130     GT:GQ:DP        0|0:80:27       1|0:100:21      0|1:100:79
+18     64710366        .       T       C       .       PASS    AA=T;DP=126     GT:GQ:DP        0|0:80:27       1|0:100:22      0|1:100:78
+7      52681529        rs10253049      A       G       .       PASS    AA=G;DP=135     GT:GQ:DP        0|0:80:27       1|0:100:22      0|1:100:84
+2      196548502       rs2090669       G       A       .       PASS    AA=G;DP=115     GT:GQ:DP        0|0:80:27       1|0:100:23      0|1:100:66
+11     129578128       .       A       G       .       PASS    AA=a;DP=130     GT:GQ:DP        0|0:80:27       1|0:100:23      0|1:100:81
+19     37149982        .       C       T       .       PASS    AA=C;DP=132     GT:GQ:DP        0|0:80:27       1|0:100:23      0|1:100:85
+11     11785472        .       C       T       .       PASS    AA=C;DP=99      GT:GQ:DP        0|0:80:27       1|0:100:24      0|1:100:40
+3      99833030        rs6785928       G       T       .       PASS    AA=T;DP=124     GT:GQ:DP        0|0:80:27       1|0:100:24      0|1:100:67
+10     131450953       rs3829195       G       A       .       PASS    AA=A;DP=121     GT:GQ:DP        0|0:80:27       1|0:100:24      0|1:100:70
+5      156499963       rs56970068      C       A       .       PASS    AA=C;DP=121     GT:GQ:DP        0|0:80:27       1|0:100:24      0|1:100:71
+17     47189429        .       G       C       .       PASS    AA=G;DP=122     GT:GQ:DP        0|0:80:27       1|0:100:24      0|1:100:75
+4      89384942        .       G       C       .       PASS    AA=G;DP=121     GT:GQ:DP        0|0:80:27       1|0:100:25      0|1:100:70
+14     89737492        rs1959001       G       A       .       PASS    AA=G;DP=127     GT:GQ:DP        0|0:80:27       1|0:100:25      0|1:100:77
+8      122745661       .       C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        0|0:80:27       1|0:100:26      0|1:100:51
+10     24168944        rs11812592      A       G       .       PASS    AA=A;DP=114     GT:GQ:DP        0|0:80:27       1|0:100:26      0|1:100:57
+8      9276695 .       G       A       .       PASS    AA=G;DP=128     GT:GQ:DP        0|0:80:27       1|0:100:27      0|1:100:73
+15     66685823        rs12915441      C       G       .       PASS    AA=G;DP=136     GT:GQ:DP        0|0:80:27       1|0:100:27      0|1:100:85
+7      153647354       rs4726405       G       A       .       PASS    AA=A;DP=125     GT:GQ:DP        0|0:80:27       1|0:100:28      0|1:100:71
+11     33937425        rs58839254      T       C       .       PASS    AA=T;DP=125     GT:GQ:DP        0|0:80:27       1|0:100:28      0|1:100:73
+4      79211592        rs9284617       G       A       .       PASS    AA=G;DP=120     GT:GQ:DP        0|0:80:27       1|0:100:29      0|1:100:65
+2      136841524       .       A       T       .       PASS    AA=A;DP=135     GT:GQ:DP        0|0:80:27       1|0:100:29      0|1:100:77
+20     13475911        rs2001178       G       A       .       PASS    AA=A;DP=120     GT:GQ:DP        0|0:80:27       1|0:100:30      0|1:100:65
+1      82014213        rs11163361      G       A       .       PASS    AA=G;DP=124     GT:GQ:DP        0|0:80:27       1|0:100:30      0|1:100:66
+8      62690699        rs2350622       C       T       .       PASS    AA=C;DP=131     GT:GQ:DP        0|0:80:27       1|0:100:31      0|1:100:75
+10     19982665        .       C       T       .       PASS    AA=C;DP=131     GT:GQ:DP        0|0:80:27       1|0:100:31      0|1:100:76
+14     31039885        .       G       C       .       PASS    AA=G;DP=139     GT:GQ:DP        0|0:80:27       1|0:100:33      0|1:100:79
+21     39152064        rs455328        G       A       .       PASS    AA=G;DP=146     GT:GQ:DP        0|0:80:27       1|0:23:29       0|1:100:91
+19     51950682        rs2287717       C       T       .       PASS    AA=C;DP=78      GT:GQ:DP        0|0:80:27       1|0:27:4        0|1:100:39
+1      18240015        .       G       A       .       PASS    AA=A;DP=111     GT:GQ:DP        0|0:80:27       1|0:38:16       0|1:100:67
+12     60877027        rs1245639       G       A       .       PASS    AA=G;DP=81      GT:GQ:DP        0|0:80:27       1|0:45:8        0|1:100:36
+16     64173654        .       C       T       .       PASS    AA=T;DP=126     GT:GQ:DP        0|0:80:27       1|0:56:16       0|1:100:77
+3      2304012 rs1685439       A       G       .       PASS    AA=G;DP=107     GT:GQ:DP        0|0:80:27       1|0:60:22       0|1:100:58
+1      50804826        .       G       A       .       PASS    AA=G;DP=108     GT:GQ:DP        0|0:80:27       1|0:68:15       0|1:100:66
+21     22054037        rs2827015       G       A       .       PASS    AA=A;DP=122     GT:GQ:DP        0|0:80:27       1|0:76:25       0|1:100:72
+8      1412220 .       C       T       .       PASS    AA=C;DP=90      GT:GQ:DP        0|0:80:27       1|0:82:10       0|1:100:37
+1      225702212       .       C       A       .       PASS    AA=C;DP=101     GT:GQ:DP        0|0:80:27       1|0:82:15       0|1:100:55
+9      71901032        rs1927110       C       G       .       PASS    AA=G;DP=98      GT:GQ:DP        0|0:80:27       1|0:82:19       0|1:100:54
+13     109617855       rs1470428       T       C       .       PASS    AA=C;DP=101     GT:GQ:DP        0|0:80:27       1|0:85:17       0|1:100:54
+8      79543299        .       A       G       .       PASS    AA=A;DP=102     GT:GQ:DP        0|0:80:27       1|0:91:17       0|1:100:57
+16     78241634        rs8058676       C       G       .       PASS    AA=G;DP=121     GT:GQ:DP        0|0:80:27       1|0:91:20       0|1:100:76
+4      38832277        rs35040563      G       A       .       PASS    AA=G;DP=114     GT:GQ:DP        0|0:80:27       1|0:96:22       0|1:100:65
+20     44822959        .       G       A       .       PASS    AA=g;DP=126     GT:GQ:DP        0|0:80:27       1|0:96:26       0|1:100:75
+2      231132145       .       C       T       .       PASS    AA=C;DP=103     GT:GQ:DP        0|0:80:27       1|0:98:15       0|1:100:61
+2      119013848       .       G       A       .       PASS    AA=G;DP=102     GT:GQ:DP        0|0:80:28       0|1:100:13      0|0:100:60
+15     56541223        .       T       A       .       PASS    AA=T;DP=107     GT:GQ:DP        0|0:80:28       0|1:100:15      0|0:100:66
+4      107340728       rs62318075      T       C       .       PASS    AA=T;DP=125     GT:GQ:DP        0|0:80:28       0|1:100:27      0|0:100:71
+15     76415070        .       C       G       .       PASS    AA=c;DP=117     GT:GQ:DP        0|0:80:28       1|0:100:12      0|1:100:78
+3      38667260        rs9825294       A       G       .       PASS    AA=G;DP=105     GT:GQ:DP        0|0:80:28       1|0:100:16      0|1:100:61
+5      120314526       rs1895238       A       T       .       PASS    AA=T;DP=110     GT:GQ:DP        0|0:80:28       1|0:100:21      0|1:100:59
+12     79843215        rs17007693      T       C       .       PASS    AA=T;DP=117     GT:GQ:DP        0|0:80:28       1|0:100:25      0|1:100:63
+1      246615942       rs6660860       A       G       .       PASS    AA=N;DP=125     GT:GQ:DP        0|0:80:28       1|0:100:29      0|1:100:70
+20     22309396        rs172038        A       G       .       PASS    AA=G;DP=148     GT:GQ:DP        0|0:80:28       1|0:100:31      0|1:100:87
+8      112877589       rs4876883       T       C       .       PASS    AA=T;DP=106     GT:GQ:DP        0|0:80:28       1|0:40:16       0|1:100:62
+10     133232444       .       C       T       .       PASS    AA=C;DP=97      GT:GQ:DP        0|0:80:28       1|0:61:19       0|1:100:50
+1      8200984 rs58469805      G       C       .       PASS    AA=G;DP=106     GT:GQ:DP        0|0:80:28       1|0:71:11       0|1:100:68
+13     50048870        rs58716859      A       T       .       PASS    AA=A;DP=119     GT:GQ:DP        0|0:80:28       1|0:73:16       0|1:100:79
+14     89797502        rs11845329      C       T       .       PASS    AA=C;DP=127     GT:GQ:DP        0|0:80:28       1|0:75:20       0|1:100:80
+4      133902778       rs11728097      G       C       .       PASS    AA=G;DP=86      GT:GQ:DP        0|0:80:28       1|0:88:14       0|1:100:43
+12     8041925 rs11056817      G       A       .       PASS    AA=.;DP=77      GT:GQ:DP        0|0:80:28       1|0:90:17       0|1:100:23
+12     126544746       rs7312890       G       A       .       PASS    AA=A;DP=104     GT:GQ:DP        0|0:80:28       1|0:94:22       0|1:100:56
+9      100728528       rs10114761      A       G       .       PASS    AA=A;DP=115     GT:GQ:DP        0|0:80:29       0|1:100:16      0|0:100:72
+1      231237048       .       A       C       .       PASS    AA=A;DP=104     GT:GQ:DP        0|0:80:29       1|0:100:17      0|1:100:60
+19     56785068        .       C       T       .       PASS    AA=c;DP=114     GT:GQ:DP        0|0:80:29       1|0:100:21      0|1:100:42
+2      120210742       .       A       G       .       PASS    AA=G;DP=132     GT:GQ:DP        0|0:80:29       1|0:100:22      0|1:100:82
+11     2093198 .       C       T       .       PASS    AA=c;DP=95      GT:GQ:DP        0|0:80:29       1|0:53:17       0|1:100:48
+2      74995985        .       G       A       .       PASS    AA=G;DP=117     GT:GQ:DP        0|0:80:29       1|0:67:21       0|1:100:69
+6      154514161       .       G       A       .       PASS    AA=G;DP=124     GT:GQ:DP        0|0:80:29       1|0:81:18       0|1:100:81
+3      22136170        rs9310683       A       G       .       PASS    AA=G;DP=121     GT:GQ:DP        0|0:80:30       1|0:100:22      0|1:100:69
+1      183309977       .       A       G       .       PASS    AA=A;DP=141     GT:GQ:DP        0|0:80:31       0|1:100:19      0|0:100:92
+3      141849638       rs698664        G       A       .       PASS    AA=G;DP=130     GT:GQ:DP        0|0:80:31       0|1:100:25      0|0:100:76
+1      216263679       rs1490330       C       T       .       PASS    AA=T;DP=117     GT:GQ:DP        0|0:80:32       1|0:100:24      0|1:100:63
+7      52628128        rs1822227       A       T       .       PASS    AA=T;DP=105     GT:GQ:DP        0|0:80:32       1|0:100:26      0|1:100:36
+3      84135745        rs2204663       C       A       .       PASS    AA=C;DP=95      GT:GQ:DP        0|0:80:32       1|0:53:16       0|1:100:47
+3      114412767       rs11917368      C       T       .       PASS    AA=C;DP=135     GT:GQ:DP        0|0:80:32       1|0:62:11       0|1:100:48
+8      9855475 rs591346        C       T       .       PASS    AA=C;DP=129     GT:GQ:DP        0|0:80:33       0|1:100:14      0|0:100:83
+1      61669736        rs4915741       T       A       .       PASS    AA=A;DP=120;HM3 GT:GQ:DP        0|0:80:33       0|1:100:18      0|0:100:69
+17     27152712        .       C       A       .       PASS    AA=c;DP=120     GT:GQ:DP        0|0:80:33       0|1:100:21      0|0:100:68
+20     8260715 rs2745780       A       G       .       PASS    AA=G;DP=127     GT:GQ:DP        0|0:80:33       0|1:100:25      0|0:100:74
+1      12541854        rs4846113       A       C       .       PASS    AA=A;DP=103;HM2 GT:GQ:DP        0|0:80:33       1|0:100:20      0|1:100:52
+14     34256449        rs11851038      T       G       .       PASS    AA=G;DP=162     GT:GQ:DP        0|0:80:33       1|0:100:37      0|1:100:93
+16     29759239        rs2288043       C       T       .       PASS    AA=c;DP=131     GT:GQ:DP        0|0:80:34       1|0:100:15      0|1:100:79
+11     118293727       .       C       A       .       PASS    AA=C;DP=142     GT:GQ:DP        0|0:80:34       1|0:100:16      0|1:100:94
+9      92782139        rs296717        A       G       .       PASS    AA=A;DP=122     GT:GQ:DP        0|0:80:34       1|1:76:27       0|1:100:63
+8      70816625        rs10216572      C       A       .       PASS    AA=c;DP=134     GT:GQ:DP        0|0:80:36       0|1:100:21      0|0:100:76
+16     71937491        .       G       T       .       PASS    AA=G;DP=125     GT:GQ:DP        0|0:80:37       1|0:62:14       0|1:100:74
+14     52611520        .       C       T       .       PASS    AA=C;DP=169     GT:GQ:DP        0|0:80:38       0|1:100:28      0|0:100:58
+9      1502936 rs10810333      A       G       .       PASS    AA=A;DP=136     GT:GQ:DP        0|0:80:38       1|0:100:23      0|1:100:75
+1      186412827       rs354256        G       C       .       PASS    AA=C;DP=148;HM3 GT:GQ:DP        0|0:81:27       1|1:100:36      0|1:100:82
+2      10614048        rs1534399       G       A       .       PASS    AA=G;DP=83      GT:GQ:DP        0|0:81:27       1|1:25:11       0|1:100:40
+3      17475623        rs11922536      A       G       .       PASS    AA=a;DP=134     GT:GQ:DP        0|0:81:27       1|1:25:21       0|1:100:68
+1      162762893       rs59812991      T       C       .       PASS    AA=T;DP=81      GT:GQ:DP        0|0:81:27       1|1:28:11       0|1:100:43
+12     29738200        rs11050383      T       C       .       PASS    AA=T;DP=76      GT:GQ:DP        0|0:81:27       1|1:31:13       0|1:100:31
+2      139200906       rs4128393       A       G       .       PASS    AA=G;DP=111     GT:GQ:DP        0|0:81:27       1|1:31:23       0|1:100:63
+5      108315911       rs3797820       T       C       .       PASS    AA=T;DP=116     GT:GQ:DP        0|0:81:27       1|1:31:27       0|1:100:60
+13     91237073        rs560244        T       G       .       PASS    AA=G;DP=99      GT:GQ:DP        0|0:81:27       1|1:32:22       0|1:100:53
+4      85047008        rs4518238       C       A       .       PASS    AA=A;DP=90      GT:GQ:DP        0|0:81:27       1|1:34:14       0|1:100:39
+12     130271832       rs57150054      C       T       .       PASS    AA=C;DP=95      GT:GQ:DP        0|0:81:27       1|1:34:14       0|1:100:55
+12     2589558 rs215996        G       C       .       PASS    AA=G;DP=134     GT:GQ:DP        0|0:81:27       1|1:35:18       0|1:100:48
+13     48113094        rs59355608      C       G       .       PASS    AA=C;DP=130     GT:GQ:DP        0|0:81:27       1|1:39:26       0|1:100:64
+7      150211826       rs6965567       G       A       .       PASS    AA=G;DP=98      GT:GQ:DP        0|0:81:27       1|1:40:16       0|1:100:40
+22     36860698        rs10483197      G       T       .       PASS    AA=T;DP=141     GT:GQ:DP        0|0:81:27       1|1:43:17       0|1:100:43
+13     107525422       .       A       G       .       PASS    AA=A;DP=94      GT:GQ:DP        0|0:81:27       1|1:43:17       0|1:100:48
+4      134706740       rs9996652       G       C       .       PASS    AA=C;DP=102     GT:GQ:DP        0|0:81:27       1|1:43:17       0|1:100:61
+7      55208602        rs17290329      G       C       .       PASS    AA=G;DP=108     GT:GQ:DP        0|0:81:27       1|1:43:17       0|1:100:65
+14     48739383        .       A       T       .       PASS    AA=A;DP=106     GT:GQ:DP        0|0:81:27       1|1:45:24       0|1:100:54
+6      121605981       .       G       C       .       PASS    AA=G;DP=108     GT:GQ:DP        0|0:81:27       1|1:46:17       0|1:100:63
+17     29240126        rs8069604       C       T       .       PASS    AA=T;DP=109     GT:GQ:DP        0|0:81:27       1|1:46:17       0|1:100:64
+6      44843263        rs4714819       G       C       .       PASS    AA=C;DP=101     GT:GQ:DP        0|0:81:27       1|1:46:18       0|1:100:56
+3      69706087        rs288509        G       A       .       PASS    AA=N;DP=101     GT:GQ:DP        0|0:81:27       1|1:46:18       0|1:100:57
+2      7104650 rs6722170       A       G       .       PASS    AA=A;DP=113     GT:GQ:DP        0|0:81:27       1|1:46:18       0|1:100:69
+7      153767488       rs6965651       T       G       .       PASS    AA=T;DP=124     GT:GQ:DP        0|0:81:27       1|1:49:18       0|1:100:79
+4      111919134       .       A       T       .       PASS    AA=A;DP=127     GT:GQ:DP        0|0:81:27       1|1:49:27       0|1:100:75
+2      221078739       .       T       C       .       PASS    AA=N;DP=114     GT:GQ:DP        0|0:81:27       1|1:50:24       0|1:100:64
+5      169760135       rs1972058       C       T       .       PASS    AA=C;DP=117     GT:GQ:DP        0|0:81:27       1|1:52:19       0|1:100:70
+6      20306824        rs943573        G       A       .       PASS    AA=A;DP=133     GT:GQ:DP        0|0:81:27       1|1:54:28       0|1:100:82
+10     108051519       .       A       G       .       PASS    AA=A;DP=108     GT:GQ:DP        0|0:81:27       1|1:55:21       0|1:100:61
+4      28179360        .       C       G       .       PASS    AA=C;DP=98      GT:GQ:DP        0|0:81:27       1|1:58:21       0|1:100:50
+7      149639263       rs10237116      G       T       .       PASS    AA=t;DP=126     GT:GQ:DP        0|0:81:27       1|1:58:21       0|1:100:79
+1      165360278       rs7539374       A       T       .       PASS    AA=T;DP=128     GT:GQ:DP        0|0:81:27       1|1:58:21       0|1:100:80
+4      164521670       rs13140716      G       A       .       PASS    AA=G;DP=128     GT:GQ:DP        0|0:81:27       1|1:58:22       0|1:100:38
+9      9431513 rs59714119      T       C       .       PASS    AA=T;DP=122     GT:GQ:DP        0|0:81:27       1|1:58:22       0|1:100:72
+1      210122947       rs59499736      G       C       .       PASS    AA=G;DP=126     GT:GQ:DP        0|0:81:27       1|1:61:22       0|1:100:77
+4      182368100       rs2034773       A       C       .       PASS    AA=A;DP=110     GT:GQ:DP        0|0:81:27       1|1:61:23       0|1:100:60
+8      42583391        rs13264222      C       T       .       PASS    AA=C;DP=104     GT:GQ:DP        0|0:81:27       1|1:61:24       0|1:100:52
+17     29212853        rs1490898       T       C       .       PASS    AA=C;DP=134     GT:GQ:DP        0|0:81:27       1|1:61:29       0|1:100:38
+10     29143785        rs17542101      T       G       .       PASS    AA=T;DP=121     GT:GQ:DP        0|0:81:27       1|1:64:23       0|1:100:72
+17     66217618        rs10512541      G       A       .       PASS    AA=A;DP=115     GT:GQ:DP        0|0:81:27       1|1:67:24       0|1:100:65
+12     18930860        rs1490730       C       G       .       PASS    AA=C;DP=130     GT:GQ:DP        0|0:81:27       1|1:67:24       0|1:100:78
+3      4953187 rs6766565       T       C       .       PASS    AA=T;DP=138     GT:GQ:DP        0|0:81:27       1|1:70:25       0|1:100:43
+9      34766789        rs277598        T       C       .       PASS    AA=t;DP=111     GT:GQ:DP        0|0:81:27       1|1:70:32       0|1:100:52
+14     96649955        .       T       C       .       PASS    AA=T;DP=109     GT:GQ:DP        0|0:81:27       1|1:73:26       0|1:100:58
+16     63018894        rs11859443      C       A       .       PASS    AA=c;DP=118     GT:GQ:DP        0|0:81:27       1|1:73:26       0|1:100:65
+14     64844230        rs17102587      T       C       .       PASS    AA=C;DP=135     GT:GQ:DP        0|0:81:27       1|1:73:27       0|1:100:83
+3      166039674       rs9878947       C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        0|0:81:27       1|1:76:27       0|1:100:58
+6      91940050        rs12204822      A       G       .       PASS    AA=A;DP=120     GT:GQ:DP        0|0:81:27       1|1:79:28       0|1:100:64
+2      103140257       rs4319952       C       T       .       PASS    AA=T;DP=122     GT:GQ:DP        0|0:81:27       1|1:79:28       0|1:100:67
+12     91544544        rs11106651      T       C       .       PASS    AA=T;DP=125     GT:GQ:DP        0|0:81:27       1|1:82:30       0|1:100:69
+22     20514133        rs9607298       G       C       .       PASS    AA=C;DP=154     GT:GQ:DP        0|0:81:27       1|1:97:36       0|1:100:41
+20     58508351        rs348761        G       A       .       PASS    AA=G;DP=120     GT:GQ:DP        0|0:81:28       0|1:100:30      0|0:100:63
+14     24965657        rs2754102       T       C       .       PASS    AA=T;DP=98      GT:GQ:DP        0|0:81:28       1|1:13:13       0|1:100:60
+5      109429105       .       C       G       .       PASS    AA=C;DP=120     GT:GQ:DP        0|0:81:28       1|1:16:16       0|1:100:77
+12     59740534        rs12317726      G       A       .       PASS    AA=A;DP=101     GT:GQ:DP        0|0:81:28       1|1:25:10       0|1:100:62
+8      111908939       rs62522368      T       C       .       PASS    AA=C;DP=121     GT:GQ:DP        0|0:81:28       1|1:34:14       0|1:100:78
+6      160195397       rs9365102       G       A       .       PASS    AA=G;DP=94      GT:GQ:DP        0|0:81:28       1|1:37:14       0|1:100:54
+18     38337851        rs16976254      G       A       .       PASS    AA=G;DP=119     GT:GQ:DP        0|0:81:28       1|1:40:15       0|1:100:36
+12     20514318        rs4762963       T       C       .       PASS    AA=C;DP=115     GT:GQ:DP        0|0:81:28       1|1:40:15       0|1:100:73
+7      26630017        rs6967151       A       G       .       PASS    AA=G;DP=123     GT:GQ:DP        0|0:81:28       1|1:40:15       0|1:100:78
+1      58524717        rs12072207      C       T       .       PASS    AA=C;DP=86      GT:GQ:DP        0|0:81:28       1|1:40:21       0|1:100:27
+4      57896314        rs2691387       A       G       .       PASS    AA=G;DP=125     GT:GQ:DP        0|0:81:28       1|1:47:27       0|1:100:70
+10     47999104        .       C       A       .       PASS    AA=C;DP=139     GT:GQ:DP        0|0:81:28       1|1:49:18       0|1:100:93
+5      141198400       rs415556        A       G       .       PASS    AA=G;DP=116     GT:GQ:DP        0|0:81:28       1|1:52:19       0|1:100:72
+13     32348065        .       A       G       .       PASS    AA=A;DP=127     GT:GQ:DP        0|0:81:28       1|1:52:20       0|1:100:81
+1      183953636       rs16824396      G       A       .       PASS    AA=A;DP=110;HM2 GT:GQ:DP        0|0:81:28       1|1:55:20       0|1:100:65
+8      54343678        rs2098884       A       G       .       PASS    AA=G;DP=152     GT:GQ:DP        0|0:81:28       1|1:64:23       0|1:100:48
+7      155200880       .       A       G       .       PASS    AA=A;DP=126     GT:GQ:DP        0|0:81:28       1|1:64:23       0|1:100:75
+1      238136810       rs6701181       C       T       .       PASS    AA=T;DP=121;HM2;HM3     GT:GQ:DP        0|0:81:28       1|1:70:25       0|1:100:70
+19     23808033        rs1035523       C       A       .       PASS    AA=c;DP=123     GT:GQ:DP        0|0:81:28       1|1:71:37       0|1:100:58
+2      146203610       rs7570467       A       G       .       PASS    AA=A;DP=113     GT:GQ:DP        0|0:81:28       1|1:73:26       0|1:100:57
+6      160932739       rs9457946       C       T       .       PASS    AA=.;DP=134     GT:GQ:DP        0|0:81:28       1|1:82:30       0|1:100:77
+16     523459  rs3826233       G       A       .       PASS    AA=A;DP=84      GT:GQ:DP        0|0:81:29       1|1:19:9        0|1:100:42
+8      19576375        rs11785951      C       G       .       PASS    AA=C;DP=87      GT:GQ:DP        0|0:81:29       1|1:22:9        0|1:100:49
+2      19852358        rs10201889      A       G       .       PASS    AA=A;DP=109     GT:GQ:DP        0|0:81:29       1|1:31:12       0|1:100:70
+2      160430761       rs2667029       C       T       .       PASS    AA=C;DP=121     GT:GQ:DP        0|0:81:29       1|1:48:24       0|1:100:62
+4      1615925 rs28529337      C       T       .       PASS    AA=c;DP=115     GT:GQ:DP        0|0:81:29       1|1:5:9 0|1:100:74
+2      217926891       rs6761655       A       G       .       PASS    AA=G;DP=139     GT:GQ:DP        0|0:81:29       1|1:67:24       0|1:100:43
+3      147961668       rs1003263       A       G       .       PASS    AA=G;DP=111     GT:GQ:DP        0|0:81:29       1|1:73:26       0|1:100:59
+7      97177233        rs2221754       C       A       .       PASS    AA=C;DP=116     GT:GQ:DP        0|0:81:29       1|1:85:30       0|1:100:53
+1      53560221        rs1288520       G       A       .       PASS    AA=G;DP=134;HM2;HM3     GT:GQ:DP        0|0:81:30       1|1:11:5        0|1:100:57
+17     32302207        rs12951134      A       C       .       PASS    AA=A;DP=118     GT:GQ:DP        0|0:81:30       1|1:14:17       0|1:100:71
+11     96413468        rs10895064      A       T       .       PASS    AA=t;DP=132     GT:GQ:DP        0|0:81:31       0|1:100:24      0|0:100:78
+11     54729781        .       T       C       .       PASS    AA=.;DP=122     GT:GQ:DP        0|0:81:31       0|1:100:31      0|0:100:60
+21     23653715        rs7275249       A       T       .       PASS    AA=A;DP=115     GT:GQ:DP        0|0:81:31       1|0:100:16      0|1:100:70
+5      12236899        .       C       A       .       PASS    AA=T;DP=112     GT:GQ:DP        0|0:81:31       1|0:100:28      0|1:100:53
+1      878102  rs58215279      C       T       .       PASS    AA=C;DP=114     GT:GQ:DP        0|0:81:31       1|1:28:12       0|1:100:70
+20     17864715        rs60358814      G       A       .       PASS    AA=G;DP=123     GT:GQ:DP        0|0:81:32       1|0:100:20      0|1:100:72
+22     34026077        rs138728        G       C       .       PASS    AA=c;DP=103     GT:GQ:DP        0|0:81:32       1|0:83:13       0|1:100:58
+2      25405232        .       T       G       .       PASS    AA=N;DP=106     GT:GQ:DP        0|0:81:33       0|1:100:11      0|0:100:63
+8      124951950       rs1816368       A       C       .       PASS    AA=A;DP=130     GT:GQ:DP        0|0:81:33       0|1:100:25      0|0:100:75
+8      53410973        rs13258413      A       G       .       PASS    AA=A;DP=135     GT:GQ:DP        0|0:81:33       1|0:100:26      0|1:100:75
+15     67536647        rs57759502      C       T       .       PASS    AA=C;DP=126     GT:GQ:DP        0|0:81:33       1|0:100:28      0|1:100:66
+14     69853475        rs8020966       C       T       .       PASS    AA=C;DP=129     GT:GQ:DP        0|0:81:33       1|1:12:23       0|1:100:73
+2      68906619        rs41285953      G       T       .       PASS    AA=G;DP=129     GT:GQ:DP        0|0:81:34       0|1:100:18      0|0:100:76
+8      105718812       .       G       T       .       PASS    AA=T;DP=110     GT:GQ:DP        0|0:81:34       1|0:100:14      0|1:100:61
+4      36450634        .       G       T       .       PASS    AA=G;DP=133     GT:GQ:DP        0|0:81:34       1|0:100:18      0|1:100:81
+7      50156924        rs878687        G       A       .       PASS    AA=C;DP=137     GT:GQ:DP        0|0:81:34       1|0:56:20       0|1:100:40
+7      117630587       .       C       G       .       PASS    AA=C;DP=102     GT:GQ:DP        0|0:81:35       0|1:100:12      0|0:100:53
+3      3677185 rs9875879       T       C       .       PASS    AA=T;DP=87      GT:GQ:DP        0|0:81:35       0|1:100:13      0|0:99:33
+13     107172153       rs7139609       C       T       .       PASS    AA=T;DP=115     GT:GQ:DP        0|0:81:37       0|1:100:18      0|0:100:62
+15     72685820        .       G       C       .       PASS    AA=G;DP=122     GT:GQ:DP        0|0:81:37       0|1:100:20      0|0:100:51
+13     98798135        rs9513601       G       A       .       PASS    AA=G;DP=144     GT:GQ:DP        0|0:81:37       0|1:100:26      0|0:100:81
+8      74703375        .       G       C       .       PASS    AA=G;DP=146     GT:GQ:DP        0|0:81:37       0|1:100:31      0|0:99:34
+10     4072760 rs11252292      C       T       .       PASS    AA=C;DP=162     GT:GQ:DP        0|0:81:37       0|1:100:36      0|0:100:91
+4      80034283        rs62307964      G       A       .       PASS    AA=G;DP=133     GT:GQ:DP        0|0:81:38       0|1:100:13      0|0:100:84
+9      31391762        .       T       C       .       PASS    AA=T;DP=155     GT:GQ:DP        0|0:81:38       0|1:100:36      0|0:100:84
+18     67236983        rs629331        G       T       .       PASS    AA=G;DP=106     GT:GQ:DP        0|0:81:38       1|0:100:18      0|1:100:50
+6      56351040        .       G       A       .       PASS    AA=G;DP=124     GT:GQ:DP        0|0:81:38       1|0:100:23      0|1:100:41
+7      87892867        rs11972558      T       G       .       PASS    AA=T;DP=119     GT:GQ:DP        0|0:81:38       1|0:100:23      0|1:100:59
+2      143606219       rs354714        A       T       .       PASS    AA=A;DP=131     GT:GQ:DP        0|0:81:38       1|0:100:25      0|1:100:68
+2      75219905        .       G       A       .       PASS    AA=G;DP=140     GT:GQ:DP        0|0:81:38       1|0:100:28      0|1:100:71
+7      18861852        .       G       T       .       PASS    AA=G;DP=149     GT:GQ:DP        0|0:81:38       1|0:100:30      0|1:100:82
+11     105647239       .       G       T       .       PASS    AA=G;DP=151     GT:GQ:DP        0|0:81:38       1|0:100:35      0|1:100:80
+11     116806012       .       C       T       .       PASS    AA=c;DP=130     GT:GQ:DP        0|0:81:38       1|0:64:13       0|1:100:79
+1      55534849        rs11206555      A       G       .       PASS    AA=G;DP=82      GT:GQ:DP        0|0:81:38       1|1:19:8        0|1:67:37
+12     105819971       rs10492213      T       A       .       PASS    AA=T;DP=156     GT:GQ:DP        0|0:81:39       1|1:33:24       0|1:100:92
+7      31796620        rs982857        A       G       .       PASS    AA=A;DP=128     GT:GQ:DP        0|0:81:39       1|1:61:22       0|1:100:68
+1      33317510        rs60527727      A       G       .       PASS    AA=A;DP=133     GT:GQ:DP        0|0:81:39       1|1:73:27       0|1:100:70
+6      20741125        .       A       G       .       PASS    AA=a;DP=130     GT:GQ:DP        0|0:81:40       0|1:100:24      0|0:100:66
+11     90820987        .       A       G       .       PASS    AA=G;DP=101     GT:GQ:DP        0|0:82:27       0|1:100:21      0|0:100:55
+14     29408548        rs7155170       T       A       .       PASS    AA=T;DP=122     GT:GQ:DP        0|0:82:28       1|0:100:23      0|1:100:71
+16     22185780        rs8057963       T       C       .       PASS    AA=C;DP=131     GT:GQ:DP        0|0:82:28       1|0:91:21       0|1:100:83
+10     106264364       rs4917415       T       C       .       PASS    AA=T;DP=155     GT:GQ:DP        0|0:82:29       1|0:100:23      0|1:100:47
+19     49795070        rs707754        C       G       .       PASS    AA=c;DP=122     GT:GQ:DP        0|0:82:30       0|1:100:12      0|0:100:78
+15     38354659        rs4924443       T       C       .       PASS    AA=C;DP=119     GT:GQ:DP        0|0:82:30       0|1:100:18      0|0:100:71
+1      221969596       rs28370012      A       C       .       PASS    AA=A;DP=142     GT:GQ:DP        0|0:82:30       0|1:100:28      0|0:100:44
+5      121927601       .       A       C       .       PASS    AA=A;DP=96      GT:GQ:DP        0|0:82:30       1|1:58:21       0|1:100:45
+4      81816474        .       G       A       .       PASS    AA=G;DP=109     GT:GQ:DP        0|0:82:31       0|1:100:22      0|0:100:55
+18     33469102        .       C       T       .       PASS    AA=C;DP=140     GT:GQ:DP        0|0:82:31       0|1:100:24      0|0:100:87
+8      129560334       rs11984978      A       C       .       PASS    AA=C;DP=132     GT:GQ:DP        0|0:82:33       0|1:100:35      0|0:100:67
+12     41545778        rs57471025      T       C       .       PASS    AA=C;DP=122     GT:GQ:DP        0|0:82:33       1|0:100:25      0|1:100:62
+2      234514407       .       A       C       .       PASS    AA=A;DP=118     GT:GQ:DP        0|0:82:34       0|1:100:22      0|0:100:63
+8      996720  rs2123060       T       C       .       PASS    AA=t;DP=113     GT:GQ:DP        0|0:82:34       1|0:100:18      0|1:100:60
+14     61069240        rs7157798       G       A       .       PASS    AA=G;DP=115     GT:GQ:DP        0|0:82:34       1|0:89:16       0|1:100:67
+1      170995299       rs704846        A       T       .       PASS    AA=A;DP=139     GT:GQ:DP        0|0:82:35       0|1:100:29      0|0:100:75
+18     56027126        .       T       C       .       PASS    AA=T;DP=149     GT:GQ:DP        0|0:82:35       1|0:100:34      0|1:100:80
+7      154597773       rs10249980      G       A       .       PASS    AA=g;DP=114     GT:GQ:DP        0|0:82:35       1|1:20:14       0|1:100:45
+2      15708147        rs807609        T       C       .       PASS    AA=N;DP=136     GT:GQ:DP        0|0:82:36       0|1:100:23      0|0:100:79
+3      127868082       rs1002614       A       G       .       PASS    AA=a;DP=150     GT:GQ:DP        0|0:82:36       1|1:52:21       0|1:100:48
+9      2156299 .       T       G       .       PASS    AA=T;DP=139     GT:GQ:DP        0|0:82:38       1|0:100:38      0|1:100:64
+18     6684912 .       G       A       .       PASS    AA=G;DP=118     GT:GQ:DP        0|0:83:26       0|1:100:12      0|0:100:35
+15     27168969        .       C       T       .       PASS    AA=C;DP=103     GT:GQ:DP        0|0:83:26       0|1:100:12      0|0:100:61
+1      57336463        .       A       G       .       PASS    AA=A;DP=91      GT:GQ:DP        0|0:83:26       0|1:100:13      0|0:100:49
+4      137745758       .       G       A       .       PASS    AA=G;DP=100     GT:GQ:DP        0|0:83:26       0|1:100:13      0|0:100:62
+19     46376665        rs10164272      C       T       .       PASS    AA=C;DP=96      GT:GQ:DP        0|0:83:26       0|1:100:14      0|0:100:58
+10     879320  rs12244253      G       T       .       PASS    AA=T;DP=101     GT:GQ:DP        0|0:83:26       0|1:100:14      0|0:100:62
+7      141343160       .       G       C       .       PASS    AA=G;DP=123     GT:GQ:DP        0|0:83:26       0|1:100:14      0|0:100:63
+10     73497106        .       G       T       .       PASS    AA=T;DP=116     GT:GQ:DP        0|0:83:26       0|1:100:14      0|0:100:77
+1      182700609       .       C       T       .       PASS    AA=C;DP=117     GT:GQ:DP        0|0:83:26       0|1:100:14      0|0:100:78
+7      84498545        .       T       C       .       PASS    AA=T;DP=81      GT:GQ:DP        0|0:83:26       0|1:100:15      0|0:100:40
+16     81024173        rs12921490      G       A       .       PASS    AA=G;DP=82      GT:GQ:DP        0|0:83:26       0|1:100:16      0|0:100:40
+4      122815084       rs4240260       A       G       .       PASS    AA=G;DP=141     GT:GQ:DP        0|0:83:26       0|1:100:16      0|0:100:43
+2      209524901       rs10186204      A       G       .       PASS    AA=A;DP=86      GT:GQ:DP        0|0:83:26       0|1:100:16      0|0:100:45
+3      176477892       rs9867950       T       G       .       PASS    AA=T;DP=106     GT:GQ:DP        0|0:83:26       0|1:100:16      0|0:100:60
+4      45506359        .       G       T       .       PASS    AA=g;DP=108     GT:GQ:DP        0|0:83:26       0|1:100:16      0|0:100:66
+20     10744171        .       A       G       .       PASS    AA=A;DP=116     GT:GQ:DP        0|0:83:26       0|1:100:16      0|0:100:75
+14     97333649        rs898923        C       T       .       PASS    AA=C;DP=119     GT:GQ:DP        0|0:83:26       0|1:100:16      0|0:100:79
+14     23999555        .       G       A       .       PASS    AA=G;DP=130     GT:GQ:DP        0|0:83:26       0|1:100:17      0|0:100:47
+4      121441180       .       A       G       .       PASS    AA=A;DP=95      GT:GQ:DP        0|0:83:26       0|1:100:17      0|0:100:53
+5      116206391       .       T       C       .       PASS    AA=T;DP=109     GT:GQ:DP        0|0:83:26       0|1:100:17      0|0:100:66
+15     52267670        .       C       T       .       PASS    AA=T;DP=110     GT:GQ:DP        0|0:83:26       0|1:100:17      0|0:100:67
+9      37401281        .       G       A       .       PASS    AA=G;DP=118     GT:GQ:DP        0|0:83:26       0|1:100:17      0|0:100:77
+10     115554720       .       T       A       .       PASS    AA=T;DP=118     GT:GQ:DP        0|0:83:26       0|1:100:17      0|0:96:32
+1      43430345        rs61776951      G       C       .       PASS    AA=G;DP=93      GT:GQ:DP        0|0:83:26       0|1:100:18      0|0:100:49
+12     23335885        rs4573738       C       T       .       PASS    AA=C;DP=99      GT:GQ:DP        0|0:83:26       0|1:100:18      0|0:100:54
+2      82172910        rs62150730      T       C       .       PASS    AA=T;DP=124     GT:GQ:DP        0|0:83:26       0|1:100:18      0|0:100:61
+1      199979835       rs12081246      A       G       .       PASS    AA=A;DP=108     GT:GQ:DP        0|0:83:26       0|1:100:18      0|0:100:64
+3      96588765        .       T       C       .       PASS    AA=T;DP=111     GT:GQ:DP        0|0:83:26       0|1:100:18      0|0:100:69
+15     91635952        rs8027696       G       C       .       PASS    AA=C;DP=120     GT:GQ:DP        0|0:83:26       0|1:100:18      0|0:100:76
+16     79699859        rs4520846       C       A       .       PASS    AA=C;DP=124     GT:GQ:DP        0|0:83:26       0|1:100:18      0|0:100:81
+15     45780666        .       A       G       .       PASS    AA=A;DP=96      GT:GQ:DP        0|0:83:26       0|1:100:19      0|0:100:38
+5      139480020       rs10050453      G       T       .       PASS    AA=G;DP=97      GT:GQ:DP        0|0:83:26       0|1:100:19      0|0:100:38
+12     114162478       rs58169768      T       A       .       PASS    AA=T;DP=132     GT:GQ:DP        0|0:83:26       0|1:100:19      0|0:100:49
+5      169281884       .       C       G       .       PASS    AA=C;DP=97      GT:GQ:DP        0|0:83:26       0|1:100:19      0|0:100:50
+8      5797420 rs59858530      T       G       .       PASS    AA=T;DP=96      GT:GQ:DP        0|0:83:26       0|1:100:19      0|0:100:52
+6      20057260        rs1931798       A       T       .       PASS    AA=A;DP=103     GT:GQ:DP        0|0:83:26       0|1:100:19      0|0:100:58
+5      53336369        rs4334835       T       G       .       PASS    AA=T;DP=114     GT:GQ:DP        0|0:83:26       0|1:100:19      0|0:100:71
+4      99478240        .       A       G       .       PASS    AA=A;DP=124     GT:GQ:DP        0|0:83:26       0|1:100:19      0|0:100:81
+15     62779942        .       G       C       .       PASS    AA=g;DP=138     GT:GQ:DP        0|0:83:26       0|1:100:19      0|0:100:92
+12     40282422        rs1390373       C       T       .       PASS    AA=T;DP=119     GT:GQ:DP        0|0:83:26       0|1:100:19      0|0:90:30
+1      197854493       rs16845219      C       A       .       PASS    AA=A;DP=90      GT:GQ:DP        0|0:83:26       0|1:100:20      0|0:100:43
+10     69338246        rs34264517      A       G       .       PASS    AA=A;DP=98      GT:GQ:DP        0|0:83:26       0|1:100:20      0|0:100:51
+6      73346296        rs1147557       G       T       .       PASS    AA=T;DP=98      GT:GQ:DP        0|0:83:26       0|1:100:20      0|0:100:51
+1      196971724       rs13376111      T       G       .       PASS    AA=T;DP=99;HM2  GT:GQ:DP        0|0:83:26       0|1:100:20      0|0:100:55
+9      23284730        rs10125649      G       A       .       PASS    AA=a;DP=111     GT:GQ:DP        0|0:83:26       0|1:100:20      0|0:100:66
+4      43000322        rs17595974      T       C       .       PASS    AA=T;DP=110     GT:GQ:DP        0|0:83:26       0|1:100:20      0|0:100:67
+16     12920437        .       A       G       .       PASS    AA=A;DP=114     GT:GQ:DP        0|0:83:26       0|1:100:20      0|0:100:69
+2      16296349        rs55982637      C       G       .       PASS    AA=C;DP=117     GT:GQ:DP        0|0:83:26       0|1:100:20      0|0:100:70
+8      85987536        rs16913450      T       G       .       PASS    AA=t;DP=134     GT:GQ:DP        0|0:83:26       0|1:100:20      0|0:100:90
+18     61838734        rs2541747       C       T       .       PASS    AA=C;DP=116     GT:GQ:DP        0|0:83:26       0|1:100:20      0|0:93:31
+2      153207914       .       G       A       .       PASS    AA=G;DP=133     GT:GQ:DP        0|0:83:26       0|1:100:21      0|0:100:46
+6      168382131       rs9355187       A       C       .       PASS    AA=a;DP=100     GT:GQ:DP        0|0:83:26       0|1:100:21      0|0:100:53
+1      82905415        rs9659589       A       C       .       PASS    AA=A;DP=101     GT:GQ:DP        0|0:83:26       0|1:100:21      0|0:100:55
+11     6898193 rs12293017      G       A       .       PASS    AA=G;DP=102     GT:GQ:DP        0|0:83:26       0|1:100:21      0|0:100:56
+21     40401193        .       G       A       .       PASS    AA=G;DP=108     GT:GQ:DP        0|0:83:26       0|1:100:21      0|0:100:60
+7      55006921        rs10225235      T       C       .       PASS    AA=T;DP=112     GT:GQ:DP        0|0:83:26       0|1:100:21      0|0:100:66
+3      189507512       .       T       G       .       PASS    AA=T;DP=118     GT:GQ:DP        0|0:83:26       0|1:100:21      0|0:100:68
+4      138574294       rs6842609       T       A       .       PASS    AA=T;DP=117     GT:GQ:DP        0|0:83:26       0|1:100:21      0|0:100:71
+8      54480183        rs2126802       A       C       .       PASS    AA=C;DP=121     GT:GQ:DP        0|0:83:26       0|1:100:21      0|0:100:72
+2      190353396       .       T       C       .       PASS    AA=T;DP=119     GT:GQ:DP        0|0:83:26       0|1:100:21      0|0:100:74
+1      225219865       .       G       A       .       PASS    AA=G;DP=122     GT:GQ:DP        0|0:83:26       0|1:100:21      0|0:100:77
+13     26012076        rs9512256       G       A       .       PASS    AA=A;DP=123     GT:GQ:DP        0|0:83:26       0|1:100:21      0|0:100:79
+5      77862102        rs17215893      G       A       .       PASS    AA=g;DP=128     GT:GQ:DP        0|0:83:26       0|1:100:21      0|0:100:83
+5      135158788       rs11745326      C       T       .       PASS    AA=N;DP=108     GT:GQ:DP        0|0:83:26       0|1:100:22      0|0:100:62
+16     23985748        rs7205305       T       C       .       PASS    AA=T;DP=113     GT:GQ:DP        0|0:83:26       0|1:100:22      0|0:100:65
+1      172974830       rs333436        G       T       .       PASS    AA=T;DP=115;HM2;HM3     GT:GQ:DP        0|0:83:26       0|1:100:22      0|0:100:67
+22     26779486        rs16985919      C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        0|0:83:26       0|1:100:22      0|0:100:70
+5      35732649        rs7724870       A       G       .       PASS    AA=G;DP=118     GT:GQ:DP        0|0:83:26       0|1:100:22      0|0:100:75
+10     85654889        rs4933942       C       T       .       PASS    AA=T;DP=128     GT:GQ:DP        0|0:83:26       0|1:100:22      0|0:100:81
+2      45954364        .       C       A       .       PASS    AA=C;DP=143     GT:GQ:DP        0|0:83:26       0|1:100:22      0|0:100:98
+11     98269292        rs56292211      G       A       .       PASS    AA=G;DP=112     GT:GQ:DP        0|0:83:26       0|1:100:22      0|0:75:26
+6      35917754        rs17705020      C       T       .       PASS    AA=C;DP=119     GT:GQ:DP        0|0:83:26       0|1:100:22      0|0:84:28
+14     88809682        .       C       T       .       PASS    AA=C;DP=129     GT:GQ:DP        0|0:83:26       0|1:100:23      0|0:100:39
+12     77935710        rs7963579       C       T       .       PASS    AA=c;DP=133     GT:GQ:DP        0|0:83:26       0|1:100:23      0|0:100:41
+3      40253733        .       T       C       .       PASS    AA=.;DP=135     GT:GQ:DP        0|0:83:26       0|1:100:23      0|0:100:44
+11     75779777        rs4945078       G       C       .       PASS    AA=G;DP=132     GT:GQ:DP        0|0:83:26       0|1:100:23      0|0:100:45
+4      148237115       rs11941436      A       G       .       PASS    AA=G;DP=111     GT:GQ:DP        0|0:83:26       0|1:100:23      0|0:100:64
+5      180171972       rs610847        A       G       .       PASS    AA=A;DP=117     GT:GQ:DP        0|0:83:26       0|1:100:23      0|0:100:65
+3      116428012       rs59774725      G       A       .       PASS    AA=G;DP=116     GT:GQ:DP        0|0:83:26       0|1:100:23      0|0:100:66
+4      158225326       rs7667450       G       A       .       PASS    AA=G;DP=119     GT:GQ:DP        0|0:83:26       0|1:100:23      0|0:100:67
+2      101452432       .       G       A       .       PASS    AA=g;DP=117     GT:GQ:DP        0|0:83:26       0|1:100:23      0|0:100:68
+4      118725085       rs13129382      C       T       .       PASS    AA=C;DP=124     GT:GQ:DP        0|0:83:26       0|1:100:23      0|0:100:76
+7      17385182        .       C       T       .       PASS    AA=C;DP=126     GT:GQ:DP        0|0:83:26       0|1:100:23      0|0:100:77
+3      23755388        rs4858086       G       A       .       PASS    AA=G;DP=136     GT:GQ:DP        0|0:83:26       0|1:100:24      0|0:100:41
+4      35680884        .       A       C       .       PASS    AA=A;DP=138     GT:GQ:DP        0|0:83:26       0|1:100:24      0|0:100:43
+10     55849250        rs11004292      T       C       .       PASS    AA=T;DP=100     GT:GQ:DP        0|0:83:26       0|1:100:24      0|0:100:47
+4      170853290       rs28776819      T       C       .       PASS    AA=T;DP=99      GT:GQ:DP        0|0:83:26       0|1:100:24      0|0:100:48
+3      119717921       .       T       C       .       PASS    AA=t;DP=103     GT:GQ:DP        0|0:83:26       0|1:100:24      0|0:100:52
+14     35020614        rs11156885      G       A       .       PASS    AA=G;DP=105     GT:GQ:DP        0|0:83:26       0|1:100:24      0|0:100:56
+10     54014294        rs1919763       G       T       .       PASS    AA=T;DP=108     GT:GQ:DP        0|0:83:26       0|1:100:24      0|0:100:59
+14     72198873        rs11463 C       A       .       PASS    AA=A;DP=118     GT:GQ:DP        0|0:83:26       0|1:100:24      0|0:100:63
+11     76602951        .       G       A       .       PASS    AA=G;DP=115     GT:GQ:DP        0|0:83:26       0|1:100:24      0|0:100:68
+12     18839586        rs7967863       G       A       .       PASS    AA=G;DP=119     GT:GQ:DP        0|0:83:26       0|1:100:24      0|0:100:71
+21     27593172        rs13052868      T       C       .       PASS    AA=T;DP=120     GT:GQ:DP        0|0:83:26       0|1:100:24      0|0:100:73
+10     29239972        rs11596869      T       C       .       PASS    AA=T;DP=125     GT:GQ:DP        0|0:83:26       0|1:100:24      0|0:100:74
+8      10418538        rs4531010       G       T       .       PASS    AA=T;DP=141     GT:GQ:DP        0|0:83:26       0|1:100:25      0|0:100:38
+4      181427523       rs11937508      A       G       .       PASS    AA=A;DP=102     GT:GQ:DP        0|0:83:26       0|1:100:25      0|0:100:51
+3      126584765       .       G       A       .       PASS    AA=G;DP=109     GT:GQ:DP        0|0:83:26       0|1:100:25      0|0:100:56
+3      112460203       .       G       T       .       PASS    AA=G;DP=111     GT:GQ:DP        0|0:83:26       0|1:100:25      0|0:100:60
+3      183552949       rs6793645       C       T       .       PASS    AA=C;DP=113     GT:GQ:DP        0|0:83:26       0|1:100:25      0|0:100:63
+4      135812045       .       G       A       .       PASS    AA=G;DP=116     GT:GQ:DP        0|0:83:26       0|1:100:25      0|0:100:63
+6      101110739       .       C       T       .       PASS    AA=C;DP=114     GT:GQ:DP        0|0:83:26       0|1:100:26      0|0:100:61
+5      115564151       .       C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        0|0:83:26       0|1:100:26      0|0:100:63
+12     17269406        .       C       T       .       PASS    AA=C;DP=118     GT:GQ:DP        0|0:83:26       0|1:100:26      0|0:100:65
+4      190198207       rs4333233       G       A       .       PASS    AA=G;DP=129     GT:GQ:DP        0|0:83:26       0|1:100:26      0|0:100:78
+13     109893378       rs7991974       G       A       .       PASS    AA=G;DP=133     GT:GQ:DP        0|0:83:26       0|1:100:26      0|0:100:84
+11     14120809        rs11023107      A       G       .       PASS    AA=G;DP=152     GT:GQ:DP        0|0:83:26       0|1:100:27      0|0:100:55
+4      27026173        rs10008712      G       A       .       PASS    AA=G;DP=124     GT:GQ:DP        0|0:83:26       0|1:100:27      0|0:100:72
+2      51423253        rs60326347      T       C       .       PASS    AA=T;DP=129     GT:GQ:DP        0|0:83:26       0|1:100:27      0|0:100:73
+14     27882261        .       C       T       .       PASS    AA=C;DP=125     GT:GQ:DP        0|0:83:26       0|1:100:27      0|0:100:74
+11     115620265       rs2367633       G       C       .       PASS    AA=G;DP=128     GT:GQ:DP        0|0:83:26       0|1:100:27      0|0:100:76
+9      119082582       .       T       C       .       PASS    AA=T;DP=148     GT:GQ:DP        0|0:83:26       0|1:100:27      0|0:100:97
+2      217633268       rs62176283      G       A       .       PASS    AA=G;DP=141     GT:GQ:DP        0|0:83:26       0|1:100:28      0|0:100:39
+11     129471544       .       T       C       .       PASS    AA=T;DP=111     GT:GQ:DP        0|0:83:26       0|1:100:28      0|0:100:48
+6      5408099 rs6926594       G       A       .       PASS    AA=G;DP=121     GT:GQ:DP        0|0:83:26       0|1:100:28      0|0:100:67
+2      101802827       .       G       A       .       PASS    AA=G;DP=126     GT:GQ:DP        0|0:83:26       0|1:100:28      0|0:100:69
+9      97145695        .       C       T       .       PASS    AA=C;DP=122     GT:GQ:DP        0|0:83:26       0|1:100:28      0|0:100:69
+5      74710720        rs7713331       G       A       .       PASS    AA=G;DP=122     GT:GQ:DP        0|0:83:26       0|1:100:28      0|0:100:70
+11     105377140       rs11226891      T       C       .       PASS    AA=T;DP=126     GT:GQ:DP        0|0:83:26       0|1:100:28      0|0:100:75
+12     114112198       rs16945128      C       A       .       PASS    AA=C;DP=135     GT:GQ:DP        0|0:83:26       0|1:100:28      0|0:100:82
+16     63412289        rs17495513      G       T       .       PASS    AA=T;DP=138     GT:GQ:DP        0|0:83:26       0|1:100:28      0|0:100:85
+3      173209989       .       G       A       .       PASS    AA=g;DP=142     GT:GQ:DP        0|0:83:26       0|1:100:29      0|0:100:44
+2      225751613       .       G       A       .       PASS    AA=G;DP=113     GT:GQ:DP        0|0:83:26       0|1:100:29      0|0:100:58
+18     48306600        .       G       A       .       PASS    AA=G;DP=122     GT:GQ:DP        0|0:83:26       0|1:100:29      0|0:100:71
+11     122604723       .       C       T       .       PASS    AA=C;DP=139     GT:GQ:DP        0|0:83:26       0|1:100:29      0|0:100:82
+16     10814913        rs4781000       A       G       .       PASS    AA=G;DP=138     GT:GQ:DP        0|0:83:26       0|1:100:29      0|0:100:84
+16     58238595        rs7197534       C       T       .       PASS    AA=C;DP=139     GT:GQ:DP        0|0:83:26       0|1:100:29      0|0:100:88
+6      113775507       rs9320441       A       G       .       PASS    AA=a;DP=120     GT:GQ:DP        0|0:83:26       0|1:100:30      0|0:100:64
+7      150086213       .       C       T       .       PASS    AA=C;DP=125     GT:GQ:DP        0|0:83:26       0|1:100:30      0|0:100:69
+11     55027335        .       G       A       .       PASS    AA=G;DP=131     GT:GQ:DP        0|0:83:26       0|1:100:30      0|0:100:75
+10     77491201        .       G       A       .       PASS    AA=G;DP=132     GT:GQ:DP        0|0:83:26       0|1:100:30      0|0:100:77
+1      14604170        rs1328830       C       T       .       PASS    AA=C;DP=135;HM2 GT:GQ:DP        0|0:83:26       0|1:100:30      0|0:100:82
+1      163889979       rs4147603       C       T       .       PASS    AA=T;DP=146     GT:GQ:DP        0|0:83:26       0|1:100:30      0|0:100:91
+1      119663847       rs61296978      T       C       .       PASS    AA=t;DP=145     GT:GQ:DP        0|0:83:26       0|1:100:31      0|0:100:46
+8      3541650 rs2623592       G       C       .       PASS    AA=C;DP=113     GT:GQ:DP        0|0:83:26       0|1:100:31      0|0:100:55
+13     69833017        rs11618004      T       C       .       PASS    AA=T;DP=119     GT:GQ:DP        0|0:83:26       0|1:100:31      0|0:100:61
+6      142048458       rs9321829       G       A       .       PASS    AA=A;DP=129     GT:GQ:DP        0|0:83:26       0|1:100:31      0|0:100:74
+20     164835  .       C       T       .       PASS    AA=C;DP=138     GT:GQ:DP        0|0:83:26       0|1:100:31      0|0:100:80
+22     21457667        rs16992629      T       C       .       PASS    AA=N;DP=146     GT:GQ:DP        0|0:83:26       0|1:100:31      0|0:100:82
+8      118800208       .       G       A       .       PASS    AA=G;DP=116     GT:GQ:DP        0|0:83:26       0|1:100:32      0|0:100:49
+6      165207065       .       C       G       .       PASS    AA=C;DP=125     GT:GQ:DP        0|0:83:26       0|1:100:32      0|0:100:71
+13     82935104        .       A       T       .       PASS    AA=A;DP=138     GT:GQ:DP        0|0:83:26       0|1:100:32      0|0:100:79
+8      13201789        rs1188288       T       A       .       PASS    AA=T;DP=149     GT:GQ:DP        0|0:83:26       0|1:100:32      0|0:100:86
+20     11187036        rs6040485       A       G       .       PASS    AA=G;DP=151     GT:GQ:DP        0|0:83:26       0|1:100:32      0|0:100:95
+22     46644038        rs5768101       T       C       .       PASS    AA=T;DP=128     GT:GQ:DP        0|0:83:26       0|1:100:33      0|0:100:70
+14     29304916        rs12895018      G       T       .       PASS    AA=G;DP=137     GT:GQ:DP        0|0:83:26       0|1:100:34      0|0:100:77
+11     116018392       rs1145184       G       A       .       PASS    AA=G;DP=154     GT:GQ:DP        0|0:83:26       0|1:100:36      0|0:100:91
+1      245698713       .       T       C       .       PASS    AA=T;DP=158     GT:GQ:DP        0|0:83:26       0|1:100:38      0|0:100:95
+16     63712566        .       G       A       .       PASS    AA=G;DP=94      GT:GQ:DP        0|0:83:27       0|1:100:10      0|0:100:56
+17     5397713 rs11656226      G       A       .       PASS    AA=G;DP=109     GT:GQ:DP        0|0:83:27       0|1:100:10      0|0:100:71
+16     62861200        .       G       C       .       PASS    AA=G;DP=114     GT:GQ:DP        0|0:83:27       0|1:100:13      0|0:100:74
+16     77728568        rs57593957      G       A       .       PASS    AA=A;DP=124     GT:GQ:DP        0|0:83:27       0|1:100:14      0|0:100:35
+12     27088024        .       C       T       .       PASS    AA=c;DP=104     GT:GQ:DP        0|0:83:27       0|1:100:14      0|0:100:63
+4      17197443        rs9291657       G       A       .       PASS    AA=G;DP=106     GT:GQ:DP        0|0:83:27       0|1:100:15      0|0:100:64
+12     83875519        .       A       G       .       PASS    AA=A;DP=105     GT:GQ:DP        0|0:83:27       0|1:100:15      0|0:100:66
+7      85935007        rs2056799       A       G       .       PASS    AA=A;DP=124     GT:GQ:DP        0|0:83:27       0|1:100:15      0|0:100:81
+3      136077959       .       T       G       .       PASS    AA=T;DP=144     GT:GQ:DP        0|0:83:27       0|1:100:17      0|0:100:58
+20     50420798        rs6068154       A       G       .       PASS    AA=A;DP=136     GT:GQ:DP        0|0:83:27       0|1:100:18      0|0:100:41
+11     42363157        rs12418911      C       A       .       PASS    AA=C;DP=98      GT:GQ:DP        0|0:83:27       0|1:100:18      0|0:100:54
+2      54039248        .       T       C       .       PASS    AA=T;DP=102     GT:GQ:DP        0|0:83:27       0|1:100:18      0|0:100:56
+5      119338348       .       T       C       .       PASS    AA=T;DP=96      GT:GQ:DP        0|0:83:27       0|1:100:19      0|0:100:50
+4      159560450       rs7675213       G       C       .       PASS    AA=G;DP=104     GT:GQ:DP        0|0:83:27       0|1:100:19      0|0:100:56
+9      8169432 rs12004530      G       A       .       PASS    AA=A;DP=120     GT:GQ:DP        0|0:83:27       0|1:100:19      0|0:96:33
+10     84922826        .       G       T       .       PASS    AA=G;DP=96      GT:GQ:DP        0|0:83:27       0|1:100:21      0|0:100:48
+7      78890070        rs17488042      A       G       .       PASS    AA=A;DP=121     GT:GQ:DP        0|0:83:27       0|1:100:21      0|0:100:69
+14     76663923        rs7158268       C       T       .       PASS    AA=c;DP=134     GT:GQ:DP        0|0:83:27       0|1:100:21      0|0:100:81
+1      3560870 rs12097483      A       G       .       PASS    AA=A;DP=128;HM2;HM3     GT:GQ:DP        0|0:83:27       0|1:100:21      0|0:100:82
+4      54316472        rs6852807       A       G       .       PASS    AA=A;DP=129     GT:GQ:DP        0|0:83:27       0|1:100:22      0|0:100:35
+8      97547775        .       G       T       .       PASS    AA=G;DP=102     GT:GQ:DP        0|0:83:27       0|1:100:23      0|0:100:52
+17     52884677        .       C       T       .       PASS    AA=c;DP=113     GT:GQ:DP        0|0:83:27       0|1:100:23      0|0:100:63
+4      86276784        .       T       C       .       PASS    AA=T;DP=112     GT:GQ:DP        0|0:83:27       0|1:100:23      0|0:100:65
+3      189618298       .       T       C       .       PASS    AA=T;DP=134     GT:GQ:DP        0|0:83:27       0|1:100:23      0|0:100:68
+6      113821022       rs62421559      T       C       .       PASS    AA=T;DP=135     GT:GQ:DP        0|0:83:27       0|1:100:23      0|0:100:71
+11     79047385        rs621384        C       T       .       PASS    AA=C;DP=136     GT:GQ:DP        0|0:83:27       0|1:100:23      0|0:100:87
+1      63428502        rs4253945       C       T       .       PASS    AA=C;DP=138;HM2;HM3     GT:GQ:DP        0|0:83:27       0|1:100:23      0|0:100:89
+18     14103835        rs28874066      G       A       .       PASS    AA=g;DP=137     GT:GQ:DP        0|0:83:27       0|1:100:24      0|0:100:40
+12     93511768        .       C       G       .       PASS    AA=C;DP=104     GT:GQ:DP        0|0:83:27       0|1:100:24      0|0:100:55
+7      105995772       rs41471551      T       G       .       PASS    AA=T;DP=109     GT:GQ:DP        0|0:83:27       0|1:100:24      0|0:100:56
+8      87738557        .       C       T       .       PASS    AA=c;DP=117     GT:GQ:DP        0|0:83:27       0|1:100:24      0|0:100:67
+13     84440888        rs6563427       A       G       .       PASS    AA=a;DP=104     GT:GQ:DP        0|0:83:27       0|1:100:25      0|0:100:53
+11     131204230       .       C       T       .       PASS    AA=C;DP=114     GT:GQ:DP        0|0:83:27       0|1:100:25      0|0:100:63
+14     95314611        rs61126218      C       A       .       PASS    AA=C;DP=123     GT:GQ:DP        0|0:83:27       0|1:100:25      0|0:100:72
+2      67858439        .       T       C       .       PASS    AA=T;DP=122     GT:GQ:DP        0|0:83:27       0|1:100:25      0|0:100:73
+5      33852190        rs895367        T       C       .       PASS    AA=T;DP=132     GT:GQ:DP        0|0:83:27       0|1:100:25      0|0:100:76
+6      99065109        rs150393        C       T       .       PASS    AA=C;DP=124     GT:GQ:DP        0|0:83:27       0|1:100:26      0|0:100:71
+3      110654827       .       G       A       .       PASS    AA=g;DP=136     GT:GQ:DP        0|0:83:27       0|1:100:26      0|0:100:83
+3      44612638        .       A       G       .       PASS    AA=A;DP=141     GT:GQ:DP        0|0:83:27       0|1:100:26      0|0:100:84
+5      32146939        .       C       G       .       PASS    AA=C;DP=138     GT:GQ:DP        0|0:83:27       0|1:100:27      0|0:100:37
+3      22618474        .       T       C       .       PASS    AA=T;DP=146     GT:GQ:DP        0|0:83:27       0|1:100:27      0|0:100:39
+11     44847304        rs12802407      A       C       .       PASS    AA=A;DP=147     GT:GQ:DP        0|0:83:27       0|1:100:27      0|0:100:52
+2      158668732       rs10164918      T       G       .       PASS    AA=T;DP=121     GT:GQ:DP        0|0:83:27       0|1:100:27      0|0:100:60
+2      18083368        .       C       T       .       PASS    AA=T;DP=127     GT:GQ:DP        0|0:83:27       0|1:100:27      0|0:100:71
+3      175275508       rs1404776       T       A       .       PASS    AA=A;DP=128     GT:GQ:DP        0|0:83:27       0|1:100:27      0|0:100:77
+13     77991770        .       G       A       .       PASS    AA=G;DP=137     GT:GQ:DP        0|0:83:27       0|1:100:27      0|0:99:34
+10     128691306       .       A       G       .       PASS    AA=a;DP=159     GT:GQ:DP        0|0:83:27       0|1:100:28      0|0:100:65
+15     74254117        rs55862704      T       C       .       PASS    AA=T;DP=139     GT:GQ:DP        0|0:83:27       0|1:100:28      0|0:100:88
+7      1704393 .       T       A       .       PASS    AA=T;DP=129     GT:GQ:DP        0|0:83:27       0|1:100:30      0|0:100:72
+6      40263712        .       C       T       .       PASS    AA=T;DP=156     GT:GQ:DP        0|0:83:27       0|1:100:30      0|0:100:78
+1      38617544        rs17537884      G       A       .       PASS    AA=G;DP=163;HM2 GT:GQ:DP        0|0:83:27       0|1:100:31      0|0:100:45
+4      92708236        rs34993958      A       G       .       PASS    AA=A;DP=149     GT:GQ:DP        0|0:83:27       0|1:100:31      0|0:100:45
+5      155976081       .       T       C       .       PASS    AA=T;DP=158     GT:GQ:DP        0|0:83:27       0|1:100:31      0|0:100:52
+3      3181833 .       C       T       .       PASS    AA=C;DP=138     GT:GQ:DP        0|0:83:27       0|1:100:31      0|0:100:76
+8      17298343        rs6989191       C       T       .       PASS    AA=C;DP=139     GT:GQ:DP        0|0:83:27       0|1:100:31      0|0:100:83
+7      25764213        rs17152605      A       G       .       PASS    AA=A;DP=124     GT:GQ:DP        0|0:83:27       0|1:100:34      0|0:100:62
+3      141368422       .       A       G       .       PASS    AA=A;DP=154     GT:GQ:DP        0|0:83:27       0|1:100:35      0|0:100:49
+17     8721449 rs8082412       A       G       .       PASS    AA=G;DP=80      GT:GQ:DP        0|0:83:27       0|1:100:7       0|0:100:44
+15     90853043        rs16946983      A       G       .       PASS    AA=A;DP=83      GT:GQ:DP        0|0:83:27       1|0:100:13      0|1:100:44
+18     68927324        .       T       A       .       PASS    AA=T;DP=90      GT:GQ:DP        0|0:83:27       1|0:100:13      0|1:100:51
+12     80977434        rs7307019       A       G       .       PASS    AA=G;DP=102     GT:GQ:DP        0|0:83:27       1|0:100:15      0|1:100:62
+14     22982699        .       C       A       .       PASS    AA=C;DP=114     GT:GQ:DP        0|0:83:27       1|0:100:15      0|1:100:72
+1      48544410        .       G       A       .       PASS    AA=G;DP=90      GT:GQ:DP        0|0:83:27       1|0:100:16      0|1:100:47
+19     55847110        .       T       C       .       PASS    AA=t;DP=98      GT:GQ:DP        0|0:83:27       1|0:100:16      0|1:100:56
+1      72116771        rs61072543      T       C       .       PASS    AA=T;DP=95      GT:GQ:DP        0|0:83:27       1|0:100:17      0|1:100:52
+7      79677777        .       G       A       .       PASS    AA=G;DP=95      GT:GQ:DP        0|0:83:27       1|0:100:17      0|1:100:53
+6      140001863       rs6917655       A       T       .       PASS    AA=T;DP=105     GT:GQ:DP        0|0:83:27       1|0:100:17      0|1:100:61
+13     78184717        .       C       G       .       PASS    AA=C;DP=107     GT:GQ:DP        0|0:83:27       1|0:100:17      0|1:100:62
+6      45499740        rs3805812       A       G       .       PASS    AA=A;DP=108     GT:GQ:DP        0|0:83:27       1|0:100:17      0|1:100:63
+6      47482747        .       C       T       .       PASS    AA=C;DP=123     GT:GQ:DP        0|0:83:27       1|0:100:17      0|1:100:64
+5      120125005       .       A       G       .       PASS    AA=A;DP=112     GT:GQ:DP        0|0:83:27       1|0:100:17      0|1:100:71
+10     109374074       rs61365301      C       T       .       PASS    AA=T;DP=88      GT:GQ:DP        0|0:83:27       1|0:100:18      0|1:100:41
+5      31446228        rs3805520       A       G       .       PASS    AA=A;DP=99      GT:GQ:DP        0|0:83:27       1|0:100:18      0|1:100:53
+10     107322346       rs61868783      T       C       .       PASS    AA=T;DP=108     GT:GQ:DP        0|0:83:27       1|0:100:18      0|1:100:62
+16     66726521        rs59964771      G       T       .       PASS    AA=G;DP=109     GT:GQ:DP        0|0:83:27       1|0:100:18      0|1:100:65
+9      133436763       rs35877293      G       A       .       PASS    AA=G;DP=112     GT:GQ:DP        0|0:83:27       1|0:100:18      0|1:100:67
+6      133358074       .       A       G       .       PASS    AA=A;DP=117     GT:GQ:DP        0|0:83:27       1|0:100:18      0|1:100:72
+11     106481081       rs7128646       A       G       .       PASS    AA=A;DP=117     GT:GQ:DP        0|0:83:27       1|0:100:18      0|1:100:73
+6      135716637       rs10484492      A       T       .       PASS    AA=T;DP=90      GT:GQ:DP        0|0:83:27       1|0:100:19      0|1:100:45
+12     129791564       rs11061121      C       T       .       PASS    AA=N;DP=90      GT:GQ:DP        0|0:83:27       1|0:100:19      0|1:100:46
+6      3815995 rs58026922      G       A       .       PASS    AA=.;DP=93      GT:GQ:DP        0|0:83:27       1|0:100:19      0|1:100:48
+12     114647643       rs12300693      C       A       .       PASS    AA=C;DP=100     GT:GQ:DP        0|0:83:27       1|0:100:19      0|1:100:54
+16     1471236 rs58919644      A       G       .       PASS    AA=N;DP=108     GT:GQ:DP        0|0:83:27       1|0:100:19      0|1:100:62
+2      139908967       rs56322030      C       A       .       PASS    AA=C;DP=113     GT:GQ:DP        0|0:83:27       1|0:100:19      0|1:100:65
+4      68059195        .       A       G       .       PASS    AA=A;DP=118     GT:GQ:DP        0|0:83:27       1|0:100:19      0|1:100:71
+14     81946819        .       C       T       .       PASS    AA=C;DP=89      GT:GQ:DP        0|0:83:27       1|0:100:20      0|1:100:42
+14     100055445       .       T       G       .       PASS    AA=T;DP=99      GT:GQ:DP        0|0:83:27       1|0:100:20      0|1:100:52
+11     94183168        .       A       G       .       PASS    AA=A;DP=104     GT:GQ:DP        0|0:83:27       1|0:100:20      0|1:100:58
+21     21600361        rs1596572       G       A       .       PASS    AA=G;DP=107     GT:GQ:DP        0|0:83:27       1|0:100:20      0|1:100:59
+4      66332518        rs56265815      G       T       .       PASS    AA=G;DP=109     GT:GQ:DP        0|0:83:27       1|0:100:20      0|1:100:62
+20     15796879        rs6135575       C       T       .       PASS    AA=C;DP=116     GT:GQ:DP        0|0:83:27       1|0:100:20      0|1:100:69
+11     99851426        .       C       G       .       PASS    AA=C;DP=114     GT:GQ:DP        0|0:83:27       1|0:100:20      0|1:100:71
+8      4800220 rs10081536      G       T       .       PASS    AA=G;DP=98      GT:GQ:DP        0|0:83:27       1|0:100:21      0|1:100:37
+1      4225215 .       G       A       .       PASS    AA=G;DP=94      GT:GQ:DP        0|0:83:27       1|0:100:21      0|1:100:46
+4      183394314       .       T       G       .       PASS    AA=T;DP=104     GT:GQ:DP        0|0:83:27       1|0:100:21      0|1:100:56
+9      8925209 rs9299081       A       G       .       PASS    AA=A;DP=104     GT:GQ:DP        0|0:83:27       1|0:100:21      0|1:100:57
+6      90210617        rs10944446      A       G       .       PASS    AA=A;DP=108     GT:GQ:DP        0|0:83:27       1|0:100:21      0|1:100:61
+3      117008792       .       C       T       .       PASS    AA=C;DP=117     GT:GQ:DP        0|0:83:27       1|0:100:21      0|1:100:72
+2      143217710       .       G       A       .       PASS    AA=G;DP=118     GT:GQ:DP        0|0:83:27       1|0:100:21      0|1:100:73
+15     44410792        .       A       G       .       PASS    AA=A;DP=119     GT:GQ:DP        0|0:83:27       1|0:100:22      0|1:100:30
+3      122691080       .       T       A       .       PASS    AA=T;DP=114     GT:GQ:DP        0|0:83:27       1|0:100:22      0|1:100:49
+7      105711046       .       T       C       .       PASS    AA=T;DP=100     GT:GQ:DP        0|0:83:27       1|0:100:22      0|1:100:56
+3      193560572       .       G       T       .       PASS    AA=G;DP=105     GT:GQ:DP        0|0:83:27       1|0:100:22      0|1:100:59
+13     28714276        .       C       T       .       PASS    AA=c;DP=127     GT:GQ:DP        0|0:83:27       1|0:100:22      0|1:100:75
+7      54280665        rs13437953      C       A       .       PASS    AA=C;DP=122     GT:GQ:DP        0|0:83:27       1|0:100:22      0|1:100:77
+6      134654579       rs9376027       A       C       .       PASS    AA=A;DP=141     GT:GQ:DP        0|0:83:27       1|0:100:22      0|1:100:80
+10     29694710        rs11816567      C       A       .       PASS    AA=C;DP=128     GT:GQ:DP        0|0:83:27       1|0:100:22      0|1:100:83
+15     75567393        .       A       T       .       PASS    AA=A;DP=135     GT:GQ:DP        0|0:83:27       1|0:100:23      0|1:100:37
+14     47391380        .       A       T       .       PASS    AA=A;DP=102     GT:GQ:DP        0|0:83:27       1|0:100:23      0|1:100:48
+10     84823457        rs10885686      C       T       .       PASS    AA=C;DP=108     GT:GQ:DP        0|0:83:27       1|0:100:23      0|1:100:57
+3      149875903       rs275670        C       T       .       PASS    AA=G;DP=107     GT:GQ:DP        0|0:83:27       1|0:100:23      0|1:100:57
+1      200189382       rs17473434      T       C       .       PASS    AA=T;DP=109;HM2;HM3     GT:GQ:DP        0|0:83:27       1|0:100:23      0|1:100:59
+16     17965832        rs34637793      G       T       .       PASS    AA=T;DP=115     GT:GQ:DP        0|0:83:27       1|0:100:23      0|1:100:67
+2      13969906        rs8179624       G       A       .       PASS    AA=G;DP=133     GT:GQ:DP        0|0:83:27       1|0:100:23      0|1:100:80
+10     133302255       rs9419605       C       T       .       PASS    AA=-;DP=134     GT:GQ:DP        0|0:83:27       1|0:100:23      0|1:100:84
+7      154366924       rs6970365       C       G       .       PASS    AA=C;DP=136     GT:GQ:DP        0|0:83:27       1|0:100:23      0|1:100:86
+4      181484198       rs28521449      G       A       .       PASS    AA=-;DP=102     GT:GQ:DP        0|0:83:27       1|0:100:24      0|1:100:29
+8      110731237       .       C       T       .       PASS    AA=C;DP=147     GT:GQ:DP        0|0:83:27       1|0:100:24      0|1:100:45
+8      16273103        .       G       T       .       PASS    AA=A;DP=103     GT:GQ:DP        0|0:83:27       1|0:100:24      0|1:100:51
+6      27757085        .       C       G       .       PASS    AA=C;DP=133     GT:GQ:DP        0|0:83:27       1|0:100:24      0|1:100:83
+17     75922841        rs55731085      G       A       .       PASS    AA=G;DP=135     GT:GQ:DP        0|0:83:27       1|0:100:24      0|1:100:84
+9      77838844        rs57687736      G       A       .       PASS    AA=g;DP=104     GT:GQ:DP        0|0:83:27       1|0:100:25      0|1:100:52
+5      73811089        .       T       C       .       PASS    AA=T;DP=113     GT:GQ:DP        0|0:83:27       1|0:100:25      0|1:100:58
+8      75418640        rs57423254      A       G       .       PASS    AA=A;DP=113     GT:GQ:DP        0|0:83:27       1|0:100:25      0|1:100:59
+8      3023215 rs7013111       T       C       .       PASS    AA=t;DP=115     GT:GQ:DP        0|0:83:27       1|0:100:25      0|1:100:64
+3      104547907       rs35736045      G       T       .       PASS    AA=G;DP=125     GT:GQ:DP        0|0:83:27       1|0:100:25      0|1:100:73
+12     92091826        rs7300219       G       T       .       PASS    AA=G;DP=133     GT:GQ:DP        0|0:83:27       1|0:100:25      0|1:100:81
+5      133440550       .       T       G       .       PASS    AA=T;DP=137     GT:GQ:DP        0|0:83:27       1|0:100:25      0|1:100:85
+5      118611449       .       G       C       .       PASS    AA=G;DP=99      GT:GQ:DP        0|0:83:27       1|0:100:26      0|1:100:44
+7      65398971        .       A       G       .       PASS    AA=A;DP=109     GT:GQ:DP        0|0:83:27       1|0:100:26      0|1:100:59
+3      117462828       rs12634800      C       A       .       PASS    AA=C;DP=112     GT:GQ:DP        0|0:83:27       1|0:100:26      0|1:100:60
+1      56401322        rs58563317      T       G       .       PASS    AA=T;DP=118     GT:GQ:DP        0|0:83:27       1|0:100:26      0|1:100:63
+9      110131522       .       A       C       .       PASS    AA=A;DP=117     GT:GQ:DP        0|0:83:27       1|0:100:26      0|1:100:65
+16     73081325        rs7199205       C       G       .       PASS    AA=C;DP=117     GT:GQ:DP        0|0:83:27       1|0:100:26      0|1:100:66
+15     25736573        rs7169607       C       T       .       PASS    AA=C;DP=134     GT:GQ:DP        0|0:83:27       1|0:100:26      0|1:100:78
+13     59091384        rs56341261      A       G       .       PASS    AA=A;DP=132     GT:GQ:DP        0|0:83:27       1|0:100:26      0|1:100:80
+2      99369038        .       A       G       .       PASS    AA=A;DP=134     GT:GQ:DP        0|0:83:27       1|0:100:27      0|1:100:38
+11     9978367 rs2403261       T       C       .       PASS    AA=C;DP=109     GT:GQ:DP        0|0:83:27       1|0:100:27      0|1:100:55
+2      199244585       rs7568972       G       A       .       PASS    AA=G;DP=109     GT:GQ:DP        0|0:83:27       1|0:100:27      0|1:100:55
+12     106977676       .       A       C       .       PASS    AA=A;DP=113     GT:GQ:DP        0|0:83:27       1|0:100:27      0|1:100:58
+2      146992405       rs10180627      G       A       .       PASS    AA=G;DP=119     GT:GQ:DP        0|0:83:27       1|0:100:27      0|1:100:67
+21     35261108        rs56662274      T       G       .       PASS    AA=T;DP=123     GT:GQ:DP        0|0:83:27       1|0:100:27      0|1:100:69
+5      8356911 rs10512951      T       C       .       PASS    AA=T;DP=129     GT:GQ:DP        0|0:83:27       1|0:100:27      0|1:100:72
+17     13784469        rs58316168      G       T       .       PASS    AA=G;DP=101     GT:GQ:DP        0|0:83:27       1|0:100:28      0|1:100:33
+7      126718086       .       G       A       .       PASS    AA=G;DP=152     GT:GQ:DP        0|0:83:27       1|0:100:28      0|1:100:48
+5      5436500 .       C       T       .       PASS    AA=C;DP=132     GT:GQ:DP        0|0:83:27       1|0:100:28      0|1:100:75
+2      82528156        rs11886964      C       A       .       PASS    AA=C;DP=106     GT:GQ:DP        0|0:83:27       1|0:100:29      0|1:100:38
+17     41518529        rs12449423      C       T       .       PASS    AA=C;DP=107     GT:GQ:DP        0|0:83:27       1|0:100:29      0|1:100:52
+11     54937597        rs1216209       G       T       .       PASS    AA=.;DP=108     GT:GQ:DP        0|0:83:27       1|0:100:29      0|1:100:53
+14     87884811        rs10135624      C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        0|0:83:27       1|0:100:29      0|1:100:64
+2      223443488       rs35585948      G       A       .       PASS    AA=G;DP=131     GT:GQ:DP        0|0:83:27       1|0:100:29      0|1:100:76
+6      130232536       rs17058099      A       C       .       PASS    AA=A;DP=138     GT:GQ:DP        0|0:83:27       1|0:100:29      0|1:100:79
+8      65281158        .       A       G       .       PASS    AA=G;DP=139     GT:GQ:DP        0|0:83:27       1|0:100:29      0|1:100:86
+4      120661876       rs10004484      C       T       .       PASS    AA=T;DP=113     GT:GQ:DP        0|0:83:27       1|0:100:30      0|1:100:56
+18     27063572        rs12964443      A       C       .       PASS    AA=.;DP=130     GT:GQ:DP        0|0:83:27       1|0:100:30      0|1:100:76
+2      49366401        rs59489188      A       G       .       PASS    AA=A;DP=138     GT:GQ:DP        0|0:83:27       1|0:100:30      0|1:100:79
+18     21082149        rs62083928      A       G       .       PASS    AA=A;DP=143     GT:GQ:DP        0|0:83:27       1|0:100:30      0|1:100:86
+1      91044729        rs1591470       A       G       .       PASS    AA=a;DP=144     GT:GQ:DP        0|0:83:27       1|0:100:30      0|1:100:88
+1      145444244       rs17160291      C       T       .       PASS    AA=c;DP=150     GT:GQ:DP        0|0:83:27       1|0:100:30      0|1:100:92
+9      1601419 .       A       G       .       PASS    AA=G;DP=121     GT:GQ:DP        0|0:83:27       1|0:100:31      0|1:100:62
+14     74111202        rs61980910      G       A       .       PASS    AA=G;DP=125     GT:GQ:DP        0|0:83:27       1|0:100:31      0|1:100:67
+2      7741900 .       A       G       .       PASS    AA=A;DP=131     GT:GQ:DP        0|0:83:27       1|0:100:31      0|1:100:74
+8      141286531       .       G       A       .       PASS    AA=G;DP=136     GT:GQ:DP        0|0:83:27       1|0:100:31      0|1:100:76
+6      126089523       .       T       G       .       PASS    AA=T;DP=128     GT:GQ:DP        0|0:83:27       1|0:100:32      0|1:100:68
+9      124279617       .       G       C       .       PASS    AA=C;DP=128     GT:GQ:DP        0|0:83:27       1|0:100:32      0|1:100:70
+11     27844709        rs966243        T       C       .       PASS    AA=T;DP=140     GT:GQ:DP        0|0:83:27       1|0:100:32      0|1:100:83
+7      148564869       rs10250080      A       C       .       PASS    AA=A;DP=131     GT:GQ:DP        0|0:83:27       1|0:100:33      0|1:100:74
+21     30161325        .       G       A       .       PASS    AA=G;DP=143     GT:GQ:DP        0|0:83:27       1|0:100:33      0|1:100:85
+14     47618051        rs61466415      C       T       .       PASS    AA=C;DP=127     GT:GQ:DP        0|0:83:27       1|0:100:34      0|1:100:67
+7      26606970        .       T       G       .       PASS    AA=T;DP=128     GT:GQ:DP        0|0:83:27       1|0:100:34      0|1:100:68
+9      124082923       .       G       A       .       PASS    AA=G;DP=130     GT:GQ:DP        0|0:83:27       1|0:100:34      0|1:100:68
+19     61837201        rs11881636      A       G       .       PASS    AA=A;DP=136     GT:GQ:DP        0|0:83:27       1|0:100:34      0|1:100:73
+2      237999481       rs6711202       T       C       .       PASS    AA=T;DP=138     GT:GQ:DP        0|0:83:27       1|0:100:34      0|1:100:79
+3      99954940        .       A       G       .       PASS    AA=A;DP=150     GT:GQ:DP        0|0:83:27       1|0:100:35      0|1:100:45
+12     82753618        .       C       A       .       PASS    AA=C;DP=129     GT:GQ:DP        0|0:83:27       1|0:100:35      0|1:100:69
+9      8268800 rs59515492      G       A       .       PASS    AA=G;DP=150     GT:GQ:DP        0|0:83:27       1|0:100:40      0|1:100:44
+15     100205087       .       C       G       .       PASS    AA=N;DP=165     GT:GQ:DP        0|0:83:27       1|0:100:47      0|1:100:89
+12     41310720        rs1922760       T       C       .       PASS    AA=T;DP=114     GT:GQ:DP        0|0:83:27       1|0:21:18       0|1:100:68
+1      177640278       rs4562582       C       A       .       PASS    AA=C;DP=118     GT:GQ:DP        0|0:83:27       1|0:22:16       0|1:100:79
+9      109985151       rs607056        C       T       .       PASS    AA=C;DP=121     GT:GQ:DP        0|0:83:27       1|0:23:22       0|1:100:74
+20     30007462        rs6061050       G       A       .       PASS    AA=G;DP=113     GT:GQ:DP        0|0:83:27       1|0:33:13       0|1:100:74
+3      69638555        .       G       T       .       PASS    AA=g;DP=80      GT:GQ:DP        0|0:83:27       1|0:41:16       0|1:100:31
+22     41940848        rs11912292      C       T       .       PASS    AA=C;DP=135     GT:GQ:DP        0|0:83:27       1|0:43:16       0|1:100:45
+14     44017747        rs2282279       C       T       .       PASS    AA=C;DP=117     GT:GQ:DP        0|0:83:27       1|0:51:22       0|1:100:69
+21     41396070        rs1029011       C       T       .       PASS    AA=T;DP=97      GT:GQ:DP        0|0:83:27       1|0:53:9        0|1:100:62
+21     44036144        rs2838364       C       T       .       PASS    AA=C;DP=93      GT:GQ:DP        0|0:83:27       1|0:56:11       0|1:100:44
+15     22445471        .       G       A       .       PASS    AA=g;DP=95      GT:GQ:DP        0|0:83:27       1|0:56:20       0|1:100:34
+6      38268913        rs9462409       C       T       .       PASS    AA=C;DP=104     GT:GQ:DP        0|0:83:27       1|0:57:11       0|1:100:67
+3      186313852       rs13069476      G       C       .       PASS    AA=G;DP=93      GT:GQ:DP        0|0:83:27       1|0:61:15       0|1:100:53
+16     26704279        .       C       T       .       PASS    AA=T;DP=107     GT:GQ:DP        0|0:83:27       1|0:63:19       0|1:100:62
+17     25870241        .       A       G       .       PASS    AA=A;DP=119     GT:GQ:DP        0|0:83:27       1|0:64:16       0|1:100:75
+18     13128956        .       C       T       .       PASS    AA=C;DP=119     GT:GQ:DP        0|0:83:27       1|0:64:18       0|1:100:75
+3      6156135 .       G       T       .       PASS    AA=G;DP=98      GT:GQ:DP        0|0:83:27       1|0:64:21       0|1:100:49
+6      115782320       rs9488638       G       A       .       PASS    AA=g;DP=88      GT:GQ:DP        0|0:83:27       1|0:66:14       0|1:100:46
+11     80578713        rs7121180       G       T       .       PASS    AA=T;DP=102     GT:GQ:DP        0|0:83:27       1|0:67:15       0|1:100:62
+17     38505172        rs8176140       T       A       .       PASS    AA=A;DP=91      GT:GQ:DP        0|0:83:27       1|0:68:11       0|1:100:53
+13     67926414        rs504104        T       G       .       PASS    AA=G;DP=73      GT:GQ:DP        0|0:83:27       1|0:68:14       0|1:100:32
+15     20397471        .       C       T       .       PASS    AA=c;DP=127     GT:GQ:DP        0|0:83:27       1|0:68:33       0|1:100:68
+5      6606599 rs2459721       C       T       .       PASS    AA=C;DP=104     GT:GQ:DP        0|0:83:27       1|0:70:15       0|1:100:63
+13     21648222        rs17076318      G       A       .       PASS    AA=G;DP=111     GT:GQ:DP        0|0:83:27       1|0:72:19       0|1:100:63
+15     63949195        .       C       G       .       PASS    AA=C;DP=122     GT:GQ:DP        0|0:83:27       1|0:73:18       0|1:100:77
+5      167532796       rs7707882       C       A       .       PASS    AA=A;DP=135     GT:GQ:DP        0|0:83:27       1|0:73:21       0|1:100:43
+5      2448301 rs60350820      C       T       .       PASS    AA=C;DP=87      GT:GQ:DP        0|0:83:27       1|0:74:12       0|1:100:42
+5      170120842       .       C       A       .       PASS    AA=C;DP=119     GT:GQ:DP        0|0:83:27       1|0:74:14       0|1:100:76
+19     60555252        .       G       A       .       PASS    AA=G;DP=102     GT:GQ:DP        0|0:83:27       1|0:76:10       0|1:100:64
+5      14236184        .       A       G       .       PASS    AA=A;DP=102     GT:GQ:DP        0|0:83:27       1|0:78:10       0|1:100:66
+13     54712643        .       G       C       .       PASS    AA=G;DP=100     GT:GQ:DP        0|0:83:27       1|0:78:15       0|1:100:59
+15     23685212        .       G       T       .       PASS    AA=G;DP=99      GT:GQ:DP        0|0:83:27       1|0:79:15       0|1:100:55
+6      80617518        rs11754406      A       G       .       PASS    AA=A;DP=108     GT:GQ:DP        0|0:83:27       1|0:79:21       0|1:100:60
+18     48508399        rs8082879       A       G       .       PASS    AA=T;DP=95      GT:GQ:DP        0|0:83:27       1|0:83:15       0|1:100:54
+17     56587797        rs60721624      C       T       .       PASS    AA=C;DP=130     GT:GQ:DP        0|0:83:27       1|0:83:33       0|1:100:72
+10     127102360       .       C       T       .       PASS    AA=C;DP=127     GT:GQ:DP        0|0:83:27       1|0:84:15       0|1:100:84
+13     30519474        rs9535447       C       T       .       PASS    AA=C;DP=101     GT:GQ:DP        0|0:83:27       1|0:84:19       0|1:100:55
+6      72099905        rs828629        A       G       .       PASS    AA=G;DP=123     GT:GQ:DP        0|0:83:27       1|0:85:22       0|1:100:75
+6      68438385        .       A       G       .       PASS    AA=.;DP=80      GT:GQ:DP        0|0:83:27       1|0:85:9        0|1:100:41
+15     86733570        .       G       A       .       PASS    AA=G;DP=116     GT:GQ:DP        0|0:83:27       1|0:86:28       0|1:100:61
+1      37308107        .       G       A       .       PASS    AA=G;DP=105     GT:GQ:DP        0|0:83:27       1|0:87:12       0|1:100:66
+10     84904442        rs10885854      C       G       .       PASS    AA=c;DP=120     GT:GQ:DP        0|0:83:27       1|0:87:22       0|1:100:68
+10     56749998        rs34984089      G       C       .       PASS    AA=-;DP=83      GT:GQ:DP        0|0:83:27       1|0:88:15       0|1:100:41
+20     18742754        rs1053839       C       T       .       PASS    AA=C;DP=94      GT:GQ:DP        0|0:83:27       1|0:93:12       0|1:100:59
+20     769593  rs6038929       C       T       .       PASS    AA=T;DP=129     GT:GQ:DP        0|0:83:27       1|0:96:18       0|1:100:85
+15     37765544        .       G       A       .       PASS    AA=G;DP=102     GT:GQ:DP        0|0:83:27       1|0:96:22       0|1:100:54
+3      69515147        rs2018997       C       T       .       PASS    AA=T;DP=79      GT:GQ:DP        0|0:83:27       1|0:98:15       0|1:100:31
+2      64509913        rs13391261      G       A       .       PASS    AA=A;DP=101     GT:GQ:DP        0|0:83:27       1|0:99:16       0|1:100:62
+17     12054475        rs9897735       C       T       .       PASS    AA=c;DP=95      GT:GQ:DP        0|0:83:27       1|0:99:23       0|1:100:50
+2      105765771       .       A       G       .       PASS    AA=A;DP=106     GT:GQ:DP        0|0:83:28       0|1:100:15      0|0:100:63
+10     80848193        rs2894395       A       T       .       PASS    AA=A;DP=113     GT:GQ:DP        0|0:83:28       0|1:100:18      0|0:100:66
+1      193720973       rs60386229      G       C       .       PASS    AA=G;DP=110     GT:GQ:DP        0|0:83:28       0|1:100:21      0|0:100:59
+7      28485324        rs217511        C       T       .       PASS    AA=C;DP=137     GT:GQ:DP        0|0:83:28       0|1:100:22      0|0:100:74
+6      82830328        rs58708235      C       T       .       PASS    AA=T;DP=116     GT:GQ:DP        0|0:83:28       0|1:100:24      0|0:100:66
+5      107022523       rs6896050       T       C       .       PASS    AA=T;DP=125     GT:GQ:DP        0|0:83:28       0|1:100:25      0|0:100:72
+5      25830378        .       C       T       .       PASS    AA=T;DP=116     GT:GQ:DP        0|0:83:28       0|1:100:28      0|0:100:59
+8      136089159       .       T       C       .       PASS    AA=T;DP=151     GT:GQ:DP        0|0:83:28       0|1:100:32      0|0:100:45
+18     40215655        rs28752095      A       C       .       PASS    AA=A;DP=138     GT:GQ:DP        0|0:83:28       0|1:100:38      0|0:100:74
+5      88651463        rs16867539      A       G       .       PASS    AA=A;DP=81      GT:GQ:DP        0|0:83:28       1|0:100:16      0|1:100:27
+14     35675499        rs58474460      T       C       .       PASS    AA=T;DP=114     GT:GQ:DP        0|0:83:28       1|0:100:17      0|1:100:32
+4      77318254        rs4634246       C       T       .       PASS    AA=C;DP=90      GT:GQ:DP        0|0:83:28       1|0:100:17      0|1:100:35
+19     48677863        rs11665812      C       T       .       PASS    AA=T;DP=136     GT:GQ:DP        0|0:83:28       1|0:100:17      0|1:100:54
+5      179756683       rs57296868      C       G       .       PASS    AA=G;DP=116     GT:GQ:DP        0|0:83:28       1|0:100:17      0|1:100:70
+10     70308927        rs12266239      A       G       .       PASS    AA=A;DP=125     GT:GQ:DP        0|0:83:28       1|0:100:17      0|1:100:76
+15     55857434        .       C       T       .       PASS    AA=C;DP=113     GT:GQ:DP        0|0:83:28       1|0:100:18      0|1:100:68
+5      38072456        rs10051158      T       C       .       PASS    AA=T;DP=115     GT:GQ:DP        0|0:83:28       1|0:100:18      0|1:100:71
+15     63104741        rs2899706       T       C       .       PASS    AA=T;DP=93      GT:GQ:DP        0|0:83:28       1|0:100:19      0|1:100:46
+5      160113781       rs59803502      G       A       .       PASS    AA=G;DP=98      GT:GQ:DP        0|0:83:28       1|0:100:19      0|1:100:50
+8      2809069 .       T       C       .       PASS    AA=T;DP=112     GT:GQ:DP        0|0:83:28       1|0:100:19      0|1:100:67
+6      102230617       rs9390766       A       G       .       PASS    AA=A;DP=88      GT:GQ:DP        0|0:83:28       1|0:100:20      0|1:100:41
+16     8414747 .       C       A       .       PASS    AA=C;DP=99      GT:GQ:DP        0|0:83:28       1|0:100:20      0|1:100:51
+10     8304160 rs7087228       G       A       .       PASS    AA=G;DP=119     GT:GQ:DP        0|0:83:28       1|0:100:20      0|1:100:72
+2      120840471       rs6741725       G       A       .       PASS    AA=G;DP=122     GT:GQ:DP        0|0:83:28       1|0:100:20      0|1:100:74
+5      51108406        .       A       G       .       PASS    AA=A;DP=113     GT:GQ:DP        0|0:83:28       1|0:100:21      0|1:100:64
+7      38733716        rs57865190      T       G       .       PASS    AA=T;DP=115     GT:GQ:DP        0|0:83:28       1|0:100:21      0|1:100:64
+5      145638158       .       A       G       .       PASS    AA=A;DP=116     GT:GQ:DP        0|0:83:28       1|0:100:21      0|1:100:66
+5      38738622        .       C       T       .       PASS    AA=c;DP=112     GT:GQ:DP        0|0:83:28       1|0:100:21      0|1:100:66
+7      153716943       rs2052218       C       G       .       PASS    AA=G;DP=124     GT:GQ:DP        0|0:83:28       1|0:100:21      0|1:100:76
+13     29835473        .       C       T       .       PASS    AA=C;DP=134     GT:GQ:DP        0|0:83:28       1|0:100:21      0|1:100:85
+5      173481909       rs60651098      A       T       .       PASS    AA=A;DP=102     GT:GQ:DP        0|0:83:28       1|0:100:21      0|1:78:54
+1      59005085        .       C       A       .       PASS    AA=C;DP=109     GT:GQ:DP        0|0:83:28       1|0:100:22      0|1:100:58
+9      89513965        .       G       A       .       PASS    AA=A;DP=120     GT:GQ:DP        0|0:83:28       1|0:100:22      0|1:100:71
+13     26415467        .       C       T       .       PASS    AA=C;DP=134     GT:GQ:DP        0|0:83:28       1|0:100:22      0|1:100:85
+2      36212838        rs1397445       A       C       .       PASS    AA=C;DP=97      GT:GQ:DP        0|0:83:28       1|0:100:23      0|1:100:36
+21     23725781        rs9983472       G       T       .       PASS    AA=T;DP=116     GT:GQ:DP        0|0:83:28       1|0:100:23      0|1:100:66
+13     103386325       rs35188340      C       A       .       PASS    AA=C;DP=117     GT:GQ:DP        0|0:83:28       1|0:100:23      0|1:100:67
+22     20785390        rs5756852       G       C       .       PASS    AA=g;DP=118     GT:GQ:DP        0|0:83:28       1|0:100:23      0|1:100:67
+2      116385476       rs10208432      C       T       .       PASS    AA=C;DP=121     GT:GQ:DP        0|0:83:28       1|0:100:23      0|1:100:69
+7      30809707        .       A       C       .       PASS    AA=A;DP=104     GT:GQ:DP        0|0:83:28       1|0:100:24      0|1:100:52
+15     21324027        rs8034585       G       A       .       PASS    AA=g;DP=110     GT:GQ:DP        0|0:83:28       1|0:100:24      0|1:100:55
+12     116895532       .       G       A       .       PASS    AA=G;DP=142     GT:GQ:DP        0|0:83:28       1|0:100:25      0|1:100:48
+2      132980151       rs4954335       A       G       .       PASS    AA=A;DP=105     GT:GQ:DP        0|0:83:28       1|0:100:25      0|1:100:51
+2      56119317        rs6753577       A       G       .       PASS    AA=A;DP=109     GT:GQ:DP        0|0:83:28       1|0:100:25      0|1:100:57
+5      68260458        .       C       T       .       PASS    AA=C;DP=141     GT:GQ:DP        0|0:83:28       1|0:100:25      0|1:100:91
+10     132015627       rs60661805      C       T       .       PASS    AA=C;DP=133     GT:GQ:DP        0|0:83:28       1|0:100:27      0|1:100:78
+15     36460933        rs4523886       T       C       .       PASS    AA=T;DP=124     GT:GQ:DP        0|0:83:28       1|0:100:28      0|1:100:53
+4      169506573       rs606247        G       C       .       PASS    AA=G;DP=134     GT:GQ:DP        0|0:83:28       1|0:100:28      0|1:100:77
+9      118814728       rs61216558      G       C       .       PASS    AA=G;DP=132     GT:GQ:DP        0|0:83:28       1|0:100:28      0|1:100:78
+19     34266329        rs7247189       G       A       .       PASS    AA=G;DP=104     GT:GQ:DP        0|0:83:28       1|0:100:29      0|1:100:47
+6      78473791        rs61645362      T       C       .       PASS    AA=T;DP=129     GT:GQ:DP        0|0:83:28       1|0:100:29      0|1:100:76
+13     84857289        rs9575878       C       T       .       PASS    AA=C;DP=133     GT:GQ:DP        0|0:83:28       1|0:100:30      0|1:100:74
+3      28836304        rs28386911      A       G       .       PASS    AA=A;DP=122     GT:GQ:DP        0|0:83:28       1|0:100:31      0|1:100:64
+7      48336640        .       T       C       .       PASS    AA=C;DP=153     GT:GQ:DP        0|0:83:28       1|0:100:33      0|1:100:48
+5      82007098        .       G       T       .       PASS    AA=G;DP=116     GT:GQ:DP        0|0:83:28       1|0:100:33      0|1:100:54
+5      147452007       .       C       T       .       PASS    AA=C;DP=117     GT:GQ:DP        0|0:83:28       1|0:100:33      0|1:100:55
+14     52889542        rs58332236      G       T       .       PASS    AA=G;DP=103     GT:GQ:DP        0|0:83:28       1|0:26:21       0|1:100:52
+16     4637102 rs9927201       C       T       .       PASS    AA=C;DP=106     GT:GQ:DP        0|0:83:28       1|0:41:10       0|1:100:70
+16     84745128        rs2352934       G       A       .       PASS    AA=A;DP=126     GT:GQ:DP        0|0:83:28       1|0:41:22       0|1:100:60
+7      156956293       rs7785035       C       T       .       PASS    AA=c;DP=151     GT:GQ:DP        0|0:83:28       1|0:41:9        0|1:100:61
+20     56302849        rs6015243       C       G       .       PASS    AA=G;DP=91      GT:GQ:DP        0|0:83:28       1|0:48:19       0|1:100:44
+5      5900155 .       A       G       .       PASS    AA=a;DP=104     GT:GQ:DP        0|0:83:28       1|0:49:20       0|1:100:58
+20     40173490        .       G       A       .       PASS    AA=G;DP=123     GT:GQ:DP        0|0:83:28       1|0:50:20       0|1:100:60
+18     43513915        rs55709523      C       T       .       PASS    AA=C;DP=102     GT:GQ:DP        0|0:83:28       1|0:53:10       0|1:100:63
+3      102496288       .       A       G       .       PASS    AA=A;DP=147     GT:GQ:DP        0|0:83:28       1|0:56:21       0|1:100:92
+8      33490903        .       G       C       .       PASS    AA=G;DP=102     GT:GQ:DP        0|0:83:28       1|0:62:10       0|1:100:45
+16     76988341        rs4609864       G       A       .       PASS    AA=G;DP=122     GT:GQ:DP        0|0:83:28       1|0:63:16       0|1:100:59
+11     109951140       rs7129422       G       A       .       PASS    AA=G;DP=91      GT:GQ:DP        0|0:83:28       1|0:63:19       0|1:100:36
+15     23469801        .       C       T       .       PASS    AA=C;DP=117     GT:GQ:DP        0|0:83:28       1|0:67:17       0|1:100:73
+11     30318701        rs1222210       C       T       .       PASS    AA=C;DP=128     GT:GQ:DP        0|0:83:28       1|0:78:20       0|1:100:80
+12     127216921       rs7956687       T       A       .       PASS    AA=T;DP=140     GT:GQ:DP        0|0:83:28       1|0:80:27       0|1:100:84
+8      65355244        rs7000098       C       T       .       PASS    AA=T;DP=106     GT:GQ:DP        0|0:83:28       1|0:86:23       0|1:100:57
+13     22563654        rs9578540       T       C       .       PASS    AA=.;DP=118     GT:GQ:DP        0|0:83:28       1|0:91:23       0|1:100:69
+1      198248854       rs58446301      C       T       .       PASS    AA=C;DP=116     GT:GQ:DP        0|0:83:28       1|0:92:17       0|1:100:72
+8      47449350        .       G       A       .       PASS    AA=.;DP=104     GT:GQ:DP        0|0:83:28       1|0:92:19       0|1:100:58
+5      6783332 rs274699        A       C       .       PASS    AA=C;DP=121     GT:GQ:DP        0|0:83:28       1|0:92:23       0|1:100:70
+9      140131614       .       A       G       .       PASS    AA=A;DP=102     GT:GQ:DP        0|0:83:28       1|0:96:14       0|1:100:59
+3      143130781       .       C       T       .       PASS    AA=C;DP=108     GT:GQ:DP        0|0:83:28       1|0:97:18       0|1:100:51
+9      118961544       rs1334081       T       C       .       PASS    AA=T;DP=101     GT:GQ:DP        0|0:83:28       1|0:99:19       0|1:100:58
+18     7049852 rs9965008       T       A       .       PASS    AA=T;DP=144     GT:GQ:DP        0|0:83:28       1|0:99:24       0|1:100:89
+6      116786259       rs56819489      A       G       .       PASS    AA=A;DP=107     GT:GQ:DP        0|0:83:29       0|1:100:21      0|0:100:58
+10     102887295       rs3740499       C       T       .       PASS    AA=T;DP=121     GT:GQ:DP        0|0:83:29       0|1:100:24      0|0:100:68
+6      145183028       .       C       T       .       PASS    AA=C;DP=94      GT:GQ:DP        0|0:83:29       1|0:100:17      0|1:100:51
+5      7981328 rs7703296       A       G       .       PASS    AA=a;DP=98      GT:GQ:DP        0|0:83:29       1|0:100:17      0|1:100:52
+6      130305122       .       C       G       .       PASS    AA=C;DP=135     GT:GQ:DP        0|0:83:29       1|0:100:17      0|1:100:89
+2      81955875        rs13005847      G       A       .       PASS    AA=A;DP=112     GT:GQ:DP        0|0:83:29       1|0:100:18      0|1:100:63
+12     108932788       rs7311261       T       C       .       PASS    AA=T;DP=122     GT:GQ:DP        0|0:83:29       1|0:100:18      0|1:100:77
+1      243630273       rs539900        T       C       .       PASS    AA=T;DP=118;HM2;HM3     GT:GQ:DP        0|0:83:29       1|0:100:25      0|1:100:63
+2      181228811       rs1950029       G       C       .       PASS    AA=G;DP=124     GT:GQ:DP        0|0:83:29       1|0:100:26      0|1:100:68
+18     11458379        rs2198663       G       C       .       PASS    AA=G;DP=154     GT:GQ:DP        0|0:83:29       1|0:100:28      0|1:100:100
+8      16588334        .       A       G       .       PASS    AA=A;DP=139     GT:GQ:DP        0|0:83:29       1|0:100:29      0|1:100:81
+9      38217878        rs13292819      G       A       .       PASS    AA=G;DP=131     GT:GQ:DP        0|0:83:29       1|0:100:32      0|1:100:71
+7      102953537       rs9886100       G       A       .       PASS    AA=G;DP=125     GT:GQ:DP        0|0:83:29       1|0:34:21       0|1:100:38
+16     34734624        rs61734822      C       T       .       PASS    AA=.;DP=112     GT:GQ:DP        0|0:83:29       1|0:54:11       0|1:100:74
+14     91458062        rs17732602      C       A       .       PASS    AA=C;DP=99      GT:GQ:DP        0|0:83:29       1|0:72:15       0|1:100:56
+10     113686361       rs2111639       T       C       .       PASS    AA=C;DP=117     GT:GQ:DP        0|0:83:29       1|0:83:18       0|1:100:71
+12     113115938       rs56328470      G       A       .       PASS    AA=A;DP=129     GT:GQ:DP        0|0:83:29       1|0:84:18       0|1:100:82
+7      2087800 rs3800887       C       G       .       PASS    AA=G;DP=95      GT:GQ:DP        0|0:83:29       1|0:86:14       0|1:100:53
+10     53172901        .       T       C       .       PASS    AA=T;DP=127     GT:GQ:DP        0|0:83:29       1|0:88:29       0|1:100:70
+22     32981454        .       G       A       .       PASS    AA=G;DP=130     GT:GQ:DP        0|0:83:29       1|0:93:21       0|1:100:80
+9      90195549        rs12351962      C       T       .       PASS    AA=C;DP=112     GT:GQ:DP        0|0:83:29       1|0:96:14       0|1:100:73
+16     82916209        rs12596655      T       C       .       PASS    AA=T;DP=107     GT:GQ:DP        0|0:83:30       1|0:100:19      0|1:100:60
+18     25364912        .       C       T       .       PASS    AA=c;DP=114     GT:GQ:DP        0|0:83:30       1|0:100:21      0|1:100:65
+10     73263293        .       T       C       .       PASS    AA=T;DP=147     GT:GQ:DP        0|0:83:30       1|0:100:31      0|1:100:84
+5      52416680        rs3212627       A       T       .       PASS    AA=A;DP=126     GT:GQ:DP        0|0:83:30       1|0:100:35      0|1:100:65
+7      12289819        .       G       A       .       PASS    AA=G;DP=101     GT:GQ:DP        0|0:83:30       1|0:58:18       0|1:100:53
+19     12909357        .       T       A       .       PASS    AA=A;DP=91      GT:GQ:DP        0|0:83:30       1|0:70:9        0|1:100:41
+8      125935429       .       T       A       .       PASS    AA=T;DP=124     GT:GQ:DP        0|0:83:30       1|0:81:22       0|1:100:54
+4      115886754       .       C       A       .       PASS    AA=c;DP=109     GT:GQ:DP        0|0:83:30       1|0:89:16       0|1:100:63
+6      109896600       rs2273896       G       A       .       PASS    AA=G;DP=143     GT:GQ:DP        0|0:83:30       1|0:92:31       0|1:100:82
+7      136925946       .       C       G       .       PASS    AA=C;DP=152     GT:GQ:DP        0|0:83:31       0|1:100:27      0|0:100:40
+6      37086857        rs1724087       T       C       .       PASS    AA=C;DP=107     GT:GQ:DP        0|0:83:31       1|0:100:17      0|1:100:59
+2      222289170       .       G       A       .       PASS    AA=G;DP=122     GT:GQ:DP        0|0:83:31       1|0:100:23      0|1:100:69
+9      94565493        rs1010823       A       G       .       PASS    AA=G;DP=135     GT:GQ:DP        0|0:83:31       1|0:35:27       0|1:100:79
+2      238489506       rs6725170       C       T       .       PASS    AA=C;DP=111     GT:GQ:DP        0|0:83:31       1|0:67:14       0|1:100:67
+5      76283289        .       T       C       .       PASS    AA=T;DP=129     GT:GQ:DP        0|0:83:32       0|1:100:21      0|0:100:79
+6      3510139 .       C       T       .       PASS    AA=C;DP=157     GT:GQ:DP        0|0:83:32       0|1:100:24      0|0:100:52
+11     32127711        .       C       T       .       PASS    AA=C;DP=167     GT:GQ:DP        0|0:83:32       0|1:100:27      0|0:100:51
+7      146177981       rs6955130       C       T       .       PASS    AA=C;DP=119     GT:GQ:DP        0|0:83:33       0|1:100:29      0|0:100:58
+2      47564292        .       C       T       .       PASS    AA=C;DP=114     GT:GQ:DP        0|0:83:33       1|0:100:17      0|1:100:67
+10     120926691       rs3740562       G       A       .       PASS    AA=G;DP=121     GT:GQ:DP        0|0:83:33       1|0:100:19      0|1:100:69
+1      101029330       rs9919341       T       C       .       PASS    AA=T;DP=125;HM2 GT:GQ:DP        0|0:83:33       1|0:100:19      0|1:100:71
+2      179419218       rs726215        T       G       .       PASS    AA=T;DP=142     GT:GQ:DP        0|0:83:33       1|0:100:28      0|1:100:41
+20     16605558        rs6044220       C       T       .       PASS    AA=C;DP=132     GT:GQ:DP        0|0:83:33       1|0:100:29      0|1:100:70
+8      105562833       .       C       T       .       PASS    AA=C;DP=125     GT:GQ:DP        0|0:83:33       1|0:79:21       0|1:100:73
+3      71406547        rs1464497       G       A       .       PASS    AA=G;DP=135     GT:GQ:DP        0|0:83:33       1|0:87:23       0|1:100:82
+1      165244494       rs60188821      T       C       .       PASS    AA=T;DP=133     GT:GQ:DP        0|0:83:34       1|1:58:22       0|1:100:31
+13     22461192        rs60679756      T       C       .       PASS    AA=.;DP=150     GT:GQ:DP        0|0:83:34       1|1:72:33       0|1:100:45
+13     112102184       rs10161904      A       T       .       PASS    AA=A;DP=135     GT:GQ:DP        0|0:83:35       1|0:100:27      0|1:100:73
+17     64184833        rs2278445       T       G       .       PASS    AA=G;DP=122     GT:GQ:DP        0|0:83:35       1|1:37:14       0|1:100:73
+4      62976751        .       C       T       .       PASS    AA=C;DP=124     GT:GQ:DP        0|0:83:36       0|1:100:29      0|0:100:59
+20     1915772 rs1418039       A       G       .       PASS    AA=A;DP=128     GT:GQ:DP        0|0:83:36       1|0:85:15       0|1:100:77
+20     32063904        rs10084516      G       C       .       PASS    AA=C;DP=113     GT:GQ:DP        0|0:83:36       1|1:30:21       0|1:100:56
+10     97669929        rs36103691      A       G       .       PASS    AA=A;DP=145     GT:GQ:DP        0|0:83:37       0|1:100:25      0|0:100:82
+16     67154010        rs1728791       T       C       .       PASS    AA=T;DP=118     GT:GQ:DP        0|0:83:39       1|0:100:16      0|1:100:63
+8      57120374        rs57093892      T       C       .       PASS    AA=t;DP=122     GT:GQ:DP        0|0:83:39       1|0:100:16      0|1:100:68
+2      204768694       .       G       C       .       PASS    AA=G;DP=149     GT:GQ:DP        0|0:83:39       1|0:100:20      0|1:100:90
+9      17798106        rs35728688      C       G       .       PASS    AA=C;DP=122     GT:GQ:DP        0|0:83:39       1|0:100:25      0|1:100:60
+8      30913636        rs10441479      C       A       .       PASS    AA=C;DP=150     GT:GQ:DP        0|0:83:39       1|0:100:25      0|1:100:87
+13     98730405        .       G       T       .       PASS    AA=G;DP=149     GT:GQ:DP        0|0:83:39       1|0:100:28      0|1:100:83
+5      3084483 rs61510687      A       G       .       PASS    AA=G;DP=132     GT:GQ:DP        0|0:83:39       1|0:57:18       0|1:100:75
+8      142631600       .       T       C       .       PASS    AA=t;DP=147     GT:GQ:DP        0|0:83:39       1|0:97:23       0|1:100:87
+2      176686302       rs7609360       C       T       .       PASS    AA=C;DP=142     GT:GQ:DP        0|0:84:28       1|0:84:27       0|1:100:86
+3      147877582       rs10804716      C       T       .       PASS    AA=T;DP=142     GT:GQ:DP        0|0:84:28       1|1:100:36      0|1:100:80
+3      163926224       .       G       A       .       PASS    AA=C;DP=130     GT:GQ:DP        0|0:84:28       1|1:11:16       0|1:100:87
+5      180606035       rs1279734       A       C       .       PASS    AA=C;DP=66      GT:GQ:DP        0|0:84:28       1|1:13:6        0|1:100:26
+19     18715321        .       C       A       .       PASS    AA=C;DP=86      GT:GQ:DP        0|0:84:28       1|1:22:9        0|1:100:49
+15     22598717        .       C       T       .       PASS    AA=c;DP=104     GT:GQ:DP        0|0:84:28       1|1:22:9        0|1:100:66
+8      112669889       rs12679274      C       T       .       PASS    AA=c;DP=128     GT:GQ:DP        0|0:84:28       1|1:24:28       0|1:100:71
+6      54225526        rs10948803      A       T       .       PASS    AA=T;DP=86      GT:GQ:DP        0|0:84:28       1|1:25:10       0|1:100:37
+1      235815011       rs12140714      C       A       .       PASS    AA=A;DP=123     GT:GQ:DP        0|0:84:28       1|1:26:20       0|1:100:71
+9      136657119       rs10776895      T       C       .       PASS    AA=t;DP=92      GT:GQ:DP        0|0:84:28       1|1:28:11       0|1:100:50
+8      17949949        .       T       G       .       PASS    AA=T;DP=91      GT:GQ:DP        0|0:84:28       1|1:28:12       0|1:100:39
+1      17549656        rs11203369      A       G       .       PASS    AA=-;DP=120     GT:GQ:DP        0|0:84:28       1|1:33:14       0|1:100:79
+7      80614874        rs327664        G       C       .       PASS    AA=G;DP=93      GT:GQ:DP        0|0:84:28       1|1:34:14       0|1:100:50
+10     80775850        rs4980063       A       T       .       PASS    AA=A;DP=133     GT:GQ:DP        0|0:84:28       1|1:34:14       0|1:100:55
+14     106311825       rs726998        G       T       .       PASS    AA=.;DP=111     GT:GQ:DP        0|0:84:28       1|1:39:21       0|1:100:65
+18     60420051        rs2959447       A       C       .       PASS    AA=C;DP=126     GT:GQ:DP        0|0:84:28       1|1:39:30       0|1:100:68
+7      45168332        rs3779396       T       C       .       PASS    AA=C;DP=120     GT:GQ:DP        0|0:84:28       1|1:40:15       0|1:100:76
+14     59064159        rs11628241      T       C       .       PASS    AA=T;DP=112     GT:GQ:DP        0|0:84:28       1|1:40:16       0|1:100:48
+8      37767164        rs7005432       T       G       .       PASS    AA=T;DP=123     GT:GQ:DP        0|0:84:28       1|1:40:22       0|1:100:77
+1      88197614        rs6428596       C       G       .       PASS    AA=G;DP=110     GT:GQ:DP        0|0:84:28       1|1:43:16       0|1:100:70
+5      10960312        rs4702762       A       T       .       PASS    AA=A;DP=120     GT:GQ:DP        0|0:84:28       1|1:43:17       0|1:100:36
+7      93469132        rs10257333      A       C       .       PASS    AA=A;DP=119     GT:GQ:DP        0|0:84:28       1|1:49:18       0|1:100:72
+4      119336981       rs4833566       G       T       .       PASS    AA=T;DP=120     GT:GQ:DP        0|0:84:28       1|1:49:23       0|1:100:70
+20     9507150 rs6039510       C       A       .       PASS    AA=C;DP=126     GT:GQ:DP        0|0:84:28       1|1:50:30       0|1:100:69
+1      158078366       rs2494494       G       A       .       PASS    AA=G;DP=126     GT:GQ:DP        0|0:84:28       1|1:52:20       0|1:100:79
+11     85110068        rs290195        A       G       .       PASS    AA=A;DP=102     GT:GQ:DP        0|0:84:28       1|1:55:20       0|1:100:54
+10     94053227        rs7100640       A       G       .       PASS    AA=A;DP=113     GT:GQ:DP        0|0:84:28       1|1:55:20       0|1:100:66
+3      48846668        rs9755490       A       C       .       PASS    AA=C;DP=130     GT:GQ:DP        0|0:84:28       1|1:55:21       0|1:100:81
+8      94177629        rs12678196      C       G       .       PASS    AA=C;DP=125     GT:GQ:DP        0|0:84:28       1|1:55:22       0|1:100:71
+20     25469074        .       G       A       .       PASS    AA=G;DP=147     GT:GQ:DP        0|0:84:28       1|1:56:28       0|1:100:92
+9      74555746        rs10481772      T       C       .       PASS    AA=T;DP=124     GT:GQ:DP        0|0:84:28       1|1:58:21       0|1:100:32
+6      136441276       .       A       G       .       PASS    AA=A;DP=149     GT:GQ:DP        0|0:84:28       1|1:58:23       0|1:100:68
+17     12016088        rs7209492       A       G       .       PASS    AA=A;DP=110     GT:GQ:DP        0|0:84:28       1|1:58:24       0|1:100:59
+16     52394690        .       C       T       .       PASS    AA=C;DP=134     GT:GQ:DP        0|0:84:28       1|1:61:22       0|1:100:37
+8      29165046        rs12682460      G       A       .       PASS    AA=G;DP=118     GT:GQ:DP        0|0:84:28       1|1:64:23       0|1:100:65
+2      214952060       rs4673821       T       C       .       PASS    AA=T;DP=135     GT:GQ:DP        0|0:84:28       1|1:64:23       0|1:100:82
+12     59816927        rs7972022       A       G       .       PASS    AA=A;DP=116     GT:GQ:DP        0|0:84:28       1|1:67:26       0|1:100:63
+14     95371975        rs1951294       G       T       .       PASS    AA=G;DP=146     GT:GQ:DP        0|0:84:28       1|1:69:34       0|1:100:42
+1      58473879        rs4912313       T       G       .       PASS    AA=G;DP=162     GT:GQ:DP        0|0:84:28       1|1:70:26       0|1:100:44
+10     94775322        rs835263        G       A       .       PASS    AA=G;DP=121     GT:GQ:DP        0|0:84:28       1|1:74:28       0|1:100:66
+12     77707184        .       T       G       .       PASS    AA=T;DP=117     GT:GQ:DP        0|0:84:28       1|1:76:27       0|1:100:60
+3      46308410        rs11708582      C       T       .       PASS    AA=T;DP=108     GT:GQ:DP        0|0:84:28       1|1:79:29       0|1:100:51
+5      162910861       rs17061883      G       A       .       PASS    AA=g;DP=128     GT:GQ:DP        0|0:84:28       1|1:79:29       0|1:100:75
+7      1265427 rs6463573       A       G       .       PASS    AA=A;DP=90      GT:GQ:DP        0|0:84:28       1|1:8:18        0|1:100:31
+3      27898420        rs6805319       C       T       .       PASS    AA=C;DP=125     GT:GQ:DP        0|0:84:29       1|1:100:35      0|1:100:63
+2      22284451        rs1554267       T       A       .       PASS    AA=T;DP=146     GT:GQ:DP        0|0:84:29       1|1:100:38      0|1:100:80
+1      211117250       rs11120054      A       G       .       PASS    AA=a;DP=97      GT:GQ:DP        0|0:84:29       1|1:13:18       0|1:100:51
+3      135047547       .       A       G       .       PASS    AA=A;DP=106     GT:GQ:DP        0|0:84:29       1|1:16:15       0|1:100:62
+1      151235368       rs9919333       G       T       .       PASS    AA=T;DP=106;HM2 GT:GQ:DP        0|0:84:29       1|1:19:19       0|1:100:55
+2      98008217        rs11888110      T       C       .       PASS    AA=T;DP=106     GT:GQ:DP        0|0:84:29       1|1:25:19       0|1:100:56
+9      76968933        .       C       T       .       PASS    AA=C;DP=88      GT:GQ:DP        0|0:84:29       1|1:31:13       0|1:100:46
+7      116084132       rs437   C       T       .       PASS    AA=C;DP=121     GT:GQ:DP        0|0:84:29       1|1:38:24       0|1:100:71
+2      127404669       .       T       C       .       PASS    AA=T;DP=96      GT:GQ:DP        0|0:84:29       1|1:43:16       0|1:100:36
+19     2147783 rs2269882       A       G       .       PASS    AA=A;DP=120     GT:GQ:DP        0|0:84:29       1|1:43:16       0|1:100:72
+3      189462026       rs9838653       C       T       .       PASS    AA=C;DP=106     GT:GQ:DP        0|0:84:29       1|1:43:17       0|1:100:59
+17     16269680        rs8079010       T       C       .       PASS    AA=C;DP=119     GT:GQ:DP        0|0:84:29       1|1:43:18       0|1:100:73
+1      111638889       rs11578207      G       C       .       PASS    AA=G;DP=104     GT:GQ:DP        0|0:84:29       1|1:52:19       0|1:100:59
+14     40151380        rs10142239      A       G       .       PASS    AA=A;DP=109     GT:GQ:DP        0|0:84:29       1|1:52:21       0|1:100:59
+3      104314637       rs1304149       G       A       .       PASS    AA=g;DP=121     GT:GQ:DP        0|0:84:29       1|1:55:20       0|1:100:75
+14     33229319        rs2149836       A       G       .       PASS    AA=A;DP=143     GT:GQ:DP        0|0:84:29       1|1:55:20       0|1:100:96
+18     74748829        rs8084836       T       C       .       PASS    AA=t;DP=122     GT:GQ:DP        0|0:84:29       1|1:55:21       0|1:100:74
+20     23942292        rs6049325       G       A       .       PASS    AA=G;DP=143     GT:GQ:DP        0|0:84:29       1|1:55:22       0|1:100:86
+17     7934099 rs58630184      A       G       .       PASS    AA=G;DP=130     GT:GQ:DP        0|0:84:29       1|1:58:21       0|1:100:83
+10     32086871        rs2797135       G       C       .       PASS    AA=C;DP=118     GT:GQ:DP        0|0:84:29       1|1:58:22       0|1:100:67
+7      142051253       rs12703486      A       G       .       PASS    AA=a;DP=104     GT:GQ:DP        0|0:84:29       1|1:61:23       0|1:100:37
+4      122672467       .       T       C       .       PASS    AA=T;DP=99      GT:GQ:DP        0|0:84:29       1|1:61:23       0|1:100:47
+4      122183025       rs1355395       T       A       .       PASS    AA=A;DP=115     GT:GQ:DP        0|0:84:29       1|1:79:29       0|1:100:59
+5      17246633        rs585991        C       T       .       PASS    AA=C;DP=145     GT:GQ:DP        0|0:84:29       1|1:82:29       0|1:100:90
+21     30431414        rs2832632       C       G       .       PASS    AA=G;DP=141     GT:GQ:DP        0|0:84:29       1|1:85:30       0|1:100:37
+12     32802198        rs3809232       A       G       .       PASS    AA=A;DP=133     GT:GQ:DP        0|0:84:29       1|1:88:34       0|1:100:70
+2      218896687       rs10206448      T       G       .       PASS    AA=G;DP=117     GT:GQ:DP        0|0:84:30       1|0:100:21      0|1:100:68
+3      40672301        rs7646270       A       G       .       PASS    AA=G;DP=115     GT:GQ:DP        0|0:84:30       1|1:52:19       0|1:100:63
+11     2306898 rs2651802       A       G       .       PASS    AA=G;DP=133     GT:GQ:DP        0|0:84:30       1|1:67:26       0|1:100:81
+5      151992988       rs9324734       G       A       .       PASS    AA=G;DP=135     GT:GQ:DP        0|0:84:30       1|1:70:25       0|1:100:77
+1      56343819        rs10158150      A       G       .       PASS    AA=G;DP=144;HM2 GT:GQ:DP        0|0:84:30       1|1:91:33       0|1:100:68
+3      167865592       .       G       A       .       PASS    AA=G;DP=105     GT:GQ:DP        0|0:84:31       0|1:100:17      0|0:100:55
+8      73142841        .       G       A       .       PASS    AA=A;DP=169     GT:GQ:DP        0|0:84:32       0|1:100:37      0|0:100:101
+19     8469284 .       G       T       .       PASS    AA=G;DP=98      GT:GQ:DP        0|0:84:32       1|0:66:6        0|1:100:57
+17     9042221 rs11654554      T       G       .       PASS    AA=T;DP=156     GT:GQ:DP        0|0:84:34       0|1:100:23      0|0:100:100
+3      9283272 rs2668348       G       A       .       PASS    AA=G;DP=137     GT:GQ:DP        0|0:84:34       1|0:100:20      0|1:100:82
+3      114287839       rs10934215      C       T       .       PASS    AA=C;DP=127     GT:GQ:DP        0|0:84:34       1|0:100:22      0|1:100:33
+11     100939189       rs7115437       G       T       .       PASS    AA=A;DP=127     GT:GQ:DP        0|0:84:34       1|0:100:22      0|1:100:75
+7      21696185        .       C       T       .       PASS    AA=C;DP=126     GT:GQ:DP        0|0:84:34       1|0:100:23      0|1:100:71
+6      1394120 rs2745636       G       T       .       PASS    AA=G;DP=127     GT:GQ:DP        0|0:84:34       1|0:100:26      0|1:100:67
+4      152034913       .       G       A       .       PASS    AA=G;DP=97      GT:GQ:DP        0|0:84:34       1|0:59:22       0|1:100:40
+3      10776042        rs3900079       G       T       .       PASS    AA=T;DP=131     GT:GQ:DP        0|0:84:35       1|0:100:28      0|1:100:66
+18     10697117        rs2155845       G       A       .       PASS    AA=G;DP=115     GT:GQ:DP        0|0:84:36       1|0:100:16      0|1:100:64
+3      12966383        rs2569997       T       C       .       PASS    AA=T;DP=131     GT:GQ:DP        0|0:84:36       1|1:26:16       0|1:100:71
+15     69024612        rs16955025      A       G       .       PASS    AA=A;DP=156     GT:GQ:DP        0|0:84:38       0|1:100:19      0|0:100:62
+8      6365605 rs1960240       G       A       .       PASS    AA=G;DP=131     GT:GQ:DP        0|0:84:38       0|1:100:20      0|0:100:69
+10     77748518        rs2758968       T       C       .       PASS    AA=T;DP=168     GT:GQ:DP        0|0:84:38       0|1:100:30      0|0:100:46
+8      106001707       rs1160281       A       G       .       PASS    AA=G;DP=159     GT:GQ:DP        0|0:84:38       0|1:100:30      0|0:100:77
+10     113168221       rs7092897       G       A       .       PASS    AA=A;DP=150     GT:GQ:DP        0|0:84:40       1|1:79:28       0|1:100:79
+9      16317781        .       A       T       .       PASS    AA=T;DP=141     GT:GQ:DP        0|0:84:41       1|0:53:24       0|1:100:75
+3      11199497        rs6442236       G       T       .       PASS    AA=G;DP=135     GT:GQ:DP        0|0:85:28       0|1:100:24      0|0:100:83
+9      88953098        rs13295659      T       C       .       PASS    AA=T;DP=97      GT:GQ:DP        0|0:85:28       1|0:5:15        0|1:100:55
+11     2485562 rs3819511       T       C       .       PASS    AA=T;DP=123     GT:GQ:DP        0|0:85:29       0|1:100:17      0|0:100:78
+5      34712037        rs256294        C       T       .       PASS    AA=T;DP=121     GT:GQ:DP        0|0:85:29       1|0:100:26      0|1:100:63
+12     104742498       rs2080756       G       T       .       PASS    AA=T;DP=96      GT:GQ:DP        0|0:85:29       1|0:5:12        0|1:100:54
+2      131296637       .       A       C       .       PASS    AA=A;DP=114     GT:GQ:DP        0|0:85:29       1|0:92:13       0|1:100:72
+15     21701560        rs11854783      T       C       .       PASS    AA=.;DP=115     GT:GQ:DP        0|0:85:29       1|0:94:12       0|1:100:74
+2      3319101 rs1111657       G       A       .       PASS    AA=g;DP=133     GT:GQ:DP        0|0:85:30       1|0:86:16       0|1:100:92
+16     355136  rs2363754       A       G       .       PASS    AA=G;DP=121     GT:GQ:DP        0|0:85:32       1|0:100:17      0|1:100:73
+6      4124397 rs9405708       T       C       .       PASS    AA=T;DP=147     GT:GQ:DP        0|0:85:32       1|0:100:29      0|1:100:87
+8      77921666        .       G       T       .       PASS    AA=G;DP=113     GT:GQ:DP        0|0:85:33       0|1:100:24      0|0:100:58
+12     87507125        .       G       A       .       PASS    AA=G;DP=144     GT:GQ:DP        0|0:85:33       1|0:85:27       0|1:100:76
+1      223552096       rs12734615      A       G       .       PASS    AA=A;DP=136     GT:GQ:DP        0|0:85:34       0|1:100:24      0|0:100:74
+11     112305991       rs59977120      A       T       .       PASS    AA=A;DP=141     GT:GQ:DP        0|0:85:34       1|0:100:20      0|1:100:86
+20     16744481        .       C       T       .       PASS    AA=C;DP=127     GT:GQ:DP        0|0:85:36       1|0:100:21      0|1:100:71
+2      73331355        .       A       T       .       PASS    AA=a;DP=129     GT:GQ:DP        0|0:85:36       1|0:100:21      0|1:100:73
+17     68748573        rs12453902      A       G       .       PASS    AA=G;DP=129     GT:GQ:DP        0|0:85:36       1|1:76:28       0|1:100:66
+9      36951472        rs12552580      A       C       .       PASS    AA=C;DP=169     GT:GQ:DP        0|0:85:39       0|1:100:30      0|0:100:101
+4      78576674        .       G       A       .       PASS    AA=g;DP=84      GT:GQ:DP        0|0:86:27       0|1:100:13      0|0:100:44
+13     20779975        rs4769158       T       C       .       PASS    AA=t;DP=115     GT:GQ:DP        0|0:86:27       0|1:100:13      0|0:100:75
+3      174885507       rs60158728      C       T       .       PASS    AA=C;DP=125     GT:GQ:DP        0|0:86:27       0|1:100:13      0|0:100:84
+9      21279445        .       A       G       .       PASS    AA=N;DP=121     GT:GQ:DP        0|0:86:27       0|1:100:13      0|0:87:29
+10     78296389        rs4980111       T       C       .       PASS    AA=T;DP=87      GT:GQ:DP        0|0:86:27       0|1:100:14      0|0:100:43
+13     25191963        .       G       A       .       PASS    AA=G;DP=90      GT:GQ:DP        0|0:86:27       0|1:100:14      0|0:100:49
+6      149799239       .       G       T       .       PASS    AA=G;DP=132     GT:GQ:DP        0|0:86:27       0|1:100:14      0|0:100:76
+14     87509693        .       C       A       .       PASS    AA=C;DP=118     GT:GQ:DP        0|0:86:27       0|1:100:14      0|0:100:81
+12     358849  .       A       G       .       PASS    AA=A;DP=114     GT:GQ:DP        0|0:86:27       0|1:100:14      0|0:99:33
+5      39181010        rs6877536       T       G       .       PASS    AA=T;DP=99      GT:GQ:DP        0|0:86:27       0|1:100:15      0|0:100:54
+4      78968001        rs1996740       A       G       .       PASS    AA=A;DP=112     GT:GQ:DP        0|0:86:27       0|1:100:15      0|0:100:71
+2      21101270        .       G       A       .       PASS    AA=G;DP=90      GT:GQ:DP        0|0:86:27       0|1:100:16      0|0:100:40
+3      90101836        .       C       A       .       PASS    AA=C;DP=93      GT:GQ:DP        0|0:86:27       0|1:100:16      0|0:100:48
+4      100118216       rs7356525       G       A       .       PASS    AA=G;DP=94      GT:GQ:DP        0|0:86:27       0|1:100:16      0|0:100:50
+17     9423431 .       G       T       .       PASS    AA=T;DP=104     GT:GQ:DP        0|0:86:27       0|1:100:16      0|0:100:64
+10     42891264        .       G       A       .       PASS    AA=G;DP=115     GT:GQ:DP        0|0:86:27       0|1:100:16      0|0:100:72
+15     79076579        rs12593120      G       A       .       PASS    AA=G;DP=98      GT:GQ:DP        0|0:86:27       0|1:100:17      0|0:100:53
+12     96228923        rs35653812      G       A       .       PASS    AA=A;DP=98      GT:GQ:DP        0|0:86:27       0|1:100:17      0|0:100:55
+9      78053326        .       G       A       .       PASS    AA=A;DP=102     GT:GQ:DP        0|0:86:27       0|1:100:17      0|0:100:56
+5      176527683       .       G       A       .       PASS    AA=g;DP=107     GT:GQ:DP        0|0:86:27       0|1:100:17      0|0:100:66
+10     128586937       .       G       A       .       PASS    AA=G;DP=108     GT:GQ:DP        0|0:86:27       0|1:100:17      0|0:100:68
+5      116451814       rs5007062       A       G       .       PASS    AA=A;DP=115     GT:GQ:DP        0|0:86:27       0|1:100:17      0|0:100:70
+18     2258254 rs7228100       C       A       .       PASS    AA=C;DP=112     GT:GQ:DP        0|0:86:27       0|1:100:17      0|0:100:73
+3      107842075       rs7636315       T       C       .       PASS    AA=C;DP=123     GT:GQ:DP        0|0:86:27       0|1:100:17      0|0:100:80
+2      240026443       rs56319647      C       T       .       PASS    AA=T;DP=132     GT:GQ:DP        0|0:86:27       0|1:100:17      0|0:100:87
+2      235695483       rs4350698       C       T       .       PASS    AA=C;DP=114     GT:GQ:DP        0|0:86:27       0|1:100:17      0|0:87:29
+9      28432868        .       A       G       .       PASS    AA=A;DP=103     GT:GQ:DP        0|0:86:27       0|1:100:18      0|0:100:52
+15     81989374        .       C       T       .       PASS    AA=c;DP=99      GT:GQ:DP        0|0:86:27       0|1:100:18      0|0:100:54
+4      90340796        .       G       A       .       PASS    AA=g;DP=105     GT:GQ:DP        0|0:86:27       0|1:100:18      0|0:100:60
+13     108026961       rs8000804       T       A       .       PASS    AA=A;DP=108     GT:GQ:DP        0|0:86:27       0|1:100:18      0|0:100:62
+11     16046131        .       G       A       .       PASS    AA=G;DP=121     GT:GQ:DP        0|0:86:27       0|1:100:18      0|0:100:77
+6      155172771       .       T       C       .       PASS    AA=T;DP=128     GT:GQ:DP        0|0:86:27       0|1:100:18      0|0:100:77
+15     23214132        rs12899875      A       T       .       PASS    AA=A;DP=79      GT:GQ:DP        0|0:86:27       0|1:100:18      0|0:66:22
+9      30784513        rs61586112      A       G       .       PASS    AA=A;DP=98      GT:GQ:DP        0|0:86:27       0|1:100:19      0|0:100:35
+2      217779039       .       A       C       .       PASS    AA=A;DP=118     GT:GQ:DP        0|0:86:27       0|1:100:19      0|0:100:72
+8      4661676 .       T       G       .       PASS    AA=T;DP=123     GT:GQ:DP        0|0:86:27       0|1:100:19      0|0:100:78
+9      103917234       .       A       G       .       PASS    AA=A;DP=122     GT:GQ:DP        0|0:86:27       0|1:100:19      0|0:100:78
+4      47284653        rs10021442      A       G       .       PASS    AA=G;DP=125     GT:GQ:DP        0|0:86:27       0|1:100:19      0|0:100:81
+2      129103495       .       C       G       .       PASS    AA=C;DP=135     GT:GQ:DP        0|0:86:27       0|1:100:19      0|0:100:88
+8      64086252        .       T       C       .       PASS    AA=T;DP=130     GT:GQ:DP        0|0:86:27       0|1:100:20      0|0:100:39
+1      87334150        .       C       T       .       PASS    AA=C;DP=88      GT:GQ:DP        0|0:86:27       0|1:100:20      0|0:100:41
+21     37283018        .       C       T       .       PASS    AA=C;DP=141     GT:GQ:DP        0|0:86:27       0|1:100:20      0|0:100:49
+12     32023703        .       C       G       .       PASS    AA=C;DP=143     GT:GQ:DP        0|0:86:27       0|1:100:20      0|0:100:53
+1      81103273        .       G       A       .       PASS    AA=G;DP=110     GT:GQ:DP        0|0:86:27       0|1:100:20      0|0:100:62
+3      115309315       .       G       A       .       PASS    AA=G;DP=113     GT:GQ:DP        0|0:86:27       0|1:100:20      0|0:100:66
+8      4432000 rs4875364       T       C       .       PASS    AA=T;DP=116     GT:GQ:DP        0|0:86:27       0|1:100:20      0|0:100:71
+1      188556773       .       T       A       .       PASS    AA=T;DP=95      GT:GQ:DP        0|0:86:27       0|1:100:21      0|0:100:45
+2      157402786       rs7569658       A       G       .       PASS    AA=A;DP=141     GT:GQ:DP        0|0:86:27       0|1:100:21      0|0:100:48
+11     77115707        rs4344516       A       G       .       PASS    AA=A;DP=99      GT:GQ:DP        0|0:86:27       0|1:100:21      0|0:100:51
+2      137179936       rs10180971      G       C       .       PASS    AA=G;DP=147     GT:GQ:DP        0|0:86:27       0|1:100:21      0|0:100:56
+4      30498916        rs11732590      A       G       .       PASS    AA=A;DP=102     GT:GQ:DP        0|0:86:27       0|1:100:21      0|0:100:57
+13     72105427        rs9600000       G       A       .       PASS    AA=A;DP=115     GT:GQ:DP        0|0:86:27       0|1:100:21      0|0:100:68
+1      226433117       .       C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        0|0:86:27       0|1:100:21      0|0:100:71
+14     26705459        .       A       G       .       PASS    AA=G;DP=120     GT:GQ:DP        0|0:86:27       0|1:100:21      0|0:100:71
+2      64032565        .       T       C       .       PASS    AA=T;DP=120     GT:GQ:DP        0|0:86:27       0|1:100:21      0|0:100:73
+6      28959804        .       A       G       .       PASS    AA=A;DP=126     GT:GQ:DP        0|0:86:27       0|1:100:21      0|0:99:35
+3      188803706       .       G       C       .       PASS    AA=G;DP=134     GT:GQ:DP        0|0:86:27       0|1:100:22      0|0:100:44
+4      160102231       rs7673678       A       G       .       PASS    AA=A;DP=98      GT:GQ:DP        0|0:86:27       0|1:100:22      0|0:100:50
+7      144694051       .       A       G       .       PASS    AA=A;DP=104     GT:GQ:DP        0|0:86:27       0|1:100:22      0|0:100:56
+21     30526758        rs11700787      A       C       .       PASS    AA=A;DP=105     GT:GQ:DP        0|0:86:27       0|1:100:22      0|0:100:57
+2      58960967        .       G       T       .       PASS    AA=G;DP=117     GT:GQ:DP        0|0:86:27       0|1:100:22      0|0:100:69
+6      39357047        .       C       A       .       PASS    AA=C;DP=123     GT:GQ:DP        0|0:86:27       0|1:100:22      0|0:100:74
+11     36993859        rs7480809       G       T       .       PASS    AA=G;DP=120     GT:GQ:DP        0|0:86:27       0|1:100:22      0|0:100:75
+1      163184343       .       A       G       .       PASS    AA=A;DP=126     GT:GQ:DP        0|0:86:27       0|1:100:22      0|0:100:77
+4      185736601       .       C       T       .       PASS    AA=C;DP=123     GT:GQ:DP        0|0:86:27       0|1:100:22      0|0:100:77
+7      105085824       .       G       A       .       PASS    AA=g;DP=130     GT:GQ:DP        0|0:86:27       0|1:100:22      0|0:100:80
+14     43039029        .       A       T       .       PASS    AA=A;DP=136     GT:GQ:DP        0|0:86:27       0|1:100:22      0|0:100:87
+3      114882206       .       G       A       .       PASS    AA=g;DP=99      GT:GQ:DP        0|0:86:27       0|1:100:22      0|0:85:40
+8      136117785       .       A       G       .       PASS    AA=A;DP=133     GT:GQ:DP        0|0:86:27       0|1:100:23      0|0:100:38
+20     50848719        .       G       T       .       PASS    AA=G;DP=141     GT:GQ:DP        0|0:86:27       0|1:100:23      0|0:100:48
+7      130089040       .       T       G       .       PASS    AA=T;DP=107     GT:GQ:DP        0|0:86:27       0|1:100:23      0|0:100:57
+2      114923235       rs62172125      C       A       .       PASS    AA=C;DP=109     GT:GQ:DP        0|0:86:27       0|1:100:23      0|0:100:59
+12     73851218        .       G       A       .       PASS    AA=G;DP=118     GT:GQ:DP        0|0:86:27       0|1:100:23      0|0:100:69
+5      36439829        rs2967080       G       A       .       PASS    AA=G;DP=119     GT:GQ:DP        0|0:86:27       0|1:100:23      0|0:100:70
+6      85295346        .       A       G       .       PASS    AA=A;DP=119     GT:GQ:DP        0|0:86:27       0|1:100:23      0|0:100:70
+5      125668445       rs62391825      T       C       .       PASS    AA=C;DP=121     GT:GQ:DP        0|0:86:27       0|1:100:23      0|0:100:72
+8      114757507       .       A       T       .       PASS    AA=A;DP=123     GT:GQ:DP        0|0:86:27       0|1:100:23      0|0:100:75
+18     31130979        rs9944988       A       G       .       PASS    AA=A;DP=129     GT:GQ:DP        0|0:86:27       0|1:100:23      0|0:100:81
+4      126787485       .       C       T       .       PASS    AA=C;DP=131     GT:GQ:DP        0|0:86:27       0|1:100:23      0|0:100:82
+5      135664325       .       G       A       .       PASS    AA=G;DP=133     GT:GQ:DP        0|0:86:27       0|1:100:23      0|0:100:82
+7      151221381       .       C       T       .       PASS    AA=C;DP=144     GT:GQ:DP        0|0:86:27       0|1:100:24      0|0:100:54
+2      34050445        rs62132790      C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        0|0:86:27       0|1:100:24      0|0:100:58
+17     13709718        rs58234823      A       C       .       PASS    AA=A;DP=110     GT:GQ:DP        0|0:86:27       0|1:100:24      0|0:100:60
+12     108503281       rs61940514      C       T       .       PASS    AA=c;DP=117     GT:GQ:DP        0|0:86:27       0|1:100:24      0|0:100:66
+11     112924804       .       A       T       .       PASS    AA=A;DP=116     GT:GQ:DP        0|0:86:27       0|1:100:24      0|0:100:67
+5      54609656        rs4865601       G       A       .       PASS    AA=G;DP=119     GT:GQ:DP        0|0:86:27       0|1:100:24      0|0:100:71
+7      12736014        rs6977767       C       A       .       PASS    AA=A;DP=127     GT:GQ:DP        0|0:86:27       0|1:100:24      0|0:100:74
+6      10589430        .       G       A       .       PASS    AA=g;DP=133     GT:GQ:DP        0|0:86:27       0|1:100:24      0|0:100:77
+6      397375  .       A       G       .       PASS    AA=a;DP=129     GT:GQ:DP        0|0:86:27       0|1:100:24      0|0:100:79
+5      76230815        .       C       T       .       PASS    AA=c;DP=132     GT:GQ:DP        0|0:86:27       0|1:100:24      0|0:100:84
+9      12781031        rs7029119       C       T       .       PASS    AA=C;DP=138     GT:GQ:DP        0|0:86:27       0|1:100:24      0|0:99:33
+7      44143071        .       A       G       .       PASS    AA=A;DP=137     GT:GQ:DP        0|0:86:27       0|1:100:25      0|0:100:36
+5      42124064        .       G       T       .       PASS    AA=G;DP=136     GT:GQ:DP        0|0:86:27       0|1:100:25      0|0:100:38
+13     68493910        rs9592604       C       T       .       PASS    AA=T;DP=108     GT:GQ:DP        0|0:86:27       0|1:100:25      0|0:100:55
+9      79366002        rs7872918       T       C       .       PASS    AA=C;DP=126     GT:GQ:DP        0|0:86:27       0|1:100:25      0|0:100:75
+10     31421419        rs7072501       C       T       .       PASS    AA=C;DP=132     GT:GQ:DP        0|0:86:27       0|1:100:25      0|0:100:81
+5      106348868       rs62378961      C       A       .       PASS    AA=C;DP=136     GT:GQ:DP        0|0:86:27       0|1:100:25      0|0:100:83
+2      77470137        .       T       C       .       PASS    AA=T;DP=99      GT:GQ:DP        0|0:86:27       0|1:100:26      0|0:100:46
+21     20951487        rs28478156      A       C       .       PASS    AA=A;DP=103     GT:GQ:DP        0|0:86:27       0|1:100:26      0|0:100:52
+2      151500176       .       C       T       .       PASS    AA=C;DP=106     GT:GQ:DP        0|0:86:27       0|1:100:26      0|0:100:54
+1      177322152       .       T       G       .       PASS    AA=T;DP=111     GT:GQ:DP        0|0:86:27       0|1:100:26      0|0:100:58
+13     73435802        rs9318237       A       C       .       PASS    AA=A;DP=110     GT:GQ:DP        0|0:86:27       0|1:100:26      0|0:100:59
+13     74722289        rs9543876       T       A       .       PASS    AA=T;DP=112     GT:GQ:DP        0|0:86:27       0|1:100:26      0|0:100:59
+6      91472400        rs1145746       A       C       .       PASS    AA=A;DP=116     GT:GQ:DP        0|0:86:27       0|1:100:26      0|0:100:63
+7      41299604        .       C       T       .       PASS    AA=c;DP=117     GT:GQ:DP        0|0:86:27       0|1:100:26      0|0:100:65
+18     28502156        rs28627532      G       A       .       PASS    AA=G;DP=118     GT:GQ:DP        0|0:86:27       0|1:100:26      0|0:100:66
+17     48643073        rs9909448       A       G       .       PASS    AA=A;DP=123     GT:GQ:DP        0|0:86:27       0|1:100:26      0|0:100:71
+6      2569261 rs1150656       T       G       .       PASS    AA=T;DP=130     GT:GQ:DP        0|0:86:27       0|1:100:26      0|0:100:79
+21     23063350        rs243009        T       C       .       PASS    AA=C;DP=137     GT:GQ:DP        0|0:86:27       0|1:100:27      0|0:100:37
+14     69518143        rs11627861      G       A       .       PASS    AA=G;DP=140     GT:GQ:DP        0|0:86:27       0|1:100:27      0|0:100:41
+5      162393345       .       T       C       .       PASS    AA=T;DP=109     GT:GQ:DP        0|0:86:27       0|1:100:27      0|0:100:50
+8      62176884        .       G       A       .       PASS    AA=G;DP=109     GT:GQ:DP        0|0:86:27       0|1:100:27      0|0:100:56
+9      93695274        rs7875037       A       G       .       PASS    AA=a;DP=117     GT:GQ:DP        0|0:86:27       0|1:100:27      0|0:100:64
+8      50709140        rs16910663      G       A       .       PASS    AA=.;DP=121     GT:GQ:DP        0|0:86:27       0|1:100:27      0|0:100:66
+16     5769097 rs2342732       T       A       .       PASS    AA=A;DP=133     GT:GQ:DP        0|0:86:27       0|1:100:27      0|0:100:81
+19     58255248        .       C       T       .       PASS    AA=c;DP=107     GT:GQ:DP        0|0:86:27       0|1:100:28      0|0:100:51
+7      36828206        rs11763633      G       C       .       PASS    AA=G;DP=121     GT:GQ:DP        0|0:86:27       0|1:100:28      0|0:100:67
+12     79750567        rs12311734      C       T       .       PASS    AA=C;DP=124     GT:GQ:DP        0|0:86:27       0|1:100:28      0|0:100:72
+7      29876724        rs11971596      T       G       .       PASS    AA=T;DP=130     GT:GQ:DP        0|0:86:27       0|1:100:28      0|0:73:36
+6      96801119        .       A       G       .       PASS    AA=A;DP=116     GT:GQ:DP        0|0:86:27       0|1:100:29      0|0:100:61
+11     5019416 rs61880508      G       A       .       PASS    AA=G;DP=118     GT:GQ:DP        0|0:86:27       0|1:100:29      0|0:100:62
+21     41441735        .       G       A       .       PASS    AA=G;DP=147     GT:GQ:DP        0|0:86:27       0|1:100:31      0|0:100:48
+4      38469343        rs28659797      G       A       .       PASS    AA=G;DP=115     GT:GQ:DP        0|0:86:27       0|1:100:31      0|0:100:59
+20     37830284        rs458638        A       G       .       PASS    AA=A;DP=139     GT:GQ:DP        0|0:86:27       0|1:100:31      0|0:100:82
+1      172548109       rs10912760      T       C       .       PASS    AA=T;DP=109     GT:GQ:DP        0|0:86:27       0|1:100:31      0|0:81:38
+3      120431870       .       C       T       .       PASS    AA=C;DP=130     GT:GQ:DP        0|0:86:27       0|1:100:31      0|0:93:31
+1      184800419       .       C       A       .       PASS    AA=C;DP=139     GT:GQ:DP        0|0:86:27       0|1:100:31      0|0:96:32
+7      11507445        .       A       C       .       PASS    AA=A;DP=136     GT:GQ:DP        0|0:86:27       0|1:100:32      0|0:100:41
+11     80606480        .       A       T       .       PASS    AA=A;DP=121     GT:GQ:DP        0|0:86:27       0|1:100:32      0|0:100:61
+4      166200592       rs6819917       A       G       .       PASS    AA=A;DP=130     GT:GQ:DP        0|0:86:27       0|1:100:32      0|0:100:70
+X      37089820        .       T       C       .       PASS    AA=T;DP=128     GT:GQ:DP        0|0:86:27       0|1:100:33      0|0:100:35
+5      153654090       rs13158652      C       T       .       PASS    AA=C;DP=136     GT:GQ:DP        0|0:86:27       0|1:100:34      0|0:100:76
+X      23099317        rs2214605       T       C       .       PASS    AA=C;DP=162     GT:GQ:DP        0|0:86:27       0|1:100:41      0|0:100:45
+4      57817610        .       G       A       .       PASS    AA=g;DP=89      GT:GQ:DP        0|0:86:27       0|1:100:8       0|0:100:54
+14     99701650        .       C       T       .       PASS    AA=C;DP=101     GT:GQ:DP        0|0:86:28       0|1:100:10      0|0:100:53
+16     6010169 .       C       T       .       PASS    AA=C;DP=95      GT:GQ:DP        0|0:86:28       0|1:100:12      0|0:100:54
+10     126174965       .       G       A       .       PASS    AA=G;DP=144     GT:GQ:DP        0|0:86:28       0|1:100:13      0|0:100:100
+20     61101222        .       G       A       .       PASS    AA=g;DP=126     GT:GQ:DP        0|0:86:28       0|1:100:13      0|0:100:85
+18     71353719        .       C       T       .       PASS    AA=c;DP=105     GT:GQ:DP        0|0:86:28       0|1:100:15      0|0:100:62
+7      155606106       .       G       A       .       PASS    AA=g;DP=114     GT:GQ:DP        0|0:86:28       0|1:100:15      0|0:100:71
+5      11358116        .       T       A       .       PASS    AA=T;DP=123     GT:GQ:DP        0|0:86:28       0|1:100:15      0|0:100:83
+11     57839412        .       T       A       .       PASS    AA=T;DP=98      GT:GQ:DP        0|0:86:28       0|1:100:16      0|0:100:56
+22     33282775        .       A       T       .       PASS    AA=A;DP=93      GT:GQ:DP        0|0:86:28       0|1:100:17      0|0:100:47
+8      85718399        .       G       A       .       PASS    AA=G;DP=104     GT:GQ:DP        0|0:86:28       0|1:100:17      0|0:100:59
+20     55085035        .       G       A       .       PASS    AA=G;DP=104     GT:GQ:DP        0|0:86:28       0|1:100:18      0|0:100:62
+3      15016960        .       G       A       .       PASS    AA=G;DP=138     GT:GQ:DP        0|0:86:28       0|1:100:18      0|0:96:34
+1      113506839       .       C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        0|0:86:28       0|1:100:19      0|0:100:62
+6      153743839       rs17083973      C       T       .       PASS    AA=c;DP=90      GT:GQ:DP        0|0:86:28       0|1:100:20      0|0:100:42
+5      90236428        .       C       T       .       PASS    AA=C;DP=108     GT:GQ:DP        0|0:86:28       0|1:100:20      0|0:100:62
+12     47460523        rs35468640      T       C       .       PASS    AA=C;DP=113     GT:GQ:DP        0|0:86:28       0|1:100:20      0|0:100:67
+6      135879533       .       C       T       .       PASS    AA=C;DP=100     GT:GQ:DP        0|0:86:28       0|1:100:21      0|0:100:52
+9      26386150        .       T       C       .       PASS    AA=T;DP=105     GT:GQ:DP        0|0:86:28       0|1:100:21      0|0:100:54
+6      120183880       rs7751642       C       T       .       PASS    AA=T;DP=117     GT:GQ:DP        0|0:86:28       0|1:100:21      0|0:100:67
+2      136789851       rs6749212       A       G       .       PASS    AA=A;DP=133     GT:GQ:DP        0|0:86:28       0|1:100:21      0|0:100:87
+12     76220580        rs7968353       C       A       .       PASS    AA=C;DP=97      GT:GQ:DP        0|0:86:28       0|1:100:21      0|0:96:36
+7      132995113       rs10274470      T       C       .       PASS    AA=T;DP=149     GT:GQ:DP        0|0:86:28       0|1:100:22      0|0:100:48
+11     88472756        rs11018473      C       A       .       PASS    AA=C;DP=100     GT:GQ:DP        0|0:86:28       0|1:100:22      0|0:100:50
+1      39245172        rs10888621      A       G       .       PASS    AA=G;DP=110;HM2;HM3     GT:GQ:DP        0|0:86:28       0|1:100:22      0|0:100:63
+3      189729223       rs1820434       T       C       .       PASS    AA=t;DP=134     GT:GQ:DP        0|0:86:28       0|1:100:23      0|0:100:37
+2      74096766        .       G       A       .       PASS    AA=G;DP=108     GT:GQ:DP        0|0:86:28       0|1:100:23      0|0:100:48
+12     105175200       .       C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        0|0:86:28       0|1:100:23      0|0:100:60
+X      1504542 rs3203702       C       T       .       PASS    AA=c;DP=94      GT:GQ:DP        0|0:86:28       0|1:100:24      0|0:100:38
+9      103615940       rs2013601       C       A       .       PASS    AA=C;DP=144     GT:GQ:DP        0|0:86:28       0|1:100:24      0|0:100:48
+2      5678814 .       T       C       .       PASS    AA=T;DP=117     GT:GQ:DP        0|0:86:28       0|1:100:24      0|0:100:65
+7      103838868       rs17137410      A       G       .       PASS    AA=A;DP=121     GT:GQ:DP        0|0:86:28       0|1:100:24      0|0:100:66
+12     48401943        rs60126713      G       A       .       PASS    AA=G;DP=122     GT:GQ:DP        0|0:86:28       0|1:100:24      0|0:100:68
+10     82674558        rs11187675      T       A       .       PASS    AA=T;DP=129     GT:GQ:DP        0|0:86:28       0|1:100:24      0|0:100:78
+1      86641331        rs977919        T       A       .       PASS    AA=T;DP=132     GT:GQ:DP        0|0:86:28       0|1:100:24      0|0:100:81
+9      123032969       .       G       A       .       PASS    AA=G;DP=132     GT:GQ:DP        0|0:86:28       0|1:100:25      0|0:100:39
+1      72669242        rs2422221       C       T       .       PASS    AA=C;DP=98;HM2;HM3      GT:GQ:DP        0|0:86:28       0|1:100:25      0|0:100:48
+2      171598552       rs12618898      A       C       .       PASS    AA=A;DP=100     GT:GQ:DP        0|0:86:28       0|1:100:25      0|0:100:49
+22     16364962        .       G       A       .       PASS    AA=G;DP=129     GT:GQ:DP        0|0:86:28       0|1:100:25      0|0:100:77
+11     80993063        rs58000470      C       T       .       PASS    AA=T;DP=147     GT:GQ:DP        0|0:86:28       0|1:100:25      0|0:100:81
+6      112426492       .       C       T       .       PASS    AA=C;DP=145     GT:GQ:DP        0|0:86:28       0|1:100:26      0|0:100:43
+7      44602379        rs6965890       G       C       .       PASS    AA=G;DP=115     GT:GQ:DP        0|0:86:28       0|1:100:26      0|0:100:61
+17     51981567        rs1984543       G       A       .       PASS    AA=A;DP=131     GT:GQ:DP        0|0:86:28       0|1:100:26      0|0:96:32
+3      1636459 .       G       A       .       PASS    AA=G;DP=136     GT:GQ:DP        0|0:86:28       0|1:100:27      0|0:100:40
+7      154572639       .       A       G       .       PASS    AA=A;DP=133     GT:GQ:DP        0|0:86:28       0|1:100:27      0|0:100:80
+12     88063777        .       C       T       .       PASS    AA=C;DP=122     GT:GQ:DP        0|0:86:28       0|1:100:28      0|0:100:65
+10     63158281        .       T       C       .       PASS    AA=T;DP=126     GT:GQ:DP        0|0:86:28       0|1:100:28      0|0:100:69
+7      147515371       .       G       C       .       PASS    AA=G;DP=148     GT:GQ:DP        0|0:86:28       0|1:100:29      0|0:100:36
+18     54007157        rs11876334      G       C       .       PASS    AA=G;DP=135     GT:GQ:DP        0|0:86:28       0|1:100:29      0|0:100:41
+6      122933060       rs12211993      A       G       .       PASS    AA=a;DP=150     GT:GQ:DP        0|0:86:28       0|1:100:29      0|0:100:50
+6      50810793        .       A       G       .       PASS    AA=A;DP=144     GT:GQ:DP        0|0:86:28       0|1:100:29      0|0:100:86
+6      74031725        .       G       T       .       PASS    AA=G;DP=139     GT:GQ:DP        0|0:86:28       0|1:100:30      0|0:100:38
+2      51189191        rs7559189       G       A       .       PASS    AA=g;DP=119     GT:GQ:DP        0|0:86:28       0|1:100:30      0|0:100:64
+3      35338888        rs9808910       A       G       .       PASS    AA=A;DP=117     GT:GQ:DP        0|0:86:28       0|1:100:32      0|0:100:56
+6      20777121        rs55636926      T       C       .       PASS    AA=C;DP=129     GT:GQ:DP        0|0:86:28       0|1:100:32      0|0:100:71
+12     10701585        rs11837154      A       G       .       PASS    AA=A;DP=138     GT:GQ:DP        0|0:86:28       0|1:100:33      0|0:100:78
+10     132242558       .       G       A       .       PASS    AA=G;DP=137     GT:GQ:DP        0|0:86:28       0|1:100:34      0|0:100:76
+3      16802972        rs17042743      G       T       .       PASS    AA=G;DP=161     GT:GQ:DP        0|0:86:28       0|1:100:42      0|0:100:49
+22     47334050        .       G       A       .       PASS    AA=G;DP=127     GT:GQ:DP        0|0:86:28       1|0:100:12      0|1:100:87
+6      95100405        rs55758421      A       G       .       PASS    AA=A;DP=100     GT:GQ:DP        0|0:86:28       1|0:100:14      0|1:100:60
+6      12944172        rs6458494       T       C       .       PASS    AA=C;DP=87      GT:GQ:DP        0|0:86:28       1|0:100:15      0|1:100:36
+11     81425700        rs640290        G       A       .       PASS    AA=G;DP=98      GT:GQ:DP        0|0:86:28       1|0:100:15      0|1:100:57
+16     26728687        .       G       T       .       PASS    AA=G;DP=90      GT:GQ:DP        0|0:86:28       1|0:100:15      0|1:87:46
+1      101712759       rs57977607      A       T       .       PASS    AA=A;DP=99      GT:GQ:DP        0|0:86:28       1|0:100:16      0|1:100:55
+2      210406003       rs2286852       T       C       .       PASS    AA=T;DP=101     GT:GQ:DP        0|0:86:28       1|0:100:16      0|1:100:58
+8      42945926        .       A       G       .       PASS    AA=A;DP=109     GT:GQ:DP        0|0:86:28       1|0:100:16      0|1:100:65
+5      171953410       .       G       A       .       PASS    AA=G;DP=108     GT:GQ:DP        0|0:86:28       1|0:100:16      0|1:100:66
+6      15268573        .       G       A       .       PASS    AA=G;DP=115     GT:GQ:DP        0|0:86:28       1|0:100:16      0|1:100:76
+12     4555295 rs11063245      T       G       .       PASS    AA=T;DP=90      GT:GQ:DP        0|0:86:28       1|0:100:17      0|1:100:44
+7      103748452       rs7459202       G       A       .       PASS    AA=C;DP=97      GT:GQ:DP        0|0:86:28       1|0:100:17      0|1:100:50
+21     20133509        .       T       C       .       PASS    AA=T;DP=94      GT:GQ:DP        0|0:86:28       1|0:100:17      0|1:100:51
+8      19457771        rs28566514      C       T       .       PASS    AA=N;DP=103     GT:GQ:DP        0|0:86:28       1|0:100:17      0|1:100:59
+1      19857667        .       C       T       .       PASS    AA=C;DP=111     GT:GQ:DP        0|0:86:28       1|0:100:17      0|1:100:63
+1      246593682       rs28415498      T       G       .       PASS    AA=t;DP=121     GT:GQ:DP        0|0:86:28       1|0:100:17      0|1:100:65
+5      7647437 .       T       C       .       PASS    AA=C;DP=143     GT:GQ:DP        0|0:86:28       1|0:100:17      0|1:100:98
+10     109101157       rs34918172      A       G       .       PASS    AA=G;DP=84      GT:GQ:DP        0|0:86:28       1|0:100:18      0|1:100:38
+6      29244223        rs3116853       G       A       .       PASS    AA=g;DP=95      GT:GQ:DP        0|0:86:28       1|0:100:18      0|1:100:50
+19     18273189        .       T       A       .       PASS    AA=T;DP=99      GT:GQ:DP        0|0:86:28       1|0:100:18      0|1:100:51
+14     48160835        rs57899168      C       A       .       PASS    AA=C;DP=98      GT:GQ:DP        0|0:86:28       1|0:100:18      0|1:100:52
+1      196651164       .       T       C       .       PASS    AA=T;DP=103     GT:GQ:DP        0|0:86:28       1|0:100:18      0|1:100:53
+7      4062871 rs60864863      A       G       .       PASS    AA=a;DP=103     GT:GQ:DP        0|0:86:28       1|0:100:18      0|1:100:60
+14     47590675        .       C       G       .       PASS    AA=c;DP=107     GT:GQ:DP        0|0:86:28       1|0:100:18      0|1:100:62
+11     118073091       rs497678        T       C       .       PASS    AA=C;DP=119     GT:GQ:DP        0|0:86:28       1|0:100:18      0|1:100:72
+15     38249213        rs60743501      T       C       .       PASS    AA=C;DP=92      GT:GQ:DP        0|0:86:28       1|0:100:19      0|1:100:37
+4      81008304        .       A       T       .       PASS    AA=A;DP=91      GT:GQ:DP        0|0:86:28       1|0:100:19      0|1:100:37
+13     65403219        .       G       A       .       PASS    AA=g;DP=93      GT:GQ:DP        0|0:86:28       1|0:100:19      0|1:100:46
+6      29497668        .       A       G       .       PASS    AA=A;DP=104     GT:GQ:DP        0|0:86:28       1|0:100:19      0|1:100:61
+8      26779495        .       G       C       .       PASS    AA=G;DP=117     GT:GQ:DP        0|0:86:28       1|0:100:19      0|1:100:71
+6      160520510       rs9456509       C       T       .       PASS    AA=c;DP=121     GT:GQ:DP        0|0:86:28       1|0:100:19      0|1:100:74
+4      135650258       .       G       T       .       PASS    AA=G;DP=120     GT:GQ:DP        0|0:86:28       1|0:100:19      0|1:100:76
+2      130284262       rs2464775       C       T       .       PASS    AA=T;DP=93      GT:GQ:DP        0|0:86:28       1|0:100:20      0|1:100:45
+4      148727338       .       G       T       .       PASS    AA=G;DP=99      GT:GQ:DP        0|0:86:28       1|0:100:20      0|1:100:51
+15     66937914        rs7182608       C       T       .       PASS    AA=C;DP=100     GT:GQ:DP        0|0:86:28       1|0:100:20      0|1:100:52
+11     105768507       .       A       G       .       PASS    AA=A;DP=102     GT:GQ:DP        0|0:86:28       1|0:100:20      0|1:100:58
+18     49392954        rs9966535       T       C       .       PASS    AA=T;DP=108     GT:GQ:DP        0|0:86:28       1|0:100:20      0|1:100:60
+4      146824048       rs11732464      C       T       .       PASS    AA=C;DP=108     GT:GQ:DP        0|0:86:28       1|0:100:20      0|1:100:62
+4      189301946       rs28463290      C       G       .       PASS    AA=C;DP=138     GT:GQ:DP        0|0:86:28       1|0:100:21      0|1:100:42
+5      143515732       rs12513401      G       C       .       PASS    AA=G;DP=92      GT:GQ:DP        0|0:86:28       1|0:100:21      0|1:100:44
+1      185419757       rs9787305       A       T       .       PASS    AA=A;DP=110     GT:GQ:DP        0|0:86:28       1|0:100:21      0|1:100:61
+8      32557942        rs4272338       T       G       .       PASS    AA=T;DP=110     GT:GQ:DP        0|0:86:28       1|0:100:21      0|1:100:61
+5      77825762        .       G       T       .       PASS    AA=G;DP=136     GT:GQ:DP        0|0:86:28       1|0:100:21      0|1:100:86
+10     119612782       rs7092717       T       G       .       PASS    AA=G;DP=140     GT:GQ:DP        0|0:86:28       1|0:100:21      0|1:100:91
+1      234697166       rs16833708      G       A       .       PASS    AA=g;DP=93;HM2  GT:GQ:DP        0|0:86:28       1|0:100:22      0|1:100:33
+5      63849763        .       T       C       .       PASS    AA=T;DP=98      GT:GQ:DP        0|0:86:28       1|0:100:22      0|1:100:50
+7      15746482        .       G       C       .       PASS    AA=G;DP=111     GT:GQ:DP        0|0:86:28       1|0:100:22      0|1:100:60
+8      1374022 rs6996408       T       A       .       PASS    AA=T;DP=111     GT:GQ:DP        0|0:86:28       1|0:100:22      0|1:100:61
+5      31831141        rs6870534       A       T       .       PASS    AA=T;DP=112     GT:GQ:DP        0|0:86:28       1|0:100:22      0|1:100:63
+6      29443536        .       G       C       .       PASS    AA=C;DP=114     GT:GQ:DP        0|0:86:28       1|0:100:22      0|1:100:65
+8      31374386        rs16878003      A       T       .       PASS    AA=A;DP=121     GT:GQ:DP        0|0:86:28       1|0:100:22      0|1:100:71
+2      10337745        rs56899644      C       T       .       PASS    AA=C;DP=121     GT:GQ:DP        0|0:86:28       1|0:100:22      0|1:100:73
+10     124498952       .       A       G       .       PASS    AA=A;DP=126     GT:GQ:DP        0|0:86:28       1|0:100:22      0|1:100:78
+12     101731669       rs34230227      G       A       .       PASS    AA=G;DP=132     GT:GQ:DP        0|0:86:28       1|0:100:22      0|1:100:84
+21     32045152        rs16988472      A       G       .       PASS    AA=A;DP=129     GT:GQ:DP        0|0:86:28       1|0:100:23      0|1:100:34
+6      81135834        rs9448944       T       G       .       PASS    AA=T;DP=99      GT:GQ:DP        0|0:86:28       1|0:100:23      0|1:100:48
+4      138283115       rs57671649      T       C       .       PASS    AA=T;DP=110     GT:GQ:DP        0|0:86:28       1|0:100:23      0|1:100:57
+7      105362402       rs55785723      A       G       .       PASS    AA=A;DP=112     GT:GQ:DP        0|0:86:28       1|0:100:23      0|1:100:63
+12     84635488        .       C       A       .       PASS    AA=C;DP=117     GT:GQ:DP        0|0:86:28       1|0:100:23      0|1:100:66
+4      142390504       rs7695364       A       G       .       PASS    AA=A;DP=119     GT:GQ:DP        0|0:86:28       1|0:100:23      0|1:100:68
+2      108891962       rs260633        C       T       .       PASS    AA=C;DP=136     GT:GQ:DP        0|0:86:28       1|0:100:23      0|1:100:85
+1      117730622       rs953119        A       G       .       PASS    AA=A;DP=96;HM2;HM3      GT:GQ:DP        0|0:86:28       1|0:100:24      0|1:100:33
+6      22017731        rs7738735       C       T       .       PASS    AA=C;DP=144     GT:GQ:DP        0|0:86:28       1|0:100:24      0|1:100:49
+4      77078639        rs13138223      A       T       .       PASS    AA=A;DP=114     GT:GQ:DP        0|0:86:28       1|0:100:24      0|1:100:62
+14     81638949        rs12887223      C       A       .       PASS    AA=C;DP=127     GT:GQ:DP        0|0:86:28       1|0:100:24      0|1:100:63
+2      23156892        rs58230285      T       C       .       PASS    AA=T;DP=125     GT:GQ:DP        0|0:86:28       1|0:100:24      0|1:100:67
+20     5647112 .       A       T       .       PASS    AA=A;DP=119     GT:GQ:DP        0|0:86:28       1|0:100:24      0|1:100:67
+5      111056969       rs27755 A       T       .       PASS    AA=A;DP=123     GT:GQ:DP        0|0:86:28       1|0:100:24      0|1:100:70
+1      64364779        .       G       C       .       PASS    AA=G;DP=126     GT:GQ:DP        0|0:86:28       1|0:100:24      0|1:100:76
+1      157375321       rs3026922       C       T       .       PASS    AA=T;DP=113     GT:GQ:DP        0|0:86:28       1|0:100:25      0|1:100:61
+3      111043553       rs7646029       G       A       .       PASS    AA=G;DP=119     GT:GQ:DP        0|0:86:28       1|0:100:25      0|1:100:66
+16     10260124        rs194340        T       C       .       PASS    AA=T;DP=123     GT:GQ:DP        0|0:86:28       1|0:100:25      0|1:100:71
+4      152678980       rs28535678      A       G       .       PASS    AA=A;DP=124     GT:GQ:DP        0|0:86:28       1|0:100:25      0|1:100:71
+17     55127878        .       A       G       .       PASS    AA=A;DP=122     GT:GQ:DP        0|0:86:28       1|0:100:25      0|1:100:72
+4      78258267        rs57011953      A       G       .       PASS    AA=G;DP=139     GT:GQ:DP        0|0:86:28       1|0:100:25      0|1:100:77
+11     99047277        rs609318        A       T       .       PASS    AA=T;DP=90      GT:GQ:DP        0|0:86:28       1|0:100:26      0|1:100:27
+4      139132410       rs17232425      A       G       .       PASS    AA=G;DP=117     GT:GQ:DP        0|0:86:28       1|0:100:26      0|1:100:60
+7      102285615       rs11973870      A       G       .       PASS    AA=G;DP=116     GT:GQ:DP        0|0:86:28       1|0:100:26      0|1:100:63
+7      56660518        .       A       G       .       PASS    AA=a;DP=120     GT:GQ:DP        0|0:86:28       1|0:100:26      0|1:100:65
+10     67722072        rs10997037      C       T       .       PASS    AA=C;DP=137     GT:GQ:DP        0|0:86:28       1|0:100:26      0|1:100:79
+13     50235697        rs9562999       G       A       .       PASS    AA=A;DP=135     GT:GQ:DP        0|0:86:28       1|0:100:26      0|1:100:80
+17     7975731 .       G       A       .       PASS    AA=G;DP=135     GT:GQ:DP        0|0:86:28       1|0:100:27      0|1:100:41
+7      14696642        .       T       C       .       PASS    AA=T;DP=103     GT:GQ:DP        0|0:86:28       1|0:100:27      0|1:100:47
+14     97171833        .       G       A       .       PASS    AA=g;DP=113     GT:GQ:DP        0|0:86:28       1|0:100:27      0|1:100:56
+19     59401189        rs12982851      A       G       .       PASS    AA=G;DP=111     GT:GQ:DP        0|0:86:28       1|0:100:27      0|1:100:59
+2      57761104        rs6754038       T       C       .       PASS    AA=T;DP=122     GT:GQ:DP        0|0:86:28       1|0:100:27      0|1:100:69
+11     124945989       rs7945490       C       T       .       PASS    AA=C;DP=126     GT:GQ:DP        0|0:86:28       1|0:100:27      0|1:100:72
+2      1443046 .       A       G       .       PASS    AA=A;DP=127     GT:GQ:DP        0|0:86:28       1|0:100:27      0|1:100:75
+21     40816350        .       G       T       .       PASS    AA=G;DP=131     GT:GQ:DP        0|0:86:28       1|0:100:27      0|1:100:78
+5      50454682        rs12055151      T       A       .       PASS    AA=T;DP=101     GT:GQ:DP        0|0:86:28       1|0:100:28      0|1:100:37
+12     105993065       rs4616135       T       C       .       PASS    AA=T;DP=103     GT:GQ:DP        0|0:86:28       1|0:100:28      0|1:100:47
+5      120370003       .       A       G       .       PASS    AA=A;DP=126     GT:GQ:DP        0|0:86:28       1|0:100:28      0|1:100:67
+8      98315491        rs11992204      G       T       .       PASS    AA=T;DP=153     GT:GQ:DP        0|0:86:28       1|0:100:28      0|1:100:97
+1      68643615        rs11209290      G       A       .       PASS    AA=G;DP=114;HM2;HM3     GT:GQ:DP        0|0:86:28       1|0:100:29      0|1:100:57
+6      30448605        .       G       A       .       PASS    AA=G;DP=129     GT:GQ:DP        0|0:86:28       1|0:100:29      0|1:100:70
+1      150775665       rs61230786      T       A       .       PASS    AA=T;DP=128     GT:GQ:DP        0|0:86:28       1|0:100:29      0|1:100:71
+12     99079909        .       T       G       .       PASS    AA=T;DP=130     GT:GQ:DP        0|0:86:28       1|0:100:29      0|1:100:73
+13     71659576        rs7325271       T       C       .       PASS    AA=T;DP=129     GT:GQ:DP        0|0:86:28       1|0:100:29      0|1:100:73
+18     26862189        rs276944        G       A       .       PASS    AA=A;DP=137     GT:GQ:DP        0|0:86:28       1|0:100:29      0|1:100:82
+1      105110595       .       G       A       .       PASS    AA=G;DP=152     GT:GQ:DP        0|0:86:28       1|0:100:29      0|1:100:96
+9      2631852 rs57191495      T       C       .       PASS    AA=T;DP=115     GT:GQ:DP        0|0:86:28       1|0:100:31      0|1:100:56
+11     15271211        .       A       T       .       PASS    AA=A;DP=132     GT:GQ:DP        0|0:86:28       1|0:100:31      0|1:100:75
+9      128642075       rs10819237      G       T       .       PASS    AA=G;DP=140     GT:GQ:DP        0|0:86:28       1|0:100:32      0|1:100:32
+4      59480722        .       A       T       .       PASS    AA=A;DP=112     GT:GQ:DP        0|0:86:28       1|0:100:32      0|1:100:52
+5      16109452        .       T       G       .       PASS    AA=G;DP=126     GT:GQ:DP        0|0:86:28       1|0:100:32      0|1:100:65
+10     83200156        rs60295570      T       G       .       PASS    AA=T;DP=140     GT:GQ:DP        0|0:86:28       1|0:100:32      0|1:100:79
+18     71521164        .       T       C       .       PASS    AA=T;DP=147     GT:GQ:DP        0|0:86:28       1|0:100:32      0|1:100:88
+3      169473234       rs13087339      G       A       .       PASS    AA=A;DP=147     GT:GQ:DP        0|0:86:28       1|0:100:33      0|1:100:90
+4      31858091        .       T       G       .       PASS    AA=T;DP=117     GT:GQ:DP        0|0:86:28       1|0:100:34      0|1:100:55
+4      79027569        .       G       T       .       PASS    AA=G;DP=121     GT:GQ:DP        0|0:86:28       1|0:100:34      0|1:100:58
+5      39348479        rs155375        C       T       .       PASS    AA=C;DP=129     GT:GQ:DP        0|0:86:28       1|0:100:34      0|1:100:66
+2      175569466       rs34464761      A       C       .       PASS    AA=A;DP=127     GT:GQ:DP        0|0:86:28       1|0:100:35      0|1:100:64
+21     21113069        .       T       G       .       PASS    AA=T;DP=146     GT:GQ:DP        0|0:86:28       1|0:100:35      0|1:100:83
+7      150817696       rs61045170      T       G       .       PASS    AA=T;DP=150     GT:GQ:DP        0|0:86:28       1|0:100:36      0|1:100:91
+16     16633880        rs28522604      A       G       .       PASS    AA=a;DP=148     GT:GQ:DP        0|0:86:28       1|0:100:39      0|1:62:81
+16     73969022        rs4993969       A       T       .       PASS    AA=A;DP=153     GT:GQ:DP        0|0:86:28       1|0:100:42      0|1:100:85
+8      136482267       rs2061127       G       A       .       PASS    AA=G;DP=97      GT:GQ:DP        0|0:86:28       1|0:34:17       0|1:100:52
+13     25260214        rs3920613       G       A       .       PASS    AA=G;DP=103     GT:GQ:DP        0|0:86:28       1|0:36:20       0|1:100:55
+22     19650706        rs5761571       T       C       .       PASS    AA=T;DP=89      GT:GQ:DP        0|0:86:28       1|0:38:9        0|1:100:46
+17     10814339        rs7225124       C       T       .       PASS    AA=C;DP=130     GT:GQ:DP        0|0:86:28       1|0:45:27       0|1:100:75
+14     93291700        .       G       C       .       PASS    AA=G;DP=131     GT:GQ:DP        0|0:86:28       1|0:46:18       0|1:100:41
+2      129425975       rs2245303       A       G       .       PASS    AA=A;DP=119     GT:GQ:DP        0|0:86:28       1|0:49:14       0|1:100:77
+5      124049276       rs12656496      C       G       .       PASS    AA=C;DP=124     GT:GQ:DP        0|0:86:28       1|0:49:26       0|1:100:69
+11     20785400        rs3908147       A       C       .       PASS    AA=C;DP=126     GT:GQ:DP        0|0:86:28       1|0:50:23       0|1:100:70
+17     56912285        .       C       T       .       PASS    AA=C;DP=103     GT:GQ:DP        0|0:86:28       1|0:52:9        0|1:100:67
+7      62296777        rs61133425      C       T       .       PASS    AA=c;DP=100     GT:GQ:DP        0|0:86:28       1|0:54:16       0|1:100:57
+18     28950535        rs271565        C       T       .       PASS    AA=T;DP=104     GT:GQ:DP        0|0:86:28       1|0:54:21       0|1:100:58
+7      2707702 .       G       A       .       PASS    AA=g;DP=112     GT:GQ:DP        0|0:86:28       1|0:56:16       0|1:100:67
+10     34260285        .       A       G       .       PASS    AA=A;DP=93      GT:GQ:DP        0|0:86:28       1|0:56:8        0|1:100:58
+15     28936724        rs55947069      A       T       .       PASS    AA=a;DP=80      GT:GQ:DP        0|0:86:28       1|0:57:16       0|1:100:31
+1      152581032       rs749966        C       T       .       PASS    AA=C;DP=102;HM2;HM3     GT:GQ:DP        0|0:86:28       1|0:57:17       0|1:100:44
+1      35137623        rs7544234       G       A       .       PASS    AA=G;DP=97      GT:GQ:DP        0|0:86:28       1|0:62:15       0|1:100:53
+6      30535827        .       G       C       .       PASS    AA=g;DP=92      GT:GQ:DP        0|0:86:28       1|0:64:21       0|1:100:44
+14     59020443        rs2296842       A       C       .       PASS    AA=A;DP=92      GT:GQ:DP        0|0:86:28       1|0:65:10       0|1:100:42
+5      136250487       rs17170711      G       A       .       PASS    AA=G;DP=125     GT:GQ:DP        0|0:86:28       1|0:65:19       0|1:100:76
+10     124605923       .       A       C       .       PASS    AA=A;DP=125     GT:GQ:DP        0|0:86:28       1|0:66:27       0|1:100:70
+6      160462528       .       T       A       .       PASS    AA=T;DP=113     GT:GQ:DP        0|0:86:28       1|0:67:18       0|1:100:69
+21     16793050        rs56866176      T       C       .       PASS    AA=T;DP=108     GT:GQ:DP        0|0:86:28       1|0:68:16       0|1:100:66
+1      218323790       rs61830429      A       C       .       PASS    AA=A;DP=106     GT:GQ:DP        0|0:86:28       1|0:69:18       0|1:100:61
+1      3313476 rs2483224       C       T       .       PASS    AA=C;DP=82      GT:GQ:DP        0|0:86:28       1|0:70:11       0|1:100:37
+4      46208985        rs16859440      C       A       .       PASS    AA=C;DP=111     GT:GQ:DP        0|0:86:28       1|0:70:19       0|1:100:63
+10     99165044        .       T       C       .       PASS    AA=T;DP=101     GT:GQ:DP        0|0:86:28       1|0:73:15       0|1:100:47
+4      96103072        .       C       T       .       PASS    AA=C;DP=101     GT:GQ:DP        0|0:86:28       1|0:75:17       0|1:100:55
+4      58384294        rs28401260      T       C       .       PASS    AA=T;DP=104     GT:GQ:DP        0|0:86:28       1|0:76:19       0|1:100:58
+2      223573645       rs12987860      C       T       .       PASS    AA=C;DP=117     GT:GQ:DP        0|0:86:28       1|0:78:17       0|1:100:73
+10     130807778       rs7911741       G       A       .       PASS    AA=G;DP=147     GT:GQ:DP        0|0:86:28       1|0:79:32       0|1:100:85
+20     42821998        .       T       C       .       PASS    AA=N;DP=106     GT:GQ:DP        0|0:86:28       1|0:80:24       0|1:100:53
+15     60578027        rs1661315       T       C       .       PASS    AA=T;DP=118     GT:GQ:DP        0|0:86:28       1|0:82:25       0|1:100:69
+7      155459171       .       C       T       .       PASS    AA=C;DP=97      GT:GQ:DP        0|0:86:28       1|0:83:11       0|1:100:60
+12     87336364        .       A       G       .       PASS    AA=A;DP=118     GT:GQ:DP        0|0:86:28       1|0:83:17       0|1:100:66
+9      110602010       rs12335971      T       C       .       PASS    AA=C;DP=100     GT:GQ:DP        0|0:86:28       1|0:84:19       0|1:100:51
+1      181412213       .       A       G       .       PASS    AA=A;DP=137     GT:GQ:DP        0|0:86:28       1|0:84:24       0|1:100:45
+5      180524278       .       T       C       .       PASS    AA=t;DP=112     GT:GQ:DP        0|0:86:28       1|0:87:25       0|1:100:63
+6      167646669       rs2294233       C       A       .       PASS    AA=C;DP=121     GT:GQ:DP        0|0:86:28       1|0:93:21       0|1:100:67
+12     94116008        rs58434296      C       T       .       PASS    AA=C;DP=139     GT:GQ:DP        0|0:86:28       1|0:96:26       0|1:100:83
+4      79181032        rs17002887      T       C       .       PASS    AA=T;DP=105     GT:GQ:DP        0|0:86:28       1|0:97:20       0|1:100:57
+2      140006405       rs60073629      A       C       .       PASS    AA=A;DP=87      GT:GQ:DP        0|0:86:29       0|1:100:15      0|0:100:36
+5      178624985       rs34799208      C       T       .       PASS    AA=C;DP=102     GT:GQ:DP        0|0:86:29       0|1:100:18      0|0:100:53
+11     19571323        rs7931824       G       A       .       PASS    AA=G;DP=118     GT:GQ:DP        0|0:86:29       0|1:100:19      0|0:100:72
+3      21777974        rs9833020       T       C       .       PASS    AA=T;DP=120     GT:GQ:DP        0|0:86:29       0|1:100:21      0|0:100:70
+14     35819663        rs17104280      G       A       .       PASS    AA=G;DP=116     GT:GQ:DP        0|0:86:29       0|1:100:22      0|0:100:60
+7      96602363        .       A       G       .       PASS    AA=a;DP=118     GT:GQ:DP        0|0:86:29       0|1:100:22      0|0:100:67
+12     29968837        .       G       A       .       PASS    AA=G;DP=116     GT:GQ:DP        0|0:86:29       0|1:100:24      0|0:100:64
+15     69577726        .       C       T       .       PASS    AA=C;DP=123     GT:GQ:DP        0|0:86:29       0|1:100:25      0|0:100:71
+6      154048606       rs6557301       G       A       .       PASS    AA=G;DP=104     GT:GQ:DP        0|0:86:29       0|1:100:27      0|0:100:51
+10     95158397        .       G       A       .       PASS    AA=g;DP=147     GT:GQ:DP        0|0:86:29       0|1:100:27      0|0:100:91
+12     26651511        rs57266547      C       G       .       PASS    AA=C;DP=127     GT:GQ:DP        0|0:86:29       0|1:100:28      0|0:100:70
+4      180742626       rs2920105       T       C       .       PASS    AA=T;DP=128     GT:GQ:DP        0|0:86:29       0|1:100:28      0|0:100:70
+1      236649815       rs10128012      C       T       .       PASS    AA=C;DP=128;HM2 GT:GQ:DP        0|0:86:29       0|1:100:32      0|0:100:66
+15     65117731        rs4776335       G       A       .       PASS    AA=A;DP=143     GT:GQ:DP        0|0:86:29       0|1:100:33      0|0:100:81
+2      221122461       .       C       T       .       PASS    AA=c;DP=90      GT:GQ:DP        0|0:86:29       1|0:100:14      0|1:100:47
+11     43408695        rs7123763       C       T       .       PASS    AA=C;DP=94      GT:GQ:DP        0|0:86:29       1|0:100:15      0|1:100:48
+1      14312487        rs10928013      T       C       .       PASS    AA=C;DP=127;HM2;HM3     GT:GQ:DP        0|0:86:29       1|0:100:16      0|1:100:74
+5      150520248       rs1897531       A       G       .       PASS    AA=A;DP=109     GT:GQ:DP        0|0:86:29       1|0:100:17      0|1:100:63
+13     20159267        rs10507293      T       C       .       PASS    AA=T;DP=123     GT:GQ:DP        0|0:86:29       1|0:100:17      0|1:100:78
+10     103474908       .       A       C       .       PASS    AA=A;DP=109     GT:GQ:DP        0|0:86:29       1|0:100:19      0|1:100:62
+8      47367994        .       C       T       .       PASS    AA=.;DP=119     GT:GQ:DP        0|0:86:29       1|0:100:19      0|1:100:72
+13     24179851        rs6490974       C       T       .       PASS    AA=T;DP=128     GT:GQ:DP        0|0:86:29       1|0:100:19      0|1:100:80
+16     4980574 .       G       C       .       PASS    AA=G;DP=99      GT:GQ:DP        0|0:86:29       1|0:100:20      0|1:100:51
+11     36436365        rs11033637      G       A       .       PASS    AA=G;DP=120     GT:GQ:DP        0|0:86:29       1|0:100:20      0|1:100:71
+8      101675838       rs11997267      C       T       .       PASS    AA=C;DP=119     GT:GQ:DP        0|0:86:29       1|0:100:21      0|1:100:27
+18     45862758        .       A       C       .       PASS    AA=G;DP=117     GT:GQ:DP        0|0:86:29       1|0:100:21      0|1:100:68
+2      212121059       rs61526284      G       C       .       PASS    AA=G;DP=126     GT:GQ:DP        0|0:86:29       1|0:100:21      0|1:100:77
+4      40347972        rs16852422      G       A       .       PASS    AA=G;DP=129     GT:GQ:DP        0|0:86:29       1|0:100:22      0|1:100:37
+7      94398066        .       A       T       .       PASS    AA=A;DP=109     GT:GQ:DP        0|0:86:29       1|0:100:22      0|1:100:60
+4      91115191        rs61558776      G       A       .       PASS    AA=G;DP=114     GT:GQ:DP        0|0:86:29       1|0:100:22      0|1:100:63
+14     33095954        .       T       C       .       PASS    AA=t;DP=117     GT:GQ:DP        0|0:86:29       1|0:100:22      0|1:100:65
+1      207011458       rs17187715      G       C       .       PASS    AA=G;DP=122;HM2 GT:GQ:DP        0|0:86:29       1|0:100:22      0|1:100:71
+6      120262359       rs505838        G       C       .       PASS    AA=G;DP=128     GT:GQ:DP        0|0:86:29       1|0:100:23      0|1:100:37
+6      43204177        rs1537638       T       C       .       PASS    AA=T;DP=148     GT:GQ:DP        0|0:86:29       1|0:100:23      0|1:100:48
+4      78889839        .       G       A       .       PASS    AA=g;DP=112     GT:GQ:DP        0|0:86:29       1|0:100:23      0|1:100:63
+1      92327613        .       A       G       .       PASS    AA=A;DP=131     GT:GQ:DP        0|0:86:29       1|0:100:23      0|1:100:74
+11     50570634        rs8186227       C       T       .       PASS    AA=.;DP=107     GT:GQ:DP        0|0:86:29       1|0:100:24      0|1:100:54
+3      158498336       .       C       T       .       PASS    AA=C;DP=131     GT:GQ:DP        0|0:86:29       1|0:100:24      0|1:100:80
+6      142894022       rs2328347       T       C       .       PASS    AA=C;DP=116     GT:GQ:DP        0|0:86:29       1|0:100:26      0|1:100:60
+4      189774335       .       A       C       .       PASS    AA=a;DP=129     GT:GQ:DP        0|0:86:29       1|0:100:26      0|1:100:76
+18     41543866        rs12964318      G       T       .       PASS    AA=G;DP=135     GT:GQ:DP        0|0:86:29       1|0:100:26      0|1:100:80
+15     78465834        .       G       A       .       PASS    AA=G;DP=143     GT:GQ:DP        0|0:86:29       1|0:100:27      0|1:100:45
+1      107817854       rs3813219       T       C       .       PASS    AA=T;DP=110;HM2 GT:GQ:DP        0|0:86:29       1|0:100:27      0|1:100:56
+3      120644711       .       T       C       .       PASS    AA=T;DP=128     GT:GQ:DP        0|0:86:29       1|0:100:27      0|1:100:75
+6      161720153       .       C       T       .       PASS    AA=c;DP=152     GT:GQ:DP        0|0:86:29       1|0:100:27      0|1:100:96
+2      207861201       rs13408797      G       A       .       PASS    AA=G;DP=127     GT:GQ:DP        0|0:86:29       1|0:100:28      0|1:100:33
+13     45774773        .       G       A       .       PASS    AA=G;DP=109     GT:GQ:DP        0|0:86:29       1|0:100:28      0|1:100:51
+6      34121458        rs9461949       A       G       .       PASS    AA=N;DP=122     GT:GQ:DP        0|0:86:29       1|0:100:28      0|1:100:66
+8      99578604        .       A       G       .       PASS    AA=A;DP=125     GT:GQ:DP        0|0:86:29       1|0:100:28      0|1:100:70
+10     6878853 rs60714489      T       A       .       PASS    AA=T;DP=111     GT:GQ:DP        0|0:86:29       1|0:100:29      0|1:100:57
+6      79007439        rs818232        T       C       .       PASS    AA=T;DP=135     GT:GQ:DP        0|0:86:29       1|0:100:29      0|1:100:80
+3      186908624       .       A       T       .       PASS    AA=A;DP=137     GT:GQ:DP        0|0:86:29       1|0:100:30      0|1:100:77
+16     9637615 rs183406        G       A       .       PASS    AA=G;DP=141     GT:GQ:DP        0|0:86:29       1|0:100:31      0|1:100:82
+16     86877826        rs59410365      G       C       .       PASS    AA=G;DP=154     GT:GQ:DP        0|0:86:29       1|0:100:31      0|1:100:95
+11     3907913 rs7950153       T       C       .       PASS    AA=T;DP=145     GT:GQ:DP        0|0:86:29       1|0:100:33      0|1:100:82
+10     92734845        rs747335        C       A       .       PASS    AA=C;DP=133     GT:GQ:DP        0|0:86:29       1|0:100:41      0|1:100:63
+17     20864607        .       T       A       .       PASS    AA=T;DP=128     GT:GQ:DP        0|0:86:29       1|0:15:13       0|1:100:87
+8      53554613        rs16917909      G       A       .       PASS    AA=G;DP=119     GT:GQ:DP        0|0:86:29       1|0:26:15       0|1:100:78
+1      19070728        rs7366541       T       C       .       PASS    AA=T;DP=93      GT:GQ:DP        0|0:86:29       1|0:28:6        0|1:100:58
+3      96404513        rs6763605       C       A       .       PASS    AA=C;DP=124     GT:GQ:DP        0|0:86:29       1|0:40:23       0|1:100:71
+19     18041413        rs401502        C       G       .       PASS    AA=C;DP=112     GT:GQ:DP        0|0:86:29       1|0:50:12       0|1:100:67
+10     28256590        .       C       T       .       PASS    AA=C;DP=141     GT:GQ:DP        0|0:86:29       1|0:55:26       0|1:100:82
+16     49582381        .       G       C       .       PASS    AA=G;DP=97      GT:GQ:DP        0|0:86:29       1|0:59:12       0|1:100:55
+5      164602953       .       C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        0|0:86:29       1|0:67:20       0|1:100:64
+13     78690837        .       G       T       .       PASS    AA=G;DP=113     GT:GQ:DP        0|0:86:29       1|0:77:17       0|1:100:66
+19     60069037        .       G       C       .       PASS    AA=G;DP=150     GT:GQ:DP        0|0:86:29       1|0:79:30       0|1:100:90
+15     94636399        rs9672759       C       T       .       PASS    AA=C;DP=107     GT:GQ:DP        0|0:86:29       1|0:80:23       0|1:100:57
+2      206290481       .       G       A       .       PASS    AA=G;DP=116     GT:GQ:DP        0|0:86:29       1|0:82:16       0|1:100:75
+5      53941860        rs10461413      G       A       .       PASS    AA=G;DP=141     GT:GQ:DP        0|0:86:29       1|0:83:33       0|1:100:80
+12     60973294        .       C       G       .       PASS    AA=C;DP=127     GT:GQ:DP        0|0:86:29       1|0:86:14       0|1:100:38
+10     24545223        rs56710566      G       T       .       PASS    AA=G;DP=116     GT:GQ:DP        0|0:86:29       1|0:89:24       0|1:100:63
+2      158861178       .       C       T       .       PASS    AA=C;DP=101     GT:GQ:DP        0|0:86:29       1|0:91:14       0|1:100:59
+3      725079  rs7623106       C       G       .       PASS    AA=C;DP=98      GT:GQ:DP        0|0:86:29       1|0:91:16       0|1:100:53
+17     62958355        .       G       A       .       PASS    AA=G;DP=94      GT:GQ:DP        0|0:86:29       1|0:93:14       0|1:100:42
+19     55417267        .       C       T       .       PASS    AA=C;DP=100     GT:GQ:DP        0|0:86:29       1|0:93:22       0|1:100:49
+8      9328256 rs58207704      T       C       .       PASS    AA=C;DP=149     GT:GQ:DP        0|0:86:29       1|0:93:31       0|1:100:90
+15     86672942        .       C       T       .       PASS    AA=C;DP=96      GT:GQ:DP        0|0:86:29       1|0:95:17       0|1:100:39
+12     78126938        .       A       G       .       PASS    AA=A;DP=127     GT:GQ:DP        0|0:86:29       1|0:95:18       0|1:100:82
+4      140701218       rs10019905      C       T       .       PASS    AA=C;DP=101     GT:GQ:DP        0|0:86:29       1|0:96:17       0|1:100:45
+6      94084815        rs56040899      C       T       .       PASS    AA=G;DP=107     GT:GQ:DP        0|0:86:29       1|0:99:18       0|1:100:59
+10     59011008        .       G       C       .       PASS    AA=G;DP=118     GT:GQ:DP        0|0:86:30       0|1:100:18      0|0:100:71
+8      34773617        .       C       T       .       PASS    AA=T;DP=129     GT:GQ:DP        0|0:86:30       0|1:100:19      0|0:100:65
+7      84407660        .       C       T       .       PASS    AA=C;DP=117     GT:GQ:DP        0|0:86:30       0|1:100:21      0|0:100:69
+6      13563968        rs2841564       A       G       .       PASS    AA=G;DP=127     GT:GQ:DP        0|0:86:30       0|1:100:21      0|0:100:74
+9      1190946 rs12341136      G       A       .       PASS    AA=G;DP=140     GT:GQ:DP        0|0:86:30       0|1:100:29      0|0:100:81
+7      158229095       rs2305474       G       A       .       PASS    AA=G;DP=90      GT:GQ:DP        0|0:86:30       1|0:100:13      0|1:100:39
+2      237504448       rs10209117      A       T       .       PASS    AA=A;DP=115     GT:GQ:DP        0|0:86:30       1|0:100:20      0|1:100:67
+18     72066436        rs60535976      G       C       .       PASS    AA=G;DP=112     GT:GQ:DP        0|0:86:30       1|0:100:21      0|1:100:57
+5      9918198 .       G       A       .       PASS    AA=G;DP=135     GT:GQ:DP        0|0:86:30       1|0:100:22      0|1:100:80
+1      209894344       rs3795833       C       T       .       PASS    AA=C;DP=127;HM2 GT:GQ:DP        0|0:86:30       1|0:100:23      0|1:100:73
+12     132085780       rs10735673      G       A       .       PASS    AA=g;DP=126     GT:GQ:DP        0|0:86:30       1|0:100:23      0|1:100:74
+2      23030825        rs11897429      A       G       .       PASS    AA=A;DP=129     GT:GQ:DP        0|0:86:30       1|0:100:23      0|1:100:75
+2      185947852       rs1424528       A       G       .       PASS    AA=a;DP=123     GT:GQ:DP        0|0:86:30       1|0:100:24      0|1:100:65
+15     33297530        rs6495759       T       C       .       PASS    AA=C;DP=121     GT:GQ:DP        0|0:86:30       1|0:100:25      0|1:100:67
+11     132343610       .       G       A       .       PASS    AA=G;DP=126     GT:GQ:DP        0|0:86:30       1|0:100:25      0|1:100:74
+11     114432347       rs2514366       A       G       .       PASS    AA=A;DP=152     GT:GQ:DP        0|0:86:30       1|0:100:26      0|1:100:85
+4      59835953        rs35839351      T       C       .       PASS    AA=C;DP=130     GT:GQ:DP        0|0:86:30       1|0:100:27      0|1:100:75
+5      6715702 rs168713        A       G       .       PASS    AA=A;DP=145     GT:GQ:DP        0|0:86:30       1|0:100:28      0|1:100:89
+2      47249965        .       T       C       .       PASS    AA=T;DP=133     GT:GQ:DP        0|0:86:30       1|0:100:29      0|1:100:75
+2      37838832        .       G       A       .       PASS    AA=g;DP=135     GT:GQ:DP        0|0:86:30       1|0:100:30      0|1:100:63
+12     53799444        rs12301027      T       C       .       PASS    AA=N;DP=80      GT:GQ:DP        0|0:86:30       1|0:22:4        0|1:100:45
+9      128506338       rs7470198       A       T       .       PASS    AA=A;DP=118     GT:GQ:DP        0|0:86:30       1|0:52:10       0|1:100:79
+1      3018895 .       C       T       .       PASS    AA=C;DP=99      GT:GQ:DP        0|0:86:30       1|0:53:11       0|1:100:56
+7      140682500       rs59232884      G       A       .       PASS    AA=G;DP=142     GT:GQ:DP        0|0:86:30       1|0:59:23       0|1:100:90
+3      172298615       rs6772757       C       G       .       PASS    AA=G;DP=105     GT:GQ:DP        0|0:86:30       1|0:62:21       0|1:100:39
+2      116455736       rs10175090      A       T       .       PASS    AA=A;DP=111     GT:GQ:DP        0|0:86:30       1|0:66:17       0|1:100:65
+4      165861939       rs57073929      A       G       .       PASS    AA=a;DP=135     GT:GQ:DP        0|0:86:30       1|0:88:22       0|1:100:83
+10     86339274        rs2488631       G       A       .       PASS    AA=G;DP=125     GT:GQ:DP        0|0:86:30       1|0:90:15       0|1:100:79
+18     18738528        .       C       T       .       PASS    AA=C;DP=109     GT:GQ:DP        0|0:86:31       1|0:100:21      0|1:100:55
+7      52865048        rs11976476      T       C       .       PASS    AA=T;DP=117     GT:GQ:DP        0|0:86:31       1|0:100:23      0|1:100:63
+4      16655862        rs58017250      A       T       .       PASS    AA=A;DP=144     GT:GQ:DP        0|0:86:31       1|0:100:30      0|1:100:43
+10     127151665       rs3910235       G       A       .       PASS    AA=A;DP=117     GT:GQ:DP        0|0:86:32       1|0:100:25      0|1:100:62
+21     34813865        .       T       G       .       PASS    AA=T;DP=104     GT:GQ:DP        0|0:86:32       1|0:87:15       0|1:100:54
+20     31052653        rs6059007       A       G       .       PASS    AA=A;DP=107     GT:GQ:DP        0|0:86:33       1|0:100:28      0|1:100:47
+17     4322944 .       C       T       .       PASS    AA=c;DP=99      GT:GQ:DP        0|0:86:34       0|1:100:20      0|0:100:36
+11     112125174       .       C       T       .       PASS    AA=C;DP=143     GT:GQ:DP        0|0:86:34       0|1:100:20      0|0:100:92
+11     94944049        .       A       G       .       PASS    AA=A;DP=133     GT:GQ:DP        0|0:86:34       1|0:100:21      0|1:100:78
+9      77074160        .       T       C       .       PASS    AA=T;DP=133     GT:GQ:DP        0|0:86:35       0|1:100:33      0|0:100:67
+17     63346064        rs61297499      A       G       .       PASS    AA=A;DP=116     GT:GQ:DP        0|0:86:35       1|0:100:16      0|1:100:67
+7      48907425        rs58583462      C       A       .       PASS    AA=c;DP=112     GT:GQ:DP        0|0:86:35       1|1:45:23       0|1:100:55
+5      54812898        rs992018        A       T       .       PASS    AA=A;DP=131     GT:GQ:DP        0|0:86:35       1|1:70:25       0|1:100:71
+7      158776494       .       A       G       .       PASS    AA=.;DP=180     GT:GQ:DP        0|0:86:36       0|1:100:29      0|0:100:62
+7      123148656       .       C       T       .       PASS    AA=C;DP=108     GT:GQ:DP        0|0:86:36       1|0:93:20       0|1:100:54
+7      64504269        rs10237590      T       C       .       PASS    AA=t;DP=118     GT:GQ:DP        0|0:86:37       1|0:100:25      0|1:100:55
+8      144126554       rs9330408       A       G       .       PASS    AA=A;DP=128     GT:GQ:DP        0|0:86:39       0|1:100:19      0|0:100:71
+10     1508029 rs2820642       C       T       .       PASS    AA=c;DP=133     GT:GQ:DP        0|0:86:39       0|1:100:19      0|0:99:33
+19     4611900 .       C       T       .       PASS    AA=c;DP=132     GT:GQ:DP        0|0:86:39       0|1:100:20      0|0:100:72
+1      210490412       rs351379        G       T       .       PASS    AA=G;DP=140     GT:GQ:DP        0|0:86:39       0|1:100:25      0|0:100:77
+22     34190005        .       G       A       .       PASS    AA=g;DP=154     GT:GQ:DP        0|0:86:39       0|1:100:30      0|0:100:85
+6      39887840        rs3008798       A       C       .       PASS    AA=C;DP=143     GT:GQ:DP        0|0:86:40       1|0:100:20      0|1:100:81
+8      63444867        rs60849905      A       G       .       PASS    AA=A;DP=108     GT:GQ:DP        0|0:86:40       1|0:100:21      0|1:100:48
+12     107146010       rs58134059      G       A       .       PASS    AA=G;DP=155     GT:GQ:DP        0|0:86:40       1|0:100:29      0|1:100:85
+2      80396256        .       G       A       .       PASS    AA=G;DP=150     GT:GQ:DP        0|0:86:40       1|0:100:32      0|1:100:79
+9      91015993        rs7028662       C       T       .       PASS    AA=T;DP=106     GT:GQ:DP        0|0:86:40       1|0:85:19       0|1:100:35
+15     64706763        rs35803900      G       A       .       PASS    AA=g;DP=94      GT:GQ:DP        0|0:87:29       1|1:12:10       0|1:100:57
+19     62705417        rs6650760       T       C       .       PASS    AA=T;DP=116     GT:GQ:DP        0|0:87:29       1|1:17:18       0|1:100:69
+10     124241050       rs2268350       C       T       .       PASS    AA=A;DP=124     GT:GQ:DP        0|0:87:29       1|1:17:22       0|1:100:71
+12     89960652        rs4842515       T       C       .       PASS    AA=T;DP=109     GT:GQ:DP        0|0:87:29       1|1:21:26       0|1:100:56
+4      104673655       rs398340        T       A       .       PASS    AA=A;DP=120     GT:GQ:DP        0|0:87:29       1|1:22:20       0|1:100:69
+9      129944995       .       T       C       .       PASS    AA=t;DP=96      GT:GQ:DP        0|0:87:29       1|1:22:9        0|1:100:59
+3      62527143        .       G       A       .       PASS    AA=A;DP=101     GT:GQ:DP        0|0:87:29       1|1:25:10       0|1:100:61
+4      5154699 rs12511193      G       C       .       PASS    AA=C;DP=116     GT:GQ:DP        0|0:87:29       1|1:25:21       0|1:100:68
+4      132088700       rs10212862      C       A       .       PASS    AA=a;DP=71      GT:GQ:DP        0|0:87:29       1|1:28:11       0|1:100:22
+2      178294854       rs7573820       G       A       .       PASS    AA=A;DP=92      GT:GQ:DP        0|0:87:29       1|1:28:12       0|1:100:49
+13     105700729       rs1325787       G       A       .       PASS    AA=g;DP=98      GT:GQ:DP        0|0:87:29       1|1:28:17       0|1:100:52
+10     133081818       rs4751376       C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        0|0:87:29       1|1:34:13       0|1:100:69
+18     54985812        rs7232466       C       A       .       PASS    AA=C;DP=117     GT:GQ:DP        0|0:87:29       1|1:36:25       0|1:100:64
+1      226037550       rs60156730      G       A       .       PASS    AA=A;DP=101     GT:GQ:DP        0|0:87:29       1|1:37:14       0|1:100:55
+20     57722004        rs6027056       C       T       .       PASS    AA=T;DP=104     GT:GQ:DP        0|0:87:29       1|1:37:14       0|1:100:61
+16     85942546        rs4843601       C       T       .       PASS    AA=T;DP=93      GT:GQ:DP        0|0:87:29       1|1:43:16       0|1:100:39
+13     77714502        rs9544755       G       A       .       PASS    AA=G;DP=101     GT:GQ:DP        0|0:87:29       1|1:43:16       0|1:100:58
+15     83894705        rs6496087       C       A       .       PASS    AA=C;DP=130     GT:GQ:DP        0|0:87:29       1|1:45:26       0|1:100:74
+2      163204719       .       T       C       .       PASS    AA=N;DP=105     GT:GQ:DP        0|0:87:29       1|1:46:17       0|1:100:63
+16     66212455        rs60675008      T       G       .       PASS    AA=T;DP=115     GT:GQ:DP        0|0:87:29       1|1:46:17       0|1:100:66
+14     32175483        rs10130459      T       G       .       PASS    AA=G;DP=113     GT:GQ:DP        0|0:87:29       1|1:46:17       0|1:100:67
+11     130966502       rs2512874       T       C       .       PASS    AA=N;DP=105     GT:GQ:DP        0|0:87:29       1|1:46:18       0|1:100:57
+19     21950007        rs10426971      G       A       .       PASS    AA=G;DP=102     GT:GQ:DP        0|0:87:29       1|1:46:18       0|1:100:57
+6      78868411        rs9448292       G       T       .       PASS    AA=G;DP=104     GT:GQ:DP        0|0:87:29       1|1:47:25       0|1:100:48
+18     10455401        rs479107        T       C       .       PASS    AA=C;DP=141     GT:GQ:DP        0|0:87:29       1|1:48:33       0|1:100:82
+17     73990778        rs8081738       A       G       .       PASS    AA=G;DP=120     GT:GQ:DP        0|0:87:29       1|1:49:18       0|1:100:74
+10     6826051 rs353201        C       T       .       PASS    AA=C;DP=128     GT:GQ:DP        0|0:87:29       1|1:51:25       0|1:100:75
+3      76701124        rs61021976      A       G       .       PASS    AA=A;DP=106     GT:GQ:DP        0|0:87:29       1|1:52:20       0|1:100:57
+2      6534147 rs61102060      G       A       .       PASS    AA=G;DP=134     GT:GQ:DP        0|0:87:29       1|1:52:21       0|1:100:85
+8      132319341       rs6470906       C       G       .       PASS    AA=C;DP=113     GT:GQ:DP        0|0:87:29       1|1:55:20       0|1:100:59
+17     59375940        rs9899194       C       T       .       PASS    AA=C;DP=131     GT:GQ:DP        0|0:87:29       1|1:55:20       0|1:100:80
+8      64496195        rs11775060      C       T       .       PASS    AA=C;DP=140     GT:GQ:DP        0|0:87:29       1|1:55:20       0|1:100:88
+5      3550686 rs12523092      T       C       .       PASS    AA=T;DP=112     GT:GQ:DP        0|0:87:29       1|1:55:21       0|1:100:64
+3      74149147        rs6793236       T       C       .       PASS    AA=T;DP=126     GT:GQ:DP        0|0:87:29       1|1:55:21       0|1:100:77
+1      150887873       rs12090832      C       T       .       PASS    AA=T;DP=128     GT:GQ:DP        0|0:87:29       1|1:58:21       0|1:100:78
+18     49765726        rs9962558       C       G       .       PASS    AA=G;DP=130     GT:GQ:DP        0|0:87:29       1|1:58:21       0|1:100:80
+6      127692809       rs9401949       T       C       .       PASS    AA=T;DP=117     GT:GQ:DP        0|0:87:29       1|1:61:23       0|1:100:63
+21     40050094        rs2837162       T       C       .       PASS    AA=C;DP=128     GT:GQ:DP        0|0:87:29       1|1:61:23       0|1:100:78
+1      151100455       .       A       G       .       PASS    AA=A;DP=124     GT:GQ:DP        0|0:87:29       1|1:64:23       0|1:100:71
+3      97507438        rs2137942       G       T       .       PASS    AA=G;DP=130     GT:GQ:DP        0|0:87:29       1|1:65:31       0|1:100:72
+3      865287  rs6443175       G       A       .       PASS    AA=A;DP=128     GT:GQ:DP        0|0:87:29       1|1:70:25       0|1:100:74
+13     49238286        rs4942865       C       T       .       PASS    AA=C;DP=107     GT:GQ:DP        0|0:87:29       1|1:70:28       0|1:100:52
+2      175182416       .       G       A       .       PASS    AA=G;DP=151     GT:GQ:DP        0|0:87:29       1|1:70:32       0|1:100:41
+2      150033087       rs1196659       G       C       .       PASS    AA=g;DP=121     GT:GQ:DP        0|0:87:29       1|1:73:26       0|1:100:65
+9      120628588       rs1359678       T       A       .       PASS    AA=A;DP=132     GT:GQ:DP        0|0:87:29       1|1:73:26       0|1:100:76
+2      159376612       rs6720329       G       A       .       PASS    AA=G;DP=120     GT:GQ:DP        0|0:87:29       1|1:73:28       0|1:100:61
+8      127923641       rs10956330      C       T       .       PASS    AA=T;DP=137     GT:GQ:DP        0|0:87:29       1|1:79:28       0|1:100:83
+1      168032922       rs10800478      G       T       .       PASS    AA=G;DP=118;HM2 GT:GQ:DP        0|0:87:29       1|1:85:30       0|1:100:59
+11     92312449        rs2895443       G       A       .       PASS    AA=A;DP=122     GT:GQ:DP        0|0:87:29       1|1:85:30       0|1:100:64
+1      216153953       rs12081724      G       A       .       PASS    AA=A;DP=138;HM2;HM3     GT:GQ:DP        0|0:87:29       1|1:94:33       0|1:100:76
+5      97419988        rs257212        C       T       .       PASS    AA=C;DP=80      GT:GQ:DP        0|0:87:30       1|1:12:12       0|1:100:38
+6      85968625        rs9351040       C       T       .       PASS    AA=T;DP=116     GT:GQ:DP        0|0:87:30       1|1:31:14       0|1:100:50
+3      110947041       .       G       A       .       PASS    AA=G;DP=89      GT:GQ:DP        0|0:87:30       1|1:34:13       0|1:100:46
+3      176206004       rs11720920      A       T       .       PASS    AA=T;DP=110     GT:GQ:DP        0|0:87:30       1|1:34:19       0|1:100:59
+22     47260367        rs5767169       G       A       .       PASS    AA=N;DP=107     GT:GQ:DP        0|0:87:30       1|1:37:14       0|1:100:51
+1      209121456       rs9661232       T       C       .       PASS    AA=T;DP=125     GT:GQ:DP        0|0:87:30       1|1:39:21       0|1:100:75
+12     122631427       rs7972380       C       G       .       PASS    AA=c;DP=100     GT:GQ:DP        0|0:87:30       1|1:40:20       0|1:100:53
+4      118389480       rs4485866       C       G       .       PASS    AA=C;DP=124     GT:GQ:DP        0|0:87:30       1|1:41:18       0|1:100:76
+14     33385284        rs7146033       T       C       .       PASS    AA=T;DP=138     GT:GQ:DP        0|0:87:30       1|1:46:18       0|1:100:46
+2      238203295       rs4663764       C       G       .       PASS    AA=G;DP=132     GT:GQ:DP        0|0:87:30       1|1:49:20       0|1:100:79
+10     94169222        rs11813643      C       A       .       PASS    AA=T;DP=145     GT:GQ:DP        0|0:87:30       1|1:52:19       0|1:100:97
+1      192168129       rs574986        A       G       .       PASS    AA=A;DP=120;HM2 GT:GQ:DP        0|0:87:30       1|1:55:20       0|1:100:71
+4      43425801        rs7340999       C       T       .       PASS    AA=T;DP=100     GT:GQ:DP        0|0:87:30       1|1:61:22       0|1:100:48
+6      1167588 rs238035        C       T       .       PASS    AA=c;DP=118     GT:GQ:DP        0|0:87:30       1|1:64:23       0|1:100:66
+13     51427834        rs61406624      G       A       .       PASS    AA=G;DP=138     GT:GQ:DP        0|0:87:30       1|1:64:25       0|1:100:83
+18     69662157        rs4891525       T       C       .       PASS    AA=C;DP=147     GT:GQ:DP        0|0:87:30       1|1:67:26       0|1:100:45
+18     2154877 rs645816        G       A       .       PASS    AA=G;DP=145     GT:GQ:DP        0|0:87:30       1|1:67:30       0|1:100:84
+6      144332412       rs9376801       T       C       .       PASS    AA=t;DP=102     GT:GQ:DP        0|0:87:30       1|1:6:20        0|1:100:52
+13     49096164        rs28548226      A       G       .       PASS    AA=A;DP=163     GT:GQ:DP        0|0:87:30       1|1:73:27       0|1:100:106
+12     114558847       rs12231583      T       A       .       PASS    AA=T;DP=149     GT:GQ:DP        0|0:87:30       1|1:76:27       0|1:100:94
+13     109339779       .       T       G       .       PASS    AA=T;DP=124     GT:GQ:DP        0|0:87:30       1|1:79:28       0|1:100:59
+4      117810293       rs10026221      T       C       .       PASS    AA=T;DP=135     GT:GQ:DP        0|0:87:30       1|1:91:33       0|1:100:69
+8      56052882        rs35494277      C       T       .       PASS    AA=C;DP=113     GT:GQ:DP        0|0:87:31       1|1:10:12       0|1:100:71
+12     104370386       rs11615511      G       C       .       PASS    AA=C;DP=152     GT:GQ:DP        0|0:87:31       1|1:49:25       0|1:100:98
+4      90193745        rs1795727       C       T       .       PASS    AA=T;DP=126     GT:GQ:DP        0|0:87:31       1|1:50:24       0|1:100:73
+12     4980499 .       T       C       .       PASS    AA=T;DP=138     GT:GQ:DP        0|0:87:32       1|0:100:20      0|1:100:85
+4      167427445       .       C       A       .       PASS    AA=C;DP=118     GT:GQ:DP        0|0:87:32       1|1:34:13       0|1:100:32
+9      25765262        rs10967072      C       A       .       PASS    AA=C;DP=107     GT:GQ:DP        0|0:87:33       0|1:100:22      0|0:100:52
+1      14520974        rs16853943      G       T       .       PASS    AA=T;DP=121;HM2;HM3     GT:GQ:DP        0|0:87:33       0|1:100:30      0|0:100:56
+10     106600237       rs59447605      C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        0|0:87:33       1|0:87:17       0|1:100:60
+17     74753789        rs11650154      A       G       .       PASS    AA=A;DP=142     GT:GQ:DP        0|0:87:33       1|1:52:20       0|1:100:49
+6      591472  rs846159        G       A       .       PASS    AA=A;DP=129     GT:GQ:DP        0|0:87:34       0|1:100:20      0|0:100:77
+4      175070266       .       G       A       .       PASS    AA=G;DP=151     GT:GQ:DP        0|0:87:34       0|1:100:30      0|0:100:45
+2      127547079       rs753429        A       G       .       PASS    AA=G;DP=95      GT:GQ:DP        0|0:87:34       1|1:37:16       0|1:100:39
+2      217490750       .       C       T       .       PASS    AA=C;DP=129     GT:GQ:DP        0|0:87:35       0|1:100:20      0|0:100:72
+2      54690507        .       A       G       .       PASS    AA=A;DP=111     GT:GQ:DP        0|0:87:35       1|1:46:17       0|1:100:55
+6      50633333        .       G       A       .       PASS    AA=G;DP=112     GT:GQ:DP        0|0:87:36       0|1:100:19      0|0:100:58
+17     60915873        .       T       A       .       PASS    AA=T;DP=121     GT:GQ:DP        0|0:87:36       0|1:100:20      0|0:100:64
+3      179294993       rs7645389       C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        0|0:87:36       0|1:100:27      0|0:100:53
+8      3139801 .       T       C       .       PASS    AA=T;DP=133     GT:GQ:DP        0|0:87:36       1|0:100:19      0|1:100:79
+21     42363322        rs220271        C       T       .       PASS    AA=C;DP=126     GT:GQ:DP        0|0:87:36       1|0:100:23      0|1:100:69
+14     59201114        rs10148684      T       G       .       PASS    AA=T;DP=132     GT:GQ:DP        0|0:87:36       1|1:85:30       0|1:100:60
+4      103764363       .       T       A       .       PASS    AA=T;DP=121     GT:GQ:DP        0|0:87:37       1|0:100:18      0|1:100:66
+22     37063834        .       C       T       .       PASS    AA=c;DP=127     GT:GQ:DP        0|0:87:37       1|0:100:23      0|1:100:66
+10     25004572        .       A       C       .       PASS    AA=A;DP=157     GT:GQ:DP        0|0:87:37       1|0:100:25      0|1:100:52
+7      35655803        .       A       T       .       PASS    AA=a;DP=114     GT:GQ:DP        0|0:87:37       1|0:100:27      0|1:100:38
+5      113442170       .       G       T       .       PASS    AA=G;DP=152     GT:GQ:DP        0|0:87:37       1|0:100:35      0|1:100:80
+6      152368508       rs55839858      A       C       .       PASS    AA=A;DP=145     GT:GQ:DP        0|0:87:37       1|0:100:38      0|1:100:69
+9      138032016       rs10858197      C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        0|0:87:37       1|0:68:18       0|1:100:62
+2      118197307       rs35480906      T       A       .       PASS    AA=T;DP=145     GT:GQ:DP        0|0:87:38       0|1:100:31      0|0:100:77
+11     107116772       .       C       G       .       PASS    AA=c;DP=148     GT:GQ:DP        0|0:87:39       0|1:100:24      0|0:100:39
+9      71454413        rs7049167       G       A       .       PASS    AA=A;DP=147     GT:GQ:DP        0|0:87:41       1|1:19:19       0|1:100:85
+11     130280898       rs3198419       C       T       .       PASS    AA=C;DP=136     GT:GQ:DP        0|0:87:41       1|1:40:21       0|1:100:64
+17     51321621        .       G       T       .       PASS    AA=G;DP=146     GT:GQ:DP        0|0:87:41       1|1:79:37       0|1:100:66
+9      27027802        .       T       C       .       PASS    AA=T;DP=138     GT:GQ:DP        0|0:87:42       0|1:100:27      0|0:100:67
+22     45486452        rs2111399       C       A       .       PASS    AA=C;DP=95      GT:GQ:DP        0|0:88:29       1|0:87:10       0|1:100:56
+12     46427065        .       C       T       .       PASS    AA=C;DP=123     GT:GQ:DP        0|0:88:30       1|0:87:18       0|1:100:76
+18     35033179        rs8096947       C       A       .       PASS    AA=C;DP=121     GT:GQ:DP        0|0:88:32       0|1:100:23      0|0:100:66
+9      137904226       .       T       C       .       PASS    AA=C;DP=122     GT:GQ:DP        0|0:88:33       1|0:100:26      0|1:100:62
+4      25355368        rs11937148      G       A       .       PASS    AA=G;DP=120     GT:GQ:DP        0|0:88:34       0|1:100:20      0|0:100:65
+12     126050994       .       G       A       .       PASS    AA=G;DP=142     GT:GQ:DP        0|0:88:34       0|1:100:21      0|0:100:87
+9      9587402 rs56900747      C       A       .       PASS    AA=C;DP=112     GT:GQ:DP        0|0:88:34       0|1:100:22      0|0:100:55
+6      43941897        .       G       A       .       PASS    AA=G;DP=113     GT:GQ:DP        0|0:88:34       0|1:100:22      0|0:100:58
+7      133694930       rs28448472      G       T       .       PASS    AA=G;DP=157     GT:GQ:DP        0|0:88:34       0|1:100:35      0|0:100:86
+14     39934447        rs2210311       C       T       .       PASS    AA=C;DP=148     GT:GQ:DP        0|0:88:34       0|1:100:37      0|0:100:80
+20     44789055        rs61516789      C       T       .       PASS    AA=C;DP=113     GT:GQ:DP        0|0:88:34       1|0:72:16       0|1:100:62
+11     34485754        rs12418222      G       A       .       PASS    AA=A;DP=135     GT:GQ:DP        0|0:88:35       0|1:100:28      0|0:100:75
+3      141597620       .       C       T       .       PASS    AA=T;DP=156     GT:GQ:DP        0|0:88:35       0|1:100:32      0|0:100:71
+14     64349829        rs1741464       C       A       .       PASS    AA=A;DP=110     GT:GQ:DP        0|0:88:35       1|0:100:19      0|1:100:57
+11     83084068        rs11820299      T       A       .       PASS    AA=T;DP=137     GT:GQ:DP        0|0:88:35       1|0:100:21      0|1:100:81
+18     66283149        .       C       G       .       PASS    AA=C;DP=92      GT:GQ:DP        0|0:88:37       1|0:100:16      0|1:100:36
+21     17993646        rs7275866       A       C       .       PASS    AA=A;DP=156     GT:GQ:DP        0|0:88:37       1|1:33:24       0|1:100:91
+6      167240061       rs60913241      C       G       .       PASS    AA=c;DP=126     GT:GQ:DP        0|0:88:37       1|1:61:23       0|1:100:67
+13     70361164        rs57953328      T       A       .       PASS    AA=T;DP=148     GT:GQ:DP        0|0:88:38       1|0:100:30      0|1:100:77
+3      24572458        rs17014812      G       A       .       PASS    AA=G;DP=147     GT:GQ:DP        0|0:88:38       1|1:70:25       0|1:100:81
+1      218675560       rs60843898      T       C       .       PASS    AA=C;DP=132     GT:GQ:DP        0|0:88:41       1|0:96:27       0|1:100:64
+8      11604785        rs7817412       A       C       .       PASS    AA=A;DP=109     GT:GQ:DP        0|0:88:41       1|1:43:16       0|1:100:53
+20     57579177        rs4812101       A       C       .       PASS    AA=C;DP=123     GT:GQ:DP        0|0:88:42       1|0:91:12       0|1:100:69
+7      1108451 rs10262232      C       A       .       PASS    AA=C;DP=107     GT:GQ:DP        0|0:89:28       0|1:100:11      0|0:100:56
+16     5594414 .       T       C       .       PASS    AA=T;DP=112     GT:GQ:DP        0|0:89:28       0|1:100:12      0|0:100:75
+8      90554069        .       G       A       .       PASS    AA=G;DP=86      GT:GQ:DP        0|0:89:28       0|1:100:13      0|0:100:43
+3      32306976        rs6796415       A       C       .       PASS    AA=A;DP=105     GT:GQ:DP        0|0:89:28       0|1:100:13      0|0:100:66
+2      158239233       rs6742271       A       G       .       PASS    AA=A;DP=108     GT:GQ:DP        0|0:89:28       0|1:100:13      0|0:100:68
+15     31113491        rs345878        C       T       .       PASS    AA=C;DP=126     GT:GQ:DP        0|0:89:28       0|1:100:13      0|0:100:83
+4      184611249       rs11735094      T       A       .       PASS    AA=T;DP=109     GT:GQ:DP        0|0:89:28       0|1:100:14      0|0:100:72
+5      178043240       rs61486540      A       C       .       PASS    AA=a;DP=117     GT:GQ:DP        0|0:89:28       0|1:100:14      0|0:81:27
+3      190741599       .       T       A       .       PASS    AA=T;DP=101     GT:GQ:DP        0|0:89:28       0|1:100:15      0|0:100:52
+9      15025992        .       G       A       .       PASS    AA=G;DP=101     GT:GQ:DP        0|0:89:28       0|1:100:15      0|0:100:59
+22     26044273        .       C       T       .       PASS    AA=C;DP=122     GT:GQ:DP        0|0:89:28       0|1:100:15      0|0:100:80
+6      135198050       .       C       T       .       PASS    AA=C;DP=131     GT:GQ:DP        0|0:89:28       0|1:100:15      0|0:100:89
+13     101924799       rs4471544       C       T       .       PASS    AA=C;DP=106     GT:GQ:DP        0|0:89:28       0|1:100:15      0|0:78:26
+3      67513585        rs62256368      T       G       .       PASS    AA=T;DP=127     GT:GQ:DP        0|0:89:28       0|1:100:15      0|0:85:40
+2      42561262        .       G       A       .       PASS    AA=g;DP=101     GT:GQ:DP        0|0:89:28       0|1:100:16      0|0:100:54
+18     42900186        rs2576032       T       C       .       PASS    AA=T;DP=110     GT:GQ:DP        0|0:89:28       0|1:100:16      0|0:100:64
+3      61576297        .       A       G       .       PASS    AA=A;DP=108     GT:GQ:DP        0|0:89:28       0|1:100:16      0|0:100:64
+8      30793912        .       T       C       .       PASS    AA=T;DP=107     GT:GQ:DP        0|0:89:28       0|1:100:16      0|0:100:64
+5      174391182       rs57226159      C       A       .       PASS    AA=c;DP=111     GT:GQ:DP        0|0:89:28       0|1:100:16      0|0:100:65
+2      50947484        .       T       C       .       PASS    AA=T;DP=120     GT:GQ:DP        0|0:89:28       0|1:100:16      0|0:100:67
+11     114484408       .       T       C       .       PASS    AA=T;DP=115     GT:GQ:DP        0|0:89:28       0|1:100:16      0|0:96:32
+14     87761496        .       T       A       .       PASS    AA=T;DP=97      GT:GQ:DP        0|0:89:28       0|1:100:17      0|0:100:34
+12     110812759       .       G       A       .       PASS    AA=G;DP=122     GT:GQ:DP        0|0:89:28       0|1:100:17      0|0:100:35
+6      132547957       .       C       T       .       PASS    AA=C;DP=89      GT:GQ:DP        0|0:89:28       0|1:100:17      0|0:100:46
+6      124592633       .       T       C       .       PASS    AA=T;DP=102     GT:GQ:DP        0|0:89:28       0|1:100:17      0|0:100:56
+12     50830500        rs7299799       C       T       .       PASS    AA=C;DP=107     GT:GQ:DP        0|0:89:28       0|1:100:17      0|0:100:62
+15     37723368        .       T       C       .       PASS    AA=T;DP=115     GT:GQ:DP        0|0:89:28       0|1:100:17      0|0:100:71
+10     72108547        rs10823596      G       A       .       PASS    AA=N;DP=132     GT:GQ:DP        0|0:89:28       0|1:100:17      0|0:100:88
+16     48620591        rs9941357       A       T       .       PASS    AA=A;DP=87      GT:GQ:DP        0|0:89:28       0|1:100:18      0|0:100:38
+12     90148646        .       A       T       .       PASS    AA=T;DP=87      GT:GQ:DP        0|0:89:28       0|1:100:18      0|0:100:40
+16     6385377 rs17140128      C       A       .       PASS    AA=C;DP=87      GT:GQ:DP        0|0:89:28       0|1:100:18      0|0:100:42
+5      67172551        rs10042954      C       T       .       PASS    AA=T;DP=128     GT:GQ:DP        0|0:89:28       0|1:100:18      0|0:100:44
+9      120324282       rs10984076      A       G       .       PASS    AA=G;DP=148     GT:GQ:DP        0|0:89:28       0|1:100:18      0|0:100:51
+10     55378163        .       T       G       .       PASS    AA=T;DP=105     GT:GQ:DP        0|0:89:28       0|1:100:18      0|0:100:60
+3      18487883        rs2304763       C       T       .       PASS    AA=T;DP=124     GT:GQ:DP        0|0:89:28       0|1:100:18      0|0:100:66
+5      169801671       .       G       A       .       PASS    AA=G;DP=118     GT:GQ:DP        0|0:89:28       0|1:100:18      0|0:100:73
+1      22744300        rs209713        G       A       .       PASS    AA=G;DP=123;HM3 GT:GQ:DP        0|0:89:28       0|1:100:18      0|0:100:77
+8      8894201 .       T       G       .       PASS    AA=T;DP=115     GT:GQ:DP        0|0:89:28       0|1:100:18      0|0:96:32
+19     42978416        rs62110188      C       T       .       PASS    AA=c;DP=137     GT:GQ:DP        0|0:89:28       0|1:100:19      0|0:100:39
+1      148355165       .       T       C       .       PASS    AA=C;DP=98      GT:GQ:DP        0|0:89:28       0|1:100:19      0|0:100:50
+5      7935916 rs10040859      A       G       .       PASS    AA=A;DP=149     GT:GQ:DP        0|0:89:28       0|1:100:19      0|0:100:51
+2      180146720       .       G       A       .       PASS    AA=A;DP=99      GT:GQ:DP        0|0:89:28       0|1:100:19      0|0:100:52
+16     86990028        rs9972827       A       T       .       PASS    AA=A;DP=141     GT:GQ:DP        0|0:89:28       0|1:100:19      0|0:100:55
+13     50082040        rs1861297       T       C       .       PASS    AA=T;DP=114     GT:GQ:DP        0|0:89:28       0|1:100:19      0|0:100:62
+22     49373670        .       T       C       .       PASS    AA=T;DP=110     GT:GQ:DP        0|0:89:28       0|1:100:19      0|0:100:66
+5      106613253       .       T       A       .       PASS    AA=T;DP=117     GT:GQ:DP        0|0:89:28       0|1:100:19      0|0:100:73
+9      106131500       .       G       T       .       PASS    AA=G;DP=123     GT:GQ:DP        0|0:89:28       0|1:100:19      0|0:100:77
+5      33669529        rs4866405       G       C       .       PASS    AA=C;DP=124     GT:GQ:DP        0|0:89:28       0|1:100:19      0|0:100:79
+7      11642023        rs16877006      T       C       .       PASS    AA=T;DP=127     GT:GQ:DP        0|0:89:28       0|1:100:19      0|0:100:79
+15     65621559        rs57892823      T       C       .       PASS    AA=T;DP=138     GT:GQ:DP        0|0:89:28       0|1:100:20      0|0:100:40
+8      41084027        .       T       C       .       PASS    AA=T;DP=98      GT:GQ:DP        0|0:89:28       0|1:100:20      0|0:100:51
+13     103103937       .       G       A       .       PASS    AA=G;DP=114     GT:GQ:DP        0|0:89:28       0|1:100:20      0|0:100:69
+21     36059487        rs2835138       C       A       .       PASS    AA=C;DP=122     GT:GQ:DP        0|0:89:28       0|1:100:20      0|0:100:75
+7      135578487       rs61308262      C       T       .       PASS    AA=C;DP=124     GT:GQ:DP        0|0:89:28       0|1:100:20      0|0:100:76
+18     18266035        rs6507155       C       T       .       PASS    AA=C;DP=93      GT:GQ:DP        0|0:89:28       0|1:100:21      0|0:100:45
+5      131841990       rs7719499       C       G       .       PASS    AA=G;DP=161     GT:GQ:DP        0|0:89:28       0|1:100:21      0|0:100:60
+3      79393436        .       T       C       .       PASS    AA=T;DP=113     GT:GQ:DP        0|0:89:28       0|1:100:21      0|0:100:67
+10     2190238 rs4880978       G       T       .       PASS    AA=G;DP=122     GT:GQ:DP        0|0:89:28       0|1:100:21      0|0:100:70
+6      149291597       .       C       T       .       PASS    AA=C;DP=118     GT:GQ:DP        0|0:89:28       0|1:100:21      0|0:100:70
+22     19451102        .       G       A       .       PASS    AA=G;DP=125     GT:GQ:DP        0|0:89:28       0|1:100:21      0|0:100:79
+7      36600327        .       C       A       .       PASS    AA=C;DP=149     GT:GQ:DP        0|0:89:28       0|1:100:21      0|0:100:98
+8      88693941        .       A       G       .       PASS    AA=A;DP=98      GT:GQ:DP        0|0:89:28       0|1:100:22      0|0:100:45
+6      150821541       rs17079757      C       T       .       PASS    AA=C;DP=141     GT:GQ:DP        0|0:89:28       0|1:100:22      0|0:100:48
+7      80025352        rs59068651      A       G       .       PASS    AA=A;DP=101     GT:GQ:DP        0|0:89:28       0|1:100:22      0|0:100:50
+20     14977001        .       C       T       .       PASS    AA=C;DP=150     GT:GQ:DP        0|0:89:28       0|1:100:22      0|0:100:51
+2      142284951       rs17815364      A       C       .       PASS    AA=A;DP=119     GT:GQ:DP        0|0:89:28       0|1:100:22      0|0:100:55
+3      72031489        rs1995453       T       C       .       PASS    AA=T;DP=110     GT:GQ:DP        0|0:89:28       0|1:100:22      0|0:100:62
+6      133936724       rs6912223       G       C       .       PASS    AA=C;DP=111     GT:GQ:DP        0|0:89:28       0|1:100:22      0|0:100:62
+4      109480246       rs9997202       G       A       .       PASS    AA=G;DP=112     GT:GQ:DP        0|0:89:28       0|1:100:22      0|0:100:63
+3      111869246       rs4431139       C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        0|0:89:28       0|1:100:22      0|0:100:72
+8      124350504       .       G       A       .       PASS    AA=A;DP=130     GT:GQ:DP        0|0:89:28       0|1:100:22      0|0:100:81
+3      163317240       .       C       T       .       PASS    AA=C;DP=86      GT:GQ:DP        0|0:89:28       0|1:100:22      0|0:96:32
+7      22444032        rs7458118       T       C       .       PASS    AA=T;DP=95      GT:GQ:DP        0|0:89:28       0|1:100:23      0|0:100:46
+22     24621757        rs13057846      G       A       .       PASS    AA=A;DP=153     GT:GQ:DP        0|0:89:28       0|1:100:23      0|0:100:47
+7      82280954        .       T       G       .       PASS    AA=T;DP=112     GT:GQ:DP        0|0:89:28       0|1:100:23      0|0:100:48
+18     65910529        rs4891394       C       A       .       PASS    AA=C;DP=100     GT:GQ:DP        0|0:89:28       0|1:100:23      0|0:100:50
+1      161431888       rs4656388       G       T       .       PASS    AA=T;DP=103;HM2 GT:GQ:DP        0|0:89:28       0|1:100:23      0|0:100:53
+1      156700714       rs9651046       G       T       .       PASS    AA=G;DP=110;HM2 GT:GQ:DP        0|0:89:28       0|1:100:23      0|0:100:57
+7      49599837        rs9642306       G       A       .       PASS    AA=A;DP=111     GT:GQ:DP        0|0:89:28       0|1:100:23      0|0:100:58
+16     54691837        rs2111111       T       C       .       PASS    AA=T;DP=110     GT:GQ:DP        0|0:89:28       0|1:100:23      0|0:100:59
+7      102989563       .       C       T       .       PASS    AA=C;DP=113     GT:GQ:DP        0|0:89:28       0|1:100:23      0|0:100:62
+4      167684557       .       A       C       .       PASS    AA=A;DP=111     GT:GQ:DP        0|0:89:28       0|1:100:23      0|0:100:64
+4      88440215        rs59054114      G       A       .       PASS    AA=G;DP=115     GT:GQ:DP        0|0:89:28       0|1:100:23      0|0:100:65
+9      38279034        .       A       G       .       PASS    AA=A;DP=117     GT:GQ:DP        0|0:89:28       0|1:100:23      0|0:100:66
+16     76927220        .       T       C       .       PASS    AA=T;DP=125     GT:GQ:DP        0|0:89:28       0|1:100:23      0|0:100:75
+13     75269360        .       C       T       .       PASS    AA=C;DP=130     GT:GQ:DP        0|0:89:28       0|1:100:23      0|0:100:78
+10     96848964        .       C       T       .       PASS    AA=C;DP=136     GT:GQ:DP        0|0:89:28       0|1:100:23      0|0:100:84
+14     88935121        rs17125841      C       T       .       PASS    AA=C;DP=140     GT:GQ:DP        0|0:89:28       0|1:100:23      0|0:100:87
+10     31350189        rs2797909       C       T       .       PASS    AA=C;DP=94      GT:GQ:DP        0|0:89:28       0|1:100:24      0|0:100:43
+6      6107791 .       G       T       .       PASS    AA=C;DP=108     GT:GQ:DP        0|0:89:28       0|1:100:24      0|0:100:44
+15     20558425        rs17806422      T       G       .       PASS    AA=T;DP=108     GT:GQ:DP        0|0:89:28       0|1:100:24      0|0:100:57
+13     87197221        .       G       A       .       PASS    AA=G;DP=114     GT:GQ:DP        0|0:89:28       0|1:100:24      0|0:100:62
+14     52718511        .       A       G       .       PASS    AA=A;DP=168     GT:GQ:DP        0|0:89:28       0|1:100:24      0|0:100:62
+2      4385872 rs62118136      G       A       .       PASS    AA=G;DP=120     GT:GQ:DP        0|0:89:28       0|1:100:24      0|0:100:63
+14     56487021        rs7154113       C       A       .       PASS    AA=C;DP=122     GT:GQ:DP        0|0:89:28       0|1:100:24      0|0:100:71
+9      125864320       rs10118906      G       A       .       PASS    AA=G;DP=121     GT:GQ:DP        0|0:89:28       0|1:100:24      0|0:100:71
+4      150098032       .       T       A       .       PASS    AA=T;DP=125     GT:GQ:DP        0|0:89:28       0|1:100:24      0|0:100:74
+15     88698484        rs7182544       G       C       .       PASS    AA=g;DP=126     GT:GQ:DP        0|0:89:28       0|1:100:24      0|0:100:75
+15     71470787        .       G       C       .       PASS    AA=G;DP=128     GT:GQ:DP        0|0:89:28       0|1:100:24      0|0:100:76
+14     25155552        .       G       T       .       PASS    AA=G;DP=131     GT:GQ:DP        0|0:89:28       0|1:100:24      0|0:100:79
+10     53326320        rs12220804      A       C       .       PASS    AA=A;DP=104     GT:GQ:DP        0|0:89:28       0|1:100:25      0|0:100:36
+10     16897856        rs11812984      C       T       .       PASS    AA=A;DP=137     GT:GQ:DP        0|0:89:28       0|1:100:25      0|0:100:46
+17     48202865        rs4395119       G       T       .       PASS    AA=T;DP=151     GT:GQ:DP        0|0:89:28       0|1:100:25      0|0:100:58
+5      84840502        rs447288        C       T       .       PASS    AA=t;DP=121     GT:GQ:DP        0|0:89:28       0|1:100:25      0|0:100:69
+6      153839767       .       A       G       .       PASS    AA=A;DP=121     GT:GQ:DP        0|0:89:28       0|1:100:25      0|0:100:69
+13     72401008        rs9573067       C       T       .       PASS    AA=T;DP=124     GT:GQ:DP        0|0:89:28       0|1:100:25      0|0:100:70
+10     72923373        .       G       T       .       PASS    AA=T;DP=127     GT:GQ:DP        0|0:89:28       0|1:100:25      0|0:100:72
+12     32500608        rs2047643       A       T       .       PASS    AA=A;DP=126     GT:GQ:DP        0|0:89:28       0|1:100:25      0|0:100:73
+3      105220156       .       T       A       .       PASS    AA=T;DP=127     GT:GQ:DP        0|0:89:28       0|1:100:25      0|0:100:77
+5      121210733       rs56122584      T       A       .       PASS    AA=T;DP=129     GT:GQ:DP        0|0:89:28       0|1:100:25      0|0:100:78
+6      168843768       .       T       C       .       PASS    AA=T;DP=134     GT:GQ:DP        0|0:89:28       0|1:100:25      0|0:100:82
+3      14586403        rs1879220       C       G       .       PASS    AA=C;DP=152     GT:GQ:DP        0|0:89:28       0|1:100:26      0|0:100:53
+4      178742210       rs34730737      A       G       .       PASS    AA=A;DP=114     GT:GQ:DP        0|0:89:28       0|1:100:26      0|0:100:61
+15     55178243        .       A       C       .       PASS    AA=A;DP=123     GT:GQ:DP        0|0:89:28       0|1:100:26      0|0:100:69
+12     66787721        rs723403        A       G       .       PASS    AA=A;DP=131     GT:GQ:DP        0|0:89:28       0|1:100:26      0|0:100:73
+1      222017877       rs10465524      G       A       .       PASS    AA=G;DP=127;HM2;HM3     GT:GQ:DP        0|0:89:28       0|1:100:26      0|0:100:75
+2      163399961       rs10180917      T       A       .       PASS    AA=A;DP=135     GT:GQ:DP        0|0:89:28       0|1:100:26      0|0:69:23
+13     61198995        rs17060246      G       T       .       PASS    AA=N;DP=142     GT:GQ:DP        0|0:89:28       0|1:100:27      0|0:100:39
+3      132862838       .       A       G       .       PASS    AA=A;DP=108     GT:GQ:DP        0|0:89:28       0|1:100:27      0|0:100:54
+7      44359094        .       C       A       .       PASS    AA=C;DP=122     GT:GQ:DP        0|0:89:28       0|1:100:27      0|0:100:68
+8      121686795       rs4514024       A       G       .       PASS    AA=A;DP=126     GT:GQ:DP        0|0:89:28       0|1:100:27      0|0:100:70
+3      184791863       rs7643540       C       A       .       PASS    AA=C;DP=129     GT:GQ:DP        0|0:89:28       0|1:100:27      0|0:100:78
+12     39972696        .       C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        0|0:89:28       0|1:100:28      0|0:100:58
+17     51244136        rs4129589       C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        0|0:89:28       0|1:100:28      0|0:100:58
+6      163741042       rs9689061       C       T       .       PASS    AA=C;DP=122     GT:GQ:DP        0|0:89:28       0|1:100:28      0|0:100:66
+1      234643749       rs16833650      C       T       .       PASS    AA=C;DP=125;HM2 GT:GQ:DP        0|0:89:28       0|1:100:28      0|0:100:71
+17     3990617 rs28447233      G       A       .       PASS    AA=g;DP=131     GT:GQ:DP        0|0:89:28       0|1:100:28      0|0:100:78
+12     15391303        rs11056436      C       T       .       PASS    AA=T;DP=134     GT:GQ:DP        0|0:89:28       0|1:100:28      0|0:100:81
+8      13473233        .       A       C       .       PASS    AA=A;DP=135     GT:GQ:DP        0|0:89:28       0|1:100:28      0|0:100:82
+16     55443610        rs12445993      C       G       .       PASS    AA=C;DP=141     GT:GQ:DP        0|0:89:28       0|1:100:28      0|0:100:87
+22     21114679        .       C       T       .       PASS    AA=.;DP=109     GT:GQ:DP        0|0:89:28       0|1:100:29      0|0:100:54
+5      148015432       rs34598101      G       C       .       PASS    AA=C;DP=117     GT:GQ:DP        0|0:89:28       0|1:100:29      0|0:100:57
+1      87679879        .       C       A       .       PASS    AA=C;DP=117     GT:GQ:DP        0|0:89:28       0|1:100:29      0|0:100:59
+6      100377852       .       C       T       .       PASS    AA=C;DP=121     GT:GQ:DP        0|0:89:28       0|1:100:29      0|0:100:62
+8      26447064        rs17055424      A       G       .       PASS    AA=A;DP=123     GT:GQ:DP        0|0:89:28       0|1:100:29      0|0:100:65
+11     89895810        .       A       G       .       PASS    AA=A;DP=123     GT:GQ:DP        0|0:89:28       0|1:100:29      0|0:100:66
+13     83617286        .       C       T       .       PASS    AA=c;DP=130     GT:GQ:DP        0|0:89:28       0|1:100:29      0|0:100:72
+6      85578695        rs11964457      A       G       .       PASS    AA=A;DP=128     GT:GQ:DP        0|0:89:28       0|1:100:29      0|0:100:72
+7      62106175        rs7787095       G       T       .       PASS    AA=.;DP=131     GT:GQ:DP        0|0:89:28       0|1:100:29      0|0:100:73
+2      142717999       .       G       C       .       PASS    AA=G;DP=135     GT:GQ:DP        0|0:89:28       0|1:100:29      0|0:100:79
+7      21818491        .       C       T       .       PASS    AA=C;DP=141     GT:GQ:DP        0|0:89:28       0|1:100:29      0|0:100:83
+1      157790110       rs2084257       C       A       .       PASS    AA=C;DP=142;HM2;HM3     GT:GQ:DP        0|0:89:28       0|1:100:29      0|0:100:86
+4      186206328       .       A       G       .       PASS    AA=A;DP=132     GT:GQ:DP        0|0:89:28       0|1:100:30      0|0:100:62
+7      10646390        .       A       T       .       PASS    AA=A;DP=130     GT:GQ:DP        0|0:89:28       0|1:100:30      0|0:100:65
+9      78015457        .       A       G       .       PASS    AA=A;DP=134     GT:GQ:DP        0|0:89:28       0|1:100:30      0|0:100:74
+2      170205780       rs59121794      A       G       .       PASS    AA=A;DP=141     GT:GQ:DP        0|0:89:28       0|1:100:30      0|0:100:83
+13     76415269        rs17385359      C       T       .       PASS    AA=C;DP=132     GT:GQ:DP        0|0:89:28       0|1:100:30      0|0:96:33
+9      110083079       rs7871442       C       A       .       PASS    AA=A;DP=160     GT:GQ:DP        0|0:89:28       0|1:100:31      0|0:100:46
+2      43197487        rs13400166      A       G       .       PASS    AA=-;DP=165     GT:GQ:DP        0|0:89:28       0|1:100:31      0|0:100:51
+7      111022210       .       A       C       .       PASS    AA=A;DP=132     GT:GQ:DP        0|0:89:28       0|1:100:31      0|0:100:74
+1      235922620       .       C       T       .       PASS    AA=C;DP=154     GT:GQ:DP        0|0:89:28       0|1:100:31      0|0:100:95
+18     35217885        .       A       G       .       PASS    AA=A;DP=113     GT:GQ:DP        0|0:89:28       0|1:100:32      0|0:100:43
+3      27079550        rs1522145       A       G       .       PASS    AA=A;DP=145     GT:GQ:DP        0|0:89:28       0|1:100:32      0|0:100:43
+19     37300392        .       T       C       .       PASS    AA=T;DP=119     GT:GQ:DP        0|0:89:28       0|1:100:32      0|0:100:61
+1      94936976        rs4847344       G       T       .       PASS    AA=G;DP=124     GT:GQ:DP        0|0:89:28       0|1:100:33      0|0:100:63
+8      127735434       rs16901623      G       T       .       PASS    AA=G;DP=140     GT:GQ:DP        0|0:89:28       0|1:100:33      0|0:100:80
+7      16743069        rs12531480      T       C       .       PASS    AA=T;DP=126     GT:GQ:DP        0|0:89:28       0|1:100:34      0|0:100:63
+7      103970145       rs1477110       C       G       .       PASS    AA=C;DP=151     GT:GQ:DP        0|0:89:28       0|1:100:35      0|0:100:90
+8      25724445        rs10283057      T       G       .       PASS    AA=T;DP=158     GT:GQ:DP        0|0:89:28       0|1:100:37      0|0:100:54
+3      37506369        rs1549599       C       T       .       PASS    AA=c;DP=119     GT:GQ:DP        0|0:89:29       0|1:100:13      0|0:100:80
+15     57319691        .       C       T       .       PASS    AA=c;DP=100     GT:GQ:DP        0|0:89:29       0|1:100:15      0|0:100:53
+20     22932077        rs2424497       C       T       .       PASS    AA=T;DP=119     GT:GQ:DP        0|0:89:29       0|1:100:17      0|0:100:73
+9      106624263       .       G       A       .       PASS    AA=G;DP=138     GT:GQ:DP        0|0:89:29       0|1:100:17      0|0:100:93
+6      51565852        .       G       A       .       PASS    AA=G;DP=140     GT:GQ:DP        0|0:89:29       0|1:100:18      0|0:100:40
+5      121491183       rs17148865      C       T       .       PASS    AA=C;DP=105     GT:GQ:DP        0|0:89:29       0|1:100:18      0|0:100:60
+14     102767386       rs1475285       A       G       .       PASS    AA=G;DP=124     GT:GQ:DP        0|0:89:29       0|1:100:18      0|0:100:76
+5      102404218       .       C       T       .       PASS    AA=T;DP=126     GT:GQ:DP        0|0:89:29       0|1:100:18      0|0:100:78
+12     50875897        rs17704963      A       G       .       PASS    AA=A;DP=129     GT:GQ:DP        0|0:89:29       0|1:100:18      0|0:100:85
+8      67049951        .       A       G       .       PASS    AA=A;DP=134     GT:GQ:DP        0|0:89:29       0|1:100:18      0|0:100:89
+11     35298391        .       G       T       .       PASS    AA=G;DP=105     GT:GQ:DP        0|0:89:29       0|1:100:19      0|0:100:60
+5      123740235       rs17151706      T       C       .       PASS    AA=T;DP=114     GT:GQ:DP        0|0:89:29       0|1:100:19      0|0:100:67
+13     21488032        rs3129618       A       G       .       PASS    AA=A;DP=116     GT:GQ:DP        0|0:89:29       0|1:100:20      0|0:100:55
+15     22675920        .       G       A       .       PASS    AA=.;DP=103     GT:GQ:DP        0|0:89:29       0|1:100:20      0|0:100:55
+2      51947543        rs1369668       A       G       .       PASS    AA=A;DP=102     GT:GQ:DP        0|0:89:29       0|1:100:20      0|0:72:24
+12     64716287        .       C       G       .       PASS    AA=C;DP=133     GT:GQ:DP        0|0:89:29       0|1:100:21      0|0:100:44
+10     133365433       .       G       C       .       PASS    AA=G;DP=125     GT:GQ:DP        0|0:89:29       0|1:100:21      0|0:100:75
+1      172300407       rs12096013      G       A       .       PASS    AA=G;DP=128;HM2;HM3     GT:GQ:DP        0|0:89:29       0|1:100:21      0|0:100:79
+3      98685420        rs3762667       C       T       .       PASS    AA=C;DP=125     GT:GQ:DP        0|0:89:29       0|1:100:22      0|0:100:34
+10     135199322       rs41299430      C       T       .       PASS    AA=C;DP=149     GT:GQ:DP        0|0:89:29       0|1:100:22      0|0:100:47
+2      67657784        .       T       C       .       PASS    AA=T;DP=140     GT:GQ:DP        0|0:89:29       0|1:100:22      0|0:100:48
+3      63471161        rs6769716       C       T       .       PASS    AA=T;DP=121     GT:GQ:DP        0|0:89:29       0|1:100:22      0|0:100:73
+2      439050  rs10184571      G       C       .       PASS    AA=G;DP=130     GT:GQ:DP        0|0:89:29       0|1:100:22      0|0:100:79
+4      182484935       rs11936228      G       A       .       PASS    AA=G;DP=169     GT:GQ:DP        0|0:89:29       0|1:100:22      0|0:100:85
+11     128763133       .       T       C       .       PASS    AA=T;DP=118     GT:GQ:DP        0|0:89:29       0|1:100:23      0|0:100:67
+17     29001475        .       C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        0|0:89:29       0|1:100:24      0|0:100:60
+15     77045926        .       C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        0|0:89:29       0|1:100:24      0|0:100:61
+3      185297545       rs56199808      A       G       .       PASS    AA=A;DP=120     GT:GQ:DP        0|0:89:29       0|1:100:24      0|0:100:69
+16     21514691        .       A       G       .       PASS    AA=a;DP=129     GT:GQ:DP        0|0:89:29       0|1:100:24      0|0:100:79
+12     100519673       .       G       A       .       PASS    AA=A;DP=99      GT:GQ:DP        0|0:89:29       0|1:100:25      0|0:100:47
+9      10270923        rs60677326      A       C       .       PASS    AA=C;DP=114     GT:GQ:DP        0|0:89:29       0|1:100:25      0|0:100:61
+1      208524061       .       G       A       .       PASS    AA=G;DP=130     GT:GQ:DP        0|0:89:29       0|1:100:25      0|0:100:74
+1      71698581        .       C       G       .       PASS    AA=G;DP=130     GT:GQ:DP        0|0:89:29       0|1:100:25      0|0:100:77
+20     8883206 rs4077182       C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        0|0:89:29       0|1:100:26      0|0:100:66
+5      5214796 .       T       C       .       PASS    AA=T;DP=141     GT:GQ:DP        0|0:89:29       0|1:100:26      0|0:100:88
+2      183493843       rs4427983       G       A       .       PASS    AA=G;DP=113     GT:GQ:DP        0|0:89:29       0|1:100:28      0|0:100:53
+9      13638463        rs10810001      T       C       .       PASS    AA=t;DP=118     GT:GQ:DP        0|0:89:29       0|1:100:28      0|0:100:63
+22     42658606        rs12484700      A       G       .       PASS    AA=A;DP=126     GT:GQ:DP        0|0:89:29       0|1:100:29      0|0:100:72
+15     34442020        .       G       A       .       PASS    AA=A;DP=156     GT:GQ:DP        0|0:89:29       0|1:100:32      0|0:100:51
+8      128522110       .       G       A       .       PASS    AA=A;DP=147     GT:GQ:DP        0|0:89:29       0|1:100:32      0|0:100:83
+18     48676877        rs1943110       T       C       .       PASS    AA=T;DP=129     GT:GQ:DP        0|0:89:29       0|1:100:34      0|0:100:65
+2      77327050        rs6710391       C       A       .       PASS    AA=C;DP=130     GT:GQ:DP        0|0:89:29       0|1:100:36      0|0:100:63
+21     30874220        .       A       T       .       PASS    AA=A;DP=143     GT:GQ:DP        0|0:89:29       0|1:100:39      0|0:100:76
+2      31347489        rs7606498       G       T       .       PASS    AA=G;DP=105     GT:GQ:DP        0|0:89:29       1|0:100:12      0|1:100:63
+4      17244985        rs3846357       A       T       .       PASS    AA=A;DP=107     GT:GQ:DP        0|0:89:29       1|0:100:12      0|1:100:66
+13     104658333       rs16966112      T       C       .       PASS    AA=T;DP=95      GT:GQ:DP        0|0:89:29       1|0:100:13      0|1:100:53
+4      121190741       .       G       A       .       PASS    AA=G;DP=104     GT:GQ:DP        0|0:89:29       1|0:100:13      0|1:100:65
+19     13727866        rs417186        T       G       .       PASS    AA=T;DP=100     GT:GQ:DP        0|0:89:29       1|0:100:14      0|1:100:57
+16     80445478        rs34028338      G       C       .       PASS    AA=G;DP=105     GT:GQ:DP        0|0:89:29       1|0:100:14      0|1:100:62
+12     71650396        .       T       C       .       PASS    AA=T;DP=111     GT:GQ:DP        0|0:89:29       1|0:100:15      0|1:100:67
+12     27488396        rs1256969       T       C       .       PASS    AA=T;DP=126     GT:GQ:DP        0|0:89:29       1|0:100:16      0|1:100:40
+5      35161686        .       G       C       .       PASS    AA=G;DP=131     GT:GQ:DP        0|0:89:29       1|0:100:16      0|1:100:45
+5      108976542       rs57730672      T       A       .       PASS    AA=T;DP=115     GT:GQ:DP        0|0:89:29       1|0:100:17      0|1:100:70
+2      228036819       .       C       T       .       PASS    AA=C;DP=119     GT:GQ:DP        0|0:89:29       1|0:100:17      0|1:100:74
+1      48711801        .       A       G       .       PASS    AA=A;DP=112     GT:GQ:DP        0|0:89:29       1|0:100:18      0|1:100:62
+3      84522183        .       T       A       .       PASS    AA=T;DP=119     GT:GQ:DP        0|0:89:29       1|0:100:19      0|1:100:29
+18     48765322        .       A       C       .       PASS    AA=A;DP=89      GT:GQ:DP        0|0:89:29       1|0:100:19      0|1:100:30
+13     63949475        .       A       G       .       PASS    AA=A;DP=91      GT:GQ:DP        0|0:89:29       1|0:100:19      0|1:100:44
+2      173580744       rs57172007      G       T       .       PASS    AA=G;DP=123     GT:GQ:DP        0|0:89:29       1|0:100:19      0|1:100:77
+8      100068932       .       A       C       .       PASS    AA=A;DP=95      GT:GQ:DP        0|0:89:29       1|0:100:20      0|1:100:44
+8      6627937 rs1974949       A       G       .       PASS    AA=A;DP=99      GT:GQ:DP        0|0:89:29       1|0:100:20      0|1:100:50
+9      5545023 rs7871338       A       C       .       PASS    AA=C;DP=102     GT:GQ:DP        0|0:89:29       1|0:100:20      0|1:100:53
+10     93619890        rs11186716      G       A       .       PASS    AA=G;DP=101     GT:GQ:DP        0|0:89:29       1|0:100:20      0|1:100:54
+14     100716720       rs61000869      G       A       .       PASS    AA=G;DP=143     GT:GQ:DP        0|0:89:29       1|0:100:20      0|1:100:55
+3      100827840       rs58833452      T       C       .       PASS    AA=T;DP=103     GT:GQ:DP        0|0:89:29       1|0:100:20      0|1:100:55
+10     53838719        rs7080407       C       T       .       PASS    AA=T;DP=114     GT:GQ:DP        0|0:89:29       1|0:100:20      0|1:100:67
+1      192854082       rs6658007       C       A       .       PASS    AA=C;DP=97      GT:GQ:DP        0|0:89:29       1|0:100:21      0|1:100:38
+3      5498687 rs7651986       G       A       .       PASS    AA=G;DP=107     GT:GQ:DP        0|0:89:29       1|0:100:21      0|1:100:56
+2      136313693       rs4988287       T       A       .       PASS    AA=t;DP=116     GT:GQ:DP        0|0:89:29       1|0:100:21      0|1:100:65
+6      22415704        rs2655426       T       G       .       PASS    AA=G;DP=116     GT:GQ:DP        0|0:89:29       1|0:100:21      0|1:100:68
+15     24121954        .       C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        0|0:89:29       1|0:100:21      0|1:100:70
+9      118299362       .       C       T       .       PASS    AA=C;DP=136     GT:GQ:DP        0|0:89:29       1|0:100:21      0|1:100:87
+8      1127024 .       G       A       .       PASS    AA=G;DP=139     GT:GQ:DP        0|0:89:29       1|0:100:21      0|1:100:91
+7      104217800       rs2470967       T       C       .       PASS    AA=T;DP=129     GT:GQ:DP        0|0:89:29       1|0:100:22      0|1:100:37
+15     59908962        .       A       C       .       PASS    AA=A;DP=141     GT:GQ:DP        0|0:89:29       1|0:100:22      0|1:100:46
+8      39820596        .       A       G       .       PASS    AA=A;DP=119     GT:GQ:DP        0|0:89:29       1|0:100:22      0|1:100:53
+18     30592271        rs8092016       A       T       .       PASS    AA=A;DP=108     GT:GQ:DP        0|0:89:29       1|0:100:22      0|1:100:55
+8      88894501        .       A       G       .       PASS    AA=A;DP=109     GT:GQ:DP        0|0:89:29       1|0:100:22      0|1:100:58
+15     38880888        rs28727420      C       T       .       PASS    AA=T;DP=119     GT:GQ:DP        0|0:89:29       1|0:100:22      0|1:100:66
+12     78181136        .       C       T       .       PASS    AA=C;DP=125     GT:GQ:DP        0|0:89:29       1|0:100:22      0|1:100:74
+3      107235926       rs60256747      G       A       .       PASS    AA=G;DP=125     GT:GQ:DP        0|0:89:29       1|0:100:22      0|1:100:75
+11     35457168        rs4456236       A       C       .       PASS    AA=A;DP=124     GT:GQ:DP        0|0:89:29       1|0:100:22      0|1:100:77
+14     61130659        rs17098919      C       T       .       PASS    AA=C;DP=134     GT:GQ:DP        0|0:89:29       1|0:100:22      0|1:100:84
+11     103696072       rs12416991      A       C       .       PASS    AA=A;DP=137     GT:GQ:DP        0|0:89:29       1|0:100:22      0|1:100:86
+12     90878433        rs4076705       T       C       .       PASS    AA=T;DP=138     GT:GQ:DP        0|0:89:29       1|0:100:22      0|1:100:87
+20     57523985        .       C       A       .       PASS    AA=C;DP=140     GT:GQ:DP        0|0:89:29       1|0:100:22      0|1:100:87
+2      121349459       rs57335270      G       A       .       PASS    AA=G;DP=143     GT:GQ:DP        0|0:89:29       1|0:100:22      0|1:100:92
+3      149419055       .       T       C       .       PASS    AA=t;DP=109     GT:GQ:DP        0|0:89:29       1|0:100:23      0|1:100:56
+7      153836035       rs28394294      T       G       .       PASS    AA=a;DP=110     GT:GQ:DP        0|0:89:29       1|0:100:23      0|1:100:59
+2      219896147       rs6728319       A       C       .       PASS    AA=C;DP=118     GT:GQ:DP        0|0:89:29       1|0:100:23      0|1:100:64
+4      111963144       .       T       C       .       PASS    AA=T;DP=124     GT:GQ:DP        0|0:89:29       1|0:100:23      0|1:100:68
+8      17576524        rs2269695       A       G       .       PASS    AA=G;DP=128     GT:GQ:DP        0|0:89:29       1|0:100:23      0|1:100:78
+10     129681408       rs57022864      G       T       .       PASS    AA=G;DP=130     GT:GQ:DP        0|0:89:29       1|0:100:24      0|1:100:34
+8      132167978       .       C       T       .       PASS    AA=C;DP=104     GT:GQ:DP        0|0:89:29       1|0:100:24      0|1:100:51
+15     38059324        .       C       T       .       PASS    AA=C;DP=113     GT:GQ:DP        0|0:89:29       1|0:100:24      0|1:100:64
+5      31620192        .       A       G       .       PASS    AA=A;DP=119     GT:GQ:DP        0|0:89:29       1|0:100:24      0|1:100:66
+15     51796290        .       C       T       .       PASS    AA=C;DP=125     GT:GQ:DP        0|0:89:29       1|0:100:24      0|1:100:72
+10     134188898       .       C       A       .       PASS    AA=C;DP=131     GT:GQ:DP        0|0:89:29       1|0:100:24      0|1:100:78
+14     74719156        .       C       T       .       PASS    AA=C;DP=133     GT:GQ:DP        0|0:89:29       1|0:100:24      0|1:100:81
+12     13023183        rs58560360      G       C       .       PASS    AA=G;DP=141     GT:GQ:DP        0|0:89:29       1|0:100:24      0|1:100:87
+12     96285390        .       C       T       .       PASS    AA=T;DP=97      GT:GQ:DP        0|0:89:29       1|0:100:25      0|1:100:35
+11     31403216        rs1376361       G       C       .       PASS    AA=G;DP=108     GT:GQ:DP        0|0:89:29       1|0:100:25      0|1:100:53
+4      136906002       rs6832126       A       C       .       PASS    AA=A;DP=107     GT:GQ:DP        0|0:89:29       1|0:100:25      0|1:100:53
+5      16556116        rs334466        T       C       .       PASS    AA=T;DP=114     GT:GQ:DP        0|0:89:29       1|0:100:25      0|1:100:59
+16     61188669        rs35941152      G       A       .       PASS    AA=g;DP=114     GT:GQ:DP        0|0:89:29       1|0:100:25      0|1:100:61
+11     126573193       .       C       G       .       PASS    AA=C;DP=118     GT:GQ:DP        0|0:89:29       1|0:100:25      0|1:100:63
+1      226955161       rs59351262      C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        0|0:89:29       1|0:100:25      0|1:100:64
+8      15508269        rs1429082       G       T       .       PASS    AA=G;DP=118     GT:GQ:DP        0|0:89:29       1|0:100:25      0|1:100:66
+18     75399713        rs9947851       G       A       .       PASS    AA=G;DP=123     GT:GQ:DP        0|0:89:29       1|0:100:25      0|1:100:68
+11     4518680 rs61885376      C       G       .       PASS    AA=G;DP=124     GT:GQ:DP        0|0:89:29       1|0:100:25      0|1:100:71
+4      158113598       rs58299872      A       T       .       PASS    AA=a;DP=125     GT:GQ:DP        0|0:89:29       1|0:100:25      0|1:100:71
+9      27123324        rs12343345      A       G       .       PASS    AA=A;DP=136     GT:GQ:DP        0|0:89:29       1|0:100:25      0|1:100:79
+4      7330597 rs6831668       C       T       .       PASS    AA=C;DP=143     GT:GQ:DP        0|0:89:29       1|0:100:25      0|1:100:92
+3      81468064        rs6796098       A       G       .       PASS    AA=A;DP=103     GT:GQ:DP        0|0:89:29       1|0:100:26      0|1:100:50
+4      160799699       rs13135870      C       G       .       PASS    AA=C;DP=113     GT:GQ:DP        0|0:89:29       1|0:100:26      0|1:100:58
+14     32580572        .       T       C       .       PASS    AA=T;DP=114     GT:GQ:DP        0|0:89:29       1|0:100:26      0|1:100:59
+3      193685880       rs58776428      A       G       .       PASS    AA=A;DP=116     GT:GQ:DP        0|0:89:29       1|0:100:27      0|1:100:32
+8      31100239        .       G       A       .       PASS    AA=A;DP=137     GT:GQ:DP        0|0:89:29       1|0:100:27      0|1:100:38
+8      58965346        rs4515538       T       C       .       PASS    AA=t;DP=112     GT:GQ:DP        0|0:89:29       1|0:100:27      0|1:100:56
+13     94143040        .       T       C       .       PASS    AA=T;DP=129     GT:GQ:DP        0|0:89:29       1|0:100:27      0|1:100:74
+5      87126961        .       C       T       .       PASS    AA=C;DP=135     GT:GQ:DP        0|0:89:29       1|0:100:27      0|1:100:80
+2      134186770       rs6430445       C       A       .       PASS    AA=C;DP=140     GT:GQ:DP        0|0:89:29       1|0:100:27      0|1:100:86
+22     38229891        rs742143        G       A       .       PASS    AA=G;DP=154     GT:GQ:DP        0|0:89:29       1|0:100:27      0|1:100:96
+13     100690246       rs2390576       G       A       .       PASS    AA=A;DP=103     GT:GQ:DP        0|0:89:29       1|0:100:28      0|1:100:47
+2      206896187       .       G       A       .       PASS    AA=G;DP=120     GT:GQ:DP        0|0:89:29       1|0:100:28      0|1:100:51
+2      143119473       .       T       A       .       PASS    AA=T;DP=128     GT:GQ:DP        0|0:89:29       1|0:100:28      0|1:100:67
+8      23777365        .       C       T       .       PASS    AA=C;DP=126     GT:GQ:DP        0|0:89:29       1|0:100:28      0|1:100:68
+11     122183988       rs35343548      A       G       .       PASS    AA=A;DP=139     GT:GQ:DP        0|0:89:29       1|0:100:28      0|1:100:83
+20     10124182        .       G       A       .       PASS    AA=G;DP=136     GT:GQ:DP        0|0:89:29       1|0:100:29      0|1:100:33
+11     120869213       rs593769        A       G       .       PASS    AA=A;DP=140     GT:GQ:DP        0|0:89:29       1|0:100:29      0|1:100:38
+18     36031324        .       C       T       .       PASS    AA=C;DP=118     GT:GQ:DP        0|0:89:29       1|0:100:29      0|1:100:60
+1      76390418        rs2706183       G       A       .       PASS    AA=G;DP=119;HM2;HM3     GT:GQ:DP        0|0:89:29       1|0:100:29      0|1:100:61
+1      247146199       .       G       C       .       PASS    AA=G;DP=122     GT:GQ:DP        0|0:89:29       1|0:100:29      0|1:100:62
+3      30119553        .       G       A       .       PASS    AA=A;DP=125     GT:GQ:DP        0|0:89:29       1|0:100:29      0|1:100:65
+6      101577854       .       T       A       .       PASS    AA=T;DP=132     GT:GQ:DP        0|0:89:29       1|0:100:29      0|1:100:73
+6      168654416       rs9456150       T       C       .       PASS    AA=T;DP=129     GT:GQ:DP        0|0:89:29       1|0:100:29      0|1:100:73
+12     22145007        rs2418042       T       C       .       PASS    AA=T;DP=130     GT:GQ:DP        0|0:89:29       1|0:100:29      0|1:100:74
+11     80898710        rs17142449      A       G       .       PASS    AA=A;DP=124     GT:GQ:DP        0|0:89:29       1|0:100:30      0|1:100:67
+10     130972871       .       A       C       .       PASS    AA=A;DP=133     GT:GQ:DP        0|0:89:29       1|0:100:30      0|1:100:70
+1      154552137       rs10908501      G       T       .       PASS    AA=G;DP=131;HM2 GT:GQ:DP        0|0:89:29       1|0:100:30      0|1:100:72
+8      53091756        rs61159260      A       G       .       PASS    AA=A;DP=133     GT:GQ:DP        0|0:89:29       1|0:100:30      0|1:100:73
+12     9764956 rs2058560       C       T       .       PASS    AA=c;DP=125     GT:GQ:DP        0|0:89:29       1|0:100:31      0|1:100:65
+11     91941534        rs607236        G       C       .       PASS    AA=C;DP=135     GT:GQ:DP        0|0:89:29       1|0:100:31      0|1:100:78
+18     58028819        .       T       C       .       PASS    AA=T;DP=106     GT:GQ:DP        0|0:89:29       1|0:100:32      0|1:100:45
+1      5281272 rs9439566       T       C       .       PASS    AA=T;DP=165     GT:GQ:DP        0|0:89:29       1|0:100:32      0|1:100:56
+5      115980173       rs680878        G       A       .       PASS    AA=G;DP=122     GT:GQ:DP        0|0:89:29       1|0:100:32      0|1:100:60
+5      124380704       rs12652362      A       G       .       PASS    AA=A;DP=132     GT:GQ:DP        0|0:89:29       1|0:100:32      0|1:100:71
+16     53895439        .       A       G       .       PASS    AA=A;DP=135     GT:GQ:DP        0|0:89:29       1|0:100:32      0|1:100:72
+3      109391858       .       C       T       .       PASS    AA=C;DP=130     GT:GQ:DP        0|0:89:29       1|0:100:32      0|1:100:72
+13     27350230        rs9581922       G       C       .       PASS    AA=g;DP=130     GT:GQ:DP        0|0:89:29       1|0:100:32      0|1:100:74
+3      115115433       rs2712339       C       T       .       PASS    AA=T;DP=142     GT:GQ:DP        0|0:89:29       1|0:100:32      0|1:100:77
+9      77277207        rs59409378      A       G       .       PASS    AA=A;DP=140     GT:GQ:DP        0|0:89:29       1|0:100:33      0|1:100:78
+5      78393808        rs16876472      T       G       .       PASS    AA=T;DP=157     GT:GQ:DP        0|0:89:29       1|0:100:33      0|1:100:83
+2      3967588 rs4261733       T       C       .       PASS    AA=T;DP=125     GT:GQ:DP        0|0:89:29       1|0:100:34      0|1:100:62
+20     12905452        rs6109640       G       A       .       PASS    AA=G;DP=145     GT:GQ:DP        0|0:89:29       1|0:100:34      0|1:100:77
+7      67728281        rs4717464       C       T       .       PASS    AA=C;DP=140     GT:GQ:DP        0|0:89:29       1|0:100:34      0|1:100:77
+6      132948548       .       G       A       .       PASS    AA=G;DP=155     GT:GQ:DP        0|0:89:29       1|0:100:38      0|1:100:82
+6      33826053        rs10947435      G       A       .       PASS    AA=G;DP=150     GT:GQ:DP        0|0:89:29       1|0:20:21       0|1:100:54
+17     49116973        .       G       A       .       PASS    AA=G;DP=80      GT:GQ:DP        0|0:89:29       1|0:28:10       0|1:100:42
+21     34157216        .       G       A       .       PASS    AA=A;DP=126     GT:GQ:DP        0|0:89:29       1|0:34:22       0|1:100:71
+21     42124524        .       C       G       .       PASS    AA=c;DP=101     GT:GQ:DP        0|0:89:29       1|0:36:11       0|1:100:61
+5      41693888        rs1423242       A       G       .       PASS    AA=G;DP=89      GT:GQ:DP        0|0:89:29       1|0:37:14       0|1:100:38
+19     53738858        rs2544808       C       T       .       PASS    AA=c;DP=130     GT:GQ:DP        0|0:89:29       1|0:40:12       0|1:100:88
+4      117150054       .       A       G       .       PASS    AA=A;DP=101     GT:GQ:DP        0|0:89:29       1|0:44:23       0|1:100:49
+16     1306284 rs57032216      A       G       .       PASS    AA=A;DP=125     GT:GQ:DP        0|0:89:29       1|0:46:19       0|1:100:77
+9      92530457        rs1148843       G       A       .       PASS    AA=-;DP=96      GT:GQ:DP        0|0:89:29       1|0:48:13       0|1:100:39
+1      4658299 rs11800746      G       A       .       PASS    AA=G;DP=145;HM2;HM3     GT:GQ:DP        0|0:89:29       1|0:49:21       0|1:100:47
+5      157180365       .       T       A       .       PASS    AA=t;DP=105     GT:GQ:DP        0|0:89:29       1|0:50:19       0|1:100:56
+X      579425  rs5946606       C       T       .       PASS    AA=c;DP=83      GT:GQ:DP        0|0:89:29       1|0:54:9        0|1:100:39
+19     53795331        rs378333        C       T       .       PASS    AA=c;DP=122     GT:GQ:DP        0|0:89:29       1|0:65:15       0|1:100:78
+1      2751755 .       A       T       .       PASS    AA=A;DP=104     GT:GQ:DP        0|0:89:29       1|0:75:13       0|1:100:61
+1      224739910       .       C       T       .       PASS    AA=C;DP=103     GT:GQ:DP        0|0:89:29       1|0:75:24       0|1:100:51
+17     45568310        .       C       T       .       PASS    AA=C;DP=84      GT:GQ:DP        0|0:89:29       1|0:76:12       0|1:100:32
+13     112922928       .       A       C       .       PASS    AA=a;DP=116     GT:GQ:DP        0|0:89:29       1|0:76:23       0|1:100:64
+3      163000535       rs4856655       C       A       .       PASS    AA=C;DP=102     GT:GQ:DP        0|0:89:29       1|0:78:21       0|1:100:53
+6      19714081        .       C       T       .       PASS    AA=C;DP=119     GT:GQ:DP        0|0:89:29       1|0:84:19       0|1:100:73
+3      132452895       .       G       A       .       PASS    AA=G;DP=90      GT:GQ:DP        0|0:89:29       1|0:89:17       0|1:100:45
+6      5996116 rs4959367       G       A       .       PASS    AA=G;DP=122     GT:GQ:DP        0|0:89:29       1|0:89:26       0|1:100:68
+17     77249955        rs11546630      G       A       .       PASS    AA=g;DP=123     GT:GQ:DP        0|0:89:29       1|0:90:15       0|1:100:79
+6      100421748       rs2397660       A       G       .       PASS    AA=A;DP=133     GT:GQ:DP        0|0:89:29       1|0:90:16       0|1:100:43
+10     91362279        rs1536313       G       A       .       PASS    AA=G;DP=104     GT:GQ:DP        0|0:89:29       1|0:91:21       0|1:100:56
+14     83266466        .       C       G       .       PASS    AA=C;DP=110     GT:GQ:DP        0|0:89:29       1|0:92:15       0|1:100:59
+7      93341327        .       G       T       .       PASS    AA=T;DP=106     GT:GQ:DP        0|0:89:29       1|0:92:18       0|1:100:53
+7      141436653       .       T       G       .       PASS    AA=T;DP=115     GT:GQ:DP        0|0:89:29       1|0:92:18       0|1:100:57
+11     120157336       rs59456852      C       T       .       PASS    AA=c;DP=90      GT:GQ:DP        0|0:89:29       1|0:93:15       0|1:100:35
+3      123090903       rs9822997       A       G       .       PASS    AA=A;DP=111     GT:GQ:DP        0|0:89:29       1|0:93:15       0|1:100:70
+14     45551310        .       G       A       .       PASS    AA=g;DP=109     GT:GQ:DP        0|0:89:29       1|0:93:16       0|1:100:63
+1      242206101       rs960091        T       C       .       PASS    AA=T;DP=90;HM2;HM3      GT:GQ:DP        0|0:89:29       1|0:94:16       0|1:100:44
+10     108875174       rs860288        C       A       .       PASS    AA=C;DP=123     GT:GQ:DP        0|0:89:29       1|0:95:25       0|1:100:72
+8      13959769        rs2410150       A       G       .       PASS    AA=G;DP=122     GT:GQ:DP        0|0:89:29       1|0:97:19       0|1:100:75
+3      82523526        rs9847116       C       T       .       PASS    AA=C;DP=96      GT:GQ:DP        0|0:89:29       1|0:98:12       0|1:100:55
+9      85066690        rs12336597      T       C       .       PASS    AA=T;DP=137     GT:GQ:DP        0|0:89:29       1|0:98:19       0|1:100:88
+2      52783348        rs6545299       G       A       .       PASS    AA=G;DP=113     GT:GQ:DP        0|0:89:29       1|0:99:21       0|1:100:66
+4      28622726        .       T       C       .       PASS    AA=T;DP=138     GT:GQ:DP        0|0:89:29       1|0:99:25       0|1:100:82
+9      17353218        rs6475145       A       C       .       PASS    AA=A;DP=120     GT:GQ:DP        0|0:89:29       1|0:99:32       0|1:100:49
+11     19662169        rs11025215      T       G       .       PASS    AA=T;DP=119     GT:GQ:DP        0|0:89:30       0|1:100:16      0|0:100:69
+2      119289998       rs1866408       C       T       .       PASS    AA=C;DP=122     GT:GQ:DP        0|0:89:30       0|1:100:18      0|0:100:74
+7      100963618       rs6972296       C       T       .       PASS    AA=T;DP=134     GT:GQ:DP        0|0:89:30       0|1:100:18      0|0:100:85
+5      89973186        .       A       G       .       PASS    AA=G;DP=110     GT:GQ:DP        0|0:89:30       0|1:100:20      0|0:100:56
+1      160694567       rs59394709      G       A       .       PASS    AA=g;DP=85      GT:GQ:DP        0|0:89:30       0|1:100:20      0|0:78:26
+18     57514311        .       G       T       .       PASS    AA=G;DP=117     GT:GQ:DP        0|0:89:30       0|1:100:23      0|0:100:64
+8      72264303        rs16937494      G       A       .       PASS    AA=G;DP=140     GT:GQ:DP        0|0:89:30       0|1:100:23      0|0:100:88
+1      54100946        rs6681067       G       A       .       PASS    AA=G;DP=123     GT:GQ:DP        0|0:89:30       0|1:100:25      0|0:100:66
+11     69004681        .       C       T       .       PASS    AA=C;DP=125     GT:GQ:DP        0|0:89:30       0|1:100:25      0|0:100:70
+13     43765294        rs9525935       A       G       .       PASS    AA=A;DP=122     GT:GQ:DP        0|0:89:30       0|1:100:25      0|0:100:70
+17     37528688        .       A       G       .       PASS    AA=A;DP=151     GT:GQ:DP        0|0:89:30       0|1:100:26      0|0:100:97
+2      69255821        rs7595055       G       C       .       PASS    AA=G;DP=137     GT:GQ:DP        0|0:89:30       0|1:100:27      0|0:100:81
+3      139143542       rs6439770       C       G       .       PASS    AA=g;DP=124     GT:GQ:DP        0|0:89:30       0|1:100:29      0|0:100:66
+20     18149837        rs979242        T       C       .       PASS    AA=t;DP=113     GT:GQ:DP        0|0:89:30       0|1:100:31      0|0:100:55
+4      163464239       rs7683631       T       C       .       PASS    AA=.;DP=155     GT:GQ:DP        0|0:89:30       0|1:100:32      0|0:100:95
+11     65560326        rs7931167       A       G       .       PASS    AA=G;DP=125     GT:GQ:DP        0|0:89:30       1|0:100:15      0|1:100:82
+9      21644725        .       C       A       .       PASS    AA=c;DP=91      GT:GQ:DP        0|0:89:30       1|0:100:16      0|1:100:49
+2      6229340 .       G       T       .       PASS    AA=G;DP=122     GT:GQ:DP        0|0:89:30       1|0:100:16      0|1:100:75
+7      15187509        .       A       G       .       PASS    AA=A;DP=100     GT:GQ:DP        0|0:89:30       1|0:100:17      0|1:100:55
+4      127371859       rs60255216      A       G       .       PASS    AA=a;DP=98      GT:GQ:DP        0|0:89:30       1|0:100:18      0|1:100:50
+14     86875476        rs1367357       G       C       .       PASS    AA=G;DP=98      GT:GQ:DP        0|0:89:30       1|0:100:18      0|1:100:51
+1      50922251        rs41478350      T       C       .       PASS    AA=T;DP=119;HM3 GT:GQ:DP        0|0:89:30       1|0:100:18      0|1:100:70
+22     36619330        rs5995514       G       T       .       PASS    AA=G;DP=120     GT:GQ:DP        0|0:89:30       1|0:100:18      0|1:100:73
+8      126770992       rs13269575      A       G       .       PASS    AA=A;DP=132     GT:GQ:DP        0|0:89:30       1|0:100:18      0|1:100:86
+7      114508464       .       G       A       .       PASS    AA=G;DP=95      GT:GQ:DP        0|0:89:30       1|0:100:19      0|1:100:47
+20     24125786        rs1496400       C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        0|0:89:30       1|0:100:19      0|1:100:63
+20     49950663        .       C       G       .       PASS    AA=C;DP=126     GT:GQ:DP        0|0:89:30       1|0:100:19      0|1:100:78
+11     131256395       rs10894471      C       A       .       PASS    AA=A;DP=131     GT:GQ:DP        0|0:89:30       1|0:100:19      0|1:100:83
+16     78554393        rs11150234      G       A       .       PASS    AA=G;DP=103     GT:GQ:DP        0|0:89:30       1|0:100:20      0|1:100:53
+8      43574625        rs57285299      C       G       .       PASS    AA=N;DP=106     GT:GQ:DP        0|0:89:30       1|0:100:20      0|1:100:56
+6      113652291       .       C       T       .       PASS    AA=T;DP=97      GT:GQ:DP        0|0:89:30       1|0:100:21      0|1:100:34
+13     93954975        rs9556381       G       A       .       PASS    AA=G;DP=106     GT:GQ:DP        0|0:89:30       1|0:100:21      0|1:100:55
+6      124961623       .       A       G       .       PASS    AA=A;DP=112     GT:GQ:DP        0|0:89:30       1|0:100:21      0|1:100:60
+21     39783580        .       C       T       .       PASS    AA=C;DP=112     GT:GQ:DP        0|0:89:30       1|0:100:21      0|1:100:63
+11     15752362        rs16932003      G       C       .       PASS    AA=G;DP=132     GT:GQ:DP        0|0:89:30       1|0:100:21      0|1:100:79
+10     3373158 rs10795029      A       G       .       PASS    AA=A;DP=117     GT:GQ:DP        0|0:89:30       1|0:100:22      0|1:100:61
+16     73452205        .       T       A       .       PASS    AA=T;DP=117     GT:GQ:DP        0|0:89:30       1|0:100:22      0|1:100:66
+4      145337230       rs7695923       C       T       .       PASS    AA=C;DP=123     GT:GQ:DP        0|0:89:30       1|0:100:22      0|1:100:71
+3      102283723       rs55756100      C       T       .       PASS    AA=c;DP=123     GT:GQ:DP        0|0:89:30       1|0:100:23      0|1:100:30
+16     79372878        .       C       G       .       PASS    AA=C;DP=136     GT:GQ:DP        0|0:89:30       1|0:100:23      0|1:100:39
+7      56679814        rs1849663       C       T       .       PASS    AA=c;DP=107     GT:GQ:DP        0|0:89:30       1|0:100:23      0|1:100:46
+14     95458237        .       C       A       .       PASS    AA=C;DP=170     GT:GQ:DP        0|0:89:30       1|0:100:23      0|1:100:56
+2      163930443       rs1221528       G       A       .       PASS    AA=G;DP=111     GT:GQ:DP        0|0:89:30       1|0:100:23      0|1:100:58
+8      35386134        rs13282746      T       C       .       PASS    AA=T;DP=113     GT:GQ:DP        0|0:89:30       1|0:100:24      0|1:100:56
+1      213112488       rs1779670       C       G       .       PASS    AA=C;DP=116     GT:GQ:DP        0|0:89:30       1|0:100:24      0|1:100:61
+9      7897459 rs10815712      C       T       .       PASS    AA=C;DP=128     GT:GQ:DP        0|0:89:30       1|0:100:24      0|1:100:69
+3      29597408        .       T       G       .       PASS    AA=T;DP=126     GT:GQ:DP        0|0:89:30       1|0:100:24      0|1:100:77
+7      111347283       rs1014799       C       T       .       PASS    AA=T;DP=138     GT:GQ:DP        0|0:89:30       1|0:100:25      0|1:100:36
+18     70063899        rs12969457      A       T       .       PASS    AA=A;DP=151     GT:GQ:DP        0|0:89:30       1|0:100:25      0|1:100:47
+4      98125701        rs34004192      G       C       .       PASS    AA=G;DP=125     GT:GQ:DP        0|0:89:30       1|0:100:25      0|1:100:72
+15     88752520        rs10520688      T       C       .       PASS    AA=T;DP=125     GT:GQ:DP        0|0:89:30       1|0:100:26      0|1:100:69
+8      29700984        .       T       A       .       PASS    AA=T;DP=126     GT:GQ:DP        0|0:89:30       1|0:100:26      0|1:100:71
+14     20659170        .       T       A       .       PASS    AA=T;DP=115     GT:GQ:DP        0|0:89:30       1|0:100:27      0|1:100:59
+20     6564193 .       C       T       .       PASS    AA=C;DP=114     GT:GQ:DP        0|0:89:30       1|0:100:27      0|1:100:59
+3      177154302       rs12631924      G       A       .       PASS    AA=G;DP=122     GT:GQ:DP        0|0:89:30       1|0:100:27      0|1:100:65
+11     34593309        rs12270873      C       T       .       PASS    AA=T;DP=127     GT:GQ:DP        0|0:89:30       1|0:100:27      0|1:100:73
+12     2741539 rs7301770       G       A       .       PASS    AA=g;DP=136     GT:GQ:DP        0|0:89:30       1|0:100:27      0|1:100:79
+14     58719490        .       T       G       .       PASS    AA=T;DP=137     GT:GQ:DP        0|0:89:30       1|0:100:27      0|1:100:79
+14     23970151        rs61021873      T       C       .       PASS    AA=T;DP=184     GT:GQ:DP        0|0:89:30       1|0:100:31      0|1:100:58
+14     42544156        rs1584547       G       A       .       PASS    AA=A;DP=127     GT:GQ:DP        0|0:89:30       1|0:100:32      0|1:100:64
+17     70198165        .       C       T       .       PASS    AA=C;DP=148     GT:GQ:DP        0|0:89:30       1|0:100:33      0|1:100:45
+7      33096347        .       C       T       .       PASS    AA=C;DP=149     GT:GQ:DP        0|0:89:30       1|0:100:33      0|1:100:47
+14     97015464        rs58983996      A       C       .       PASS    AA=A;DP=125     GT:GQ:DP        0|0:89:30       1|0:100:34      0|1:100:62
+7      36152896        rs11772400      G       C       .       PASS    AA=G;DP=149     GT:GQ:DP        0|0:89:30       1|0:100:34      0|1:100:84
+7      2928819 rs3735131       C       G       .       PASS    AA=C;DP=124     GT:GQ:DP        0|0:89:30       1|0:12:15       0|1:100:79
+7      56096516        .       G       A       .       PASS    AA=G;DP=117     GT:GQ:DP        0|0:89:30       1|0:16:16       0|1:100:72
+18     72515625        rs2102417       C       G       .       PASS    AA=c;DP=118     GT:GQ:DP        0|0:89:30       1|0:46:14       0|1:100:73
+14     84803077        rs17120944      C       T       .       PASS    AA=C;DP=102     GT:GQ:DP        0|0:89:30       1|0:48:16       0|1:100:56
+17     29791492        rs4795921       A       G       .       PASS    AA=G;DP=101     GT:GQ:DP        0|0:89:30       1|0:54:16       0|1:100:54
+6      144608132       rs12529594      C       T       .       PASS    AA=C;DP=132     GT:GQ:DP        0|0:89:30       1|0:55:22       0|1:100:82
+5      64937847        rs154940        C       T       .       PASS    AA=C;DP=95      GT:GQ:DP        0|0:89:30       1|0:59:19       0|1:100:35
+9      72834636        rs11142672      A       G       .       PASS    AA=a;DP=95      GT:GQ:DP        0|0:89:30       1|0:65:16       0|1:100:47
+4      167972227       rs6834977       T       C       .       PASS    AA=T;DP=112     GT:GQ:DP        0|0:89:30       1|0:68:18       0|1:100:64
+11     100916329       rs7112388       T       C       .       PASS    AA=T;DP=117     GT:GQ:DP        0|0:89:30       1|0:68:20       0|1:100:66
+9      136849113       rs4372081       A       G       .       PASS    AA=A;DP=108     GT:GQ:DP        0|0:89:30       1|0:70:12       0|1:100:66
+17     61482887        rs11871584      C       T       .       PASS    AA=C;DP=129     GT:GQ:DP        0|0:89:30       1|0:73:18       0|1:100:39
+10     45227142        rs56071381      G       T       .       PASS    AA=T;DP=130     GT:GQ:DP        0|0:89:30       1|0:76:12       0|1:100:80
+12     25143555        rs7960428       G       A       .       PASS    AA=G;DP=132     GT:GQ:DP        0|0:89:30       1|0:76:24       0|1:100:73
+6      151979346       .       C       T       .       PASS    AA=c;DP=124     GT:GQ:DP        0|0:89:30       1|0:77:22       0|1:100:74
+2      20627490        rs62124185      G       A       .       PASS    AA=G;DP=97      GT:GQ:DP        0|0:89:30       1|0:80:14       0|1:100:44
+3      193250047       .       C       T       .       PASS    AA=C;DP=129     GT:GQ:DP        0|0:89:30       1|0:85:15       0|1:100:37
+13     45065440        rs3014936       T       G       .       PASS    AA=G;DP=114     GT:GQ:DP        0|0:89:30       1|0:88:17       0|1:100:69
+19     15888609        .       A       G       .       PASS    AA=a;DP=119     GT:GQ:DP        0|0:89:30       1|0:93:26       0|1:100:49
+5      29583571        rs329883        G       A       .       PASS    AA=A;DP=123     GT:GQ:DP        0|0:89:30       1|0:94:16       0|1:100:78
+2      199870972       rs7605111       C       T       .       PASS    AA=T;DP=95      GT:GQ:DP        0|0:89:30       1|0:98:15       0|1:100:51
+6      97492814        rs60086952      G       A       .       PASS    AA=G;DP=134     GT:GQ:DP        0|0:89:30       1|0:99:25       0|1:100:39
+6      148513132       rs57666620      T       G       .       PASS    AA=T;DP=117     GT:GQ:DP        0|0:89:31       0|1:100:23      0|0:100:64
+4      21830023        rs4235294       G       A       .       PASS    AA=G;DP=139     GT:GQ:DP        0|0:89:31       0|1:100:25      0|0:99:37
+6      113875150       rs6903628       G       A       .       PASS    AA=A;DP=149     GT:GQ:DP        0|0:89:31       0|1:100:33      0|0:100:91
+3      149797712       .       T       C       .       PASS    AA=T;DP=146     GT:GQ:DP        0|0:89:31       0|1:100:36      0|0:100:77
+4      24547452        .       T       C       .       PASS    AA=T;DP=99      GT:GQ:DP        0|0:89:31       1|0:100:10      0|1:100:58
+17     69630457        .       G       A       .       PASS    AA=G;DP=108     GT:GQ:DP        0|0:89:31       1|0:100:15      0|1:100:62
+2      45108696        .       A       G       .       PASS    AA=G;DP=108     GT:GQ:DP        0|0:89:31       1|0:100:16      0|1:100:59
+6      136704117       rs3757159       C       T       .       PASS    AA=C;DP=99      GT:GQ:DP        0|0:89:31       1|0:100:20      0|1:100:48
+16     64866377        rs57153059      A       T       .       PASS    AA=A;DP=122     GT:GQ:DP        0|0:89:31       1|0:100:20      0|1:100:71
+6      42662933        .       G       C       .       PASS    AA=C;DP=108     GT:GQ:DP        0|0:89:31       1|0:100:21      0|1:100:56
+22     23578855        rs139677        C       T       .       PASS    AA=C;DP=117     GT:GQ:DP        0|0:89:31       1|0:100:22      0|1:100:64
+3      176553507       .       A       G       .       PASS    AA=A;DP=125     GT:GQ:DP        0|0:89:31       1|0:100:22      0|1:100:73
+5      105700193       rs60066554      A       G       .       PASS    AA=A;DP=129     GT:GQ:DP        0|0:89:31       1|0:100:22      0|1:100:79
+15     37110749        .       A       G       .       PASS    AA=A;DP=108     GT:GQ:DP        0|0:89:31       1|0:100:24      0|1:100:56
+13     20939246        rs4769166       A       G       .       PASS    AA=G;DP=125     GT:GQ:DP        0|0:89:31       1|0:100:24      0|1:100:67
+3      144692980       rs60849188      G       A       .       PASS    AA=G;DP=117     GT:GQ:DP        0|0:89:31       1|0:100:25      0|1:100:64
+2      226483379       rs13001533      C       T       .       PASS    AA=C;DP=140     GT:GQ:DP        0|0:89:31       1|0:100:25      0|1:100:83
+12     53195691        rs1627341       G       A       .       PASS    AA=G;DP=136     GT:GQ:DP        0|0:89:31       1|0:100:26      0|1:100:83
+1      181372546       rs4652780       G       C       .       PASS    AA=G;DP=133;HM2 GT:GQ:DP        0|0:89:31       1|0:100:31      0|1:100:74
+1      104768465       rs1448395       T       C       .       PASS    AA=t;DP=104;HM2;HM3     GT:GQ:DP        0|0:89:31       1|0:46:19       0|1:100:53
+1      235096405       .       G       A       .       PASS    AA=G;DP=112     GT:GQ:DP        0|0:89:31       1|0:55:27       0|1:100:53
+6      10804888        rs7769462       G       A       .       PASS    AA=G;DP=98      GT:GQ:DP        0|0:89:31       1|0:64:13       0|1:100:53
+8      70916427        rs7012009       A       G       .       PASS    AA=A;DP=123     GT:GQ:DP        0|0:89:31       1|0:68:21       0|1:100:72
+9      131161765       rs28361592      A       G       .       PASS    AA=A;DP=133     GT:GQ:DP        0|0:89:31       1|0:71:17       0|1:100:38
+1      179059835       .       A       G       .       PASS    AA=A;DP=111     GT:GQ:DP        0|0:89:31       1|0:73:20       0|1:100:60
+14     23516476        rs2759420       T       G       .       PASS    AA=T;DP=96      GT:GQ:DP        0|0:89:31       1|0:91:14       0|1:100:49
+21     24306020        .       C       G       .       PASS    AA=G;DP=124     GT:GQ:DP        0|0:89:32       1|0:100:19      0|1:100:76
+18     55940027        .       A       G       .       PASS    AA=A;DP=112     GT:GQ:DP        0|0:89:32       1|0:100:23      0|1:100:57
+18     1284416 rs9959459       T       C       .       PASS    AA=T;DP=120     GT:GQ:DP        0|0:89:32       1|0:100:27      0|1:100:61
+22     48972006        rs7292398       T       C       .       PASS    AA=t;DP=118     GT:GQ:DP        0|0:89:32       1|0:90:11       0|1:100:74
+4      149937722       rs35790025      G       A       .       PASS    AA=G;DP=143     GT:GQ:DP        0|0:89:33       0|1:100:23      0|0:100:86
+16     84950365        rs1623214       T       C       .       PASS    AA=T;DP=98      GT:GQ:DP        0|0:89:35       1|0:4:15        0|1:100:49
+10     35077579        .       T       A       .       PASS    AA=T;DP=119     GT:GQ:DP        0|0:89:35       1|0:50:15       0|1:100:69
+4      75026543        rs352015        T       A       .       PASS    AA=T;DP=154     GT:GQ:DP        0|0:89:36       1|0:100:24      0|1:100:54
+6      107022384       rs9372128       C       T       .       PASS    AA=C;DP=109     GT:GQ:DP        0|0:89:36       1|1:40:15       0|1:100:56
+5      14742707        rs152788        G       A       .       PASS    AA=G;DP=146     GT:GQ:DP        0|0:89:37       1|1:58:23       0|1:100:83
+11     78457068        .       C       G       .       PASS    AA=C;DP=138     GT:GQ:DP        0|0:89:38       1|0:100:25      0|1:100:77
+2      241943427       .       G       T       .       PASS    AA=G;DP=154     GT:GQ:DP        0|0:89:40       0|1:100:16      0|0:100:56
+13     20401739        rs2314724       T       C       .       PASS    AA=T;DP=130     GT:GQ:DP        0|0:89:40       0|1:100:25      0|0:100:63
+3      39935140        rs6785143       C       A       .       PASS    AA=C;DP=146     GT:GQ:DP        0|0:89:40       0|1:100:27      0|0:100:81
+5      116096825       rs2909817       T       C       .       PASS    AA=C;DP=101     GT:GQ:DP        0|0:89:41       1|0:100:19      0|1:100:28
+9      72057399        rs1180086       C       T       .       PASS    AA=C;DP=137     GT:GQ:DP        0|0:89:41       1|0:100:23      0|1:100:75
+8      135495974       .       G       T       .       PASS    AA=G;DP=123     GT:GQ:DP        0|0:89:41       1|0:100:32      0|1:100:52
+X      106984024       .       T       G       .       PASS    AA=T;DP=104     GT:GQ:DP        0|0:8:10        0|1:100:27      0|0:35:23
+X      146210996       rs16994084      G       T       .       PASS    AA=T;DP=101     GT:GQ:DP        0|0:8:14        1|0:80:22       0|1:100:24
+X      18106522        .       T       C       .       PASS    AA=T;DP=94      GT:GQ:DP        0|0:8:2 1|0:53:23       0|1:100:32
+17     4974263 .       G       A       .       PASS    AA=g;DP=154     GT:GQ:DP        0|0:8:33        1|0:76:30       0|1:94:93
+X      87411427        .       T       G       .       PASS    AA=.;DP=69      GT:GQ:DP        0|0:8:7 1|1:40:15       0|1:100:23
+8      1140605 rs17062789      G       A       .       PASS    AA=g;DP=103     GT:GQ:DP        0|0:90:30       1|1:13:8        0|1:100:67
+19     13568893        rs12610203      T       C       .       PASS    AA=-;DP=95      GT:GQ:DP        0|0:90:30       1|1:22:13       0|1:100:51
+1      244439231       rs5024440       G       C       .       PASS    AA=G;DP=94      GT:GQ:DP        0|0:90:30       1|1:25:10       0|1:100:51
+X      154862060       rs6642391       T       C       .       PASS    AA=T;DP=87      GT:GQ:DP        0|0:90:30       1|1:25:18       0|1:100:29
+8      741859  rs4735933       G       A       .       PASS    AA=G;DP=108     GT:GQ:DP        0|0:90:30       1|1:28:12       0|1:100:67
+5      152695628       rs2964820       G       C       .       PASS    AA=G;DP=118     GT:GQ:DP        0|0:90:30       1|1:30:27       0|1:100:60
+6      105585620       rs2057391       C       A       .       PASS    AA=A;DP=101     GT:GQ:DP        0|0:90:30       1|1:32:18       0|1:100:54
+6      47621163        rs7767939       A       C       .       PASS    AA=T;DP=117     GT:GQ:DP        0|0:90:30       1|1:34:13       0|1:100:74
+8      80449463        rs58724827      T       G       .       PASS    AA=T;DP=134     GT:GQ:DP        0|0:90:30       1|1:38:24       0|1:100:80
+9      129378098       rs4269634       A       G       .       PASS    AA=A;DP=147     GT:GQ:DP        0|0:90:30       1|1:40:15       0|1:100:50
+14     93485790        rs7141151       G       A       .       PASS    AA=G;DP=118     GT:GQ:DP        0|0:90:30       1|1:40:15       0|1:100:75
+13     107936148       .       G       A       .       PASS    AA=G;DP=113     GT:GQ:DP        0|0:90:30       1|1:40:16       0|1:100:66
+8      117224170       rs4573309       G       A       .       PASS    AA=A;DP=102     GT:GQ:DP        0|0:90:30       1|1:43:17       0|1:100:57
+6      165166061       rs6905712       T       A       .       PASS    AA=A;DP=112     GT:GQ:DP        0|0:90:30       1|1:45:20       0|1:100:63
+4      119427750       rs7664110       C       T       .       PASS    AA=T;DP=96      GT:GQ:DP        0|0:90:30       1|1:45:23       0|1:100:41
+14     49088491        rs4900927       G       T       .       PASS    AA=T;DP=122     GT:GQ:DP        0|0:90:30       1|1:46:17       0|1:100:34
+7      115980467       rs1022436       C       G       .       PASS    AA=C;DP=93      GT:GQ:DP        0|0:90:30       1|1:46:17       0|1:100:43
+13     30568331        rs4941749       T       G       .       PASS    AA=G;DP=105     GT:GQ:DP        0|0:90:30       1|1:47:24       0|1:100:51
+22     20822604        rs5757030       G       A       .       PASS    AA=g;DP=108     GT:GQ:DP        0|0:90:30       1|1:49:18       0|1:100:61
+10     58449291        rs2393171       T       C       .       PASS    AA=C;DP=111     GT:GQ:DP        0|0:90:30       1|1:49:19       0|1:100:63
+20     48514690        rs1967439       C       T       .       PASS    AA=C;DP=112     GT:GQ:DP        0|0:90:30       1|1:49:20       0|1:100:66
+8      65709723        .       A       G       .       PASS    AA=A;DP=112     GT:GQ:DP        0|0:90:30       1|1:51:24       0|1:100:58
+12     85132852        rs839104        T       G       .       PASS    AA=T;DP=110     GT:GQ:DP        0|0:90:30       1|1:52:19       0|1:100:59
+18     440277  rs9675606       C       T       .       PASS    AA=C;DP=116     GT:GQ:DP        0|0:90:30       1|1:52:19       0|1:100:68
+14     22045316        rs3751470       A       G       .       PASS    AA=A;DP=127     GT:GQ:DP        0|0:90:30       1|1:52:20       0|1:100:77
+22     21342709        rs4481090       G       A       .       PASS    AA=.;DP=112     GT:GQ:DP        0|0:90:30       1|1:52:25       0|1:100:58
+2      221362542       rs13415636      C       T       .       PASS    AA=C;DP=121     GT:GQ:DP        0|0:90:30       1|1:53:31       0|1:100:60
+2      224266851       rs1898608       A       C       .       PASS    AA=C;DP=112     GT:GQ:DP        0|0:90:30       1|1:55:20       0|1:100:61
+4      137289836       rs1451110       C       T       .       PASS    AA=C;DP=126     GT:GQ:DP        0|0:90:30       1|1:55:20       0|1:100:76
+5      142848605       rs6880439       C       T       .       PASS    AA=C;DP=119     GT:GQ:DP        0|0:90:30       1|1:55:21       0|1:100:66
+12     85181495        rs2465147       T       C       .       PASS    AA=T;DP=121     GT:GQ:DP        0|0:90:30       1|1:55:23       0|1:100:67
+12     44020977        rs10785572      C       A       .       PASS    AA=C;DP=112     GT:GQ:DP        0|0:90:30       1|1:58:21       0|1:100:63
+9      28704565        .       G       T       .       PASS    AA=G;DP=132     GT:GQ:DP        0|0:90:30       1|1:58:21       0|1:100:83
+2      206441728       rs16837745      C       T       .       PASS    AA=T;DP=122     GT:GQ:DP        0|0:90:30       1|1:61:22       0|1:100:71
+5      151654303       rs6579927       C       T       .       PASS    AA=T;DP=106     GT:GQ:DP        0|0:90:30       1|1:61:23       0|1:100:54
+8      140468458       rs6984506       A       G       .       PASS    AA=A;DP=129     GT:GQ:DP        0|0:90:30       1|1:61:24       0|1:100:75
+2      167377496       .       T       A       .       PASS    AA=T;DP=133     GT:GQ:DP        0|0:90:30       1|1:64:23       0|1:100:64
+20     49631445        rs55883350      C       T       .       PASS    AA=C;DP=135     GT:GQ:DP        0|0:90:30       1|1:64:23       0|1:100:82
+5      2265631 .       G       A       .       PASS    AA=G;DP=128     GT:GQ:DP        0|0:90:30       1|1:64:24       0|1:100:74
+2      129800907       rs6734916       C       T       .       PASS    AA=T;DP=121     GT:GQ:DP        0|0:90:30       1|1:64:26       0|1:100:64
+18     55356101        rs4940469       T       C       .       PASS    AA=t;DP=131     GT:GQ:DP        0|0:90:30       1|1:76:27       0|1:100:34
+20     43805236        rs460326        G       A       .       PASS    AA=G;DP=138     GT:GQ:DP        0|0:90:30       1|1:76:27       0|1:100:84
+4      137858045       rs28833489      T       G       .       PASS    AA=G;DP=124     GT:GQ:DP        0|0:90:30       1|1:76:28       0|1:100:68
+16     54220383        rs11076109      T       C       .       PASS    AA=T;DP=152     GT:GQ:DP        0|0:90:30       1|1:76:28       0|1:100:88
+16     69313157        rs11075781      C       T       .       PASS    AA=T;DP=116     GT:GQ:DP        0|0:90:30       1|1:8:13        0|1:100:57
+16     7867982 .       G       T       .       PASS    AA=G;DP=129     GT:GQ:DP        0|0:90:31       0|1:100:32      0|0:100:68
+2      28986103        rs6739354       A       G       .       PASS    AA=G;DP=111     GT:GQ:DP        0|0:90:31       1|1:13:18       0|1:100:50
+10     80809468        rs941873        G       A       .       PASS    AA=G;DP=92      GT:GQ:DP        0|0:90:31       1|1:22:9        0|1:100:39
+4      28714734        rs28630732      G       C       .       PASS    AA=C;DP=125     GT:GQ:DP        0|0:90:31       1|1:27:17       0|1:100:33
+22     43454535        rs9626515       C       T       .       PASS    AA=C;DP=124     GT:GQ:DP        0|0:90:31       1|1:28:12       0|1:100:81
+15     68365979        rs9744310       A       C       .       PASS    AA=a;DP=128     GT:GQ:DP        0|0:90:31       1|1:34:23       0|1:100:73
+5      19599998        rs901472        C       G       .       PASS    AA=C;DP=135     GT:GQ:DP        0|0:90:31       1|1:37:14       0|1:100:88
+6      125673612       .       A       T       .       PASS    AA=A;DP=120     GT:GQ:DP        0|0:90:31       1|1:39:24       0|1:100:66
+19     34553874        rs6509390       A       T       .       PASS    AA=T;DP=87      GT:GQ:DP        0|0:90:31       1|1:40:15       0|1:100:33
+22     23941223        rs4820623       T       C       .       PASS    AA=C;DP=96      GT:GQ:DP        0|0:90:31       1|1:40:15       0|1:100:38
+16     70004357        rs16972292      T       G       .       PASS    AA=T;DP=173     GT:GQ:DP        0|0:90:31       1|1:44:30       0|1:100:42
+5      9613249 rs150631        C       T       .       PASS    AA=c;DP=123     GT:GQ:DP        0|0:90:31       1|1:49:19       0|1:100:72
+15     78288818        .       A       G       .       PASS    AA=A;DP=161     GT:GQ:DP        0|0:90:31       1|1:52:20       0|1:100:109
+8      5600034 rs1877492       T       C       .       PASS    AA=T;DP=105     GT:GQ:DP        0|0:90:31       1|1:55:20       0|1:100:55
+18     26343390        rs2120084       C       T       .       PASS    AA=T;DP=109     GT:GQ:DP        0|0:90:31       1|1:55:20       0|1:100:57
+6      103770456       rs509432        T       A       .       PASS    AA=C;DP=117     GT:GQ:DP        0|0:90:31       1|1:55:20       0|1:100:64
+11     49923724        rs1608632       C       T       .       PASS    AA=-;DP=115     GT:GQ:DP        0|0:90:31       1|1:55:21       0|1:100:63
+11     8553130 rs11041993      T       C       .       PASS    AA=T;DP=97      GT:GQ:DP        0|0:90:31       1|1:61:22       0|1:100:37
+10     72764203        rs12252139      G       A       .       PASS    AA=G;DP=147     GT:GQ:DP        0|0:90:31       1|1:61:24       0|1:100:93
+11     18353569        rs12274166      C       G       .       PASS    AA=C;DP=129     GT:GQ:DP        0|0:90:31       1|1:63:28       0|1:100:69
+3      12695967        rs9874557       A       G       .       PASS    AA=.;DP=146     GT:GQ:DP        0|0:90:31       1|1:64:24       0|1:100:77
+3      129290525       rs9812487       G       C       .       PASS    AA=C;DP=138     GT:GQ:DP        0|0:90:31       1|1:67:25       0|1:100:80
+2      45424854        rs6717619       T       C       .       PASS    AA=C;DP=139     GT:GQ:DP        0|0:90:31       1|1:67:25       0|1:100:84
+1      29956120        rs894218        C       A       .       PASS    AA=C;DP=96      GT:GQ:DP        0|0:90:31       1|1:70:25       0|1:100:42
+10     31513849        rs2995656       A       G       .       PASS    AA=A;DP=126     GT:GQ:DP        0|0:90:31       1|1:73:26       0|1:100:72
+7      76936247        rs2107912       G       A       .       PASS    AA=G;DP=134     GT:GQ:DP        0|0:90:31       1|1:88:31       0|1:100:70
+12     4798537 rs56021447      G       A       .       PASS    AA=N;DP=130     GT:GQ:DP        0|0:90:31       1|1:91:32       0|1:100:66
+2      240857803       .       C       T       .       PASS    AA=C;DP=138     GT:GQ:DP        0|0:90:32       1|1:12:17       0|1:100:90
+6      40303910        rs10456103      G       A       .       PASS    AA=g;DP=111     GT:GQ:DP        0|0:90:32       1|1:22:9        0|1:100:71
+2      45911605        rs6721727       C       T       .       PASS    AA=C;DP=134     GT:GQ:DP        0|0:90:32       1|1:70:26       0|1:100:68
+10     18383325        rs4748438       G       A       .       PASS    AA=G;DP=132     GT:GQ:DP        0|0:90:32       1|1:85:31       0|1:100:67
+6      30524810        rs4959050       C       T       .       PASS    AA=T;DP=135     GT:GQ:DP        0|0:90:32       1|1:85:31       0|1:100:73
+7      130029851       rs2872137       T       C       .       PASS    AA=C;DP=133     GT:GQ:DP        0|0:90:33       1|0:100:25      0|1:100:66
+1      68184568        .       C       A       .       PASS    AA=C;DP=110     GT:GQ:DP        0|0:90:34       1|0:100:17      0|1:100:57
+7      52054704        rs2244741       C       T       .       PASS    AA=T;DP=116     GT:GQ:DP        0|0:90:34       1|1:34:14       0|1:100:70
+2      44768213        .       A       G       .       PASS    AA=A;DP=153     GT:GQ:DP        0|0:90:35       0|1:100:26      0|0:100:54
+16     7748324 rs17144800      G       A       .       PASS    AA=G;DP=132     GT:GQ:DP        0|0:90:36       1|0:100:21      0|1:100:74
+11     122121269       rs1894081       T       C       .       PASS    AA=T;DP=141     GT:GQ:DP        0|0:90:36       1|0:100:26      0|1:100:80
+8      41324152        rs12549180      A       G       .       PASS    AA=A;DP=119     GT:GQ:DP        0|0:90:36       1|1:67:25       0|1:100:59
+12     91965549        rs11106827      C       T       .       PASS    AA=C;DP=139     GT:GQ:DP        0|0:90:36       1|1:79:29       0|1:100:77
+9      97985919        rs11794015      T       G       .       PASS    AA=T;DP=172     GT:GQ:DP        0|0:90:39       0|1:100:29      0|0:100:60
+1      212156483       rs6681892       T       G       .       PASS    AA=G;DP=124;HM2;HM3     GT:GQ:DP        0|0:90:42       1|1:43:16       0|1:100:65
+6      167186435       rs6921573       T       C       .       PASS    AA=T;DP=153     GT:GQ:DP        0|0:91:30       0|1:100:22      0|0:100:45
+6      31178295        rs7756290       A       T       .       PASS    AA=A;DP=112     GT:GQ:DP        0|0:91:30       1|0:96:24       0|1:100:60
+19     22815587        rs11671459      G       A       .       PASS    AA=G;DP=117     GT:GQ:DP        0|0:91:31       1|0:100:17      0|1:100:68
+5      123907720       rs35202761      A       G       .       PASS    AA=A;DP=126     GT:GQ:DP        0|0:91:31       1|0:100:18      0|1:100:77
+14     98535475        rs59703117      G       A       .       PASS    AA=G;DP=125     GT:GQ:DP        0|0:91:34       0|1:100:20      0|0:100:72
+2      240696055       rs6727006       C       T       .       PASS    AA=C;DP=176     GT:GQ:DP        0|0:91:34       0|1:100:24      0|0:100:63
+10     42419180        .       G       C       .       PASS    AA=g;DP=132     GT:GQ:DP        0|0:91:34       0|1:100:25      0|0:100:73
+20     42765996        rs2209525       G       A       .       PASS    AA=G;DP=172     GT:GQ:DP        0|0:91:34       1|0:91:28       0|1:100:56
+3      29234611        .       G       T       .       PASS    AA=G;DP=135     GT:GQ:DP        0|0:91:35       0|1:100:20      0|0:100:42
+15     92278210        .       T       G       .       PASS    AA=G;DP=137     GT:GQ:DP        0|0:91:35       0|1:100:28      0|0:100:74
+20     10414340        rs638441        G       A       .       PASS    AA=A;DP=151     GT:GQ:DP        0|0:91:35       0|1:100:28      0|0:100:93
+1      163286625       rs1419074       C       T       .       PASS    AA=T;DP=121;HM2;HM3     GT:GQ:DP        0|0:91:35       0|1:100:35      0|0:100:52
+16     78439123        rs59832278      A       C       .       PASS    AA=A;DP=155     GT:GQ:DP        0|0:91:36       1|0:100:22      0|1:100:52
+4      13077461        rs61121978      T       C       .       PASS    AA=T;DP=130     GT:GQ:DP        0|0:91:36       1|0:100:35      0|1:100:61
+8      143699612       .       C       A       .       PASS    AA=N;DP=163     GT:GQ:DP        0|0:91:37       1|0:69:21       0|1:100:64
+14     96981947        rs234442        A       T       .       PASS    AA=A;DP=136     GT:GQ:DP        0|0:91:37       1|1:40:23       0|1:100:77
+6      1841441 rs1998519       A       C       .       PASS    AA=A;DP=115     GT:GQ:DP        0|0:91:37       1|1:55:20       0|1:100:59
+6      157007854       rs1246176       C       T       .       PASS    AA=c;DP=153     GT:GQ:DP        0|0:91:38       1|1:61:22       0|1:100:51
+5      98309487        rs56331947      C       G       .       PASS    AA=C;DP=133     GT:GQ:DP        0|0:91:39       0|1:100:24      0|0:100:70
+11     211825  rs56011058      C       G       .       PASS    AA=C;DP=146     GT:GQ:DP        0|0:91:47       1|1:67:24       0|1:100:75
+16     59731068        .       C       A       .       PASS    AA=C;DP=88      GT:GQ:DP        0|0:92:29       0|1:100:10      0|0:100:48
+12     119154415       .       C       T       .       PASS    AA=C;DP=96      GT:GQ:DP        0|0:92:29       0|1:100:13      0|0:100:43
+20     5855558 rs12479591      C       T       .       PASS    AA=C;DP=105     GT:GQ:DP        0|0:92:29       0|1:100:13      0|0:100:64
+15     89705857        .       T       C       .       PASS    AA=T;DP=124     GT:GQ:DP        0|0:92:29       0|1:100:14      0|0:100:41
+14     104127005       .       G       A       .       PASS    AA=g;DP=104     GT:GQ:DP        0|0:92:29       0|1:100:14      0|0:100:49
+7      134460402       rs2881868       C       G       .       PASS    AA=g;DP=97      GT:GQ:DP        0|0:92:29       0|1:100:14      0|0:84:28
+22     45151416        .       G       C       .       PASS    AA=G;DP=116     GT:GQ:DP        0|0:92:29       0|1:100:15      0|0:100:75
+2      88698150        rs6731022       G       C       .       PASS    AA=G;DP=113     GT:GQ:DP        0|0:92:29       0|1:100:16      0|0:100:67
+7      97675368        .       C       A       .       PASS    AA=T;DP=97      GT:GQ:DP        0|0:92:29       0|1:100:17      0|0:100:53
+1      117513568       rs6689385       G       A       .       PASS    AA=G;DP=108;HM2 GT:GQ:DP        0|0:92:29       0|1:100:17      0|0:100:65
+6      22064860        rs6909084       C       A       .       PASS    AA=A;DP=111     GT:GQ:DP        0|0:92:29       0|1:100:17      0|0:100:66
+16     64466772        .       A       G       .       PASS    AA=A;DP=114     GT:GQ:DP        0|0:92:29       0|1:100:17      0|0:100:68
+7      86594615        .       A       G       .       PASS    AA=A;DP=117     GT:GQ:DP        0|0:92:29       0|1:100:17      0|0:100:68
+5      155790275       .       C       T       .       PASS    AA=c;DP=121     GT:GQ:DP        0|0:92:29       0|1:100:17      0|0:100:76
+12     51102109        .       G       T       .       PASS    AA=G;DP=134     GT:GQ:DP        0|0:92:29       0|1:100:17      0|0:100:91
+6      154132866       rs1344161       G       C       .       PASS    AA=G;DP=119     GT:GQ:DP        0|0:92:29       0|1:100:17      0|0:93:31
+15     29077666        rs7183478       T       C       .       PASS    AA=T;DP=133     GT:GQ:DP        0|0:92:29       0|1:100:18      0|0:100:48
+19     3775657 rs56752898      G       A       .       PASS    AA=.;DP=96      GT:GQ:DP        0|0:92:29       0|1:100:18      0|0:100:48
+20     5092406 .       T       C       .       PASS    AA=T;DP=97      GT:GQ:DP        0|0:92:29       0|1:100:18      0|0:100:50
+19     61262009        rs379192        G       A       .       PASS    AA=g;DP=142     GT:GQ:DP        0|0:92:29       0|1:100:18      0|0:100:52
+22     46308301        rs6008249       C       T       .       PASS    AA=C;DP=146     GT:GQ:DP        0|0:92:29       0|1:100:18      0|0:100:52
+6      107403534       .       A       G       .       PASS    AA=A;DP=104     GT:GQ:DP        0|0:92:29       0|1:100:18      0|0:100:57
+12     96000868        rs7315318       G       A       .       PASS    AA=G;DP=110     GT:GQ:DP        0|0:92:29       0|1:100:18      0|0:100:65
+7      126198162       rs10258687      A       T       .       PASS    AA=A;DP=117     GT:GQ:DP        0|0:92:29       0|1:100:18      0|0:100:72
+1      87184058        rs1199733       G       C       .       PASS    AA=G;DP=90;HM2  GT:GQ:DP        0|0:92:29       0|1:100:18      0|0:93:32
+5      3398525 .       G       A       .       PASS    AA=G;DP=100     GT:GQ:DP        0|0:92:29       0|1:100:19      0|0:100:39
+8      63417250        rs16928729      A       G       .       PASS    AA=a;DP=92      GT:GQ:DP        0|0:92:29       0|1:100:19      0|0:100:44
+14     73947986        rs10144851      G       A       .       PASS    AA=G;DP=148     GT:GQ:DP        0|0:92:29       0|1:100:19      0|0:100:54
+2      135364083       .       A       C       .       PASS    AA=A;DP=105     GT:GQ:DP        0|0:92:29       0|1:100:19      0|0:100:56
+2      133460942       rs10184845      A       G       .       PASS    AA=A;DP=106     GT:GQ:DP        0|0:92:29       0|1:100:19      0|0:100:57
+8      56757296        .       A       T       .       PASS    AA=A;DP=113     GT:GQ:DP        0|0:92:29       0|1:100:19      0|0:100:66
+9      108326888       rs1602109       C       T       .       PASS    AA=T;DP=116     GT:GQ:DP        0|0:92:29       0|1:100:19      0|0:100:69
+6      5201071 rs9504364       C       T       .       PASS    AA=c;DP=117     GT:GQ:DP        0|0:92:29       0|1:100:19      0|0:100:70
+7      154233554       rs28455101      T       C       .       PASS    AA=T;DP=124     GT:GQ:DP        0|0:92:29       0|1:100:19      0|0:100:70
+13     38986007        rs7981122       G       A       .       PASS    AA=G;DP=126     GT:GQ:DP        0|0:92:29       0|1:100:19      0|0:100:75
+11     27275764        rs11029928      G       A       .       PASS    AA=G;DP=132     GT:GQ:DP        0|0:92:29       0|1:100:19      0|0:100:83
+4      7595779 rs4365723       A       G       .       PASS    AA=N;DP=139     GT:GQ:DP        0|0:92:29       0|1:100:19      0|0:100:92
+2      40070487        .       A       G       .       PASS    AA=A;DP=102     GT:GQ:DP        0|0:92:29       0|1:100:20      0|0:100:53
+13     75765997        .       G       A       .       PASS    AA=G;DP=109     GT:GQ:DP        0|0:92:29       0|1:100:20      0|0:100:63
+8      120630008       .       A       G       .       PASS    AA=A;DP=113     GT:GQ:DP        0|0:92:29       0|1:100:20      0|0:100:64
+10     128140869       .       A       C       .       PASS    AA=A;DP=122     GT:GQ:DP        0|0:92:29       0|1:100:20      0|0:100:74
+10     61840836        rs7100501       A       G       .       PASS    AA=A;DP=123     GT:GQ:DP        0|0:92:29       0|1:100:20      0|0:100:74
+10     70792776        .       A       G       .       PASS    AA=A;DP=127     GT:GQ:DP        0|0:92:29       0|1:100:20      0|0:100:81
+21     33179488        rs2833988       C       T       .       PASS    AA=C;DP=129     GT:GQ:DP        0|0:92:29       0|1:100:20      0|0:100:81
+13     79701579        rs348010        C       T       .       PASS    AA=C;DP=87      GT:GQ:DP        0|0:92:29       0|1:100:21      0|0:100:36
+7      123630472       .       A       G       .       PASS    AA=A;DP=111     GT:GQ:DP        0|0:92:29       0|1:100:21      0|0:100:60
+2      174055657       .       A       T       .       PASS    AA=A;DP=118     GT:GQ:DP        0|0:92:29       0|1:100:21      0|0:100:66
+12     101256095       .       G       A       .       PASS    AA=G;DP=115     GT:GQ:DP        0|0:92:29       0|1:100:21      0|0:100:67
+8      134243562       rs2739112       G       A       .       PASS    AA=G;DP=115     GT:GQ:DP        0|0:92:29       0|1:100:21      0|0:100:69
+7      3989029 rs35968641      G       T       .       PASS    AA=G;DP=121     GT:GQ:DP        0|0:92:29       0|1:100:21      0|0:100:71
+8      139259289       .       C       A       .       PASS    AA=C;DP=126     GT:GQ:DP        0|0:92:29       0|1:100:21      0|0:100:74
+2      241677414       rs1062748       A       G       .       PASS    AA=A;DP=125     GT:GQ:DP        0|0:92:29       0|1:100:21      0|0:100:76
+3      22808485        rs1450304       C       T       .       PASS    AA=T;DP=125     GT:GQ:DP        0|0:92:29       0|1:100:21      0|0:100:76
+11     12430919        .       T       C       .       PASS    AA=T;DP=126     GT:GQ:DP        0|0:92:29       0|1:100:21      0|0:100:78
+2      41409268        rs17027469      A       G       .       PASS    AA=A;DP=133     GT:GQ:DP        0|0:92:29       0|1:100:21      0|0:100:79
+13     44773028        .       A       G       .       PASS    AA=A;DP=134     GT:GQ:DP        0|0:92:29       0|1:100:21      0|0:100:84
+13     41359615        .       C       A       .       PASS    AA=C;DP=140     GT:GQ:DP        0|0:92:29       0|1:100:21      0|0:100:93
+22     24840660        .       G       A       .       PASS    AA=A;DP=118     GT:GQ:DP        0|0:92:29       0|1:100:22      0|0:100:68
+4      105723810       .       C       T       .       PASS    AA=C;DP=106     GT:GQ:DP        0|0:92:29       0|1:100:23      0|0:100:54
+15     37279601        rs16968383      A       G       .       PASS    AA=G;DP=115     GT:GQ:DP        0|0:92:29       0|1:100:23      0|0:100:60
+10     62529698        .       T       C       .       PASS    AA=T;DP=119     GT:GQ:DP        0|0:92:29       0|1:100:23      0|0:100:64
+2      168314613       .       G       A       .       PASS    AA=G;DP=121     GT:GQ:DP        0|0:92:29       0|1:100:23      0|0:100:71
+16     68080782        rs12445536      G       A       .       PASS    AA=A;DP=125     GT:GQ:DP        0|0:92:29       0|1:100:23      0|0:100:72
+6      122347107       rs2679684       G       A       .       PASS    AA=G;DP=124     GT:GQ:DP        0|0:92:29       0|1:100:23      0|0:100:72
+3      172504439       rs16856138      C       T       .       PASS    AA=C;DP=131     GT:GQ:DP        0|0:92:29       0|1:100:23      0|0:100:79
+9      27830794        rs12376406      T       G       .       PASS    AA=T;DP=98      GT:GQ:DP        0|0:92:29       0|1:100:24      0|0:100:45
+14     54477101        .       A       G       .       PASS    AA=G;DP=125     GT:GQ:DP        0|0:92:29       0|1:100:24      0|0:100:59
+16     63506406        .       A       G       .       PASS    AA=G;DP=117     GT:GQ:DP        0|0:92:29       0|1:100:24      0|0:100:64
+14     20019358        .       C       A       .       PASS    AA=C;DP=121     GT:GQ:DP        0|0:92:29       0|1:100:24      0|0:100:69
+3      49614457        .       A       T       .       PASS    AA=A;DP=134     GT:GQ:DP        0|0:92:29       0|1:100:24      0|0:100:72
+7      129612451       rs4731668       T       C       .       PASS    AA=T;DP=138     GT:GQ:DP        0|0:92:29       0|1:100:24      0|0:100:84
+12     47570396        .       T       C       .       PASS    AA=T;DP=143     GT:GQ:DP        0|0:92:29       0|1:100:24      0|0:100:89
+3      172872015       .       T       C       .       PASS    AA=T;DP=117     GT:GQ:DP        0|0:92:29       0|1:100:24      0|0:72:24
+21     32695120        .       G       A       .       PASS    AA=G;DP=158     GT:GQ:DP        0|0:92:29       0|1:100:25      0|0:100:53
+3      110186392       rs2593960       A       T       .       PASS    AA=G;DP=118     GT:GQ:DP        0|0:92:29       0|1:100:25      0|0:100:63
+10     108240584       .       T       G       .       PASS    AA=T;DP=122     GT:GQ:DP        0|0:92:29       0|1:100:25      0|0:100:67
+12     70922268        rs10748192      C       A       .       PASS    AA=A;DP=123     GT:GQ:DP        0|0:92:29       0|1:100:25      0|0:100:72
+16     23008006        rs60796341      G       A       .       PASS    AA=G;DP=132     GT:GQ:DP        0|0:92:29       0|1:100:25      0|0:100:76
+4      11988869        rs10006873      T       C       .       PASS    AA=T;DP=113     GT:GQ:DP        0|0:92:29       0|1:100:26      0|0:100:58
+3      132896773       .       G       A       .       PASS    AA=G;DP=148     GT:GQ:DP        0|0:92:29       0|1:100:26      0|0:100:92
+4      16886911        rs6832045       G       T       .       PASS    AA=T;DP=134     GT:GQ:DP        0|0:92:29       0|1:100:27      0|0:100:39
+13     76042399        .       T       G       .       PASS    AA=T;DP=117     GT:GQ:DP        0|0:92:29       0|1:100:27      0|0:100:59
+17     15970501        .       C       T       .       PASS    AA=c;DP=133     GT:GQ:DP        0|0:92:29       0|1:100:27      0|0:100:77
+6      125438911       rs6569413       C       T       .       PASS    AA=C;DP=131     GT:GQ:DP        0|0:92:29       0|1:100:27      0|0:100:78
+9      70708119        .       T       A       .       PASS    AA=T;DP=176     GT:GQ:DP        0|0:92:29       0|1:100:28      0|0:100:57
+5      32924539        .       T       C       .       PASS    AA=T;DP=121     GT:GQ:DP        0|0:92:29       0|1:100:28      0|0:100:65
+4      86458872        .       G       A       .       PASS    AA=G;DP=123     GT:GQ:DP        0|0:92:29       0|1:100:28      0|0:100:69
+2      174016188       rs930311        C       T       .       PASS    AA=T;DP=137     GT:GQ:DP        0|0:92:29       0|1:100:28      0|0:100:80
+17     6418713 rs36105772      T       C       .       PASS    AA=t;DP=153     GT:GQ:DP        0|0:92:29       0|1:100:29      0|0:100:51
+18     4022671 rs10502316      C       G       .       PASS    AA=C;DP=111     GT:GQ:DP        0|0:92:29       0|1:100:29      0|0:100:53
+8      17548455        rs11996177      T       C       .       PASS    AA=T;DP=127     GT:GQ:DP        0|0:92:29       0|1:100:29      0|0:100:71
+16     24538577        rs17831122      G       A       .       PASS    AA=A;DP=137     GT:GQ:DP        0|0:92:29       0|1:100:29      0|0:100:79
+11     4367578 rs926100        C       A       .       PASS    AA=A;DP=143     GT:GQ:DP        0|0:92:29       0|1:100:29      0|0:100:81
+11     129646091       .       C       A       .       PASS    AA=A;DP=140     GT:GQ:DP        0|0:92:29       0|1:100:29      0|0:100:83
+9      140052272       .       G       A       .       PASS    AA=G;DP=144     GT:GQ:DP        0|0:92:29       0|1:100:29      0|0:100:87
+12     65290280        rs10878465      T       G       .       PASS    AA=T;DP=118     GT:GQ:DP        0|0:92:29       0|1:100:30      0|0:100:48
+5      177928515       rs625820        G       T       .       PASS    AA=G;DP=129     GT:GQ:DP        0|0:92:29       0|1:100:30      0|0:100:72
+7      152653354       .       A       G       .       PASS    AA=A;DP=139     GT:GQ:DP        0|0:92:29       0|1:100:30      0|0:100:81
+20     20002367        rs55883030      G       A       .       PASS    AA=G;DP=153     GT:GQ:DP        0|0:92:29       0|1:100:31      0|0:100:50
+10     62195644        rs12258587      A       G       .       PASS    AA=A;DP=125     GT:GQ:DP        0|0:92:29       0|1:100:31      0|0:100:66
+12     90781264        rs10777342      T       C       .       PASS    AA=T;DP=134     GT:GQ:DP        0|0:92:29       0|1:100:31      0|0:100:74
+6      155760080       .       G       A       .       PASS    AA=G;DP=148     GT:GQ:DP        0|0:92:29       0|1:100:31      0|0:100:87
+3      99993968        .       A       G       .       PASS    AA=A;DP=127     GT:GQ:DP        0|0:92:29       0|1:100:32      0|0:100:65
+13     75893809        rs9318426       A       T       .       PASS    AA=A;DP=136     GT:GQ:DP        0|0:92:29       0|1:100:32      0|0:100:70
+5      128518496       rs10060653      G       A       .       PASS    AA=G;DP=133     GT:GQ:DP        0|0:92:29       0|1:100:32      0|0:100:72
+5      133038550       .       T       G       .       PASS    AA=T;DP=130     GT:GQ:DP        0|0:92:29       0|1:100:32      0|0:100:73
+3      63989944        rs35840 C       A       .       PASS    AA=C;DP=152     GT:GQ:DP        0|0:92:29       0|1:100:32      0|0:100:88
+11     78074182        rs873272        T       C       .       PASS    AA=T;DP=134     GT:GQ:DP        0|0:92:29       0|1:100:34      0|0:100:68
+1      203581865       rs11590464      C       G       .       PASS    AA=C;DP=134;HM2 GT:GQ:DP        0|0:92:29       0|1:100:34      0|0:100:72
+X      93201975        .       T       C       .       PASS    AA=T;DP=152     GT:GQ:DP        0|0:92:29       0|1:100:35      0|0:100:47
+15     52333535        rs56002016      C       T       .       PASS    AA=T;DP=132     GT:GQ:DP        0|0:92:29       0|1:100:36      0|0:100:68
+3      173002487       rs13321742      G       A       .       PASS    AA=G;DP=145     GT:GQ:DP        0|0:92:29       0|1:100:36      0|0:100:82
+1      78903271        .       T       C       .       PASS    AA=T;DP=155     GT:GQ:DP        0|0:92:29       0|1:100:37      0|0:100:85
+8      105907394       rs13282311      G       T       .       PASS    AA=T;DP=106     GT:GQ:DP        0|0:92:29       0|1:100:8       0|0:100:71
+10     50011577        rs34589684      G       A       .       PASS    AA=G;DP=125     GT:GQ:DP        0|0:92:30       0|1:100:14      0|0:100:40
+3      194913851       rs7611489       G       T       .       PASS    AA=G;DP=128     GT:GQ:DP        0|0:92:30       0|1:100:15      0|0:100:83
+5      35775742        .       T       C       .       PASS    AA=T;DP=98      GT:GQ:DP        0|0:92:30       0|1:100:16      0|0:100:52
+19     62244886        .       T       A       .       PASS    AA=T;DP=118     GT:GQ:DP        0|0:92:30       0|1:100:17      0|0:100:71
+7      10447590        rs7797318       A       G       .       PASS    AA=A;DP=117     GT:GQ:DP        0|0:92:30       0|1:100:17      0|0:100:73
+7      98714778        .       C       T       .       PASS    AA=C;DP=114     GT:GQ:DP        0|0:92:30       0|1:100:18      0|0:100:67
+2      130145759       .       G       A       .       PASS    AA=g;DP=129     GT:GQ:DP        0|0:92:30       0|1:100:18      0|0:100:81
+1      188005094       .       G       A       .       PASS    AA=G;DP=104     GT:GQ:DP        0|0:92:30       0|1:100:19      0|0:100:55
+2      173206458       rs17753893      A       G       .       PASS    AA=A;DP=105     GT:GQ:DP        0|0:92:30       0|1:100:19      0|0:100:56
+9      82040954        .       T       C       .       PASS    AA=T;DP=94      GT:GQ:DP        0|0:92:30       0|1:100:20      0|0:100:44
+9      132918611       rs55950144      G       C       .       PASS    AA=G;DP=118     GT:GQ:DP        0|0:92:30       0|1:100:20      0|0:100:68
+12     107547115       rs8179125       C       T       .       PASS    AA=C;DP=123     GT:GQ:DP        0|0:92:30       0|1:100:20      0|0:100:73
+8      93539906        rs7000007       A       C       .       PASS    AA=A;DP=121     GT:GQ:DP        0|0:92:30       0|1:100:20      0|0:100:77
+9      112560936       rs10980556      G       A       .       PASS    AA=T;DP=137     GT:GQ:DP        0|0:92:30       0|1:100:20      0|0:100:87
+3      166721649       .       A       G       .       PASS    AA=A;DP=144     GT:GQ:DP        0|0:92:30       0|1:100:21      0|0:100:40
+6      20514712        .       G       A       .       PASS    AA=G;DP=115     GT:GQ:DP        0|0:92:30       0|1:100:21      0|0:100:67
+1      160078212       rs1006311       T       G       .       PASS    AA=G;DP=121     GT:GQ:DP        0|0:92:30       0|1:100:21      0|0:100:69
+4      60870981        rs35205097      T       A       .       PASS    AA=T;DP=112     GT:GQ:DP        0|0:92:30       0|1:100:22      0|0:100:59
+9      15239631        .       G       A       .       PASS    AA=G;DP=114     GT:GQ:DP        0|0:92:30       0|1:100:22      0|0:100:64
+8      122850140       rs7816930       G       A       .       PASS    AA=G;DP=119     GT:GQ:DP        0|0:92:30       0|1:100:22      0|0:100:66
+7      96804785        .       C       T       .       PASS    AA=C;DP=121     GT:GQ:DP        0|0:92:30       0|1:100:22      0|0:100:70
+6      63644689        .       G       C       .       PASS    AA=G;DP=125     GT:GQ:DP        0|0:92:30       0|1:100:22      0|0:100:72
+6      149694982       .       A       C       .       PASS    AA=A;DP=121     GT:GQ:DP        0|0:92:30       0|1:100:22      0|0:100:73
+11     13269659        .       G       A       .       PASS    AA=G;DP=119     GT:GQ:DP        0|0:92:30       0|1:100:23      0|0:100:61
+5      114365650       rs17137337      G       A       .       PASS    AA=A;DP=120     GT:GQ:DP        0|0:92:30       0|1:100:23      0|0:100:68
+2      145426189       rs786240        G       T       .       PASS    AA=G;DP=128     GT:GQ:DP        0|0:92:30       0|1:100:23      0|0:100:73
+18     69385680        rs17087848      A       G       .       PASS    AA=A;DP=140     GT:GQ:DP        0|0:92:30       0|1:100:24      0|0:100:38
+21     40572260        .       C       T       .       PASS    AA=T;DP=118     GT:GQ:DP        0|0:92:30       0|1:100:24      0|0:100:61
+2      69824153        .       G       A       .       PASS    AA=G;DP=115     GT:GQ:DP        0|0:92:30       0|1:100:24      0|0:100:62
+1      232669341       rs16843252      A       G       .       PASS    AA=G;DP=124     GT:GQ:DP        0|0:92:30       0|1:100:24      0|0:100:68
+4      33525809        .       C       T       .       PASS    AA=c;DP=121     GT:GQ:DP        0|0:92:30       0|1:100:24      0|0:100:69
+16     17731785        rs2172617       C       G       .       PASS    AA=C;DP=137     GT:GQ:DP        0|0:92:30       0|1:100:24      0|0:100:85
+9      18067185        rs9987765       T       G       .       PASS    AA=T;DP=144     GT:GQ:DP        0|0:92:30       0|1:100:24      0|0:100:90
+18     49271625        rs1910129       C       T       .       PASS    AA=C;DP=114     GT:GQ:DP        0|0:92:30       0|1:100:25      0|0:100:60
+9      16733453        rs60906399      G       C       .       PASS    AA=G;DP=120     GT:GQ:DP        0|0:92:30       0|1:100:25      0|0:100:64
+11     28411955        .       G       A       .       PASS    AA=g;DP=121     GT:GQ:DP        0|0:92:30       0|1:100:25      0|0:100:67
+16     8691018 rs747329        G       C       .       PASS    AA=G;DP=162     GT:GQ:DP        0|0:92:30       0|1:100:26      0|0:100:59
+12     10853510        .       A       G       .       PASS    AA=A;DP=125     GT:GQ:DP        0|0:92:30       0|1:100:26      0|0:100:71
+4      176320704       rs330512        C       A       .       PASS    AA=C;DP=104     GT:GQ:DP        0|0:92:30       0|1:100:27      0|0:100:45
+4      55034976        rs61424751      G       A       .       PASS    AA=G;DP=146     GT:GQ:DP        0|0:92:30       0|1:100:27      0|0:100:45
+7      70562740        .       G       A       .       PASS    AA=G;DP=136     GT:GQ:DP        0|0:92:30       0|1:100:27      0|0:100:79
+8      131822474       rs11988380      A       G       .       PASS    AA=A;DP=145     GT:GQ:DP        0|0:92:30       0|1:100:28      0|0:100:43
+8      136356050       .       A       G       .       PASS    AA=A;DP=164     GT:GQ:DP        0|0:92:30       0|1:100:28      0|0:100:64
+7      117522616       rs10228816      G       C       .       PASS    AA=C;DP=135     GT:GQ:DP        0|0:92:30       0|1:100:28      0|0:100:78
+5      133788886       .       C       T       .       PASS    AA=C;DP=136     GT:GQ:DP        0|0:92:30       0|1:100:28      0|0:100:79
+4      173503925       .       C       T       .       PASS    AA=C;DP=148     GT:GQ:DP        0|0:92:30       0|1:100:28      0|0:100:89
+16     47503944        .       A       T       .       PASS    AA=A;DP=144     GT:GQ:DP        0|0:92:30       0|1:100:29      0|0:100:46
+3      127806367       rs13319957      T       C       .       PASS    AA=T;DP=136     GT:GQ:DP        0|0:92:30       0|1:100:29      0|0:100:80
+3      146124204       rs55978333      T       C       .       PASS    AA=C;DP=141     GT:GQ:DP        0|0:92:30       0|1:100:29      0|0:100:83
+8      25831554        rs7820139       C       T       .       PASS    AA=C;DP=130     GT:GQ:DP        0|0:92:30       0|1:100:30      0|0:100:70
+10     28135899        .       G       T       .       PASS    AA=G;DP=133     GT:GQ:DP        0|0:92:30       0|1:100:30      0|0:100:73
+5      140269482       rs6870083       C       G       .       PASS    AA=C;DP=116     GT:GQ:DP        0|0:92:30       0|1:100:32      0|0:100:55
+21     27742463        rs11911169      C       T       .       PASS    AA=C;DP=138     GT:GQ:DP        0|0:92:30       0|1:100:32      0|0:100:77
+1      76465289        rs3011990       A       C       .       PASS    AA=C;DP=138;HM2 GT:GQ:DP        0|0:92:30       0|1:100:33      0|0:100:79
+13     18656911        rs2880529       A       G       .       PASS    AA=A;DP=140     GT:GQ:DP        0|0:92:30       0|1:100:35      0|0:100:77
+5      90677925        .       T       A       .       PASS    AA=T;DP=150     GT:GQ:DP        0|0:92:30       0|1:100:37      0|0:100:42
+18     5884264 rs7506380       T       C       .       PASS    AA=T;DP=148     GT:GQ:DP        0|0:92:30       0|1:100:37      0|0:100:83
+9      34154058        rs28479496      T       A       .       PASS    AA=T;DP=151     GT:GQ:DP        0|0:92:30       0|1:100:38      0|0:100:83
+13     104610158       rs9558504       A       G       .       PASS    AA=G;DP=103     GT:GQ:DP        0|0:92:30       1|0:100:14      0|1:100:54
+22     31077415        .       G       C       .       PASS    AA=G;DP=101     GT:GQ:DP        0|0:92:30       1|0:100:14      0|1:100:57
+2      88510661        rs10153639      G       A       .       PASS    AA=G;DP=119     GT:GQ:DP        0|0:92:30       1|0:100:15      0|1:100:34
+11     132673635       rs60656070      C       A       .       PASS    AA=C;DP=105     GT:GQ:DP        0|0:92:30       1|0:100:15      0|1:100:59
+1      24592640        .       G       A       .       PASS    AA=G;DP=111     GT:GQ:DP        0|0:92:30       1|0:100:15      0|1:100:67
+11     75613241        rs59477197      G       C       .       PASS    AA=g;DP=134     GT:GQ:DP        0|0:92:30       1|0:100:15      0|1:100:92
+12     86036841        rs7954553       C       T       .       PASS    AA=C;DP=94      GT:GQ:DP        0|0:92:30       1|0:100:16      0|1:100:49
+10     61912484        rs10821771      C       T       .       PASS    AA=C;DP=101     GT:GQ:DP        0|0:92:30       1|0:100:16      0|1:100:55
+10     132921684       rs7095957       C       T       .       PASS    AA=C;DP=104     GT:GQ:DP        0|0:92:30       1|0:100:16      0|1:100:57
+8      95999513        rs61365312      A       G       .       PASS    AA=A;DP=102     GT:GQ:DP        0|0:92:30       1|0:100:16      0|1:100:58
+2      81385759        rs13398367      A       G       .       PASS    AA=A;DP=130     GT:GQ:DP        0|0:92:30       1|0:100:16      0|1:100:85
+4      92395234        .       C       A       .       PASS    AA=C;DP=99      GT:GQ:DP        0|0:92:30       1|0:100:17      0|1:100:51
+3      196263683       rs6785291       A       T       .       PASS    AA=T;DP=142     GT:GQ:DP        0|0:92:30       1|0:100:17      0|1:100:56
+5      152567751       rs9968680       C       T       .       PASS    AA=T;DP=107     GT:GQ:DP        0|0:92:30       1|0:100:17      0|1:100:58
+1      181108404       rs16865325      T       G       .       PASS    AA=G;DP=121;HM2 GT:GQ:DP        0|0:92:30       1|0:100:18      0|1:100:56
+13     40802269        rs9532790       T       G       .       PASS    AA=T;DP=104     GT:GQ:DP        0|0:92:30       1|0:100:18      0|1:100:58
+4      174342591       .       G       T       .       PASS    AA=G;DP=106     GT:GQ:DP        0|0:92:30       1|0:100:18      0|1:100:60
+4      26561151        rs57668778      C       T       .       PASS    AA=C;DP=111     GT:GQ:DP        0|0:92:30       1|0:100:18      0|1:100:63
+13     112644937       rs55703030      C       T       .       PASS    AA=T;DP=124     GT:GQ:DP        0|0:92:30       1|0:100:18      0|1:100:73
+11     125575871       .       A       G       .       PASS    AA=G;DP=108     GT:GQ:DP        0|0:92:30       1|0:100:19      0|1:100:57
+10     130894755       rs11016708      T       A       .       PASS    AA=T;DP=107     GT:GQ:DP        0|0:92:30       1|0:100:19      0|1:100:63
+10     109400476       rs11193583      A       G       .       PASS    AA=A;DP=118     GT:GQ:DP        0|0:92:30       1|0:100:19      0|1:100:72
+3      52607133        rs12107484      T       C       .       PASS    AA=T;DP=123     GT:GQ:DP        0|0:92:30       1|0:100:19      0|1:100:74
+1      81507773        .       C       G       .       PASS    AA=C;DP=131     GT:GQ:DP        0|0:92:30       1|0:100:19      0|1:100:82
+19     19582326        .       G       T       .       PASS    AA=G;DP=105     GT:GQ:DP        0|0:92:30       1|0:100:20      0|1:100:57
+11     116277697       .       G       C       .       PASS    AA=G;DP=111     GT:GQ:DP        0|0:92:30       1|0:100:20      0|1:100:60
+2      34026496        rs60835838      T       G       .       PASS    AA=T;DP=115     GT:GQ:DP        0|0:92:30       1|0:100:20      0|1:100:66
+7      67218990        rs58464071      G       A       .       PASS    AA=G;DP=127     GT:GQ:DP        0|0:92:30       1|0:100:20      0|1:100:76
+1      76322211        rs1890968       C       G       .       PASS    AA=C;DP=111;HM2;HM3     GT:GQ:DP        0|0:92:30       1|0:100:21      0|1:100:61
+6      106986457       rs9480666       G       A       .       PASS    AA=A;DP=115     GT:GQ:DP        0|0:92:30       1|0:100:21      0|1:100:63
+4      107439371       .       A       G       .       PASS    AA=A;DP=122     GT:GQ:DP        0|0:92:30       1|0:100:21      0|1:100:71
+1      195303860       rs1412631       T       C       .       PASS    AA=t;DP=124;HM2 GT:GQ:DP        0|0:92:30       1|0:100:21      0|1:100:77
+6      88902624        .       A       G       .       PASS    AA=A;DP=138     GT:GQ:DP        0|0:92:30       1|0:100:21      0|1:100:87
+12     89703373        .       A       G       .       PASS    AA=a;DP=94      GT:GQ:DP        0|0:92:30       1|0:100:22      0|1:100:32
+5      87072832        .       T       C       .       PASS    AA=T;DP=104     GT:GQ:DP        0|0:92:30       1|0:100:22      0|1:100:55
+1      242032216       rs9428977       C       A       .       PASS    AA=C;DP=113;HM2;HM3     GT:GQ:DP        0|0:92:30       1|0:100:22      0|1:100:60
+16     78165030        rs16950710      C       G       .       PASS    AA=C;DP=115     GT:GQ:DP        0|0:92:30       1|0:100:22      0|1:100:61
+2      171234374       rs2883785       T       G       .       PASS    AA=T;DP=113     GT:GQ:DP        0|0:92:30       1|0:100:22      0|1:100:61
+4      9780585 rs7686718       T       C       .       PASS    AA=T;DP=114     GT:GQ:DP        0|0:92:30       1|0:100:22      0|1:100:64
+19     47781891        rs8100511       A       T       .       PASS    AA=A;DP=119     GT:GQ:DP        0|0:92:30       1|0:100:22      0|1:100:67
+7      67481736        .       C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        0|0:92:30       1|0:100:22      0|1:100:67
+4      26410150        rs10032403      T       A       .       PASS    AA=T;DP=119     GT:GQ:DP        0|0:92:30       1|0:100:22      0|1:100:68
+20     21909964        rs6036003       G       A       .       PASS    AA=A;DP=124     GT:GQ:DP        0|0:92:30       1|0:100:22      0|1:100:71
+1      78942392        .       G       T       .       PASS    AA=G;DP=126     GT:GQ:DP        0|0:92:30       1|0:100:22      0|1:100:75
+10     78912155        .       A       G       .       PASS    AA=A;DP=133     GT:GQ:DP        0|0:92:30       1|0:100:22      0|1:100:81
+21     29679365        rs2832308       G       T       .       PASS    AA=T;DP=133     GT:GQ:DP        0|0:92:30       1|0:100:22      0|1:100:83
+1      86262678        rs58824912      A       G       .       PASS    AA=A;DP=99      GT:GQ:DP        0|0:92:30       1|0:100:23      0|1:100:46
+6      120995791       rs1767482       A       G       .       PASS    AA=G;DP=106     GT:GQ:DP        0|0:92:30       1|0:100:23      0|1:100:55
+7      130659548       rs10233294      G       C       .       PASS    AA=G;DP=137     GT:GQ:DP        0|0:92:30       1|0:100:23      0|1:100:84
+8      133268593       rs58417923      G       T       .       PASS    AA=G;DP=133     GT:GQ:DP        0|0:92:30       1|0:100:23      0|1:100:84
+1      93826561        rs12740779      A       G       .       PASS    AA=G;DP=143     GT:GQ:DP        0|0:92:30       1|0:100:23      0|1:100:93
+7      40855565        rs6963162       G       A       .       PASS    AA=A;DP=143     GT:GQ:DP        0|0:92:30       1|0:100:24      0|1:100:50
+2      101996072       rs2110562       A       G       .       PASS    AA=G;DP=121     GT:GQ:DP        0|0:92:30       1|0:100:24      0|1:100:60
+6      45776778        rs7749622       T       C       .       PASS    AA=T;DP=113     GT:GQ:DP        0|0:92:30       1|0:100:24      0|1:100:61
+2      60313038        .       C       T       .       PASS    AA=C;DP=119     GT:GQ:DP        0|0:92:30       1|0:100:24      0|1:100:64
+10     110137284       rs4636590       A       G       .       PASS    AA=A;DP=120     GT:GQ:DP        0|0:92:30       1|0:100:24      0|1:100:65
+8      58534766        rs10108129      C       T       .       PASS    AA=c;DP=126     GT:GQ:DP        0|0:92:30       1|0:100:24      0|1:100:72
+13     92308832        .       T       C       .       PASS    AA=T;DP=128     GT:GQ:DP        0|0:92:30       1|0:100:24      0|1:100:74
+16     5654855 .       T       C       .       PASS    AA=T;DP=132     GT:GQ:DP        0|0:92:30       1|0:100:24      0|1:100:77
+3      30821228        rs61049926      C       T       .       PASS    AA=C;DP=142     GT:GQ:DP        0|0:92:30       1|0:100:24      0|1:100:88
+19     33870845        .       T       C       .       PASS    AA=T;DP=111     GT:GQ:DP        0|0:92:30       1|0:100:25      0|1:100:55
+19     35585880        rs8105728       G       A       .       PASS    AA=G;DP=115     GT:GQ:DP        0|0:92:30       1|0:100:25      0|1:100:61
+4      26778365        .       C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        0|0:92:30       1|0:100:25      0|1:100:66
+5      115678531       .       T       G       .       PASS    AA=T;DP=122     GT:GQ:DP        0|0:92:30       1|0:100:25      0|1:100:68
+13     42144013        .       T       C       .       PASS    AA=T;DP=128     GT:GQ:DP        0|0:92:30       1|0:100:25      0|1:100:74
+3      119822022       rs4528931       C       G       .       PASS    AA=G;DP=140     GT:GQ:DP        0|0:92:30       1|0:100:26      0|1:100:41
+10     1905372 .       C       A       .       PASS    AA=C;DP=104     GT:GQ:DP        0|0:92:30       1|0:100:26      0|1:100:49
+1      102383863       rs6677248       T       A       .       PASS    AA=T;DP=118;HM2 GT:GQ:DP        0|0:92:30       1|0:100:26      0|1:100:65
+18     36272349        rs4459621       G       A       .       PASS    AA=A;DP=131     GT:GQ:DP        0|0:92:30       1|0:100:26      0|1:100:76
+8      140574076       .       C       T       .       PASS    AA=C;DP=148     GT:GQ:DP        0|0:92:30       1|0:100:26      0|1:100:94
+22     22050420        rs5019659       T       C       .       PASS    AA=c;DP=139     GT:GQ:DP        0|0:92:30       1|0:100:27      0|1:100:39
+10     29744697        .       G       C       .       PASS    AA=G;DP=141     GT:GQ:DP        0|0:92:30       1|0:100:27      0|1:100:44
+12     84693914        .       C       G       .       PASS    AA=C;DP=105     GT:GQ:DP        0|0:92:30       1|0:100:27      0|1:100:50
+8      135158906       .       T       A       .       PASS    AA=T;DP=117     GT:GQ:DP        0|0:92:30       1|0:100:27      0|1:100:59
+13     54204996        .       G       A       .       PASS    AA=G;DP=117     GT:GQ:DP        0|0:92:30       1|0:100:27      0|1:100:60
+6      120676165       rs3013675       T       G       .       PASS    AA=T;DP=119     GT:GQ:DP        0|0:92:30       1|0:100:27      0|1:100:63
+6      99375799        .       G       A       .       PASS    AA=G;DP=124     GT:GQ:DP        0|0:92:30       1|0:100:27      0|1:100:66
+2      81765173        rs59850527      A       G       .       PASS    AA=A;DP=124     GT:GQ:DP        0|0:92:30       1|0:100:27      0|1:100:68
+4      161305691       rs12331818      C       T       .       PASS    AA=T;DP=124     GT:GQ:DP        0|0:92:30       1|0:100:27      0|1:100:69
+4      90587466        .       G       T       .       PASS    AA=G;DP=148     GT:GQ:DP        0|0:92:30       1|0:100:28      0|1:100:47
+4      21425426        rs13122849      G       A       .       PASS    AA=G;DP=130     GT:GQ:DP        0|0:92:30       1|0:100:28      0|1:100:71
+15     60762664        rs34716172      G       C       .       PASS    AA=G;DP=130     GT:GQ:DP        0|0:92:30       1|0:100:30      0|1:100:59
+9      83156057        .       A       G       .       PASS    AA=A;DP=140     GT:GQ:DP        0|0:92:30       1|0:100:30      0|1:100:80
+13     42214377        rs4497568       T       C       .       PASS    AA=t;DP=144     GT:GQ:DP        0|0:92:30       1|0:100:30      0|1:100:85
+1      75491589        rs1768544       A       G       .       PASS    AA=A;DP=148;HM2;HM3     GT:GQ:DP        0|0:92:30       1|0:100:30      0|1:100:86
+4      7168180 .       C       T       .       PASS    AA=N;DP=151     GT:GQ:DP        0|0:92:30       1|0:100:30      0|1:100:93
+8      21898009        rs13248727      T       C       .       PASS    AA=T;DP=134     GT:GQ:DP        0|0:92:30       1|0:100:31      0|1:100:75
+5      12173047        rs34213163      T       A       .       PASS    AA=T;DP=151     GT:GQ:DP        0|0:92:30       1|0:100:31      0|1:100:88
+10     64208549        .       A       G       .       PASS    AA=A;DP=151     GT:GQ:DP        0|0:92:30       1|0:100:31      0|1:100:92
+11     60030613        rs59239646      A       C       .       PASS    AA=A;DP=120     GT:GQ:DP        0|0:92:30       1|0:100:32      0|1:100:55
+7      108350570       .       G       T       .       PASS    AA=G;DP=123     GT:GQ:DP        0|0:92:30       1|0:100:32      0|1:100:58
+11     42446719        rs10501288      G       A       .       PASS    AA=G;DP=135     GT:GQ:DP        0|0:92:30       1|0:100:33      0|1:100:72
+12     90982417        .       A       G       .       PASS    AA=A;DP=158     GT:GQ:DP        0|0:92:30       1|0:100:33      0|1:100:98
+3      172563836       rs2422225       A       T       .       PASS    AA=A;DP=138     GT:GQ:DP        0|0:92:30       1|0:100:34      0|1:100:73
+9      114715104       .       A       G       .       PASS    AA=A;DP=143     GT:GQ:DP        0|0:92:30       1|0:100:35      0|1:100:80
+7      38950069        .       C       T       .       PASS    AA=C;DP=133     GT:GQ:DP        0|0:92:30       1|0:100:36      0|1:100:69
+14     97095329        rs10149160      T       C       .       PASS    AA=C;DP=146     GT:GQ:DP        0|0:92:30       1|0:100:37      0|1:100:35
+7      48960841        .       C       A       .       PASS    AA=C;DP=157     GT:GQ:DP        0|0:92:30       1|0:100:40      0|1:100:85
+1      245741925       rs7548506       C       T       .       PASS    AA=C;DP=151     GT:GQ:DP        0|0:92:30       1|0:100:46      0|1:100:76
+5      162069560       .       G       T       .       PASS    AA=G;DP=127     GT:GQ:DP        0|0:92:30       1|0:11:20       0|1:100:80
+1      57439818        .       C       A       .       PASS    AA=C;DP=119     GT:GQ:DP        0|0:92:30       1|0:27:19       0|1:100:66
+22     47891952        rs17000399      G       A       .       PASS    AA=g;DP=125     GT:GQ:DP        0|0:92:30       1|0:31:9        0|1:100:81
+16     85486755        rs60536990      C       G       .       PASS    AA=C;DP=117     GT:GQ:DP        0|0:92:30       1|0:33:15       0|1:100:70
+4      149339274       rs7693077       G       T       .       PASS    AA=G;DP=126     GT:GQ:DP        0|0:92:30       1|0:37:15       0|1:100:38
+1      194480735       .       G       A       .       PASS    AA=G;DP=122     GT:GQ:DP        0|0:92:30       1|0:41:20       0|1:100:72
+8      109919164       .       G       A       .       PASS    AA=G;DP=104     GT:GQ:DP        0|0:92:30       1|0:45:13       0|1:100:61
+10     6035464 rs8177742       A       G       .       PASS    AA=G;DP=107     GT:GQ:DP        0|0:92:30       1|0:50:10       0|1:100:67
+3      13278616        .       A       C       .       PASS    AA=A;DP=109     GT:GQ:DP        0|0:92:30       1|0:54:10       0|1:100:54
+4      148880103       rs9997304       C       T       .       PASS    AA=C;DP=123     GT:GQ:DP        0|0:92:30       1|0:54:32       0|1:100:63
+19     13253333        .       C       A       .       PASS    AA=T;DP=98      GT:GQ:DP        0|0:92:30       1|0:56:11       0|1:100:57
+8      32923115        rs13255644      C       T       .       PASS    AA=c;DP=117     GT:GQ:DP        0|0:92:30       1|0:69:17       0|1:100:70
+8      121818774       .       G       A       .       PASS    AA=G;DP=105     GT:GQ:DP        0|0:92:30       1|0:74:14       0|1:100:61
+2      64933002        rs6748097       G       A       .       PASS    AA=G;DP=116     GT:GQ:DP        0|0:92:30       1|0:74:21       0|1:100:66
+11     34208687        .       G       C       .       PASS    AA=G;DP=112     GT:GQ:DP        0|0:92:30       1|0:75:19       0|1:100:63
+12     109778903       rs11065733      A       G       .       PASS    AA=A;DP=110     GT:GQ:DP        0|0:92:30       1|0:76:19       0|1:100:61
+20     895625  .       G       A       .       PASS    AA=G;DP=135     GT:GQ:DP        0|0:92:30       1|0:78:19       0|1:100:47
+6      24758605        rs16889567      C       T       .       PASS    AA=C;DP=121     GT:GQ:DP        0|0:92:30       1|0:78:30       0|1:100:63
+7      42734758        rs12672681      G       C       .       PASS    AA=G;DP=122     GT:GQ:DP        0|0:92:30       1|0:79:22       0|1:100:69
+9      5068117 rs1159782       T       C       .       PASS    AA=T;DP=109     GT:GQ:DP        0|0:92:30       1|0:80:17       0|1:100:63
+11     24400000        .       G       A       .       PASS    AA=G;DP=120     GT:GQ:DP        0|0:92:30       1|0:80:19       0|1:100:72
+5      25477199        .       T       C       .       PASS    AA=T;DP=101     GT:GQ:DP        0|0:92:30       1|0:82:16       0|1:100:42
+5      158996001       .       T       C       .       PASS    AA=T;DP=98      GT:GQ:DP        0|0:92:30       1|0:83:21       0|1:100:49
+1      230535980       .       C       T       .       PASS    AA=C;DP=113     GT:GQ:DP        0|0:92:30       1|0:84:19       0|1:100:64
+10     128469116       .       G       A       .       PASS    AA=G;DP=97      GT:GQ:DP        0|0:92:30       1|0:85:17       0|1:100:50
+2      34358984        rs1978414       C       T       .       PASS    AA=T;DP=126     GT:GQ:DP        0|0:92:30       1|0:85:25       0|1:100:75
+7      29278707        rs7803622       G       A       .       PASS    AA=A;DP=124     GT:GQ:DP        0|0:92:30       1|0:87:13       0|1:100:79
+2      130206474       rs56966537      G       A       .       PASS    AA=g;DP=117     GT:GQ:DP        0|0:92:30       1|0:88:30       0|1:100:57
+4      6895941 .       A       G       .       PASS    AA=A;DP=122     GT:GQ:DP        0|0:92:30       1|0:89:15       0|1:100:79
+2      6320480 .       A       C       .       PASS    AA=A;DP=111     GT:GQ:DP        0|0:92:30       1|0:89:16       0|1:100:66
+6      65932478        rs6910540       C       G       .       PASS    AA=C;DP=136     GT:GQ:DP        0|0:92:30       1|0:89:17       0|1:100:83
+10     74092862        .       G       T       .       PASS    AA=g;DP=109     GT:GQ:DP        0|0:92:30       1|0:92:18       0|1:100:61
+1      180867309       rs629954        T       C       .       PASS    AA=C;DP=106     GT:GQ:DP        0|0:92:30       1|0:93:23       0|1:100:53
+8      108592880       rs12541820      G       T       .       PASS    AA=G;DP=119     GT:GQ:DP        0|0:92:30       1|0:94:14       0|1:100:77
+4      155192518       rs6535980       T       C       .       PASS    AA=T;DP=112     GT:GQ:DP        0|0:92:30       1|0:94:23       0|1:100:59
+9      27304357        rs16911379      A       G       .       PASS    AA=A;DP=135     GT:GQ:DP        0|0:92:30       1|0:96:22       0|1:100:81
+13     110568593       .       C       G       .       PASS    AA=C;DP=135     GT:GQ:DP        0|0:92:30       1|0:98:17       0|1:100:48
+6      13457253        rs6919374       G       T       .       PASS    AA=G;DP=112     GT:GQ:DP        0|0:92:30       1|0:99:12       0|1:100:34
+3      191551570       rs11922773      C       T       .       PASS    AA=T;DP=127     GT:GQ:DP        0|0:92:31       0|1:100:14      0|0:100:43
+3      33479937        .       A       G       .       PASS    AA=G;DP=118     GT:GQ:DP        0|0:92:31       0|1:100:19      0|0:100:70
+8      25212519        rs17053341      A       G       .       PASS    AA=A;DP=106     GT:GQ:DP        0|0:92:31       0|1:100:20      0|0:100:54
+4      33269622        .       G       A       .       PASS    AA=G;DP=120     GT:GQ:DP        0|0:92:31       0|1:100:20      0|0:100:71
+9      19274148        rs10811163      T       C       .       PASS    AA=T;DP=137     GT:GQ:DP        0|0:92:31       0|1:100:24      0|0:100:40
+7      84062941        .       A       G       .       PASS    AA=A;DP=140     GT:GQ:DP        0|0:92:31       0|1:100:24      0|0:100:88
+11     35346063        rs4287314       C       T       .       PASS    AA=T;DP=118     GT:GQ:DP        0|0:92:31       0|1:100:25      0|0:100:59
+1      5879042 .       T       C       .       PASS    AA=T;DP=133     GT:GQ:DP        0|0:92:31       0|1:100:25      0|0:100:76
+2      179819467       .       C       T       .       PASS    AA=c;DP=133     GT:GQ:DP        0|0:92:31       0|1:100:28      0|0:100:76
+9      4825010 rs10974806      G       A       .       PASS    AA=G;DP=165     GT:GQ:DP        0|0:92:31       0|1:100:29      0|0:100:49
+2      174582408       rs56129480      T       C       .       PASS    AA=T;DP=103     GT:GQ:DP        0|0:92:31       0|1:100:29      0|0:99:34
+5      110826961       rs168758        G       C       .       PASS    AA=G;DP=145     GT:GQ:DP        0|0:92:31       0|1:100:31      0|0:100:43
+11     4955321 .       A       G       .       PASS    AA=A;DP=144     GT:GQ:DP        0|0:92:31       0|1:100:33      0|0:100:39
+19     53414390        rs10412481      G       C       .       PASS    AA=G;DP=84      GT:GQ:DP        0|0:92:31       1|0:100:10      0|1:100:32
+17     39127117        rs12937489      C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        0|0:92:31       1|0:100:11      0|1:100:78
+21     28889724        rs11910915      T       C       .       PASS    AA=T;DP=106     GT:GQ:DP        0|0:92:31       1|0:100:13      0|1:100:61
+17     72207581        rs34122063      G       A       .       PASS    AA=G;DP=128     GT:GQ:DP        0|0:92:31       1|0:100:14      0|1:100:82
+16     53671878        rs748796        G       A       .       PASS    AA=G;DP=119     GT:GQ:DP        0|0:92:31       1|0:100:16      0|1:100:70
+20     29436477        rs6120047       C       T       .       PASS    AA=C;DP=105     GT:GQ:DP        0|0:92:31       1|0:100:17      0|1:100:58
+13     106550748       rs9520298       A       T       .       PASS    AA=A;DP=139     GT:GQ:DP        0|0:92:31       1|0:100:18      0|1:100:39
+2      136893930       rs608987        A       G       .       PASS    AA=A;DP=120     GT:GQ:DP        0|0:92:31       1|0:100:18      0|1:100:67
+17     68644340        rs10153299      A       G       .       PASS    AA=G;DP=137     GT:GQ:DP        0|0:92:31       1|0:100:19      0|1:100:88
+4      53984449        rs10023613      A       G       .       PASS    AA=A;DP=97      GT:GQ:DP        0|0:92:31       1|0:100:20      0|1:100:46
+3      195222199       .       C       T       .       PASS    AA=T;DP=120     GT:GQ:DP        0|0:92:31       1|0:100:20      0|1:100:68
+5      96127749        .       C       T       .       PASS    AA=C;DP=122     GT:GQ:DP        0|0:92:31       1|0:100:20      0|1:100:74
+15     56349343        .       G       C       .       PASS    AA=G;DP=120     GT:GQ:DP        0|0:92:31       1|0:100:21      0|1:100:69
+16     78358263        rs7190102       T       C       .       PASS    AA=T;DP=127     GT:GQ:DP        0|0:92:31       1|0:100:21      0|1:100:72
+12     108601255       rs11067829      A       G       .       PASS    AA=a;DP=128     GT:GQ:DP        0|0:92:31       1|0:100:22      0|1:100:73
+1      17360110        .       C       T       .       PASS    AA=C;DP=129     GT:GQ:DP        0|0:92:31       1|0:100:22      0|1:100:79
+13     44969221        rs3014951       T       C       .       PASS    AA=T;DP=122     GT:GQ:DP        0|0:92:31       1|0:100:23      0|1:100:70
+22     27433606        rs6005842       A       T       .       PASS    AA=A;DP=130     GT:GQ:DP        0|0:92:31       1|0:100:23      0|1:100:76
+8      95337170        .       C       T       .       PASS    AA=C;DP=137     GT:GQ:DP        0|0:92:31       1|0:100:24      0|1:100:82
+6      12692057        .       A       T       .       PASS    AA=A;DP=98      GT:GQ:DP        0|0:92:31       1|0:100:25      0|1:100:42
+18     66005434        rs283244        G       C       .       PASS    AA=G;DP=109     GT:GQ:DP        0|0:92:31       1|0:100:26      0|1:100:52
+4      11485219        rs6448845       C       T       .       PASS    AA=c;DP=115     GT:GQ:DP        0|0:92:31       1|0:100:26      0|1:100:56
+8      128014346       .       T       C       .       PASS    AA=T;DP=111     GT:GQ:DP        0|0:92:31       1|0:100:26      0|1:100:56
+5      403277  rs6879758       G       C       .       PASS    AA=G;DP=114     GT:GQ:DP        0|0:92:31       1|0:100:26      0|1:100:57
+12     94953914        rs2540487       C       T       .       PASS    AA=C;DP=116     GT:GQ:DP        0|0:92:31       1|0:100:26      0|1:100:58
+5      117926503       rs60150005      T       C       .       PASS    AA=T;DP=124     GT:GQ:DP        0|0:92:31       1|0:100:26      0|1:100:67
+15     33934276        rs16961843      A       C       .       PASS    AA=A;DP=130     GT:GQ:DP        0|0:92:31       1|0:100:26      0|1:100:74
+22     16748074        rs1076114       G       C       .       PASS    AA=G;DP=160     GT:GQ:DP        0|0:92:31       1|0:100:27      0|1:100:44
+5      62532048        rs57245337      G       A       .       PASS    AA=G;DP=133     GT:GQ:DP        0|0:92:31       1|0:100:27      0|1:100:75
+5      88288584        .       G       A       .       PASS    AA=G;DP=142     GT:GQ:DP        0|0:92:31       1|0:100:29      0|1:100:41
+2      36351769        rs17387739      C       T       .       PASS    AA=T;DP=127     GT:GQ:DP        0|0:92:31       1|0:100:29      0|1:100:68
+2      152986047       rs16831100      G       A       .       PASS    AA=G;DP=142     GT:GQ:DP        0|0:92:31       1|0:100:29      0|1:100:83
+5      132882341       rs35320788      C       G       .       PASS    AA=C;DP=142     GT:GQ:DP        0|0:92:31       1|0:100:30      0|1:100:31
+5      64589136        rs28668482      G       A       .       PASS    AA=A;DP=141     GT:GQ:DP        0|0:92:31       1|0:100:31      0|1:100:39
+22     25559977        rs5761780       A       G       .       PASS    AA=A;DP=161     GT:GQ:DP        0|0:92:31       1|0:100:33      0|1:100:51
+19     14065135        rs3729859       G       C       .       PASS    AA=G;DP=148     GT:GQ:DP        0|0:92:31       1|0:100:34      0|1:100:85
+10     26727843        .       C       T       .       PASS    AA=c;DP=113     GT:GQ:DP        0|0:92:31       1|0:21:14       0|1:100:69
+2      4427245 .       A       G       .       PASS    AA=A;DP=97      GT:GQ:DP        0|0:92:31       1|0:23:12       0|1:100:54
+16     83500091        rs9933521       C       T       .       PASS    AA=C;DP=99      GT:GQ:DP        0|0:92:31       1|0:26:10       0|1:100:56
+2      70037010        .       G       A       .       PASS    AA=G;DP=96      GT:GQ:DP        0|0:92:31       1|0:31:13       0|1:100:53
+16     73025194        rs11641117      C       T       .       PASS    AA=T;DP=147     GT:GQ:DP        0|0:92:31       1|0:55:19       0|1:100:53
+19     22420326        rs10420731      A       T       .       PASS    AA=a;DP=112     GT:GQ:DP        0|0:92:31       1|0:57:17       0|1:100:64
+21     41218782        .       G       A       .       PASS    AA=G;DP=133     GT:GQ:DP        0|0:92:31       1|0:59:17       0|1:100:82
+13     79814857        rs7981906       C       A       .       PASS    AA=C;DP=91      GT:GQ:DP        0|0:92:31       1|0:60:15       0|1:100:42
+10     30668346        rs59372240      G       A       .       PASS    AA=G;DP=124     GT:GQ:DP        0|0:92:31       1|0:62:20       0|1:100:75
+16     85559702        rs61011333      G       A       .       PASS    AA=A;DP=111     GT:GQ:DP        0|0:92:31       1|0:67:24       0|1:100:57
+19     828493  .       C       T       .       PASS    AA=c;DP=105     GT:GQ:DP        0|0:92:31       1|0:69:11       0|1:100:65
+7      21917724        rs11974678      G       A       .       PASS    AA=g;DP=140     GT:GQ:DP        0|0:92:31       1|0:70:20       0|1:100:83
+6      85353905        .       T       C       .       PASS    AA=T;DP=93      GT:GQ:DP        0|0:92:31       1|0:79:11       0|1:89:47
+2      75058381        rs4330128       G       A       .       PASS    AA=G;DP=135     GT:GQ:DP        0|0:92:31       1|0:80:17       0|1:100:85
+8      133738701       .       C       T       .       PASS    AA=C;DP=124     GT:GQ:DP        0|0:92:31       1|0:83:21       0|1:100:68
+8      75332904        rs16938840      G       A       .       PASS    AA=G;DP=104     GT:GQ:DP        0|0:92:31       1|0:89:18       0|1:100:57
+10     119567730       .       T       C       .       PASS    AA=T;DP=146     GT:GQ:DP        0|0:92:31       1|0:91:22       0|1:100:40
+10     66846854        rs1857611       G       A       .       PASS    AA=A;DP=117     GT:GQ:DP        0|0:92:32       0|1:100:21      0|0:100:64
+5      136742084       rs60366474      A       G       .       PASS    AA=G;DP=147     GT:GQ:DP        0|0:92:32       0|1:100:32      0|0:100:78
+9      36824277        rs2812326       T       C       .       PASS    AA=T;DP=100     GT:GQ:DP        0|0:92:32       1|0:100:17      0|1:100:45
+10     12896353        rs56995702      G       A       .       PASS    AA=G;DP=101     GT:GQ:DP        0|0:92:32       1|0:100:18      0|1:100:51
+18     42377590        rs9956148       C       T       .       PASS    AA=C;DP=146     GT:GQ:DP        0|0:92:32       1|0:100:24      0|1:100:85
+4      152847395       .       T       C       .       PASS    AA=T;DP=117     GT:GQ:DP        0|0:92:32       1|0:100:29      0|1:100:56
+4      36071420        .       C       T       .       PASS    AA=T;DP=134     GT:GQ:DP        0|0:92:32       1|0:100:29      0|1:100:71
+2      22145744        rs1607268       A       G       .       PASS    AA=A;DP=151     GT:GQ:DP        0|0:92:32       1|0:100:29      0|1:100:80
+9      124176047       rs12004533      A       G       .       PASS    AA=N;DP=119     GT:GQ:DP        0|0:92:32       1|0:32:13       0|1:100:75
+15     48447126        rs2078139       C       T       .       PASS    AA=C;DP=114     GT:GQ:DP        0|0:92:32       1|0:44:15       0|1:100:65
+5      15772769        rs4235554       G       A       .       PASS    AA=G;DP=131     GT:GQ:DP        0|0:92:32       1|0:74:24       0|1:100:61
+8      102376676       rs11988573      C       T       .       PASS    AA=C;DP=155     GT:GQ:DP        0|0:92:32       1|0:77:20       0|1:100:53
+22     16917041        rs9605514       G       A       .       PASS    AA=G;DP=142     GT:GQ:DP        0|0:92:32       1|0:83:25       0|1:100:85
+12     42653752        rs57781916      A       G       .       PASS    AA=A;DP=133     GT:GQ:DP        0|0:92:32       1|0:86:20       0|1:100:82
+13     22760826        rs9550948       C       T       .       PASS    AA=C;DP=125     GT:GQ:DP        0|0:92:32       1|0:90:23       0|1:100:68
+3      188961398       .       G       A       .       PASS    AA=G;DP=118     GT:GQ:DP        0|0:92:32       1|0:98:21       0|1:100:68
+7      145113380       rs6951353       C       T       .       PASS    AA=C;DP=128     GT:GQ:DP        0|0:92:33       1|0:100:23      0|1:100:72
+9      110989203       .       T       C       .       PASS    AA=T;DP=128     GT:GQ:DP        0|0:92:33       1|0:98:18       0|1:100:80
+4      189271259       rs9990485       A       T       .       PASS    AA=a;DP=141     GT:GQ:DP        0|0:92:34       0|1:100:28      0|0:100:82
+11     110769290       rs58453214      A       C       .       PASS    AA=A;DP=140     GT:GQ:DP        0|0:92:35       0|1:100:19      0|0:100:88
+20     21217547        rs7269648       C       G       .       PASS    AA=C;DP=138     GT:GQ:DP        0|0:92:35       0|1:100:23      0|0:100:82
+14     59124838        rs4901944       G       T       .       PASS    AA=T;DP=143     GT:GQ:DP        0|0:92:35       1|1:76:27       0|1:100:81
+9      26526217        .       A       G       .       PASS    AA=A;DP=127     GT:GQ:DP        0|0:92:36       1|0:100:24      0|1:100:67
+7      98125336        .       A       G       .       PASS    AA=A;DP=123     GT:GQ:DP        0|0:92:36       1|0:64:18       0|1:100:68
+9      110807492       .       C       T       .       PASS    AA=C;DP=146     GT:GQ:DP        0|0:92:37       1|0:100:25      0|1:100:84
+1      201456632       rs57564923      G       A       .       PASS    AA=G;DP=143     GT:GQ:DP        0|0:92:37       1|0:100:26      0|1:100:82
+22     36716663        .       A       G       .       PASS    AA=A;DP=85      GT:GQ:DP        0|0:92:37       1|0:49:10       0|1:7:26
+15     89767208        rs4450375       G       A       .       PASS    AA=G;DP=125     GT:GQ:DP        0|0:92:38       1|1:55:20       0|1:100:67
+3      7445395 rs17047327      G       T       .       PASS    AA=G;DP=138     GT:GQ:DP        0|0:92:39       0|1:100:26      0|0:100:70
+2      139652676       .       G       T       .       PASS    AA=G;DP=133     GT:GQ:DP        0|0:92:39       1|0:100:26      0|1:100:69
+8      65892435        rs56822105      G       T       .       PASS    AA=t;DP=142     GT:GQ:DP        0|0:92:41       0|1:100:29      0|0:100:76
+6      153124048       rs632771        T       A       .       PASS    AA=T;DP=166     GT:GQ:DP        0|0:92:42       0|1:100:33      0|0:100:44
+1      222381489       .       T       G       .       PASS    AA=T;DP=143     GT:GQ:DP        0|0:92:42       1|0:100:17      0|1:100:77
+5      32309123        rs58433883      C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        0|0:92:42       1|0:100:23      0|1:100:56
+7      142534477       .       T       G       .       PASS    AA=G;DP=145     GT:GQ:DP        0|0:92:42       1|0:100:23      0|1:100:80
+7      151923668       rs28367458      G       A       .       PASS    AA=G;DP=149     GT:GQ:DP        0|0:92:42       1|0:56:21       0|1:100:88
+17     25676361        .       A       G       .       PASS    AA=A;DP=141     GT:GQ:DP        0|0:92:45       0|1:100:26      0|0:100:61
+13     19611651        rs60759737      A       G       .       PASS    AA=A;DP=128     GT:GQ:DP        0|0:93:31       1|1:100:36      0|1:100:60
+2      55223351        rs7575639       C       T       .       PASS    AA=T;DP=137     GT:GQ:DP        0|0:93:31       1|1:100:38      0|1:100:70
+16     87061179        rs12935117      G       T       .       PASS    AA=G;DP=114     GT:GQ:DP        0|0:93:31       1|1:12:14       0|1:100:69
+5      179500206       rs7731938       C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        0|0:93:31       1|1:13:14       0|1:100:52
+13     28606169        rs9506111       A       G       .       PASS    AA=A;DP=105     GT:GQ:DP        0|0:93:31       1|1:16:17       0|1:100:58
+10     64431097        rs11597905      A       C       .       PASS    AA=A;DP=104     GT:GQ:DP        0|0:93:31       1|1:25:20       0|1:100:48
+1      217551039       rs4846547       A       G       .       PASS    AA=A;DP=121;HM2 GT:GQ:DP        0|0:93:31       1|1:27:21       0|1:100:70
+9      20218453        rs321220        C       T       .       PASS    AA=T;DP=107     GT:GQ:DP        0|0:93:31       1|1:28:14       0|1:100:61
+15     45854810        rs1993150       A       T       .       PASS    AA=A;DP=127     GT:GQ:DP        0|0:93:31       1|1:39:24       0|1:100:70
+20     61057618        rs2427455       C       G       .       PASS    AA=G;DP=105     GT:GQ:DP        0|0:93:31       1|1:41:16       0|1:100:59
+22     35717203        rs9610624       T       C       .       PASS    AA=T;DP=135     GT:GQ:DP        0|0:93:31       1|1:46:17       0|1:100:45
+1      36935828        rs12754475      C       A       .       PASS    AA=C;DP=123;HM2 GT:GQ:DP        0|0:93:31       1|1:46:17       0|1:100:77
+21     34315491        rs9979439       C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        0|0:93:31       1|1:46:18       0|1:100:73
+10     31732070        rs161281        T       C       .       PASS    AA=T;DP=95      GT:GQ:DP        0|0:93:31       1|1:49:18       0|1:100:46
+15     32317068        rs17817806      A       G       .       PASS    AA=G;DP=128     GT:GQ:DP        0|0:93:31       1|1:49:18       0|1:100:79
+5      10490834        rs1287600       C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        0|0:93:31       1|1:49:19       0|1:100:60
+5      79060478        rs61465432      T       C       .       PASS    AA=T;DP=100     GT:GQ:DP        0|0:93:31       1|1:49:25       0|1:100:44
+17     6302805 rs9895327       G       A       .       PASS    AA=N;DP=131     GT:GQ:DP        0|0:93:31       1|1:50:22       0|1:100:78
+21     30066284        .       A       C       .       PASS    AA=A;DP=127     GT:GQ:DP        0|0:93:31       1|1:51:26       0|1:100:69
+10     10406125        rs61835660      A       G       .       PASS    AA=A;DP=164     GT:GQ:DP        0|0:93:31       1|1:51:28       0|1:100:61
+16     48207577        rs7500184       A       G       .       PASS    AA=A;DP=139     GT:GQ:DP        0|0:93:31       1|1:52:20       0|1:100:91
+3      126348341       rs547902        G       A       .       PASS    AA=G;DP=132     GT:GQ:DP        0|0:93:31       1|1:52:29       0|1:100:71
+18     20333333        rs56938624      C       A       .       PASS    AA=C;DP=115     GT:GQ:DP        0|0:93:31       1|1:55:20       0|1:100:61
+16     51421616        rs11867052      C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        0|0:93:31       1|1:56:31       0|1:100:56
+5      17397236        rs2650923       G       A       .       PASS    AA=G;DP=131     GT:GQ:DP        0|0:93:31       1|1:58:23       0|1:100:77
+15     25040556        rs12899144      G       A       .       PASS    AA=G;DP=152     GT:GQ:DP        0|0:93:31       1|1:61:22       0|1:100:101
+8      55906059        rs1391455       T       C       .       PASS    AA=C;DP=131     GT:GQ:DP        0|0:93:31       1|1:61:22       0|1:100:75
+2      191299791       rs1894774       A       G       .       PASS    AA=G;DP=119     GT:GQ:DP        0|0:93:31       1|1:62:27       0|1:100:60
+4      167501949       .       T       C       .       PASS    AA=T;DP=99      GT:GQ:DP        0|0:93:31       1|1:73:27       0|1:100:44
+8      140683870       .       G       A       .       PASS    AA=G;DP=141     GT:GQ:DP        0|0:93:31       1|1:73:27       0|1:100:86
+8      74186544        rs6989705       A       G       .       PASS    AA=A;DP=126     GT:GQ:DP        0|0:93:31       1|1:76:27       0|1:100:67
+12     16543604        .       G       C       .       PASS    AA=G;DP=126     GT:GQ:DP        0|0:93:31       1|1:76:27       0|1:100:71
+15     99743314        rs8037738       C       G       .       PASS    AA=C;DP=121     GT:GQ:DP        0|0:93:31       1|1:76:28       0|1:100:63
+13     23537512        rs59058768      G       T       .       PASS    AA=G;DP=110     GT:GQ:DP        0|0:93:31       1|1:79:28       0|1:100:51
+13     110885934       rs1163849       T       A       .       PASS    AA=T;DP=139     GT:GQ:DP        0|0:93:31       1|1:79:28       0|1:100:81
+3      8187656 rs13318406      C       A       .       PASS    AA=C;DP=104     GT:GQ:DP        0|0:93:31       1|1:82:29       0|1:100:41
+2      127433915       rs12987830      C       T       .       PASS    AA=T;DP=125     GT:GQ:DP        0|0:93:32       1|0:98:30       0|1:100:63
+8      140904052       rs10107436      G       T       .       PASS    AA=G;DP=106     GT:GQ:DP        0|0:93:32       1|1:14:14       0|1:100:54
+20     24746251        .       G       A       .       PASS    AA=G;DP=83      GT:GQ:DP        0|0:93:32       1|1:19:13       0|1:100:38
+18     74882209        rs12456192      G       A       .       PASS    AA=G;DP=124     GT:GQ:DP        0|0:93:32       1|1:26:17       0|1:100:72
+1      105770337       rs7549518       A       T       .       PASS    AA=A;DP=78;HM2  GT:GQ:DP        0|0:93:32       1|1:27:16       0|1:100:21
+8      64164490        rs6472073       C       A       .       PASS    AA=A;DP=94      GT:GQ:DP        0|0:93:32       1|1:34:13       0|1:100:50
+10     78475602        .       A       G       .       PASS    AA=A;DP=121     GT:GQ:DP        0|0:93:32       1|1:37:15       0|1:100:70
+8      145627466       rs13258903      C       T       .       PASS    AA=C;DP=155     GT:GQ:DP        0|0:93:32       1|1:38:21       0|1:100:51
+11     121130039       rs10790455      C       G       .       PASS    AA=G;DP=120     GT:GQ:DP        0|0:93:32       1|1:40:15       0|1:100:72
+12     126652825       rs345694        T       C       .       PASS    AA=T;DP=119     GT:GQ:DP        0|0:93:32       1|1:42:23       0|1:100:64
+20     43330776        rs6104082       T       C       .       PASS    AA=T;DP=114     GT:GQ:DP        0|0:93:32       1|1:43:16       0|1:100:66
+7      94804103        rs13223537      T       C       .       PASS    AA=T;DP=131     GT:GQ:DP        0|0:93:32       1|1:46:17       0|1:100:82
+3      22879560        .       A       G       .       PASS    AA=A;DP=137     GT:GQ:DP        0|0:93:32       1|1:54:26       0|1:100:80
+21     14940651        rs466464        G       A       .       PASS    AA=A;DP=112     GT:GQ:DP        0|0:93:32       1|1:55:20       0|1:100:57
+3      46091036        .       T       G       .       PASS    AA=T;DP=113     GT:GQ:DP        0|0:93:32       1|1:73:26       0|1:100:56
+3      135813399       rs1880378       T       C       .       PASS    AA=C;DP=168     GT:GQ:DP        0|0:93:32       1|1:73:34       0|1:100:47
+15     34379945        rs17699258      T       A       .       PASS    AA=T;DP=129     GT:GQ:DP        0|0:93:32       1|1:79:28       0|1:100:74
+20     2257625 rs6113720       T       C       .       PASS    AA=C;DP=130     GT:GQ:DP        0|0:93:32       1|1:85:31       0|1:100:67
+11     60851944        rs7397033       C       T       .       PASS    AA=T;DP=151     GT:GQ:DP        0|0:93:32       1|1:88:31       0|1:100:89
+19     53621603        rs28398354      T       C       .       PASS    AA=C;DP=89      GT:GQ:DP        0|0:93:33       1|1:25:11       0|1:100:37
+12     76830819        .       T       A       .       PASS    AA=T;DP=126     GT:GQ:DP        0|0:93:33       1|1:30:27       0|1:100:70
+5      77166926        .       G       A       .       PASS    AA=A;DP=104     GT:GQ:DP        0|0:93:33       1|1:31:12       0|1:100:58
+7      125145076       .       A       T       .       PASS    AA=T;DP=151     GT:GQ:DP        0|0:93:33       1|1:55:20       0|1:100:52
+7      107946791       rs40883 A       G       .       PASS    AA=G;DP=107     GT:GQ:DP        0|0:93:33       1|1:55:21       0|1:100:54
+14     87844293        rs11627082      T       A       .       PASS    AA=A;DP=135     GT:GQ:DP        0|0:93:33       1|1:70:26       0|1:100:73
+12     91212313        rs424113        C       T       .       PASS    AA=C;DP=98      GT:GQ:DP        0|0:93:34       0|1:100:22      0|0:100:36
+18     9179259 .       A       G       .       PASS    AA=A;DP=140     GT:GQ:DP        0|0:93:34       0|1:100:23      0|0:100:84
+2      122157584       .       A       T       .       PASS    AA=A;DP=102     GT:GQ:DP        0|0:93:35       1|0:96:16       0|1:100:41
+21     16846005        rs2823873       A       G       .       PASS    AA=A;DP=143     GT:GQ:DP        0|0:93:37       0|1:100:28      0|0:100:77
+2      42074824        .       T       G       .       PASS    AA=T;DP=168     GT:GQ:DP        0|0:93:37       1|1:48:29       0|1:100:95
+3      55009300        rs17054674      A       C       .       PASS    AA=A;DP=143     GT:GQ:DP        0|0:93:38       1|0:100:31      0|1:100:75
+17     35030668        rs57074971      A       G       .       PASS    AA=A;DP=143     GT:GQ:DP        0|0:93:43       1|0:100:20      0|1:100:43
+10     131023089       rs10829591      A       T       .       PASS    AA=T;DP=118     GT:GQ:DP        0|0:94:32       1|0:100:21      0|1:100:68
+16     19281433        .       C       T       .       PASS    AA=C;DP=121     GT:GQ:DP        0|0:94:32       1|0:96:16       0|1:100:75
+14     73030623        rs2302041       C       A       .       PASS    AA=C;DP=149     GT:GQ:DP        0|0:94:34       1|0:99:26       0|1:100:88
+2      40332552        rs389992        G       A       .       PASS    AA=G;DP=135     GT:GQ:DP        0|0:94:37       0|1:100:29      0|0:100:76
+19     56688204        rs4349265       A       G       .       PASS    AA=.;DP=160     GT:GQ:DP        0|0:94:37       1|0:100:21      0|1:100:100
+10     2337733 rs1570948       T       C       .       PASS    AA=T;DP=145     GT:GQ:DP        0|0:94:37       1|0:100:29      0|1:100:82
+5      114821485       rs9791007       G       A       .       PASS    AA=A;DP=127     GT:GQ:DP        0|0:94:37       1|0:67:18       0|1:100:68
+1      199591575       rs12141661      C       T       .       PASS    AA=C;DP=144;HM2 GT:GQ:DP        0|0:94:37       1|0:78:26       0|1:100:82
+3      172114939       rs9758459       G       T       .       PASS    AA=G;DP=115     GT:GQ:DP        0|0:94:40       0|1:100:24      0|0:100:50
+1      40118716        rs7533329       G       C       .       PASS    AA=C;DP=163;HM2;HM3     GT:GQ:DP        0|0:94:51       0|1:100:28      0|0:100:41
+11     69246102        rs10908200      G       A       .       PASS    AA=G;DP=138     GT:GQ:DP        0|0:95:30       0|1:100:14      0|0:100:50
+8      108655946       .       C       A       .       PASS    AA=c;DP=103     GT:GQ:DP        0|0:95:30       0|1:100:14      0|0:100:56
+2      220313066       rs10755038      C       T       .       PASS    AA=T;DP=107     GT:GQ:DP        0|0:95:30       0|1:100:15      0|0:100:61
+2      54313391        .       G       A       .       PASS    AA=G;DP=109     GT:GQ:DP        0|0:95:30       0|1:100:15      0|0:100:64
+10     3447689 .       C       T       .       PASS    AA=c;DP=108     GT:GQ:DP        0|0:95:30       0|1:100:16      0|0:100:62
+16     88125093        .       C       T       .       PASS    AA=C;DP=137     GT:GQ:DP        0|0:95:30       0|1:100:16      0|0:100:75
+8      116948570       rs10089163      G       T       .       PASS    AA=G;DP=135     GT:GQ:DP        0|0:95:30       0|1:100:16      0|0:100:85
+14     21623500        rs8011371       T       C       .       PASS    AA=T;DP=128     GT:GQ:DP        0|0:95:30       0|1:100:17      0|0:100:39
+13     55341269        rs2645930       G       C       .       PASS    AA=G;DP=123     GT:GQ:DP        0|0:95:30       0|1:100:17      0|0:100:78
+20     48359779        rs6095869       G       A       .       PASS    AA=G;DP=135     GT:GQ:DP        0|0:95:30       0|1:100:17      0|0:100:85
+2      35045939        rs55864621      A       G       .       PASS    AA=a;DP=108     GT:GQ:DP        0|0:95:30       0|1:100:18      0|0:100:59
+5      40632986        rs10060950      C       T       .       PASS    AA=C;DP=109     GT:GQ:DP        0|0:95:30       0|1:100:18      0|0:100:63
+4      165292210       rs4428243       C       G       .       PASS    AA=c;DP=122     GT:GQ:DP        0|0:95:30       0|1:100:18      0|0:100:75
+5      149978557       .       A       G       .       PASS    AA=A;DP=131     GT:GQ:DP        0|0:95:30       0|1:100:18      0|0:100:85
+14     91823565        rs4900107       C       A       .       PASS    AA=c;DP=128     GT:GQ:DP        0|0:95:30       0|1:100:18      0|0:96:40
+3      106852769       .       T       C       .       PASS    AA=T;DP=126     GT:GQ:DP        0|0:95:30       0|1:100:19      0|0:100:36
+22     45921947        rs59556299      A       G       .       PASS    AA=A;DP=152     GT:GQ:DP        0|0:95:30       0|1:100:19      0|0:100:50
+3      81047208        .       A       G       .       PASS    AA=A;DP=105     GT:GQ:DP        0|0:95:30       0|1:100:19      0|0:100:56
+10     22498155        .       A       G       .       PASS    AA=A;DP=117     GT:GQ:DP        0|0:95:30       0|1:100:19      0|0:100:69
+11     111320973       .       G       A       .       PASS    AA=G;DP=123     GT:GQ:DP        0|0:95:30       0|1:100:19      0|0:100:73
+4      88485555        rs62305732      C       G       .       PASS    AA=C;DP=129     GT:GQ:DP        0|0:95:30       0|1:100:19      0|0:100:79
+22     27932652        .       A       G       .       PASS    AA=A;DP=137     GT:GQ:DP        0|0:95:30       0|1:100:19      0|0:100:92
+6      143125671       rs197459        A       G       .       PASS    AA=a;DP=113     GT:GQ:DP        0|0:95:30       0|1:100:20      0|0:100:44
+3      33068633        .       C       T       .       PASS    AA=C;DP=145     GT:GQ:DP        0|0:95:30       0|1:100:20      0|0:100:45
+10     23682126        rs4748870       A       G       .       PASS    AA=A;DP=103     GT:GQ:DP        0|0:95:30       0|1:100:20      0|0:100:55
+7      18445299        rs10227917      C       T       .       PASS    AA=C;DP=105     GT:GQ:DP        0|0:95:30       0|1:100:20      0|0:100:55
+5      143939504       rs1153072       A       G       .       PASS    AA=a;DP=153     GT:GQ:DP        0|0:95:30       0|1:100:20      0|0:100:61
+9      77324594        rs7045118       C       G       .       PASS    AA=C;DP=117     GT:GQ:DP        0|0:95:30       0|1:100:20      0|0:100:67
+1      18298570        rs11261023      C       T       .       PASS    AA=c;DP=119;HM2;HM3     GT:GQ:DP        0|0:95:30       0|1:100:20      0|0:100:70
+10     124273635       .       C       A       .       PASS    AA=T;DP=120     GT:GQ:DP        0|0:95:30       0|1:100:20      0|0:100:70
+2      39307504        .       T       C       .       PASS    AA=T;DP=120     GT:GQ:DP        0|0:95:30       0|1:100:20      0|0:100:71
+17     47983036        rs349986        G       A       .       PASS    AA=G;DP=117     GT:GQ:DP        0|0:95:30       0|1:100:20      0|0:100:72
+7      10145477        rs6977200       C       T       .       PASS    AA=C;DP=124     GT:GQ:DP        0|0:95:30       0|1:100:20      0|0:100:73
+8      99475156        .       C       T       .       PASS    AA=C;DP=121     GT:GQ:DP        0|0:95:30       0|1:100:20      0|0:100:73
+1      164528652       rs10918420      C       T       .       PASS    AA=C;DP=125;HM2 GT:GQ:DP        0|0:95:30       0|1:100:20      0|0:100:75
+9      87119267        rs2769607       C       G       .       PASS    AA=C;DP=94      GT:GQ:DP        0|0:95:30       0|1:100:21      0|0:100:44
+2      44027520        rs62135064      G       A       .       PASS    AA=G;DP=100     GT:GQ:DP        0|0:95:30       0|1:100:21      0|0:100:50
+1      66295163        .       C       T       .       PASS    AA=C;DP=109     GT:GQ:DP        0|0:95:30       0|1:100:21      0|0:100:59
+6      130511886       rs1932107       A       T       .       PASS    AA=A;DP=119     GT:GQ:DP        0|0:95:30       0|1:100:21      0|0:100:70
+10     52920704        rs10823078      C       T       .       PASS    AA=T;DP=133     GT:GQ:DP        0|0:95:30       0|1:100:22      0|0:100:35
+9      36394189        rs9408268       T       C       .       PASS    AA=T;DP=136     GT:GQ:DP        0|0:95:30       0|1:100:22      0|0:100:40
+6      63625126        .       C       T       .       PASS    AA=-;DP=96      GT:GQ:DP        0|0:95:30       0|1:100:22      0|0:100:44
+5      117565251       .       A       G       .       PASS    AA=A;DP=102     GT:GQ:DP        0|0:95:30       0|1:100:22      0|0:100:52
+14     67058365        rs4899206       A       G       .       PASS    AA=G;DP=115     GT:GQ:DP        0|0:95:30       0|1:100:22      0|0:100:65
+1      236694474       rs1361663       A       G       .       PASS    AA=a;DP=122;HM2 GT:GQ:DP        0|0:95:30       0|1:100:22      0|0:100:67
+19     13509830        .       C       T       .       PASS    AA=T;DP=139     GT:GQ:DP        0|0:95:30       0|1:100:22      0|0:100:78
+2      57373107        .       A       G       .       PASS    AA=A;DP=133     GT:GQ:DP        0|0:95:30       0|1:100:22      0|0:100:80
+14     28482587        rs10149818      G       A       .       PASS    AA=G;DP=133     GT:GQ:DP        0|0:95:30       0|1:100:22      0|0:100:82
+18     12376771        rs11661708      A       G       .       PASS    AA=A;DP=102     GT:GQ:DP        0|0:95:30       0|1:100:23      0|0:100:46
+2      69211567        rs11885845      A       T       .       PASS    AA=A;DP=165     GT:GQ:DP        0|0:95:30       0|1:100:23      0|0:100:56
+4      156744242       rs4691789       C       G       .       PASS    AA=G;DP=112     GT:GQ:DP        0|0:95:30       0|1:100:23      0|0:100:59
+8      55109181        rs7823234       G       A       .       PASS    AA=g;DP=134     GT:GQ:DP        0|0:95:30       0|1:100:23      0|0:100:78
+17     32494357        .       G       A       .       PASS    AA=G;DP=131     GT:GQ:DP        0|0:95:30       0|1:100:23      0|0:100:80
+3      38840076        .       C       T       .       PASS    AA=C;DP=149     GT:GQ:DP        0|0:95:30       0|1:100:24      0|0:100:56
+11     28811793        .       G       A       .       PASS    AA=g;DP=111     GT:GQ:DP        0|0:95:30       0|1:100:24      0|0:100:58
+9      4137378 rs55720596      C       T       .       PASS    AA=C;DP=113     GT:GQ:DP        0|0:95:30       0|1:100:24      0|0:100:61
+4      6632944 rs7693600       A       G       .       PASS    AA=G;DP=131     GT:GQ:DP        0|0:95:30       0|1:100:24      0|0:100:71
+6      43601032        .       C       T       .       PASS    AA=C;DP=122     GT:GQ:DP        0|0:95:30       0|1:100:24      0|0:100:71
+3      21976039        .       A       G       .       PASS    AA=A;DP=134     GT:GQ:DP        0|0:95:30       0|1:100:24      0|0:100:81
+7      13038040        .       C       T       .       PASS    AA=C;DP=109     GT:GQ:DP        0|0:95:30       0|1:100:25      0|0:100:53
+8      106439750       .       G       T       .       PASS    AA=G;DP=119     GT:GQ:DP        0|0:95:30       0|1:100:25      0|0:100:64
+2      138667227       .       C       T       .       PASS    AA=C;DP=131     GT:GQ:DP        0|0:95:30       0|1:100:25      0|0:100:65
+10     64276393        rs7088601       C       T       .       PASS    AA=T;DP=127     GT:GQ:DP        0|0:95:30       0|1:100:25      0|0:100:74
+14     70411888        rs12586315      T       C       .       PASS    AA=T;DP=130     GT:GQ:DP        0|0:95:30       0|1:100:25      0|0:100:76
+13     101870867       .       T       C       .       PASS    AA=T;DP=133     GT:GQ:DP        0|0:95:30       0|1:100:25      0|0:100:78
+16     79643491        rs61495305      T       C       .       PASS    AA=T;DP=135     GT:GQ:DP        0|0:95:30       0|1:100:25      0|0:100:79
+1      173308196       rs12059398      A       T       .       PASS    AA=A;DP=136     GT:GQ:DP        0|0:95:30       0|1:100:25      0|0:100:80
+3      131679510       rs819093        A       G       .       PASS    AA=A;DP=143     GT:GQ:DP        0|0:95:30       0|1:100:26      0|0:100:47
+11     132783323       .       G       A       .       PASS    AA=A;DP=148     GT:GQ:DP        0|0:95:30       0|1:100:26      0|0:100:49
+9      15072688        .       T       C       .       PASS    AA=T;DP=108     GT:GQ:DP        0|0:95:30       0|1:100:26      0|0:100:53
+2      13220277        rs13419139      C       A       .       PASS    AA=C;DP=123     GT:GQ:DP        0|0:95:30       0|1:100:26      0|0:100:67
+7      95548499        .       A       G       .       PASS    AA=A;DP=96      GT:GQ:DP        0|0:95:30       0|1:100:27      0|0:100:42
+4      28915115        .       T       A       .       PASS    AA=T;DP=128     GT:GQ:DP        0|0:95:30       0|1:100:27      0|0:100:71
+6      44465291        rs11571906      T       C       .       PASS    AA=t;DP=135     GT:GQ:DP        0|0:95:30       0|1:100:27      0|0:100:78
+8      71401846        rs16936921      A       G       .       PASS    AA=A;DP=143     GT:GQ:DP        0|0:95:30       0|1:100:27      0|0:100:83
+10     76006666        .       A       G       .       PASS    AA=G;DP=134     GT:GQ:DP        0|0:95:30       0|1:100:27      0|0:99:33
+9      103659182       .       A       G       .       PASS    AA=A;DP=102     GT:GQ:DP        0|0:95:30       0|1:100:27      0|0:99:33
+4      175724264       .       A       G       .       PASS    AA=A;DP=131     GT:GQ:DP        0|0:95:30       0|1:100:28      0|0:100:72
+6      4451036 .       C       T       .       PASS    AA=C;DP=131     GT:GQ:DP        0|0:95:30       0|1:100:28      0|0:100:73
+3      5421818 .       C       G       .       PASS    AA=C;DP=134     GT:GQ:DP        0|0:95:30       0|1:100:28      0|0:100:74
+7      143318515       rs28578456      A       T       .       PASS    AA=A;DP=126     GT:GQ:DP        0|0:95:30       0|1:100:28      0|0:60:21
+14     50168619        .       A       G       .       PASS    AA=A;DP=108     GT:GQ:DP        0|0:95:30       0|1:100:29      0|0:100:49
+8      123093884       rs59995438      T       C       .       PASS    AA=T;DP=119     GT:GQ:DP        0|0:95:30       0|1:100:29      0|0:100:61
+8      120885191       rs4871629       A       G       .       PASS    AA=G;DP=124     GT:GQ:DP        0|0:95:30       0|1:100:29      0|0:100:65
+20     35008663        .       C       T       .       PASS    AA=C;DP=127     GT:GQ:DP        0|0:95:30       0|1:100:29      0|0:100:71
+18     64294031        .       C       T       .       PASS    AA=C;DP=134     GT:GQ:DP        0|0:95:30       0|1:100:29      0|0:100:73
+10     36519745        rs12268445      A       G       .       PASS    AA=A;DP=142     GT:GQ:DP        0|0:95:30       0|1:100:30      0|0:100:39
+7      32941954        .       G       C       .       PASS    AA=g;DP=130     GT:GQ:DP        0|0:95:30       0|1:100:30      0|0:100:71
+2      168447664       rs7566245       A       C       .       PASS    AA=A;DP=131     GT:GQ:DP        0|0:95:30       0|1:100:30      0|0:100:76
+6      89266995        .       T       C       .       PASS    AA=T;DP=149     GT:GQ:DP        0|0:95:30       0|1:100:30      0|0:100:89
+11     96565521        .       A       G       .       PASS    AA=G;DP=117     GT:GQ:DP        0|0:95:30       0|1:100:31      0|0:100:58
+16     77310175        .       A       G       .       PASS    AA=A;DP=125     GT:GQ:DP        0|0:95:30       0|1:100:31      0|0:100:68
+10     122723012       .       A       C       .       PASS    AA=C;DP=136     GT:GQ:DP        0|0:95:30       0|1:100:31      0|0:100:72
+14     58395384        .       C       T       .       PASS    AA=C;DP=151     GT:GQ:DP        0|0:95:30       0|1:100:32      0|0:100:43
+16     68192258        rs12596823      A       C       .       PASS    AA=A;DP=145     GT:GQ:DP        0|0:95:30       0|1:100:34      0|0:100:76
+15     49087597        rs11070829      T       C       .       PASS    AA=C;DP=145     GT:GQ:DP        0|0:95:30       0|1:100:35      0|0:100:80
+6      143196292       .       A       C       .       PASS    AA=A;DP=145     GT:GQ:DP        0|0:95:30       0|1:100:36      0|0:100:81
+13     63705935        rs9564149       G       A       .       PASS    AA=A;DP=90      GT:GQ:DP        0|0:95:30       0|1:100:9       0|0:100:52
+12     127493785       .       G       A       .       PASS    AA=G;DP=115     GT:GQ:DP        0|0:95:30       0|1:100:9       0|0:100:78
+1      112417212       .       A       G       .       PASS    AA=A;DP=92      GT:GQ:DP        0|0:95:31       0|1:100:12      0|0:100:48
+1      26830153        rs60243861      C       T       .       PASS    AA=C;DP=101     GT:GQ:DP        0|0:95:31       0|1:100:12      0|0:100:61
+2      37505142        .       C       T       .       PASS    AA=C;DP=136     GT:GQ:DP        0|0:95:31       0|1:100:18      0|0:100:85
+7      25428105        rs56274000      A       T       .       PASS    AA=A;DP=119     GT:GQ:DP        0|0:95:31       0|1:100:19      0|0:100:67
+6      104886595       rs274441        G       A       .       PASS    AA=G;DP=117     GT:GQ:DP        0|0:95:31       0|1:100:19      0|0:100:68
+6      80952034        .       T       G       .       PASS    AA=T;DP=128     GT:GQ:DP        0|0:95:31       0|1:100:19      0|0:100:73
+10     17558210        rs7069823       A       G       .       PASS    AA=G;DP=129     GT:GQ:DP        0|0:95:31       0|1:100:19      0|0:100:76
+6      46065579        rs3777605       G       A       .       PASS    AA=G;DP=133     GT:GQ:DP        0|0:95:31       0|1:100:19      0|0:100:83
+12     33594450        .       T       A       .       PASS    AA=T;DP=119     GT:GQ:DP        0|0:95:31       0|1:100:20      0|0:100:69
+14     52555765        rs17126054      T       A       .       PASS    AA=T;DP=123     GT:GQ:DP        0|0:95:31       0|1:100:20      0|0:100:75
+14     23298182        .       C       T       .       PASS    AA=c;DP=133     GT:GQ:DP        0|0:95:31       0|1:100:20      0|0:100:79
+11     73308399        .       C       A       .       PASS    AA=C;DP=137     GT:GQ:DP        0|0:95:31       0|1:100:20      0|0:100:81
+5      123532069       .       T       A       .       PASS    AA=T;DP=115     GT:GQ:DP        0|0:95:31       0|1:100:21      0|0:100:63
+3      125457991       rs34266187      G       A       .       PASS    AA=G;DP=124     GT:GQ:DP        0|0:95:31       0|1:100:21      0|0:100:72
+12     5071062 rs12300988      C       G       .       PASS    AA=C;DP=135     GT:GQ:DP        0|0:95:31       0|1:100:21      0|0:100:84
+9      88718454        .       G       C       .       PASS    AA=C;DP=116     GT:GQ:DP        0|0:95:31       0|1:100:22      0|0:100:65
+5      26638662        .       C       T       .       PASS    AA=C;DP=121     GT:GQ:DP        0|0:95:31       0|1:100:22      0|0:100:68
+9      70389910        .       C       T       .       PASS    AA=C;DP=109     GT:GQ:DP        0|0:95:31       0|1:100:23      0|0:100:56
+17     28879959        rs16968494      C       G       .       PASS    AA=C;DP=130     GT:GQ:DP        0|0:95:31       0|1:100:23      0|0:100:76
+10     66896792        .       T       G       .       PASS    AA=G;DP=110     GT:GQ:DP        0|0:95:31       0|1:100:24      0|0:100:45
+5      65128283        .       G       A       .       PASS    AA=G;DP=121     GT:GQ:DP        0|0:95:31       0|1:100:24      0|0:100:66
+6      67796027        .       C       A       .       PASS    AA=C;DP=122     GT:GQ:DP        0|0:95:31       0|1:100:24      0|0:100:67
+4      17538593        rs9968481       A       G       .       PASS    AA=G;DP=134     GT:GQ:DP        0|0:95:31       0|1:100:24      0|0:100:83
+9      98102566        rs10820289      A       C       .       PASS    AA=A;DP=104     GT:GQ:DP        0|0:95:31       0|1:100:25      0|0:100:51
+9      17690375        rs6475164       G       T       .       PASS    AA=G;DP=128     GT:GQ:DP        0|0:95:31       0|1:100:25      0|0:100:70
+5      117416984       rs17143506      A       T       .       PASS    AA=A;DP=144     GT:GQ:DP        0|0:95:31       0|1:100:25      0|0:100:88
+10     92828335        .       G       A       .       PASS    AA=G;DP=159     GT:GQ:DP        0|0:95:31       0|1:100:26      0|0:100:52
+15     52655750        rs12914472      C       A       .       PASS    AA=C;DP=158     GT:GQ:DP        0|0:95:31       0|1:100:26      0|0:100:95
+13     45592430        rs9526149       A       T       .       PASS    AA=A;DP=117     GT:GQ:DP        0|0:95:31       0|1:100:27      0|0:100:58
+7      50207010        rs1379183       A       C       .       PASS    AA=A;DP=150     GT:GQ:DP        0|0:95:31       0|1:100:27      0|0:100:75
+9      7533304 rs12348981      A       G       .       PASS    AA=A;DP=144     GT:GQ:DP        0|0:95:31       0|1:100:27      0|0:100:87
+8      62233265        rs6997461       G       A       .       PASS    AA=G;DP=138     GT:GQ:DP        0|0:95:31       0|1:100:28      0|0:100:76
+2      239227688       .       G       A       .       PASS    AA=G;DP=139     GT:GQ:DP        0|0:95:31       0|1:100:28      0|0:100:84
+16     8765250 rs11641035      A       G       .       PASS    AA=A;DP=139     GT:GQ:DP        0|0:95:31       0|1:100:29      0|0:100:39
+18     53267785        .       T       C       .       PASS    AA=T;DP=129     GT:GQ:DP        0|0:95:31       0|1:100:29      0|0:100:69
+4      143905069       .       T       C       .       PASS    AA=T;DP=135     GT:GQ:DP        0|0:95:31       0|1:100:29      0|0:100:76
+3      124265245       .       T       A       .       PASS    AA=T;DP=138     GT:GQ:DP        0|0:95:31       0|1:100:30      0|0:100:76
+9      106667143       .       A       G       .       PASS    AA=G;DP=138     GT:GQ:DP        0|0:95:31       0|1:100:30      0|0:100:79
+2      29178775        rs6738818       T       C       .       PASS    AA=C;DP=150     GT:GQ:DP        0|0:95:31       0|1:100:30      0|0:100:86
+10     82190581        .       C       G       .       PASS    AA=T;DP=122     GT:GQ:DP        0|0:95:31       0|1:100:31      0|0:100:61
+6      40155132        .       A       T       .       PASS    AA=A;DP=151     GT:GQ:DP        0|0:95:31       0|1:100:33      0|0:100:88
+2      8042659 .       G       C       .       PASS    AA=G;DP=154     GT:GQ:DP        0|0:95:31       0|1:100:36      0|0:100:88
+1      149142591       rs486836        A       T       .       PASS    AA=a;DP=90;HM2  GT:GQ:DP        0|0:95:31       1|0:100:12      0|1:100:36
+15     25974473        .       C       T       .       PASS    AA=C;DP=90      GT:GQ:DP        0|0:95:31       1|0:100:14      0|1:100:37
+11     45064179        rs4755956       C       T       .       PASS    AA=c;DP=117     GT:GQ:DP        0|0:95:31       1|0:100:14      0|1:100:72
+7      9236496 rs10250521      A       T       .       PASS    AA=T;DP=94      GT:GQ:DP        0|0:95:31       1|0:100:16      0|1:100:33
+9      98157011        .       A       T       .       PASS    AA=A;DP=117     GT:GQ:DP        0|0:95:31       1|0:100:16      0|1:100:70
+15     97824175        rs10902546      C       T       .       PASS    AA=C;DP=99      GT:GQ:DP        0|0:95:31       1|0:100:17      0|1:100:54
+3      81938008        rs6790574       A       G       .       PASS    AA=A;DP=106     GT:GQ:DP        0|0:95:31       1|0:100:17      0|1:100:56
+2      18869921        .       G       T       .       PASS    AA=G;DP=113     GT:GQ:DP        0|0:95:31       1|0:100:17      0|1:100:62
+9      95102283        .       C       T       .       PASS    AA=C;DP=106     GT:GQ:DP        0|0:95:31       1|0:100:17      0|1:100:63
+2      6833499 .       G       A       .       PASS    AA=G;DP=114     GT:GQ:DP        0|0:95:31       1|0:100:17      0|1:100:65
+14     89855464        rs11845372      A       T       .       PASS    AA=A;DP=115     GT:GQ:DP        0|0:95:31       1|0:100:17      0|1:100:66
+6      45918784        rs9463132       A       G       .       PASS    AA=A;DP=137     GT:GQ:DP        0|0:95:31       1|0:100:17      0|1:100:92
+2      160813129       .       C       T       .       PASS    AA=C;DP=95      GT:GQ:DP        0|0:95:31       1|0:100:18      0|1:100:36
+14     94254023        rs10137977      T       C       .       PASS    AA=T;DP=101     GT:GQ:DP        0|0:95:31       1|0:100:18      0|1:100:37
+18     4595387 rs56973977      A       G       .       PASS    AA=A;DP=107     GT:GQ:DP        0|0:95:31       1|0:100:18      0|1:100:59
+16     8441920 rs8057465       A       G       .       PASS    AA=A;DP=110     GT:GQ:DP        0|0:95:31       1|0:100:18      0|1:100:63
+2      135937790       .       C       T       .       PASS    AA=C;DP=118     GT:GQ:DP        0|0:95:31       1|0:100:18      0|1:100:71
+6      77466002        rs60505508      T       C       .       PASS    AA=T;DP=140     GT:GQ:DP        0|0:95:31       1|0:100:18      0|1:100:92
+7      115751707       .       A       T       .       PASS    AA=A;DP=135     GT:GQ:DP        0|0:95:31       1|0:100:19      0|1:100:40
+5      115824361       rs187710        G       A       .       PASS    AA=A;DP=109     GT:GQ:DP        0|0:95:31       1|0:100:19      0|1:100:46
+7      83980254        .       A       G       .       PASS    AA=A;DP=100     GT:GQ:DP        0|0:95:31       1|0:100:19      0|1:100:49
+6      49233623        .       A       G       .       PASS    AA=A;DP=102     GT:GQ:DP        0|0:95:31       1|0:100:19      0|1:100:51
+8      11852210        rs59381967      T       C       .       PASS    AA=T;DP=113     GT:GQ:DP        0|0:95:31       1|0:100:19      0|1:100:64
+12     55480337        rs7311381       G       A       .       PASS    AA=g;DP=118     GT:GQ:DP        0|0:95:31       1|0:100:19      0|1:100:68
+9      134746793       .       G       T       .       PASS    AA=G;DP=125     GT:GQ:DP        0|0:95:31       1|0:100:19      0|1:100:76
+5      11906494        .       C       A       .       PASS    AA=c;DP=128     GT:GQ:DP        0|0:95:31       1|0:100:19      0|1:100:77
+1      235694596       rs12063070      C       T       .       PASS    AA=C;DP=107;HM2;HM3     GT:GQ:DP        0|0:95:31       1|0:100:20      0|1:100:40
+2      209809035       rs4673455       G       A       .       PASS    AA=G;DP=96      GT:GQ:DP        0|0:95:31       1|0:100:20      0|1:100:46
+3      67439840        rs12493000      C       G       .       PASS    AA=G;DP=112     GT:GQ:DP        0|0:95:31       1|0:100:20      0|1:100:58
+1      18601168        rs7512723       C       T       .       PASS    AA=C;DP=114;HM2;HM3     GT:GQ:DP        0|0:95:31       1|0:100:20      0|1:100:64
+4      89655166        rs58992350      C       T       .       PASS    AA=.;DP=143     GT:GQ:DP        0|0:95:31       1|0:100:21      0|1:100:40
+8      41456015        .       C       T       .       PASS    AA=c;DP=110     GT:GQ:DP        0|0:95:31       1|0:100:21      0|1:100:49
+4      42551932        rs1993060       G       A       .       PASS    AA=G;DP=115     GT:GQ:DP        0|0:95:31       1|0:100:21      0|1:100:63
+9      1405439 .       T       G       .       PASS    AA=T;DP=118     GT:GQ:DP        0|0:95:31       1|0:100:21      0|1:100:65
+20     51236111        rs6097288       G       A       .       PASS    AA=G;DP=126     GT:GQ:DP        0|0:95:31       1|0:100:21      0|1:100:74
+8      107782056       .       G       A       .       PASS    AA=G;DP=107     GT:GQ:DP        0|0:95:31       1|0:100:22      0|1:100:52
+7      15785519        .       A       G       .       PASS    AA=A;DP=104     GT:GQ:DP        0|0:95:31       1|0:100:22      0|1:100:54
+16     8630233 rs34078995      T       C       .       PASS    AA=t;DP=123     GT:GQ:DP        0|0:95:31       1|0:100:22      0|1:100:66
+2      231638793       .       C       T       .       PASS    AA=C;DP=124     GT:GQ:DP        0|0:95:31       1|0:100:22      0|1:100:71
+8      26379684        rs2241910       C       G       .       PASS    AA=C;DP=136     GT:GQ:DP        0|0:95:31       1|0:100:22      0|1:100:83
+20     50720053        rs60489181      T       C       .       PASS    AA=C;DP=142     GT:GQ:DP        0|0:95:31       1|0:100:22      0|1:100:89
+3      155019235       .       A       T       .       PASS    AA=A;DP=135     GT:GQ:DP        0|0:95:31       1|0:100:23      0|1:100:40
+16     12887136        rs11647923      T       A       .       PASS    AA=T;DP=104     GT:GQ:DP        0|0:95:31       1|0:100:23      0|1:100:49
+20     1643847 .       C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        0|0:95:31       1|0:100:23      0|1:100:62
+5      125472967       rs12188921      A       G       .       PASS    AA=G;DP=117     GT:GQ:DP        0|0:95:31       1|0:100:23      0|1:100:62
+11     116737702       rs2305825       C       T       .       PASS    AA=C;DP=135     GT:GQ:DP        0|0:95:31       1|0:100:23      0|1:100:81
+15     70442948        rs962407        G       A       .       PASS    AA=A;DP=143     GT:GQ:DP        0|0:95:31       1|0:100:23      0|1:100:89
+8      2091674 .       G       C       .       PASS    AA=G;DP=113     GT:GQ:DP        0|0:95:31       1|0:100:24      0|1:100:55
+11     36305365        .       G       T       .       PASS    AA=G;DP=123     GT:GQ:DP        0|0:95:31       1|0:100:24      0|1:100:64
+17     60416289        .       A       T       .       PASS    AA=A;DP=124     GT:GQ:DP        0|0:95:31       1|0:100:24      0|1:100:69
+8      52139522        .       A       G       .       PASS    AA=A;DP=127     GT:GQ:DP        0|0:95:31       1|0:100:24      0|1:100:72
+16     7728232 .       T       G       .       PASS    AA=C;DP=145     GT:GQ:DP        0|0:95:31       1|0:100:25      0|1:100:39
+11     91828146        rs652365        A       C       .       PASS    AA=A;DP=124     GT:GQ:DP        0|0:95:31       1|0:100:25      0|1:100:71
+13     36586236        rs12583685      T       C       .       PASS    AA=T;DP=138     GT:GQ:DP        0|0:95:31       1|0:100:25      0|1:100:82
+7      111817752       rs2523029       G       A       .       PASS    AA=g;DP=138     GT:GQ:DP        0|0:95:31       1|0:100:25      0|1:100:82
+5      124226299       rs58853456      G       A       .       PASS    AA=g;DP=146     GT:GQ:DP        0|0:95:31       1|0:100:25      0|1:100:91
+7      61752352        rs8188526       G       A       .       PASS    AA=.;DP=112     GT:GQ:DP        0|0:95:31       1|0:100:26      0|1:100:55
+6      142690416       .       G       C       .       PASS    AA=G;DP=168     GT:GQ:DP        0|0:95:31       1|0:100:26      0|1:100:59
+11     115868504       rs11215964      T       G       .       PASS    AA=T;DP=129     GT:GQ:DP        0|0:95:31       1|0:100:26      0|1:100:71
+18     43975079        rs8096699       A       G       .       PASS    AA=G;DP=133     GT:GQ:DP        0|0:95:31       1|0:100:26      0|1:100:74
+17     9151937 rs8069648       A       G       .       PASS    AA=A;DP=149     GT:GQ:DP        0|0:95:31       1|0:100:26      0|1:100:92
+5      16328157        .       A       C       .       PASS    AA=A;DP=104     GT:GQ:DP        0|0:95:31       1|0:100:27      0|1:100:39
+3      100322594       rs2948601       C       T       .       PASS    AA=c;DP=150     GT:GQ:DP        0|0:95:31       1|0:100:27      0|1:100:49
+7      108630268       rs57342408      T       C       .       PASS    AA=T;DP=132     GT:GQ:DP        0|0:95:31       1|0:100:27      0|1:100:60
+1      94524200        .       G       A       .       PASS    AA=G;DP=125     GT:GQ:DP        0|0:95:31       1|0:100:27      0|1:100:66
+2      117768906       .       G       A       .       PASS    AA=G;DP=133     GT:GQ:DP        0|0:95:31       1|0:100:27      0|1:100:73
+10     60954350        rs2784798       T       C       .       PASS    AA=T;DP=134     GT:GQ:DP        0|0:95:31       1|0:100:27      0|1:100:78
+7      39703794        rs3779200       T       C       .       PASS    AA=T;DP=138     GT:GQ:DP        0|0:95:31       1|0:100:27      0|1:100:84
+12     126566806       rs7975048       G       C       .       PASS    AA=C;DP=147     GT:GQ:DP        0|0:95:31       1|0:100:27      0|1:100:88
+11     35251972        .       A       G       .       PASS    AA=A;DP=156     GT:GQ:DP        0|0:95:31       1|0:100:27      0|1:100:99
+10     8621455 .       A       T       .       PASS    AA=A;DP=153     GT:GQ:DP        0|0:95:31       1|0:100:28      0|1:100:46
+10     17279049        .       G       C       .       PASS    AA=G;DP=136     GT:GQ:DP        0|0:95:31       1|0:100:28      0|1:100:64
+7      27181566        rs6949451       C       T       .       PASS    AA=C;DP=125     GT:GQ:DP        0|0:95:31       1|0:100:28      0|1:100:66
+17     64988065        rs9907575       G       A       .       PASS    AA=G;DP=135     GT:GQ:DP        0|0:95:31       1|0:100:28      0|1:100:78
+3      182793342       .       C       T       .       PASS    AA=C;DP=139     GT:GQ:DP        0|0:95:31       1|0:100:28      0|1:100:79
+20     3887140 rs2253977       T       C       .       PASS    AA=T;DP=143     GT:GQ:DP        0|0:95:31       1|0:100:28      0|1:100:86
+6      166866697       rs16899084      A       G       .       PASS    AA=A;DP=158     GT:GQ:DP        0|0:95:31       1|0:100:29      0|1:100:44
+3      3423552 rs1581018       G       A       .       PASS    AA=a;DP=134     GT:GQ:DP        0|0:95:31       1|0:100:29      0|1:100:73
+1      233039175       rs822841        G       A       .       PASS    AA=A;DP=131;HM2 GT:GQ:DP        0|0:95:31       1|0:100:29      0|1:100:74
+7      9145071 rs28564460      A       G       .       PASS    AA=A;DP=142     GT:GQ:DP        0|0:95:31       1|0:100:29      0|1:100:80
+11     120597608       rs575030        T       C       .       PASS    AA=T;DP=149     GT:GQ:DP        0|0:95:31       1|0:100:29      0|1:100:87
+18     44613022        rs1319946       C       T       .       PASS    AA=.;DP=145     GT:GQ:DP        0|0:95:31       1|0:100:29      0|1:100:87
+6      170722552       rs61486120      G       T       .       PASS    AA=G;DP=141     GT:GQ:DP        0|0:95:31       1|0:100:30      0|1:100:37
+1      164282385       .       T       A       .       PASS    AA=T;DP=135     GT:GQ:DP        0|0:95:31       1|0:100:30      0|1:100:75
+1      166934613       rs10489360      G       A       .       PASS    AA=G;DP=143;HM2;HM3     GT:GQ:DP        0|0:95:31       1|0:100:30      0|1:100:79
+2      200096482       rs58783921      T       C       .       PASS    AA=T;DP=140     GT:GQ:DP        0|0:95:31       1|0:100:30      0|1:100:81
+2      81114769        rs2862432       C       T       .       PASS    AA=C;DP=157     GT:GQ:DP        0|0:95:31       1|0:100:30      0|1:100:96
+10     21451458        .       A       G       .       PASS    AA=A;DP=117     GT:GQ:DP        0|0:95:31       1|0:100:31      0|1:100:52
+2      138765850       rs4399769       C       T       .       PASS    AA=C;DP=140     GT:GQ:DP        0|0:95:31       1|0:100:31      0|1:100:79
+15     31927573        rs7172238       G       A       .       PASS    AA=G;DP=150     GT:GQ:DP        0|0:95:31       1|0:100:32      0|1:100:44
+3      106469425       rs9683082       C       A       .       PASS    AA=C;DP=120     GT:GQ:DP        0|0:95:31       1|0:100:32      0|1:100:60
+12     43673524        .       T       G       .       PASS    AA=T;DP=126     GT:GQ:DP        0|0:95:31       1|0:100:32      0|1:100:64
+5      129859109       rs58353696      A       C       .       PASS    AA=A;DP=96      GT:GQ:DP        0|0:95:31       1|0:100:32      0|1:65:23
+17     52587864        rs57466974      C       T       .       PASS    AA=C;DP=121     GT:GQ:DP        0|0:95:31       1|0:100:33      0|1:100:58
+13     108098559       rs4523811       A       T       .       PASS    AA=T;DP=141     GT:GQ:DP        0|0:95:31       1|0:100:33      0|1:100:81
+3      13956200        .       C       G       .       PASS    AA=C;DP=144     GT:GQ:DP        0|0:95:31       1|0:100:33      0|1:100:82
+11     75402787        .       C       T       .       PASS    AA=C;DP=109     GT:GQ:DP        0|0:95:31       1|0:100:34      0|1:100:44
+11     129530155       rs11221986      T       C       .       PASS    AA=C;DP=135     GT:GQ:DP        0|0:95:31       1|0:100:34      0|1:100:69
+19     5980210 .       C       T       .       PASS    AA=c;DP=141     GT:GQ:DP        0|0:95:31       1|0:100:34      0|1:100:78
+8      63176689        .       T       C       .       PASS    AA=T;DP=125     GT:GQ:DP        0|0:95:31       1|0:100:36      0|1:100:60
+20     51194459        rs58304085      C       T       .       PASS    AA=C;DP=145     GT:GQ:DP        0|0:95:31       1|0:100:39      0|1:100:76
+11     17041946        rs59729712      C       A       .       PASS    AA=C;DP=99      GT:GQ:DP        0|0:95:31       1|0:10:13       0|1:100:56
+19     40965374        rs2291067       G       A       .       PASS    AA=g;DP=111     GT:GQ:DP        0|0:95:31       1|0:19:10       0|1:100:70
+4      82208583        rs6817970       C       T       .       PASS    AA=C;DP=107     GT:GQ:DP        0|0:95:31       1|0:22:23       0|1:100:56
+1      11514438        .       C       A       .       PASS    AA=C;DP=123     GT:GQ:DP        0|0:95:31       1|0:31:9        0|1:100:84
+2      239147538       rs57402657      G       A       .       PASS    AA=A;DP=98      GT:GQ:DP        0|0:95:31       1|0:33:7        0|1:100:50
+2      30593342        .       C       T       .       PASS    AA=C;DP=114     GT:GQ:DP        0|0:95:31       1|0:35:14       0|1:100:69
+1      111144051       rs343820        G       C       .       PASS    AA=G;DP=106;HM2 GT:GQ:DP        0|0:95:31       1|0:46:16       0|1:100:61
+1      15532527        .       C       T       .       PASS    AA=c;DP=114     GT:GQ:DP        0|0:95:31       1|0:47:13       0|1:100:71
+21     14387681        .       G       C       .       PASS    AA=g;DP=101     GT:GQ:DP        0|0:95:31       1|0:48:14       0|1:100:42
+12     45093122        .       C       T       .       PASS    AA=T;DP=112     GT:GQ:DP        0|0:95:31       1|0:48:17       0|1:100:67
+5      131651590       rs28532117      C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        0|0:95:31       1|0:52:13       0|1:100:68
+7      80382975        rs12154611      A       G       .       PASS    AA=A;DP=99      GT:GQ:DP        0|0:95:31       1|0:58:16       0|1:100:52
+10     11471237        rs10752220      A       C       .       PASS    AA=A;DP=117     GT:GQ:DP        0|0:95:31       1|0:59:18       0|1:100:68
+9      133657741       rs10901097      C       T       .       PASS    AA=C;DP=143     GT:GQ:DP        0|0:95:31       1|0:60:12       0|1:100:56
+20     23473887        rs9973976       G       A       .       PASS    AA=G;DP=122     GT:GQ:DP        0|0:95:31       1|0:66:11       0|1:100:68
+2      241158495       rs11684114      G       A       .       PASS    AA=g;DP=101     GT:GQ:DP        0|0:95:31       1|0:66:12       0|1:100:48
+8      143330132       .       G       A       .       PASS    AA=G;DP=125     GT:GQ:DP        0|0:95:31       1|0:67:16       0|1:100:79
+8      135653498       rs6998749       G       A       .       PASS    AA=G;DP=134     GT:GQ:DP        0|0:95:31       1|0:70:31       0|1:100:73
+19     9152039 rs10402219      T       C       .       PASS    AA=C;DP=88      GT:GQ:DP        0|0:95:31       1|0:72:11       0|1:100:47
+22     22197242        rs9608156       C       T       .       PASS    AA=N;DP=111     GT:GQ:DP        0|0:95:31       1|0:72:15       0|1:100:65
+1      4576947 rs2411887       C       T       .       PASS    AA=C;DP=97;HM2;HM3      GT:GQ:DP        0|0:95:31       1|0:75:18       0|1:100:39
+10     13468234        .       G       A       .       PASS    AA=G;DP=111     GT:GQ:DP        0|0:95:31       1|0:76:18       0|1:100:62
+4      25706615        rs28711604      A       G       .       PASS    AA=A;DP=130     GT:GQ:DP        0|0:95:31       1|0:78:20       0|1:100:80
+13     32304193        rs7333216       C       T       .       PASS    AA=C;DP=112     GT:GQ:DP        0|0:95:31       1|0:79:22       0|1:100:58
+12     20429208        rs61911345      T       A       .       PASS    AA=T;DP=125     GT:GQ:DP        0|0:95:31       1|0:80:16       0|1:100:72
+10     42602502        .       T       C       .       PASS    AA=t;DP=108     GT:GQ:DP        0|0:95:31       1|0:81:17       0|1:100:58
+8      144638087       rs11786237      C       T       .       PASS    AA=C;DP=85      GT:GQ:DP        0|0:95:31       1|0:82:16       0|1:100:33
+5      23471262        .       T       C       .       PASS    AA=T;DP=122     GT:GQ:DP        0|0:95:31       1|0:88:25       0|1:100:69
+9      5356368 rs7024755       G       C       .       PASS    AA=C;DP=95      GT:GQ:DP        0|0:95:31       1|0:89:16       0|1:100:38
+7      1053809 rs1058729       C       T       .       PASS    AA=C;DP=170     GT:GQ:DP        0|0:95:31       1|0:92:28       0|1:100:66
+2      121026609       rs12617782      G       A       .       PASS    AA=G;DP=122     GT:GQ:DP        0|0:95:31       1|0:93:16       0|1:100:75
+4      27430890        rs16879832      A       G       .       PASS    AA=A;DP=96      GT:GQ:DP        0|0:95:31       1|0:94:16       0|1:100:50
+4      174413996       .       A       C       .       PASS    AA=A;DP=123     GT:GQ:DP        0|0:95:31       1|0:94:16       0|1:100:76
+9      4169936 rs2380942       G       A       .       PASS    AA=G;DP=94      GT:GQ:DP        0|0:95:31       1|0:94:18       0|1:100:45
+5      99640330        .       C       T       .       PASS    AA=C;DP=111     GT:GQ:DP        0|0:95:31       1|0:95:21       0|1:100:62
+4      18976037        .       A       C       .       PASS    AA=A;DP=106     GT:GQ:DP        0|0:95:31       1|0:96:16       0|1:100:57
+3      160148334       rs13071792      C       T       .       PASS    AA=N;DP=103     GT:GQ:DP        0|0:95:31       1|0:97:16       0|1:100:47
+20     23078228        rs755697        G       A       .       PASS    AA=G;DP=141     GT:GQ:DP        0|0:95:31       1|0:98:23       0|1:100:88
+11     119353586       .       C       T       .       PASS    AA=C;DP=118     GT:GQ:DP        0|0:95:32       0|1:100:16      0|0:100:70
+2      232999215       .       C       T       .       PASS    AA=-;DP=121     GT:GQ:DP        0|0:95:32       0|1:100:18      0|0:100:73
+1      178811202       rs9804047       G       A       .       PASS    AA=G;DP=100     GT:GQ:DP        0|0:95:32       0|1:100:20      0|0:100:49
+1      203034455       rs57166908      G       A       .       PASS    AA=G;DP=128     GT:GQ:DP        0|0:95:32       0|1:100:20      0|0:100:75
+5      54382673        rs7722473       T       C       .       PASS    AA=T;DP=133     GT:GQ:DP        0|0:95:32       0|1:100:23      0|0:100:37
+4      40165656        rs61384352      A       G       .       PASS    AA=A;DP=145     GT:GQ:DP        0|0:95:32       0|1:100:25      0|0:100:44
+5      160834408       rs4304105       C       T       .       PASS    AA=c;DP=146     GT:GQ:DP        0|0:95:32       0|1:100:27      0|0:80:35
+5      173100613       rs6895993       C       T       .       PASS    AA=C;DP=147     GT:GQ:DP        0|0:95:32       0|1:100:28      0|0:100:86
+6      21490067        rs16884912      T       C       .       PASS    AA=T;DP=138     GT:GQ:DP        0|0:95:32       0|1:100:30      0|0:100:77
+13     106276511       rs9587233       C       T       .       PASS    AA=C;DP=140     GT:GQ:DP        0|0:95:32       0|1:100:30      0|0:100:80
+1      67303539        rs6680264       C       T       .       PASS    AA=C;DP=154;HM2 GT:GQ:DP        0|0:95:32       0|1:100:36      0|0:100:88
+3      97312210        rs12496160      C       T       .       PASS    AA=c;DP=115     GT:GQ:DP        0|0:95:32       1|0:100:13      0|1:100:69
+7      900221  rs59131570      C       T       .       PASS    AA=c;DP=123     GT:GQ:DP        0|0:95:32       1|0:100:14      0|1:100:80
+1      19107503        rs9426800       A       G       .       PASS    AA=G;DP=118     GT:GQ:DP        0|0:95:32       1|0:100:15      0|1:100:65
+3      18644287        .       C       T       .       PASS    AA=C;DP=109     GT:GQ:DP        0|0:95:32       1|0:100:16      0|1:100:63
+17     12927760        rs7209255       C       G       .       PASS    AA=G;DP=108     GT:GQ:DP        0|0:95:32       1|0:100:17      0|1:100:59
+3      6718015 rs3886203       G       C       .       PASS    AA=C;DP=107     GT:GQ:DP        0|0:95:32       1|0:100:17      0|1:100:59
+3      105005718       .       T       C       .       PASS    AA=T;DP=116     GT:GQ:DP        0|0:95:32       1|0:100:17      0|1:100:67
+3      44099562        rs57305437      C       T       .       PASS    AA=C;DP=101     GT:GQ:DP        0|0:95:32       1|0:100:18      0|1:100:51
+1      151461325       .       T       G       .       PASS    AA=G;DP=133     GT:GQ:DP        0|0:95:32       1|0:100:18      0|1:100:80
+1      62464779        rs55901108      G       T       .       PASS    AA=G;DP=107     GT:GQ:DP        0|0:95:32       1|0:100:19      0|1:100:41
+11     11440581        .       A       T       .       PASS    AA=A;DP=99      GT:GQ:DP        0|0:95:32       1|0:100:21      0|1:100:36
+2      36801025        rs61495335      C       G       .       PASS    AA=C;DP=118     GT:GQ:DP        0|0:95:32       1|0:100:21      0|1:100:69
+15     56792953        .       G       A       .       PASS    AA=G;DP=132     GT:GQ:DP        0|0:95:32       1|0:100:21      0|1:100:76
+2      6865737 rs7593704       C       T       .       PASS    AA=C;DP=133     GT:GQ:DP        0|0:95:32       1|0:100:21      0|1:100:80
+18     28555089        .       C       A       .       PASS    AA=C;DP=114     GT:GQ:DP        0|0:95:32       1|0:100:22      0|1:100:57
+6      14872856        rs742038        C       G       .       PASS    AA=c;DP=124     GT:GQ:DP        0|0:95:32       1|0:100:22      0|1:100:70
+3      57000153        rs58867172      T       C       .       PASS    AA=T;DP=134     GT:GQ:DP        0|0:95:32       1|0:100:22      0|1:100:79
+16     73265035        rs13335071      A       C       .       PASS    AA=A;DP=136     GT:GQ:DP        0|0:95:32       1|0:100:22      0|1:100:83
+21     22454898        .       C       A       .       PASS    AA=C;DP=105     GT:GQ:DP        0|0:95:32       1|0:100:23      0|1:100:51
+18     41575026        rs11082468      A       G       .       PASS    AA=G;DP=121     GT:GQ:DP        0|0:95:32       1|0:100:23      0|1:100:68
+17     53324042        rs28450483      C       T       .       PASS    AA=C;DP=131     GT:GQ:DP        0|0:95:32       1|0:100:23      0|1:100:75
+13     49659620        rs2740516       G       A       .       PASS    AA=G;DP=133     GT:GQ:DP        0|0:95:32       1|0:100:23      0|1:100:77
+3      169705826       rs7642311       A       G       .       PASS    AA=A;DP=137     GT:GQ:DP        0|0:95:32       1|0:100:23      0|1:100:82
+9      9900993 rs10978080      T       C       .       PASS    AA=T;DP=139     GT:GQ:DP        0|0:95:32       1|0:100:23      0|1:100:83
+17     46870382        rs12937851      C       G       .       PASS    AA=C;DP=118     GT:GQ:DP        0|0:95:32       1|0:100:24      0|1:100:63
+4      101940747       .       T       C       .       PASS    AA=t;DP=134     GT:GQ:DP        0|0:95:32       1|0:100:24      0|1:100:74
+18     45781130        .       G       C       .       PASS    AA=G;DP=132     GT:GQ:DP        0|0:95:32       1|0:100:24      0|1:100:77
+13     42116191        .       C       T       .       PASS    AA=C;DP=140     GT:GQ:DP        0|0:95:32       1|0:100:24      0|1:100:84
+3      183661480       .       A       G       .       PASS    AA=A;DP=135     GT:GQ:DP        0|0:95:32       1|0:100:25      0|1:100:80
+7      134782554       rs2551770       A       T       .       PASS    AA=A;DP=134     GT:GQ:DP        0|0:95:32       1|0:100:26      0|1:100:40
+13     23185895        .       C       T       .       PASS    AA=C;DP=124     GT:GQ:DP        0|0:95:32       1|0:100:27      0|1:100:65
+7      135795493       rs1425159       A       T       .       PASS    AA=A;DP=122     GT:GQ:DP        0|0:95:32       1|0:100:27      0|1:100:65
+11     134442578       .       G       A       .       PASS    AA=G;DP=112     GT:GQ:DP        0|0:95:32       1|0:100:29      0|1:100:51
+1      243123330       rs59562663      A       G       .       PASS    AA=A;DP=144     GT:GQ:DP        0|0:95:32       1|0:100:29      0|1:100:82
+20     17671926        rs6105803       G       A       .       PASS    AA=g;DP=120     GT:GQ:DP        0|0:95:32       1|0:100:30      0|1:100:58
+8      28610566        .       C       T       .       PASS    AA=C;DP=156     GT:GQ:DP        0|0:95:32       1|0:100:31      0|1:100:51
+15     94007892        rs12440903      T       C       .       PASS    AA=T;DP=136     GT:GQ:DP        0|0:95:32       1|0:100:31      0|1:100:76
+12     63509511        .       G       C       .       PASS    AA=G;DP=128     GT:GQ:DP        0|0:95:32       1|0:100:32      0|1:100:67
+12     38653324        rs12827948      C       G       .       PASS    AA=G;DP=139     GT:GQ:DP        0|0:95:32       1|0:100:33      0|1:100:76
+12     125654608       .       T       G       .       PASS    AA=G;DP=148     GT:GQ:DP        0|0:95:32       1|0:100:34      0|1:100:82
+9      7597624 rs55918546      C       T       .       PASS    AA=C;DP=150     GT:GQ:DP        0|0:95:32       1|0:100:35      0|1:100:41
+1      213935694       rs4411108       A       G       .       PASS    AA=A;DP=151     GT:GQ:DP        0|0:95:32       1|0:100:35      0|1:100:43
+3      118763814       .       C       T       .       PASS    AA=C;DP=158     GT:GQ:DP        0|0:95:32       1|0:100:35      0|1:100:92
+18     4942515 rs1604285       G       A       .       PASS    AA=G;DP=99      GT:GQ:DP        0|0:95:32       1|0:13:15       0|1:100:53
+9      139012897       .       G       C       .       PASS    AA=C;DP=111     GT:GQ:DP        0|0:95:32       1|0:16:8        0|1:100:74
+14     35465207        rs58486440      C       T       .       PASS    AA=C;DP=92      GT:GQ:DP        0|0:95:32       1|0:22:18       0|1:100:29
+7      118986087       rs10279746      C       G       .       PASS    AA=c;DP=105     GT:GQ:DP        0|0:95:32       1|0:47:14       0|1:100:59
+15     80092396        .       G       A       .       PASS    AA=G;DP=117     GT:GQ:DP        0|0:95:32       1|0:50:9        0|1:100:75
+1      18806668        rs6703076       C       T       .       PASS    AA=C;DP=133;HM2;HM3     GT:GQ:DP        0|0:95:32       1|0:59:10       0|1:100:89
+17     34707354        rs56315211      G       A       .       PASS    AA=G;DP=145     GT:GQ:DP        0|0:95:32       1|0:66:28       0|1:100:86
+8      107296374       .       A       G       .       PASS    AA=A;DP=95      GT:GQ:DP        0|0:95:32       1|0:67:14       0|1:100:49
+18     13513639        .       G       A       .       PASS    AA=G;DP=134     GT:GQ:DP        0|0:95:32       1|0:67:20       0|1:100:79
+1      55100177        .       C       T       .       PASS    AA=T;DP=122     GT:GQ:DP        0|0:95:32       1|0:71:24       0|1:100:65
+5      68078591        .       A       G       .       PASS    AA=G;DP=123     GT:GQ:DP        0|0:95:32       1|0:74:23       0|1:100:70
+10     108616974       rs12258589      C       T       .       PASS    AA=C;DP=118     GT:GQ:DP        0|0:95:32       1|0:79:28       0|1:100:57
+5      115200362       rs57633641      T       A       .       PASS    AA=T;DP=96      GT:GQ:DP        0|0:95:32       1|0:82:14       0|1:100:43
+3      135770665       rs4367113       G       A       .       PASS    AA=A;DP=107     GT:GQ:DP        0|0:95:32       1|0:82:15       0|1:100:42
+1      22396551        rs12086521      C       A       .       PASS    AA=C;DP=120;HM2;HM3     GT:GQ:DP        0|0:95:32       1|0:84:19       0|1:100:69
+2      175948835       .       G       T       .       PASS    AA=G;DP=129     GT:GQ:DP        0|0:95:32       1|0:86:21       0|1:100:80
+13     82291493        .       A       G       .       PASS    AA=A;DP=118     GT:GQ:DP        0|0:95:32       1|0:94:22       0|1:100:56
+1      198360587       rs60157286      G       A       .       PASS    AA=G;DP=114     GT:GQ:DP        0|0:95:32       1|0:95:17       0|1:100:68
+9      110713665       rs2297579       G       A       .       PASS    AA=G;DP=122     GT:GQ:DP        0|0:95:32       1|0:95:17       0|1:100:74
+7      86051551        rs6972995       T       C       .       PASS    AA=C;DP=144     GT:GQ:DP        0|0:95:32       1|0:95:28       0|1:100:82
+8      61510528        rs13256564      A       G       .       PASS    AA=A;DP=121     GT:GQ:DP        0|0:95:32       1|0:96:22       0|1:100:65
+16     27721973        rs1356046       C       T       .       PASS    AA=C;DP=112     GT:GQ:DP        0|0:95:32       1|0:98:13       0|1:100:67
+10     111895417       .       G       A       .       PASS    AA=G;DP=117     GT:GQ:DP        0|0:95:32       1|0:98:14       0|1:100:70
+5      168667914       .       C       T       .       PASS    AA=c;DP=93      GT:GQ:DP        0|0:95:32       1|0:98:17       0|1:100:33
+15     31137696        rs28437311      T       C       .       PASS    AA=C;DP=121     GT:GQ:DP        0|0:95:32       1|0:99:20       0|1:100:70
+14     68084205        rs2525530       C       T       .       PASS    AA=T;DP=128     GT:GQ:DP        0|0:95:33       0|1:100:13      0|0:100:81
+9      95282348        rs55812345      G       A       .       PASS    AA=G;DP=129     GT:GQ:DP        0|0:95:33       0|1:100:16      0|0:100:80
+3      23912793        rs9876561       G       A       .       PASS    AA=G;DP=140     GT:GQ:DP        0|0:95:33       0|1:100:21      0|0:100:35
+10     20843123        rs12262134      G       A       .       PASS    AA=G;DP=118     GT:GQ:DP        0|0:95:33       0|1:100:24      0|0:100:60
+11     114123700       .       T       C       .       PASS    AA=T;DP=139     GT:GQ:DP        0|0:95:33       0|1:100:27      0|0:100:77
+18     43724701        .       A       G       .       PASS    AA=A;DP=172     GT:GQ:DP        0|0:95:33       0|1:100:39      0|0:100:54
+9      26688487        rs7859236       C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        0|0:95:33       1|0:100:14      0|1:100:64
+1      228388115       rs12038714      A       G       .       PASS    AA=a;DP=137     GT:GQ:DP        0|0:95:33       1|0:100:15      0|1:100:88
+11     118902204       rs4938668       A       G       .       PASS    AA=a;DP=112     GT:GQ:DP        0|0:95:33       1|0:100:17      0|1:100:62
+15     27079232        .       C       T       .       PASS    AA=C;DP=137     GT:GQ:DP        0|0:95:33       1|0:100:21      0|1:100:85
+19     38261340        rs12461839      G       A       .       PASS    AA=C;DP=138     GT:GQ:DP        0|0:95:33       1|0:100:22      0|1:100:84
+8      3159609 .       A       G       .       PASS    AA=A;DP=110     GT:GQ:DP        0|0:95:33       1|0:100:23      0|1:100:38
+16     7959631 .       C       G       .       PASS    AA=C;DP=139     GT:GQ:DP        0|0:95:33       1|0:100:24      0|1:100:40
+3      9224174 rs1154391       T       C       .       PASS    AA=T;DP=144     GT:GQ:DP        0|0:95:33       1|0:100:27      0|1:100:75
+14     65173180        rs17826790      G       A       .       PASS    AA=G;DP=140     GT:GQ:DP        0|0:95:33       1|0:100:27      0|1:100:81
+2      79393780        rs17707159      G       C       .       PASS    AA=C;DP=141     GT:GQ:DP        0|0:95:33       1|0:100:28      0|1:100:81
+6      13663651        .       G       A       .       PASS    AA=G;DP=121     GT:GQ:DP        0|0:95:33       1|0:100:29      0|1:100:59
+3      80470101        rs9880779       A       G       .       PASS    AA=a;DP=136     GT:GQ:DP        0|0:95:33       1|0:100:30      0|1:100:75
+6      34873540        .       C       T       .       PASS    AA=C;DP=140     GT:GQ:DP        0|0:95:33       1|0:100:30      0|1:100:78
+6      82402171        .       G       C       .       PASS    AA=G;DP=156     GT:GQ:DP        0|0:95:33       1|0:100:36      0|1:100:87
+7      133290277       rs2971961       G       A       .       PASS    AA=A;DP=121     GT:GQ:DP        0|0:95:33       1|0:18:9        0|1:100:79
+14     97055636        .       G       A       .       PASS    AA=G;DP=126     GT:GQ:DP        0|0:95:33       1|0:45:21       0|1:100:70
+3      13240123        rs9851071       A       G       .       PASS    AA=A;DP=108     GT:GQ:DP        0|0:95:33       1|0:59:16       0|1:100:58
+22     26156718        .       A       C       .       PASS    AA=A;DP=130     GT:GQ:DP        0|0:95:33       1|0:64:22       0|1:100:76
+6      103305747       rs34408799      G       A       .       PASS    AA=G;DP=99      GT:GQ:DP        0|0:95:33       1|0:79:13       0|1:100:52
+10     72950613        rs10999861      A       G       .       PASS    AA=A;DP=100     GT:GQ:DP        0|0:95:33       1|0:97:14       0|1:100:52
+13     113536738       rs35616930      C       T       .       PASS    AA=C;DP=139     GT:GQ:DP        0|0:95:34       0|1:100:15      0|0:100:45
+7      154194713       .       G       A       .       PASS    AA=G;DP=134     GT:GQ:DP        0|0:95:34       1|0:100:27      0|1:100:31
+20     14893839        rs2327894       T       C       .       PASS    AA=t;DP=142     GT:GQ:DP        0|0:95:34       1|0:100:30      0|1:100:79
+1      115168883       .       C       T       .       PASS    AA=C;DP=96      GT:GQ:DP        0|0:95:34       1|0:78:16       0|1:100:45
+20     55150430        rs6123663       G       A       .       PASS    AA=A;DP=149     GT:GQ:DP        0|0:95:34       1|0:81:21       0|1:100:48
+17     2201291 rs9910250       A       G       .       PASS    AA=A;DP=100     GT:GQ:DP        0|0:95:34       1|0:97:14       0|1:77:52
+3      45231106        .       T       C       .       PASS    AA=T;DP=113     GT:GQ:DP        0|0:95:35       1|0:100:24      0|1:100:54
+1      45069339        rs2295998       C       T       .       PASS    AA=c;DP=117     GT:GQ:DP        0|0:95:35       1|0:49:13       0|1:100:68
+6      77195275        rs59683546      A       G       .       PASS    AA=A;DP=102     GT:GQ:DP        0|0:95:35       1|0:96:17       0|1:100:50
+5      143221844       rs161552        C       T       .       PASS    AA=C;DP=134     GT:GQ:DP        0|0:95:37       0|1:100:25      0|0:100:75
+15     50419507        .       C       T       .       PASS    AA=T;DP=142     GT:GQ:DP        0|0:95:37       1|0:100:20      0|1:100:85
+15     29850827        .       A       G       .       PASS    AA=G;DP=110     GT:GQ:DP        0|0:95:37       1|0:100:22      0|1:100:52
+2      235155540       rs1526107       T       C       .       PASS    AA=C;DP=158     GT:GQ:DP        0|0:95:38       0|1:100:21      0|0:100:53
+12     131345860       .       C       T       .       PASS    AA=c;DP=121     GT:GQ:DP        0|0:95:38       1|0:100:24      0|1:100:59
+1      78974220        rs2104565       G       A       .       PASS    AA=G;DP=137;HM2 GT:GQ:DP        0|0:95:38       1|0:100:26      0|1:100:73
+5      58455378        rs62356723      T       C       .       PASS    AA=T;DP=173     GT:GQ:DP        0|0:95:39       0|1:100:30      0|0:100:61
+20     40331453        rs16986727      G       A       .       PASS    AA=g;DP=143     GT:GQ:DP        0|0:95:40       1|0:100:25      0|1:100:79
+11     116945614       rs4936388       T       G       .       PASS    AA=T;DP=145     GT:GQ:DP        0|0:95:40       1|0:95:21       0|1:100:87
+19     11038777        .       C       T       .       PASS    AA=c;DP=124     GT:GQ:DP        0|0:95:41       1|1:15:15       0|1:100:68
+20     45743333        .       G       A       .       PASS    AA=g;DP=143     GT:GQ:DP        0|0:95:42       0|1:100:22      0|0:100:80
+8      8556372 rs28404324      C       T       .       PASS    AA=C;DP=154     GT:GQ:DP        0|0:95:42       0|1:100:24      0|0:100:90
+1      6866307 rs58627359      A       G       .       PASS    AA=G;DP=163     GT:GQ:DP        0|0:95:42       0|1:100:24      0|0:85:44
+2      38096743        rs17412105      C       A       .       PASS    AA=A;DP=189     GT:GQ:DP        0|0:95:42       0|1:100:31      0|0:100:54
+5      71383212        rs13158650      T       G       .       PASS    AA=T;DP=171     GT:GQ:DP        0|0:95:42       0|1:100:42      0|0:100:87
+17     30901221        rs55749002      C       G       .       PASS    AA=C;DP=144     GT:GQ:DP        0|0:95:43       1|0:100:24      0|1:100:77
+22     32175686        rs9609800       C       A       .       PASS    AA=C;DP=138     GT:GQ:DP        0|0:95:43       1|0:100:27      0|1:100:73
+10     13006244        rs4237430       C       T       .       PASS    AA=C;DP=156     GT:GQ:DP        0|0:95:43       1|0:100:29      0|1:100:86
+17     44472774        rs729003        C       T       .       PASS    AA=C;DP=111     GT:GQ:DP        0|0:95:43       1|0:52:14       0|1:100:53
+18     20041853        .       G       A       .       PASS    AA=G;DP=139     GT:GQ:DP        0|0:95:43       1|0:71:20       0|1:100:81
+2      187693588       rs1565077       C       T       .       PASS    AA=C;DP=137     GT:GQ:DP        0|0:95:43       1|0:71:26       0|1:100:73
+16     5175558 rs4786638       C       T       .       PASS    AA=C;DP=103     GT:GQ:DP        0|0:96:32       1|0:100:20      0|1:100:51
+8      112620671       .       T       A       .       PASS    AA=A;DP=98      GT:GQ:DP        0|0:96:32       1|1:17:18       0|1:100:49
+9      27573754        rs28522676      G       T       .       PASS    AA=g;DP=103     GT:GQ:DP        0|0:96:32       1|1:22:20       0|1:100:51
+19     22580386        rs10418610      G       C       .       PASS    AA=.;DP=117     GT:GQ:DP        0|0:96:32       1|1:24:19       0|1:100:67
+9      34513868        rs62559928      G       A       .       PASS    AA=G;DP=138     GT:GQ:DP        0|0:96:32       1|1:26:25       0|1:100:83
+11     50312264        rs3904264       G       A       .       PASS    AA=.;DP=124     GT:GQ:DP        0|0:96:32       1|1:31:23       0|1:100:69
+2      223369547       rs9653359       G       A       .       PASS    AA=A;DP=120     GT:GQ:DP        0|0:96:32       1|1:34:13       0|1:100:37
+15     68129708        rs616487        T       C       .       PASS    AA=T;DP=130     GT:GQ:DP        0|0:96:32       1|1:38:21       0|1:100:76
+1      166409113       rs4657739       C       T       .       PASS    AA=C;DP=147;HM2;HM3     GT:GQ:DP        0|0:96:32       1|1:39:26       0|1:100:89
+5      141052051       rs56312146      C       T       .       PASS    AA=C;DP=108     GT:GQ:DP        0|0:96:32       1|1:40:15       0|1:100:62
+2      84277079        rs4832070       A       T       .       PASS    AA=A;DP=129     GT:GQ:DP        0|0:96:32       1|1:40:16       0|1:100:65
+12     40460698        rs10880160      C       T       .       PASS    AA=T;DP=114     GT:GQ:DP        0|0:96:32       1|1:49:19       0|1:100:62
+4      152760506       rs2406976       G       C       .       PASS    AA=C;DP=120     GT:GQ:DP        0|0:96:32       1|1:49:24       0|1:100:24
+19     52909757        rs6509334       A       C       .       PASS    AA=A;DP=115     GT:GQ:DP        0|0:96:32       1|1:52:19       0|1:100:64
+17     17250141        rs34955670      T       C       .       PASS    AA=T;DP=148     GT:GQ:DP        0|0:96:32       1|1:55:21       0|1:100:95
+1      43927457        rs60794144      C       T       .       PASS    AA=C;DP=142     GT:GQ:DP        0|0:96:32       1|1:55:23       0|1:100:84
+1      80748607        rs61774398      G       A       .       PASS    AA=G;DP=143     GT:GQ:DP        0|0:96:32       1|1:56:32       0|1:100:80
+9      27687335        rs10511812      C       T       .       PASS    AA=C;DP=123     GT:GQ:DP        0|0:96:32       1|1:58:21       0|1:100:70
+4      54827082        rs4864864       C       T       .       PASS    AA=T;DP=119     GT:GQ:DP        0|0:96:32       1|1:59:24       0|1:100:61
+16     84470118        rs9936199       A       G       .       PASS    AA=G;DP=140     GT:GQ:DP        0|0:96:32       1|1:61:22       0|1:100:41
+18     3180126 .       A       G       .       PASS    AA=A;DP=132     GT:GQ:DP        0|0:96:32       1|1:62:31       0|1:100:64
+8      54314484        rs62505380      C       T       .       PASS    AA=T;DP=149     GT:GQ:DP        0|0:96:32       1|1:64:23       0|1:100:48
+17     30584100        rs34701040      C       T       .       PASS    AA=T;DP=132     GT:GQ:DP        0|0:96:32       1|1:64:24       0|1:100:78
+7      151786802       rs12668762      A       G       .       PASS    AA=A;DP=132     GT:GQ:DP        0|0:96:32       1|1:67:34       0|1:100:62
+5      141267632       rs56155926      A       C       .       PASS    AA=A;DP=116     GT:GQ:DP        0|0:96:32       1|1:70:25       0|1:100:60
+10     95110782        rs10882220      A       G       .       PASS    AA=A;DP=133     GT:GQ:DP        0|0:96:32       1|1:70:25       0|1:100:75
+4      9985103 rs57505196      A       G       .       PASS    AA=a;DP=170     GT:GQ:DP        0|0:96:32       1|1:70:26       0|1:100:64
+2      54757056        .       T       A       .       PASS    AA=T;DP=135     GT:GQ:DP        0|0:96:32       1|1:76:28       0|1:100:76
+4      61994259        rs1456878       G       A       .       PASS    AA=G;DP=131     GT:GQ:DP        0|0:96:32       1|1:79:28       0|1:100:70
+18     30866536        rs920799        C       A       .       PASS    AA=C;DP=147     GT:GQ:DP        0|0:96:32       1|1:79:28       0|1:100:87
+4      24612218        rs3796785       T       C       .       PASS    AA=C;DP=103     GT:GQ:DP        0|0:96:32       1|1:7:14        0|1:100:57
+20     2289875 rs2422714       G       T       .       PASS    AA=T;DP=119     GT:GQ:DP        0|0:96:32       1|1:7:14        0|1:100:73
+5      6850096 rs450804        C       T       .       PASS    AA=C;DP=146     GT:GQ:DP        0|0:96:32       1|1:85:31       0|1:100:85
+21     34859854        rs62211864      T       C       .       PASS    AA=C;DP=145     GT:GQ:DP        0|0:96:32       1|1:88:31       0|1:100:83
+21     28848252        rs2737051       T       C       .       PASS    AA=T;DP=128     GT:GQ:DP        0|0:96:32       1|1:88:32       0|1:100:52
+5      128102335       rs173519        A       C       .       PASS    AA=C;DP=99      GT:GQ:DP        0|0:96:33       1|1:19:13       0|1:100:53
+1      16278274        rs28601634      A       T       .       PASS    AA=T;DP=120     GT:GQ:DP        0|0:96:33       1|1:31:14       0|1:100:63
+16     76229634        rs11640175      T       C       .       PASS    AA=T;DP=115     GT:GQ:DP        0|0:96:33       1|1:36:25       0|1:100:47
+1      178966461       rs12081846      T       C       .       PASS    AA=t;DP=102     GT:GQ:DP        0|0:96:33       1|1:37:16       0|1:100:54
+2      85584690        .       C       T       .       PASS    AA=C;DP=133     GT:GQ:DP        0|0:96:33       1|1:49:18       0|1:100:81
+21     42657539        rs11909644      T       C       .       PASS    AA=T;DP=131     GT:GQ:DP        0|0:96:33       1|1:49:19       0|1:100:80
+2      198186565       rs1455653       G       A       .       PASS    AA=A;DP=126     GT:GQ:DP        0|0:96:33       1|1:58:22       0|1:100:73
+9      77770635        rs7041647       C       T       .       PASS    AA=C;DP=162     GT:GQ:DP        0|0:96:33       1|1:64:24       0|1:100:58
+3      5052998 .       G       C       .       PASS    AA=G;DP=133     GT:GQ:DP        0|0:96:33       1|1:67:24       0|1:100:40
+4      13704219        rs6854746       G       A       .       PASS    AA=G;DP=142     GT:GQ:DP        0|0:96:33       1|1:82:29       0|1:100:80
+8      9725929 rs4840448       G       A       .       PASS    AA=A;DP=93      GT:GQ:DP        0|0:96:34       1|1:19:17       0|1:100:43
+8      104434292       rs16870364      T       C       .       PASS    AA=C;DP=115     GT:GQ:DP        0|0:96:34       1|1:31:12       0|1:100:69
+22     21974631        .       C       T       .       PASS    AA=C;DP=126     GT:GQ:DP        0|0:96:34       1|1:37:14       0|1:100:80
+13     55981072        rs1417856       G       C       .       PASS    AA=G;DP=118     GT:GQ:DP        0|0:96:34       1|1:42:27       0|1:100:57
+17     42819966        rs4968319       A       G       .       PASS    AA=A;DP=127     GT:GQ:DP        0|0:96:36       1|0:100:28      0|1:100:65
+21     31967127        .       G       T       .       PASS    AA=G;DP=147     GT:GQ:DP        0|0:96:36       1|0:100:29      0|1:100:69
+7      4941978 .       T       C       .       PASS    AA=t;DP=122     GT:GQ:DP        0|0:96:37       0|1:100:20      0|0:100:65
+2      43450250        rs6705304       T       G       .       PASS    AA=T;DP=127     GT:GQ:DP        0|0:96:37       0|1:100:27      0|0:100:67
+15     76149861        rs60430205      C       T       .       PASS    AA=C;DP=135     GT:GQ:DP        0|0:96:38       1|0:100:22      0|1:100:75
+8      26541704        rs61623932      C       T       .       PASS    AA=C;DP=141     GT:GQ:DP        0|0:96:38       1|1:37:15       0|1:100:88
+10     42689358        rs2744073       A       G       .       PASS    AA=G;DP=126     GT:GQ:DP        0|0:96:39       1|0:100:18      0|1:100:57
+17     11103086        rs8078139       A       G       .       PASS    AA=A;DP=154     GT:GQ:DP        0|0:96:40       1|1:60:26       0|1:100:45
+15     90494430        rs12592574      T       G       .       PASS    AA=T;DP=144     GT:GQ:DP        0|0:96:44       1|1:82:29       0|1:100:58
+4      174489997       .       T       A       .       PASS    AA=T;DP=145     GT:GQ:DP        0|0:97:34       1|0:100:38      0|1:100:74
+18     32050878        .       A       C       .       PASS    AA=a;DP=131     GT:GQ:DP        0|0:97:34       1|0:97:22       0|1:100:77
+13     75962845        rs419462        G       T       .       PASS    AA=T;DP=151     GT:GQ:DP        0|0:97:36       1|1:39:26       0|1:100:90
+3      2179274 rs17194154      C       G       .       PASS    AA=c;DP=145     GT:GQ:DP        0|0:97:37       0|1:100:31      0|0:100:76
+18     74418727        rs1010557       T       C       .       PASS    AA=N;DP=122     GT:GQ:DP        0|0:97:38       0|1:100:22      0|0:100:63
+6      74691245        .       T       C       .       PASS    AA=T;DP=120     GT:GQ:DP        0|0:97:38       1|0:100:26      0|1:100:54
+2      183431265       .       A       G       .       PASS    AA=A;DP=148     GT:GQ:DP        0|0:97:38       1|0:100:28      0|1:100:81
+22     30953126        .       G       T       .       PASS    AA=G;DP=143     GT:GQ:DP        0|0:97:38       1|0:74:24       0|1:100:76
+9      1285602 rs10809850      T       C       .       PASS    AA=T;DP=152     GT:GQ:DP        0|0:97:39       1|0:100:24      0|1:100:43
+6      54386810        .       A       G       .       PASS    AA=A;DP=145     GT:GQ:DP        0|0:97:39       1|0:100:29      0|1:100:36
+19     6742475 rs2546124       G       A       .       PASS    AA=A;DP=142     GT:GQ:DP        0|0:97:40       1|0:100:25      0|1:100:76
+10     11199399        .       A       G       .       PASS    AA=G;DP=142     GT:GQ:DP        0|0:97:43       0|1:100:28      0|0:100:69
+9      11977368        rs4570261       G       T       .       PASS    AA=G;DP=133     GT:GQ:DP        0|0:97:44       1|1:67:24       0|1:100:64
+16     19629256        rs720174        C       T       .       PASS    AA=C;DP=121     GT:GQ:DP        0|0:98:31       0|1:100:13      0|0:100:76
+20     366334  rs6115983       A       G       .       PASS    AA=A;DP=120     GT:GQ:DP        0|0:98:31       0|1:100:13      0|0:100:76
+6      44073451        .       C       A       .       PASS    AA=C;DP=118     GT:GQ:DP        0|0:98:31       0|1:100:14      0|0:100:74
+4      24863351        rs11940599      C       T       .       PASS    AA=-;DP=92      GT:GQ:DP        0|0:98:31       0|1:100:15      0|0:100:46
+2      135274715       rs10195416      T       C       .       PASS    AA=T;DP=97      GT:GQ:DP        0|0:98:31       0|1:100:15      0|0:100:52
+4      26812817        rs4692022       G       A       .       PASS    AA=G;DP=116     GT:GQ:DP        0|0:98:31       0|1:100:15      0|0:100:71
+4      190730681       .       C       T       .       PASS    AA=C;DP=146     GT:GQ:DP        0|0:98:31       0|1:100:16      0|0:100:49
+3      46651039        rs1520487       T       C       .       PASS    AA=t;DP=140     GT:GQ:DP        0|0:98:31       0|1:100:16      0|0:100:51
+15     39539283        .       A       G       .       PASS    AA=A;DP=100     GT:GQ:DP        0|0:98:31       0|1:100:16      0|0:100:53
+1      208693211       .       G       A       .       PASS    AA=g;DP=100     GT:GQ:DP        0|0:98:31       0|1:100:16      0|0:100:56
+5      123774548       rs1027084       C       A       .       PASS    AA=C;DP=133     GT:GQ:DP        0|0:98:31       0|1:100:17      0|0:100:43
+12     97382083        rs829897        T       G       .       PASS    AA=T;DP=109     GT:GQ:DP        0|0:98:31       0|1:100:17      0|0:100:64
+4      83147278        rs6829471       G       C       .       PASS    AA=G;DP=132     GT:GQ:DP        0|0:98:31       0|1:100:18      0|0:100:43
+2      13040874        .       G       C       .       PASS    AA=G;DP=101     GT:GQ:DP        0|0:98:31       0|1:100:18      0|0:100:52
+13     53397140        .       C       G       .       PASS    AA=C;DP=138     GT:GQ:DP        0|0:98:31       0|1:100:18      0|0:100:86
+21     43897077        .       G       A       .       PASS    AA=G;DP=131     GT:GQ:DP        0|0:98:31       0|1:100:18      0|0:100:86
+6      70404468        rs57264079      G       A       .       PASS    AA=g;DP=153     GT:GQ:DP        0|0:98:31       0|1:100:19      0|0:100:51
+2      12988368        rs7587118       G       A       .       PASS    AA=G;DP=130     GT:GQ:DP        0|0:98:31       0|1:100:19      0|0:100:81
+4      119957179       rs56212415      C       T       .       PASS    AA=T;DP=127     GT:GQ:DP        0|0:98:31       0|1:100:19      0|0:99:34
+3      49407325        rs10155014      C       T       .       PASS    AA=T;DP=139     GT:GQ:DP        0|0:98:31       0|1:100:20      0|0:100:35
+3      29119921        rs11925827      G       A       .       PASS    AA=G;DP=121     GT:GQ:DP        0|0:98:31       0|1:100:20      0|0:100:73
+18     70029818        rs9952198       C       T       .       PASS    AA=T;DP=128     GT:GQ:DP        0|0:98:31       0|1:100:20      0|0:100:79
+4      54090769        rs17082957      A       T       .       PASS    AA=A;DP=147     GT:GQ:DP        0|0:98:31       0|1:100:21      0|0:100:48
+7      53418968        rs17832906      G       T       .       PASS    AA=G;DP=113     GT:GQ:DP        0|0:98:31       0|1:100:21      0|0:100:55
+16     13487885        .       G       A       .       PASS    AA=G;DP=125     GT:GQ:DP        0|0:98:31       0|1:100:21      0|0:100:67
+17     49219025        rs62072266      G       A       .       PASS    AA=G;DP=118     GT:GQ:DP        0|0:98:31       0|1:100:21      0|0:100:67
+18     42075225        .       C       T       .       PASS    AA=C;DP=128     GT:GQ:DP        0|0:98:31       0|1:100:21      0|0:100:72
+12     89136924        .       A       T       .       PASS    AA=A;DP=94      GT:GQ:DP        0|0:98:31       0|1:100:21      0|0:93:31
+7      158488006       .       C       G       .       PASS    AA=C;DP=133     GT:GQ:DP        0|0:98:31       0|1:100:22      0|0:100:36
+11     86901546        rs7931560       G       T       .       PASS    AA=G;DP=138     GT:GQ:DP        0|0:98:31       0|1:100:22      0|0:100:42
+9      77375114        .       G       A       .       PASS    AA=G;DP=153     GT:GQ:DP        0|0:98:31       0|1:100:22      0|0:100:50
+1      112589649       rs7556199       A       G       .       PASS    AA=A;DP=123;HM2 GT:GQ:DP        0|0:98:31       0|1:100:22      0|0:100:69
+12     128969604       rs61359910      T       C       .       PASS    AA=C;DP=131     GT:GQ:DP        0|0:98:31       0|1:100:22      0|0:100:78
+6      17092506        rs9383220       G       A       .       PASS    AA=A;DP=151     GT:GQ:DP        0|0:98:31       0|1:100:22      0|0:99:34
+8      21310131        .       A       T       .       PASS    AA=A;DP=131     GT:GQ:DP        0|0:98:31       0|1:100:23      0|0:100:38
+3      195264082       .       A       G       .       PASS    AA=A;DP=139     GT:GQ:DP        0|0:98:31       0|1:100:23      0|0:100:41
+11     11585211        rs11021952      G       C       .       PASS    AA=G;DP=151     GT:GQ:DP        0|0:98:31       0|1:100:23      0|0:100:50
+14     49867356        rs8012407       C       T       .       PASS    AA=C;DP=111     GT:GQ:DP        0|0:98:31       0|1:100:23      0|0:100:56
+4      67902836        rs7692918       T       A       .       PASS    AA=T;DP=113     GT:GQ:DP        0|0:98:31       0|1:100:23      0|0:100:57
+6      134501956       rs6911793       A       G       .       PASS    AA=G;DP=112     GT:GQ:DP        0|0:98:31       0|1:100:23      0|0:100:58
+2      217674209       .       G       T       .       PASS    AA=G;DP=118     GT:GQ:DP        0|0:98:31       0|1:100:23      0|0:100:62
+5      114558599       rs265413        A       G       .       PASS    AA=A;DP=112     GT:GQ:DP        0|0:98:31       0|1:100:23      0|0:100:62
+7      9038910 rs1030008       T       C       .       PASS    AA=C;DP=117     GT:GQ:DP        0|0:98:31       0|1:100:23      0|0:100:63
+14     71848534        .       T       C       .       PASS    AA=T;DP=119     GT:GQ:DP        0|0:98:31       0|1:100:23      0|0:100:67
+5      141815240       .       G       A       .       PASS    AA=G;DP=120     GT:GQ:DP        0|0:98:31       0|1:100:23      0|0:100:67
+3      451240  .       G       T       .       PASS    AA=T;DP=121     GT:GQ:DP        0|0:98:31       0|1:100:23      0|0:100:68
+2      136664832       rs57929419      A       G       .       PASS    AA=G;DP=133     GT:GQ:DP        0|0:98:31       0|1:100:23      0|0:100:80
+3      192848895       .       G       A       .       PASS    AA=G;DP=150     GT:GQ:DP        0|0:98:31       0|1:100:24      0|0:100:101
+14     67675975        rs2588831       A       G       .       PASS    AA=A;DP=116     GT:GQ:DP        0|0:98:31       0|1:100:24      0|0:100:49
+13     43047716        .       T       C       .       PASS    AA=T;DP=152     GT:GQ:DP        0|0:98:31       0|1:100:24      0|0:100:50
+15     89609853        .       G       A       .       PASS    AA=G;DP=131     GT:GQ:DP        0|0:98:31       0|1:100:24      0|0:100:79
+21     15807284        rs8131701       T       C       .       PASS    AA=T;DP=137     GT:GQ:DP        0|0:98:31       0|1:100:24      0|0:100:79
+14     25494969        rs2614516       C       G       .       PASS    AA=C;DP=134     GT:GQ:DP        0|0:98:31       0|1:100:24      0|0:100:81
+17     9312838 rs60760678      C       G       .       PASS    AA=C;DP=135     GT:GQ:DP        0|0:98:31       0|1:100:24      0|0:100:81
+8      23329559        rs12549531      C       T       .       PASS    AA=C;DP=155     GT:GQ:DP        0|0:98:31       0|1:100:25      0|0:100:48
+16     106922  .       C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        0|0:98:31       0|1:100:25      0|0:100:60
+14     98201839        rs10151854      A       G       .       PASS    AA=A;DP=120     GT:GQ:DP        0|0:98:31       0|1:100:25      0|0:100:65
+9      85377481        rs2065595       T       C       .       PASS    AA=T;DP=122     GT:GQ:DP        0|0:98:31       0|1:100:25      0|0:100:69
+19     7220319 .       G       A       .       PASS    AA=G;DP=123     GT:GQ:DP        0|0:98:31       0|1:100:25      0|0:100:70
+8      39104007        .       T       G       .       PASS    AA=T;DP=132     GT:GQ:DP        0|0:98:31       0|1:100:25      0|0:100:79
+1      65581551        .       T       C       .       PASS    AA=T;DP=138     GT:GQ:DP        0|0:98:31       0|1:100:25      0|0:100:81
+10     19524106        rs55654735      C       T       .       PASS    AA=c;DP=158     GT:GQ:DP        0|0:98:31       0|1:100:26      0|0:100:47
+13     78225384        rs17070223      A       G       .       PASS    AA=A;DP=121     GT:GQ:DP        0|0:98:31       0|1:100:26      0|0:100:49
+12     62704697        rs58129443      T       G       .       PASS    AA=T;DP=153     GT:GQ:DP        0|0:98:31       0|1:100:26      0|0:100:53
+4      42128592        rs7694811       G       A       .       PASS    AA=A;DP=130     GT:GQ:DP        0|0:98:31       0|1:100:26      0|0:100:73
+4      6814016 rs4689050       C       T       .       PASS    AA=T;DP=150     GT:GQ:DP        0|0:98:31       0|1:100:26      0|0:100:84
+20     46579225        rs6012462       G       A       .       PASS    AA=A;DP=144     GT:GQ:DP        0|0:98:31       0|1:100:26      0|0:100:86
+10     20371379        .       C       T       .       PASS    AA=C;DP=96      GT:GQ:DP        0|0:98:31       0|1:100:26      0|0:78:26
+7      46227110        rs6966342       T       C       .       PASS    AA=T;DP=143     GT:GQ:DP        0|0:98:31       0|1:100:27      0|0:100:41
+16     19948588        .       C       T       .       PASS    AA=C;DP=121     GT:GQ:DP        0|0:98:31       0|1:100:27      0|0:100:61
+14     101462873       rs1058327       C       G       .       PASS    AA=G;DP=128     GT:GQ:DP        0|0:98:31       0|1:100:27      0|0:100:70
+3      59986414        .       A       T       .       PASS    AA=A;DP=129     GT:GQ:DP        0|0:98:31       0|1:100:27      0|0:100:72
+16     87541267        .       C       T       .       PASS    AA=c;DP=130     GT:GQ:DP        0|0:98:31       0|1:100:27      0|0:100:74
+6      159804504       rs6905920       T       C       .       PASS    AA=C;DP=136     GT:GQ:DP        0|0:98:31       0|1:100:27      0|0:100:78
+17     3891353 rs28516899      G       A       .       PASS    AA=G;DP=142     GT:GQ:DP        0|0:98:31       0|1:100:27      0|0:100:84
+13     109411091       rs2095284       C       T       .       PASS    AA=C;DP=148     GT:GQ:DP        0|0:98:31       0|1:100:27      0|0:100:89
+7      32824322        rs11760370      C       T       .       PASS    AA=T;DP=124     GT:GQ:DP        0|0:98:31       0|1:100:27      0|0:63:21
+12     125095435       rs16920026      G       C       .       PASS    AA=G;DP=135     GT:GQ:DP        0|0:98:31       0|1:100:28      0|0:100:78
+7      61872227        .       A       G       .       PASS    AA=.;DP=128     GT:GQ:DP        0|0:98:31       0|1:100:29      0|0:100:68
+7      107758308       rs2300022       C       T       .       PASS    AA=C;DP=137     GT:GQ:DP        0|0:98:31       0|1:100:29      0|0:100:78
+14     40802426        .       C       T       .       PASS    AA=c;DP=143     GT:GQ:DP        0|0:98:31       0|1:100:29      0|0:100:83
+8      130018173       .       T       C       .       PASS    AA=T;DP=157     GT:GQ:DP        0|0:98:31       0|1:100:30      0|0:100:51
+5      41960706        rs2231910       T       C       .       PASS    AA=C;DP=164     GT:GQ:DP        0|0:98:31       0|1:100:30      0|0:100:58
+14     57615038        .       T       A       .       PASS    AA=T;DP=120     GT:GQ:DP        0|0:98:31       0|1:100:30      0|0:100:59
+1      191584164       .       G       A       .       PASS    AA=G;DP=123     GT:GQ:DP        0|0:98:31       0|1:100:30      0|0:100:61
+18     50464702        rs55655815      T       C       .       PASS    AA=C;DP=130     GT:GQ:DP        0|0:98:31       0|1:100:30      0|0:100:66
+1      88441165        rs1336573       T       C       .       PASS    AA=T;DP=129;HM2 GT:GQ:DP        0|0:98:31       0|1:100:30      0|0:100:71
+20     46001718        rs7509068       G       A       .       PASS    AA=G;DP=143     GT:GQ:DP        0|0:98:31       0|1:100:30      0|0:100:83
+8      131248243       .       A       C       .       PASS    AA=A;DP=151     GT:GQ:DP        0|0:98:31       0|1:100:30      0|0:100:90
+4      136068517       rs4541576       G       T       .       PASS    AA=T;DP=138     GT:GQ:DP        0|0:98:31       0|1:100:31      0|0:100:72
+9      37366275        .       G       A       .       PASS    AA=g;DP=139     GT:GQ:DP        0|0:98:31       0|1:100:31      0|0:100:73
+12     9923447 rs2034339       T       C       .       PASS    AA=T;DP=142     GT:GQ:DP        0|0:98:31       0|1:100:31      0|0:100:78
+7      4734564 rs7788807       T       C       .       PASS    AA=C;DP=139     GT:GQ:DP        0|0:98:31       0|1:100:31      0|0:100:78
+10     78209562        rs846627        A       G       .       PASS    AA=G;DP=142     GT:GQ:DP        0|0:98:31       0|1:100:31      0|0:100:80
+13     40441494        rs9532691       T       C       .       PASS    AA=T;DP=119     GT:GQ:DP        0|0:98:31       0|1:100:32      0|0:100:57
+1      236922538       .       G       A       .       PASS    AA=G;DP=131     GT:GQ:DP        0|0:98:31       0|1:100:32      0|0:100:72
+6      56690348        .       G       A       .       PASS    AA=g;DP=162     GT:GQ:DP        0|0:98:31       0|1:100:33      0|0:100:100
+15     61106329        rs58687289      T       C       .       PASS    AA=C;DP=135     GT:GQ:DP        0|0:98:31       0|1:100:33      0|0:100:72
+4      15482770        rs2532093       T       A       .       PASS    AA=A;DP=143     GT:GQ:DP        0|0:98:31       0|1:100:33      0|0:100:78
+2      18056083        .       C       G       .       PASS    AA=G;DP=162     GT:GQ:DP        0|0:98:31       0|1:100:33      0|0:100:97
+1      63642076        rs4915641       G       A       .       PASS    AA=g;DP=132;HM2 GT:GQ:DP        0|0:98:31       0|1:100:34      0|0:100:69
+8      33073858        .       G       A       .       PASS    AA=N;DP=145     GT:GQ:DP        0|0:98:31       0|1:100:35      0|0:100:80
+10     87823920        .       T       A       .       PASS    AA=T;DP=166     GT:GQ:DP        0|0:98:31       0|1:100:36      0|0:100:39
+2      97786412        rs17022581      C       T       .       PASS    AA=C;DP=180     GT:GQ:DP        0|0:98:31       0|1:100:36      0|0:100:64
+20     39981092        .       A       G       .       PASS    AA=A;DP=126     GT:GQ:DP        0|0:98:31       0|1:100:37      0|0:100:59
+7      61808069        .       A       G       .       PASS    AA=.;DP=135     GT:GQ:DP        0|0:98:31       0|1:100:37      0|0:100:67
+15     89657911        .       G       T       .       PASS    AA=g;DP=105     GT:GQ:DP        0|0:98:32       0|1:100:15      0|0:100:58
+2      235450766       .       T       C       .       PASS    AA=T;DP=118     GT:GQ:DP        0|0:98:32       0|1:100:15      0|0:100:74
+12     6212029 rs3181292       C       T       .       PASS    AA=C;DP=126     GT:GQ:DP        0|0:98:32       0|1:100:16      0|0:100:78
+3      4317353 rs310712        T       C       .       PASS    AA=T;DP=103     GT:GQ:DP        0|0:98:32       0|1:100:17      0|0:100:54
+21     40340828        .       A       T       .       PASS    AA=A;DP=104     GT:GQ:DP        0|0:98:32       0|1:100:17      0|0:100:56
+3      114495487       rs810209        G       A       .       PASS    AA=G;DP=113     GT:GQ:DP        0|0:98:32       0|1:100:18      0|0:100:63
+10     35771109        .       T       G       .       PASS    AA=T;DP=121     GT:GQ:DP        0|0:98:32       0|1:100:18      0|0:100:64
+20     52343361        rs1343080       A       C       .       PASS    AA=C;DP=118     GT:GQ:DP        0|0:98:32       0|1:100:18      0|0:100:66
+19     53162248        .       C       T       .       PASS    AA=c;DP=121     GT:GQ:DP        0|0:98:32       0|1:100:18      0|0:100:71
+5      7437346 rs13189928      G       A       .       PASS    AA=G;DP=122     GT:GQ:DP        0|0:98:32       0|1:100:18      0|0:100:76
+4      83516883        .       C       T       .       PASS    AA=C;DP=150     GT:GQ:DP        0|0:98:32       0|1:100:19      0|0:100:45
+4      176089607       .       T       A       .       PASS    AA=T;DP=117     GT:GQ:DP        0|0:98:32       0|1:100:19      0|0:100:64
+16     86172138        rs6540062       A       C       .       PASS    AA=C;DP=116     GT:GQ:DP        0|0:98:32       0|1:100:20      0|0:100:64
+3      70487598        .       T       C       .       PASS    AA=T;DP=113     GT:GQ:DP        0|0:98:32       0|1:100:20      0|0:100:67
+16     11452242        rs6498192       G       A       .       PASS    AA=A;DP=145     GT:GQ:DP        0|0:98:32       0|1:100:20      0|0:100:81
+1      24717543        rs7521450       T       A       .       PASS    AA=T;DP=135;HM2 GT:GQ:DP        0|0:98:32       0|1:100:21      0|0:100:37
+6      21362050        rs11758674      T       C       .       PASS    AA=T;DP=153     GT:GQ:DP        0|0:98:32       0|1:100:21      0|0:100:51
+13     74774561        .       C       T       .       PASS    AA=C;DP=119     GT:GQ:DP        0|0:98:32       0|1:100:21      0|0:100:68
+2      225105117       rs13006563      T       C       .       PASS    AA=T;DP=132     GT:GQ:DP        0|0:98:32       0|1:100:21      0|0:100:80
+6      15204156        rs1625591       T       C       .       PASS    AA=T;DP=137     GT:GQ:DP        0|0:98:32       0|1:100:22      0|0:100:38
+5      5958536 .       T       C       .       PASS    AA=t;DP=144     GT:GQ:DP        0|0:98:32       0|1:100:22      0|0:100:47
+2      16420241        .       C       T       .       PASS    AA=C;DP=126     GT:GQ:DP        0|0:98:32       0|1:100:22      0|0:100:69
+18     68176939        rs11151754      C       G       .       PASS    AA=G;DP=125     GT:GQ:DP        0|0:98:32       0|1:100:22      0|0:100:75
+4      25762581        .       G       C       .       PASS    AA=G;DP=128     GT:GQ:DP        0|0:98:32       0|1:100:22      0|0:100:75
+6      47233768        rs9473020       G       A       .       PASS    AA=G;DP=143     GT:GQ:DP        0|0:98:32       0|1:100:22      0|0:100:88
+5      171821328       rs2569247       C       G       .       PASS    AA=C;DP=142     GT:GQ:DP        0|0:98:32       0|1:100:22      0|0:100:89
+9      4378752 .       T       C       .       PASS    AA=T;DP=109     GT:GQ:DP        0|0:98:32       0|1:100:23      0|0:100:55
+6      83993166        .       T       A       .       PASS    AA=T;DP=107     GT:GQ:DP        0|0:98:32       0|1:100:23      0|0:100:57
+7      115723226       .       T       C       .       PASS    AA=T;DP=133     GT:GQ:DP        0|0:98:32       0|1:100:23      0|0:100:78
+1      199263402       .       T       A       .       PASS    AA=T;DP=110     GT:GQ:DP        0|0:98:32       0|1:100:24      0|0:100:55
+13     113897903       .       G       A       .       PASS    AA=G;DP=136     GT:GQ:DP        0|0:98:32       0|1:100:24      0|0:100:80
+5      75163477        .       A       T       .       PASS    AA=A;DP=132     GT:GQ:DP        0|0:98:32       0|1:100:24      0|0:99:33
+7      141639654       .       A       G       .       PASS    AA=G;DP=142     GT:GQ:DP        0|0:98:32       0|1:100:26      0|0:100:43
+8      75132507        rs28439343      A       G       .       PASS    AA=A;DP=160     GT:GQ:DP        0|0:98:32       0|1:100:26      0|0:100:57
+3      184921006       rs9880287       T       C       .       PASS    AA=T;DP=122     GT:GQ:DP        0|0:98:32       0|1:100:26      0|0:100:62
+8      130831914       .       T       C       .       PASS    AA=T;DP=132     GT:GQ:DP        0|0:98:32       0|1:100:26      0|0:100:76
+4      79139749        rs10027739      C       T       .       PASS    AA=C;DP=137     GT:GQ:DP        0|0:98:32       0|1:100:26      0|0:100:78
+6      18129143        .       C       T       .       PASS    AA=c;DP=141     GT:GQ:DP        0|0:98:32       0|1:100:26      0|0:100:82
+11     122976684       .       A       G       .       PASS    AA=A;DP=146     GT:GQ:DP        0|0:98:32       0|1:100:27      0|0:100:39
+15     58830427        rs1817479       G       C       .       PASS    AA=G;DP=146     GT:GQ:DP        0|0:98:32       0|1:100:27      0|0:100:47
+1      83985031        rs11163822      C       T       .       PASS    AA=C;DP=160     GT:GQ:DP        0|0:98:32       0|1:100:27      0|0:100:51
+19     46228885        rs10402611      G       C       .       PASS    AA=N;DP=168     GT:GQ:DP        0|0:98:32       0|1:100:27      0|0:100:64
+5      160147737       .       T       G       .       PASS    AA=T;DP=133     GT:GQ:DP        0|0:98:32       0|1:100:27      0|0:100:78
+5      71011178        .       C       T       .       PASS    AA=C;DP=154     GT:GQ:DP        0|0:98:32       0|1:100:27      0|0:100:93
+15     32201412        rs2576297       A       G       .       PASS    AA=A;DP=125     GT:GQ:DP        0|0:98:32       0|1:100:28      0|0:100:66
+1      190178762       .       C       G       .       PASS    AA=C;DP=124     GT:GQ:DP        0|0:98:32       0|1:100:29      0|0:100:63
+22     27139594        rs16986390      T       C       .       PASS    AA=T;DP=123     GT:GQ:DP        0|0:98:32       0|1:100:29      0|0:100:63
+6      29780144        rs3131865       G       C       .       PASS    AA=C;DP=158     GT:GQ:DP        0|0:98:32       0|1:100:29      0|0:100:96
+18     10957453        rs8099509       G       A       .       PASS    AA=G;DP=136     GT:GQ:DP        0|0:98:32       0|1:100:29      0|0:93:32
+4      171145183       rs7665859       A       T       .       PASS    AA=A;DP=121     GT:GQ:DP        0|0:98:32       0|1:100:30      0|0:100:59
+4      142985283       rs1155303       G       T       .       PASS    AA=T;DP=129     GT:GQ:DP        0|0:98:32       0|1:100:31      0|0:100:52
+16     25036791        rs7195548       T       C       .       PASS    AA=T;DP=162     GT:GQ:DP        0|0:98:32       0|1:100:31      0|0:100:54
+2      230976169       rs11692506      G       A       .       PASS    AA=G;DP=144     GT:GQ:DP        0|0:98:32       0|1:100:31      0|0:100:79
+12     61639725        rs772540        G       A       .       PASS    AA=G;DP=135     GT:GQ:DP        0|0:98:32       0|1:100:33      0|0:100:70
+1      218003516       rs17006604      C       G       .       PASS    AA=C;DP=142;HM2;HM3     GT:GQ:DP        0|0:98:32       0|1:100:34      0|0:100:76
+1      28027330        rs7532627       G       T       .       PASS    AA=G;DP=150;HM2 GT:GQ:DP        0|0:98:32       0|1:100:37      0|0:100:78
+10     114383498       rs11813406      T       C       .       PASS    AA=T;DP=108     GT:GQ:DP        0|0:98:32       1|0:100:12      0|1:100:63
+2      133642924       rs61188333      G       T       .       PASS    AA=G;DP=121     GT:GQ:DP        0|0:98:32       1|0:100:12      0|1:100:77
+5      148962554       rs35879891      A       T       .       PASS    AA=A;DP=126     GT:GQ:DP        0|0:98:32       1|0:100:12      0|1:100:85
+8      81976190        .       C       T       .       PASS    AA=C;DP=96      GT:GQ:DP        0|0:98:32       1|0:100:15      0|1:100:51
+5      360641  rs3777237       C       T       .       PASS    AA=C;DP=105     GT:GQ:DP        0|0:98:32       1|0:100:17      0|1:100:48
+10     77953029        rs2451911       T       C       .       PASS    AA=C;DP=122     GT:GQ:DP        0|0:98:32       1|0:100:17      0|1:100:73
+18     34838759        rs60895862      C       A       .       PASS    AA=C;DP=94      GT:GQ:DP        0|0:98:32       1|0:100:18      0|1:100:43
+17     32863475        rs736424        T       C       .       PASS    AA=t;DP=99      GT:GQ:DP        0|0:98:32       1|0:100:18      0|1:100:50
+10     9274353 .       G       A       .       PASS    AA=G;DP=108     GT:GQ:DP        0|0:98:32       1|0:100:18      0|1:100:60
+5      12124105        .       T       A       .       PASS    AA=T;DP=127     GT:GQ:DP        0|0:98:32       1|0:100:18      0|1:100:77
+2      146069941       rs10199425      A       G       .       PASS    AA=A;DP=129     GT:GQ:DP        0|0:98:32       1|0:100:18      0|1:100:78
+14     80167222        .       A       G       .       PASS    AA=A;DP=95      GT:GQ:DP        0|0:98:32       1|0:100:19      0|1:100:32
+8      144695343       .       G       A       .       PASS    AA=g;DP=132     GT:GQ:DP        0|0:98:32       1|0:100:19      0|1:100:41
+5      23421457        rs11949458      G       A       .       PASS    AA=G;DP=92      GT:GQ:DP        0|0:98:32       1|0:100:19      0|1:100:43
+2      21390378        rs13427673      G       A       .       PASS    AA=G;DP=108     GT:GQ:DP        0|0:98:32       1|0:100:19      0|1:100:57
+6      116381423       rs496311        C       T       .       PASS    AA=C;DP=130     GT:GQ:DP        0|0:98:32       1|0:100:19      0|1:100:79
+3      27166324        rs7642078       T       C       .       PASS    AA=T;DP=138     GT:GQ:DP        0|0:98:32       1|0:100:19      0|1:100:85
+4      75601378        rs3104139       G       A       .       PASS    AA=G;DP=135     GT:GQ:DP        0|0:98:32       1|0:100:19      0|1:100:86
+3      142524479       rs4325905       G       C       .       PASS    AA=G;DP=142     GT:GQ:DP        0|0:98:32       1|0:100:20      0|1:100:38
+17     50038830        rs9896097       G       T       .       PASS    AA=T;DP=98      GT:GQ:DP        0|0:98:32       1|0:100:20      0|1:100:45
+12     87145839        .       G       A       .       PASS    AA=-;DP=123     GT:GQ:DP        0|0:98:32       1|0:100:20      0|1:100:72
+10     44061262        rs494207        G       A       .       PASS    AA=G;DP=142     GT:GQ:DP        0|0:98:32       1|0:100:20      0|1:100:76
+22     37992496        rs5757584       C       T       .       PASS    AA=C;DP=154     GT:GQ:DP        0|0:98:32       1|0:100:21      0|1:100:101
+11     50528170        rs8186349       A       T       .       PASS    AA=.;DP=102     GT:GQ:DP        0|0:98:32       1|0:100:21      0|1:100:51
+15     98323270        rs12442203      C       A       .       PASS    AA=C;DP=113     GT:GQ:DP        0|0:98:32       1|0:100:21      0|1:100:51
+2      198434894       rs700689        A       G       .       PASS    AA=A;DP=110     GT:GQ:DP        0|0:98:32       1|0:100:21      0|1:100:53
+4      172536789       .       C       A       .       PASS    AA=c;DP=108     GT:GQ:DP        0|0:98:32       1|0:100:21      0|1:100:57
+13     32570312        rs6561716       T       G       .       PASS    AA=G;DP=115     GT:GQ:DP        0|0:98:32       1|0:100:21      0|1:100:61
+3      85443767        rs12491352      A       G       .       PASS    AA=A;DP=119     GT:GQ:DP        0|0:98:32       1|0:100:21      0|1:100:65
+13     69093670        rs17085240      T       C       .       PASS    AA=T;DP=125     GT:GQ:DP        0|0:98:32       1|0:100:21      0|1:100:71
+12     111705757       .       G       C       .       PASS    AA=G;DP=128     GT:GQ:DP        0|0:98:32       1|0:100:21      0|1:100:78
+8      137586747       rs61584990      T       C       .       PASS    AA=T;DP=115     GT:GQ:DP        0|0:98:32       1|0:100:22      0|1:100:62
+20     4735857 .       T       G       .       PASS    AA=T;DP=119     GT:GQ:DP        0|0:98:32       1|0:100:22      0|1:100:64
+8      142254905       .       A       G       .       PASS    AA=A;DP=139     GT:GQ:DP        0|0:98:32       1|0:100:22      0|1:100:72
+4      55083756        rs17084421      A       T       .       PASS    AA=A;DP=141     GT:GQ:DP        0|0:98:32       1|0:100:22      0|1:100:86
+6      154806939       .       C       T       .       PASS    AA=C;DP=119     GT:GQ:DP        0|0:98:32       1|0:100:23      0|1:100:63
+10     80199975        rs56730536      C       T       .       PASS    AA=C;DP=123     GT:GQ:DP        0|0:98:32       1|0:100:23      0|1:100:69
+7      37379438        rs6966351       A       C       .       PASS    AA=A;DP=124     GT:GQ:DP        0|0:98:32       1|0:100:23      0|1:100:69
+11     120666512       .       G       C       .       PASS    AA=g;DP=112     GT:GQ:DP        0|0:98:32       1|0:100:24      0|1:100:56
+5      71302344        rs2662316       A       C       .       PASS    AA=A;DP=118     GT:GQ:DP        0|0:98:32       1|0:100:24      0|1:100:62
+5      13508279        rs1981975       T       C       .       PASS    AA=T;DP=131     GT:GQ:DP        0|0:98:32       1|0:100:24      0|1:100:73
+4      71824826        rs13353608      G       C       .       PASS    AA=C;DP=129     GT:GQ:DP        0|0:98:32       1|0:100:24      0|1:100:74
+7      37867527        rs17171184      G       A       .       PASS    AA=G;DP=135     GT:GQ:DP        0|0:98:32       1|0:100:24      0|1:100:78
+3      182985042       .       C       T       .       PASS    AA=C;DP=146     GT:GQ:DP        0|0:98:32       1|0:100:25      0|1:100:50
+4      133753911       rs2043513       T       C       .       PASS    AA=N;DP=124     GT:GQ:DP        0|0:98:32       1|0:100:25      0|1:100:53
+9      120424615       rs4300063       A       G       .       PASS    AA=G;DP=110     GT:GQ:DP        0|0:98:32       1|0:100:25      0|1:100:53
+7      2133109 rs60269644      C       T       .       PASS    AA=C;DP=183     GT:GQ:DP        0|0:98:32       1|0:100:25      0|1:100:56
+8      4068281 rs58802668      C       G       .       PASS    AA=C;DP=112     GT:GQ:DP        0|0:98:32       1|0:100:25      0|1:100:56
+11     110992316       rs571462        C       G       .       PASS    AA=C;DP=122     GT:GQ:DP        0|0:98:32       1|0:100:25      0|1:100:66
+14     74177288        .       T       C       .       PASS    AA=T;DP=127     GT:GQ:DP        0|0:98:32       1|0:100:25      0|1:100:69
+13     80668384        .       G       C       .       PASS    AA=C;DP=128     GT:GQ:DP        0|0:98:32       1|0:100:25      0|1:100:74
+16     50793103        rs1641366       A       G       .       PASS    AA=A;DP=128     GT:GQ:DP        0|0:98:32       1|0:100:25      0|1:100:74
+2      57830079        rs58884553      G       T       .       PASS    AA=T;DP=128     GT:GQ:DP        0|0:98:32       1|0:100:25      0|1:100:74
+1      86583281        rs1830675       T       C       .       PASS    AA=T;DP=134     GT:GQ:DP        0|0:98:32       1|0:100:25      0|1:100:75
+1      95914860        .       T       C       .       PASS    AA=T;DP=135     GT:GQ:DP        0|0:98:32       1|0:100:25      0|1:100:77
+13     106080427       rs9514558       A       C       .       PASS    AA=A;DP=140     GT:GQ:DP        0|0:98:32       1|0:100:25      0|1:100:83
+13     20995453        rs60181111      A       G       .       PASS    AA=A;DP=138     GT:GQ:DP        0|0:98:32       1|0:100:25      0|1:100:83
+1      65414761        rs7547221       T       C       .       PASS    AA=T;DP=148     GT:GQ:DP        0|0:98:32       1|0:100:25      0|1:100:91
+18     6645771 rs8095335       A       T       .       PASS    AA=T;DP=120     GT:GQ:DP        0|0:98:32       1|0:100:26      0|1:100:65
+3      97032728        rs934438        G       A       .       PASS    AA=G;DP=129     GT:GQ:DP        0|0:98:32       1|0:100:26      0|1:100:70
+2      77279625        .       G       A       .       PASS    AA=G;DP=134     GT:GQ:DP        0|0:98:32       1|0:100:26      0|1:100:76
+4      54049824        rs10011394      C       T       .       PASS    AA=T;DP=144     GT:GQ:DP        0|0:98:32       1|0:100:27      0|1:100:44
+11     20917493        rs4923184       A       G       .       PASS    AA=A;DP=113     GT:GQ:DP        0|0:98:32       1|0:100:27      0|1:100:53
+9      126015475       rs10986274      G       A       .       PASS    AA=G;DP=112     GT:GQ:DP        0|0:98:32       1|0:100:27      0|1:100:55
+8      64974690        .       G       A       .       PASS    AA=G;DP=124     GT:GQ:DP        0|0:98:32       1|0:100:27      0|1:100:66
+4      37477186        rs2911885       C       G       .       PASS    AA=G;DP=131     GT:GQ:DP        0|0:98:32       1|0:100:27      0|1:100:69
+2      38387245        rs56340266      G       A       .       PASS    AA=-;DP=134     GT:GQ:DP        0|0:98:32       1|0:100:27      0|1:100:76
+11     45720579        .       G       T       .       PASS    AA=G;DP=133     GT:GQ:DP        0|0:98:32       1|0:100:27      0|1:100:78
+8      31432855        rs7813138       A       T       .       PASS    AA=T;DP=159     GT:GQ:DP        0|0:98:32       1|0:100:28      0|1:100:51
+15     78443430        rs7177824       T       C       .       PASS    AA=T;DP=118     GT:GQ:DP        0|0:98:32       1|0:100:28      0|1:100:62
+12     19153640        rs60095091      C       T       .       PASS    AA=C;DP=122     GT:GQ:DP        0|0:98:32       1|0:100:28      0|1:100:65
+2      213604209       rs11888736      G       C       .       PASS    AA=G;DP=125     GT:GQ:DP        0|0:98:32       1|0:100:28      0|1:100:67
+12     74252500        rs10879929      A       G       .       PASS    AA=A;DP=131     GT:GQ:DP        0|0:98:32       1|0:100:28      0|1:100:71
+5      32663667        rs12173152      A       G       .       PASS    AA=A;DP=141     GT:GQ:DP        0|0:98:32       1|0:100:28      0|1:100:80
+14     65383320        .       A       G       .       PASS    AA=A;DP=139     GT:GQ:DP        0|0:98:32       1|0:100:28      0|1:100:82
+12     244297  .       C       T       .       PASS    AA=C;DP=172     GT:GQ:DP        0|0:98:32       1|0:100:29      0|1:100:112
+9      119024725       .       T       G       .       PASS    AA=T;DP=130     GT:GQ:DP        0|0:98:32       1|0:100:29      0|1:100:69
+4      46461995        .       A       G       .       PASS    AA=a;DP=138     GT:GQ:DP        0|0:98:32       1|0:100:29      0|1:100:78
+15     97566708        rs60982130      C       A       .       PASS    AA=C;DP=128     GT:GQ:DP        0|0:98:32       1|0:100:30      0|1:100:55
+12     77237929        .       C       T       .       PASS    AA=c;DP=139     GT:GQ:DP        0|0:98:32       1|0:100:30      0|1:100:78
+2      230951363       rs12105721      G       A       .       PASS    AA=G;DP=111     GT:GQ:DP        0|0:98:32       1|0:100:31      0|1:100:50
+1      96477796        rs12032831      C       T       .       PASS    AA=C;DP=121;HM2 GT:GQ:DP        0|0:98:32       1|0:100:31      0|1:100:58
+3      69839345        .       T       C       .       PASS    AA=T;DP=148     GT:GQ:DP        0|0:98:32       1|0:100:31      0|1:100:86
+6      72159358        rs9455457       G       A       .       PASS    AA=G;DP=127     GT:GQ:DP        0|0:98:32       1|0:100:32      0|1:100:68
+18     50606243        rs7242853       C       A       .       PASS    AA=C;DP=135     GT:GQ:DP        0|0:98:32       1|0:100:32      0|1:100:71
+12     49304383        rs1967576       C       A       .       PASS    AA=C;DP=138     GT:GQ:DP        0|0:98:32       1|0:100:33      0|1:100:74
+2      134803428       rs16830420      G       C       .       PASS    AA=G;DP=145     GT:GQ:DP        0|0:98:32       1|0:100:33      0|1:100:81
+5      169108076       rs6889103       T       C       .       PASS    AA=T;DP=153     GT:GQ:DP        0|0:98:32       1|0:100:33      0|1:100:90
+3      73053982        rs1502756       C       T       .       PASS    AA=C;DP=143     GT:GQ:DP        0|0:98:32       1|0:100:34      0|1:100:77
+3      84601455        .       G       A       .       PASS    AA=G;DP=151     GT:GQ:DP        0|0:98:32       1|0:100:34      0|1:100:82
+4      72267022        rs62302433      G       A       .       PASS    AA=G;DP=138     GT:GQ:DP        0|0:98:32       1|0:100:35      0|1:100:70
+19     57705711        .       A       G       .       PASS    AA=a;DP=149     GT:GQ:DP        0|0:98:32       1|0:100:35      0|1:100:82
+6      32532348        rs9268811       G       T       .       PASS    AA=G;DP=149     GT:GQ:DP        0|0:98:32       1|0:100:37      0|1:100:75
+19     6056844 .       G       T       .       PASS    AA=T;DP=178     GT:GQ:DP        0|0:98:32       1|0:100:39      0|1:100:61
+2      18565490        .       T       C       .       PASS    AA=T;DP=132     GT:GQ:DP        0|0:98:32       1|0:18:22       0|1:100:77
+15     25431673        .       C       T       .       PASS    AA=C;DP=123     GT:GQ:DP        0|0:98:32       1|0:29:23       0|1:100:30
+1      232781255       rs6586404       C       G       .       PASS    AA=C;DP=139;HM2 GT:GQ:DP        0|0:98:32       1|0:43:10       0|1:100:92
+13     85216117        rs7491718       C       T       .       PASS    AA=T;DP=113     GT:GQ:DP        0|0:98:32       1|0:43:16       0|1:100:64
+1      158917237       rs36100172      A       G       .       PASS    AA=A;DP=128     GT:GQ:DP        0|0:98:32       1|0:49:17       0|1:100:78
+2      46403037        rs10193827      C       T       .       PASS    AA=T;DP=142     GT:GQ:DP        0|0:98:32       1|0:50:29       0|1:100:79
+1      37553408        .       C       T       .       PASS    AA=C;DP=80      GT:GQ:DP        0|0:98:32       1|0:53:13       0|1:100:24
+17     16349569        .       A       G       .       PASS    AA=G;DP=119     GT:GQ:DP        0|0:98:32       1|0:59:22       0|1:100:66
+15     56708065        .       A       G       .       PASS    AA=A;DP=110     GT:GQ:DP        0|0:98:32       1|0:60:17       0|1:100:61
+9      5613116 rs57298483      C       G       .       PASS    AA=.;DP=87      GT:GQ:DP        0|0:98:32       1|0:60:9        0|1:100:37
+17     74015561        rs9902653       T       C       .       PASS    AA=T;DP=138     GT:GQ:DP        0|0:98:32       1|0:64:20       0|1:100:45
+13     20554800        .       T       G       .       PASS    AA=T;DP=119     GT:GQ:DP        0|0:98:32       1|0:65:21       0|1:100:65
+9      125991007       rs16927238      A       C       .       PASS    AA=C;DP=147     GT:GQ:DP        0|0:98:32       1|0:68:19       0|1:100:89
+1      25912906        rs60253352      G       A       .       PASS    AA=G;DP=94      GT:GQ:DP        0|0:98:32       1|0:75:12       0|1:100:45
+13     93916742        rs12877849      C       T       .       PASS    AA=T;DP=95      GT:GQ:DP        0|0:98:32       1|0:75:15       0|1:100:40
+5      97215790        rs58972515      G       T       .       PASS    AA=G;DP=136     GT:GQ:DP        0|0:98:32       1|0:75:16       0|1:100:91
+10     19216816        rs928058        T       C       .       PASS    AA=T;DP=124     GT:GQ:DP        0|0:98:32       1|0:75:18       0|1:100:73
+14     33786882        rs35590770      C       G       .       PASS    AA=C;DP=116     GT:GQ:DP        0|0:98:32       1|0:76:20       0|1:100:65
+3      17933762        .       C       T       .       PASS    AA=c;DP=123     GT:GQ:DP        0|0:98:32       1|0:76:26       0|1:100:64
+5      100268584       .       G       A       .       PASS    AA=G;DP=121     GT:GQ:DP        0|0:98:32       1|0:77:11       0|1:100:34
+3      65150284        .       C       A       .       PASS    AA=C;DP=140     GT:GQ:DP        0|0:98:32       1|0:79:18       0|1:100:49
+8      135730569       .       C       A       .       PASS    AA=C;DP=99      GT:GQ:DP        0|0:98:32       1|0:79:19       0|1:100:49
+11     42884932        rs11037132      C       T       .       PASS    AA=C;DP=113     GT:GQ:DP        0|0:98:32       1|0:79:21       0|1:100:60
+6      122137862       .       A       G       .       PASS    AA=A;DP=132     GT:GQ:DP        0|0:98:32       1|0:81:16       0|1:100:85
+8      4952282 .       C       T       .       PASS    AA=C;DP=109     GT:GQ:DP        0|0:98:32       1|0:82:23       0|1:100:54
+1      145610677       rs12119687      G       A       .       PASS    AA=G;DP=120     GT:GQ:DP        0|0:98:32       1|0:85:21       0|1:100:67
+13     112330614       rs7981828       T       C       .       PASS    AA=T;DP=114     GT:GQ:DP        0|0:98:32       1|0:87:14       0|1:100:70
+22     27888977        rs61500482      G       A       .       PASS    AA=G;DP=117     GT:GQ:DP        0|0:98:32       1|0:90:23       0|1:100:63
+4      169285449       rs58814757      G       A       .       PASS    AA=A;DP=130     GT:GQ:DP        0|0:98:32       1|0:91:20       0|1:100:38
+22     34286345        rs9622228       G       A       .       PASS    AA=G;DP=139     GT:GQ:DP        0|0:98:32       1|0:91:25       0|1:100:69
+8      110208651       .       T       C       .       PASS    AA=T;DP=139     GT:GQ:DP        0|0:98:32       1|0:92:26       0|1:100:82
+3      139939416       rs3729699       G       A       .       PASS    AA=G;DP=99      GT:GQ:DP        0|0:98:32       1|0:97:18       0|1:100:52
+18     24115286        rs7230852       T       C       .       PASS    AA=T;DP=104     GT:GQ:DP        0|0:98:32       1|0:98:25       0|1:100:47
+20     16813672        .       C       T       .       PASS    AA=C;DP=97      GT:GQ:DP        0|0:98:33       0|1:100:17      0|0:100:36
+1      109968780       .       G       T       .       PASS    AA=G;DP=110     GT:GQ:DP        0|0:98:33       0|1:100:17      0|0:100:49
+5      41398588        rs10512775      C       T       .       PASS    AA=C;DP=131     GT:GQ:DP        0|0:98:33       0|1:100:18      0|0:90:30
+2      182713830       rs1921153       G       T       .       PASS    AA=G;DP=107     GT:GQ:DP        0|0:98:33       0|1:100:19      0|0:100:53
+21     20993182        rs11088823      A       C       .       PASS    AA=C;DP=141     GT:GQ:DP        0|0:98:33       0|1:100:22      0|0:100:87
+15     22823955        rs17115045      A       G       .       PASS    AA=A;DP=138     GT:GQ:DP        0|0:98:33       0|1:100:23      0|0:99:36
+10     50430995        rs12268018      G       A       .       PASS    AA=G;DP=128     GT:GQ:DP        0|0:98:33       0|1:100:24      0|0:100:75
+6      1889999 rs2476464       C       G       .       PASS    AA=c;DP=142     GT:GQ:DP        0|0:98:33       0|1:100:25      0|0:100:40
+11     100143813       rs17095426      G       A       .       PASS    AA=G;DP=155     GT:GQ:DP        0|0:98:33       0|1:100:25      0|0:100:49
+6      146666727       rs10484860      C       T       .       PASS    AA=C;DP=142     GT:GQ:DP        0|0:98:33       0|1:100:28      0|0:100:79
+12     92585686        .       C       G       .       PASS    AA=G;DP=117     GT:GQ:DP        0|0:98:33       0|1:100:29      0|0:100:54
+1      37396261        rs4652939       G       A       .       PASS    AA=G;DP=130;HM2 GT:GQ:DP        0|0:98:33       0|1:100:29      0|0:100:67
+11     86575964        rs622473        C       T       .       PASS    AA=C;DP=154     GT:GQ:DP        0|0:98:33       0|1:100:29      0|0:100:91
+3      45776730        rs7652042       C       T       .       PASS    AA=T;DP=109     GT:GQ:DP        0|0:98:33       1|0:100:12      0|1:100:64
+2      192542190       rs10198482      A       G       .       PASS    AA=A;DP=91      GT:GQ:DP        0|0:98:33       1|0:100:14      0|1:100:44
+8      10944150        rs62490743      C       T       .       PASS    AA=C;DP=114     GT:GQ:DP        0|0:98:33       1|0:100:14      0|1:100:68
+16     49275791        .       C       T       .       PASS    AA=C;DP=123     GT:GQ:DP        0|0:98:33       1|0:100:15      0|1:100:78
+10     5844129 rs2797498       G       C       .       PASS    AA=G;DP=120     GT:GQ:DP        0|0:98:33       1|0:100:16      0|1:100:30
+20     46452143        rs16993726      A       T       .       PASS    AA=A;DP=123     GT:GQ:DP        0|0:98:33       1|0:100:16      0|1:100:67
+14     34807886        .       C       T       .       PASS    AA=C;DP=125     GT:GQ:DP        0|0:98:33       1|0:100:17      0|1:100:71
+3      144899425       rs12490934      A       T       .       PASS    AA=T;DP=118     GT:GQ:DP        0|0:98:33       1|0:100:18      0|1:100:66
+14     42289162        .       G       A       .       PASS    AA=G;DP=115     GT:GQ:DP        0|0:98:33       1|0:100:18      0|1:100:67
+6      76544497        rs9447549       G       A       .       PASS    AA=A;DP=106     GT:GQ:DP        0|0:98:33       1|0:100:19      0|1:100:57
+1      213790703       .       C       T       .       PASS    AA=C;DP=113     GT:GQ:DP        0|0:98:33       1|0:100:19      0|1:100:62
+3      66051270        rs60005481      A       C       .       PASS    AA=N;DP=139     GT:GQ:DP        0|0:98:33       1|0:100:20      0|1:100:44
+13     29570420        rs17589063      C       A       .       PASS    AA=C;DP=117     GT:GQ:DP        0|0:98:33       1|0:100:20      0|1:100:64
+8      101319083       rs57609196      C       G       .       PASS    AA=C;DP=120     GT:GQ:DP        0|0:98:33       1|0:100:20      0|1:100:65
+14     75096449        rs6574247       G       T       .       PASS    AA=G;DP=136     GT:GQ:DP        0|0:98:33       1|0:100:20      0|1:100:87
+2      42994989        rs11679640      C       G       .       PASS    AA=C;DP=114     GT:GQ:DP        0|0:98:33       1|0:100:21      0|1:100:62
+4      87053847        rs11930286      G       T       .       PASS    AA=G;DP=118     GT:GQ:DP        0|0:98:33       1|0:100:22      0|1:100:61
+7      141745215       rs2734068       T       C       .       PASS    AA=T;DP=118     GT:GQ:DP        0|0:98:33       1|0:100:23      0|1:100:61
+8      99799552        .       C       T       .       PASS    AA=C;DP=125     GT:GQ:DP        0|0:98:33       1|0:100:23      0|1:100:70
+3      107913368       .       A       T       .       PASS    AA=A;DP=116     GT:GQ:DP        0|0:98:33       1|0:100:24      0|1:100:61
+10     63249195        rs9651317       C       A       .       PASS    AA=C;DP=126     GT:GQ:DP        0|0:98:33       1|0:100:24      0|1:100:70
+12     78014000        .       C       T       .       PASS    AA=C;DP=141     GT:GQ:DP        0|0:98:33       1|0:100:24      0|1:100:84
+6      134806080       rs6930794       C       T       .       PASS    AA=C;DP=119     GT:GQ:DP        0|0:98:33       1|0:100:25      0|1:100:60
+5      123359970       rs10054528      A       G       .       PASS    AA=G;DP=138     GT:GQ:DP        0|0:98:33       1|0:100:25      0|1:100:82
+5      127615266       .       C       A       .       PASS    AA=c;DP=146     GT:GQ:DP        0|0:98:33       1|0:100:25      0|1:100:86
+5      2349824 rs6898118       A       G       .       PASS    AA=G;DP=144     GT:GQ:DP        0|0:98:33       1|0:100:26      0|1:100:43
+12     92797623        .       T       G       .       PASS    AA=T;DP=137     GT:GQ:DP        0|0:98:33       1|0:100:26      0|1:100:76
+16     84593564        rs16940248      C       T       .       PASS    AA=C;DP=146     GT:GQ:DP        0|0:98:33       1|0:100:26      0|1:100:88
+13     21528555        rs9552586       A       G       .       PASS    AA=A;DP=146     GT:GQ:DP        0|0:98:33       1|0:100:28      0|1:100:43
+7      28976916        rs221179        T       C       .       PASS    AA=T;DP=140     GT:GQ:DP        0|0:98:33       1|0:100:28      0|1:100:80
+16     6852631 rs12449240      C       T       .       PASS    AA=C;DP=155     GT:GQ:DP        0|0:98:33       1|0:100:28      0|1:100:98
+6      20256743        rs16883424      T       C       .       PASS    AA=C;DP=139     GT:GQ:DP        0|0:98:33       1|0:100:29      0|1:100:35
+10     26219985        rs12766618      C       G       .       PASS    AA=C;DP=128     GT:GQ:DP        0|0:98:33       1|0:100:29      0|1:100:65
+12     125570628       .       C       T       .       PASS    AA=C;DP=130     GT:GQ:DP        0|0:98:33       1|0:100:29      0|1:100:72
+7      125583972       .       C       T       .       PASS    AA=C;DP=140     GT:GQ:DP        0|0:98:33       1|0:100:29      0|1:100:73
+1      192067074       rs1022961       C       T       .       PASS    AA=C;DP=128     GT:GQ:DP        0|0:98:33       1|0:100:31      0|1:100:70
+11     108550077       .       T       A       .       PASS    AA=T;DP=133     GT:GQ:DP        0|0:98:33       1|0:100:31      0|1:100:71
+1      196192538       rs60229537      C       T       .       PASS    AA=C;DP=147     GT:GQ:DP        0|0:98:33       1|0:100:32      0|1:100:83
+14     54849626        .       A       G       .       PASS    AA=A;DP=137     GT:GQ:DP        0|0:98:33       1|0:100:33      0|1:100:74
+1      59430050        .       C       T       .       PASS    AA=C;DP=128     GT:GQ:DP        0|0:98:33       1|0:100:35      0|1:100:61
+8      70515792        rs28688496      T       C       .       PASS    AA=T;DP=144     GT:GQ:DP        0|0:98:33       1|0:100:37      0|1:100:74
+10     72884588        rs10823757      C       T       .       PASS    AA=T;DP=151     GT:GQ:DP        0|0:98:33       1|0:100:38      0|1:100:81
+2      170676193       rs60710028      C       T       .       PASS    AA=C;DP=102     GT:GQ:DP        0|0:98:33       1|0:17:9        0|1:100:54
+13     19699358        rs945368        G       C       .       PASS    AA=C;DP=140     GT:GQ:DP        0|0:98:33       1|0:26:29       0|1:100:37
+4      171575062       rs28465274      G       A       .       PASS    AA=G;DP=103     GT:GQ:DP        0|0:98:33       1|0:33:11       0|1:100:60
+17     58936687        .       G       A       .       PASS    AA=g;DP=138     GT:GQ:DP        0|0:98:33       1|0:60:22       0|1:100:83
+19     53952954        .       G       A       .       PASS    AA=G;DP=105     GT:GQ:DP        0|0:98:33       1|0:62:15       0|1:100:58
+14     95051363        rs179152        C       T       .       PASS    AA=C;DP=109     GT:GQ:DP        0|0:98:33       1|0:65:15       0|1:100:63
+15     90215588        rs12903107      G       A       .       PASS    AA=G;DP=108     GT:GQ:DP        0|0:98:33       1|0:72:17       0|1:100:57
+12     43608796        rs401892        A       C       .       PASS    AA=A;DP=127     GT:GQ:DP        0|0:98:33       1|0:73:20       0|1:100:72
+2      240884241       rs12623010      G       A       .       PASS    AA=G;DP=95      GT:GQ:DP        0|0:98:33       1|0:78:17       0|1:100:41
+2      200953795       rs3769454       C       G       .       PASS    AA=C;DP=118     GT:GQ:DP        0|0:98:33       1|0:78:19       0|1:100:67
+4      108353545       .       A       T       .       PASS    AA=A;DP=139     GT:GQ:DP        0|0:98:33       1|0:82:24       0|1:100:77
+19     39007736        rs256335        C       T       .       PASS    AA=c;DP=123     GT:GQ:DP        0|0:98:33       1|0:85:20       0|1:100:73
+16     77902014        rs12600246      G       C       .       PASS    AA=G;DP=125     GT:GQ:DP        0|0:98:33       1|0:89:23       0|1:100:70
+13     24454102        rs9553499       C       T       .       PASS    AA=c;DP=113     GT:GQ:DP        0|0:98:33       1|0:91:12       0|1:100:69
+12     13575289        rs6488609       T       C       .       PASS    AA=C;DP=144     GT:GQ:DP        0|0:98:33       1|0:92:21       0|1:100:92
+4      184886446       .       G       A       .       PASS    AA=G;DP=149     GT:GQ:DP        0|0:98:34       0|1:100:24      0|0:100:80
+1      199312905       .       G       A       .       PASS    AA=G;DP=155     GT:GQ:DP        0|0:98:34       0|1:100:25      0|0:100:99
+18     10002204        rs16956032      G       A       .       PASS    AA=G;DP=150     GT:GQ:DP        0|0:98:34       0|1:100:28      0|0:100:90
+4      72352764        .       A       G       .       PASS    AA=A;DP=146     GT:GQ:DP        0|0:98:34       0|1:100:30      0|0:100:38
+8      76781625        rs28554476      G       A       .       PASS    AA=A;DP=150     GT:GQ:DP        0|0:98:34       0|1:100:32      0|0:100:71
+6      75227556        .       T       C       .       PASS    AA=T;DP=142     GT:GQ:DP        0|0:98:34       0|1:100:33      0|0:100:39
+19     42084450        .       A       G       .       PASS    AA=A;DP=115     GT:GQ:DP        0|0:98:34       1|0:100:20      0|1:100:62
+9      129196958       rs10987631      A       C       .       PASS    AA=A;DP=118     GT:GQ:DP        0|0:98:34       1|0:100:21      0|1:100:65
+2      121521884       .       C       G       .       PASS    AA=C;DP=119     GT:GQ:DP        0|0:98:34       1|0:100:22      0|1:100:60
+18     13699415        rs1284208       C       G       .       PASS    AA=C;DP=146     GT:GQ:DP        0|0:98:34       1|0:100:23      0|1:100:49
+7      19640889        .       C       A       .       PASS    AA=G;DP=127     GT:GQ:DP        0|0:98:34       1|0:100:24      0|1:100:69
+13     52652530        rs8002513       G       C       .       PASS    AA=G;DP=107     GT:GQ:DP        0|0:98:34       1|0:100:26      0|1:100:48
+5      93998790        rs1390642       C       A       .       PASS    AA=C;DP=138     GT:GQ:DP        0|0:98:34       1|0:100:27      0|1:100:78
+9      79092398        .       A       G       .       PASS    AA=A;DP=131     GT:GQ:DP        0|0:98:34       1|0:100:28      0|1:100:69
+1      162956394       .       C       T       .       PASS    AA=C;DP=138     GT:GQ:DP        0|0:98:34       1|0:100:28      0|1:100:76
+6      35315692        .       G       A       .       PASS    AA=G;DP=157     GT:GQ:DP        0|0:98:34       1|0:100:32      0|1:100:92
+4      556643  .       T       A       .       PASS    AA=T;DP=131     GT:GQ:DP        0|0:98:34       1|0:25:14       0|1:100:83
+16     50009019        rs7200325       C       T       .       PASS    AA=T;DP=141     GT:GQ:DP        0|0:98:34       1|0:68:26       0|1:100:81
+2      129022494       .       T       C       .       PASS    AA=T;DP=133     GT:GQ:DP        0|0:98:34       1|0:70:14       0|1:100:83
+7      77431777        rs848469        C       T       .       PASS    AA=C;DP=96      GT:GQ:DP        0|0:98:34       1|0:73:10       0|1:100:52
+5      126279150       .       C       T       .       PASS    AA=T;DP=152     GT:GQ:DP        0|0:98:34       1|0:87:30       0|1:100:89
+6      131107296       .       G       C       .       PASS    AA=G;DP=143     GT:GQ:DP        0|0:98:34       1|0:95:25       0|1:100:80
+14     33974251        rs61748988      C       T       .       PASS    AA=C;DP=131     GT:GQ:DP        0|0:98:35       0|1:100:17      0|0:99:33
+9      99402989        .       T       C       .       PASS    AA=T;DP=142     GT:GQ:DP        0|0:98:35       1|0:100:21      0|1:100:87
+3      156652281       rs57461710      A       G       .       PASS    AA=G;DP=119     GT:GQ:DP        0|0:98:35       1|0:100:23      0|1:100:47
+12     56229239        rs1148552       C       T       .       PASS    AA=C;DP=149     GT:GQ:DP        0|0:98:35       1|0:100:24      0|1:100:93
+13     38524951        rs9603500       G       A       .       PASS    AA=G;DP=116     GT:GQ:DP        0|0:98:35       1|0:100:25      0|1:100:60
+1      3615133 rs11806612      C       T       .       PASS    AA=C;DP=107     GT:GQ:DP        0|0:98:35       1|0:19:10       0|1:100:59
+18     66332141        .       A       G       .       PASS    AA=a;DP=127     GT:GQ:DP        0|0:98:35       1|0:71:17       0|1:100:76
+13     72693728        rs9543277       G       A       .       PASS    AA=G;DP=116     GT:GQ:DP        0|0:98:35       1|0:77:16       0|1:100:65
+11     114948991       rs2513631       C       T       .       PASS    AA=-;DP=126     GT:GQ:DP        0|0:98:35       1|0:78:16       0|1:100:77
+10     3992033 rs7895964       A       C       .       PASS    AA=C;DP=120     GT:GQ:DP        0|0:98:35       1|1:33:25       0|1:100:52
+10     56786075        .       C       T       .       PASS    AA=C;DP=125     GT:GQ:DP        0|0:98:36       0|1:100:28      0|0:100:63
+2      74029225        rs7606862       T       C       .       PASS    AA=T;DP=124     GT:GQ:DP        0|0:98:37       0|1:100:19      0|0:100:68
+12     126356078       .       C       T       .       PASS    AA=C;DP=160     GT:GQ:DP        0|0:98:37       0|1:100:26      0|0:100:55
+10     43550907        rs4948759       G       A       .       PASS    AA=G;DP=154     GT:GQ:DP        0|0:98:37       0|1:100:27      0|0:100:90
+16     79761383        rs9927671       C       T       .       PASS    AA=C;DP=138     GT:GQ:DP        0|0:98:37       1|0:100:16      0|1:100:38
+2      172005028       rs55999882      A       G       .       PASS    AA=G;DP=122     GT:GQ:DP        0|0:98:38       0|1:100:10      0|0:100:75
+13     35586888        rs7999818       T       C       .       PASS    AA=T;DP=101     GT:GQ:DP        0|0:98:38       1|0:100:20      0|1:100:44
+5      64469520        rs16893417      A       G       .       PASS    AA=A;DP=144     GT:GQ:DP        0|0:98:39       0|1:100:27      0|0:100:78
+17     74454244        rs7221788       A       G       .       PASS    AA=A;DP=114     GT:GQ:DP        0|0:98:39       1|1:25:10       0|1:100:65
+10     49685217        rs2448539       T       G       .       PASS    AA=T;DP=145     GT:GQ:DP        0|0:98:41       1|1:53:31       0|1:100:75
+7      89936839        rs10268928      A       C       .       PASS    AA=A;DP=154     GT:GQ:DP        0|0:98:43       0|1:100:22      0|0:100:89
+3      49132775        rs6779394       G       A       .       PASS    AA=A;DP=91      GT:GQ:DP        0|0:99:33       1|1:16:9        0|1:100:52
+1      14391944        .       A       C       .       PASS    AA=A;DP=106     GT:GQ:DP        0|0:99:33       1|1:17:22       0|1:100:51
+7      110631031       rs214455        A       G       .       PASS    AA=G;DP=113     GT:GQ:DP        0|0:99:33       1|1:19:19       0|1:100:61
+10     130208207       rs10829419      A       G       .       PASS    AA=G;DP=128     GT:GQ:DP        0|0:99:33       1|1:19:19       0|1:100:75
+1      73739917        rs11800984      A       C       .       PASS    AA=C;DP=137     GT:GQ:DP        0|0:99:33       1|1:29:20       0|1:100:79
+7      126667863       rs11563673      A       G       .       PASS    AA=G;DP=116     GT:GQ:DP        0|0:99:33       1|1:40:16       0|1:100:70
+14     93885021        rs7148985       C       T       .       PASS    AA=C;DP=137     GT:GQ:DP        0|0:99:33       1|1:46:17       0|1:100:70
+19     56352710        rs273668        T       C       .       PASS    AA=C;DP=162     GT:GQ:DP        0|0:99:33       1|1:48:29       0|1:100:63
+20     38268047        rs6101903       C       T       .       PASS    AA=T;DP=117     GT:GQ:DP        0|0:99:33       1|1:49:18       0|1:100:67
+7      127524281       rs322818        C       A       .       PASS    AA=C;DP=121     GT:GQ:DP        0|0:99:33       1|1:49:18       0|1:100:68
+20     11666777        rs6074332       A       T       .       PASS    AA=A;DP=102     GT:GQ:DP        0|0:99:33       1|1:49:21       0|1:100:48
+1      245533161       rs56399534      C       T       .       PASS    AA=C;DP=105     GT:GQ:DP        0|0:99:33       1|1:52:19       0|1:100:52
+9      27216902        rs7024828       G       A       .       PASS    AA=A;DP=125     GT:GQ:DP        0|0:99:33       1|1:52:22       0|1:100:72
+1      164395030       rs9651038       A       G       .       PASS    AA=A;DP=139;HM2;HM3     GT:GQ:DP        0|0:99:33       1|1:52:22       0|1:100:85
+1      159075627       rs6682654       G       A       .       PASS    AA=G;DP=130;HM2;HM3     GT:GQ:DP        0|0:99:33       1|1:53:26       0|1:100:72
+1      44695220        rs4233494       G       A       .       PASS    AA=G;DP=104;HM2 GT:GQ:DP        0|0:99:33       1|1:55:20       0|1:100:51
+3      64708447        rs9834369       G       A       .       PASS    AA=g;DP=131     GT:GQ:DP        0|0:99:33       1|1:55:21       0|1:100:78
+11     13902270        rs7930084       G       A       .       PASS    AA=G;DP=156     GT:GQ:DP        0|0:99:33       1|1:55:31       0|1:100:94
+11     83527163        rs1014066       G       T       .       PASS    AA=T;DP=115     GT:GQ:DP        0|0:99:33       1|1:58:21       0|1:100:61
+15     65755356        rs60924420      G       A       .       PASS    AA=G;DP=160     GT:GQ:DP        0|0:99:33       1|1:58:22       0|1:100:60
+9      7702166 rs1412774       A       G       .       PASS    AA=A;DP=133     GT:GQ:DP        0|0:99:33       1|1:58:23       0|1:100:81
+12     49766298        rs7977993       T       C       .       PASS    AA=T;DP=154     GT:GQ:DP        0|0:99:33       1|1:64:25       0|1:100:51
+20     11792198        .       A       G       .       PASS    AA=A;DP=139     GT:GQ:DP        0|0:99:33       1|1:70:25       0|1:100:78
+4      170259280       rs2054223       G       A       .       PASS    AA=G;DP=136     GT:GQ:DP        0|0:99:33       1|1:73:26       0|1:100:76
+1      221294206       rs4585984       C       T       .       PASS    AA=N;DP=150     GT:GQ:DP        0|0:99:33       1|1:76:28       0|1:100:88
+5      53614708        rs35927 C       T       .       PASS    AA=c;DP=151     GT:GQ:DP        0|0:99:33       1|1:76:29       0|1:100:86
+3      171861876       .       G       A       .       PASS    AA=A;DP=117     GT:GQ:DP        0|0:99:33       1|1:79:29       0|1:100:56
+12     13273744        rs7979179       C       G       .       PASS    AA=C;DP=148     GT:GQ:DP        0|0:99:33       1|1:79:31       0|1:100:78
+4      32894031        rs7695326       C       A       .       PASS    AA=A;DP=153     GT:GQ:DP        0|0:99:33       1|1:88:31       0|1:100:76
+1      111798081       rs11102278      G       A       .       PASS    AA=A;DP=167     GT:GQ:DP        0|0:99:33       1|1:91:32       0|1:100:52
+6      121887055       rs1359233       G       A       .       PASS    AA=G;DP=143     GT:GQ:DP        0|0:99:33       1|1:91:32       0|1:100:74
+12     2537660 rs720722        A       G       .       PASS    AA=A;DP=119     GT:GQ:DP        0|0:99:34       1|1:22:18       0|1:100:66
+12     3100088 rs488225        A       G       .       PASS    AA=G;DP=87      GT:GQ:DP        0|0:99:34       1|1:25:10       0|1:100:35
+17     8340302 rs6503125       C       T       .       PASS    AA=C;DP=96      GT:GQ:DP        0|0:99:34       1|1:28:11       0|1:100:50
+4      188595929       rs3898495       G       T       .       PASS    AA=G;DP=109     GT:GQ:DP        0|0:99:34       1|1:30:17       0|1:100:58
+1      164168191       rs28522870      C       A       .       PASS    AA=C;DP=141     GT:GQ:DP        0|0:99:34       1|1:34:14       0|1:100:94
+12     115977247       rs16947281      A       G       .       PASS    AA=G;DP=102     GT:GQ:DP        0|0:99:34       1|1:43:16       0|1:100:54
+21     34595398        rs4816480       G       A       .       PASS    AA=G;DP=121     GT:GQ:DP        0|0:99:34       1|1:43:20       0|1:100:69
+18     75360689        rs9964464       A       G       .       PASS    AA=A;DP=120     GT:GQ:DP        0|0:99:34       1|1:44:21       0|1:100:63
+12     67828764        rs11610499      C       T       .       PASS    AA=N;DP=128     GT:GQ:DP        0|0:99:34       1|1:49:19       0|1:100:75
+8      105849531       rs17179594      A       G       .       PASS    AA=A;DP=141     GT:GQ:DP        0|0:99:34       1|1:55:20       0|1:100:48
+16     26883955        rs58920423      C       T       .       PASS    AA=T;DP=110     GT:GQ:DP        0|0:99:34       1|1:67:25       0|1:100:38
+15     86103835        rs8042403       A       G       .       PASS    AA=G;DP=122     GT:GQ:DP        0|0:99:34       1|1:67:26       0|1:100:65
+9      37542092        rs7031794       C       T       .       PASS    AA=T;DP=129     GT:GQ:DP        0|0:99:34       1|1:68:31       0|1:100:65
+10     70832448        .       C       T       .       PASS    AA=C;DP=126     GT:GQ:DP        0|0:99:34       1|1:70:26       0|1:100:66
+11     130472948       rs1945929       C       G       .       PASS    AA=G;DP=137     GT:GQ:DP        0|0:99:34       1|1:70:26       0|1:100:79
+16     10185510        rs9302424       G       C       .       PASS    AA=C;DP=141     GT:GQ:DP        0|0:99:34       1|1:76:27       0|1:100:80
+20     3994988 rs6052289       T       C       .       PASS    AA=C;DP=151     GT:GQ:DP        0|0:99:34       1|1:79:29       0|1:100:90
+7      7686873 rs10278708      G       T       .       PASS    AA=T;DP=97      GT:GQ:DP        0|0:99:35       1|1:40:15       0|1:100:46
+18     47083834        rs59378857      C       T       .       PASS    AA=C;DP=140     GT:GQ:DP        0|0:99:35       1|1:64:23       0|1:100:87
+7      75865547        .       G       A       .       PASS    AA=N;DP=128     GT:GQ:DP        0|0:99:36       1|1:8:11        0|1:100:81
+2      182608669       rs10202990      C       T       .       PASS    AA=C;DP=131     GT:GQ:DP        0|0:99:40       0|1:100:15      0|0:100:77
+11     13059466        rs2727397       C       A       .       PASS    AA=C;DP=171     GT:GQ:DP        0|0:99:42       1|1:76:27       0|1:100:54
+X      143852971       rs5966397       G       T       .       PASS    AA=G;DP=99      GT:GQ:DP        0|0:9:11        1|0:73:19       0|1:100:43
+2      150949881       .       G       A       .       PASS    AA=G;DP=79      GT:GQ:DP        0|1:100:10      0|0:37:14       0|0:100:54
+6      2879877 .       C       G       .       PASS    AA=C;DP=67      GT:GQ:DP        0|1:100:10      0|0:41:12       0|0:100:34
+14     25778481        .       C       T       .       PASS    AA=C;DP=100     GT:GQ:DP        0|1:100:10      0|0:47:14       0|0:90:32
+2      366524  .       C       T       .       PASS    AA=C;DP=90      GT:GQ:DP        0|1:100:10      0|0:53:16       0|0:100:63
+9      14084937        .       C       T       .       PASS    AA=C;DP=79      GT:GQ:DP        0|1:100:10      0|0:59:18       0|0:100:50
+13     86410215        rs9556276       G       T       .       PASS    AA=G;DP=77      GT:GQ:DP        0|1:100:10      0|0:62:19       0|0:100:48
+3      145552346       .       T       C       .       PASS    AA=T;DP=82      GT:GQ:DP        0|1:100:10      0|0:62:19       0|0:100:51
+15     35711805        .       G       C       .       PASS    AA=G;DP=80      GT:GQ:DP        0|1:100:10      0|0:62:19       0|0:100:52
+4      29723116        rs2310132       C       A       .       PASS    AA=C;DP=72      GT:GQ:DP        0|1:100:10      0|0:68:21       0|0:90:30
+2      116181535       rs6744360       C       A       .       PASS    AA=A;DP=63      GT:GQ:DP        0|1:100:11      0|0:35:20       0|0:72:24
+5      117025695       .       A       C       .       PASS    AA=A;DP=88      GT:GQ:DP        0|1:100:11      0|0:38:22       0|0:100:56
+4      13026208        .       A       G       .       PASS    AA=G;DP=62      GT:GQ:DP        0|1:100:11      0|0:41:13       0|0:68:30
+11     106321173       rs12574006      C       T       .       PASS    AA=C;DP=68      GT:GQ:DP        0|1:100:11      0|0:44:13       0|0:100:43
+3      144141053       .       T       C       .       PASS    AA=T;DP=73      GT:GQ:DP        0|1:100:11      0|0:44:13       0|0:100:49
+5      59423235        rs860374        T       G       .       PASS    AA=N;DP=78      GT:GQ:DP        0|1:100:11      0|0:44:13       0|0:100:54
+4      32105000        rs58134713      G       A       .       PASS    AA=G;DP=83      GT:GQ:DP        0|1:100:11      0|0:50:15       0|0:100:56
+6      77664573        rs5012256       G       A       .       PASS    AA=G;DP=78      GT:GQ:DP        0|1:100:11      0|0:53:16       0|0:100:49
+9      25969848        rs10738739      C       G       .       PASS    AA=c;DP=83      GT:GQ:DP        0|1:100:11      0|0:53:17       0|0:100:55
+1      106718691       rs60677591      G       A       .       PASS    AA=G;DP=101     GT:GQ:DP        0|1:100:11      0|0:53:17       0|0:100:65
+10     53698830        .       A       T       .       PASS    AA=A;DP=78      GT:GQ:DP        0|1:100:11      0|0:59:18       0|0:100:39
+6      125190692       rs9491245       A       T       .       PASS    AA=T;DP=70      GT:GQ:DP        0|1:100:11      0|0:59:18       0|0:90:30
+1      73860343        rs10890060      A       G       .       PASS    AA=G;DP=83;HM2  GT:GQ:DP        0|1:100:11      0|0:59:19       0|0:100:52
+10     122455494       rs2901250       A       G       .       PASS    AA=A;DP=75      GT:GQ:DP        0|1:100:11      0|0:59:20       0|0:100:43
+11     90013481        rs541304        C       T       .       PASS    AA=T;DP=83      GT:GQ:DP        0|1:100:11      0|0:71:24       0|0:100:49
+6      103623771       rs7757538       T       A       .       PASS    AA=t;DP=76      GT:GQ:DP        0|1:100:11      0|1:62:12       0|0:100:51
+18     39104803        .       T       C       .       PASS    AA=T;DP=83      GT:GQ:DP        0|1:100:12      0|0:50:15       0|0:100:58
+12     58442822        rs34860779      C       T       .       PASS    AA=T;DP=85      GT:GQ:DP        0|1:100:12      0|0:50:15       0|0:100:59
+18     31442125        .       A       G       .       PASS    AA=A;DP=87      GT:GQ:DP        0|1:100:12      0|0:50:15       0|0:100:61
+1      79223670        rs7527882       A       G       .       PASS    AA=A;DP=65;HM2  GT:GQ:DP        0|1:100:12      0|0:50:17       0|0:81:27
+5      24009074        rs61032782      A       C       .       PASS    AA=A;DP=79      GT:GQ:DP        0|1:100:12      0|0:59:18       0|0:100:49
+2      52067023        .       C       T       .       PASS    AA=C;DP=83      GT:GQ:DP        0|1:100:12      0|0:59:22       0|0:99:37
+9      39132011        rs11793011      A       G       .       PASS    AA=g;DP=81      GT:GQ:DP        0|1:100:12      0|0:71:22       0|0:100:39
+5      62395567        rs7719444       A       G       .       PASS    AA=A;DP=109     GT:GQ:DP        0|1:100:12      0|0:71:23       0|0:100:34
+9      11802558        .       G       A       .       PASS    AA=G;DP=106     GT:GQ:DP        0|1:100:12      0|0:77:26       0|0:100:66
+8      88024397        rs2336867       A       T       .       PASS    AA=A;DP=64      GT:GQ:DP        0|1:100:12      0|1:48:15       0|0:96:37
+11     37627094        rs1563991       G       T       .       PASS    AA=T;DP=75      GT:GQ:DP        0|1:100:12      0|1:65:16       0|0:100:50
+6      95148758        rs16872819      T       C       .       PASS    AA=T;DP=112     GT:GQ:DP        0|1:100:13      0|0:100:32      0|0:100:66
+22     31616798        rs62234169      G       T       .       PASS    AA=G;DP=75      GT:GQ:DP        0|1:100:13      0|0:15:8        0|0:56:52
+3      177385720       .       A       T       .       PASS    AA=A;DP=70      GT:GQ:DP        0|1:100:13      0|0:32:9        0|0:100:49
+4      92903758        .       T       C       .       PASS    AA=T;DP=76      GT:GQ:DP        0|1:100:13      0|0:35:16       0|0:99:33
+8      63572251        .       G       A       .       PASS    AA=G;DP=73      GT:GQ:DP        0|1:100:13      0|0:47:15       0|0:100:43
+7      13929684        rs2282876       G       A       .       PASS    AA=A;DP=80      GT:GQ:DP        0|1:100:13      0|0:53:16       0|0:100:52
+7      53325008        rs28696313      T       C       .       PASS    AA=T;DP=59      GT:GQ:DP        0|1:100:13      0|0:53:16       0|0:72:24
+13     74067493        .       T       C       .       PASS    AA=T;DP=79      GT:GQ:DP        0|1:100:13      0|0:53:17       0|0:100:50
+20     43706358        rs2425734       C       T       .       PASS    AA=T;DP=114     GT:GQ:DP        0|1:100:13      0|0:54:21       0|0:100:80
+14     48117818        .       A       T       .       PASS    AA=A;DP=113     GT:GQ:DP        0|1:100:13      0|0:57:23       0|0:100:78
+1      150582056       .       C       T       .       PASS    AA=C;DP=78      GT:GQ:DP        0|1:100:13      0|0:59:19       0|0:100:46
+21     21999828        rs9985019       A       G       .       PASS    AA=A;DP=93      GT:GQ:DP        0|1:100:13      0|0:5:11        0|0:100:70
+13     66263769        .       T       C       .       PASS    AA=T;DP=81      GT:GQ:DP        0|1:100:13      0|0:62:20       0|0:100:47
+2      14929875        .       C       T       .       PASS    AA=T;DP=98      GT:GQ:DP        0|1:100:13      0|0:62:20       0|0:100:66
+21     25199083        .       A       G       .       PASS    AA=A;DP=87      GT:GQ:DP        0|1:100:13      0|0:68:21       0|0:100:55
+11     98345474        .       T       G       .       PASS    AA=T;DP=97      GT:GQ:DP        0|1:100:13      0|0:71:22       0|0:100:58
+6      86303428        rs12193777      C       A       .       PASS    AA=C;DP=73      GT:GQ:DP        0|1:100:13      0|0:75:24       0|0:77:36
+15     85016445        rs12905245      G       A       .       PASS    AA=A;DP=106     GT:GQ:DP        0|1:100:13      0|0:77:24       0|0:100:69
+8      77696832        .       C       A       .       PASS    AA=C;DP=95      GT:GQ:DP        0|1:100:13      0|1:58:22       0|0:100:64
+4      61429849        rs1840474       A       T       .       PASS    AA=T;DP=90      GT:GQ:DP        0|1:100:13      1|1:51:24       0|1:100:53
+4      98361248        rs6532664       G       C       .       PASS    AA=C;DP=79      GT:GQ:DP        0|1:100:13      1|1:54:19       0|1:100:46
+11     41274909        rs2958863       G       C       .       PASS    AA=C;DP=102     GT:GQ:DP        0|1:100:13      1|1:69:24       0|1:100:64
+1      68685525        rs3118423       T       G       .       PASS    AA=G;DP=91      GT:GQ:DP        0|1:100:13      1|1:75:27       0|1:100:52
+10     117060495       .       G       A       .       PASS    AA=G;DP=115     GT:GQ:DP        0|1:100:14      0|0:29:19       0|0:100:39
+11     1177336 rs28514396      T       C       .       PASS    AA=.;DP=91      GT:GQ:DP        0|1:100:14      0|0:35:10       0|0:100:68
+3      69302330        .       C       T       .       PASS    AA=C;DP=74      GT:GQ:DP        0|1:100:14      0|0:35:11       0|0:100:49
+6      8976300 rs9505592       C       T       .       PASS    AA=T;DP=101     GT:GQ:DP        0|1:100:14      0|0:37:18       0|0:78:26
+6      77638142        rs9443303       T       A       .       PASS    AA=A;DP=85      GT:GQ:DP        0|1:100:14      0|0:38:11       0|0:100:47
+3      192304080       .       C       T       .       PASS    AA=C;DP=82      GT:GQ:DP        0|1:100:14      0|0:38:11       0|0:100:55
+19     49470639        rs2884016       G       A       .       PASS    AA=G;DP=62      GT:GQ:DP        0|1:100:14      0|0:38:12       0|0:90:32
+2      105258808       .       T       A       .       PASS    AA=T;DP=82      GT:GQ:DP        0|1:100:14      0|0:38:21       0|0:100:46
+9      22893709        rs10811796      G       A       .       PASS    AA=G;DP=80      GT:GQ:DP        0|1:100:14      0|0:41:13       0|0:100:54
+7      33602889        rs17170308      G       C       .       PASS    AA=G;DP=110     GT:GQ:DP        0|1:100:14      0|0:41:23       0|0:100:34
+6      78558949        rs57134247      G       A       .       PASS    AA=G;DP=71      GT:GQ:DP        0|1:100:14      0|0:44:13       0|0:100:44
+15     82070807        rs8037453       T       G       .       PASS    AA=T;DP=63      GT:GQ:DP        0|1:100:14      0|0:44:13       0|0:72:24
+7      121967140       .       C       A       .       PASS    AA=C;DP=64      GT:GQ:DP        0|1:100:14      0|0:44:13       0|0:90:30
+12     71415517        rs60911726      G       A       .       PASS    AA=G;DP=79      GT:GQ:DP        0|1:100:14      0|0:44:15       0|0:100:50
+5      73261385        .       A       G       .       PASS    AA=A;DP=95      GT:GQ:DP        0|1:100:14      0|0:45:19       0|0:100:62
+13     85595935        rs7334058       T       C       .       PASS    AA=C;DP=84      GT:GQ:DP        0|1:100:14      0|0:47:14       0|0:100:41
+21     23900444        rs10451749      A       G       .       PASS    AA=A;DP=88      GT:GQ:DP        0|1:100:14      0|0:47:14       0|0:100:49
+5      28163228        rs11951142      T       A       .       PASS    AA=T;DP=72      GT:GQ:DP        0|1:100:14      0|0:47:14       0|0:93:31
+6      1343267 rs9378619       C       T       .       PASS    AA=C;DP=85      GT:GQ:DP        0|1:100:14      0|0:50:16       0|0:100:53
+10     117521974       .       G       T       .       PASS    AA=G;DP=81      GT:GQ:DP        0|1:100:14      0|0:56:19       0|0:100:48
+10     52241434        .       G       C       .       PASS    AA=G;DP=99      GT:GQ:DP        0|1:100:14      0|0:59:18       0|0:100:70
+5      94786565        rs6556867       A       G       .       PASS    AA=A;DP=79      GT:GQ:DP        0|1:100:14      0|0:62:20       0|0:96:32
+2      141837250       .       C       A       .       PASS    AA=C;DP=118     GT:GQ:DP        0|1:100:14      0|0:67:26       0|0:100:38
+16     78513012        .       T       G       .       PASS    AA=T;DP=81      GT:GQ:DP        0|1:100:14      0|0:68:21       0|0:100:44
+13     63855999        rs11838455      A       G       .       PASS    AA=A;DP=94      GT:GQ:DP        0|1:100:14      0|0:68:21       0|0:100:61
+3      2532764 rs9838583       C       T       .       PASS    AA=C;DP=91      GT:GQ:DP        0|1:100:14      0|0:71:22       0|0:100:54
+19     57441306        rs16983643      G       C       .       PASS    AA=G;DP=108     GT:GQ:DP        0|1:100:14      0|0:71:22       0|0:100:69
+18     62828004        .       A       G       .       PASS    AA=A;DP=91      GT:GQ:DP        0|1:100:14      0|0:74:23       0|0:100:59
+6      110672004       .       C       T       .       PASS    AA=c;DP=102     GT:GQ:DP        0|1:100:14      0|0:74:26       0|0:100:63
+18     69231553        rs17087511      A       T       .       PASS    AA=A;DP=98      GT:GQ:DP        0|1:100:14      0|0:77:26       0|0:100:57
+2      46759028        rs9653520       T       C       .       PASS    AA=T;DP=120     GT:GQ:DP        0|1:100:14      0|0:80:27       0|0:100:36
+7      145195228       .       G       A       .       PASS    AA=G;DP=102     GT:GQ:DP        0|1:100:14      0|0:83:26       0|0:100:65
+11     100828343       rs7931399       A       C       .       PASS    AA=C;DP=131     GT:GQ:DP        0|1:100:14      0|0:83:26       0|0:100:88
+5      53414982        .       T       A       .       PASS    AA=T;DP=86      GT:GQ:DP        0|1:100:14      0|0:92:29       0|0:100:42
+7      19022965        .       G       A       .       PASS    AA=G;DP=112     GT:GQ:DP        0|1:100:14      0|0:92:30       0|0:100:69
+1      192377583       rs2506068       A       C       .       PASS    AA=C;DP=94;HM2  GT:GQ:DP        0|1:100:14      0|1:100:26      0|0:100:54
+11     82034147        rs1939619       C       T       .       PASS    AA=T;DP=99      GT:GQ:DP        0|1:100:14      0|1:25:19       0|0:100:65
+4      171685646       .       T       A       .       PASS    AA=T;DP=85      GT:GQ:DP        0|1:100:14      0|1:33:20       0|0:100:49
+18     61521582        rs17075150      G       T       .       PASS    AA=G;DP=87      GT:GQ:DP        0|1:100:14      0|1:87:17       0|0:100:56
+14     106266522       rs6576233       G       A       .       PASS    AA=.;DP=118     GT:GQ:DP        0|1:100:14      0|1:94:18       0|0:100:40
+1      190947992       rs16834688      C       T       .       PASS    AA=C;DP=92;HM2  GT:GQ:DP        0|1:100:14      0|1:96:16       0|0:100:65
+3      80815579        rs502325        T       G       .       PASS    AA=T;DP=75      GT:GQ:DP        0|1:100:14      1|1:33:12       0|1:100:49
+8      106867980       rs7822065       G       C       .       PASS    AA=G;DP=107     GT:GQ:DP        0|1:100:14      1|1:36:19       0|1:100:71
+9      9001209 rs7046257       A       G       .       PASS    AA=G;DP=79      GT:GQ:DP        0|1:100:14      1|1:45:16       0|1:100:51
+4      80862361        rs4975115       A       G       .       PASS    AA=G;DP=71      GT:GQ:DP        0|1:100:14      1|1:60:21       0|1:100:36
+4      90088355        rs2869967       T       C       .       PASS    AA=C;DP=110     GT:GQ:DP        0|1:100:15      0|0:100:33      0|0:100:61
+19     47119639        .       C       A       .       PASS    AA=C;DP=88      GT:GQ:DP        0|1:100:15      0|0:14:9        0|0:100:64
+8      112149128       rs55976205      C       T       .       PASS    AA=C;DP=87      GT:GQ:DP        0|1:100:15      0|0:27:12       0|0:100:57
+11     63510591        rs61653882      C       T       .       PASS    AA=c;DP=71      GT:GQ:DP        0|1:100:15      0|0:29:8        0|0:100:39
+1      215201488       rs1436887       A       G       .       PASS    AA=C;DP=102     GT:GQ:DP        0|1:100:15      0|0:32:9        0|0:100:37
+11     91225740        .       A       G       .       PASS    AA=G;DP=72      GT:GQ:DP        0|1:100:15      0|0:35:10       0|0:100:48
+6      139649466       rs55882009      G       A       .       PASS    AA=G;DP=80      GT:GQ:DP        0|1:100:15      0|0:38:11       0|0:100:54
+9      72668969        rs7873917       G       A       .       PASS    AA=G;DP=76      GT:GQ:DP        0|1:100:15      0|0:39:15       0|0:100:44
+3      3113085 rs163559        G       C       .       PASS    AA=G;DP=104     GT:GQ:DP        0|1:100:15      0|0:44:13       0|0:100:35
+2      196150663       rs7566549       G       T       .       PASS    AA=G;DP=82      GT:GQ:DP        0|1:100:15      0|0:47:14       0|0:100:54
+2      125617887       rs7566197       G       T       .       PASS    AA=G;DP=76      GT:GQ:DP        0|1:100:15      0|0:47:14       0|0:99:33
+9      113562815       rs10981057      T       C       .       PASS    AA=T;DP=78      GT:GQ:DP        0|1:100:15      0|0:50:15       0|0:100:51
+3      9004509 .       C       A       .       PASS    AA=C;DP=79      GT:GQ:DP        0|1:100:15      0|0:50:15       0|0:100:52
+8      40356279        rs2235101       G       A       .       PASS    AA=A;DP=98      GT:GQ:DP        0|1:100:15      0|0:50:15       0|0:100:69
+9      32788988        .       C       A       .       PASS    AA=C;DP=102     GT:GQ:DP        0|1:100:15      0|0:50:15       0|0:100:74
+22     17579326        rs5748043       T       C       .       PASS    AA=T;DP=91      GT:GQ:DP        0|1:100:15      0|0:50:16       0|0:100:61
+2      211763908       .       C       T       .       PASS    AA=C;DP=89      GT:GQ:DP        0|1:100:15      0|0:52:22       0|0:100:56
+17     60832455        rs1014142       T       C       .       PASS    AA=T;DP=88      GT:GQ:DP        0|1:100:15      0|0:53:16       0|0:100:51
+1      188978122       rs16832702      T       A       .       PASS    AA=T;DP=84;HM2  GT:GQ:DP        0|1:100:15      0|0:53:16       0|0:100:55
+20     4118908 rs1217359       T       G       .       PASS    AA=N;DP=104     GT:GQ:DP        0|1:100:15      0|0:53:16       0|0:100:74
+6      55436189        .       A       C       .       PASS    AA=A;DP=75      GT:GQ:DP        0|1:100:15      0|0:53:18       0|0:100:45
+3      163622678       rs13071745      A       G       .       PASS    AA=A;DP=76      GT:GQ:DP        0|1:100:15      0|0:56:17       0|0:100:44
+5      97963034        rs17132943      G       A       .       PASS    AA=G;DP=81      GT:GQ:DP        0|1:100:15      0|0:56:17       0|0:100:51
+2      189709337       .       T       C       .       PASS    AA=T;DP=64      GT:GQ:DP        0|1:100:15      0|0:56:17       0|0:72:24
+2      140616919       .       A       T       .       PASS    AA=A;DP=83      GT:GQ:DP        0|1:100:15      0|0:59:18       0|0:100:51
+7      53919077        .       G       A       .       PASS    AA=g;DP=93      GT:GQ:DP        0|1:100:15      0|0:59:18       0|0:100:62
+4      88378739        rs7668285       G       A       .       PASS    AA=G;DP=66      GT:GQ:DP        0|1:100:15      0|0:59:18       0|0:81:27
+10     29495423        .       G       C       .       PASS    AA=G;DP=70      GT:GQ:DP        0|1:100:15      0|0:59:19       0|0:100:36
+5      6986689 rs7729445       C       T       .       PASS    AA=C;DP=88      GT:GQ:DP        0|1:100:15      0|0:59:19       0|0:100:52
+21     21521394        rs13047738      A       G       .       PASS    AA=A;DP=76      GT:GQ:DP        0|1:100:15      0|0:62:19       0|0:100:38
+1      193180370       rs339596        A       T       .       PASS    AA=A;DP=93;HM2  GT:GQ:DP        0|1:100:15      0|0:62:19       0|0:100:60
+7      81768183        .       T       C       .       PASS    AA=T;DP=110     GT:GQ:DP        0|1:100:15      0|0:62:19       0|0:93:31
+2      165852884       rs1838848       C       A       .       PASS    AA=C;DP=115     GT:GQ:DP        0|1:100:15      0|0:62:20       0|0:100:38
+1      171688987       .       G       A       .       PASS    AA=G;DP=91      GT:GQ:DP        0|1:100:15      0|0:62:23       0|0:100:53
+20     22082021        rs6113545       T       C       .       PASS    AA=T;DP=77      GT:GQ:DP        0|1:100:15      0|0:65:20       0|0:100:41
+4      179453265       rs17065792      T       G       .       PASS    AA=T;DP=111     GT:GQ:DP        0|1:100:15      0|0:65:20       0|0:93:31
+4      79090193        .       G       T       .       PASS    AA=G;DP=80      GT:GQ:DP        0|1:100:15      0|0:65:21       0|0:100:43
+1      162636223       rs2635003       C       G       .       PASS    AA=C;DP=99;HM2  GT:GQ:DP        0|1:100:15      0|0:65:22       0|0:100:59
+5      165898847       rs59244145      T       C       .       PASS    AA=T;DP=88      GT:GQ:DP        0|1:100:15      0|0:68:21       0|0:100:53
+2      210715532       rs12612970      T       C       .       PASS    AA=T;DP=93      GT:GQ:DP        0|1:100:15      0|0:68:21       0|0:100:57
+8      25059100        .       C       G       .       PASS    AA=C;DP=97      GT:GQ:DP        0|1:100:15      0|0:68:21       0|0:100:64
+12     42174012        .       C       T       .       PASS    AA=C;DP=102     GT:GQ:DP        0|1:100:15      0|0:68:21       0|0:100:67
+4      164875169       .       C       A       .       PASS    AA=C;DP=77      GT:GQ:DP        0|1:100:15      0|0:68:21       0|0:96:33
+7      16555634        rs7807167       T       C       .       PASS    AA=T;DP=104     GT:GQ:DP        0|1:100:15      0|0:71:22       0|0:100:54
+6      144036835       rs6907410       A       G       .       PASS    AA=A;DP=131     GT:GQ:DP        0|1:100:15      0|0:71:24       0|0:84:28
+8      71762341        rs35544920      T       A       .       PASS    AA=T;DP=87      GT:GQ:DP        0|1:100:15      0|0:71:25       0|0:100:48
+2      201114974       rs842933        T       C       .       PASS    AA=T;DP=88      GT:GQ:DP        0|1:100:15      0|0:74:23       0|0:100:46
+9      89796509        rs12352451      T       A       .       PASS    AA=T;DP=101     GT:GQ:DP        0|1:100:15      0|0:74:23       0|0:100:64
+12     28429826        rs1257740       G       A       .       PASS    AA=A;DP=117     GT:GQ:DP        0|1:100:15      0|0:74:23       0|0:100:78
+17     64504311        .       T       G       .       PASS    AA=T;DP=76      GT:GQ:DP        0|1:100:15      0|0:74:23       0|0:93:31
+13     88594016        .       C       A       .       PASS    AA=C;DP=117     GT:GQ:DP        0|1:100:15      0|0:75:28       0|0:100:72
+19     20577660        rs17617651      T       C       .       PASS    AA=t;DP=99      GT:GQ:DP        0|1:100:15      0|0:77:24       0|0:100:61
+14     48295901        rs2585377       C       T       .       PASS    AA=c;DP=94      GT:GQ:DP        0|1:100:15      0|0:77:26       0|0:100:54
+9      131102298       rs7848014       A       C       .       PASS    AA=A;DP=98      GT:GQ:DP        0|1:100:15      0|0:83:27       0|0:100:56
+18     61347221        .       A       G       .       PASS    AA=A;DP=102     GT:GQ:DP        0|1:100:15      0|0:86:27       0|0:100:47
+14     88413379        .       T       C       .       PASS    AA=T;DP=103     GT:GQ:DP        0|1:100:15      0|0:86:27       0|0:100:60
+21     19866073        rs9974887       C       T       .       PASS    AA=T;DP=103     GT:GQ:DP        0|1:100:15      0|0:89:28       0|0:100:59
+7      78157497        .       G       A       .       PASS    AA=G;DP=108     GT:GQ:DP        0|1:100:15      0|0:89:30       0|0:100:51
+20     11383384        rs6108987       C       T       .       PASS    AA=C;DP=118     GT:GQ:DP        0|1:100:15      0|0:95:30       0|0:100:70
+7      134393978       .       T       C       .       PASS    AA=C;DP=104     GT:GQ:DP        0|1:100:15      0|1:100:17      0|0:100:74
+1      102634483       rs4908242       T       C       .       PASS    AA=t;DP=88;HM2  GT:GQ:DP        0|1:100:15      0|1:100:20      0|0:99:37
+4      17381161        .       G       T       .       PASS    AA=T;DP=103     GT:GQ:DP        0|1:100:15      0|1:37:15       0|0:100:77
+10     49454827        rs10776624      T       A       .       PASS    AA=t;DP=75      GT:GQ:DP        0|1:100:15      0|1:50:13       0|0:100:47
+4      70535419        rs6824954       T       C       .       PASS    AA=t;DP=88      GT:GQ:DP        0|1:100:15      0|1:67:16       0|0:100:55
+4      60984965        .       G       A       .       PASS    AA=g;DP=112     GT:GQ:DP        0|1:100:15      0|1:94:16       0|0:100:67
+8      4315814 rs12547327      G       A       .       PASS    AA=g;DP=64      GT:GQ:DP        0|1:100:15      1|1:33:12       0|1:100:25
+10     121793275       rs12767946      T       C       .       PASS    AA=C;DP=75      GT:GQ:DP        0|1:100:15      1|1:39:15       0|1:100:45
+4      20851741        rs10019782      A       G       .       PASS    AA=a;DP=88      GT:GQ:DP        0|1:100:15      1|1:45:16       0|1:100:55
+9      92205933        rs7854025       T       G       .       PASS    AA=T;DP=88      GT:GQ:DP        0|1:100:15      1|1:47:19       0|1:100:55
+2      99468194        rs4143760       C       A       .       PASS    AA=C;DP=79      GT:GQ:DP        0|1:100:15      1|1:57:20       0|1:100:43
+8      19486795        rs6586848       A       C       .       PASS    AA=C;DP=142     GT:GQ:DP        0|1:100:15      1|1:84:30       0|1:100:50
+2      154817025       rs13388978      A       C       .       PASS    AA=A;DP=79      GT:GQ:DP        0|1:100:16      0|0:10:9        0|0:100:54
+4      164216485       .       T       G       .       PASS    AA=T;DP=74      GT:GQ:DP        0|1:100:16      0|0:21:16       0|0:90:30
+7      53682976        rs34101595      G       T       .       PASS    AA=G;DP=69      GT:GQ:DP        0|1:100:16      0|0:23:14       0|0:100:36
+14     47831871        rs1660213       G       T       .       PASS    AA=N;DP=95      GT:GQ:DP        0|1:100:16      0|0:25:15       0|0:100:65
+4      125341192       .       C       A       .       PASS    AA=C;DP=74      GT:GQ:DP        0|1:100:16      0|0:26:13       0|0:100:46
+2      230121967       rs962126        G       A       .       PASS    AA=A;DP=88      GT:GQ:DP        0|1:100:16      0|0:27:13       0|0:100:59
+9      104965188       .       C       T       .       PASS    AA=C;DP=93      GT:GQ:DP        0|1:100:16      0|0:29:19       0|0:100:59
+13     56171948        .       T       G       .       PASS    AA=T;DP=95      GT:GQ:DP        0|1:100:16      0|0:29:19       0|0:100:61
+7      94671626        .       G       A       .       PASS    AA=G;DP=93      GT:GQ:DP        0|1:100:16      0|0:30:19       0|0:100:58
+12     131875488       .       C       T       .       PASS    AA=C;DP=58      GT:GQ:DP        0|1:100:16      0|0:32:9        0|0:72:24
+2      83894350        rs13403830      C       T       .       PASS    AA=T;DP=102     GT:GQ:DP        0|1:100:16      0|0:35:10       0|0:100:78
+3      60225515        rs213330        A       G       .       PASS    AA=A;DP=94      GT:GQ:DP        0|1:100:16      0|0:35:21       0|0:100:56
+6      897817  .       G       T       .       PASS    AA=G;DP=101     GT:GQ:DP        0|1:100:16      0|0:37:29       0|0:100:56
+1      79947615        rs11162800      A       G       .       PASS    AA=A;DP=86      GT:GQ:DP        0|1:100:16      0|0:44:13       0|0:100:55
+10     3642612 .       A       G       .       PASS    AA=A;DP=90      GT:GQ:DP        0|1:100:16      0|0:44:13       0|0:100:60
+11     67062083        rs12271715      G       T       .       PASS    AA=G;DP=92      GT:GQ:DP        0|1:100:16      0|0:44:13       0|0:100:64
+1      190347970       rs16834026      T       C       .       PASS    AA=T;DP=98;HM2;HM3      GT:GQ:DP        0|1:100:16      0|0:44:13       0|0:100:72
+1      79393565        rs1872860       A       T       .       PASS    AA=A;DP=65      GT:GQ:DP        0|1:100:16      0|0:44:13       0|0:90:30
+19     43959252        rs59724109      G       A       .       PASS    AA=g;DP=76      GT:GQ:DP        0|1:100:16      0|0:44:14       0|0:100:46
+6      97047733        .       T       C       .       PASS    AA=T;DP=65      GT:GQ:DP        0|1:100:16      0|0:44:14       0|0:84:28
+4      163420782       .       A       G       .       PASS    AA=a;DP=82      GT:GQ:DP        0|1:100:16      0|0:47:14       0|0:100:47
+18     11420078        rs9959329       G       A       .       PASS    AA=A;DP=89      GT:GQ:DP        0|1:100:16      0|0:47:14       0|0:100:57
+17     68589553        rs35080033      G       A       .       PASS    AA=G;DP=91      GT:GQ:DP        0|1:100:16      0|0:47:14       0|0:100:61
+9      96668732        .       T       C       .       PASS    AA=T;DP=101     GT:GQ:DP        0|1:100:16      0|0:47:14       0|0:100:68
+14     43487092        rs11157375      T       A       .       PASS    AA=T;DP=61      GT:GQ:DP        0|1:100:16      0|0:47:15       0|0:51:17
+15     52366458        .       T       C       .       PASS    AA=T;DP=79      GT:GQ:DP        0|1:100:16      0|0:50:15       0|0:100:46
+1      76940542        .       T       G       .       PASS    AA=T;DP=75      GT:GQ:DP        0|1:100:16      0|0:50:16       0|0:100:43
+2      59234775        rs9309310       G       C       .       PASS    AA=A;DP=81      GT:GQ:DP        0|1:100:16      0|0:50:16       0|0:100:45
+7      33254475        .       G       A       .       PASS    AA=G;DP=91      GT:GQ:DP        0|1:100:16      0|0:50:16       0|0:100:62
+2      180864277       rs2679329       T       A       .       PASS    AA=T;DP=85      GT:GQ:DP        0|1:100:16      0|0:50:17       0|0:100:47
+21     19274512        rs398936        A       G       .       PASS    AA=A;DP=77      GT:GQ:DP        0|1:100:16      0|0:50:17       0|0:100:47
+7      68295709        .       C       T       .       PASS    AA=C;DP=92      GT:GQ:DP        0|1:100:16      0|0:53:16       0|0:100:61
+3      34296139        .       A       T       .       PASS    AA=A;DP=77      GT:GQ:DP        0|1:100:16      0|0:53:16       0|0:99:34
+6      143809250       rs9496638       A       G       .       PASS    AA=G;DP=73      GT:GQ:DP        0|1:100:16      0|0:53:17       0|0:100:41
+19     22202655        rs55855208      G       T       .       PASS    AA=G;DP=93      GT:GQ:DP        0|1:100:16      0|0:53:18       0|0:100:48
+12     81406938        rs7975889       C       A       .       PASS    AA=A;DP=90      GT:GQ:DP        0|1:100:16      0|0:53:22       0|0:100:53
+13     60701521        rs9570539       C       T       .       PASS    AA=c;DP=81      GT:GQ:DP        0|1:100:16      0|0:56:17       0|0:100:50
+20     58925058        .       C       T       .       PASS    AA=C;DP=85      GT:GQ:DP        0|1:100:16      0|0:56:17       0|0:100:53
+14     52354370        rs2147977       G       A       .       PASS    AA=G;DP=100     GT:GQ:DP        0|1:100:16      0|0:56:17       0|0:100:63
+10     86647232        rs35138692      G       A       .       PASS    AA=A;DP=92      GT:GQ:DP        0|1:100:16      0|0:56:18       0|0:100:62
+6      133828263       .       G       A       .       PASS    AA=G;DP=86      GT:GQ:DP        0|1:100:16      0|0:56:19       0|0:100:51
+18     35714996        rs9951494       C       A       .       PASS    AA=C;DP=112     GT:GQ:DP        0|1:100:16      0|0:59:18       0|0:100:37
+1      65228779        .       G       A       .       PASS    AA=G;DP=101     GT:GQ:DP        0|1:100:16      0|0:59:18       0|0:100:69
+5      101891933       rs1502851       A       G       .       PASS    AA=G;DP=84      GT:GQ:DP        0|1:100:16      0|0:59:19       0|0:100:47
+5      105420681       .       C       G       .       PASS    AA=C;DP=102     GT:GQ:DP        0|1:100:16      0|0:59:19       0|0:100:65
+2      165543003       rs10169112      A       G       .       PASS    AA=A;DP=84      GT:GQ:DP        0|1:100:16      0|0:62:19       0|0:100:48
+7      114041781       rs2045296       T       C       .       PASS    AA=T;DP=85      GT:GQ:DP        0|1:100:16      0|0:62:19       0|0:100:51
+4      64955168        rs10009013      G       T       .       PASS    AA=G;DP=93      GT:GQ:DP        0|1:100:16      0|0:62:19       0|0:100:61
+4      90779552        rs16996194      C       A       .       PASS    AA=C;DP=79      GT:GQ:DP        0|1:100:16      0|0:62:19       0|0:93:31
+1      189833377       rs10920971      T       G       .       PASS    AA=T;DP=89;HM2  GT:GQ:DP        0|1:100:16      0|0:62:20       0|0:100:52
+6      69209469        rs7772021       G       A       .       PASS    AA=A;DP=91      GT:GQ:DP        0|1:100:16      0|0:62:21       0|0:100:50
+1      221192969       rs61840890      C       T       .       PASS    AA=C;DP=90      GT:GQ:DP        0|1:100:16      0|0:65:21       0|0:100:52
+20     41177018        rs16987777      A       G       .       PASS    AA=A;DP=82      GT:GQ:DP        0|1:100:16      0|0:68:21       0|0:100:44
+8      15882469        rs2898431       A       C       .       PASS    AA=A;DP=85      GT:GQ:DP        0|1:100:16      0|0:68:21       0|0:100:49
+3      56126152        rs7637114       G       C       .       PASS    AA=G;DP=106     GT:GQ:DP        0|1:100:16      0|0:68:21       0|0:100:72
+3      113140207       rs62277601      A       G       .       PASS    AA=A;DP=74      GT:GQ:DP        0|1:100:16      0|0:68:21       0|0:84:28
+2      22593442        rs6705838       C       T       .       PASS    AA=T;DP=92      GT:GQ:DP        0|1:100:16      0|0:71:23       0|0:100:55
+4      124405600       .       C       T       .       PASS    AA=C;DP=94      GT:GQ:DP        0|1:100:16      0|0:74:23       0|0:100:55
+13     82051841        rs9565796       C       T       .       PASS    AA=C;DP=96      GT:GQ:DP        0|1:100:16      0|0:74:23       0|0:100:56
+8      13395939        .       A       G       .       PASS    AA=A;DP=104     GT:GQ:DP        0|1:100:16      0|0:74:23       0|0:100:62
+3      165873266       rs28533828      C       T       .       PASS    AA=A;DP=106     GT:GQ:DP        0|1:100:16      0|0:74:26       0|0:100:65
+6      79108842        .       T       C       .       PASS    AA=T;DP=93      GT:GQ:DP        0|1:100:16      0|0:77:24       0|0:100:51
+3      176773653       rs62285564      G       C       .       PASS    AA=G;DP=84      GT:GQ:DP        0|1:100:16      0|0:83:26       0|0:100:42
+17     61648983        rs16958975      A       G       .       PASS    AA=A;DP=118     GT:GQ:DP        0|1:100:16      0|0:86:27       0|0:78:27
+12     81973567        rs3901353       A       G       .       PASS    AA=A;DP=115     GT:GQ:DP        0|1:100:16      0|0:86:29       0|0:100:71
+1      208207956       rs11119375      A       T       .       PASS    AA=a;DP=72;HM2  GT:GQ:DP        0|1:100:16      0|0:89:28       0|0:37:24
+4      53040421        rs6554552       C       T       .       PASS    AA=C;DP=122     GT:GQ:DP        0|1:100:16      0|0:95:30       0|0:100:75
+2      141464987       rs12052741      G       C       .       PASS    AA=G;DP=83      GT:GQ:DP        0|1:100:16      0|1:100:16      0|0:100:45
+4      31983240        rs59821507      C       T       .       PASS    AA=C;DP=88      GT:GQ:DP        0|1:100:16      0|1:100:16      0|0:100:56
+8      120160008       rs2465403       G       A       .       PASS    AA=G;DP=105     GT:GQ:DP        0|1:100:16      0|1:100:18      0|0:100:71
+5      7563391 rs1995276       C       T       .       PASS    AA=C;DP=109     GT:GQ:DP        0|1:100:16      0|1:100:19      0|0:100:72
+5      97090273        rs12651959      A       T       .       PASS    AA=A;DP=84      GT:GQ:DP        0|1:100:16      0|1:100:20      0|0:100:48
+5      144748215       rs32194 A       T       .       PASS    AA=A;DP=88      GT:GQ:DP        0|1:100:16      0|1:100:22      0|0:100:35
+4      93686305        rs7700132       A       T       .       PASS    AA=A;DP=87      GT:GQ:DP        0|1:100:16      0|1:100:23      0|0:100:47
+4      18660717        .       A       T       .       PASS    AA=A;DP=70      GT:GQ:DP        0|1:100:16      0|1:100:8       0|0:100:47
+11     103900045       rs2029286       A       G       .       PASS    AA=A;DP=72      GT:GQ:DP        0|1:100:16      0|1:13:15       0|0:100:39
+4      155860250       rs7671848       C       T       .       PASS    AA=C;DP=102     GT:GQ:DP        0|1:100:16      0|1:61:19       0|0:100:68
+5      99299891        rs10074732      G       A       .       PASS    AA=G;DP=68      GT:GQ:DP        0|1:100:16      0|1:75:11       0|0:100:41
+13     19848626        rs6490559       G       A       .       PASS    AA=-;DP=104     GT:GQ:DP        0|1:100:16      0|1:91:22       0|0:100:66
+2      149959181       rs1196689       A       T       .       PASS    AA=T;DP=76      GT:GQ:DP        0|1:100:16      1|1:30:11       0|1:100:50
+4      150623522       rs4835585       G       A       .       PASS    AA=G;DP=82      GT:GQ:DP        0|1:100:16      1|1:30:11       0|1:100:55
+8      69473415        rs1517119       G       T       .       PASS    AA=-;DP=80      GT:GQ:DP        0|1:100:16      1|1:45:16       0|1:100:50
+2      77389946        rs13422362      C       T       .       PASS    AA=T;DP=103     GT:GQ:DP        0|1:100:16      1|1:45:16       0|1:100:66
+7      43382654        rs7811003       A       G       .       PASS    AA=A;DP=115     GT:GQ:DP        0|1:100:16      1|1:51:19       0|1:100:80
+9      12015925        rs10756315      T       A       .       PASS    AA=a;DP=70      GT:GQ:DP        0|1:100:16      1|1:54:19       0|1:100:36
+10     55872587        rs1774661       A       T       .       PASS    AA=T;DP=99      GT:GQ:DP        0|1:100:16      1|1:69:24       0|1:100:60
+7      49977018        rs12540153      C       T       .       PASS    AA=T;DP=117     GT:GQ:DP        0|1:100:16      1|1:72:25       0|1:100:72
+21     24732042        rs1014545       G       A       .       PASS    AA=G;DP=112     GT:GQ:DP        0|1:100:16      1|1:75:26       0|1:100:56
+6      55373648        rs6920497       G       A       .       PASS    AA=A;DP=94      GT:GQ:DP        0|1:100:16      1|1:84:30       0|1:100:48
+4      58903726        rs11732019      A       C       .       PASS    AA=C;DP=87      GT:GQ:DP        0|1:100:16      1|1:9:18        0|1:100:54
+10     62054458        .       G       A       .       PASS    AA=G;DP=128     GT:GQ:DP        0|1:100:17      0|0:100:34      0|0:100:79
+2      147354690       .       C       T       .       PASS    AA=T;DP=126     GT:GQ:DP        0|1:100:17      0|0:100:42      0|0:100:68
+5      1935280 rs2232373       C       G       .       PASS    AA=N;DP=53      GT:GQ:DP        0|1:100:17      0|0:20:5        0|0:78:26
+5      82862683        rs310512        C       A       .       PASS    AA=A;DP=99      GT:GQ:DP        0|1:100:17      0|0:25:15       0|0:100:71
+13     103527346       rs60185375      T       A       .       PASS    AA=T;DP=90      GT:GQ:DP        0|1:100:17      0|0:26:7        0|0:100:66
+11     99137031        rs1219048       C       T       .       PASS    AA=T;DP=90      GT:GQ:DP        0|1:100:17      0|0:27:16       0|0:100:56
+1      155741625       rs6669676       T       C       .       PASS    AA=T;DP=89      GT:GQ:DP        0|1:100:17      0|0:29:19       0|0:100:54
+15     97629669        rs28622927      T       C       .       PASS    AA=T;DP=88      GT:GQ:DP        0|1:100:17      0|0:29:8        0|0:100:63
+6      92868757        .       A       C       .       PASS    AA=A;DP=101     GT:GQ:DP        0|1:100:17      0|0:30:19       0|0:100:62
+16     68706071        .       C       T       .       PASS    AA=.;DP=78      GT:GQ:DP        0|1:100:17      0|0:32:9        0|0:100:39
+8      85555786        rs28580195      T       C       .       PASS    AA=T;DP=79      GT:GQ:DP        0|1:100:17      0|0:35:10       0|0:100:50
+7      35920848        rs34676414      T       C       .       PASS    AA=t;DP=80      GT:GQ:DP        0|1:100:17      0|0:38:11       0|0:100:42
+3      170392853       rs2220391       A       G       .       PASS    AA=A;DP=74      GT:GQ:DP        0|1:100:17      0|0:38:11       0|0:100:47
+19     42774225        rs12162238      A       T       .       PASS    AA=A;DP=89      GT:GQ:DP        0|1:100:17      0|0:38:11       0|0:100:60
+5      106212481       rs1500268       G       A       .       PASS    AA=G;DP=88      GT:GQ:DP        0|1:100:17      0|0:38:11       0|0:100:60
+4      88774882        rs2627658       C       G       .       PASS    AA=T;DP=93      GT:GQ:DP        0|1:100:17      0|0:38:11       0|0:100:66
+2      31302020        .       G       A       .       PASS    AA=G;DP=76      GT:GQ:DP        0|1:100:17      0|0:38:12       0|0:100:48
+5      115540268       rs4563665       G       A       .       PASS    AA=G;DP=76      GT:GQ:DP        0|1:100:17      0|0:38:12       0|0:100:48
+9      774198  .       C       T       .       PASS    AA=c;DP=91      GT:GQ:DP        0|1:100:17      0|0:38:13       0|0:100:62
+7      12122321        rs17165590      C       T       .       PASS    AA=C;DP=90      GT:GQ:DP        0|1:100:17      0|0:41:18       0|0:100:59
+6      147431403       .       C       A       .       PASS    AA=C;DP=110     GT:GQ:DP        0|1:100:17      0|0:42:28       0|0:100:64
+11     59363832        rs58902054      A       C       .       PASS    AA=A;DP=112     GT:GQ:DP        0|1:100:17      0|0:43:24       0|0:100:66
+18     43030112        .       T       G       .       PASS    AA=T;DP=81      GT:GQ:DP        0|1:100:17      0|0:44:13       0|0:100:52
+16     71488131        rs8063724       G       A       .       PASS    AA=G;DP=82      GT:GQ:DP        0|1:100:17      0|0:44:14       0|0:100:41
+6      142306226       rs9399389       A       G       .       PASS    AA=A;DP=92      GT:GQ:DP        0|1:100:17      0|0:44:14       0|0:100:62
+18     4653521 .       C       A       .       PASS    AA=C;DP=100     GT:GQ:DP        0|1:100:17      0|0:45:21       0|0:100:65
+21     23871671        rs2828277       T       G       .       PASS    AA=G;DP=57      GT:GQ:DP        0|1:100:17      0|0:47:14       0|0:63:21
+16     1857561 .       G       A       .       PASS    AA=g;DP=80      GT:GQ:DP        0|1:100:17      0|0:47:15       0|0:100:50
+13     83542555        rs4520731       G       A       .       PASS    AA=G;DP=110     GT:GQ:DP        0|1:100:17      0|0:47:15       0|0:100:64
+9      22938155        .       A       G       .       PASS    AA=A;DP=94      GT:GQ:DP        0|1:100:17      0|0:47:16       0|0:100:58
+7      51234081        rs58618467      G       T       .       PASS    AA=g;DP=123     GT:GQ:DP        0|1:100:17      0|0:48:24       0|0:100:88
+21     27556800        .       A       C       .       PASS    AA=A;DP=124     GT:GQ:DP        0|1:100:17      0|0:49:28       0|0:100:78
+7      143909458       rs6976709       T       G       .       PASS    AA=G;DP=78      GT:GQ:DP        0|1:100:17      0|0:50:15       0|0:100:46
+8      144792883       rs12682415      G       A       .       PASS    AA=G;DP=84      GT:GQ:DP        0|1:100:17      0|0:50:15       0|0:100:51
+8      14839344        .       T       C       .       PASS    AA=T;DP=84      GT:GQ:DP        0|1:100:17      0|0:50:15       0|0:100:51
+5      163115232       .       T       C       .       PASS    AA=T;DP=96      GT:GQ:DP        0|1:100:17      0|0:50:15       0|0:100:65
+14     37092103        .       G       C       .       PASS    AA=C;DP=78      GT:GQ:DP        0|1:100:17      0|0:50:16       0|0:100:46
+4      138485825       .       C       T       .       PASS    AA=C;DP=79      GT:GQ:DP        0|1:100:17      0|0:50:16       0|0:100:50
+8      50569561        rs1674252       A       G       .       PASS    AA=.;DP=93      GT:GQ:DP        0|1:100:17      0|0:50:16       0|0:100:51
+9      14903642        .       C       T       .       PASS    AA=C;DP=84      GT:GQ:DP        0|1:100:17      0|0:50:17       0|0:100:50
+5      97026690        .       G       A       .       PASS    AA=g;DP=96      GT:GQ:DP        0|1:100:17      0|0:53:16       0|0:100:65
+17     30100956        .       C       T       .       PASS    AA=C;DP=100     GT:GQ:DP        0|1:100:17      0|0:53:16       0|0:100:68
+6      125301759       .       G       A       .       PASS    AA=G;DP=105     GT:GQ:DP        0|1:100:17      0|0:53:16       0|0:100:69
+5      25656975        rs10942130      A       G       .       PASS    AA=A;DP=62      GT:GQ:DP        0|1:100:17      0|0:53:16       0|0:72:24
+7      156229810       .       T       C       .       PASS    AA=T;DP=91      GT:GQ:DP        0|1:100:17      0|0:53:17       0|0:100:54
+16     5878862 rs12325596      C       T       .       PASS    AA=T;DP=108     GT:GQ:DP        0|1:100:17      0|0:53:18       0|0:100:73
+2      59730122        rs1558555       T       G       .       PASS    AA=T;DP=134     GT:GQ:DP        0|1:100:17      0|0:54:22       0|0:100:49
+12     67866929        .       G       A       .       PASS    AA=G;DP=120     GT:GQ:DP        0|1:100:17      0|0:55:24       0|0:87:31
+14     83386904        rs1028976       T       A       .       PASS    AA=A;DP=82      GT:GQ:DP        0|1:100:17      0|0:56:17       0|0:100:48
+12     14229363        .       G       A       .       PASS    AA=G;DP=95      GT:GQ:DP        0|1:100:17      0|0:56:17       0|0:100:60
+20     38929150        rs62208617      G       C       .       PASS    AA=G;DP=75      GT:GQ:DP        0|1:100:17      0|0:56:17       0|0:81:27
+3      170724335       rs4350951       G       A       .       PASS    AA=G;DP=89      GT:GQ:DP        0|1:100:17      0|0:56:18       0|0:100:52
+7      147080549       rs12155395      G       C       .       PASS    AA=G;DP=113     GT:GQ:DP        0|1:100:17      0|0:56:18       0|0:100:78
+4      31559210        rs10026294      C       T       .       PASS    AA=C;DP=80      GT:GQ:DP        0|1:100:17      0|0:57:23       0|0:100:41
+9      5452082 rs10975124      A       G       .       PASS    AA=A;DP=82      GT:GQ:DP        0|1:100:17      0|0:59:18       0|0:100:46
+2      200442354       rs13382221      T       C       .       PASS    AA=T;DP=92      GT:GQ:DP        0|1:100:17      0|0:59:18       0|0:100:58
+7      88187499        .       C       A       .       PASS    AA=C;DP=94      GT:GQ:DP        0|1:100:17      0|0:59:18       0|0:100:58
+1      63370853        .       A       G       .       PASS    AA=A;DP=107     GT:GQ:DP        0|1:100:17      0|0:59:18       0|0:96:32
+2      183880844       .       A       T       .       PASS    AA=A;DP=106     GT:GQ:DP        0|1:100:17      0|0:59:19       0|0:100:66
+9      381347  rs16937634      G       A       .       PASS    AA=A;DP=106     GT:GQ:DP        0|1:100:17      0|0:59:19       0|0:84:29
+5      139811077       .       C       T       .       PASS    AA=T;DP=72      GT:GQ:DP        0|1:100:17      0|0:59:20       0|0:72:25
+6      79306175        .       A       T       .       PASS    AA=A;DP=73      GT:GQ:DP        0|1:100:17      0|0:62:19       0|0:100:36
+5      108634900       rs6594365       A       G       .       PASS    AA=A;DP=87      GT:GQ:DP        0|1:100:17      0|0:62:20       0|0:100:51
+13     63782053        rs17084765      G       A       .       PASS    AA=A;DP=103     GT:GQ:DP        0|1:100:17      0|0:62:20       0|0:100:66
+13     93044684        .       G       A       .       PASS    AA=G;DP=99      GT:GQ:DP        0|1:100:17      0|0:62:21       0|0:100:53
+4      156370903       .       C       A       .       PASS    AA=C;DP=72      GT:GQ:DP        0|1:100:17      0|0:62:21       0|0:81:27
+18     11230683        .       A       G       .       PASS    AA=A;DP=84      GT:GQ:DP        0|1:100:17      0|0:65:20       0|0:100:48
+4      97645533        rs13133119      C       T       .       PASS    AA=T;DP=98      GT:GQ:DP        0|1:100:17      0|0:65:20       0|0:100:62
+13     60104350        rs9563819       A       C       .       PASS    AA=C;DP=90      GT:GQ:DP        0|1:100:17      0|0:65:21       0|0:100:53
+19     20394224        rs35705374      G       A       .       PASS    AA=-;DP=93      GT:GQ:DP        0|1:100:17      0|0:65:21       0|0:100:54
+15     35051113        .       C       T       .       PASS    AA=C;DP=103     GT:GQ:DP        0|1:100:17      0|0:65:23       0|0:100:64
+4      163650349       .       G       T       .       PASS    AA=g;DP=130     GT:GQ:DP        0|1:100:17      0|0:68:21       0|0:100:42
+1      236059031       rs12025891      G       A       .       PASS    AA=G;DP=136;HM2;HM3     GT:GQ:DP        0|1:100:17      0|0:68:21       0|0:100:47
+4      30602505        rs28621782      G       T       .       PASS    AA=G;DP=85      GT:GQ:DP        0|1:100:17      0|0:68:21       0|0:100:47
+13     110912433       .       G       A       .       PASS    AA=G;DP=67      GT:GQ:DP        0|1:100:17      0|0:68:21       0|0:81:27
+11     102349397       .       A       G       .       PASS    AA=A;DP=88      GT:GQ:DP        0|1:100:17      0|0:68:22       0|0:100:49
+3      22373885        .       C       G       .       PASS    AA=C;DP=94      GT:GQ:DP        0|1:100:17      0|0:70:27       0|0:100:49
+7      54209011        .       C       T       .       PASS    AA=C;DP=90      GT:GQ:DP        0|1:100:17      0|0:71:22       0|0:100:52
+10     127043696       rs1072801       A       G       .       PASS    AA=A;DP=94      GT:GQ:DP        0|1:100:17      0|0:71:22       0|0:100:54
+9      87484031        .       T       C       .       PASS    AA=T;DP=94      GT:GQ:DP        0|1:100:17      0|0:71:22       0|0:100:55
+4      133250949       rs7658971       G       A       .       PASS    AA=A;DP=113     GT:GQ:DP        0|1:100:17      0|0:71:22       0|0:100:71
+7      15077662        rs28484947      A       G       .       PASS    AA=A;DP=93      GT:GQ:DP        0|1:100:17      0|0:71:23       0|0:100:52
+4      61250341        rs60007454      T       C       .       PASS    AA=T;DP=84      GT:GQ:DP        0|1:100:17      0|0:74:23       0|0:100:43
+18     21364917        .       C       T       .       PASS    AA=C;DP=101     GT:GQ:DP        0|1:100:17      0|0:74:24       0|0:100:58
+11     99646364        .       G       A       .       PASS    AA=G;DP=116     GT:GQ:DP        0|1:100:17      0|0:77:24       0|0:100:75
+20     5298559 .       G       A       .       PASS    AA=G;DP=76      GT:GQ:DP        0|1:100:17      0|0:77:24       0|0:81:27
+5      105184787       .       T       C       .       PASS    AA=T;DP=111     GT:GQ:DP        0|1:100:17      0|0:77:25       0|0:100:71
+17     57266581        rs7223243       G       A       .       PASS    AA=G;DP=107     GT:GQ:DP        0|1:100:17      0|0:80:25       0|0:100:65
+8      81886047        .       T       C       .       PASS    AA=T;DP=90      GT:GQ:DP        0|1:100:17      0|0:83:26       0|0:100:46
+2      35249498        .       C       T       .       PASS    AA=C;DP=95      GT:GQ:DP        0|1:100:17      0|0:83:26       0|0:100:50
+10     57546890        rs1392723       C       T       .       PASS    AA=C;DP=93      GT:GQ:DP        0|1:100:17      0|0:83:27       0|0:100:49
+1      24644517        rs41406445      C       T       .       PASS    AA=C;DP=117;HM3 GT:GQ:DP        0|1:100:17      0|0:86:30       0|0:100:71
+1      188656364       rs6678713       A       G       .       PASS    AA=G;DP=107;HM2;HM3     GT:GQ:DP        0|1:100:17      0|0:92:29       0|0:100:46
+16     63305970        rs1423988       T       C       .       PASS    AA=T;DP=110     GT:GQ:DP        0|1:100:17      0|0:92:30       0|0:100:63
+15     95126201        rs4965135       G       T       .       PASS    AA=T;DP=74      GT:GQ:DP        0|1:100:17      0|1:100:15      0|0:93:32
+4      127590240       rs60958358      G       A       .       PASS    AA=A;DP=101     GT:GQ:DP        0|1:100:17      0|1:100:18      0|0:100:67
+13     28565985        rs9506098       G       A       .       PASS    AA=A;DP=88      GT:GQ:DP        0|1:100:17      0|1:100:21      0|0:100:48
+9      10395795        rs10733208      C       T       .       PASS    AA=T;DP=88      GT:GQ:DP        0|1:100:17      0|1:100:21      0|0:100:53
+11     2746124 .       G       A       .       PASS    AA=G;DP=105     GT:GQ:DP        0|1:100:17      0|1:100:22      0|0:100:64
+6      147793361       rs633147        G       A       .       PASS    AA=G;DP=93      GT:GQ:DP        0|1:100:17      0|1:100:24      0|0:100:56
+7      46146057        rs10275333      C       T       .       PASS    AA=C;DP=89      GT:GQ:DP        0|1:100:17      0|1:100:26      0|0:100:47
+17     53579061        rs985346        A       G       .       PASS    AA=G;DP=121     GT:GQ:DP        0|1:100:17      0|1:100:26      0|0:73:37
+6      91892310        rs59878655      G       A       .       PASS    AA=G;DP=99      GT:GQ:DP        0|1:100:17      0|1:100:27      0|0:100:55
+3      41750174        rs6599171       T       C       .       PASS    AA=T;DP=72      GT:GQ:DP        0|1:100:17      0|1:35:10       0|0:100:46
+10     26271856        rs7070437       T       C       .       PASS    AA=C;DP=79      GT:GQ:DP        0|1:100:17      0|1:36:11       0|0:100:49
+6      85850306        .       G       A       .       PASS    AA=G;DP=92      GT:GQ:DP        0|1:100:17      0|1:43:15       0|0:100:62
+6      28284394        rs1233666       A       C       .       PASS    AA=A;DP=102     GT:GQ:DP        0|1:100:17      0|1:60:16       0|0:100:69
+7      90573916        rs705354        A       G       .       PASS    AA=A;DP=79      GT:GQ:DP        0|1:100:17      0|1:64:14       0|0:100:42
+2      187603805       .       C       T       .       PASS    AA=C;DP=99      GT:GQ:DP        0|1:100:17      0|1:65:14       0|0:100:70
+5      146022509       rs322977        C       A       .       PASS    AA=C;DP=63      GT:GQ:DP        0|1:100:17      0|1:66:10       0|0:86:30
+8      40739513        rs60343283      G       T       .       PASS    AA=G;DP=115     GT:GQ:DP        0|1:100:17      0|1:70:24       0|0:100:75
+5      100841481       rs350504        T       A       .       PASS    AA=T;DP=87      GT:GQ:DP        0|1:100:17      0|1:71:19       0|0:57:20
+11     28253105        rs10835304      A       G       .       PASS    AA=A;DP=70      GT:GQ:DP        0|1:100:17      0|1:81:15       0|0:100:38
+21     18614420        rs55941767      G       A       .       PASS    AA=G;DP=80      GT:GQ:DP        0|1:100:17      0|1:99:16       0|0:68:35
+2      52277263        rs10183058      G       A       .       PASS    AA=A;DP=88      GT:GQ:DP        0|1:100:17      1|1:21:8        0|1:100:57
+12     67280518        rs2468415       A       G       .       PASS    AA=G;DP=83      GT:GQ:DP        0|1:100:17      1|1:28:18       0|1:100:50
+3      99130365        rs1498651       G       T       .       PASS    AA=g;DP=59      GT:GQ:DP        0|1:100:17      1|1:30:11       0|1:100:26
+17     34808929        rs8076546       G       A       .       PASS    AA=A;DP=81      GT:GQ:DP        0|1:100:17      1|1:36:19       0|1:100:33
+6      45145355        rs9472433       A       G       .       PASS    AA=A;DP=75      GT:GQ:DP        0|1:100:17      1|1:39:14       0|1:100:43
+18     27516200        rs9954432       G       A       .       PASS    AA=g;DP=85      GT:GQ:DP        0|1:100:17      1|1:42:15       0|1:100:52
+13     69459430        rs60435028      T       C       .       PASS    AA=T;DP=67      GT:GQ:DP        0|1:100:17      1|1:42:16       0|1:100:34
+7      12787980        rs6974625       G       A       .       PASS    AA=A;DP=65      GT:GQ:DP        0|1:100:17      1|1:45:16       0|1:100:29
+7      78050063        rs6949875       G       A       .       PASS    AA=A;DP=119     GT:GQ:DP        0|1:100:17      1|1:51:20       0|1:100:81
+1      102662715       rs1340395       C       T       .       PASS    AA=T;DP=87;HM2  GT:GQ:DP        0|1:100:17      1|1:57:20       0|1:100:49
+4      137820835       rs12641605      T       C       .       PASS    AA=C;DP=98      GT:GQ:DP        0|1:100:17      1|1:63:22       0|1:100:59
+4      137376663       .       A       C       .       PASS    AA=A;DP=109     GT:GQ:DP        0|1:100:18      0|0:100:32      0|0:100:59
+9      104547302       rs16922141      G       T       .       PASS    AA=G;DP=71      GT:GQ:DP        0|1:100:18      0|0:14:16       0|0:100:37
+4      168243880       rs60075852      C       T       .       PASS    AA=T;DP=68      GT:GQ:DP        0|1:100:18      0|0:16:14       0|0:99:33
+2      4589708 .       G       T       .       PASS    AA=G;DP=93      GT:GQ:DP        0|1:100:18      0|0:17:14       0|0:100:63
+10     8223777 rs482858        C       A       .       PASS    AA=C;DP=97      GT:GQ:DP        0|1:100:18      0|0:18:15       0|0:100:66
+13     63164873        rs9564093       C       A       .       PASS    AA=C;DP=67      GT:GQ:DP        0|1:100:18      0|0:18:15       0|0:96:32
+3      156081817       .       T       A       .       PASS    AA=T;DP=85      GT:GQ:DP        0|1:100:18      0|0:24:17       0|0:100:50
+10     76593443        rs2997753       T       A       .       PASS    AA=T;DP=106     GT:GQ:DP        0|1:100:18      0|0:27:18       0|0:100:72
+7      146706000       .       C       T       .       PASS    AA=T;DP=76      GT:GQ:DP        0|1:100:18      0|0:29:10       0|0:100:45
+16     10620926        rs12596425      G       C       .       PASS    AA=G;DP=68      GT:GQ:DP        0|1:100:18      0|0:29:8        0|0:100:36
+13     33093947        .       T       A       .       PASS    AA=T;DP=85      GT:GQ:DP        0|1:100:18      0|0:32:10       0|0:100:56
+3      61916925        rs43182 C       T       .       PASS    AA=C;DP=95      GT:GQ:DP        0|1:100:18      0|0:32:9        0|0:75:25
+5      45425796        .       C       A       .       PASS    AA=C;DP=102     GT:GQ:DP        0|1:100:18      0|0:33:24       0|0:100:55
+2      52634469        .       T       G       .       PASS    AA=t;DP=86      GT:GQ:DP        0|1:100:18      0|0:35:10       0|0:100:40
+1      43494297        rs11210819      G       A       .       PASS    AA=G;DP=78;HM2;HM3      GT:GQ:DP        0|1:100:18      0|0:35:10       0|0:100:51
+2      22499918        rs13029536      C       T       .       PASS    AA=C;DP=88      GT:GQ:DP        0|1:100:18      0|0:35:10       0|0:100:60
+4      138155297       .       T       C       .       PASS    AA=t;DP=80      GT:GQ:DP        0|1:100:18      0|0:37:15       0|0:100:47
+9      95638127        rs36110289      G       T       .       PASS    AA=G;DP=72      GT:GQ:DP        0|1:100:18      0|0:37:16       0|0:50:29
+4      7564991 .       T       G       .       PASS    AA=N;DP=110     GT:GQ:DP        0|1:100:18      0|0:37:22       0|0:100:70
+10     129066608       rs35769599      G       T       .       PASS    AA=G;DP=74      GT:GQ:DP        0|1:100:18      0|0:38:11       0|0:100:47
+20     54546957        rs35591772      T       G       .       PASS    AA=T;DP=95      GT:GQ:DP        0|1:100:18      0|0:39:22       0|0:100:57
+19     59679727        .       C       T       .       PASS    AA=C;DP=119     GT:GQ:DP        0|1:100:18      0|0:40:21       0|0:100:82
+3      163647821       rs35615498      G       A       .       PASS    AA=G;DP=99      GT:GQ:DP        0|1:100:18      0|0:41:12       0|0:100:66
+9      80548533        .       G       T       .       PASS    AA=G;DP=97      GT:GQ:DP        0|1:100:18      0|0:41:18       0|0:100:59
+8      32225043        .       G       T       .       PASS    AA=G;DP=92      GT:GQ:DP        0|1:100:18      0|0:41:23       0|0:100:50
+17     48046499        rs1492201       C       T       .       PASS    AA=T;DP=80      GT:GQ:DP        0|1:100:18      0|0:42:19       0|0:100:43
+1      234757680       .       T       G       .       PASS    AA=t;DP=115     GT:GQ:DP        0|1:100:18      0|0:43:20       0|0:100:76
+11     117624283       rs11216832      A       C       .       PASS    AA=A;DP=81      GT:GQ:DP        0|1:100:18      0|0:44:13       0|0:100:52
+16     81164544        rs11863817      A       G       .       PASS    AA=A;DP=93      GT:GQ:DP        0|1:100:18      0|0:44:13       0|0:100:62
+4      104546292       .       A       C       .       PASS    AA=A;DP=87      GT:GQ:DP        0|1:100:18      0|0:44:13       0|0:100:62
+8      63807388        rs12114187      G       A       .       PASS    AA=g;DP=75      GT:GQ:DP        0|1:100:18      0|0:44:14       0|0:100:41
+22     28877396        .       A       G       .       PASS    AA=A;DP=101     GT:GQ:DP        0|1:100:18      0|0:44:14       0|0:100:67
+11     59295216        .       A       G       .       PASS    AA=A;DP=105     GT:GQ:DP        0|1:100:18      0|0:45:21       0|0:100:65
+3      20762755        rs2366526       A       T       .       PASS    AA=T;DP=118     GT:GQ:DP        0|1:100:18      0|0:47:14       0|0:100:46
+10     62292276        rs10994545      C       T       .       PASS    AA=G;DP=89      GT:GQ:DP        0|1:100:18      0|0:47:14       0|0:100:57
+18     64632190        .       G       C       .       PASS    AA=G;DP=89      GT:GQ:DP        0|1:100:18      0|0:47:14       0|0:100:58
+14     41694807        rs61991041      C       A       .       PASS    AA=C;DP=93      GT:GQ:DP        0|1:100:18      0|0:47:14       0|0:100:59
+5      15832283        rs10051629      G       C       .       PASS    AA=G;DP=95      GT:GQ:DP        0|1:100:18      0|0:47:14       0|0:100:70
+12     115540362       rs60217521      T       C       .       PASS    AA=T;DP=91      GT:GQ:DP        0|1:100:18      0|0:47:16       0|0:100:56
+2      36492928        rs3770909       C       T       .       PASS    AA=C;DP=72      GT:GQ:DP        0|1:100:18      0|0:47:16       0|0:87:32
+1      189110268       rs9783011       C       G       .       PASS    AA=C;DP=71      GT:GQ:DP        0|1:100:18      0|0:47:17       0|0:100:34
+1      69904560        rs61782255      A       G       .       PASS    AA=a;DP=100     GT:GQ:DP        0|1:100:18      0|0:47:22       0|0:100:63
+14     40585676        rs12896713      C       G       .       PASS    AA=G;DP=108     GT:GQ:DP        0|1:100:18      0|0:48:20       0|0:100:73
+6      156777761       rs2819089       T       C       .       PASS    AA=T;DP=117     GT:GQ:DP        0|1:100:18      0|0:49:26       0|0:100:70
+12     29353633        rs11050178      G       A       .       PASS    AA=G;DP=88      GT:GQ:DP        0|1:100:18      0|0:50:16       0|0:100:56
+19     58191868        .       G       T       .       PASS    AA=g;DP=90      GT:GQ:DP        0|1:100:18      0|0:50:16       0|0:100:57
+2      62642782        rs720193        T       C       .       PASS    AA=T;DP=100     GT:GQ:DP        0|1:100:18      0|0:50:16       0|0:100:67
+18     75461645        rs8096490       A       G       .       PASS    AA=A;DP=105     GT:GQ:DP        0|1:100:18      0|0:50:16       0|0:100:72
+10     115434113       .       G       A       .       PASS    AA=N;DP=94      GT:GQ:DP        0|1:100:18      0|0:50:17       0|0:100:59
+1      174160329       .       C       A       .       PASS    AA=C;DP=92      GT:GQ:DP        0|1:100:18      0|0:50:19       0|0:100:54
+11     84402443        rs7105774       T       C       .       PASS    AA=T;DP=82      GT:GQ:DP        0|1:100:18      0|0:52:16       0|0:100:49
+15     24983263        .       T       A       .       PASS    AA=T;DP=82      GT:GQ:DP        0|1:100:18      0|0:53:17       0|0:100:48
+12     43320755        .       A       T       .       PASS    AA=A;DP=98      GT:GQ:DP        0|1:100:18      0|0:53:17       0|0:100:64
+3      146610663       rs61326074      G       A       .       PASS    AA=A;DP=71      GT:GQ:DP        0|1:100:18      0|0:53:18       0|0:100:35
+12     83430890        rs1903190       T       C       .       PASS    AA=T;DP=97      GT:GQ:DP        0|1:100:18      0|0:53:18       0|0:100:62
+5      129052076       rs27872 C       A       .       PASS    AA=C;DP=81      GT:GQ:DP        0|1:100:18      0|0:55:17       0|0:100:45
+11     21066545        .       A       C       .       PASS    AA=A;DP=109     GT:GQ:DP        0|1:100:18      0|0:55:23       0|0:100:69
+3      104046571       rs825339        T       C       .       PASS    AA=T;DP=77      GT:GQ:DP        0|1:100:18      0|0:56:17       0|0:100:44
+1      73266565        .       A       G       .       PASS    AA=a;DP=85      GT:GQ:DP        0|1:100:18      0|0:56:17       0|0:100:50
+13     30398231        rs3761865       G       A       .       PASS    AA=A;DP=85      GT:GQ:DP        0|1:100:18      0|0:56:17       0|0:100:50
+3      105331525       .       G       A       .       PASS    AA=G;DP=96      GT:GQ:DP        0|1:100:18      0|0:56:17       0|0:100:64
+4      135553654       rs6535015       C       T       .       PASS    AA=C;DP=100     GT:GQ:DP        0|1:100:18      0|0:56:17       0|0:100:68
+17     14408119        rs7207126       G       C       .       PASS    AA=C;DP=106     GT:GQ:DP        0|1:100:18      0|0:56:17       0|0:100:71
+5      166891902       rs7715415       A       G       .       PASS    AA=A;DP=60      GT:GQ:DP        0|1:100:18      0|0:56:17       0|0:43:21
+7      126353265       rs1419467       G       A       .       PASS    AA=G;DP=97      GT:GQ:DP        0|1:100:18      0|0:56:18       0|0:100:56
+20     11991623        rs6109250       C       T       .       PASS    AA=T;DP=105     GT:GQ:DP        0|1:100:18      0|0:56:18       0|0:100:70
+7      24664390        .       G       A       .       PASS    AA=G;DP=100     GT:GQ:DP        0|1:100:18      0|0:56:18       0|0:81:27
+17     11386372        rs2024479       A       G       .       PASS    AA=A;DP=97      GT:GQ:DP        0|1:100:18      0|0:56:19       0|0:100:60
+13     88858259        .       T       G       .       PASS    AA=T;DP=105     GT:GQ:DP        0|1:100:18      0|0:58:24       0|0:100:66
+2      139699917       rs35776939      A       T       .       PASS    AA=A;DP=75      GT:GQ:DP        0|1:100:18      0|0:59:18       0|0:100:38
+9      24464713        .       G       A       .       PASS    AA=G;DP=91      GT:GQ:DP        0|1:100:18      0|0:59:18       0|0:100:55
+11     36851505        rs1568276       G       T       .       PASS    AA=G;DP=97      GT:GQ:DP        0|1:100:18      0|0:59:18       0|0:100:62
+18     64428841        .       A       G       .       PASS    AA=A;DP=100     GT:GQ:DP        0|1:100:18      0|0:59:18       0|0:100:67
+13     63824209        rs1487251       G       A       .       PASS    AA=G;DP=105     GT:GQ:DP        0|1:100:18      0|0:59:18       0|0:100:70
+11     21677957        rs6483791       G       C       .       PASS    AA=C;DP=110     GT:GQ:DP        0|1:100:18      0|0:59:19       0|0:84:28
+8      136908968       .       T       C       .       PASS    AA=T;DP=117     GT:GQ:DP        0|1:100:18      0|0:59:21       0|0:100:79
+8      108173981       rs61203983      T       C       .       PASS    AA=C;DP=113     GT:GQ:DP        0|1:100:18      0|0:62:19       0|0:100:34
+5      102883883       rs34228 G       T       .       PASS    AA=T;DP=98      GT:GQ:DP        0|1:100:18      0|0:62:19       0|0:100:59
+7      13135320        rs7798772       C       T       .       PASS    AA=T;DP=94      GT:GQ:DP        0|1:100:18      0|0:62:19       0|0:100:59
+6      162914183       rs4091546       G       C       .       PASS    AA=G;DP=97      GT:GQ:DP        0|1:100:18      0|0:62:19       0|0:100:60
+1      4311207 rs675895        T       C       .       PASS    AA=-;DP=102;HM2 GT:GQ:DP        0|1:100:18      0|0:62:20       0|0:100:62
+2      180978295       rs11895493      G       C       .       PASS    AA=G;DP=84      GT:GQ:DP        0|1:100:18      0|0:62:21       0|0:100:43
+12     18440456        rs12230036      C       T       .       PASS    AA=T;DP=84      GT:GQ:DP        0|1:100:18      0|0:62:21       0|0:100:45
+16     62671283        .       T       C       .       PASS    AA=T;DP=87      GT:GQ:DP        0|1:100:18      0|0:64:25       0|0:100:44
+11     20004287        .       G       A       .       PASS    AA=G;DP=121     GT:GQ:DP        0|1:100:18      0|0:64:27       0|0:100:78
+18     48258688        .       T       C       .       PASS    AA=T;DP=117     GT:GQ:DP        0|1:100:18      0|0:65:20       0|0:100:34
+2      59329504        rs2215893       T       C       .       PASS    AA=T;DP=86      GT:GQ:DP        0|1:100:18      0|0:65:20       0|0:100:40
+13     25090081        .       T       A       .       PASS    AA=T;DP=82      GT:GQ:DP        0|1:100:18      0|0:65:20       0|0:100:43
+4      58028312        rs6810817       A       G       .       PASS    AA=A;DP=81      GT:GQ:DP        0|1:100:18      0|0:65:20       0|0:100:46
+18     24436174        rs11874113      C       T       .       PASS    AA=C;DP=87      GT:GQ:DP        0|1:100:18      0|0:65:20       0|0:100:49
+10     53930793        .       A       G       .       PASS    AA=A;DP=104     GT:GQ:DP        0|1:100:18      0|0:65:20       0|0:100:61
+10     98655456        rs17112208      C       T       .       PASS    AA=C;DP=99      GT:GQ:DP        0|1:100:18      0|0:65:20       0|0:100:61
+5      10175506        .       C       G       .       PASS    AA=C;DP=110     GT:GQ:DP        0|1:100:18      0|0:65:20       0|0:100:71
+3      79582945        .       G       A       .       PASS    AA=A;DP=76      GT:GQ:DP        0|1:100:18      0|0:65:21       0|0:100:38
+4      25915452        rs7680738       C       T       .       PASS    AA=G;DP=83      GT:GQ:DP        0|1:100:18      0|0:65:21       0|0:100:43
+8      78732538        rs6998256       T       G       .       PASS    AA=T;DP=81      GT:GQ:DP        0|1:100:18      0|0:65:21       0|0:100:43
+7      147297733       .       G       A       .       PASS    AA=g;DP=88      GT:GQ:DP        0|1:100:18      0|0:65:21       0|0:100:49
+2      133710440       .       C       T       .       PASS    AA=C;DP=98      GT:GQ:DP        0|1:100:18      0|0:65:21       0|0:100:60
+11     118774194       rs10892360      A       G       .       PASS    AA=a;DP=129     GT:GQ:DP        0|1:100:18      0|0:66:30       0|0:100:80
+7      83049372        rs17157873      T       C       .       PASS    AA=T;DP=78      GT:GQ:DP        0|1:100:18      0|0:68:21       0|0:100:40
+21     17292406        rs62224064      A       G       .       PASS    AA=A;DP=88      GT:GQ:DP        0|1:100:18      0|0:68:21       0|0:100:47
+13     35129488        rs20411 T       G       .       PASS    AA=G;DP=104     GT:GQ:DP        0|1:100:18      0|0:69:29       0|0:100:55
+8      135229858       .       A       G       .       PASS    AA=A;DP=87      GT:GQ:DP        0|1:100:18      0|0:71:22       0|0:100:49
+4      172126873       rs7658356       C       T       .       PASS    AA=C;DP=101     GT:GQ:DP        0|1:100:18      0|0:71:22       0|0:100:62
+6      31392600        rs28367704      T       C       .       PASS    AA=t;DP=113     GT:GQ:DP        0|1:100:18      0|0:71:22       0|0:100:73
+1      90865378        .       T       C       .       PASS    AA=T;DP=87      GT:GQ:DP        0|1:100:18      0|0:71:23       0|0:100:34
+3      166940905       rs9869499       G       A       .       PASS    AA=G;DP=94      GT:GQ:DP        0|1:100:18      0|0:71:23       0|0:100:52
+3      160435110       .       C       T       .       PASS    AA=C;DP=106     GT:GQ:DP        0|1:100:18      0|0:71:23       0|0:100:63
+3      65636418        .       C       T       .       PASS    AA=C;DP=105     GT:GQ:DP        0|1:100:18      0|0:71:23       0|0:100:68
+8      51367429        rs17697265      T       C       .       PASS    AA=C;DP=125     GT:GQ:DP        0|1:100:18      0|0:74:23       0|0:100:36
+2      164288053       .       A       T       .       PASS    AA=A;DP=88      GT:GQ:DP        0|1:100:18      0|0:74:23       0|0:100:44
+10     43673877        rs881714        C       A       .       PASS    AA=c;DP=104     GT:GQ:DP        0|1:100:18      0|0:74:23       0|0:100:59
+11     87581271        rs35364997      A       G       .       PASS    AA=A;DP=114     GT:GQ:DP        0|1:100:18      0|0:74:23       0|0:100:69
+13     30865013        rs9740726       C       G       .       PASS    AA=N;DP=116     GT:GQ:DP        0|1:100:18      0|0:74:23       0|0:100:70
+2      153589620       rs16832026      T       G       .       PASS    AA=T;DP=119     GT:GQ:DP        0|1:100:18      0|0:74:23       0|0:100:73
+2      222632876       rs348975        A       G       .       PASS    AA=a;DP=122     GT:GQ:DP        0|1:100:18      0|0:74:23       0|0:100:80
+13     42992504        rs9316033       A       G       .       PASS    AA=A;DP=122     GT:GQ:DP        0|1:100:18      0|0:74:23       0|0:90:42
+21     26155821        .       G       A       .       PASS    AA=A;DP=96      GT:GQ:DP        0|1:100:18      0|0:74:25       0|0:100:54
+6      86213793        .       G       A       .       PASS    AA=G;DP=87      GT:GQ:DP        0|1:100:18      0|0:77:24       0|0:100:46
+8      13651355        .       A       G       .       PASS    AA=A;DP=108     GT:GQ:DP        0|1:100:18      0|0:77:24       0|0:100:67
+3      177091865       .       G       A       .       PASS    AA=G;DP=118     GT:GQ:DP        0|1:100:18      0|0:77:24       0|0:100:73
+17     48292564        rs12950399      G       A       .       PASS    AA=A;DP=105     GT:GQ:DP        0|1:100:18      0|0:77:25       0|0:100:63
+2      83761632        rs17023807      A       G       .       PASS    AA=A;DP=115     GT:GQ:DP        0|1:100:18      0|0:77:32       0|0:100:65
+2      205878757       rs1113314       C       T       .       PASS    AA=T;DP=93      GT:GQ:DP        0|1:100:18      0|0:80:25       0|0:100:40
+2      189428638       rs1914035       T       C       .       PASS    AA=T;DP=96      GT:GQ:DP        0|1:100:18      0|0:83:26       0|0:100:52
+2      78009561        .       A       G       .       PASS    AA=A;DP=101     GT:GQ:DP        0|1:100:18      0|0:83:26       0|0:100:54
+6      69825791        rs635863        C       A       .       PASS    AA=A;DP=99      GT:GQ:DP        0|1:100:18      0|0:83:26       0|0:100:55
+14     78510267        rs31432 A       T       .       PASS    AA=A;DP=104     GT:GQ:DP        0|1:100:18      0|0:83:26       0|0:100:62
+15     24219958        .       G       A       .       PASS    AA=G;DP=109     GT:GQ:DP        0|1:100:18      0|0:83:26       0|0:100:67
+21     18739858        .       A       G       .       PASS    AA=a;DP=122     GT:GQ:DP        0|1:100:18      0|0:83:26       0|0:100:78
+13     68820790        rs2593515       A       G       .       PASS    AA=A;DP=89      GT:GQ:DP        0|1:100:18      0|0:83:26       0|0:93:31
+5      122086974       .       C       G       .       PASS    AA=C;DP=128     GT:GQ:DP        0|1:100:18      0|0:83:27       0|0:100:82
+11     37823942        rs55830410      G       A       .       PASS    AA=G;DP=98      GT:GQ:DP        0|1:100:18      0|0:83:28       0|0:100:50
+6      23157932        .       C       T       .       PASS    AA=C;DP=88      GT:GQ:DP        0|1:100:18      0|0:86:27       0|0:93:31
+1      198069800       rs2553738       C       T       .       PASS    AA=C;DP=111;HM2;HM3     GT:GQ:DP        0|1:100:18      0|0:89:28       0|0:100:64
+18     71463430        rs9964772       A       G       .       PASS    AA=G;DP=113     GT:GQ:DP        0|1:100:18      0|0:89:30       0|0:100:68
+17     66919709        rs9903935       A       C       .       PASS    AA=A;DP=100     GT:GQ:DP        0|1:100:18      0|0:92:30       0|0:100:54
+5      15534240        .       G       A       .       PASS    AA=G;DP=130     GT:GQ:DP        0|1:100:18      0|0:92:31       0|0:100:81
+2      37036807        rs7560263       G       T       .       PASS    AA=G;DP=149     GT:GQ:DP        0|1:100:18      0|0:95:30       0|0:100:41
+5      113989272       .       G       A       .       PASS    AA=G;DP=134     GT:GQ:DP        0|1:100:18      0|0:95:31       0|0:100:88
+4      112549131       .       T       C       .       PASS    AA=T;DP=84      GT:GQ:DP        0|1:100:18      0|1:100:14      0|0:100:51
+4      163025158       rs13148703      G       A       .       PASS    AA=A;DP=90      GT:GQ:DP        0|1:100:18      0|1:100:16      0|0:100:57
+7      46562691        rs11979031      C       T       .       PASS    AA=T;DP=109     GT:GQ:DP        0|1:100:18      0|1:100:17      0|0:100:74
+18     24477347        rs1910556       G       A       .       PASS    AA=A;DP=102     GT:GQ:DP        0|1:100:18      0|1:100:22      0|0:100:61
+4      162045503       rs12508662      T       C       .       PASS    AA=T;DP=72      GT:GQ:DP        0|1:100:18      0|1:100:22      0|0:47:25
+2      7252413 rs4669148       T       C       .       PASS    AA=T;DP=98      GT:GQ:DP        0|1:100:18      0|1:100:24      0|0:100:55
+5      84636326        rs2035579       G       A       .       PASS    AA=N;DP=121     GT:GQ:DP        0|1:100:18      0|1:100:24      0|0:100:58
+10     124839090       rs4980176       G       T       .       PASS    AA=G;DP=131     GT:GQ:DP        0|1:100:18      0|1:100:28      0|0:100:84
+11     100715630       rs7481005       T       C       .       PASS    AA=t;DP=115     GT:GQ:DP        0|1:100:18      0|1:100:29      0|0:100:69
+4      145436538       rs4388035       G       T       .       PASS    AA=G;DP=125     GT:GQ:DP        0|1:100:18      0|1:100:31      0|0:100:77
+20     51883611        rs6091756       A       G       .       PASS    AA=A;DP=130     GT:GQ:DP        0|1:100:18      0|1:40:27       0|0:100:86
+3      118897353       rs4340729       G       A       .       PASS    AA=g;DP=91      GT:GQ:DP        0|1:100:18      0|1:46:16       0|0:100:58
+15     52957435        rs12906102      C       T       .       PASS    AA=T;DP=111     GT:GQ:DP        0|1:100:18      0|1:53:23       0|0:100:70
+8      75633278        rs6990623       T       C       .       PASS    AA=C;DP=102     GT:GQ:DP        0|1:100:18      0|1:5:21        0|0:100:62
+7      12001094        rs9639109       C       T       .       PASS    AA=T;DP=131     GT:GQ:DP        0|1:100:18      0|1:70:13       0|0:100:62
+5      98409652        rs6885458       G       A       .       PASS    AA=A;DP=116     GT:GQ:DP        0|1:100:18      0|1:71:22       0|0:100:77
+1      190908393       rs1933712       T       C       .       PASS    AA=C;DP=81      GT:GQ:DP        0|1:100:18      0|1:75:14       0|0:99:37
+4      43677287        rs10010379      A       G       .       PASS    AA=A;DP=93      GT:GQ:DP        0|1:100:18      0|1:79:15       0|0:100:61
+17     67320616        rs55965202      G       A       .       PASS    AA=G;DP=108     GT:GQ:DP        0|1:100:18      0|1:95:20       0|0:100:71
+12     83578702        rs10862913      G       A       .       PASS    AA=A;DP=90      GT:GQ:DP        0|1:100:18      0|1:99:16       0|0:100:57
+15     27410241        rs817958        C       A       .       PASS    AA=A;DP=112     GT:GQ:DP        0|1:100:18      1|1:33:12       0|1:100:83
+8      63764230        rs7012066       C       T       .       PASS    AA=T;DP=77      GT:GQ:DP        0|1:100:18      1|1:36:13       0|1:100:42
+6      165509380       rs1661402       A       G       .       PASS    AA=G;DP=79      GT:GQ:DP        0|1:100:18      1|1:36:13       0|1:100:48
+9      88584042        rs7043314       C       T       .       PASS    AA=T;DP=90      GT:GQ:DP        0|1:100:18      1|1:39:14       0|1:100:57
+4      143679861       rs2113993       G       C       .       PASS    AA=C;DP=89      GT:GQ:DP        0|1:100:18      1|1:39:15       0|1:100:56
+5      9135280 rs2619929       C       T       .       PASS    AA=C;DP=92      GT:GQ:DP        0|1:100:18      1|1:39:17       0|1:100:53
+5      62927036        rs630523        T       G       .       PASS    AA=T;DP=74      GT:GQ:DP        0|1:100:18      1|1:42:15       0|1:100:40
+6      104385431       rs12332949      G       A       .       PASS    AA=G;DP=88      GT:GQ:DP        0|1:100:18      1|1:45:16       0|1:100:57
+12     85779545        rs17014258      A       C       .       PASS    AA=A;DP=72      GT:GQ:DP        0|1:100:18      1|1:48:17       0|1:100:37
+7      93635090        rs7778063       G       A       .       PASS    AA=A;DP=86      GT:GQ:DP        0|1:100:18      1|1:48:17       0|1:100:51
+19     61534046        rs7508292       A       C       .       PASS    AA=C;DP=74      GT:GQ:DP        0|1:100:18      1|1:4:9 0|1:100:44
+9      121825389       rs10984808      G       A       .       PASS    AA=A;DP=90      GT:GQ:DP        0|1:100:18      1|1:51:18       0|1:100:54
+4      95988826        rs13127842      C       A       .       PASS    AA=A;DP=122     GT:GQ:DP        0|1:100:18      1|1:54:19       0|1:100:46
+10     26371116        rs1578217       C       T       .       PASS    AA=c;DP=96      GT:GQ:DP        0|1:100:18      1|1:60:22       0|1:100:29
+8      137922297       rs6993416       T       C       .       PASS    AA=T;DP=90      GT:GQ:DP        0|1:100:18      1|1:66:23       0|1:100:50
+11     109155795       rs11213159      G       C       .       PASS    AA=G;DP=109     GT:GQ:DP        0|1:100:18      1|1:69:24       0|1:100:67
+20     45327366        rs761021        G       A       .       PASS    AA=G;DP=123     GT:GQ:DP        0|1:100:18      1|1:69:24       0|1:100:75
+4      78086691        rs28660252      T       C       .       PASS    AA=t;DP=115     GT:GQ:DP        0|1:100:18      1|1:72:27       0|1:100:72
+5      83150545        .       T       C       .       PASS    AA=T;DP=120     GT:GQ:DP        0|1:100:19      0|0:100:34      0|0:100:71
+6      62271962        rs9360113       T       C       .       PASS    AA=.;DP=141     GT:GQ:DP        0|1:100:19      0|0:100:39      0|0:100:84
+20     46614135        rs2869404       G       A       .       PASS    AA=g;DP=99      GT:GQ:DP        0|1:100:19      0|0:12:11       0|0:100:59
+8      70212505        rs10087122      G       A       .       PASS    AA=G;DP=86      GT:GQ:DP        0|1:100:19      0|0:16:14       0|0:100:52
+19     61872005        rs57866011      G       C       .       PASS    AA=G;DP=94      GT:GQ:DP        0|1:100:19      0|0:20:13       0|0:100:61
+7      16776216        .       C       T       .       PASS    AA=C;DP=98      GT:GQ:DP        0|1:100:19      0|0:21:16       0|0:100:63
+9      137718889       rs7851189       A       G       .       PASS    AA=A;DP=79      GT:GQ:DP        0|1:100:19      0|0:23:6        0|0:100:53
+4      129389499       rs11947174      A       G       .       PASS    AA=A;DP=63      GT:GQ:DP        0|1:100:19      0|0:23:6        0|0:84:28
+9      108932945       rs11789543      G       T       .       PASS    AA=G;DP=125     GT:GQ:DP        0|1:100:19      0|0:24:17       0|0:100:40
+6      13983640        rs1204247       C       T       .       PASS    AA=t;DP=102     GT:GQ:DP        0|1:100:19      0|0:24:17       0|0:100:64
+4      4872184 rs62291763      G       A       .       PASS    AA=G;DP=105     GT:GQ:DP        0|1:100:19      0|0:24:17       0|0:100:70
+19     8304597 rs2913954       G       A       .       PASS    AA=G;DP=70      GT:GQ:DP        0|1:100:19      0|0:26:7        0|0:56:34
+16     62464716        .       C       A       .       PASS    AA=C;DP=81      GT:GQ:DP        0|1:100:19      0|0:29:17       0|0:90:30
+16     69062386        rs17881219      T       C       .       PASS    AA=C;DP=91      GT:GQ:DP        0|1:100:19      0|0:29:8        0|0:100:52
+14     74060432        .       G       A       .       PASS    AA=G;DP=90      GT:GQ:DP        0|1:100:19      0|0:32:9        0|0:100:62
+1      91428132        rs596846        C       T       .       PASS    AA=T;DP=85      GT:GQ:DP        0|1:100:19      0|0:35:10       0|0:100:56
+3      22056730        .       A       G       .       PASS    AA=A;DP=110     GT:GQ:DP        0|1:100:19      0|0:35:20       0|0:100:72
+15     93333594        .       A       T       .       PASS    AA=A;DP=88      GT:GQ:DP        0|1:100:19      0|0:37:17       0|0:100:51
+3      88992231        .       G       A       .       PASS    AA=G;DP=98      GT:GQ:DP        0|1:100:19      0|0:37:21       0|0:100:55
+2      73977674        .       G       A       .       PASS    AA=G;DP=76      GT:GQ:DP        0|1:100:19      0|0:38:11       0|0:100:35
+13     27683794        rs1408244       C       A       .       PASS    AA=C;DP=81      GT:GQ:DP        0|1:100:19      0|0:38:11       0|0:100:48
+11     93852928        .       T       C       .       PASS    AA=T;DP=89      GT:GQ:DP        0|1:100:19      0|0:38:11       0|0:100:59
+11     39601512        .       C       T       .       PASS    AA=c;DP=91      GT:GQ:DP        0|1:100:19      0|0:38:11       0|0:100:60
+12     33965110        .       C       T       .       PASS    AA=C;DP=105     GT:GQ:DP        0|1:100:19      0|0:38:11       0|0:100:60
+9      82772508        rs12349910      A       T       .       PASS    AA=A;DP=80      GT:GQ:DP        0|1:100:19      0|0:38:13       0|0:100:48
+11     41175990        rs12421301      A       C       .       PASS    AA=A;DP=107     GT:GQ:DP        0|1:100:19      0|0:38:22       0|0:66:22
+10     111820870       rs7072613       G       A       .       PASS    AA=G;DP=70      GT:GQ:DP        0|1:100:19      0|0:41:12       0|0:100:40
+2      180323672       rs356406        G       A       .       PASS    AA=G;DP=79      GT:GQ:DP        0|1:100:19      0|0:41:12       0|0:100:48
+13     89195066        rs9515613       A       G       .       PASS    AA=A;DP=63      GT:GQ:DP        0|1:100:19      0|0:41:12       0|0:63:21
+7      83895845        rs1228895       T       C       .       PASS    AA=T;DP=78      GT:GQ:DP        0|1:100:19      0|0:44:13       0|0:100:36
+6      163105020       .       C       T       .       PASS    AA=G;DP=76      GT:GQ:DP        0|1:100:19      0|0:44:13       0|0:100:44
+15     51679293        rs2414248       T       G       .       PASS    AA=T;DP=83      GT:GQ:DP        0|1:100:19      0|0:44:13       0|0:100:49
+3      99468082        rs2316339       C       A       .       PASS    AA=C;DP=84      GT:GQ:DP        0|1:100:19      0|0:44:13       0|0:100:49
+13     35081604        .       G       A       .       PASS    AA=G;DP=94      GT:GQ:DP        0|1:100:19      0|0:44:13       0|0:100:63
+3      109022497       .       C       T       .       PASS    AA=C;DP=101     GT:GQ:DP        0|1:100:19      0|0:44:13       0|0:100:70
+1      15177256        .       C       T       .       PASS    AA=C;DP=112     GT:GQ:DP        0|1:100:19      0|0:44:13       0|0:100:80
+10     113926829       rs56283557      A       G       .       PASS    AA=A;DP=73      GT:GQ:DP        0|1:100:19      0|0:44:13       0|0:93:31
+10     61105453        .       C       A       .       PASS    AA=C;DP=91      GT:GQ:DP        0|1:100:19      0|0:44:14       0|0:100:57
+9      109741030       rs12554673      G       A       .       PASS    AA=G;DP=96      GT:GQ:DP        0|1:100:19      0|0:46:21       0|0:100:58
+5      26893577        rs7341081       A       G       .       PASS    AA=G;DP=92      GT:GQ:DP        0|1:100:19      0|0:47:14       0|0:100:58
+2      188531905       .       T       C       .       PASS    AA=C;DP=74      GT:GQ:DP        0|1:100:19      0|0:47:15       0|0:100:41
+6      121425044       .       C       T       .       PASS    AA=C;DP=75      GT:GQ:DP        0|1:100:19      0|0:47:15       0|0:100:41
+1      105313072       rs4847075       G       A       .       PASS    AA=G;DP=83      GT:GQ:DP        0|1:100:19      0|0:47:22       0|0:100:41
+3      176796236       .       G       A       .       PASS    AA=G;DP=94      GT:GQ:DP        0|1:100:19      0|0:48:20       0|0:100:53
+1      238270678       .       C       A       .       PASS    AA=C;DP=99      GT:GQ:DP        0|1:100:19      0|0:49:20       0|0:100:63
+11     97955745        .       G       T       .       PASS    AA=G;DP=102     GT:GQ:DP        0|1:100:19      0|0:50:15       0|0:66:22
+8      131093312       rs7013752       C       T       .       PASS    AA=C;DP=72      GT:GQ:DP        0|1:100:19      0|0:50:16       0|0:100:38
+3      22226423        .       C       T       .       PASS    AA=T;DP=103     GT:GQ:DP        0|1:100:19      0|0:50:16       0|0:100:69
+2      166962006       .       A       G       .       PASS    AA=A;DP=97      GT:GQ:DP        0|1:100:19      0|0:52:17       0|0:100:60
+19     3639063 rs10415924      C       G       .       PASS    AA=G;DP=78      GT:GQ:DP        0|1:100:19      0|0:53:16       0|0:100:36
+8      33855857        .       C       T       .       PASS    AA=C;DP=94      GT:GQ:DP        0|1:100:19      0|0:53:16       0|0:100:59
+3      175126822       rs9881837       C       T       .       PASS    AA=C;DP=95      GT:GQ:DP        0|1:100:19      0|0:53:16       0|0:100:63
+4      134069893       rs4426795       G       C       .       PASS    AA=G;DP=109     GT:GQ:DP        0|1:100:19      0|0:53:16       0|0:100:73
+15     23726120        .       T       C       .       PASS    AA=T;DP=113     GT:GQ:DP        0|1:100:19      0|0:53:16       0|0:100:77
+3      85703311        rs62250496      G       T       .       PASS    AA=G;DP=81      GT:GQ:DP        0|1:100:19      0|0:53:16       0|0:84:35
+3      20032486        .       C       T       .       PASS    AA=C;DP=70      GT:GQ:DP        0|1:100:19      0|0:53:16       0|0:99:34
+5      24132088        rs6878892       A       G       .       PASS    AA=A;DP=82      GT:GQ:DP        0|1:100:19      0|0:53:17       0|0:100:44
+2      99987087        rs55681051      T       C       .       PASS    AA=T;DP=93      GT:GQ:DP        0|1:100:19      0|0:55:19       0|0:100:54
+3      161081423       rs56008026      A       T       .       PASS    AA=A;DP=83      GT:GQ:DP        0|1:100:19      0|0:56:17       0|0:100:50
+5      27012637        .       C       G       .       PASS    AA=C;DP=107     GT:GQ:DP        0|1:100:19      0|0:56:17       0|0:100:52
+2      215869141       rs60899966      T       C       .       PASS    AA=C;DP=97      GT:GQ:DP        0|1:100:19      0|0:56:17       0|0:100:66
+6      169246362       rs10806663      C       T       .       PASS    AA=C;DP=101     GT:GQ:DP        0|1:100:19      0|0:56:17       0|0:100:67
+4      116521975       rs4834467       A       G       .       PASS    AA=A;DP=72      GT:GQ:DP        0|1:100:19      0|0:56:17       0|0:69:23
+9      15137382        .       T       G       .       PASS    AA=T;DP=81      GT:GQ:DP        0|1:100:19      0|0:56:18       0|0:100:44
+3      177734981       .       C       A       .       PASS    AA=C;DP=122     GT:GQ:DP        0|1:100:19      0|0:56:18       0|0:100:66
+4      133986513       rs7670558       T       A       .       PASS    AA=A;DP=102     GT:GQ:DP        0|1:100:19      0|0:56:19       0|0:100:63
+5      12624209        .       G       C       .       PASS    AA=G;DP=78      GT:GQ:DP        0|1:100:19      0|0:59:18       0|0:100:42
+9      19429069        rs7025070       A       T       .       PASS    AA=A;DP=85      GT:GQ:DP        0|1:100:19      0|0:59:18       0|0:100:46
+7      123574819       rs718588        A       G       .       PASS    AA=G;DP=91      GT:GQ:DP        0|1:100:19      0|0:59:18       0|0:100:52
+12     71599594        rs1400146       T       G       .       PASS    AA=T;DP=95      GT:GQ:DP        0|1:100:19      0|0:59:18       0|0:100:59
+8      2870724 .       T       C       .       PASS    AA=T;DP=96      GT:GQ:DP        0|1:100:19      0|0:59:18       0|0:100:60
+10     8807982 .       A       C       .       PASS    AA=C;DP=98      GT:GQ:DP        0|1:100:19      0|0:59:18       0|0:100:62
+6      67916192        .       C       T       .       PASS    AA=c;DP=78      GT:GQ:DP        0|1:100:19      0|0:59:19       0|0:100:40
+3      184482607       .       G       A       .       PASS    AA=G;DP=95      GT:GQ:DP        0|1:100:19      0|0:59:19       0|0:100:56
+6      17676625        rs6926696       G       A       .       PASS    AA=G;DP=94      GT:GQ:DP        0|1:100:19      0|0:59:19       0|0:100:57
+14     52423104        .       G       C       .       PASS    AA=G;DP=103     GT:GQ:DP        0|1:100:19      0|0:59:19       0|0:100:64
+8      97976792        rs13262765      G       A       .       PASS    AA=G;DP=106     GT:GQ:DP        0|1:100:19      0|0:59:19       0|0:100:69
+4      182669656       rs6849671       A       G       .       PASS    AA=G;DP=132     GT:GQ:DP        0|1:100:19      0|0:60:30       0|0:100:87
+8      118306545       rs17813547      T       C       .       PASS    AA=T;DP=125     GT:GQ:DP        0|1:100:19      0|0:62:19       0|0:100:35
+3      116225169       rs59547882      C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        0|1:100:19      0|0:62:19       0|0:100:38
+7      132852278       .       A       G       .       PASS    AA=A;DP=82      GT:GQ:DP        0|1:100:19      0|0:62:19       0|0:100:43
+13     80907833        rs2329185       G       C       .       PASS    AA=N;DP=94      GT:GQ:DP        0|1:100:19      0|0:62:19       0|0:100:56
+9      24670387        .       C       T       .       PASS    AA=C;DP=98      GT:GQ:DP        0|1:100:19      0|0:62:19       0|0:100:60
+3      105433753       rs9875345       T       C       .       PASS    AA=T;DP=104     GT:GQ:DP        0|1:100:19      0|0:62:19       0|0:100:63
+4      85234481        .       T       A       .       PASS    AA=T;DP=82      GT:GQ:DP        0|1:100:19      0|0:62:19       0|0:82:35
+3      95807420        .       C       T       .       PASS    AA=c;DP=82      GT:GQ:DP        0|1:100:19      0|0:62:20       0|0:100:44
+1      105423716       rs6583109       A       G       .       PASS    AA=A;DP=86      GT:GQ:DP        0|1:100:19      0|0:62:20       0|0:100:48
+8      83046814        rs59006682      C       G       .       PASS    AA=C;DP=102     GT:GQ:DP        0|1:100:19      0|0:62:20       0|0:100:63
+17     12344661        rs237290        C       G       .       PASS    AA=C;DP=99      GT:GQ:DP        0|1:100:19      0|0:62:20       0|0:100:66
+12     43379494        rs7295485       C       T       .       PASS    AA=C;DP=108     GT:GQ:DP        0|1:100:19      0|0:62:21       0|0:100:66
+17     11906543        rs10445267      A       T       .       PASS    AA=A;DP=102     GT:GQ:DP        0|1:100:19      0|0:64:24       0|0:100:48
+2      85402922        .       G       A       .       PASS    AA=G;DP=122     GT:GQ:DP        0|1:100:19      0|0:64:25       0|0:100:80
+8      24252065        rs62502750      A       G       .       PASS    AA=G;DP=90      GT:GQ:DP        0|1:100:19      0|0:65:20       0|0:100:51
+5      22903609        .       A       G       .       PASS    AA=A;DP=97      GT:GQ:DP        0|1:100:19      0|0:65:20       0|0:100:56
+14     103834712       rs4270104       C       A       .       PASS    AA=C;DP=115     GT:GQ:DP        0|1:100:19      0|0:65:20       0|0:100:76
+18     25174582        rs16946651      G       A       .       PASS    AA=G;DP=100     GT:GQ:DP        0|1:100:19      0|0:65:20       0|0:63:21
+13     89162302        rs9560418       G       A       .       PASS    AA=G;DP=80      GT:GQ:DP        0|1:100:19      0|0:65:22       0|0:100:40
+3      77415340        rs1441956       G       A       .       PASS    AA=A;DP=104     GT:GQ:DP        0|1:100:19      0|0:65:22       0|0:94:40
+2      61860542        rs7594665       T       G       .       PASS    AA=T;DP=95      GT:GQ:DP        0|1:100:19      0|0:67:28       0|0:100:49
+11     5817539 rs61875937      A       G       .       PASS    AA=A;DP=80      GT:GQ:DP        0|1:100:19      0|0:68:21       0|0:100:40
+3      121043962       .       A       G       .       PASS    AA=A;DP=80      GT:GQ:DP        0|1:100:19      0|0:68:21       0|0:100:40
+18     68296108        rs60472926      T       A       .       PASS    AA=A;DP=88      GT:GQ:DP        0|1:100:19      0|0:68:21       0|0:100:48
+6      141646895       rs12111112      T       C       .       PASS    AA=T;DP=81      GT:GQ:DP        0|1:100:19      0|0:68:21       0|0:53:29
+3      178258313       rs62298930      G       A       .       PASS    AA=G;DP=138     GT:GQ:DP        0|1:100:19      0|0:68:22       0|0:100:45
+3      38526399        .       C       G       .       PASS    AA=C;DP=113     GT:GQ:DP        0|1:100:19      0|0:68:22       0|0:100:72
+3      26530463        rs12492229      T       C       .       PASS    AA=-;DP=118     GT:GQ:DP        0|1:100:19      0|0:68:22       0|0:100:78
+12     98501263        .       A       G       .       PASS    AA=A;DP=88      GT:GQ:DP        0|1:100:19      0|0:68:23       0|0:100:47
+7      82556274        rs55951187      C       A       .       PASS    AA=C;DP=98      GT:GQ:DP        0|1:100:19      0|0:68:27       0|0:100:51
+2      166868516       rs12615462      A       G       .       PASS    AA=a;DP=94      GT:GQ:DP        0|1:100:19      0|0:71:22       0|0:100:53
+17     47666546        rs12600737      C       G       .       PASS    AA=C;DP=109     GT:GQ:DP        0|1:100:19      0|0:71:22       0|0:100:68
+6      11141611        rs9295757       G       T       .       PASS    AA=G;DP=113     GT:GQ:DP        0|1:100:19      0|0:71:22       0|0:100:68
+3      192881119       rs57757618      A       G       .       PASS    AA=A;DP=111     GT:GQ:DP        0|1:100:19      0|0:71:22       0|0:100:70
+1      107492370       .       G       A       .       PASS    AA=G;DP=114     GT:GQ:DP        0|1:100:19      0|0:71:22       0|0:100:77
+8      3398543 rs10100985      C       A       .       PASS    AA=A;DP=125     GT:GQ:DP        0|1:100:19      0|0:71:22       0|0:100:83
+11     39751982        .       T       C       .       PASS    AA=T;DP=82      GT:GQ:DP        0|1:100:19      0|0:71:23       0|0:100:39
+1      169217620       rs60370677      A       G       .       PASS    AA=A;DP=85      GT:GQ:DP        0|1:100:19      0|0:71:23       0|0:100:43
+21     46155774        rs61639161      C       T       .       PASS    AA=C;DP=96      GT:GQ:DP        0|1:100:19      0|0:71:23       0|0:100:43
+3      5823114 .       A       G       .       PASS    AA=A;DP=107     GT:GQ:DP        0|1:100:19      0|0:71:23       0|0:100:65
+3      81204434        rs2639202       C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        0|1:100:19      0|0:71:23       0|0:100:68
+5      144664699       .       C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        0|1:100:19      0|0:71:25       0|0:100:64
+6      113327492       rs9384849       C       A       .       PASS    AA=C;DP=119     GT:GQ:DP        0|1:100:19      0|0:71:34       0|0:100:68
+2      220669894       rs4674500       T       C       .       PASS    AA=T;DP=141     GT:GQ:DP        0|1:100:19      0|0:72:33       0|0:100:88
+7      80115712        rs3211814       A       G       .       PASS    AA=A;DP=89      GT:GQ:DP        0|1:100:19      0|0:74:23       0|0:100:43
+13     89227776        rs4988951       T       G       .       PASS    AA=T;DP=102     GT:GQ:DP        0|1:100:19      0|0:74:23       0|0:100:44
+11     83339932        rs11233847      A       C       .       PASS    AA=C;DP=99      GT:GQ:DP        0|1:100:19      0|0:74:23       0|0:100:55
+8      138140489       .       C       T       .       PASS    AA=C;DP=122     GT:GQ:DP        0|1:100:19      0|0:74:23       0|0:100:68
+7      85578878        rs34988589      T       A       .       PASS    AA=t;DP=115     GT:GQ:DP        0|1:100:19      0|0:74:23       0|0:100:77
+3      150905864       rs11719524      G       A       .       PASS    AA=G;DP=130     GT:GQ:DP        0|1:100:19      0|0:74:24       0|0:100:44
+8      15093825        .       C       T       .       PASS    AA=C;DP=95      GT:GQ:DP        0|1:100:19      0|0:74:25       0|0:100:50
+6      6235383 .       G       T       .       PASS    AA=G;DP=111     GT:GQ:DP        0|1:100:19      0|0:77:24       0|0:100:67
+4      139706282       rs7699441       A       G       .       PASS    AA=G;DP=109     GT:GQ:DP        0|1:100:19      0|0:77:25       0|0:100:65
+9      32426680        .       C       T       .       PASS    AA=C;DP=123     GT:GQ:DP        0|1:100:19      0|0:77:25       0|0:100:81
+18     72851555        rs17576996      A       C       .       PASS    AA=C;DP=130     GT:GQ:DP        0|1:100:19      0|0:77:30       0|0:100:83
+3      149214751       .       C       T       .       PASS    AA=T;DP=125     GT:GQ:DP        0|1:100:19      0|0:79:28       0|0:100:40
+15     43987053        rs2899386       G       A       .       PASS    AA=G;DP=94      GT:GQ:DP        0|1:100:19      0|0:80:25       0|0:100:37
+2      106781539       rs7607955       C       T       .       PASS    AA=C;DP=106     GT:GQ:DP        0|1:100:19      0|0:80:25       0|0:100:62
+18     26913996        .       C       T       .       PASS    AA=C;DP=84      GT:GQ:DP        0|1:100:19      0|0:80:25       0|0:93:33
+2      151006098       rs17435056      G       A       .       PASS    AA=A;DP=112     GT:GQ:DP        0|1:100:19      0|0:80:26       0|0:100:66
+3      60385227        rs241692        A       G       .       PASS    AA=A;DP=134     GT:GQ:DP        0|1:100:19      0|0:80:29       0|0:100:86
+6      5131655 .       T       C       .       PASS    AA=T;DP=144     GT:GQ:DP        0|1:100:19      0|0:80:31       0|0:100:44
+2      165990752       rs57578076      C       T       .       PASS    AA=C;DP=147     GT:GQ:DP        0|1:100:19      0|0:82:33       0|0:100:93
+5      113202256       rs4705602       G       A       .       PASS    AA=g;DP=94      GT:GQ:DP        0|1:100:19      0|0:83:26       0|0:100:49
+5      61816528        .       A       G       .       PASS    AA=A;DP=104     GT:GQ:DP        0|1:100:19      0|0:83:26       0|0:100:59
+4      168531210       rs17053215      A       T       .       PASS    AA=A;DP=113     GT:GQ:DP        0|1:100:19      0|0:83:26       0|0:100:68
+1      151371907       .       C       T       .       PASS    AA=c;DP=120     GT:GQ:DP        0|1:100:19      0|0:83:26       0|0:66:22
+6      64843830        rs9362433       T       C       .       PASS    AA=C;DP=128     GT:GQ:DP        0|1:100:19      0|0:83:27       0|0:100:67
+5      146642286       rs62377724      T       G       .       PASS    AA=T;DP=117     GT:GQ:DP        0|1:100:19      0|0:84:27       0|0:100:71
+3      46209290        .       A       G       .       PASS    AA=A;DP=75      GT:GQ:DP        0|1:100:19      0|0:86:27       0|0:75:25
+11     108470294       rs7927924       A       C       .       PASS    AA=A;DP=100     GT:GQ:DP        0|1:100:19      0|0:86:28       0|0:100:54
+9      23552864        .       G       C       .       PASS    AA=G;DP=120     GT:GQ:DP        0|1:100:19      0|0:86:28       0|0:100:73
+1      98006242        .       G       A       .       PASS    AA=g;DP=114     GT:GQ:DP        0|1:100:19      0|0:86:28       0|0:81:28
+2      66478825        rs11896953      G       A       .       PASS    AA=A;DP=148     GT:GQ:DP        0|1:100:19      0|0:89:28       0|0:100:55
+11     42204037        rs12364934      T       G       .       PASS    AA=T;DP=114     GT:GQ:DP        0|1:100:19      0|0:89:29       0|0:100:65
+4      83214298        rs12510329      T       G       .       PASS    AA=T;DP=104     GT:GQ:DP        0|1:100:19      0|0:95:30       0|0:100:58
+12     11127754        .       C       T       .       PASS    AA=c;DP=103     GT:GQ:DP        0|1:100:19      0|0:95:30       0|0:88:57
+10     32700514        rs61844547      G       A       .       PASS    AA=G;DP=109     GT:GQ:DP        0|1:100:19      0|0:95:31       0|0:100:61
+7      111745527       rs34571830      G       A       .       PASS    AA=G;DP=133     GT:GQ:DP        0|1:100:19      0|0:97:41       0|0:100:71
+4      168120249       rs60018448      G       T       .       PASS    AA=G;DP=103     GT:GQ:DP        0|1:100:19      0|1:100:14      0|0:100:68
+7      67824633        rs4574709       C       A       .       PASS    AA=A;DP=94      GT:GQ:DP        0|1:100:19      0|1:100:17      0|0:100:58
+8      69169652        rs7839245       G       A       .       PASS    AA=G;DP=90      GT:GQ:DP        0|1:100:19      0|1:100:20      0|0:100:39
+12     95622060        rs12322371      G       A       .       PASS    AA=G;DP=100     GT:GQ:DP        0|1:100:19      0|1:100:20      0|0:100:59
+1      77188805        rs1252600       T       A       .       PASS    AA=t;DP=108;HM2 GT:GQ:DP        0|1:100:19      0|1:100:20      0|0:100:71
+7      11866539        rs28570601      T       A       .       PASS    AA=A;DP=92      GT:GQ:DP        0|1:100:19      0|1:100:21      0|0:100:52
+13     67043964        rs9541150       G       A       .       PASS    AA=A;DP=106     GT:GQ:DP        0|1:100:19      0|1:100:21      0|0:100:68
+5      30912520        rs1921117       G       A       .       PASS    AA=G;DP=73      GT:GQ:DP        0|1:100:19      0|1:100:21      0|0:96:33
+5      77346586        .       G       A       .       PASS    AA=G;DP=109     GT:GQ:DP        0|1:100:19      0|1:100:22      0|0:100:71
+1      103511932       rs12136508      A       G       .       PASS    AA=A;DP=123     GT:GQ:DP        0|1:100:19      0|1:100:23      0|0:100:83
+5      113174830       rs10040195      C       T       .       PASS    AA=C;DP=131     GT:GQ:DP        0|1:100:19      0|1:100:28      0|0:100:40
+18     49845742        rs2614361       A       G       .       PASS    AA=a;DP=102     GT:GQ:DP        0|1:100:19      0|1:27:14       0|0:72:25
+13     57467861        rs9537905       C       G       .       PASS    AA=G;DP=84      GT:GQ:DP        0|1:100:19      0|1:27:9        0|0:100:57
+10     67155803        rs10822617      A       C       .       PASS    AA=C;DP=66      GT:GQ:DP        0|1:100:19      0|1:34:19       0|0:78:28
+9      8743285 rs10758991      A       T       .       PASS    AA=A;DP=125     GT:GQ:DP        0|1:100:19      0|1:3:23        0|0:100:42
+4      59072233        .       C       A       .       PASS    AA=A;DP=106     GT:GQ:DP        0|1:100:19      0|1:4:26        0|0:100:62
+15     41163496        rs1996675       C       T       .       PASS    AA=c;DP=103     GT:GQ:DP        0|1:100:19      0|1:50:16       0|0:100:68
+4      162282515       rs4505773       C       T       .       PASS    AA=T;DP=85      GT:GQ:DP        0|1:100:19      0|1:54:10       0|0:100:58
+5      64644909        .       A       G       .       PASS    AA=A;DP=85      GT:GQ:DP        0|1:100:19      0|1:55:18       0|0:100:49
+7      112991265       rs56008033      C       T       .       PASS    AA=C;DP=78      GT:GQ:DP        0|1:100:19      0|1:66:12       0|0:100:49
+6      161306120       rs673910        G       A       .       PASS    AA=a;DP=105     GT:GQ:DP        0|1:100:19      0|1:68:17       0|0:100:69
+2      187477947       .       A       G       .       PASS    AA=A;DP=103     GT:GQ:DP        0|1:100:19      0|1:69:22       0|0:100:64
+5      54896573        rs34460971      T       C       .       PASS    AA=T;DP=133     GT:GQ:DP        0|1:100:19      0|1:69:28       0|0:100:48
+3      1837371 rs12494240      C       T       .       PASS    AA=C;DP=100     GT:GQ:DP        0|1:100:19      0|1:79:21       0|0:100:60
+19     643877  rs35526822      T       C       .       PASS    AA=C;DP=67      GT:GQ:DP        0|1:100:19      0|1:80:12       0|0:72:25
+7      151882919       rs7782901       T       C       .       PASS    AA=T;DP=105     GT:GQ:DP        0|1:100:19      0|1:80:14       0|0:93:32
+4      137594071       rs13119979      C       T       .       PASS    AA=T;DP=102     GT:GQ:DP        0|1:100:19      0|1:87:15       0|0:100:69
+16     50421581        .       C       T       .       PASS    AA=T;DP=96      GT:GQ:DP        0|1:100:19      0|1:92:21       0|0:100:55
+2      116701537       rs2421567       G       A       .       PASS    AA=A;DP=88      GT:GQ:DP        0|1:100:19      1|1:16:20       0|1:100:48
+3      167371812       rs1158519       T       C       .       PASS    AA=t;DP=85      GT:GQ:DP        0|1:100:19      1|1:19:18       0|1:100:49
+1      34467571        rs2065792       G       T       .       PASS    AA=G;DP=117;HM2 GT:GQ:DP        0|1:100:19      1|1:24:20       0|1:100:36
+9      12872328        rs532181        C       A       .       PASS    AA=C;DP=84      GT:GQ:DP        0|1:100:19      1|1:29:21       0|1:100:42
+4      156586715       rs28651572      A       T       .       PASS    AA=T;DP=100     GT:GQ:DP        0|1:100:19      1|1:31:17       0|1:100:61
+21     24122311        rs1784889       C       A       .       PASS    AA=A;DP=90      GT:GQ:DP        0|1:100:19      1|1:32:16       0|1:100:57
+21     28068403        rs2831161       A       G       .       PASS    AA=A;DP=112     GT:GQ:DP        0|1:100:19      1|1:37:19       0|1:100:32
+15     61923525        rs2120252       T       G       .       PASS    AA=T;DP=96      GT:GQ:DP        0|1:100:19      1|1:39:14       0|1:100:64
+16     60695901        rs6498835       T       A       .       PASS    AA=t;DP=89      GT:GQ:DP        0|1:100:19      1|1:40:21       0|1:100:49
+5      103505893       rs10061258      C       T       .       PASS    AA=T;DP=85      GT:GQ:DP        0|1:100:19      1|1:42:15       0|1:100:50
+21     22611914        rs2827412       C       G       .       PASS    AA=G;DP=109     GT:GQ:DP        0|1:100:19      1|1:42:16       0|1:100:67
+1      96878765        rs1409058       T       C       .       PASS    AA=T;DP=88;HM2  GT:GQ:DP        0|1:100:19      1|1:45:16       0|1:100:53
+4      164631832       rs7689631       T       C       .       PASS    AA=T;DP=96      GT:GQ:DP        0|1:100:19      1|1:45:16       0|1:100:60
+9      75005348        rs10735620      C       T       .       PASS    AA=T;DP=93      GT:GQ:DP        0|1:100:19      1|1:45:17       0|1:100:59
+12     95491622        rs7136411       T       C       .       PASS    AA=C;DP=112     GT:GQ:DP        0|1:100:19      1|1:45:17       0|1:100:77
+10     79856622        rs6480892       A       G       .       PASS    AA=A;DP=87      GT:GQ:DP        0|1:100:19      1|1:48:18       0|1:100:52
+8      137267137       rs4909579       T       C       .       PASS    AA=T;DP=114     GT:GQ:DP        0|1:100:19      1|1:48:18       0|1:100:79
+2      99083315        rs6728723       G       A       .       PASS    AA=A;DP=96      GT:GQ:DP        0|1:100:19      1|1:51:18       0|1:100:58
+12     33305740        rs12307589      G       A       .       PASS    AA=g;DP=113     GT:GQ:DP        0|1:100:19      1|1:51:19       0|1:100:74
+4      63026919        rs28553878      C       T       .       PASS    AA=T;DP=94      GT:GQ:DP        0|1:100:19      1|1:54:20       0|1:100:54
+2      219083262       rs514356        C       T       .       PASS    AA=T;DP=115     GT:GQ:DP        0|1:100:19      1|1:56:26       0|1:100:69
+12     76570821        rs1727844       G       T       .       PASS    AA=T;DP=91      GT:GQ:DP        0|1:100:19      1|1:57:20       0|1:100:52
+7      15709496        rs726776        C       T       .       PASS    AA=T;DP=95      GT:GQ:DP        0|1:100:19      1|1:57:20       0|1:100:54
+3      77134571        rs11918007      G       A       .       PASS    AA=A;DP=83      GT:GQ:DP        0|1:100:19      1|1:57:21       0|1:100:44
+10     59058104        rs4501916       C       A       .       PASS    AA=A;DP=118     GT:GQ:DP        0|1:100:19      1|1:75:26       0|1:100:73
+7      49003685        rs4451255       T       C       .       PASS    AA=C;DP=105     GT:GQ:DP        0|1:100:19      1|1:78:27       0|1:100:59
+10     58010698        rs12256581      G       T       .       PASS    AA=G;DP=119     GT:GQ:DP        0|1:100:20      0|0:100:32      0|0:100:67
+4      149892935       .       A       G       .       PASS    AA=A;DP=122     GT:GQ:DP        0|1:100:20      0|0:100:33      0|0:100:70
+18     24262237        .       C       A       .       PASS    AA=C;DP=126     GT:GQ:DP        0|1:100:20      0|0:100:33      0|0:100:75
+3      82835601        rs35889148      G       A       .       PASS    AA=G;DP=142     GT:GQ:DP        0|1:100:20      0|0:100:35      0|0:100:88
+19     58516100        .       C       A       .       PASS    AA=c;DP=86      GT:GQ:DP        0|1:100:20      0|0:16:14       0|0:83:52
+10     1418609 .       C       A       .       PASS    AA=C;DP=58      GT:GQ:DP        0|1:100:20      0|0:18:9        0|0:69:23
+3      175715353       rs1515595       A       G       .       PASS    AA=A;DP=96      GT:GQ:DP        0|1:100:20      0|0:19:11       0|0:100:67
+13     88760314        .       G       A       .       PASS    AA=A;DP=86      GT:GQ:DP        0|1:100:20      0|0:21:16       0|0:100:53
+17     72974306        rs424290        A       G       .       PASS    AA=G;DP=100     GT:GQ:DP        0|1:100:20      0|0:23:18       0|0:100:62
+21     34368638        .       G       T       .       PASS    AA=G;DP=131     GT:GQ:DP        0|1:100:20      0|0:24:17       0|0:100:45
+18     17524083        .       A       T       .       PASS    AA=a;DP=85      GT:GQ:DP        0|1:100:20      0|0:26:8        0|0:100:57
+16     23927752        rs9924324       C       T       .       PASS    AA=C;DP=119     GT:GQ:DP        0|1:100:20      0|0:28:12       0|0:100:45
+3      192914982       rs9854374       C       A       .       PASS    AA=A;DP=98      GT:GQ:DP        0|1:100:20      0|0:28:17       0|0:100:61
+20     16655398        rs2092470       A       G       .       PASS    AA=A;DP=120     GT:GQ:DP        0|1:100:20      0|0:29:19       0|0:100:36
+4      97344896        .       A       G       .       PASS    AA=A;DP=81      GT:GQ:DP        0|1:100:20      0|0:29:8        0|0:100:52
+5      163381971       .       T       G       .       PASS    AA=T;DP=96      GT:GQ:DP        0|1:100:20      0|0:32:18       0|0:100:59
+3      187006642       rs57314358      C       T       .       PASS    AA=C;DP=78      GT:GQ:DP        0|1:100:20      0|0:35:10       0|0:100:48
+7      153572187       rs62484157      G       A       .       PASS    AA=g;DP=101     GT:GQ:DP        0|1:100:20      0|0:35:11       0|0:100:68
+13     45542621        rs9590941       A       C       .       PASS    AA=A;DP=105     GT:GQ:DP        0|1:100:20      0|0:35:11       0|0:100:74
+17     32090015        rs12950363      G       T       .       PASS    AA=G;DP=106     GT:GQ:DP        0|1:100:20      0|0:35:21       0|0:100:65
+15     24466912        rs28537327      C       T       .       PASS    AA=C;DP=111     GT:GQ:DP        0|1:100:20      0|0:38:11       0|0:100:38
+9      32360934        .       T       C       .       PASS    AA=T;DP=85      GT:GQ:DP        0|1:100:20      0|0:38:11       0|0:100:54
+16     3301463 .       G       A       .       PASS    AA=C;DP=84      GT:GQ:DP        0|1:100:20      0|0:38:12       0|0:100:50
+15     85900133        rs4887299       C       G       .       PASS    AA=C;DP=65      GT:GQ:DP        0|1:100:20      0|0:38:13       0|0:63:21
+12     87969303        .       A       G       .       PASS    AA=A;DP=105     GT:GQ:DP        0|1:100:20      0|0:39:22       0|0:100:65
+5      9412964 .       C       A       .       PASS    AA=C;DP=116     GT:GQ:DP        0|1:100:20      0|0:39:22       0|0:100:74
+8      113667971       .       C       T       .       PASS    AA=C;DP=75      GT:GQ:DP        0|1:100:20      0|0:41:12       0|0:100:40
+11     103306300       rs7949519       C       A       .       PASS    AA=C;DP=92      GT:GQ:DP        0|1:100:20      0|0:41:12       0|0:100:59
+18     43298580        rs12326858      A       G       .       PASS    AA=A;DP=93      GT:GQ:DP        0|1:100:20      0|0:41:12       0|0:100:63
+20     31938684        rs11698089      C       A       .       PASS    AA=A;DP=108     GT:GQ:DP        0|1:100:20      0|0:41:12       0|0:70:31
+11     5136753 .       A       G       .       PASS    AA=a;DP=87      GT:GQ:DP        0|1:100:20      0|0:44:13       0|0:100:57
+2      235929716       rs6750296       G       A       .       PASS    AA=A;DP=82      GT:GQ:DP        0|1:100:20      0|0:44:14       0|0:100:46
+12     84800985        rs12318859      A       G       .       PASS    AA=A;DP=82      GT:GQ:DP        0|1:100:20      0|0:44:14       0|0:100:47
+18     63157014        .       T       C       .       PASS    AA=T;DP=85      GT:GQ:DP        0|1:100:20      0|0:44:15       0|0:100:53
+19     38446149        rs36112953      G       A       .       PASS    AA=G;DP=103     GT:GQ:DP        0|1:100:20      0|0:44:15       0|0:100:67
+21     26018924        .       G       T       .       PASS    AA=G;DP=106     GT:GQ:DP        0|1:100:20      0|0:44:22       0|0:100:61
+11     97540573        .       T       C       .       PASS    AA=t;DP=77      GT:GQ:DP        0|1:100:20      0|0:47:14       0|0:100:35
+15     93217476        rs62016899      G       T       .       PASS    AA=C;DP=94      GT:GQ:DP        0|1:100:20      0|0:47:14       0|0:100:61
+1      63288228        .       T       A       .       PASS    AA=T;DP=93      GT:GQ:DP        0|1:100:20      0|0:47:14       0|0:100:62
+14     42610324        .       C       T       .       PASS    AA=C;DP=99      GT:GQ:DP        0|1:100:20      0|0:47:14       0|0:100:62
+17     973236  .       G       A       .       PASS    AA=G;DP=106     GT:GQ:DP        0|1:100:20      0|0:47:14       0|0:100:72
+12     23246433        rs12296348      C       A       .       PASS    AA=C;DP=91      GT:GQ:DP        0|1:100:20      0|0:47:20       0|0:100:49
+3      154747582       rs6769575       G       T       .       PASS    AA=G;DP=81      GT:GQ:DP        0|1:100:20      0|0:48:21       0|0:100:40
+3      187277640       rs6777779       G       T       .       PASS    AA=T;DP=103     GT:GQ:DP        0|1:100:20      0|0:50:15       0|0:100:69
+5      24859574        rs2131509       T       C       .       PASS    AA=T;DP=115     GT:GQ:DP        0|1:100:20      0|0:50:15       0|0:100:79
+13     88220265        rs4436658       T       C       .       PASS    AA=T;DP=56      GT:GQ:DP        0|1:100:20      0|0:50:15       0|0:39:13
+17     3150192 rs2855669       T       A       .       PASS    AA=T;DP=77      GT:GQ:DP        0|1:100:20      0|0:50:15       0|0:84:40
+6      55802553        rs16887216      A       G       .       PASS    AA=A;DP=89      GT:GQ:DP        0|1:100:20      0|0:50:16       0|0:100:56
+6      158387168       rs7744445       G       A       .       PASS    AA=g;DP=96      GT:GQ:DP        0|1:100:20      0|0:50:16       0|0:100:59
+4      20319352        rs35192095      C       T       .       PASS    AA=C;DP=103     GT:GQ:DP        0|1:100:20      0|0:50:16       0|0:100:65
+18     62165834        rs4343387       G       A       .       PASS    AA=A;DP=96      GT:GQ:DP        0|1:100:20      0|0:50:19       0|0:100:57
+3      83904991        .       T       C       .       PASS    AA=T;DP=72      GT:GQ:DP        0|1:100:20      0|0:53:16       0|0:100:35
+7      46971457        .       G       A       .       PASS    AA=g;DP=80      GT:GQ:DP        0|1:100:20      0|0:53:16       0|0:100:43
+7      38766907        rs2286085       C       G       .       PASS    AA=C;DP=83      GT:GQ:DP        0|1:100:20      0|0:53:16       0|0:100:48
+14     81352516        rs10129886      C       T       .       PASS    AA=C;DP=93      GT:GQ:DP        0|1:100:20      0|0:53:16       0|0:100:58
+4      92198790        .       T       A       .       PASS    AA=T;DP=111     GT:GQ:DP        0|1:100:20      0|0:53:16       0|0:100:77
+10     116910440       rs10466204      T       C       .       PASS    AA=T;DP=107     GT:GQ:DP        0|1:100:20      0|0:53:16       0|0:66:32
+3      29483110        .       G       A       .       PASS    AA=G;DP=101     GT:GQ:DP        0|1:100:20      0|0:53:16       0|0:87:30
+8      36084372        rs2843918       C       T       .       PASS    AA=T;DP=81      GT:GQ:DP        0|1:100:20      0|0:53:17       0|0:100:46
+21     28722592        .       G       A       .       PASS    AA=G;DP=101     GT:GQ:DP        0|1:100:20      0|0:53:17       0|0:100:67
+3      20467480        rs7636393       G       C       .       PASS    AA=G;DP=110     GT:GQ:DP        0|1:100:20      0|0:53:17       0|0:96:32
+21     41361937        rs7276149       C       T       .       PASS    AA=C;DP=104     GT:GQ:DP        0|1:100:20      0|0:53:18       0|0:100:65
+4      149052758       rs7669783       G       A       .       PASS    AA=A;DP=67      GT:GQ:DP        0|1:100:20      0|0:53:18       0|0:60:21
+9      3130919 .       G       A       .       PASS    AA=G;DP=96      GT:GQ:DP        0|1:100:20      0|0:54:21       0|0:100:57
+7      106610897       rs17427123      G       A       .       PASS    AA=A;DP=99      GT:GQ:DP        0|1:100:20      0|0:54:25       0|0:100:53
+2      49510808        rs1093386       T       C       .       PASS    AA=N;DP=139     GT:GQ:DP        0|1:100:20      0|0:55:33       0|0:100:76
+21     45601889        rs2838894       G       A       .       PASS    AA=A;DP=84      GT:GQ:DP        0|1:100:20      0|0:56:17       0|0:100:36
+6      9699040 rs9474783       G       C       .       PASS    AA=G;DP=85      GT:GQ:DP        0|1:100:20      0|0:56:17       0|0:100:36
+5      135975689       rs12153077      G       T       .       PASS    AA=G;DP=81      GT:GQ:DP        0|1:100:20      0|0:56:17       0|0:100:45
+7      42664157        rs9692327       T       C       .       PASS    AA=T;DP=91      GT:GQ:DP        0|1:100:20      0|0:56:17       0|0:100:52
+10     19574505        rs7090041       T       C       .       PASS    AA=T;DP=92      GT:GQ:DP        0|1:100:20      0|0:56:17       0|0:100:55
+8      122394624       rs11774560      T       A       .       PASS    AA=T;DP=108     GT:GQ:DP        0|1:100:20      0|0:56:17       0|0:96:32
+8      13583550        rs6998517       A       T       .       PASS    AA=a;DP=111     GT:GQ:DP        0|1:100:20      0|0:56:17       0|0:99:33
+1      197797648       rs6691743       A       G       .       PASS    AA=A;DP=103;HM2;HM3     GT:GQ:DP        0|1:100:20      0|0:56:18       0|0:100:64
+2      54137268        .       G       A       .       PASS    AA=G;DP=102     GT:GQ:DP        0|1:100:20      0|0:56:19       0|0:100:63
+14     80441729        rs28609268      C       T       .       PASS    AA=C;DP=107     GT:GQ:DP        0|1:100:20      0|0:56:20       0|0:100:68
+7      78318585        .       T       G       .       PASS    AA=t;DP=101     GT:GQ:DP        0|1:100:20      0|0:57:26       0|0:100:56
+19     63106325        rs36098237      G       A       .       PASS    AA=A;DP=94      GT:GQ:DP        0|1:100:20      0|0:59:18       0|0:100:57
+18     32573674        rs9959091       C       T       .       PASS    AA=T;DP=103     GT:GQ:DP        0|1:100:20      0|0:59:18       0|0:100:64
+4      98234352        rs11097540      C       T       .       PASS    AA=C;DP=88      GT:GQ:DP        0|1:100:20      0|0:59:19       0|0:100:49
+8      70260336        .       G       A       .       PASS    AA=G;DP=127     GT:GQ:DP        0|1:100:20      0|0:59:20       0|0:100:84
+1      64859006        rs1436757       G       T       .       PASS    AA=G;DP=100;HM2 GT:GQ:DP        0|1:100:20      0|0:60:30       0|0:100:51
+8      13435431        .       G       A       .       PASS    AA=A;DP=102     GT:GQ:DP        0|1:100:20      0|0:61:20       0|0:100:63
+1      45441815        .       T       C       .       PASS    AA=T;DP=87      GT:GQ:DP        0|1:100:20      0|0:62:19       0|0:100:36
+7      24581798        .       A       G       .       PASS    AA=a;DP=86      GT:GQ:DP        0|1:100:20      0|0:62:19       0|0:100:46
+19     17438772        .       T       C       .       PASS    AA=T;DP=96      GT:GQ:DP        0|1:100:20      0|0:62:19       0|0:100:54
+3      89469051        rs35173319      G       T       .       PASS    AA=T;DP=105     GT:GQ:DP        0|1:100:20      0|0:62:19       0|0:100:68
+7      11741567        .       C       T       .       PASS    AA=T;DP=113     GT:GQ:DP        0|1:100:20      0|0:62:19       0|0:100:71
+7      147051709       rs7785335       A       G       .       PASS    AA=A;DP=113     GT:GQ:DP        0|1:100:20      0|0:62:19       0|0:100:77
+7      105805173       .       A       G       .       PASS    AA=A;DP=124     GT:GQ:DP        0|1:100:20      0|0:62:20       0|0:100:39
+11     83425371        .       T       A       .       PASS    AA=T;DP=77      GT:GQ:DP        0|1:100:20      0|0:62:20       0|0:96:32
+3      59068077        .       G       A       .       PASS    AA=A;DP=110     GT:GQ:DP        0|1:100:20      0|0:62:21       0|0:100:70
+4      171460746       rs17630002      C       T       .       PASS    AA=C;DP=117     GT:GQ:DP        0|1:100:20      0|0:62:21       0|0:100:75
+7      4449770 .       A       G       .       PASS    AA=a;DP=128     GT:GQ:DP        0|1:100:20      0|0:62:27       0|0:100:84
+4      133566886       rs34934934      T       C       .       PASS    AA=T;DP=115     GT:GQ:DP        0|1:100:20      0|0:63:25       0|0:84:28
+3      107481139       .       C       A       .       PASS    AA=c;DP=90      GT:GQ:DP        0|1:100:20      0|0:65:20       0|0:100:51
+8      33591839        rs7017131       T       C       .       PASS    AA=C;DP=94      GT:GQ:DP        0|1:100:20      0|0:65:20       0|0:100:55
+3      8610305 rs9816456       C       T       .       PASS    AA=C;DP=97      GT:GQ:DP        0|1:100:20      0|0:65:20       0|0:100:56
+11     86725081        .       G       T       .       PASS    AA=G;DP=96      GT:GQ:DP        0|1:100:20      0|0:65:20       0|0:100:57
+4      58779165        .       G       A       .       PASS    AA=A;DP=105     GT:GQ:DP        0|1:100:20      0|0:65:20       0|0:100:61
+9      74499803        .       A       C       .       PASS    AA=A;DP=117     GT:GQ:DP        0|1:100:20      0|0:65:20       0|0:100:62
+4      64714356        .       C       A       .       PASS    AA=C;DP=109     GT:GQ:DP        0|1:100:20      0|0:65:20       0|0:100:63
+2      205484028       rs7589114       C       T       .       PASS    AA=T;DP=106     GT:GQ:DP        0|1:100:20      0|0:65:20       0|0:100:69
+9      17920253        rs7867179       C       T       .       PASS    AA=C;DP=109     GT:GQ:DP        0|1:100:20      0|0:65:20       0|0:100:71
+7      154993327       rs6459705       G       A       .       PASS    AA=G;DP=114     GT:GQ:DP        0|1:100:20      0|0:65:20       0|0:100:73
+5      85577503        .       A       T       .       PASS    AA=a;DP=85      GT:GQ:DP        0|1:100:20      0|0:65:21       0|0:100:45
+4      147837538       .       T       C       .       PASS    AA=T;DP=98      GT:GQ:DP        0|1:100:20      0|0:65:21       0|0:100:52
+11     43596691        rs2862963       C       T       .       PASS    AA=T;DP=130     GT:GQ:DP        0|1:100:20      0|0:65:21       0|0:100:89
+13     33021209        .       C       T       .       PASS    AA=C;DP=74      GT:GQ:DP        0|1:100:20      0|0:65:21       0|0:69:23
+5      22151145        .       T       C       .       PASS    AA=T;DP=73      GT:GQ:DP        0|1:100:20      0|0:65:21       0|0:78:27
+4      35282488        .       C       G       .       PASS    AA=G;DP=113     GT:GQ:DP        0|1:100:20      0|0:65:21       0|0:90:32
+12     41296328        .       T       C       .       PASS    AA=T;DP=121     GT:GQ:DP        0|1:100:20      0|0:65:22       0|0:100:36
+5      63759429        rs6875564       C       G       .       PASS    AA=G;DP=120     GT:GQ:DP        0|1:100:20      0|0:65:22       0|0:100:39
+3      166183640       rs6777477       T       G       .       PASS    AA=G;DP=77      GT:GQ:DP        0|1:100:20      0|0:68:21       0|0:100:38
+15     32809431        .       T       C       .       PASS    AA=T;DP=97      GT:GQ:DP        0|1:100:20      0|0:68:21       0|0:100:55
+5      128356081       rs3851463       T       C       .       PASS    AA=T;DP=101     GT:GQ:DP        0|1:100:20      0|0:68:21       0|0:100:58
+7      109591048       rs10282546      T       C       .       PASS    AA=C;DP=112     GT:GQ:DP        0|1:100:20      0|0:68:21       0|0:100:72
+5      164344728       rs17071161      T       G       .       PASS    AA=T;DP=116     GT:GQ:DP        0|1:100:20      0|0:68:21       0|0:100:75
+2      119153034       rs11901764      A       T       .       PASS    AA=A;DP=119     GT:GQ:DP        0|1:100:20      0|0:68:21       0|0:100:79
+1      88912379        rs1490735       C       T       .       PASS    AA=C;DP=76      GT:GQ:DP        0|1:100:20      0|0:68:21       0|0:75:25
+4      64840139        .       G       A       .       PASS    AA=G;DP=88      GT:GQ:DP        0|1:100:20      0|0:68:21       0|0:98:45
+9      118413044       .       C       T       .       PASS    AA=C;DP=97      GT:GQ:DP        0|1:100:20      0|0:68:22       0|0:100:55
+14     32865176        rs17100657      A       T       .       PASS    AA=A;DP=98      GT:GQ:DP        0|1:100:20      0|0:68:22       0|0:100:56
+9      22182936        rs57078142      C       T       .       PASS    AA=C;DP=100     GT:GQ:DP        0|1:100:20      0|0:68:22       0|0:100:59
+2      49988089        rs17039419      T       G       .       PASS    AA=T;DP=115     GT:GQ:DP        0|1:100:20      0|0:68:22       0|0:100:74
+4      69844990        .       C       T       .       PASS    AA=c;DP=123     GT:GQ:DP        0|1:100:20      0|0:68:22       0|0:100:79
+4      130442350       rs58299046      C       T       .       PASS    AA=c;DP=121     GT:GQ:DP        0|1:100:20      0|0:68:24       0|0:100:76
+7      80237774        .       C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        0|1:100:20      0|0:68:29       0|0:100:74
+8      4228976 rs7836107       G       A       .       PASS    AA=G;DP=81      GT:GQ:DP        0|1:100:20      0|0:6:16        0|0:98:46
+7      85500928        .       T       C       .       PASS    AA=T;DP=84      GT:GQ:DP        0|1:100:20      0|0:71:22       0|0:100:45
+15     24580724        .       A       T       .       PASS    AA=A;DP=100     GT:GQ:DP        0|1:100:20      0|0:71:22       0|0:100:51
+2      196033784       .       T       G       .       PASS    AA=T;DP=103     GT:GQ:DP        0|1:100:20      0|0:71:22       0|0:100:60
+7      20899268        .       C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        0|1:100:20      0|0:71:22       0|0:100:68
+2      214443405       rs13423895      A       G       .       PASS    AA=A;DP=86      GT:GQ:DP        0|1:100:20      0|0:71:22       0|0:99:33
+7      96399967        rs1207688       C       T       .       PASS    AA=T;DP=120     GT:GQ:DP        0|1:100:20      0|0:71:23       0|0:100:36
+3      104090179       rs1371943       C       T       .       PASS    AA=C;DP=97      GT:GQ:DP        0|1:100:20      0|0:71:23       0|0:100:55
+3      95446366        .       C       T       .       PASS    AA=C;DP=123     GT:GQ:DP        0|1:100:20      0|0:74:23       0|0:100:77
+1      55621042        rs12127401      C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        0|1:100:20      0|0:74:23       0|0:100:78
+11     104886986       rs4320923       T       C       .       PASS    AA=A;DP=93      GT:GQ:DP        0|1:100:20      0|0:74:25       0|0:100:46
+8      117728070       .       G       A       .       PASS    AA=G;DP=112     GT:GQ:DP        0|1:100:20      0|0:74:29       0|0:100:64
+7      8791785 rs13226663      C       T       .       PASS    AA=C;DP=93      GT:GQ:DP        0|1:100:20      0|0:77:24       0|0:100:49
+15     48058660        .       T       C       .       PASS    AA=T;DP=105     GT:GQ:DP        0|1:100:20      0|0:77:24       0|0:100:60
+2      188847730       rs11901438      T       C       .       PASS    AA=T;DP=116     GT:GQ:DP        0|1:100:20      0|0:77:24       0|0:100:67
+6      85510501        rs2015519       C       T       .       PASS    AA=C;DP=112     GT:GQ:DP        0|1:100:20      0|0:77:24       0|0:100:67
+19     8954773 rs7254772       G       A       .       PASS    AA=C;DP=119     GT:GQ:DP        0|1:100:20      0|0:77:24       0|0:100:73
+13     19652588        .       G       A       .       PASS    AA=G;DP=117     GT:GQ:DP        0|1:100:20      0|0:77:24       0|0:100:74
+10     32646044        rs12251894      T       C       .       PASS    AA=T;DP=118     GT:GQ:DP        0|1:100:20      0|0:77:24       0|0:96:32
+7      89500820        .       G       C       .       PASS    AA=G;DP=87      GT:GQ:DP        0|1:100:20      0|0:77:25       0|0:100:42
+16     47340710        rs36056294      A       T       .       PASS    AA=A;DP=95      GT:GQ:DP        0|1:100:20      0|0:77:25       0|0:100:48
+4      134125091       .       G       A       .       PASS    AA=G;DP=118     GT:GQ:DP        0|1:100:20      0|0:77:26       0|0:100:73
+6      164624776       rs794130        C       A       .       PASS    AA=C;DP=107     GT:GQ:DP        0|1:100:20      0|0:78:30       0|0:100:57
+6      91602275        rs1528982       A       C       .       PASS    AA=a;DP=127     GT:GQ:DP        0|1:100:20      0|0:78:36       0|0:100:72
+11     79810048        rs12277775      A       G       .       PASS    AA=G;DP=88      GT:GQ:DP        0|1:100:20      0|0:80:25       0|0:100:43
+8      127689756       rs4291233       T       C       .       PASS    AA=C;DP=102     GT:GQ:DP        0|1:100:20      0|0:80:26       0|0:100:55
+3      97699573        .       T       C       .       PASS    AA=T;DP=108     GT:GQ:DP        0|1:100:20      0|0:80:26       0|0:100:64
+2      74939716        .       T       G       .       PASS    AA=T;DP=114     GT:GQ:DP        0|1:100:20      0|0:83:26       0|0:100:66
+5      91637193        .       C       A       .       PASS    AA=C;DP=112     GT:GQ:DP        0|1:100:20      0|0:83:26       0|0:53:29
+1      216106308       rs11117958      G       A       .       PASS    AA=G;DP=111;HM2;HM3     GT:GQ:DP        0|1:100:20      0|0:83:27       0|0:100:65
+2      53781861        rs13407905      C       T       .       PASS    AA=C;DP=103     GT:GQ:DP        0|1:100:20      0|0:86:28       0|0:100:45
+14     24621940        rs11159074      A       T       .       PASS    AA=A;DP=87      GT:GQ:DP        0|1:100:20      0|0:89:28       0|0:90:30
+8      1221441 rs10100618      T       C       .       PASS    AA=T;DP=123     GT:GQ:DP        0|1:100:20      0|0:92:29       0|0:100:74
+6      20688175        rs6927481       C       A       .       PASS    AA=A;DP=145     GT:GQ:DP        0|1:100:20      0|0:95:30       0|0:100:88
+14     35523918        rs17103727      G       A       .       PASS    AA=G;DP=138     GT:GQ:DP        0|1:100:20      0|0:95:31       0|0:100:62
+17     6470294 .       G       A       .       PASS    AA=A;DP=115     GT:GQ:DP        0|1:100:20      0|0:95:32       0|0:100:63
+1      12351625        rs6670248       A       G       .       PASS    AA=A;DP=104;HM2;HM3     GT:GQ:DP        0|1:100:20      0|0:98:31       0|0:100:52
+5      141378594       rs12658272      A       C       .       PASS    AA=A;DP=137     GT:GQ:DP        0|1:100:20      0|0:98:31       0|0:100:85
+20     52233493        rs6023004       C       T       .       PASS    AA=T;DP=110     GT:GQ:DP        0|1:100:20      0|0:9:19        0|0:100:72
+5      105559379       rs10077165      G       A       .       PASS    AA=g;DP=110     GT:GQ:DP        0|1:100:20      0|1:100:14      0|0:100:74
+10     66698438        .       G       A       .       PASS    AA=G;DP=92      GT:GQ:DP        0|1:100:20      0|1:100:15      0|0:100:57
+11     8760687 rs6484423       C       T       .       PASS    AA=T;DP=93      GT:GQ:DP        0|1:100:20      0|1:100:16      0|0:100:57
+10     67894892        rs2441727       A       G       .       PASS    AA=G;DP=101     GT:GQ:DP        0|1:100:20      0|1:100:16      0|0:100:64
+4      47147837        rs58773051      C       T       .       PASS    AA=T;DP=106     GT:GQ:DP        0|1:100:20      0|1:100:17      0|0:100:71
+8      8828188 .       G       A       .       PASS    AA=G;DP=102     GT:GQ:DP        0|1:100:20      0|1:100:20      0|0:100:60
+5      3374396 rs7446318       C       T       .       PASS    AA=c;DP=111     GT:GQ:DP        0|1:100:20      0|1:100:20      0|0:87:31
+7      13747009        rs4719379       T       C       .       PASS    AA=T;DP=121     GT:GQ:DP        0|1:100:20      0|1:100:21      0|0:100:37
+10     120726359       .       A       T       .       PASS    AA=a;DP=111     GT:GQ:DP        0|1:100:20      0|1:100:21      0|0:100:71
+11     29186047        rs2933157       A       G       .       PASS    AA=A;DP=110     GT:GQ:DP        0|1:100:20      0|1:100:21      0|0:100:72
+8      14295948        rs7831148       G       T       .       PASS    AA=T;DP=97      GT:GQ:DP        0|1:100:20      0|1:100:22      0|0:100:55
+6      47945605        rs1328976       T       C       .       PASS    AA=C;DP=82      GT:GQ:DP        0|1:100:20      0|1:100:24      0|0:99:39
+1      188399765       rs10920655      T       C       .       PASS    AA=T;DP=103;HM2 GT:GQ:DP        0|1:100:20      0|1:100:25      0|0:100:56
+18     57472717        rs7239072       C       T       .       PASS    AA=T;DP=115     GT:GQ:DP        0|1:100:20      0|1:100:25      0|0:100:70
+2      159171140       rs10206833      G       A       .       PASS    AA=A;DP=115     GT:GQ:DP        0|1:100:20      0|1:100:25      0|0:100:72
+8      13891464        rs7845130       C       T       .       PASS    AA=C;DP=121     GT:GQ:DP        0|1:100:20      0|1:100:28      0|0:84:29
+2      188036149       rs7600570       A       G       .       PASS    AA=A;DP=128     GT:GQ:DP        0|1:100:20      0|1:100:31      0|0:100:76
+6      39757545        rs302563        C       T       .       PASS    AA=c;DP=124     GT:GQ:DP        0|1:100:20      0|1:100:31      0|0:100:76
+4      27838282        .       C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        0|1:100:20      0|1:100:32      0|0:100:68
+4      57943300        rs6830934       A       G       .       PASS    AA=A;DP=118     GT:GQ:DP        0|1:100:20      0|1:100:35      0|0:100:64
+4      177749159       rs7654038       C       A       .       PASS    AA=C;DP=70      GT:GQ:DP        0|1:100:20      0|1:40:12       0|0:53:30
+1      208952898       rs12048359      G       C       .       PASS    AA=g;DP=82;HM2  GT:GQ:DP        0|1:100:20      0|1:64:16       0|0:98:45
+4      27544609        rs12332055      A       G       .       PASS    AA=A;DP=87      GT:GQ:DP        0|1:100:20      0|1:67:13       0|0:100:55
+3      71743262        rs1717281       G       A       .       PASS    AA=G;DP=124     GT:GQ:DP        0|1:100:20      0|1:6:25        0|0:100:82
+18     26609508        rs28510557      C       T       .       PASS    AA=T;DP=73      GT:GQ:DP        0|1:100:20      0|1:70:9        0|0:100:43
+8      58222329        rs6999376       C       T       .       PASS    AA=C;DP=109     GT:GQ:DP        0|1:100:20      0|1:71:22       0|0:100:67
+6      190096  rs6904506       T       C       .       PASS    AA=.;DP=122     GT:GQ:DP        0|1:100:20      0|1:71:25       0|0:100:65
+5      30681358        rs16900129      T       C       .       PASS    AA=T;DP=92      GT:GQ:DP        0|1:100:20      0|1:72:19       0|0:100:52
+2      204037156       .       T       C       .       PASS    AA=T;DP=116     GT:GQ:DP        0|1:100:20      0|1:74:17       0|0:100:81
+8      3187489 rs17080059      G       A       .       PASS    AA=A;DP=85      GT:GQ:DP        0|1:100:20      0|1:83:16       0|0:100:47
+14     47086454        .       G       A       .       PASS    AA=g;DP=117     GT:GQ:DP        0|1:100:20      0|1:87:20       0|0:100:78
+1      188266220       rs10920366      T       C       .       PASS    AA=C;DP=118     GT:GQ:DP        0|1:100:20      0|1:91:24       0|0:100:73
+21     26197209        rs2829979       G       A       .       PASS    AA=A;DP=86      GT:GQ:DP        0|1:100:20      0|1:93:12       0|0:100:53
+12     103268518       rs10047589      C       T       .       PASS    AA=c;DP=127     GT:GQ:DP        0|1:100:20      0|1:97:27       0|0:100:81
+15     60715560        rs8043198       C       T       .       PASS    AA=C;DP=113     GT:GQ:DP        0|1:100:20      1|1:19:18       0|1:100:73
+3      99649136        rs6798484       T       G       .       PASS    AA=G;DP=110     GT:GQ:DP        0|1:100:20      1|1:21:19       0|1:100:71
+8      129409432       rs4129634       T       C       .       PASS    AA=T;DP=118     GT:GQ:DP        0|1:100:20      1|1:24:20       0|1:100:79
+6      101442603       rs846798        G       C       .       PASS    AA=C;DP=94      GT:GQ:DP        0|1:100:20      1|1:30:12       0|1:100:62
+7      49085958        rs4560745       G       T       .       PASS    AA=G;DP=106     GT:GQ:DP        0|1:100:20      1|1:30:22       0|1:100:64
+3      179357315       rs766114        C       T       .       PASS    AA=C;DP=86      GT:GQ:DP        0|1:100:20      1|1:33:12       0|1:100:55
+12     31507827        rs7135856       T       C       .       PASS    AA=t;DP=110     GT:GQ:DP        0|1:100:20      1|1:33:12       0|1:100:78
+11     2138580 rs5506  A       G       .       PASS    AA=G;DP=74      GT:GQ:DP        0|1:100:20      1|1:36:13       0|1:100:32
+4      67327141        rs1545429       G       A       .       PASS    AA=A;DP=90      GT:GQ:DP        0|1:100:20      1|1:36:13       0|1:100:54
+7      256167  rs13308570      G       A       .       PASS    AA=.;DP=98      GT:GQ:DP        0|1:100:20      1|1:39:14       0|1:100:63
+6      77339224        rs9352351       T       C       .       PASS    AA=C;DP=112     GT:GQ:DP        0|1:100:20      1|1:41:26       0|1:100:64
+13     61304584        rs9539326       A       G       .       PASS    AA=G;DP=79      GT:GQ:DP        0|1:100:20      1|1:42:15       0|1:100:44
+12     37667047        rs11170238      A       G       .       PASS    AA=A;DP=92      GT:GQ:DP        0|1:100:20      1|1:42:18       0|1:100:48
+11     55874901        rs1586004       T       C       .       PASS    AA=C;DP=98      GT:GQ:DP        0|1:100:20      1|1:45:16       0|1:100:53
+2      185615968       rs263768        C       G       .       PASS    AA=G;DP=94      GT:GQ:DP        0|1:100:20      1|1:45:16       0|1:100:63
+2      75438175        rs62148380      G       A       .       PASS    AA=A;DP=90      GT:GQ:DP        0|1:100:20      1|1:45:17       0|1:100:37
+14     21438837        rs8014496       T       C       .       PASS    AA=C;DP=94      GT:GQ:DP        0|1:100:20      1|1:48:17       0|1:100:60
+10     118011030       rs4525139       C       T       .       PASS    AA=T;DP=104     GT:GQ:DP        0|1:100:20      1|1:48:18       0|1:100:69
+4      65437821        rs13138012      C       A       .       PASS    AA=A;DP=97      GT:GQ:DP        0|1:100:20      1|1:49:24       0|1:100:54
+2      56466963        rs11884313      G       A       .       PASS    AA=A;DP=80      GT:GQ:DP        0|1:100:20      1|1:51:18       0|1:100:32
+7      88383930        rs7805966       G       A       .       PASS    AA=A;DP=92      GT:GQ:DP        0|1:100:20      1|1:51:18       0|1:100:51
+1      69675007        rs3902680       C       T       .       PASS    AA=C;DP=106     GT:GQ:DP        0|1:100:20      1|1:51:19       0|1:100:70
+18     67184365        rs334438        C       T       .       PASS    AA=C;DP=90      GT:GQ:DP        0|1:100:20      1|1:51:20       0|1:100:49
+4      34199385        rs10213110      A       G       .       PASS    AA=A;DP=98      GT:GQ:DP        0|1:100:20      1|1:54:19       0|1:100:61
+3      152901045       rs9849956       A       C       .       PASS    AA=C;DP=111     GT:GQ:DP        0|1:100:20      1|1:55:31       0|1:100:62
+11     80789967        rs729143        C       T       .       PASS    AA=T;DP=110     GT:GQ:DP        0|1:100:20      1|1:57:20       0|1:100:69
+18     68087084        rs10871698      T       C       .       PASS    AA=C;DP=100     GT:GQ:DP        0|1:100:20      1|1:57:21       0|1:100:60
+10     19707109        rs7898123       A       G       .       PASS    AA=A;DP=119     GT:GQ:DP        0|1:100:20      1|1:57:21       0|1:100:79
+11     19231504        rs813795        C       T       .       PASS    AA=C;DP=116     GT:GQ:DP        0|1:100:20      1|1:57:23       0|1:100:68
+3      164369849       rs12638904      A       G       .       PASS    AA=A;DP=89      GT:GQ:DP        0|1:100:20      1|1:57:28       0|1:100:41
+16     7655109 rs8064206       T       C       .       PASS    AA=T;DP=119     GT:GQ:DP        0|1:100:20      1|1:60:22       0|1:100:63
+6      81055416        rs636361        G       A       .       PASS    AA=A;DP=117     GT:GQ:DP        0|1:100:20      1|1:60:22       0|1:100:73
+8      69142363        rs2890420       T       C       .       PASS    AA=T;DP=105     GT:GQ:DP        0|1:100:20      1|1:60:23       0|1:100:61
+8      79653358        rs61066660      G       T       .       PASS    AA=T;DP=89      GT:GQ:DP        0|1:100:20      1|1:66:24       0|1:100:46
+6      121309841       rs7747541       A       G       .       PASS    AA=N;DP=88      GT:GQ:DP        0|1:100:20      1|1:69:24       0|1:100:42
+6      47859439        rs1329545       A       G       .       PASS    AA=G;DP=135     GT:GQ:DP        0|1:100:20      1|1:75:27       0|1:100:37
+2      215808331       rs7581453       C       T       .       PASS    AA=C;DP=101     GT:GQ:DP        0|1:100:20      1|1:78:27       0|1:100:55
+16     85704864        rs7206873       C       T       .       PASS    AA=C;DP=106     GT:GQ:DP        0|1:100:20      1|1:84:29       0|1:100:48
+6      148800310       .       G       A       .       PASS    AA=g;DP=117     GT:GQ:DP        0|1:100:21      0|0:100:32      0|0:100:64
+1      108268909       rs345306        T       G       .       PASS    AA=t;DP=128;HM2;HM3     GT:GQ:DP        0|1:100:21      0|0:100:34      0|0:100:70
+7      86809865        .       C       T       .       PASS    AA=T;DP=111     GT:GQ:DP        0|1:100:21      0|0:100:35      0|0:100:56
+14     53342589        rs10498459      G       T       .       PASS    AA=G;DP=116     GT:GQ:DP        0|1:100:21      0|0:100:37      0|0:100:59
+14     27493174        .       A       T       .       PASS    AA=A;DP=135     GT:GQ:DP        0|1:100:21      0|0:100:39      0|0:100:75
+21     45093193        .       G       C       .       PASS    AA=G;DP=117     GT:GQ:DP        0|1:100:21      0|0:16:14       0|0:100:34
+2      8979838 .       T       C       .       PASS    AA=T;DP=111     GT:GQ:DP        0|1:100:21      0|0:18:15       0|0:100:76
+4      156864963       rs13139571      C       A       .       PASS    AA=A;DP=94      GT:GQ:DP        0|1:100:21      0|0:20:15       0|0:100:56
+13     66558065        .       C       A       .       PASS    AA=A;DP=97      GT:GQ:DP        0|1:100:21      0|0:22:17       0|0:100:59
+11     718348  rs11246290      C       T       .       PASS    AA=C;DP=75      GT:GQ:DP        0|1:100:21      0|0:26:7        0|0:100:38
+3      27743699        .       T       A       .       PASS    AA=T;DP=97      GT:GQ:DP        0|1:100:21      0|0:29:19       0|0:100:59
+3      85589738        .       C       T       .       PASS    AA=c;DP=95      GT:GQ:DP        0|1:100:21      0|0:32:13       0|0:100:57
+1      22952542        .       T       C       .       PASS    AA=C;DP=84      GT:GQ:DP        0|1:100:21      0|0:32:9        0|0:100:55
+14     28066082        rs1957089       C       A       .       PASS    AA=C;DP=67      GT:GQ:DP        0|1:100:21      0|0:32:9        0|0:42:28
+18     4258454 .       A       G       .       PASS    AA=G;DP=74      GT:GQ:DP        0|1:100:21      0|0:35:10       0|0:100:43
+10     80425154        rs61331747      G       A       .       PASS    AA=G;DP=101     GT:GQ:DP        0|1:100:21      0|0:35:10       0|0:100:70
+8      11496837        .       T       A       .       PASS    AA=T;DP=76      GT:GQ:DP        0|1:100:21      0|0:35:11       0|0:100:45
+8      42793695        rs7825957       C       T       .       PASS    AA=C;DP=66      GT:GQ:DP        0|1:100:21      0|0:35:11       0|0:99:35
+19     19211635        .       T       C       .       PASS    AA=t;DP=100     GT:GQ:DP        0|1:100:21      0|0:35:12       0|0:100:71
+2      133894871       rs10204527      G       T       .       PASS    AA=T;DP=116     GT:GQ:DP        0|1:100:21      0|0:35:21       0|0:100:71
+7      123056794       .       A       T       .       PASS    AA=A;DP=88      GT:GQ:DP        0|1:100:21      0|0:37:21       0|0:100:47
+1      196121101       .       C       A       .       PASS    AA=C;DP=111     GT:GQ:DP        0|1:100:21      0|0:38:11       0|0:100:78
+6      148710393       rs4279457       C       A       .       PASS    AA=A;DP=98      GT:GQ:DP        0|1:100:21      0|0:38:18       0|0:100:58
+11     133785336       rs55986667      A       C       .       PASS    AA=C;DP=126     GT:GQ:DP        0|1:100:21      0|0:38:22       0|0:100:83
+2      119408890       .       C       A       .       PASS    AA=C;DP=118     GT:GQ:DP        0|1:100:21      0|0:40:21       0|0:92:37
+13     97532869        rs285062        G       T       .       PASS    AA=T;DP=122     GT:GQ:DP        0|1:100:21      0|0:40:29       0|0:100:71
+1      4895035 rs11591047      T       C       .       PASS    AA=N;DP=93      GT:GQ:DP        0|1:100:21      0|0:41:12       0|0:100:53
+2      44380925        .       T       A       .       PASS    AA=T;DP=119     GT:GQ:DP        0|1:100:21      0|0:41:12       0|0:100:82
+8      97219274        .       C       T       .       PASS    AA=C;DP=97      GT:GQ:DP        0|1:100:21      0|0:41:13       0|0:100:62
+6      69702308        rs9294815       T       C       .       PASS    AA=T;DP=119     GT:GQ:DP        0|1:100:21      0|0:42:18       0|0:96:32
+9      12349235        .       C       A       .       PASS    AA=C;DP=97      GT:GQ:DP        0|1:100:21      0|0:42:21       0|0:100:56
+16     61106195        rs28673674      A       G       .       PASS    AA=A;DP=82      GT:GQ:DP        0|1:100:21      0|0:43:18       0|0:100:44
+12     57093140        .       A       G       .       PASS    AA=A;DP=120     GT:GQ:DP        0|1:100:21      0|0:43:24       0|0:100:76
+4      3675257 rs55924244      G       A       .       PASS    AA=G;DP=79      GT:GQ:DP        0|1:100:21      0|0:44:13       0|0:100:45
+15     78139774        .       G       C       .       PASS    AA=G;DP=95      GT:GQ:DP        0|1:100:21      0|0:44:13       0|0:100:64
+4      176381202       .       G       A       .       PASS    AA=G;DP=99      GT:GQ:DP        0|1:100:21      0|0:44:13       0|0:100:69
+17     72469670        .       G       T       .       PASS    AA=N;DP=122     GT:GQ:DP        0|1:100:21      0|0:44:13       0|0:100:89
+1      118832086       rs1146310       G       A       .       PASS    AA=G;DP=120;HM2 GT:GQ:DP        0|1:100:21      0|0:44:14       0|0:100:42
+9      37320419        .       T       G       .       PASS    AA=T;DP=78      GT:GQ:DP        0|1:100:21      0|0:44:14       0|0:100:46
+17     74965586        rs884023        T       C       .       PASS    AA=C;DP=121     GT:GQ:DP        0|1:100:21      0|0:44:14       0|0:100:89
+9      32738823        .       C       T       .       PASS    AA=C;DP=93      GT:GQ:DP        0|1:100:21      0|0:44:15       0|0:100:59
+4      79718460        rs6837662       A       G       .       PASS    AA=G;DP=92      GT:GQ:DP        0|1:100:21      0|0:44:18       0|0:100:55
+2      154399423       rs10497137      T       C       .       PASS    AA=T;DP=109     GT:GQ:DP        0|1:100:21      0|0:45:18       0|0:76:33
+12     5855732 rs6489666       C       G       .       PASS    AA=C;DP=112     GT:GQ:DP        0|1:100:21      0|0:46:21       0|0:100:70
+13     21224270        .       C       T       .       PASS    AA=T;DP=97      GT:GQ:DP        0|1:100:21      0|0:46:22       0|0:100:52
+4      157543550       rs13149529      C       T       .       PASS    AA=C;DP=89      GT:GQ:DP        0|1:100:21      0|0:47:14       0|0:100:53
+7      41917841        rs61039559      T       C       .       PASS    AA=T;DP=110     GT:GQ:DP        0|1:100:21      0|0:47:14       0|0:100:71
+9      34682506        rs10814132      G       T       .       PASS    AA=G;DP=113     GT:GQ:DP        0|1:100:21      0|0:47:14       0|0:100:75
+4      8536046 rs2631741       G       C       .       PASS    AA=-;DP=79      GT:GQ:DP        0|1:100:21      0|0:47:15       0|0:100:43
+11     39661021        .       G       A       .       PASS    AA=G;DP=96      GT:GQ:DP        0|1:100:21      0|0:47:15       0|0:100:58
+4      41716100        .       C       A       .       PASS    AA=C;DP=111     GT:GQ:DP        0|1:100:21      0|0:47:21       0|0:100:63
+6      144947518       .       C       T       .       PASS    AA=C;DP=90      GT:GQ:DP        0|1:100:21      0|0:48:19       0|0:100:51
+10     21383584        rs16921489      T       C       .       PASS    AA=C;DP=128     GT:GQ:DP        0|1:100:21      0|0:49:21       0|0:97:44
+17     10846156        rs62060870      C       T       .       PASS    AA=C;DP=124     GT:GQ:DP        0|1:100:21      0|0:49:26       0|0:100:81
+10     123793727       rs7095430       G       A       .       PASS    AA=C;DP=136     GT:GQ:DP        0|1:100:21      0|0:49:26       0|0:100:90
+16     23479597        rs8048646       T       C       .       PASS    AA=T;DP=84      GT:GQ:DP        0|1:100:21      0|0:50:15       0|0:100:48
+4      70263471        .       C       T       .       PASS    AA=.;DP=84      GT:GQ:DP        0|1:100:21      0|0:50:15       0|0:100:48
+20     13781064        rs6042386       T       C       .       PASS    AA=T;DP=87      GT:GQ:DP        0|1:100:21      0|0:50:15       0|0:100:52
+7      63875798        rs11771424      C       T       .       PASS    AA=C;DP=84      GT:GQ:DP        0|1:100:21      0|0:50:15       0|0:100:52
+10     130340801       rs12258048      A       G       .       PASS    AA=A;DP=101     GT:GQ:DP        0|1:100:21      0|0:50:15       0|0:100:64
+10     104903860       rs7067970       C       T       .       PASS    AA=T;DP=105     GT:GQ:DP        0|1:100:21      0|0:50:15       0|0:100:68
+19     13053297        rs8104665       T       A       .       PASS    AA=T;DP=109     GT:GQ:DP        0|1:100:21      0|0:50:15       0|0:100:76
+1      24028511        rs35385477      G       A       .       PASS    AA=G;DP=78;HM3  GT:GQ:DP        0|1:100:21      0|0:50:16       0|0:100:39
+7      87565379        .       G       A       .       PASS    AA=G;DP=89      GT:GQ:DP        0|1:100:21      0|0:50:16       0|0:100:52
+10     114217911       .       G       A       .       PASS    AA=G;DP=105     GT:GQ:DP        0|1:100:21      0|0:50:16       0|0:100:68
+20     61930912        rs11697257      G       C       .       PASS    AA=C;DP=118     GT:GQ:DP        0|1:100:21      0|0:51:21       0|0:100:80
+8      52906512        .       C       T       .       PASS    AA=C;DP=131     GT:GQ:DP        0|1:100:21      0|0:52:17       0|0:100:42
+1      178139339       .       C       T       .       PASS    AA=C;DP=88      GT:GQ:DP        0|1:100:21      0|0:53:16       0|0:100:50
+10     5724856 .       G       C       .       PASS    AA=G;DP=95      GT:GQ:DP        0|1:100:21      0|0:53:16       0|0:100:60
+18     68360954        .       G       A       .       PASS    AA=G;DP=104     GT:GQ:DP        0|1:100:21      0|0:53:16       0|0:100:64
+2      241034174       .       C       A       .       PASS    AA=A;DP=107     GT:GQ:DP        0|1:100:21      0|0:53:16       0|0:100:69
+7      100497867       rs13228919      G       A       .       PASS    AA=G;DP=113     GT:GQ:DP        0|1:100:21      0|0:53:16       0|0:100:75
+10     63295529        rs2588928       T       C       .       PASS    AA=T;DP=122     GT:GQ:DP        0|1:100:21      0|0:53:16       0|0:94:37
+5      33881325        rs2548017       G       A       .       PASS    AA=G;DP=95      GT:GQ:DP        0|1:100:21      0|0:53:17       0|0:100:42
+3      105483673       rs2398982       C       T       .       PASS    AA=-;DP=102     GT:GQ:DP        0|1:100:21      0|0:53:17       0|0:100:65
+6      137185911       .       G       C       .       PASS    AA=G;DP=94      GT:GQ:DP        0|1:100:21      0|0:53:17       0|0:96:44
+4      112023723       .       G       A       .       PASS    AA=C;DP=105     GT:GQ:DP        0|1:100:21      0|0:53:18       0|0:100:64
+5      104543554       rs11957264      T       C       .       PASS    AA=t;DP=104     GT:GQ:DP        0|1:100:21      0|0:54:22       0|0:100:58
+17     65652836        rs8077760       T       C       .       PASS    AA=T;DP=80      GT:GQ:DP        0|1:100:21      0|0:56:17       0|0:100:41
+4      162675327       .       T       C       .       PASS    AA=T;DP=92      GT:GQ:DP        0|1:100:21      0|0:56:17       0|0:100:51
+10     62462305        .       T       C       .       PASS    AA=T;DP=91      GT:GQ:DP        0|1:100:21      0|0:56:17       0|0:100:54
+6      122109112       .       T       C       .       PASS    AA=T;DP=95      GT:GQ:DP        0|1:100:21      0|0:56:17       0|0:100:57
+5      41286845        .       T       A       .       PASS    AA=T;DP=96      GT:GQ:DP        0|1:100:21      0|0:56:17       0|0:100:58
+15     71989893        rs28502586      C       A       .       PASS    AA=A;DP=102     GT:GQ:DP        0|1:100:21      0|0:56:17       0|0:100:62
+6      130447016       rs17058340      A       C       .       PASS    AA=A;DP=108     GT:GQ:DP        0|1:100:21      0|0:56:17       0|0:100:70
+8      108391671       .       G       T       .       PASS    AA=G;DP=109     GT:GQ:DP        0|1:100:21      0|0:56:17       0|0:100:70
+2      59405770        rs7425537       C       T       .       PASS    AA=T;DP=94      GT:GQ:DP        0|1:100:21      0|0:56:18       0|0:100:56
+2      142614727       rs10207741      G       A       .       PASS    AA=G;DP=100     GT:GQ:DP        0|1:100:21      0|0:56:18       0|0:100:64
+3      189880636       .       T       C       .       PASS    AA=T;DP=106     GT:GQ:DP        0|1:100:21      0|0:56:18       0|0:100:70
+16     7333082 .       T       C       .       PASS    AA=T;DP=85      GT:GQ:DP        0|1:100:21      0|0:56:19       0|0:100:45
+11     25464537        .       G       A       .       PASS    AA=G;DP=99      GT:GQ:DP        0|1:100:21      0|0:56:19       0|0:100:59
+5      129109263       rs6595922       C       T       .       PASS    AA=C;DP=112     GT:GQ:DP        0|1:100:21      0|0:56:19       0|0:100:75
+9      116692674       rs4979470       G       A       .       PASS    AA=G;DP=130     GT:GQ:DP        0|1:100:21      0|0:56:23       0|0:100:62
+7      147155499       rs10246029      C       T       .       PASS    AA=c;DP=103     GT:GQ:DP        0|1:100:21      0|0:58:29       0|0:100:52
+4      66271089        .       A       G       .       PASS    AA=A;DP=75      GT:GQ:DP        0|1:100:21      0|0:59:18       0|0:100:36
+20     33766287        rs2425086       G       A       .       PASS    AA=G;DP=75      GT:GQ:DP        0|1:100:21      0|0:59:18       0|0:100:37
+10     83075290        rs12414846      T       G       .       PASS    AA=T;DP=78      GT:GQ:DP        0|1:100:21      0|0:59:18       0|0:100:39
+4      97191818        rs36048142      T       A       .       PASS    AA=T;DP=85      GT:GQ:DP        0|1:100:21      0|0:59:18       0|0:100:45
+10     109836512       .       T       C       .       PASS    AA=T;DP=87      GT:GQ:DP        0|1:100:21      0|0:59:18       0|0:100:46
+6      84646388        rs9353146       T       C       .       PASS    AA=T;DP=101     GT:GQ:DP        0|1:100:21      0|0:59:18       0|0:100:63
+2      104390791       rs13397267      G       A       .       PASS    AA=G;DP=106     GT:GQ:DP        0|1:100:21      0|0:59:18       0|0:100:67
+9      8438416 .       G       A       .       PASS    AA=G;DP=108     GT:GQ:DP        0|1:100:21      0|0:59:18       0|0:100:68
+20     24665674        rs2424638       T       C       .       PASS    AA=C;DP=117     GT:GQ:DP        0|1:100:21      0|0:59:18       0|0:100:76
+14     41843965        rs56104966      T       C       .       PASS    AA=T;DP=78      GT:GQ:DP        0|1:100:21      0|0:59:18       0|0:87:29
+14     27210847        .       T       G       .       PASS    AA=T;DP=115     GT:GQ:DP        0|1:100:21      0|0:59:18       0|0:96:32
+2      106076211       .       A       G       .       PASS    AA=A;DP=82      GT:GQ:DP        0|1:100:21      0|0:59:18       0|0:99:33
+10     19956082        .       C       G       .       PASS    AA=C;DP=78      GT:GQ:DP        0|1:100:21      0|0:59:19       0|0:100:34
+10     124176961       .       T       C       .       PASS    AA=T;DP=121     GT:GQ:DP        0|1:100:21      0|0:59:19       0|0:100:41
+4      28887496        .       G       C       .       PASS    AA=G;DP=84      GT:GQ:DP        0|1:100:21      0|0:59:19       0|0:100:45
+14     92217253        rs12890223      G       T       .       PASS    AA=G;DP=114     GT:GQ:DP        0|1:100:21      0|0:59:19       0|0:100:71
+4      127656689       .       G       A       .       PASS    AA=G;DP=89      GT:GQ:DP        0|1:100:21      0|0:59:26       0|0:36:30
+4      35233041        rs35281970      C       A       .       PASS    AA=C;DP=127     GT:GQ:DP        0|1:100:21      0|0:60:26       0|0:100:78
+4      134158521       .       G       A       .       PASS    AA=A;DP=96      GT:GQ:DP        0|1:100:21      0|0:61:22       0|0:100:55
+2      79757312        rs17017514      G       A       .       PASS    AA=G;DP=120     GT:GQ:DP        0|1:100:21      0|0:62:19       0|0:100:35
+11     15498440        .       T       C       .       PASS    AA=T;DP=80      GT:GQ:DP        0|1:100:21      0|0:62:19       0|0:100:40
+4      41766210        rs28498032      T       C       .       PASS    AA=T;DP=92      GT:GQ:DP        0|1:100:21      0|0:62:19       0|0:100:52
+21     32986644        .       G       A       .       PASS    AA=G;DP=94      GT:GQ:DP        0|1:100:21      0|0:62:19       0|0:100:55
+2      101569996       .       A       G       .       PASS    AA=A;DP=97      GT:GQ:DP        0|1:100:21      0|0:62:19       0|0:100:57
+15     65554736        .       G       A       .       PASS    AA=G;DP=101     GT:GQ:DP        0|1:100:21      0|0:62:19       0|0:100:61
+1      184060938       rs4651288       G       T       .       PASS    AA=G;DP=108;HM2 GT:GQ:DP        0|1:100:21      0|0:62:19       0|0:100:69
+3      119668480       .       G       A       .       PASS    AA=G;DP=113     GT:GQ:DP        0|1:100:21      0|0:62:19       0|0:100:76
+9      133761920       rs12337500      A       T       .       PASS    AA=A;DP=87      GT:GQ:DP        0|1:100:21      0|0:62:19       0|0:70:34
+17     17196265        .       C       T       .       PASS    AA=C;DP=127     GT:GQ:DP        0|1:100:21      0|0:62:20       0|0:100:87
+16     56488550        .       T       A       .       PASS    AA=T;DP=82      GT:GQ:DP        0|1:100:21      0|0:65:20       0|0:100:36
+1      104281610       .       G       T       .       PASS    AA=G;DP=86      GT:GQ:DP        0|1:100:21      0|0:65:20       0|0:100:48
+13     21125010        rs866675        A       G       .       PASS    AA=G;DP=100     GT:GQ:DP        0|1:100:21      0|0:65:20       0|0:100:59
+11     104724043       .       T       C       .       PASS    AA=T;DP=103     GT:GQ:DP        0|1:100:21      0|0:65:20       0|0:100:62
+1      91573450        .       C       A       .       PASS    AA=C;DP=104     GT:GQ:DP        0|1:100:21      0|0:65:20       0|0:100:66
+8      84533470        rs6989911       C       G       .       PASS    AA=C;DP=82      GT:GQ:DP        0|1:100:21      0|0:65:20       0|0:81:28
+3      107408557       .       C       T       .       PASS    AA=C;DP=123     GT:GQ:DP        0|1:100:21      0|0:65:21       0|0:100:41
+14     23163985        .       T       C       .       PASS    AA=T;DP=108     GT:GQ:DP        0|1:100:21      0|0:65:21       0|0:100:66
+6      101656536       rs9498507       G       A       .       PASS    AA=A;DP=114     GT:GQ:DP        0|1:100:21      0|0:65:21       0|0:100:73
+3      191206000       .       C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        0|1:100:21      0|0:65:22       0|0:100:66
+1      70296253        rs4650017       T       C       .       PASS    AA=C;DP=114     GT:GQ:DP        0|1:100:21      0|0:65:22       0|0:100:73
+6      129833134       rs9372932       G       C       .       PASS    AA=G;DP=130     GT:GQ:DP        0|1:100:21      0|0:65:22       0|0:100:91
+2      145793248       rs13005641      C       G       .       PASS    AA=C;DP=113     GT:GQ:DP        0|1:100:21      0|0:65:24       0|0:100:67
+17     44034581        .       G       A       .       PASS    AA=G;DP=118     GT:GQ:DP        0|1:100:21      0|0:68:21       0|0:100:38
+2      2694361 rs56802454      T       G       .       PASS    AA=T;DP=137     GT:GQ:DP        0|1:100:21      0|0:68:21       0|0:100:41
+10     59104533        rs7098459       G       A       .       PASS    AA=G;DP=87      GT:GQ:DP        0|1:100:21      0|0:68:21       0|0:100:45
+4      67084941        rs17787973      A       G       .       PASS    AA=A;DP=101     GT:GQ:DP        0|1:100:21      0|0:68:21       0|0:100:62
+6      20928674        .       A       G       .       PASS    AA=A;DP=104     GT:GQ:DP        0|1:100:21      0|0:68:21       0|0:100:62
+5      78595908        .       C       T       .       PASS    AA=C;DP=109     GT:GQ:DP        0|1:100:21      0|0:68:21       0|0:100:68
+10     108007120       rs10884281      G       A       .       PASS    AA=g;DP=111     GT:GQ:DP        0|1:100:21      0|0:68:21       0|0:100:69
+11     124856209       .       T       C       .       PASS    AA=T;DP=112     GT:GQ:DP        0|1:100:21      0|0:68:21       0|0:100:72
+12     18149904        rs11043863      T       C       .       PASS    AA=T;DP=124     GT:GQ:DP        0|1:100:21      0|0:68:21       0|0:100:75
+18     40622032        rs7235574       G       A       .       PASS    AA=g;DP=115     GT:GQ:DP        0|1:100:21      0|0:68:21       0|0:100:75
+13     84527080        .       G       A       .       PASS    AA=G;DP=90      GT:GQ:DP        0|1:100:21      0|0:68:22       0|0:100:48
+3      76966587        .       C       G       .       PASS    AA=C;DP=98      GT:GQ:DP        0|1:100:21      0|0:68:22       0|0:100:55
+18     67287109        rs4891923       A       C       .       PASS    AA=C;DP=98      GT:GQ:DP        0|1:100:21      0|0:68:22       0|0:100:57
+10     60288562        rs12256857      C       T       .       PASS    AA=T;DP=119     GT:GQ:DP        0|1:100:21      0|0:68:23       0|0:100:73
+3      62995182        .       G       T       .       PASS    AA=G;DP=134     GT:GQ:DP        0|1:100:21      0|0:68:27       0|0:100:83
+7      34011589        rs10256568      A       T       .       PASS    AA=-;DP=103     GT:GQ:DP        0|1:100:21      0|0:69:23       0|0:100:58
+13     46560794        .       C       T       .       PASS    AA=T;DP=110     GT:GQ:DP        0|1:100:21      0|0:71:22       0|0:100:56
+18     4797547 rs56323433      G       C       .       PASS    AA=G;DP=118     GT:GQ:DP        0|1:100:21      0|0:71:22       0|0:100:73
+9      125511009       .       T       C       .       PASS    AA=T;DP=121     GT:GQ:DP        0|1:100:21      0|0:71:22       0|0:100:80
+11     110470325       rs1400759       A       C       .       PASS    AA=A;DP=123     GT:GQ:DP        0|1:100:21      0|0:71:22       0|0:75:25
+1      42255852        rs6600395       G       A       .       PASS    AA=G;DP=126;HM2 GT:GQ:DP        0|1:100:21      0|0:71:23       0|0:100:40
+13     85904086        rs4772490       G       A       .       PASS    AA=A;DP=96      GT:GQ:DP        0|1:100:21      0|0:71:23       0|0:100:54
+6      46121345        rs9367231       A       G       .       PASS    AA=A;DP=98      GT:GQ:DP        0|1:100:21      0|0:71:23       0|0:100:55
+7      153225859       rs12672305      G       A       .       PASS    AA=g;DP=118     GT:GQ:DP        0|1:100:21      0|0:71:23       0|0:100:74
+6      88846818        .       G       A       .       PASS    AA=G;DP=125     GT:GQ:DP        0|1:100:21      0|0:71:23       0|0:100:80
+6      152278572       rs9397453       G       A       .       PASS    AA=G;DP=129     GT:GQ:DP        0|1:100:21      0|0:71:23       0|0:100:89
+13     105643453       .       T       A       .       PASS    AA=T;DP=110     GT:GQ:DP        0|1:100:21      0|0:71:24       0|0:100:67
+8      110045980       .       G       A       .       PASS    AA=G;DP=112     GT:GQ:DP        0|1:100:21      0|0:71:24       0|0:100:70
+7      81399953        rs1229489       G       C       .       PASS    AA=G;DP=126     GT:GQ:DP        0|1:100:21      0|0:73:31       0|0:100:76
+13     63888180        rs7997080       G       T       .       PASS    AA=T;DP=91      GT:GQ:DP        0|1:100:21      0|0:74:23       0|0:100:47
+5      162860485       rs28831449      C       T       .       PASS    AA=T;DP=93      GT:GQ:DP        0|1:100:21      0|0:74:23       0|0:100:48
+15     60121956        .       G       A       .       PASS    AA=G;DP=98      GT:GQ:DP        0|1:100:21      0|0:74:23       0|0:100:55
+10     36170821        rs2767054       T       C       .       PASS    AA=C;DP=107     GT:GQ:DP        0|1:100:21      0|0:74:23       0|0:100:61
+8      68559646        .       T       G       .       PASS    AA=T;DP=113     GT:GQ:DP        0|1:100:21      0|0:74:23       0|0:100:66
+4      105327801       rs9307291       C       A       .       PASS    AA=A;DP=120     GT:GQ:DP        0|1:100:21      0|0:74:23       0|0:100:77
+1      61729351        .       G       A       .       PASS    AA=G;DP=133     GT:GQ:DP        0|1:100:21      0|0:74:24       0|0:100:39
+2      176821962       .       G       A       .       PASS    AA=G;DP=103     GT:GQ:DP        0|1:100:21      0|0:74:24       0|0:100:57
+16     62043871        rs28787403      G       A       .       PASS    AA=G;DP=104     GT:GQ:DP        0|1:100:21      0|0:74:24       0|0:100:60
+14     86490508        rs28705072      A       G       .       PASS    AA=A;DP=105     GT:GQ:DP        0|1:100:21      0|0:74:24       0|0:100:63
+1      164945807       .       A       T       .       PASS    AA=a;DP=81      GT:GQ:DP        0|1:100:21      0|0:74:24       0|0:78:26
+3      69046011        .       C       T       .       PASS    AA=T;DP=123     GT:GQ:DP        0|1:100:21      0|0:77:24       0|0:100:35
+3      60973891        rs7429700       A       T       .       PASS    AA=A;DP=90      GT:GQ:DP        0|1:100:21      0|0:77:24       0|0:100:48
+5      150894637       .       T       C       .       PASS    AA=T;DP=102     GT:GQ:DP        0|1:100:21      0|0:77:24       0|0:100:58
+4      62122497        .       C       G       .       PASS    AA=C;DP=116     GT:GQ:DP        0|1:100:21      0|0:77:24       0|0:100:71
+8      62636383        .       C       T       .       PASS    AA=C;DP=114     GT:GQ:DP        0|1:100:21      0|0:77:24       0|0:87:29
+2      78078287        rs10207624      T       G       .       PASS    AA=T;DP=103     GT:GQ:DP        0|1:100:21      0|0:77:25       0|0:100:61
+15     73604617        rs8036758       G       A       .       PASS    AA=G;DP=91      GT:GQ:DP        0|1:100:21      0|0:77:25       0|0:97:43
+6      23987310        .       T       C       .       PASS    AA=T;DP=143     GT:GQ:DP        0|1:100:21      0|0:77:26       0|0:100:49
+3      118375186       rs1815003       T       C       .       PASS    AA=C;DP=114     GT:GQ:DP        0|1:100:21      0|0:77:26       0|0:100:68
+11     12958762        rs7929650       T       G       .       PASS    AA=G;DP=135     GT:GQ:DP        0|1:100:21      0|0:77:30       0|0:100:77
+6      101509118       .       T       G       .       PASS    AA=T;DP=93      GT:GQ:DP        0|1:100:21      0|0:80:25       0|0:100:48
+6      89349320        .       A       T       .       PASS    AA=A;DP=106     GT:GQ:DP        0|1:100:21      0|0:80:25       0|0:100:62
+1      70345293        rs57977150      G       A       .       PASS    AA=G;DP=114     GT:GQ:DP        0|1:100:21      0|0:80:25       0|0:100:67
+1      36230662        rs645123        T       C       .       PASS    AA=T;DP=118;HM2;HM3     GT:GQ:DP        0|1:100:21      0|0:80:25       0|0:100:70
+12     69021361        rs7309116       G       A       .       PASS    AA=N;DP=132     GT:GQ:DP        0|1:100:21      0|0:80:25       0|0:100:80
+7      110343487       .       A       G       .       PASS    AA=A;DP=132     GT:GQ:DP        0|1:100:21      0|0:80:25       0|0:85:35
+21     15382672        rs8132986       C       T       .       PASS    AA=C;DP=90      GT:GQ:DP        0|1:100:21      0|0:80:26       0|0:100:43
+1      162293794       .       G       A       .       PASS    AA=G;DP=104     GT:GQ:DP        0|1:100:21      0|0:80:26       0|0:100:60
+3      1758570 .       G       C       .       PASS    AA=g;DP=109     GT:GQ:DP        0|1:100:21      0|0:80:26       0|0:100:63
+8      63056768        .       C       T       .       PASS    AA=C;DP=94      GT:GQ:DP        0|1:100:21      0|0:83:26       0|0:100:35
+16     53790456        rs34650988      A       G       .       PASS    AA=A;DP=125     GT:GQ:DP        0|1:100:21      0|0:83:26       0|0:93:32
+7      144602440       .       T       C       .       PASS    AA=T;DP=111     GT:GQ:DP        0|1:100:21      0|0:83:27       0|0:100:62
+1      162369511       rs12045711      A       G       .       PASS    AA=A;DP=114;HM2 GT:GQ:DP        0|1:100:21      0|0:83:27       0|0:100:67
+20     17227804        .       T       A       .       PASS    AA=T;DP=112     GT:GQ:DP        0|1:100:21      0|0:83:27       0|0:100:68
+2      117424445       rs58852394      A       C       .       PASS    AA=C;DP=74      GT:GQ:DP        0|1:100:21      0|0:83:28       0|0:48:16
+9      104148045       rs9409041       C       T       .       PASS    AA=C;DP=141     GT:GQ:DP        0|1:100:21      0|0:86:27       0|0:100:43
+5      170332266       rs1080092       C       T       .       PASS    AA=C;DP=98      GT:GQ:DP        0|1:100:21      0|0:86:27       0|0:100:51
+18     66549822        rs1018233       C       G       .       PASS    AA=C;DP=108     GT:GQ:DP        0|1:100:21      0|0:86:27       0|0:100:58
+18     30453242        rs8083663       T       C       .       PASS    AA=T;DP=110     GT:GQ:DP        0|1:100:21      0|0:86:27       0|0:100:62
+11     26241605        rs12271476      G       A       .       PASS    AA=G;DP=115     GT:GQ:DP        0|1:100:21      0|0:86:27       0|0:100:67
+1      217656897       rs11118299      T       C       .       PASS    AA=T;DP=119;HM2 GT:GQ:DP        0|1:100:21      0|0:86:27       0|0:100:70
+5      166607511       rs1158065       C       A       .       PASS    AA=C;DP=127     GT:GQ:DP        0|1:100:21      0|0:86:27       0|0:100:81
+13     60343743        .       T       C       .       PASS    AA=C;DP=122     GT:GQ:DP        0|1:100:21      0|0:86:28       0|0:100:74
+20     12067964        rs8121305       C       T       .       PASS    AA=T;DP=105     GT:GQ:DP        0|1:100:21      0|0:86:29       0|0:100:55
+8      82149764        rs60410331      A       C       .       PASS    AA=A;DP=134     GT:GQ:DP        0|1:100:21      0|0:89:28       0|0:100:43
+12     89996478        rs11105973      A       T       .       PASS    AA=A;DP=121     GT:GQ:DP        0|1:100:21      0|0:89:28       0|0:100:70
+1      181885185       .       G       T       .       PASS    AA=G;DP=127     GT:GQ:DP        0|1:100:21      0|0:89:28       0|0:96:32
+19     36192219        rs10418485      C       T       .       PASS    AA=C;DP=134     GT:GQ:DP        0|1:100:21      0|0:89:29       0|0:100:84
+3      29001688        .       A       T       .       PASS    AA=A;DP=107     GT:GQ:DP        0|1:100:21      0|0:92:29       0|0:100:44
+6      81424032        rs11757148      G       A       .       PASS    AA=G;DP=131     GT:GQ:DP        0|1:100:21      0|0:92:29       0|0:100:81
+8      19518909        .       A       T       .       PASS    AA=T;DP=119     GT:GQ:DP        0|1:100:21      0|0:92:31       0|0:100:67
+6      29813384        rs2743917       C       T       .       PASS    AA=.;DP=101     GT:GQ:DP        0|1:100:21      0|0:92:35       0|0:100:46
+9      85114551        .       A       T       .       PASS    AA=A;DP=141     GT:GQ:DP        0|1:100:21      0|0:95:30       0|0:96:44
+13     83992267        rs11616451      G       A       .       PASS    AA=G;DP=127     GT:GQ:DP        0|1:100:21      0|0:95:31       0|0:100:73
+4      158283669       .       A       T       .       PASS    AA=A;DP=119     GT:GQ:DP        0|1:100:21      0|0:98:31       0|0:100:65
+16     19200003        .       C       G       .       PASS    AA=C;DP=133     GT:GQ:DP        0|1:100:21      0|0:98:31       0|0:100:81
+10     28329758        rs12763599      A       G       .       PASS    AA=A;DP=135     GT:GQ:DP        0|1:100:21      0|0:98:32       0|0:100:82
+12     23954736        .       C       T       .       PASS    AA=C;DP=141     GT:GQ:DP        0|1:100:21      0|0:98:32       0|0:100:84
+5      165743446       rs4868977       G       A       .       PASS    AA=A;DP=101     GT:GQ:DP        0|1:100:21      0|1:100:13      0|0:100:69
+6      10175040        rs1590308       G       C       .       PASS    AA=G;DP=89      GT:GQ:DP        0|1:100:21      0|1:100:15      0|0:100:49
+4      132592891       rs1280681       A       G       .       PASS    AA=A;DP=91      GT:GQ:DP        0|1:100:21      0|1:100:15      0|0:100:51
+8      78372371        .       A       G       .       PASS    AA=A;DP=109     GT:GQ:DP        0|1:100:21      0|1:100:15      0|0:100:74
+12     123422571       rs7961196       A       G       .       PASS    AA=G;DP=86      GT:GQ:DP        0|1:100:21      0|1:100:16      0|0:100:45
+2      185105706       .       C       A       .       PASS    AA=c;DP=94      GT:GQ:DP        0|1:100:21      0|1:100:17      0|0:100:54
+6      46842186        rs6927408       G       A       .       PASS    AA=A;DP=107     GT:GQ:DP        0|1:100:21      0|1:100:17      0|0:100:63
+18     74488273        rs11081633      G       A       .       PASS    AA=G;DP=101     GT:GQ:DP        0|1:100:21      0|1:100:17      0|0:100:65
+10     58941008        rs10826058      T       C       .       PASS    AA=T;DP=98      GT:GQ:DP        0|1:100:21      0|1:100:19      0|0:100:60
+2      129700011       rs1251210       G       A       .       PASS    AA=G;DP=115     GT:GQ:DP        0|1:100:21      0|1:100:19      0|0:100:75
+9      108979612       rs7047318       G       A       .       PASS    AA=G;DP=140     GT:GQ:DP        0|1:100:21      0|1:100:20      0|0:100:46
+11     49187636        rs660439        A       G       .       PASS    AA=G;DP=94      GT:GQ:DP        0|1:100:21      0|1:100:20      0|0:100:54
+13     30249440        rs4769879       C       T       .       PASS    AA=C;DP=94      GT:GQ:DP        0|1:100:21      0|1:100:20      0|0:100:55
+1      177706642       rs4372213       G       T       .       PASS    AA=T;DP=105     GT:GQ:DP        0|1:100:21      0|1:100:20      0|0:100:64
+7      31910892        rs7357122       T       C       .       PASS    AA=T;DP=108     GT:GQ:DP        0|1:100:21      0|1:100:20      0|0:66:24
+3      86951126        rs2118188       C       T       .       PASS    AA=N;DP=106     GT:GQ:DP        0|1:100:21      0|1:100:21      0|0:100:64
+15     96715640        rs12910609      C       T       .       PASS    AA=T;DP=135     GT:GQ:DP        0|1:100:21      0|1:100:22      0|0:100:43
+8      53612101        rs4873659       G       A       .       PASS    AA=G;DP=93      GT:GQ:DP        0|1:100:21      0|1:100:22      0|0:100:50
+10     109585223       rs4918324       C       T       .       PASS    AA=T;DP=116     GT:GQ:DP        0|1:100:21      0|1:100:22      0|0:100:73
+17     49246404        rs7216173       A       T       .       PASS    AA=A;DP=78      GT:GQ:DP        0|1:100:21      0|1:100:22      0|0:60:21
+13     91887814        rs7327184       G       A       .       PASS    AA=G;DP=92      GT:GQ:DP        0|1:100:21      0|1:100:24      0|0:100:46
+2      131562672       rs11904177      G       A       .       PASS    AA=A;DP=100     GT:GQ:DP        0|1:100:21      0|1:100:24      0|0:100:58
+5      72382979        rs7712838       A       G       .       PASS    AA=A;DP=115     GT:GQ:DP        0|1:100:21      0|1:100:24      0|0:90:31
+16     60744537        rs35489785      C       G       .       PASS    AA=C;DP=102     GT:GQ:DP        0|1:100:21      0|1:100:25      0|0:100:56
+6      155481637       rs2151960       G       A       .       PASS    AA=G;DP=109     GT:GQ:DP        0|1:100:21      0|1:100:27      0|0:100:60
+8      93727341        rs55774292      G       A       .       PASS    AA=G;DP=131     GT:GQ:DP        0|1:100:21      0|1:100:28      0|0:100:82
+5      151454494       rs488335        A       C       .       PASS    AA=A;DP=140     GT:GQ:DP        0|1:100:21      0|1:100:29      0|0:100:49
+2      105584476       rs11893182      G       A       .       PASS    AA=G;DP=121     GT:GQ:DP        0|1:100:21      0|1:100:30      0|0:100:71
+4      29411115        rs16882319      C       T       .       PASS    AA=T;DP=94      GT:GQ:DP        0|1:100:21      0|1:100:30      0|0:96:34
+3      81626826        rs12633695      G       C       .       PASS    AA=T;DP=103     GT:GQ:DP        0|1:100:21      0|1:100:31      0|0:100:49
+1      196845352       .       G       A       .       PASS    AA=G;DP=138     GT:GQ:DP        0|1:100:21      0|1:100:44      0|0:100:70
+5      53542995        rs16882451      T       C       .       PASS    AA=T;DP=115     GT:GQ:DP        0|1:100:21      0|1:15:18       0|0:100:37
+2      40900596        rs12613567      T       C       .       PASS    AA=C;DP=105     GT:GQ:DP        0|1:100:21      0|1:23:19       0|0:100:66
+14     54970613        rs7160543       T       C       .       PASS    AA=T;DP=107     GT:GQ:DP        0|1:100:21      0|1:32:14       0|0:100:70
+5      30599895        .       C       T       .       PASS    AA=c;DP=100     GT:GQ:DP        0|1:100:21      0|1:44:19       0|0:100:57
+6      106014302       rs9486105       T       C       .       PASS    AA=T;DP=103     GT:GQ:DP        0|1:100:21      0|1:50:24       0|0:100:59
+21     31737828        rs743414        G       T       .       PASS    AA=T;DP=98      GT:GQ:DP        0|1:100:21      0|1:51:10       0|0:100:69
+3      135236929       rs6765364       C       T       .       PASS    AA=T;DP=117     GT:GQ:DP        0|1:100:21      0|1:61:16       0|0:100:41
+5      121110706       rs2662296       C       G       .       PASS    AA=C;DP=102     GT:GQ:DP        0|1:100:21      0|1:66:20       0|0:100:62
+4      164688547       rs2221840       C       T       .       PASS    AA=C;DP=90      GT:GQ:DP        0|1:100:21      0|1:74:13       0|0:100:56
+1      180314555       rs12030839      T       C       .       PASS    AA=T;DP=113     GT:GQ:DP        0|1:100:21      0|1:74:19       0|0:100:72
+5      57647595        rs41385 T       A       .       PASS    AA=T;DP=90      GT:GQ:DP        0|1:100:21      0|1:75:13       0|0:100:57
+2      77149105        rs11903423      A       G       .       PASS    AA=A;DP=104     GT:GQ:DP        0|1:100:21      0|1:80:19       0|0:100:66
+3      107495717       rs4413340       C       A       .       PASS    AA=A;DP=84      GT:GQ:DP        0|1:100:21      0|1:83:18       0|0:90:47
+9      3827688 rs1598308       G       A       .       PASS    AA=A;DP=120     GT:GQ:DP        0|1:100:21      0|1:87:18       0|0:100:81
+2      55925084        .       G       A       .       PASS    AA=A;DP=95      GT:GQ:DP        0|1:100:21      0|1:87:23       0|0:100:52
+4      34425087        rs28628618      T       C       .       PASS    AA=T;DP=99      GT:GQ:DP        0|1:100:21      0|1:89:20       0|0:100:55
+6      22365310        rs6902447       C       A       .       PASS    AA=A;DP=98      GT:GQ:DP        0|1:100:21      0|1:92:22       0|0:100:53
+16     83731367        rs11149712      A       G       .       PASS    AA=A;DP=119     GT:GQ:DP        0|1:100:21      0|1:92:22       0|0:100:77
+6      100146725       .       C       T       .       PASS    AA=T;DP=92      GT:GQ:DP        0|1:100:21      0|1:96:18       0|0:100:53
+7      103168840       rs499238        G       A       .       PASS    AA=G;DP=115     GT:GQ:DP        0|1:100:21      0|1:97:24       0|0:100:68
+1      2253362 rs12752072      T       C       .       PASS    AA=T;DP=101     GT:GQ:DP        0|1:100:21      1|1:15:7        0|1:90:34
+4      31091436        rs60549274      A       C       .       PASS    AA=C;DP=110     GT:GQ:DP        0|1:100:21      1|1:16:17       0|1:100:70
+13     21053903        rs2761918       A       C       .       PASS    AA=C;DP=88      GT:GQ:DP        0|1:100:21      1|1:20:16       0|1:100:54
+4      179152044       rs1462513       T       G       .       PASS    AA=G;DP=105     GT:GQ:DP        0|1:100:21      1|1:21:24       0|1:100:63
+16     10706984        rs2719741       T       C       .       PASS    AA=C;DP=82      GT:GQ:DP        0|1:100:21      1|1:26:17       0|1:100:42
+13     71849331        rs1729494       G       A       .       PASS    AA=g;DP=113     GT:GQ:DP        0|1:100:21      1|1:27:21       0|1:100:71
+7      82944804        rs6467949       G       A       .       PASS    AA=A;DP=66      GT:GQ:DP        0|1:100:21      1|1:30:11       0|1:100:24
+10     117489319       rs2532705       G       A       .       PASS    AA=A;DP=68      GT:GQ:DP        0|1:100:21      1|1:30:11       0|1:100:26
+12     105332114       rs11112980      G       A       .       PASS    AA=A;DP=77      GT:GQ:DP        0|1:100:21      1|1:30:11       0|1:100:48
+3      20487031        rs6550534       A       C       .       PASS    AA=C;DP=92      GT:GQ:DP        0|1:100:21      1|1:30:20       0|1:100:51
+2      104342057       rs6543247       T       C       .       PASS    AA=C;DP=106     GT:GQ:DP        0|1:100:21      1|1:30:22       0|1:100:63
+16     21155257        rs8051620       G       C       .       PASS    AA=G;DP=107     GT:GQ:DP        0|1:100:21      1|1:36:13       0|1:100:74
+7      115929698       rs11983865      A       G       .       PASS    AA=G;DP=112     GT:GQ:DP        0|1:100:21      1|1:38:24       0|1:100:64
+2      185194579       rs359884        T       C       .       PASS    AA=t;DP=89      GT:GQ:DP        0|1:100:21      1|1:39:14       0|1:100:44
+13     39045156        rs6563727       G       A       .       PASS    AA=A;DP=96      GT:GQ:DP        0|1:100:21      1|1:39:15       0|1:100:61
+4      163226126       rs28669778      T       C       .       PASS    AA=T;DP=77      GT:GQ:DP        0|1:100:21      1|1:40:23       0|1:69:24
+9      104579990       rs2131271       T       G       .       PASS    AA=G;DP=98      GT:GQ:DP        0|1:100:21      1|1:42:15       0|1:100:63
+12     114730222       rs7312889       T       C       .       PASS    AA=T;DP=95      GT:GQ:DP        0|1:100:21      1|1:42:17       0|1:100:56
+1      145138571       rs894470        A       G       .       PASS    AA=G;DP=109;HM2;HM3     GT:GQ:DP        0|1:100:21      1|1:42:17       0|1:100:72
+4      20789481        rs16870541      T       C       .       PASS    AA=T;DP=93      GT:GQ:DP        0|1:100:21      1|1:45:18       0|1:100:54
+7      53740806        rs2330587       T       C       .       PASS    AA=C;DP=76      GT:GQ:DP        0|1:100:21      1|1:51:18       0|1:100:26
+13     47365566        .       G       A       .       PASS    AA=G;DP=93      GT:GQ:DP        0|1:100:21      1|1:51:18       0|1:100:56
+11     7663433 rs12274672      G       A       .       PASS    AA=G;DP=98      GT:GQ:DP        0|1:100:21      1|1:51:18       0|1:100:58
+13     84039365        rs7982481       A       G       .       PASS    AA=G;DP=105     GT:GQ:DP        0|1:100:21      1|1:51:25       0|1:100:54
+9      78883732        rs4745614       G       A       .       PASS    AA=A;DP=114     GT:GQ:DP        0|1:100:21      1|1:54:19       0|1:100:75
+4      36859729        rs1648398       T       A       .       PASS    AA=A;DP=102     GT:GQ:DP        0|1:100:21      1|1:54:20       0|1:100:58
+7      103140329       rs3819457       C       T       .       PASS    AA=T;DP=114     GT:GQ:DP        0|1:100:21      1|1:57:20       0|1:100:70
+1      38558550        rs1590880       T       C       .       PASS    AA=C;DP=98;HM2  GT:GQ:DP        0|1:100:21      1|1:59:27       0|1:100:54
+2      50508335        rs11125305      G       C       .       PASS    AA=G;DP=93      GT:GQ:DP        0|1:100:21      1|1:60:21       0|1:100:49
+18     56413582        rs8087270       G       A       .       PASS    AA=g;DP=112     GT:GQ:DP        0|1:100:21      1|1:60:21       0|1:100:67
+12     102762012       rs2576974       G       A       .       PASS    AA=A;DP=107     GT:GQ:DP        0|1:100:21      1|1:60:22       0|1:100:65
+12     82626203        rs11115986      A       G       .       PASS    AA=A;DP=99      GT:GQ:DP        0|1:100:21      1|1:60:27       0|1:100:51
+2      14531324        rs1918846       G       T       .       PASS    AA=G;DP=115     GT:GQ:DP        0|1:100:21      1|1:62:27       0|1:100:67
+1      73415665        rs4650198       C       T       .       PASS    AA=T;DP=91      GT:GQ:DP        0|1:100:21      1|1:63:22       0|1:100:47
+21     22247517        rs728229        G       A       .       PASS    AA=A;DP=105     GT:GQ:DP        0|1:100:21      1|1:63:22       0|1:100:55
+10     112610894       rs4918607       C       A       .       PASS    AA=C;DP=153     GT:GQ:DP        0|1:100:21      1|1:63:22       0|1:100:58
+13     103775474       .       G       T       .       PASS    AA=T;DP=102     GT:GQ:DP        0|1:100:21      1|1:63:22       0|1:100:59
+4      96919121        rs6842786       G       C       .       PASS    AA=N;DP=114     GT:GQ:DP        0|1:100:21      1|1:63:23       0|1:100:69
+5      103820789       rs2919959       G       A       .       PASS    AA=G;DP=116     GT:GQ:DP        0|1:100:21      1|1:63:24       0|1:100:70
+2      141065182       rs693474        C       A       .       PASS    AA=A;DP=83      GT:GQ:DP        0|1:100:21      1|1:66:23       0|1:100:39
+2      171170233       rs6433225       G       A       .       PASS    AA=A;DP=119     GT:GQ:DP        0|1:100:21      1|1:66:23       0|1:100:76
+15     34542022        rs6495837       A       T       .       PASS    AA=A;DP=97      GT:GQ:DP        0|1:100:21      1|1:69:26       0|1:100:50
+17     29483217        rs9913938       C       T       .       PASS    AA=C;DP=128     GT:GQ:DP        0|1:100:21      1|1:75:26       0|1:100:80
+13     106430166       rs4772835       G       C       .       PASS    AA=C;DP=112     GT:GQ:DP        0|1:100:21      1|1:81:29       0|1:100:57
+5      17058606        rs7726456       C       T       .       PASS    AA=T;DP=122     GT:GQ:DP        0|1:100:21      1|1:84:29       0|1:100:71
+5      120494758       rs7705085       A       C       .       PASS    AA=C;DP=110     GT:GQ:DP        0|1:100:21      1|1:84:30       0|1:100:57
+13     104203772       rs167747        G       A       .       PASS    AA=A;DP=123     GT:GQ:DP        0|1:100:21      1|1:87:30       0|1:100:73
+1      42722795        rs1335578       A       G       .       PASS    AA=A;DP=139;HM2;HM3     GT:GQ:DP        0|1:100:22      0|0:100:34      0|0:100:80
+4      158550799       rs13151798      T       C       .       PASS    AA=T;DP=141     GT:GQ:DP        0|1:100:22      0|0:100:36      0|0:100:83
+9      17379654        .       G       T       .       PASS    AA=G;DP=73      GT:GQ:DP        0|1:100:22      0|0:14:13       0|0:86:37
+3      75299641        .       G       T       .       PASS    AA=G;DP=95      GT:GQ:DP        0|1:100:22      0|0:17:18       0|0:100:58
+3      119613305       .       T       C       .       PASS    AA=T;DP=96      GT:GQ:DP        0|1:100:22      0|0:20:11       0|0:100:64
+4      167356019       .       T       G       .       PASS    AA=T;DP=90      GT:GQ:DP        0|1:100:22      0|0:21:16       0|0:100:52
+12     18598394        rs11833323      C       T       .       PASS    AA=T;DP=95      GT:GQ:DP        0|1:100:22      0|0:21:16       0|0:100:54
+12     33483163        .       G       A       .       PASS    AA=G;DP=71      GT:GQ:DP        0|1:100:22      0|0:26:7        0|0:93:31
+5      89417633        .       T       A       .       PASS    AA=T;DP=93      GT:GQ:DP        0|1:100:22      0|0:27:13       0|0:100:59
+4      149795877       rs62334364      T       G       .       PASS    AA=G;DP=136     GT:GQ:DP        0|1:100:22      0|0:27:18       0|0:100:52
+4      173914664       rs28727534      G       T       .       PASS    AA=G;DP=96      GT:GQ:DP        0|1:100:22      0|0:28:18       0|0:100:49
+19     42134291        rs826303        C       A       .       PASS    AA=C;DP=102     GT:GQ:DP        0|1:100:22      0|0:29:13       0|0:100:69
+5      37102897        .       C       T       .       PASS    AA=C;DP=125     GT:GQ:DP        0|1:100:22      0|0:29:17       0|0:100:86
+2      178892650       rs1434082       C       A       .       PASS    AA=A;DP=118     GT:GQ:DP        0|1:100:22      0|0:29:19       0|0:100:78
+8      145024997       .       C       T       .       PASS    AA=C;DP=79      GT:GQ:DP        0|1:100:22      0|0:29:8        0|0:100:49
+9      85559859        rs11140237      G       A       .       PASS    AA=G;DP=106     GT:GQ:DP        0|1:100:22      0|0:29:9        0|0:100:62
+6      102311160       .       G       A       .       PASS    AA=G;DP=90      GT:GQ:DP        0|1:100:22      0|0:33:15       0|0:100:51
+9      106798366       .       C       A       .       PASS    AA=C;DP=106     GT:GQ:DP        0|1:100:22      0|0:33:20       0|0:100:64
+13     25160180        rs17685787      A       G       .       PASS    AA=A;DP=110     GT:GQ:DP        0|1:100:22      0|0:38:11       0|0:100:75
+1      19524556        .       G       A       .       PASS    AA=G;DP=86      GT:GQ:DP        0|1:100:22      0|0:38:12       0|0:100:52
+10     29978320        rs1247450       T       A       .       PASS    AA=A;DP=89      GT:GQ:DP        0|1:100:22      0|0:38:12       0|0:100:55
+6      123594705       rs9490711       G       T       .       PASS    AA=G;DP=94      GT:GQ:DP        0|1:100:22      0|0:38:12       0|0:100:59
+4      45716414        .       G       A       .       PASS    AA=G;DP=97      GT:GQ:DP        0|1:100:22      0|0:38:12       0|0:100:64
+14     87422699        .       A       T       .       PASS    AA=A;DP=83      GT:GQ:DP        0|1:100:22      0|0:38:13       0|0:100:45
+9      116345997       .       C       T       .       PASS    AA=C;DP=103     GT:GQ:DP        0|1:100:22      0|0:38:13       0|0:100:63
+3      185845855       .       C       T       .       PASS    AA=C;DP=127     GT:GQ:DP        0|1:100:22      0|0:39:17       0|0:100:86
+2      190963091       rs11891039      C       T       .       PASS    AA=C;DP=100     GT:GQ:DP        0|1:100:22      0|0:39:18       0|0:100:63
+4      110579213       .       G       T       .       PASS    AA=G;DP=100     GT:GQ:DP        0|1:100:22      0|0:39:25       0|0:100:53
+18     75091399        rs4449018       G       A       .       PASS    AA=A;DP=115     GT:GQ:DP        0|1:100:22      0|0:39:25       0|0:100:71
+9      32073582        .       C       T       .       PASS    AA=C;DP=76      GT:GQ:DP        0|1:100:22      0|0:41:12       0|0:100:38
+11     98451516        rs1940515       G       A       .       PASS    AA=A;DP=88      GT:GQ:DP        0|1:100:22      0|0:41:12       0|0:100:50
+15     23624231        rs1596629       A       G       .       PASS    AA=G;DP=105     GT:GQ:DP        0|1:100:22      0|0:41:12       0|0:93:32
+2      194515352       rs10185757      A       G       .       PASS    AA=A;DP=102     GT:GQ:DP        0|1:100:22      0|0:41:13       0|0:100:69
+10     28078387        .       T       C       .       PASS    AA=T;DP=88      GT:GQ:DP        0|1:100:22      0|0:41:14       0|0:100:52
+13     21815087        rs6490728       T       A       .       PASS    AA=A;DP=95      GT:GQ:DP        0|1:100:22      0|0:41:14       0|0:100:60
+10     64531803        rs7072261       G       A       .       PASS    AA=G;DP=92      GT:GQ:DP        0|1:100:22      0|0:41:15       0|0:100:55
+11     115575019       rs11604241      G       A       .       PASS    AA=G;DP=131     GT:GQ:DP        0|1:100:22      0|0:41:18       0|0:100:93
+11     40587181        .       C       A       .       PASS    AA=C;DP=131     GT:GQ:DP        0|1:100:22      0|0:41:23       0|0:100:41
+3      160029678       rs12490494      T       G       .       PASS    AA=T;DP=109     GT:GQ:DP        0|1:100:22      0|0:41:23       0|0:100:64
+14     37992472        .       G       T       .       PASS    AA=G;DP=97      GT:GQ:DP        0|1:100:22      0|0:42:21       0|0:100:55
+5      26001371        .       T       A       .       PASS    AA=T;DP=84      GT:GQ:DP        0|1:100:22      0|0:44:13       0|0:100:51
+3      111673080       rs4682585       T       C       .       PASS    AA=C;DP=98      GT:GQ:DP        0|1:100:22      0|0:44:13       0|0:100:59
+19     20833748        rs13346227      G       A       .       PASS    AA=g;DP=74      GT:GQ:DP        0|1:100:22      0|0:44:13       0|0:90:30
+X      1397378 .       T       C       .       PASS    AA=.;DP=72      GT:GQ:DP        0|1:100:22      0|0:44:13       0|0:99:33
+12     89468374        .       G       A       .       PASS    AA=G;DP=81      GT:GQ:DP        0|1:100:22      0|0:44:14       0|0:100:47
+6      32380305        rs9268165       A       G       .       PASS    AA=G;DP=84      GT:GQ:DP        0|1:100:22      0|0:44:14       0|0:100:49
+19     34814743        rs4805453       T       C       .       PASS    AA=T;DP=122     GT:GQ:DP        0|1:100:22      0|0:47:14       0|0:100:37
+8      95414693        .       A       C       .       PASS    AA=A;DP=81      GT:GQ:DP        0|1:100:22      0|0:47:14       0|0:100:44
+4      175463205       .       C       T       .       PASS    AA=C;DP=85      GT:GQ:DP        0|1:100:22      0|0:47:14       0|0:100:50
+11     38182171        rs10768362      G       A       .       PASS    AA=G;DP=93      GT:GQ:DP        0|1:100:22      0|0:47:14       0|0:100:57
+2      237124598       rs7591221       G       A       .       PASS    AA=G;DP=102     GT:GQ:DP        0|1:100:22      0|0:47:14       0|0:100:67
+1      104319073       .       T       C       .       PASS    AA=T;DP=94      GT:GQ:DP        0|1:100:22      0|0:47:15       0|0:100:48
+2      233201682       .       G       A       .       PASS    AA=G;DP=116     GT:GQ:DP        0|1:100:22      0|0:47:15       0|0:100:75
+17     11137222        .       A       G       .       PASS    AA=A;DP=110     GT:GQ:DP        0|1:100:22      0|0:47:15       0|0:96:32
+6      85652158        rs12110418      C       T       .       PASS    AA=c;DP=87      GT:GQ:DP        0|1:100:22      0|0:48:20       0|0:100:44
+11     104486778       rs519658        C       A       .       PASS    AA=-;DP=134     GT:GQ:DP        0|1:100:22      0|0:49:26       0|0:100:40
+21     28278054        rs2831301       G       A       .       PASS    AA=G;DP=99      GT:GQ:DP        0|1:100:22      0|0:50:15       0|0:100:62
+1      1855158 rs2803316       A       G       .       PASS    AA=A;DP=111;HM2;HM3     GT:GQ:DP        0|1:100:22      0|0:50:15       0|0:100:77
+1      64457753        .       T       G       .       PASS    AA=T;DP=103     GT:GQ:DP        0|1:100:22      0|0:50:15       0|0:66:22
+16     59960305        .       G       T       .       PASS    AA=T;DP=116     GT:GQ:DP        0|1:100:22      0|0:50:15       0|0:91:39
+2      232019876       rs4973406       G       A       .       PASS    AA=G;DP=87      GT:GQ:DP        0|1:100:22      0|0:50:16       0|0:100:49
+2      159308025       rs1996274       C       T       .       PASS    AA=C;DP=88      GT:GQ:DP        0|1:100:22      0|0:50:16       0|0:100:50
+3      160218270       rs12486978      A       C       .       PASS    AA=C;DP=105     GT:GQ:DP        0|1:100:22      0|0:50:16       0|0:100:68
+7      12826714        rs28448740      C       T       .       PASS    AA=-;DP=108     GT:GQ:DP        0|1:100:22      0|0:50:16       0|0:100:72
+18     73813301        .       C       A       .       PASS    AA=C;DP=98      GT:GQ:DP        0|1:100:22      0|0:50:17       0|0:100:56
+19     7643187 rs35091409      C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        0|1:100:22      0|0:50:17       0|0:100:73
+21     31674756        rs12483487      T       A       .       PASS    AA=T;DP=96      GT:GQ:DP        0|1:100:22      0|0:50:20       0|0:100:54
+8      76449085        rs59134671      A       C       .       PASS    AA=A;DP=97      GT:GQ:DP        0|1:100:22      0|0:51:20       0|0:100:55
+2      164459007       rs58376604      T       C       .       PASS    AA=T;DP=123     GT:GQ:DP        0|1:100:22      0|0:52:22       0|0:100:34
+8      14723625        rs4292689       G       A       .       PASS    AA=G;DP=80      GT:GQ:DP        0|1:100:22      0|0:53:16       0|0:100:41
+5      154004486       rs6877721       C       G       .       PASS    AA=C;DP=95      GT:GQ:DP        0|1:100:22      0|0:53:16       0|0:100:57
+2      177318664       .       G       A       .       PASS    AA=G;DP=104     GT:GQ:DP        0|1:100:22      0|0:53:16       0|0:100:67
+4      160380507       .       C       T       .       PASS    AA=C;DP=111     GT:GQ:DP        0|1:100:22      0|0:53:16       0|0:100:70
+4      168347239       .       T       C       .       PASS    AA=T;DP=86      GT:GQ:DP        0|1:100:22      0|0:53:17       0|0:100:47
+21     44221763        rs2838457       C       G       .       PASS    AA=C;DP=108     GT:GQ:DP        0|1:100:22      0|0:53:18       0|0:100:61
+9      117344045       .       C       G       .       PASS    AA=C;DP=103     GT:GQ:DP        0|1:100:22      0|0:53:18       0|0:100:66
+13     100010808       .       G       A       .       PASS    AA=g;DP=129     GT:GQ:DP        0|1:100:22      0|0:54:22       0|0:100:84
+2      105507340       rs55672745      A       G       .       PASS    AA=A;DP=79      GT:GQ:DP        0|1:100:22      0|0:56:17       0|0:100:40
+16     56420176        .       G       A       .       PASS    AA=G;DP=92      GT:GQ:DP        0|1:100:22      0|0:56:17       0|0:100:53
+8      3956067 rs57123478      C       A       .       PASS    AA=c;DP=104     GT:GQ:DP        0|1:100:22      0|0:56:17       0|0:100:67
+4      180598355       rs2605047       G       T       .       PASS    AA=t;DP=107     GT:GQ:DP        0|1:100:22      0|0:56:17       0|0:100:68
+6      62413770        rs2179769       A       G       .       PASS    AA=A;DP=114     GT:GQ:DP        0|1:100:22      0|0:56:17       0|0:100:77
+14     90429804        .       T       A       .       PASS    AA=T;DP=77      GT:GQ:DP        0|1:100:22      0|0:56:18       0|0:100:37
+15     82926110        .       C       T       .       PASS    AA=N;DP=98      GT:GQ:DP        0|1:100:22      0|0:56:18       0|0:100:44
+4      116456892       rs57517076      C       T       .       PASS    AA=C;DP=96      GT:GQ:DP        0|1:100:22      0|0:56:18       0|0:100:51
+13     104162609       .       C       T       .       PASS    AA=C;DP=94      GT:GQ:DP        0|1:100:22      0|0:56:18       0|0:100:53
+6      124849526       rs717515        C       G       .       PASS    AA=C;DP=104     GT:GQ:DP        0|1:100:22      0|0:56:18       0|0:100:61
+3      24180836        .       T       C       .       PASS    AA=T;DP=111     GT:GQ:DP        0|1:100:22      0|0:56:18       0|0:100:67
+3      77202596        .       G       A       .       PASS    AA=g;DP=113     GT:GQ:DP        0|1:100:22      0|0:56:18       0|0:100:77
+18     30539926        rs61132350      C       T       .       PASS    AA=c;DP=75      GT:GQ:DP        0|1:100:22      0|0:56:18       0|0:75:25
+8      18433827        .       G       A       .       PASS    AA=G;DP=137     GT:GQ:DP        0|1:100:22      0|0:58:29       0|0:100:87
+4      113161891       rs7654475       G       A       .       PASS    AA=G;DP=91      GT:GQ:DP        0|1:100:22      0|0:59:18       0|0:100:50
+1      56640111        rs3005916       C       T       .       PASS    AA=C;DP=95;HM2;HM3      GT:GQ:DP        0|1:100:22      0|0:59:18       0|0:100:55
+4      175119012       rs4695751       T       C       .       PASS    AA=T;DP=97      GT:GQ:DP        0|1:100:22      0|0:59:18       0|0:100:55
+7      140031361       rs11972791      C       A       .       PASS    AA=-;DP=99      GT:GQ:DP        0|1:100:22      0|0:59:18       0|0:100:57
+2      21049007        .       A       T       .       PASS    AA=A;DP=100     GT:GQ:DP        0|1:100:22      0|0:59:18       0|0:100:58
+21     29051097        rs59580249      A       C       .       PASS    AA=A;DP=99      GT:GQ:DP        0|1:100:22      0|0:59:18       0|0:100:59
+13     110431097       rs1962148       A       G       .       PASS    AA=A;DP=103     GT:GQ:DP        0|1:100:22      0|0:59:18       0|0:100:61
+4      67132065        .       T       G       .       PASS    AA=T;DP=101     GT:GQ:DP        0|1:100:22      0|0:59:18       0|0:100:63
+8      26949189        rs10111273      T       G       .       PASS    AA=T;DP=104     GT:GQ:DP        0|1:100:22      0|0:59:18       0|0:100:65
+4      122895983       rs57168192      T       C       .       PASS    AA=T;DP=110     GT:GQ:DP        0|1:100:22      0|0:59:18       0|0:100:70
+4      179591066       rs11945693      T       C       .       PASS    AA=T;DP=106     GT:GQ:DP        0|1:100:22      0|0:59:18       0|0:100:70
+1      72835567        rs12074405      T       G       .       PASS    AA=T;DP=112;HM2 GT:GQ:DP        0|1:100:22      0|0:59:18       0|0:100:72
+11     83616706        .       T       C       .       PASS    AA=-;DP=112     GT:GQ:DP        0|1:100:22      0|0:59:18       0|0:84:29
+8      14318402        rs11990060      A       G       .       PASS    AA=A;DP=105     GT:GQ:DP        0|1:100:22      0|0:59:19       0|0:100:65
+17     44135496        rs4793976       T       C       .       PASS    AA=T;DP=118     GT:GQ:DP        0|1:100:22      0|0:59:19       0|0:100:79
+12     127058254       .       G       A       .       PASS    AA=G;DP=123     GT:GQ:DP        0|1:100:22      0|0:59:19       0|0:100:84
+2      129284880       rs56812091      C       T       .       PASS    AA=C;DP=128     GT:GQ:DP        0|1:100:22      0|0:59:19       0|0:100:84
+6      112532999       rs6919384       G       A       .       PASS    AA=A;DP=116     GT:GQ:DP        0|1:100:22      0|0:59:20       0|0:100:71
+11     57756890        .       A       C       .       PASS    AA=A;DP=105     GT:GQ:DP        0|1:100:22      0|0:62:19       0|0:100:60
+12     19995024        .       C       A       .       PASS    AA=C;DP=111     GT:GQ:DP        0|1:100:22      0|0:62:19       0|0:100:71
+1      215418029       rs11117784      T       C       .       PASS    AA=T;DP=115;HM2;HM3     GT:GQ:DP        0|1:100:22      0|0:62:19       0|0:100:75
+2      17339354        rs12710640      A       G       .       PASS    AA=A;DP=72      GT:GQ:DP        0|1:100:22      0|0:62:19       0|0:93:32
+10     108525461       rs17121480      T       C       .       PASS    AA=T;DP=110     GT:GQ:DP        0|1:100:22      0|0:62:20       0|0:100:69
+15     37434422        .       T       G       .       PASS    AA=T;DP=123     GT:GQ:DP        0|1:100:22      0|0:62:20       0|0:100:82
+3      125170915       .       A       G       .       PASS    AA=A;DP=104     GT:GQ:DP        0|1:100:22      0|0:62:22       0|0:100:59
+12     49568785        .       C       A       .       PASS    AA=C;DP=116     GT:GQ:DP        0|1:100:22      0|0:63:28       0|0:100:64
+11     84047108        .       C       G       .       PASS    AA=C;DP=133     GT:GQ:DP        0|1:100:22      0|0:63:31       0|0:100:81
+15     74896788        .       A       G       .       PASS    AA=A;DP=128     GT:GQ:DP        0|1:100:22      0|0:64:20       0|0:100:40
+1      62397266        .       A       C       .       PASS    AA=A;DP=89      GT:GQ:DP        0|1:100:22      0|0:65:20       0|0:100:47
+3      35174947        rs4308219       T       C       .       PASS    AA=T;DP=97      GT:GQ:DP        0|1:100:22      0|0:65:20       0|0:100:53
+15     77775197        rs16971253      T       C       .       PASS    AA=T;DP=97      GT:GQ:DP        0|1:100:22      0|0:65:20       0|0:100:55
+14     89910907        .       T       C       .       PASS    AA=C;DP=99      GT:GQ:DP        0|1:100:22      0|0:65:20       0|0:100:56
+1      235732916       rs2618700       C       G       .       PASS    AA=C;DP=102;HM2 GT:GQ:DP        0|1:100:22      0|0:65:20       0|0:100:60
+14     95498954        rs10143967      C       A       .       PASS    AA=A;DP=108     GT:GQ:DP        0|1:100:22      0|0:65:20       0|0:100:68
+20     7623598 .       T       G       .       PASS    AA=T;DP=114     GT:GQ:DP        0|1:100:22      0|0:65:20       0|0:100:69
+11     97675343        .       A       G       .       PASS    AA=A;DP=106     GT:GQ:DP        0|1:100:22      0|0:65:20       0|0:100:70
+12     125521386       rs10773281      G       A       .       PASS    AA=G;DP=114     GT:GQ:DP        0|1:100:22      0|0:65:20       0|0:100:72
+12     114483270       rs12302260      C       T       .       PASS    AA=c;DP=125     GT:GQ:DP        0|1:100:22      0|0:65:20       0|0:100:76
+4      176875302       rs2644000       C       T       .       PASS    AA=C;DP=124     GT:GQ:DP        0|1:100:22      0|0:65:20       0|0:100:80
+18     4452199 .       A       C       .       PASS    AA=A;DP=89      GT:GQ:DP        0|1:100:22      0|0:65:20       0|0:93:34
+1      222659503       rs12731035      T       A       .       PASS    AA=T;DP=83      GT:GQ:DP        0|1:100:22      0|0:65:21       0|0:100:39
+7      67341105        .       C       A       .       PASS    AA=C;DP=101     GT:GQ:DP        0|1:100:22      0|0:65:21       0|0:100:58
+11     98033021        .       A       T       .       PASS    AA=A;DP=111     GT:GQ:DP        0|1:100:22      0|0:65:21       0|0:100:70
+2      75406038        .       C       T       .       PASS    AA=C;DP=121     GT:GQ:DP        0|1:100:22      0|0:65:21       0|0:100:79
+1      156777976       .       C       T       .       PASS    AA=C;DP=100     GT:GQ:DP        0|1:100:22      0|0:65:22       0|0:100:55
+2      102089480       .       C       G       .       PASS    AA=C;DP=102     GT:GQ:DP        0|1:100:22      0|0:65:22       0|0:100:57
+11     32314260        .       T       C       .       PASS    AA=T;DP=137     GT:GQ:DP        0|1:100:22      0|0:66:28       0|0:100:89
+4      55854314        rs28409580      T       G       .       PASS    AA=G;DP=127     GT:GQ:DP        0|1:100:22      0|0:68:21       0|0:100:40
+21     29395554        .       T       A       .       PASS    AA=T;DP=147     GT:GQ:DP        0|1:100:22      0|0:68:21       0|0:100:47
+7      130599796       rs62472001      T       C       .       PASS    AA=T;DP=96      GT:GQ:DP        0|1:100:22      0|0:68:21       0|0:100:50
+1      100454832       rs12124225      G       A       .       PASS    AA=G;DP=102     GT:GQ:DP        0|1:100:22      0|0:68:21       0|0:100:60
+13     69514173        .       T       C       .       PASS    AA=T;DP=104     GT:GQ:DP        0|1:100:22      0|0:68:21       0|0:100:61
+7      145134877       rs35095326      C       T       .       PASS    AA=c;DP=111     GT:GQ:DP        0|1:100:22      0|0:68:21       0|0:100:67
+3      19868719        .       C       A       .       PASS    AA=C;DP=114     GT:GQ:DP        0|1:100:22      0|0:68:21       0|0:100:69
+5      118699416       rs7725878       G       A       .       PASS    AA=G;DP=113     GT:GQ:DP        0|1:100:22      0|0:68:21       0|0:100:69
+6      72285279        rs34239957      G       A       .       PASS    AA=A;DP=115     GT:GQ:DP        0|1:100:22      0|0:68:21       0|0:100:72
+7      82757305        rs2214354       A       C       .       PASS    AA=A;DP=81      GT:GQ:DP        0|1:100:22      0|0:68:21       0|0:75:26
+3      151961760       rs1915365       C       G       .       PASS    AA=G;DP=100     GT:GQ:DP        0|1:100:22      0|0:68:22       0|0:100:54
+3      192247531       rs62286688      G       A       .       PASS    AA=G;DP=101     GT:GQ:DP        0|1:100:22      0|0:68:22       0|0:100:57
+4      126223248       rs6834520       C       G       .       PASS    AA=G;DP=101     GT:GQ:DP        0|1:100:22      0|0:68:22       0|0:100:58
+2      103254956       rs10166815      C       T       .       PASS    AA=T;DP=115     GT:GQ:DP        0|1:100:22      0|0:68:23       0|0:100:70
+12     13422978        rs4285966       T       C       .       PASS    AA=T;DP=124     GT:GQ:DP        0|1:100:22      0|0:68:23       0|0:100:81
+2      235751917       .       G       A       .       PASS    AA=g;DP=139     GT:GQ:DP        0|1:100:22      0|0:68:24       0|0:100:90
+13     94444957        rs9556446       G       C       .       PASS    AA=C;DP=121     GT:GQ:DP        0|1:100:22      0|0:69:28       0|0:100:72
+2      121465290       .       T       A       .       PASS    AA=T;DP=145     GT:GQ:DP        0|1:100:22      0|0:69:30       0|0:100:40
+7      7116832 rs1432193       C       A       .       PASS    AA=C;DP=142     GT:GQ:DP        0|1:100:22      0|0:70:32       0|0:100:92
+4      18289424        rs9991601       G       T       .       PASS    AA=G;DP=124     GT:GQ:DP        0|1:100:22      0|0:71:22       0|0:100:40
+16     30063640        .       G       A       .       PASS    AA=G;DP=108     GT:GQ:DP        0|1:100:22      0|0:71:22       0|0:100:65
+10     9336066 rs60762967      A       G       .       PASS    AA=A;DP=110     GT:GQ:DP        0|1:100:22      0|0:71:22       0|0:100:66
+4      19312785        rs16868724      G       C       .       PASS    AA=G;DP=125     GT:GQ:DP        0|1:100:22      0|0:71:22       0|0:100:69
+10     27244173        .       A       G       .       PASS    AA=a;DP=116     GT:GQ:DP        0|1:100:22      0|0:71:22       0|0:100:70
+2      51653366        rs28957703      T       C       .       PASS    AA=T;DP=94      GT:GQ:DP        0|1:100:22      0|0:71:23       0|0:100:49
+8      102144973       .       A       T       .       PASS    AA=A;DP=112     GT:GQ:DP        0|1:100:22      0|0:71:23       0|0:100:68
+14     27978414        .       T       G       .       PASS    AA=T;DP=114     GT:GQ:DP        0|1:100:22      0|0:71:23       0|0:100:71
+16     79248778        rs8061263       C       G       .       PASS    AA=C;DP=136     GT:GQ:DP        0|1:100:22      0|0:71:24       0|0:100:40
+13     99357790        rs9585273       G       A       .       PASS    AA=G;DP=100     GT:GQ:DP        0|1:100:22      0|0:71:24       0|0:100:54
+8      50768663        .       T       C       .       PASS    AA=T;DP=106     GT:GQ:DP        0|1:100:22      0|0:71:24       0|0:100:61
+12     30067073        rs1072769       C       T       .       PASS    AA=C;DP=140     GT:GQ:DP        0|1:100:22      0|0:74:23       0|0:100:52
+17     62076966        rs56059310      G       A       .       PASS    AA=G;DP=104     GT:GQ:DP        0|1:100:22      0|0:74:23       0|0:100:58
+4      134037478       rs28768481      G       T       .       PASS    AA=G;DP=103     GT:GQ:DP        0|1:100:22      0|0:74:23       0|0:100:59
+13     58940377        rs1414978       T       A       .       PASS    AA=T;DP=115     GT:GQ:DP        0|1:100:22      0|0:74:23       0|0:100:69
+5      122826223       .       T       C       .       PASS    AA=T;DP=116     GT:GQ:DP        0|1:100:22      0|0:74:23       0|0:100:71
+11     37415746        .       A       T       .       PASS    AA=A;DP=121     GT:GQ:DP        0|1:100:22      0|0:74:23       0|0:100:73
+3      121275784       .       T       C       .       PASS    AA=C;DP=119     GT:GQ:DP        0|1:100:22      0|0:74:23       0|0:100:74
+7      147398764       .       A       G       .       PASS    AA=A;DP=78      GT:GQ:DP        0|1:100:22      0|0:74:23       0|0:87:29
+14     43665625        .       A       C       .       PASS    AA=A;DP=123     GT:GQ:DP        0|1:100:22      0|0:74:24       0|0:100:34
+17     13436474        rs3785690       C       T       .       PASS    AA=C;DP=99      GT:GQ:DP        0|1:100:22      0|0:74:24       0|0:100:54
+6      15923443        rs2206341       G       A       .       PASS    AA=G;DP=112     GT:GQ:DP        0|1:100:22      0|0:74:24       0|0:100:62
+3      87895460        .       C       T       .       PASS    AA=C;DP=102     GT:GQ:DP        0|1:100:22      0|0:75:24       0|0:100:44
+5      23669675        rs12697630      A       T       .       PASS    AA=A;DP=112     GT:GQ:DP        0|1:100:22      0|0:77:24       0|0:100:66
+6      19886378        rs2206036       T       C       .       PASS    AA=T;DP=114     GT:GQ:DP        0|1:100:22      0|0:77:24       0|0:100:72
+12     72422795        rs10437936      C       G       .       PASS    AA=G;DP=117     GT:GQ:DP        0|1:100:22      0|0:77:25       0|0:100:70
+6      35762893        .       C       T       .       PASS    AA=C;DP=108     GT:GQ:DP        0|1:100:22      0|0:77:26       0|0:100:59
+1      218600359       rs12064931      C       T       .       PASS    AA=C;DP=116;HM2;HM3     GT:GQ:DP        0|1:100:22      0|0:77:26       0|0:100:67
+7      23256375        .       T       C       .       PASS    AA=T;DP=142     GT:GQ:DP        0|1:100:22      0|0:77:26       0|0:100:93
+6      151422950       .       C       T       .       PASS    AA=C;DP=143     GT:GQ:DP        0|1:100:22      0|0:77:26       0|0:100:95
+1      26383236        .       A       T       .       PASS    AA=a;DP=91      GT:GQ:DP        0|1:100:22      0|0:7:6 0|0:100:63
+6      122023837       .       C       T       .       PASS    AA=C;DP=102     GT:GQ:DP        0|1:100:22      0|0:80:25       0|0:100:55
+9      14774389        rs41265306      G       A       .       PASS    AA=G;DP=119     GT:GQ:DP        0|1:100:22      0|0:80:25       0|0:100:72
+8      119053636       .       A       T       .       PASS    AA=A;DP=129     GT:GQ:DP        0|1:100:22      0|0:80:25       0|0:100:79
+2      122918697       rs1598022       T       C       .       PASS    AA=T;DP=125     GT:GQ:DP        0|1:100:22      0|0:80:25       0|0:93:31
+1      244360572       rs36017497      G       T       .       PASS    AA=G;DP=107     GT:GQ:DP        0|1:100:22      0|0:80:26       0|0:100:59
+3      176427662       rs62285897      C       T       .       PASS    AA=c;DP=132     GT:GQ:DP        0|1:100:22      0|0:83:26       0|0:100:43
+7      82688868        .       G       A       .       PASS    AA=g;DP=102     GT:GQ:DP        0|1:100:22      0|0:83:26       0|0:100:53
+6      70967130        rs583618        C       T       .       PASS    AA=T;DP=102     GT:GQ:DP        0|1:100:22      0|0:83:26       0|0:100:55
+15     31833436        rs5007829       A       C       .       PASS    AA=A;DP=112     GT:GQ:DP        0|1:100:22      0|0:83:26       0|0:100:67
+3      80231585        .       T       C       .       PASS    AA=T;DP=117     GT:GQ:DP        0|1:100:22      0|0:83:28       0|0:100:66
+4      145512489       rs970022        T       C       .       PASS    AA=T;DP=133     GT:GQ:DP        0|1:100:22      0|0:83:29       0|0:100:79
+2      79063477        .       A       G       .       PASS    AA=A;DP=126     GT:GQ:DP        0|1:100:22      0|0:83:32       0|0:100:71
+5      117473162       rs11955772      T       C       .       PASS    AA=T;DP=125     GT:GQ:DP        0|1:100:22      0|0:84:29       0|0:100:76
+10     30537320        rs561273        G       A       .       PASS    AA=A;DP=109     GT:GQ:DP        0|1:100:22      0|0:86:27       0|0:100:54
+7      12034226        .       T       C       .       PASS    AA=T;DP=113     GT:GQ:DP        0|1:100:22      0|0:86:27       0|0:100:64
+3      112662011       rs9826798       G       A       .       PASS    AA=N;DP=111     GT:GQ:DP        0|1:100:22      0|0:86:27       0|0:100:65
+13     86333548        .       G       T       .       PASS    AA=G;DP=119     GT:GQ:DP        0|1:100:22      0|0:86:27       0|0:100:72
+5      19999724        rs13153690      T       A       .       PASS    AA=T;DP=123     GT:GQ:DP        0|1:100:22      0|0:86:27       0|0:100:75
+14     75820889        .       A       G       .       PASS    AA=A;DP=93      GT:GQ:DP        0|1:100:22      0|0:86:27       0|0:96:32
+12     60082738        rs11173977      G       C       .       PASS    AA=C;DP=100     GT:GQ:DP        0|1:100:22      0|0:86:28       0|0:100:52
+14     40748126        .       G       A       .       PASS    AA=g;DP=121     GT:GQ:DP        0|1:100:22      0|0:86:28       0|0:100:74
+11     13762575        .       T       C       .       PASS    AA=T;DP=140     GT:GQ:DP        0|1:100:22      0|0:86:28       0|0:100:93
+7      63317534        rs4320434       C       A       .       PASS    AA=N;DP=137     GT:GQ:DP        0|1:100:22      0|0:89:28       0|0:100:45
+4      129289649       .       G       A       .       PASS    AA=G;DP=123     GT:GQ:DP        0|1:100:22      0|0:89:28       0|0:100:72
+5      110007637       .       T       C       .       PASS    AA=T;DP=107     GT:GQ:DP        0|1:100:22      0|0:89:29       0|0:100:56
+13     78293268        .       G       A       .       PASS    AA=G;DP=111     GT:GQ:DP        0|1:100:22      0|0:89:29       0|0:100:61
+17     38410631        rs1108287       T       G       .       PASS    AA=T;DP=138     GT:GQ:DP        0|1:100:22      0|0:91:35       0|0:100:35
+14     98776227        rs10136429      G       A       .       PASS    AA=G;DP=111     GT:GQ:DP        0|1:100:22      0|0:92:29       0|0:100:60
+3      22178298        rs12637217      T       C       .       PASS    AA=T;DP=118     GT:GQ:DP        0|1:100:22      0|0:92:29       0|0:100:70
+13     94039167        .       T       C       .       PASS    AA=T;DP=138     GT:GQ:DP        0|1:100:22      0|0:92:31       0|0:100:37
+1      209191055       rs17188748      C       G       .       PASS    AA=G;DP=139;HM2 GT:GQ:DP        0|1:100:22      0|0:92:31       0|0:100:49
+4      73093645        rs28656416      G       A       .       PASS    AA=.;DP=117     GT:GQ:DP        0|1:100:22      0|0:92:32       0|0:100:64
+3      82017850        rs6791857       T       C       .       PASS    AA=T;DP=99      GT:GQ:DP        0|1:100:22      0|0:95:30       0|0:100:47
+8      58438475        .       A       G       .       PASS    AA=a;DP=107     GT:GQ:DP        0|1:100:22      0|0:95:30       0|0:100:56
+10     45442800        rs10793621      G       A       .       PASS    AA=G;DP=131     GT:GQ:DP        0|1:100:22      0|0:95:30       0|0:100:81
+18     28203517        rs16963270      G       A       .       PASS    AA=A;DP=121     GT:GQ:DP        0|1:100:22      0|0:95:31       0|0:100:68
+18     38851653        rs58766409      A       G       .       PASS    AA=A;DP=144     GT:GQ:DP        0|1:100:22      0|0:95:32       0|0:100:43
+13     91344021        rs58927889      C       T       .       PASS    AA=C;DP=119     GT:GQ:DP        0|1:100:22      0|0:98:31       0|0:100:66
+6      56252930        rs9382603       A       T       .       PASS    AA=A;DP=124     GT:GQ:DP        0|1:100:22      0|0:98:31       0|0:100:71
+10     114867090       rs28542785      G       A       .       PASS    AA=G;DP=129     GT:GQ:DP        0|1:100:22      0|0:98:31       0|0:100:78
+12     124391755       rs10846877      T       G       .       PASS    AA=T;DP=139     GT:GQ:DP        0|1:100:22      0|0:98:31       0|0:100:87
+4      19721158        rs35974961      C       T       .       PASS    AA=C;DP=89      GT:GQ:DP        0|1:100:22      0|1:100:14      0|0:100:54
+10     5414314 rs7070663       C       T       .       PASS    AA=C;DP=127     GT:GQ:DP        0|1:100:22      0|1:100:14      0|0:100:92
+18     25415079        .       G       A       .       PASS    AA=G;DP=86      GT:GQ:DP        0|1:100:22      0|1:100:17      0|0:100:46
+22     33613701        rs5755396       T       C       .       PASS    AA=T;DP=111     GT:GQ:DP        0|1:100:22      0|1:100:17      0|0:100:71
+7      25590890        rs208555        G       T       .       PASS    AA=T;DP=112     GT:GQ:DP        0|1:100:22      0|1:100:18      0|0:100:71
+1      65170149        rs11208544      G       C       .       PASS    AA=N;DP=114;HM2 GT:GQ:DP        0|1:100:22      0|1:100:18      0|0:100:75
+18     25474906        rs57516314      T       G       .       PASS    AA=T;DP=89      GT:GQ:DP        0|1:100:22      0|1:100:19      0|0:100:48
+3      89394024        rs36076607      T       C       .       PASS    AA=C;DP=91      GT:GQ:DP        0|1:100:22      0|1:100:19      0|0:100:52
+8      144412546       rs58512932      G       T       .       PASS    AA=g;DP=117     GT:GQ:DP        0|1:100:22      0|1:100:19      0|0:100:71
+3      128791277       .       G       A       .       PASS    AA=g;DP=114     GT:GQ:DP        0|1:100:22      0|1:100:19      0|0:100:72
+12     8116492 rs10846450      A       T       .       PASS    AA=A;DP=111     GT:GQ:DP        0|1:100:22      0|1:100:19      0|0:75:26
+2      52116364        .       G       A       .       PASS    AA=G;DP=100     GT:GQ:DP        0|1:100:22      0|1:100:20      0|0:100:60
+7      27588530        rs1524531       A       T       .       PASS    AA=A;DP=106     GT:GQ:DP        0|1:100:22      0|1:100:20      0|0:100:63
+14     103481100       rs28592598      A       C       .       PASS    AA=C;DP=107     GT:GQ:DP        0|1:100:22      0|1:100:20      0|0:100:64
+16     80838049        rs56246554      C       T       .       PASS    AA=c;DP=124     GT:GQ:DP        0|1:100:22      0|1:100:20      0|0:100:77
+8      14675507        rs7831691       A       T       .       PASS    AA=A;DP=115     GT:GQ:DP        0|1:100:22      0|1:100:21      0|0:100:58
+4      187975603       rs62344813      A       G       .       PASS    AA=G;DP=103     GT:GQ:DP        0|1:100:22      0|1:100:21      0|0:100:60
+3      166509899       rs12107932      G       C       .       PASS    AA=G;DP=106     GT:GQ:DP        0|1:100:22      0|1:100:21      0|0:100:63
+1      170137757       rs7540873       T       G       .       PASS    AA=N;DP=112;HM2;HM3     GT:GQ:DP        0|1:100:22      0|1:100:21      0|0:100:68
+2      162599525       rs2111850       T       C       .       PASS    AA=T;DP=130     GT:GQ:DP        0|1:100:22      0|1:100:22      0|0:100:46
+10     4903541 rs7076588       C       T       .       PASS    AA=C;DP=97      GT:GQ:DP        0|1:100:22      0|1:100:22      0|0:100:57
+13     71158457        rs2192998       C       A       .       PASS    AA=C;DP=121     GT:GQ:DP        0|1:100:22      0|1:100:22      0|0:100:79
+14     44802523        rs2146007       T       A       .       PASS    AA=T;DP=106     GT:GQ:DP        0|1:100:22      0|1:100:23      0|0:100:60
+2      17229190        rs10195119      C       T       .       PASS    AA=T;DP=122     GT:GQ:DP        0|1:100:22      0|1:100:24      0|0:100:75
+14     95163919        rs17093052      T       C       .       PASS    AA=t;DP=121     GT:GQ:DP        0|1:100:22      0|1:100:24      0|0:100:76
+7      28388903        rs11768932      C       T       .       PASS    AA=T;DP=123     GT:GQ:DP        0|1:100:22      0|1:100:25      0|0:100:77
+22     46193217        rs10483235      T       C       .       PASS    AA=C;DP=140     GT:GQ:DP        0|1:100:22      0|1:100:27      0|0:100:39
+18     4322857 rs674465        C       A       .       PASS    AA=A;DP=110     GT:GQ:DP        0|1:100:22      0|1:100:27      0|0:100:60
+7      131588360       rs11762143      T       C       .       PASS    AA=C;DP=110     GT:GQ:DP        0|1:100:22      0|1:100:28      0|0:100:60
+17     46790921        rs62060127      G       A       .       PASS    AA=G;DP=126     GT:GQ:DP        0|1:100:22      0|1:100:28      0|0:100:80
+17     46364531        rs1860443       C       G       .       PASS    AA=G;DP=128     GT:GQ:DP        0|1:100:22      0|1:100:29      0|0:100:37
+6      24021507        rs806547        A       C       .       PASS    AA=C;DP=118     GT:GQ:DP        0|1:100:22      0|1:100:29      0|0:100:60
+10     26327631        rs7905635       T       G       .       PASS    AA=T;DP=111     GT:GQ:DP        0|1:100:22      0|1:100:29      0|0:100:61
+3      113822415       rs34694961      C       T       .       PASS    AA=c;DP=141     GT:GQ:DP        0|1:100:22      0|1:100:30      0|0:100:45
+10     75539760        rs7909664       T       C       .       PASS    AA=C;DP=132     GT:GQ:DP        0|1:100:22      0|1:100:30      0|0:100:79
+4      183265966       .       C       T       .       PASS    AA=C;DP=142     GT:GQ:DP        0|1:100:22      0|1:100:32      0|0:100:81
+14     81573331        .       G       C       .       PASS    AA=G;DP=147     GT:GQ:DP        0|1:100:22      0|1:100:33      0|0:100:44
+8      62130234        rs12548301      G       A       .       PASS    AA=G;DP=111     GT:GQ:DP        0|1:100:22      0|1:100:33      0|0:100:54
+7      42827842        rs660874        G       T       .       PASS    AA=G;DP=93      GT:GQ:DP        0|1:100:22      0|1:36:19       0|0:100:53
+1      37927852        rs586252        G       C       .       PASS    AA=C;DP=118     GT:GQ:DP        0|1:100:22      0|1:42:17       0|0:100:81
+13     81567407        .       A       C       .       PASS    AA=-;DP=71      GT:GQ:DP        0|1:100:22      0|1:45:14       0|0:96:35
+6      78623748        rs12212232      G       A       .       PASS    AA=g;DP=86      GT:GQ:DP        0|1:100:22      0|1:46:11       0|0:100:53
+19     54660897        rs10853810      C       T       .       PASS    AA=C;DP=94      GT:GQ:DP        0|1:100:22      0|1:55:10       0|0:100:62
+10     113648567       rs4918692       G       A       .       PASS    AA=G;DP=87      GT:GQ:DP        0|1:100:22      0|1:63:16       0|0:76:38
+7      45710392        rs2247709       G       C       .       PASS    AA=C;DP=102     GT:GQ:DP        0|1:100:22      0|1:66:12       0|0:100:72
+9      3227991 rs832308        T       A       .       PASS    AA=T;DP=85      GT:GQ:DP        0|1:100:22      0|1:78:15       0|0:100:46
+6      3668331 rs742541        C       A       .       PASS    AA=C;DP=111     GT:GQ:DP        0|1:100:22      0|1:7:15        0|0:100:78
+2      41652857        .       G       C       .       PASS    AA=G;DP=96      GT:GQ:DP        0|1:100:22      0|1:82:19       0|0:100:55
+1      235778947       rs2618660       A       G       .       PASS    AA=A;DP=104;HM2;HM3     GT:GQ:DP        0|1:100:22      0|1:86:25       0|0:100:36
+9      27865247        rs2795344       C       A       .       PASS    AA=A;DP=118     GT:GQ:DP        0|1:100:22      0|1:88:19       0|0:100:66
+11     69699335        rs10160730      T       C       .       PASS    AA=C;DP=100     GT:GQ:DP        0|1:100:22      0|1:97:19       0|0:100:59
+6      145954581       rs9497357       G       A       .       PASS    AA=G;DP=90      GT:GQ:DP        0|1:100:22      1|1:10:14       0|1:100:54
+5      121135885       rs1431946       G       T       .       PASS    AA=T;DP=74      GT:GQ:DP        0|1:100:22      1|1:15:6        0|1:100:49
+6      143636260       rs12526051      A       G       .       PASS    AA=A;DP=90      GT:GQ:DP        0|1:100:22      1|1:16:13       0|1:100:52
+14     33757126        rs10134676      T       A       .       PASS    AA=T;DP=102     GT:GQ:DP        0|1:100:22      1|1:19:15       0|1:100:68
+8      125640664       rs3793398       C       T       .       PASS    AA=T;DP=100     GT:GQ:DP        0|1:100:22      1|1:24:10       0|1:100:66
+16     8261435 rs2885090       T       G       .       PASS    AA=t;DP=94      GT:GQ:DP        0|1:100:22      1|1:24:16       0|1:100:57
+7      70305461        rs1621935       C       A       .       PASS    AA=A;DP=91      GT:GQ:DP        0|1:100:22      1|1:29:21       0|1:100:45
+13     60977047        rs12429375      A       G       .       PASS    AA=-;DP=72      GT:GQ:DP        0|1:100:22      1|1:33:12       0|1:100:37
+5      130268245       rs2014452       T       C       .       PASS    AA=C;DP=80      GT:GQ:DP        0|1:100:22      1|1:33:12       0|1:100:45
+16     87712411        rs11865614      C       T       .       PASS    AA=C;DP=93      GT:GQ:DP        0|1:100:22      1|1:33:12       0|1:100:52
+11     105068384       rs2121062       A       G       .       PASS    AA=G;DP=127     GT:GQ:DP        0|1:100:22      1|1:33:23       0|1:100:36
+12     101836623       rs9804735       C       A       .       PASS    AA=C;DP=94      GT:GQ:DP        0|1:100:22      1|1:34:27       0|1:100:46
+10     12599102        rs7091058       G       T       .       PASS    AA=T;DP=93      GT:GQ:DP        0|1:100:22      1|1:36:13       0|1:100:51
+4      73665210        rs1401141       A       G       .       PASS    AA=a;DP=95      GT:GQ:DP        0|1:100:22      1|1:36:13       0|1:100:58
+2      212263224       rs2371277       A       G       .       PASS    AA=A;DP=100     GT:GQ:DP        0|1:100:22      1|1:39:17       0|1:100:64
+11     27771726        rs12785734      A       T       .       PASS    AA=A;DP=102     GT:GQ:DP        0|1:100:22      1|1:40:21       0|1:100:61
+18     38626832        rs11872616      T       C       .       PASS    AA=t;DP=108     GT:GQ:DP        0|1:100:22      1|1:42:15       0|1:100:72
+6      124545618       rs802291        G       A       .       PASS    AA=g;DP=95      GT:GQ:DP        0|1:100:22      1|1:42:17       0|1:100:54
+1      1783646 rs7511905       A       C       .       PASS    AA=C;DP=121;HM2;HM3     GT:GQ:DP        0|1:100:22      1|1:43:22       0|1:100:81
+2      217895605       rs4359631       C       T       .       PASS    AA=-;DP=74      GT:GQ:DP        0|1:100:22      1|1:45:16       0|1:100:37
+6      4001324 rs853404        T       C       .       PASS    AA=T;DP=100     GT:GQ:DP        0|1:100:22      1|1:45:16       0|1:100:62
+1      68954555        rs1492068       A       G       .       PASS    AA=A;DP=105     GT:GQ:DP        0|1:100:22      1|1:45:16       0|1:100:69
+8      134409176       rs10956701      A       G       .       PASS    AA=G;DP=121     GT:GQ:DP        0|1:100:22      1|1:45:16       0|1:100:84
+3      166243204       rs13067742      A       C       .       PASS    AA=C;DP=86      GT:GQ:DP        0|1:100:22      1|1:48:17       0|1:100:48
+11     66646134        rs4478996       G       A       .       PASS    AA=A;DP=90      GT:GQ:DP        0|1:100:22      1|1:48:17       0|1:100:50
+11     96275542        rs12294724      A       G       .       PASS    AA=G;DP=112     GT:GQ:DP        0|1:100:22      1|1:48:18       0|1:100:59
+9      90503591        rs4997084       A       G       .       PASS    AA=A;DP=142     GT:GQ:DP        0|1:100:22      1|1:48:25       0|1:100:95
+9      114675462       rs4978509       C       G       .       PASS    AA=C;DP=100     GT:GQ:DP        0|1:100:22      1|1:51:18       0|1:100:58
+5      143369026       rs316068        A       G       .       PASS    AA=a;DP=85      GT:GQ:DP        0|1:100:22      1|1:52:23       0|1:100:26
+9      22745869        .       C       A       .       PASS    AA=C;DP=97      GT:GQ:DP        0|1:100:22      1|1:54:20       0|1:100:53
+6      99141799        rs1481437       T       A       .       PASS    AA=A;DP=100     GT:GQ:DP        0|1:100:22      1|1:57:21       0|1:100:60
+11     37544833        rs10768273      C       T       .       PASS    AA=T;DP=94      GT:GQ:DP        0|1:100:22      1|1:57:22       0|1:100:50
+11     92584878        rs1579873       T       C       .       PASS    AA=C;DP=94      GT:GQ:DP        0|1:100:22      1|1:57:22       0|1:100:53
+20     8151460 rs4399790       A       G       .       PASS    AA=G;DP=115     GT:GQ:DP        0|1:100:22      1|1:57:22       0|1:100:61
+2      149830797       rs6736863       T       G       .       PASS    AA=G;DP=79      GT:GQ:DP        0|1:100:22      1|1:5:11        0|1:100:47
+8      52078899        .       G       A       .       PASS    AA=A;DP=101     GT:GQ:DP        0|1:100:22      1|1:63:22       0|1:100:56
+12     28941104        rs10843271      T       A       .       PASS    AA=T;DP=125     GT:GQ:DP        0|1:100:22      1|1:63:25       0|1:100:33
+6      162498511       rs2023055       G       A       .       PASS    AA=A;DP=94      GT:GQ:DP        0|1:100:22      1|1:66:23       0|1:100:50
+8      15988476        rs17122424      T       C       .       PASS    AA=T;DP=99      GT:GQ:DP        0|1:100:22      1|1:66:23       0|1:100:55
+5      113614836       rs4705651       C       T       .       PASS    AA=T;DP=124     GT:GQ:DP        0|1:100:22      1|1:66:23       0|1:100:82
+21     36848488        rs425864        C       T       .       PASS    AA=C;DP=102     GT:GQ:DP        0|1:100:22      1|1:66:25       0|1:100:54
+2      151630006       rs4664909       A       G       .       PASS    AA=G;DP=115     GT:GQ:DP        0|1:100:22      1|1:69:25       0|1:100:66
+18     6879691 rs1469578       A       G       .       PASS    AA=A;DP=106     GT:GQ:DP        0|1:100:22      1|1:72:25       0|1:100:57
+7      117969739       rs2214152       C       T       .       PASS    AA=C;DP=84      GT:GQ:DP        0|1:100:22      1|1:72:26       0|1:100:25
+4      28325759        rs10016728      C       G       .       PASS    AA=C;DP=101     GT:GQ:DP        0|1:100:22      1|1:72:26       0|1:100:56
+1      152472836       rs10797061      C       T       .       PASS    AA=T;DP=115;HM2;HM3     GT:GQ:DP        0|1:100:22      1|1:72:28       0|1:100:64
+12     28891230        rs2219905       A       G       .       PASS    AA=A;DP=123     GT:GQ:DP        0|1:100:22      1|1:75:26       0|1:100:70
+5      151423546       rs6868689       G       A       .       PASS    AA=G;DP=127     GT:GQ:DP        0|1:100:22      1|1:75:26       0|1:100:78
+13     65720066        rs7328198       A       G       .       PASS    AA=G;DP=114     GT:GQ:DP        0|1:100:22      1|1:78:29       0|1:100:64
+10     82881571        .       A       G       .       PASS    AA=A;DP=126     GT:GQ:DP        0|1:100:23      0|0:100:32      0|0:100:72
+4      149136034       .       G       A       .       PASS    AA=G;DP=127     GT:GQ:DP        0|1:100:23      0|0:100:34      0|0:100:71
+4      37844380        rs6849562       C       T       .       PASS    AA=C;DP=147     GT:GQ:DP        0|1:100:23      0|0:100:35      0|0:100:48
+5      92275992        .       A       G       .       PASS    AA=A;DP=114     GT:GQ:DP        0|1:100:23      0|0:100:35      0|0:100:55
+17     36719468        rs9896492       T       C       .       PASS    AA=T;DP=147     GT:GQ:DP        0|1:100:23      0|0:100:40      0|0:100:42
+3      120992192       .       C       T       .       PASS    AA=c;DP=122     GT:GQ:DP        0|1:100:23      0|0:13:12       0|0:100:42
+8      57815924        rs11989575      C       A       .       PASS    AA=C;DP=120     GT:GQ:DP        0|1:100:23      0|0:13:12       0|0:100:46
+10     26073197        rs2367882       A       G       .       PASS    AA=G;DP=97      GT:GQ:DP        0|1:100:23      0|0:14:20       0|0:100:51
+3      179747994       .       G       A       .       PASS    AA=G;DP=98      GT:GQ:DP        0|1:100:23      0|0:23:16       0|0:100:57
+8      57482981        rs35499066      C       A       .       PASS    AA=C;DP=87      GT:GQ:DP        0|1:100:23      0|0:23:6        0|0:100:59
+13     72004964        rs13313246      A       G       .       PASS    AA=A;DP=112     GT:GQ:DP        0|1:100:23      0|0:25:14       0|0:81:27
+2      125886213       rs13398843      C       T       .       PASS    AA=T;DP=80      GT:GQ:DP        0|1:100:23      0|0:26:12       0|0:100:47
+2      13650119        .       C       T       .       PASS    AA=C;DP=77      GT:GQ:DP        0|1:100:23      0|0:26:7        0|0:100:46
+5      30958654        rs1276200       T       C       .       PASS    AA=T;DP=81      GT:GQ:DP        0|1:100:23      0|0:26:7        0|0:100:51
+8      63110041        rs62507431      C       T       .       PASS    AA=C;DP=74      GT:GQ:DP        0|1:100:23      0|0:29:10       0|0:100:41
+7      6514501 .       G       A       .       PASS    AA=a;DP=97      GT:GQ:DP        0|1:100:23      0|0:29:10       0|0:69:25
+9      73092747        rs1504390       A       T       .       PASS    AA=T;DP=111     GT:GQ:DP        0|1:100:23      0|0:29:19       0|0:100:69
+11     84227072        rs17147621      C       A       .       PASS    AA=C;DP=116     GT:GQ:DP        0|1:100:23      0|0:29:19       0|0:100:73
+2      242408557       .       C       T       .       PASS    AA=c;DP=78      GT:GQ:DP        0|1:100:23      0|0:29:8        0|0:57:37
+5      108794536       rs2914701       T       A       .       PASS    AA=T;DP=93      GT:GQ:DP        0|1:100:23      0|0:29:9        0|0:100:60
+22     47399681        .       C       T       .       PASS    AA=T;DP=104     GT:GQ:DP        0|1:100:23      0|0:32:10       0|0:100:75
+3      136299876       .       G       A       .       PASS    AA=G;DP=108     GT:GQ:DP        0|1:100:23      0|0:32:19       0|0:13:66
+5      61062900        rs834535        A       G       .       PASS    AA=G;DP=122     GT:GQ:DP        0|1:100:23      0|0:32:20       0|0:100:80
+17     77855358        .       G       T       .       PASS    AA=G;DP=71      GT:GQ:DP        0|1:100:23      0|0:32:9        0|0:99:33
+8      145476695       .       G       A       .       PASS    AA=G;DP=78      GT:GQ:DP        0|1:100:23      0|0:35:10       0|0:100:34
+4      160198394       rs35724500      T       C       .       PASS    AA=T;DP=64      GT:GQ:DP        0|1:100:23      0|0:35:10       0|0:66:22
+3      40494941        rs9831997       T       C       .       PASS    AA=.;DP=116     GT:GQ:DP        0|1:100:23      0|0:35:11       0|0:100:46
+4      59003051        rs13138011      C       G       .       PASS    AA=C;DP=65      GT:GQ:DP        0|1:100:23      0|0:35:11       0|0:63:22
+10     104672347       rs10786725      T       C       .       PASS    AA=C;DP=113     GT:GQ:DP        0|1:100:23      0|0:36:13       0|0:100:79
+12     7288955 rs1597572       T       C       .       PASS    AA=T;DP=112     GT:GQ:DP        0|1:100:23      0|0:38:11       0|0:100:75
+11     99365544        rs1901862       A       C       .       PASS    AA=A;DP=72      GT:GQ:DP        0|1:100:23      0|0:38:11       0|0:87:29
+2      3637865 .       C       G       .       PASS    AA=C;DP=100     GT:GQ:DP        0|1:100:23      0|0:38:12       0|0:100:63
+20     21523697        rs6113285       A       G       .       PASS    AA=A;DP=77      GT:GQ:DP        0|1:100:23      0|0:38:12       0|0:96:32
+3      46933816        .       A       C       .       PASS    AA=A;DP=118     GT:GQ:DP        0|1:100:23      0|0:38:22       0|0:100:74
+5      101159499       rs4703191       T       G       .       PASS    AA=T;DP=108     GT:GQ:DP        0|1:100:23      0|0:38:26       0|0:100:61
+4      180366407       rs62340380      A       G       .       PASS    AA=A;DP=82      GT:GQ:DP        0|1:100:23      0|0:40:17       0|0:100:43
+7      54193687        .       G       A       .       PASS    AA=G;DP=80      GT:GQ:DP        0|1:100:23      0|0:40:17       0|0:89:40
+17     70043446        .       G       A       .       PASS    AA=G;DP=82      GT:GQ:DP        0|1:100:23      0|0:40:18       0|0:100:41
+7      134642570       rs7780998       C       T       .       PASS    AA=c;DP=86      GT:GQ:DP        0|1:100:23      0|0:41:12       0|0:100:39
+3      38992494        .       A       G       .       PASS    AA=A;DP=92      GT:GQ:DP        0|1:100:23      0|0:41:12       0|0:100:56
+22     31110806        rs7284743       T       G       .       PASS    AA=G;DP=99      GT:GQ:DP        0|1:100:23      0|0:41:12       0|0:100:65
+16     78798964        .       T       C       .       PASS    AA=T;DP=101     GT:GQ:DP        0|1:100:23      0|0:41:12       0|0:100:66
+3      188870590       rs4988513       T       C       .       PASS    AA=T;DP=113     GT:GQ:DP        0|1:100:23      0|0:41:12       0|0:100:77
+8      84706737        rs10481217      A       G       .       PASS    AA=A;DP=117     GT:GQ:DP        0|1:100:23      0|0:41:13       0|0:100:37
+16     83525063        .       G       A       .       PASS    AA=G;DP=80      GT:GQ:DP        0|1:100:23      0|0:41:13       0|0:100:45
+22     25899513        .       G       A       .       PASS    AA=g;DP=99      GT:GQ:DP        0|1:100:23      0|0:41:13       0|0:100:64
+4      5866345 rs3733187       G       A       .       PASS    AA=G;DP=111     GT:GQ:DP        0|1:100:23      0|0:41:13       0|0:100:74
+8      16069626        rs34069166      G       T       .       PASS    AA=G;DP=127     GT:GQ:DP        0|1:100:23      0|0:41:23       0|0:100:38
+1      105816320       rs57383095      A       T       .       PASS    AA=A;DP=118     GT:GQ:DP        0|1:100:23      0|0:41:23       0|0:100:72
+7      42999128        rs55991329      G       T       .       PASS    AA=G;DP=112     GT:GQ:DP        0|1:100:23      0|0:41:27       0|0:100:64
+8      72076109        rs2035928       A       G       .       PASS    AA=G;DP=93      GT:GQ:DP        0|1:100:23      0|0:43:18       0|0:100:54
+3      68219955        rs6794683       T       C       .       PASS    AA=T;DP=125     GT:GQ:DP        0|1:100:23      0|0:43:24       0|0:100:37
+6      123330786       .       C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        0|1:100:23      0|0:43:24       0|0:100:70
+8      136834417       rs13258178      C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        0|1:100:23      0|0:43:24       0|0:100:74
+4      148042833       .       G       A       .       PASS    AA=g;DP=102     GT:GQ:DP        0|1:100:23      0|0:44:13       0|0:100:65
+21     32615076        .       C       T       .       PASS    AA=C;DP=111     GT:GQ:DP        0|1:100:23      0|0:44:13       0|0:100:76
+6      101212583       rs239230        C       A       .       PASS    AA=A;DP=105     GT:GQ:DP        0|1:100:23      0|0:44:21       0|0:100:63
+11     5420114 rs1498488       C       A       .       PASS    AA=C;DP=88      GT:GQ:DP        0|1:100:23      0|0:45:20       0|0:100:46
+14     23142405        rs222698        T       A       .       PASS    AA=T;DP=99      GT:GQ:DP        0|1:100:23      0|0:46:16       0|0:100:60
+20     32153848        .       C       T       .       PASS    AA=C;DP=91      GT:GQ:DP        0|1:100:23      0|0:46:19       0|0:100:51
+17     60494295        .       T       G       .       PASS    AA=T;DP=125     GT:GQ:DP        0|1:100:23      0|0:46:25       0|0:100:78
+9      137632677       .       G       A       .       PASS    AA=G;DP=81      GT:GQ:DP        0|1:100:23      0|0:47:14       0|0:100:44
+1      106759700       rs6677440       T       A       .       PASS    AA=T;DP=98;HM2  GT:GQ:DP        0|1:100:23      0|0:47:14       0|0:100:54
+3      130537028       rs7612685       T       C       .       PASS    AA=T;DP=124     GT:GQ:DP        0|1:100:23      0|0:47:15       0|0:100:36
+22     17758259        rs9606002       C       T       .       PASS    AA=C;DP=117     GT:GQ:DP        0|1:100:23      0|0:47:15       0|0:100:77
+16     6234338 rs62015138      A       T       .       PASS    AA=A;DP=128     GT:GQ:DP        0|1:100:23      0|0:47:15       0|0:100:91
+11     129375138       .       C       T       .       PASS    AA=C;DP=87      GT:GQ:DP        0|1:100:23      0|0:47:16       0|0:100:36
+11     95037914        rs10437578      G       A       .       PASS    AA=G;DP=92      GT:GQ:DP        0|1:100:23      0|0:47:16       0|0:100:51
+5      120995232       rs4266438       T       G       .       PASS    AA=.;DP=111     GT:GQ:DP        0|1:100:23      0|0:47:20       0|0:100:72
+3      12836800        .       G       A       .       PASS    AA=G;DP=101     GT:GQ:DP        0|1:100:23      0|0:49:20       0|0:100:55
+2      140441132       .       T       C       .       PASS    AA=T;DP=90      GT:GQ:DP        0|1:100:23      0|0:50:15       0|0:100:39
+8      83771601        .       T       G       .       PASS    AA=T;DP=88      GT:GQ:DP        0|1:100:23      0|0:50:15       0|0:100:49
+3      82904895        rs9815966       T       C       .       PASS    AA=C;DP=94      GT:GQ:DP        0|1:100:23      0|0:50:15       0|0:100:52
+16     58602743        rs9926809       A       G       .       PASS    AA=G;DP=92      GT:GQ:DP        0|1:100:23      0|0:50:15       0|0:100:53
+21     27474845        rs2830755       T       C       .       PASS    AA=T;DP=94      GT:GQ:DP        0|1:100:23      0|0:50:15       0|0:100:56
+15     44475763        .       G       T       .       PASS    AA=G;DP=87      GT:GQ:DP        0|1:100:23      0|0:50:16       0|0:100:48
+3      175366503       .       T       G       .       PASS    AA=T;DP=99      GT:GQ:DP        0|1:100:23      0|0:50:16       0|0:100:60
+3      74530857        rs6765655       A       T       .       PASS    AA=T;DP=110     GT:GQ:DP        0|1:100:23      0|0:50:16       0|0:100:70
+7      63962320        rs6460201       T       C       .       PASS    AA=T;DP=95      GT:GQ:DP        0|1:100:23      0|0:50:17       0|0:100:57
+3      1989131 .       C       T       .       PASS    AA=C;DP=124     GT:GQ:DP        0|1:100:23      0|0:50:18       0|0:100:84
+4      152541596       rs4473638       C       T       .       PASS    AA=T;DP=94      GT:GQ:DP        0|1:100:23      0|0:50:20       0|0:100:51
+6      40635046        .       G       A       .       PASS    AA=g;DP=138     GT:GQ:DP        0|1:100:23      0|0:53:16       0|0:100:101
+15     35755545        .       C       T       .       PASS    AA=C;DP=80      GT:GQ:DP        0|1:100:23      0|0:53:16       0|0:100:41
+9      108240667       .       A       C       .       PASS    AA=A;DP=89      GT:GQ:DP        0|1:100:23      0|0:53:16       0|0:100:44
+5      79437513        rs60907315      G       A       .       PASS    AA=G;DP=131     GT:GQ:DP        0|1:100:23      0|0:53:16       0|0:100:45
+3      30292440        rs62242255      C       T       .       PASS    AA=c;DP=86      GT:GQ:DP        0|1:100:23      0|0:53:16       0|0:100:46
+3      83414362        .       A       C       .       PASS    AA=A;DP=85      GT:GQ:DP        0|1:100:23      0|0:53:16       0|0:99:34
+4      6532061 rs13105491      C       T       .       PASS    AA=C;DP=94      GT:GQ:DP        0|1:100:23      0|0:53:17       0|0:100:54
+1      61563324        .       C       T       .       PASS    AA=C;DP=119     GT:GQ:DP        0|1:100:23      0|0:53:17       0|0:100:69
+8      5272999 rs17073513      G       T       .       PASS    AA=G;DP=100     GT:GQ:DP        0|1:100:23      0|0:53:17       0|0:95:60
+1      234971857       .       G       C       .       PASS    AA=G;DP=125     GT:GQ:DP        0|1:100:23      0|0:54:19       0|0:100:82
+1      208792190       .       C       A       .       PASS    AA=C;DP=124     GT:GQ:DP        0|1:100:23      0|0:55:26       0|0:100:75
+18     62541000        rs1352539       A       G       .       PASS    AA=G;DP=93      GT:GQ:DP        0|1:100:23      0|0:56:17       0|0:100:54
+17     34081049        rs8070641       G       A       .       PASS    AA=g;DP=101     GT:GQ:DP        0|1:100:23      0|0:56:17       0|0:100:58
+8      5569582 rs2733022       T       C       .       PASS    AA=C;DP=100     GT:GQ:DP        0|1:100:23      0|0:56:17       0|0:100:64
+10     118301227       .       C       T       .       PASS    AA=C;DP=107     GT:GQ:DP        0|1:100:23      0|0:56:17       0|0:100:66
+9      79610532        .       C       T       .       PASS    AA=C;DP=118     GT:GQ:DP        0|1:100:23      0|0:56:17       0|0:100:80
+12     6780652 .       A       T       .       PASS    AA=A;DP=73      GT:GQ:DP        0|1:100:23      0|0:56:17       0|0:64:29
+16     76113845        rs9937945       C       T       .       PASS    AA=C;DP=93      GT:GQ:DP        0|1:100:23      0|0:56:18       0|0:100:53
+1      39304600        rs17560427      A       G       .       PASS    AA=A;DP=106;HM2 GT:GQ:DP        0|1:100:23      0|0:56:18       0|0:100:66
+3      160778076       .       C       T       .       PASS    AA=C;DP=107     GT:GQ:DP        0|1:100:23      0|0:56:18       0|0:100:66
+11     103206164       .       T       C       .       PASS    AA=T;DP=117     GT:GQ:DP        0|1:100:23      0|0:56:18       0|0:100:76
+1      215147344       rs17044309      G       A       .       PASS    AA=G;DP=125;HM2;HM3     GT:GQ:DP        0|1:100:23      0|0:56:18       0|0:100:84
+5      145757671       rs6886412       C       T       .       PASS    AA=C;DP=124     GT:GQ:DP        0|1:100:23      0|0:56:18       0|0:100:85
+14     80680881        rs17630128      T       C       .       PASS    AA=T;DP=141     GT:GQ:DP        0|1:100:23      0|0:58:25       0|0:100:83
+6      40391837        rs7738102       C       T       .       PASS    AA=C;DP=144     GT:GQ:DP        0|1:100:23      0|0:58:29       0|0:100:54
+3      81153112        rs1595535       A       G       .       PASS    AA=a;DP=95      GT:GQ:DP        0|1:100:23      0|0:59:18       0|0:100:54
+17     48097770        rs2467508       C       T       .       PASS    AA=c;DP=99      GT:GQ:DP        0|1:100:23      0|0:59:18       0|0:100:58
+2      123031966       .       G       T       .       PASS    AA=G;DP=101     GT:GQ:DP        0|1:100:23      0|0:59:18       0|0:100:60
+3      111757080       rs62271639      G       A       .       PASS    AA=G;DP=101     GT:GQ:DP        0|1:100:23      0|0:59:18       0|0:100:60
+5      2322569 rs607960        A       G       .       PASS    AA=G;DP=117     GT:GQ:DP        0|1:100:23      0|0:59:18       0|0:100:77
+11     30240227        .       A       C       .       PASS    AA=A;DP=116     GT:GQ:DP        0|1:100:23      0|0:59:18       0|0:100:78
+18     74671948        rs4799208       T       C       .       PASS    AA=C;DP=121     GT:GQ:DP        0|1:100:23      0|0:59:18       0|0:100:79
+9      1154570 rs7864742       T       C       .       PASS    AA=N;DP=130     GT:GQ:DP        0|1:100:23      0|0:59:19       0|0:100:48
+5      63114757        rs1955278       A       C       .       PASS    AA=C;DP=113     GT:GQ:DP        0|1:100:23      0|0:59:19       0|0:100:65
+15     29192952        rs2338859       G       A       .       PASS    AA=G;DP=111     GT:GQ:DP        0|1:100:23      0|0:59:19       0|0:100:67
+20     53338788        rs17000946      T       C       .       PASS    AA=C;DP=108     GT:GQ:DP        0|1:100:23      0|0:59:19       0|0:100:67
+6      65844759        .       T       C       .       PASS    AA=T;DP=111     GT:GQ:DP        0|1:100:23      0|0:59:19       0|0:100:70
+8      24348875        .       G       C       .       PASS    AA=G;DP=96      GT:GQ:DP        0|1:100:23      0|0:59:20       0|0:100:53
+11     133829597       rs10791367      T       C       .       PASS    AA=C;DP=132     GT:GQ:DP        0|1:100:23      0|0:59:24       0|0:100:81
+2      56393894        .       A       C       .       PASS    AA=C;DP=84      GT:GQ:DP        0|1:100:23      0|0:5:11        0|0:100:51
+7      120844126       rs6947776       T       C       .       PASS    AA=t;DP=105     GT:GQ:DP        0|1:100:23      0|0:62:19       0|0:100:63
+6      64887007        .       G       T       .       PASS    AA=T;DP=104     GT:GQ:DP        0|1:100:23      0|0:62:19       0|0:100:66
+16     7706480 rs7197039       T       C       .       PASS    AA=T;DP=114     GT:GQ:DP        0|1:100:23      0|0:62:19       0|0:100:71
+16     8366166 rs11866203      A       T       .       PASS    AA=A;DP=116     GT:GQ:DP        0|1:100:23      0|0:62:19       0|0:100:73
+5      84011525        rs16901196      T       C       .       PASS    AA=T;DP=124     GT:GQ:DP        0|1:100:23      0|0:62:19       0|0:100:80
+3      107175662       rs11916931      A       G       .       PASS    AA=A;DP=74      GT:GQ:DP        0|1:100:23      0|0:62:19       0|0:96:32
+2      212741135       .       G       T       .       PASS    AA=G;DP=93      GT:GQ:DP        0|1:100:23      0|0:62:20       0|0:100:50
+6      67881640        .       C       G       .       PASS    AA=C;DP=92      GT:GQ:DP        0|1:100:23      0|0:62:20       0|0:100:50
+12     84519786        .       T       C       .       PASS    AA=T;DP=94      GT:GQ:DP        0|1:100:23      0|0:62:20       0|0:100:51
+7      96487292        rs1207731       A       C       .       PASS    AA=A;DP=103     GT:GQ:DP        0|1:100:23      0|0:62:20       0|0:100:60
+5      9285330 rs40660 C       T       .       PASS    AA=T;DP=107     GT:GQ:DP        0|1:100:23      0|0:62:20       0|0:100:63
+9      105698589       .       G       A       .       PASS    AA=G;DP=107     GT:GQ:DP        0|1:100:23      0|0:62:20       0|0:100:66
+12     53436544        rs266659        G       T       .       PASS    AA=T;DP=123     GT:GQ:DP        0|1:100:23      0|0:62:20       0|0:100:74
+7      145727378       rs1403009       G       A       .       PASS    AA=A;DP=130     GT:GQ:DP        0|1:100:23      0|0:62:21       0|0:100:39
+9      82867812        rs7859844       G       A       .       PASS    AA=G;DP=118     GT:GQ:DP        0|1:100:23      0|0:62:25       0|0:100:69
+12     108041034       .       G       T       .       PASS    AA=G;DP=120     GT:GQ:DP        0|1:100:23      0|0:62:27       0|0:100:70
+10     96460586        .       A       G       .       PASS    AA=A;DP=107     GT:GQ:DP        0|1:100:23      0|0:64:27       0|0:100:57
+1      104805320       .       G       T       .       PASS    AA=G;DP=139     GT:GQ:DP        0|1:100:23      0|0:65:20       0|0:100:45
+5      39473284        rs3849773       C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        0|1:100:23      0|0:65:20       0|0:100:53
+4      42950996        rs10018528      G       A       .       PASS    AA=G;DP=99      GT:GQ:DP        0|1:100:23      0|0:65:20       0|0:100:54
+6      76635897        rs13194557      T       C       .       PASS    AA=T;DP=97      GT:GQ:DP        0|1:100:23      0|0:65:20       0|0:100:57
+5      95501344        .       C       T       .       PASS    AA=C;DP=101     GT:GQ:DP        0|1:100:23      0|0:65:20       0|0:100:59
+20     17319164        rs62201038      C       T       .       PASS    AA=C;DP=109     GT:GQ:DP        0|1:100:23      0|0:65:20       0|0:100:64
+18     72656141        rs6420510       T       G       .       PASS    AA=T;DP=107     GT:GQ:DP        0|1:100:23      0|0:65:20       0|0:100:65
+4      59153268        rs13133561      T       C       .       PASS    AA=t;DP=110     GT:GQ:DP        0|1:100:23      0|0:65:20       0|0:100:69
+10     8464206 .       G       A       .       PASS    AA=G;DP=110     GT:GQ:DP        0|1:100:23      0|0:65:21       0|0:100:67
+1      150642870       rs11809250      T       C       .       PASS    AA=T;DP=72;HM2  GT:GQ:DP        0|1:100:23      0|0:65:21       0|0:63:21
+4      169238460       .       G       C       .       PASS    AA=G;DP=109     GT:GQ:DP        0|1:100:23      0|0:65:26       0|0:100:59
+X      1340492 rs28473024      C       G       .       PASS    AA=.;DP=83      GT:GQ:DP        0|1:100:23      0|0:68:21       0|0:100:36
+12     125723474       rs11058779      T       C       .       PASS    AA=C;DP=84      GT:GQ:DP        0|1:100:23      0|0:68:21       0|0:100:41
+2      52825992        .       G       A       .       PASS    AA=G;DP=132     GT:GQ:DP        0|1:100:23      0|0:68:21       0|0:100:42
+4      183232313       rs10026007      G       A       .       PASS    AA=G;DP=140     GT:GQ:DP        0|1:100:23      0|0:68:21       0|0:100:45
+14     87929209        .       A       C       .       PASS    AA=A;DP=91      GT:GQ:DP        0|1:100:23      0|0:68:21       0|0:100:48
+9      104485402       .       C       T       .       PASS    AA=C;DP=95      GT:GQ:DP        0|1:100:23      0|0:68:21       0|0:100:52
+9      8409299 rs55743439      G       T       .       PASS    AA=G;DP=96      GT:GQ:DP        0|1:100:23      0|0:68:21       0|0:100:52
+10     25691936        rs10828775      A       C       .       PASS    AA=A;DP=105     GT:GQ:DP        0|1:100:23      0|0:68:21       0|0:100:60
+7      147947072       .       A       G       .       PASS    AA=G;DP=105     GT:GQ:DP        0|1:100:23      0|0:68:21       0|0:100:61
+2      30334365        .       G       T       .       PASS    AA=G;DP=116     GT:GQ:DP        0|1:100:23      0|0:68:21       0|0:100:74
+2      88820911        rs17037556      T       G       .       PASS    AA=T;DP=118     GT:GQ:DP        0|1:100:23      0|0:68:21       0|0:100:76
+12     28590079        .       A       C       .       PASS    AA=A;DP=117     GT:GQ:DP        0|1:100:23      0|0:68:21       0|0:81:28
+16     3159218 .       G       C       .       PASS    AA=G;DP=108     GT:GQ:DP        0|1:100:23      0|0:68:22       0|0:100:59
+20     23425174        rs3004105       C       T       .       PASS    AA=G;DP=117     GT:GQ:DP        0|1:100:23      0|0:68:22       0|0:100:75
+16     31318686        rs2454908       C       T       .       PASS    AA=.;DP=136     GT:GQ:DP        0|1:100:23      0|0:68:22       0|0:100:87
+2      192861026       rs2581242       C       T       .       PASS    AA=C;DP=124     GT:GQ:DP        0|1:100:23      0|0:68:23       0|0:100:76
+12     5331191 rs10849244      C       G       .       PASS    AA=C;DP=99      GT:GQ:DP        0|1:100:23      0|0:6:15        0|0:100:62
+10     61999248        .       G       C       .       PASS    AA=G;DP=113     GT:GQ:DP        0|1:100:23      0|0:70:26       0|0:100:66
+2      235838758       .       G       T       .       PASS    AA=T;DP=131     GT:GQ:DP        0|1:100:23      0|0:71:22       0|0:100:45
+16     13989070        .       T       G       .       PASS    AA=T;DP=96      GT:GQ:DP        0|1:100:23      0|0:71:22       0|0:100:52
+6      78315973        rs10455109      G       A       .       PASS    AA=G;DP=103     GT:GQ:DP        0|1:100:23      0|0:71:22       0|0:100:58
+6      83640860        rs59614537      T       A       .       PASS    AA=A;DP=114     GT:GQ:DP        0|1:100:23      0|0:71:22       0|0:100:70
+5      24173153        .       A       G       .       PASS    AA=A;DP=118     GT:GQ:DP        0|1:100:23      0|0:71:22       0|0:100:72
+2      80028434        rs4143780       G       T       .       PASS    AA=G;DP=117     GT:GQ:DP        0|1:100:23      0|0:71:22       0|0:100:73
+5      66717382        rs10073380      T       A       .       PASS    AA=T;DP=124     GT:GQ:DP        0|1:100:23      0|0:71:22       0|0:100:79
+5      109938639       .       G       A       .       PASS    AA=G;DP=118     GT:GQ:DP        0|1:100:23      0|0:71:22       0|0:87:29
+4      35252806        rs17488743      G       A       .       PASS    AA=g;DP=116     GT:GQ:DP        0|1:100:23      0|0:71:22       0|0:96:33
+13     58344452        rs8001956       G       A       .       PASS    AA=G;DP=110     GT:GQ:DP        0|1:100:23      0|0:71:23       0|0:100:68
+1      232063333       rs16859739      G       A       .       PASS    AA=G;DP=120;HM2 GT:GQ:DP        0|1:100:23      0|0:71:23       0|0:100:74
+12     72364187        rs7973699       C       T       .       PASS    AA=C;DP=127     GT:GQ:DP        0|1:100:23      0|0:71:24       0|0:100:81
+4      115378227       .       T       C       .       PASS    AA=T;DP=98      GT:GQ:DP        0|1:100:23      0|0:74:23       0|0:100:40
+10     114723967       .       A       G       .       PASS    AA=A;DP=134     GT:GQ:DP        0|1:100:23      0|0:74:23       0|0:100:42
+21     21165825        rs57800817      A       G       .       PASS    AA=A;DP=97      GT:GQ:DP        0|1:100:23      0|0:74:23       0|0:100:52
+7      108652040       rs10263638      G       T       .       PASS    AA=G;DP=108     GT:GQ:DP        0|1:100:23      0|0:74:23       0|0:100:57
+17     54719382        .       T       G       .       PASS    AA=T;DP=103     GT:GQ:DP        0|1:100:23      0|0:74:23       0|0:100:58
+3      79312735        .       C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        0|1:100:23      0|0:74:23       0|0:100:64
+5      147494140       .       T       G       .       PASS    AA=T;DP=115     GT:GQ:DP        0|1:100:23      0|0:74:23       0|0:100:68
+9      82370123        .       G       A       .       PASS    AA=G;DP=123     GT:GQ:DP        0|1:100:23      0|0:74:23       0|0:100:76
+17     11780637        rs12952154      G       C       .       PASS    AA=g;DP=122     GT:GQ:DP        0|1:100:23      0|0:74:23       0|0:100:78
+2      44128001        .       C       T       .       PASS    AA=C;DP=139     GT:GQ:DP        0|1:100:23      0|0:74:23       0|0:100:94
+8      127414321       .       A       G       .       PASS    AA=A;DP=116     GT:GQ:DP        0|1:100:23      0|0:74:23       0|0:93:32
+15     94461765        .       G       A       .       PASS    AA=G;DP=112     GT:GQ:DP        0|1:100:23      0|0:74:24       0|0:100:66
+10     17211501        .       C       A       .       PASS    AA=C;DP=124     GT:GQ:DP        0|1:100:23      0|0:74:24       0|0:100:74
+18     3463859 rs12954197      A       G       .       PASS    AA=A;DP=127     GT:GQ:DP        0|1:100:23      0|0:74:24       0|0:100:79
+1      166635642       rs2268545       T       C       .       PASS    AA=T;DP=137;HM2;HM3     GT:GQ:DP        0|1:100:23      0|0:74:25       0|0:100:43
+10     109436342       rs7072703       G       A       .       PASS    AA=G;DP=113     GT:GQ:DP        0|1:100:23      0|0:74:26       0|0:100:66
+6      149249537       rs17079451      T       C       .       PASS    AA=T;DP=135     GT:GQ:DP        0|1:100:23      0|0:77:24       0|0:100:36
+5      108553986       rs13359743      T       A       .       PASS    AA=T;DP=104     GT:GQ:DP        0|1:100:23      0|0:77:24       0|0:100:61
+5      85405475        rs7719704       T       G       .       PASS    AA=T;DP=112     GT:GQ:DP        0|1:100:23      0|0:77:24       0|0:100:69
+11     20652125        .       A       C       .       PASS    AA=A;DP=120     GT:GQ:DP        0|1:100:23      0|0:77:24       0|0:100:73
+18     1960379 rs9962590       G       A       .       PASS    AA=G;DP=139     GT:GQ:DP        0|1:100:23      0|0:77:24       0|0:100:94
+5      167835385       .       A       G       .       PASS    AA=A;DP=146     GT:GQ:DP        0|1:100:23      0|0:77:24       0|0:100:95
+21     16395739        rs9979113       T       C       .       PASS    AA=T;DP=76      GT:GQ:DP        0|1:100:23      0|0:77:24       0|0:75:26
+10     64368932        rs7086519       A       G       .       PASS    AA=A;DP=125     GT:GQ:DP        0|1:100:23      0|0:77:24       0|0:96:33
+12     68605338        rs10879056      A       T       .       PASS    AA=A;DP=129     GT:GQ:DP        0|1:100:23      0|0:77:25       0|0:100:83
+19     55171976        rs722121        A       G       .       PASS    AA=A;DP=138     GT:GQ:DP        0|1:100:23      0|0:77:25       0|0:100:89
+16     51455420        rs1345328       T       C       .       PASS    AA=C;DP=135     GT:GQ:DP        0|1:100:23      0|0:77:26       0|0:100:40
+8      20440510        rs6992157       G       C       .       PASS    AA=C;DP=100     GT:GQ:DP        0|1:100:23      0|0:77:27       0|0:100:51
+1      81173316        rs11583263      T       A       .       PASS    AA=T;DP=123;HM2 GT:GQ:DP        0|1:100:23      0|0:77:33       0|0:100:67
+10     74898372        .       T       C       .       PASS    AA=T;DP=83      GT:GQ:DP        0|1:100:23      0|0:80:25       0|0:100:35
+2      216061852       rs4674000       C       T       .       PASS    AA=C;DP=114     GT:GQ:DP        0|1:100:23      0|0:80:25       0|0:100:66
+7      15497192        .       T       C       .       PASS    AA=T;DP=118     GT:GQ:DP        0|1:100:23      0|0:80:25       0|0:100:72
+4      36971756        .       T       C       .       PASS    AA=T;DP=122     GT:GQ:DP        0|1:100:23      0|0:80:25       0|0:69:23
+3      134372319       rs28539256      T       C       .       PASS    AA=T;DP=100     GT:GQ:DP        0|1:100:23      0|0:80:26       0|0:100:51
+6      79220182        rs11754966      G       A       .       PASS    AA=A;DP=90      GT:GQ:DP        0|1:100:23      0|0:80:27       0|0:90:31
+3      66748789        .       A       C       .       PASS    AA=A;DP=130     GT:GQ:DP        0|1:100:23      0|0:83:26       0|0:100:42
+16     75732300        rs11647007      T       A       .       PASS    AA=T;DP=110     GT:GQ:DP        0|1:100:23      0|0:83:26       0|0:100:59
+3      164539519       .       A       C       .       PASS    AA=A;DP=111     GT:GQ:DP        0|1:100:23      0|0:83:26       0|0:100:62
+8      119524367       rs7831534       G       A       .       PASS    AA=A;DP=127     GT:GQ:DP        0|1:100:23      0|0:83:26       0|0:100:77
+5      122628475       .       A       T       .       PASS    AA=A;DP=80      GT:GQ:DP        0|1:100:23      0|0:83:26       0|0:72:24
+13     87491348        rs9519217       G       A       .       PASS    AA=G;DP=133     GT:GQ:DP        0|1:100:23      0|0:83:27       0|0:100:81
+8      74025208        rs2975839       G       A       .       PASS    AA=G;DP=123     GT:GQ:DP        0|1:100:23      0|0:86:27       0|0:100:39
+5      19751734        .       G       A       .       PASS    AA=G;DP=108     GT:GQ:DP        0|1:100:23      0|0:86:27       0|0:100:58
+1      181860591       rs12029647      G       C       .       PASS    AA=C;DP=124     GT:GQ:DP        0|1:100:23      0|0:86:27       0|0:100:74
+1      230299903       .       A       G       .       PASS    AA=G;DP=131     GT:GQ:DP        0|1:100:23      0|0:86:27       0|0:100:85
+21     30252947        .       G       C       .       PASS    AA=G;DP=125     GT:GQ:DP        0|1:100:23      0|0:86:28       0|0:100:36
+18     74008722        rs7230659       T       C       .       PASS    AA=C;DP=107     GT:GQ:DP        0|1:100:23      0|0:86:28       0|0:100:57
+14     98949565        rs1270108       G       A       .       PASS    AA=A;DP=110     GT:GQ:DP        0|1:100:23      0|0:89:28       0|0:100:57
+15     40819701        rs60752181      G       A       .       PASS    AA=G;DP=123     GT:GQ:DP        0|1:100:23      0|0:89:28       0|0:100:72
+6      165684910       .       T       A       .       PASS    AA=T;DP=88      GT:GQ:DP        0|1:100:23      0|0:92:29       0|0:78:26
+6      79978651        rs9359369       A       G       .       PASS    AA=G;DP=125     GT:GQ:DP        0|1:100:23      0|0:92:30       0|0:100:69
+4      109279813       rs922167        C       T       .       PASS    AA=C;DP=122     GT:GQ:DP        0|1:100:23      0|0:92:30       0|0:100:71
+12     106911901       rs12230088      C       T       .       PASS    AA=N;DP=116     GT:GQ:DP        0|1:100:23      0|0:92:31       0|0:100:61
+6      90338653        .       G       A       .       PASS    AA=G;DP=116     GT:GQ:DP        0|1:100:23      0|0:92:31       0|0:100:63
+2      234949672       .       C       T       .       PASS    AA=C;DP=148     GT:GQ:DP        0|1:100:23      0|0:95:30       0|0:100:94
+1      38392130        rs748955        A       G       .       PASS    AA=a;DP=160;HM2;HM3     GT:GQ:DP        0|1:100:23      0|0:98:31       0|0:100:55
+13     106734331       .       T       C       .       PASS    AA=T;DP=125     GT:GQ:DP        0|1:100:23      0|0:98:31       0|0:100:74
+14     31964791        .       A       T       .       PASS    AA=A;DP=131     GT:GQ:DP        0|1:100:23      0|0:98:31       0|0:100:79
+2      36933087        rs62132522      T       C       .       PASS    AA=T;DP=122     GT:GQ:DP        0|1:100:23      0|0:98:31       0|0:72:24
+1      14114058        rs12029175      T       A       .       PASS    AA=T;DP=116;HM2 GT:GQ:DP        0|1:100:23      0|0:98:32       0|0:100:63
+10     125333182       .       G       C       .       PASS    AA=G;DP=124     GT:GQ:DP        0|1:100:23      0|0:98:32       0|0:100:69
+17     50251382        rs28639376      A       C       .       PASS    AA=A;DP=100     GT:GQ:DP        0|1:100:23      0|1:100:14      0|0:100:61
+8      121003750       rs10107579      G       T       .       PASS    AA=T;DP=96      GT:GQ:DP        0|1:100:23      0|1:100:16      0|0:100:55
+4      157871921       rs12650481      C       A       .       PASS    AA=C;DP=110     GT:GQ:DP        0|1:100:23      0|1:100:16      0|0:100:73
+2      136503872       rs6716536       C       T       .       PASS    AA=T;DP=118     GT:GQ:DP        0|1:100:23      0|1:100:16      0|0:87:31
+17     5239214 rs2871203       T       C       .       PASS    AA=T;DP=127     GT:GQ:DP        0|1:100:23      0|1:100:18      0|0:100:88
+8      78675555        .       A       G       .       PASS    AA=A;DP=93      GT:GQ:DP        0|1:100:23      0|1:100:19      0|0:100:40
+15     71803522        rs1351159       T       C       .       PASS    AA=C;DP=107     GT:GQ:DP        0|1:100:23      0|1:100:19      0|0:100:64
+2      7288380 rs10929470      C       T       .       PASS    AA=C;DP=91      GT:GQ:DP        0|1:100:23      0|1:100:20      0|0:100:49
+13     91786995        rs1926643       G       A       .       PASS    AA=g;DP=101     GT:GQ:DP        0|1:100:23      0|1:100:20      0|0:100:56
+12     61988697        rs11174929      G       A       .       PASS    AA=G;DP=112     GT:GQ:DP        0|1:100:23      0|1:100:20      0|0:100:71
+14     82906909        rs12891524      G       T       .       PASS    AA=G;DP=125     GT:GQ:DP        0|1:100:23      0|1:100:20      0|0:100:72
+3      142732088       rs6800122       C       T       .       PASS    AA=T;DP=114     GT:GQ:DP        0|1:100:23      0|1:100:20      0|0:100:73
+2      156569268       rs10171648      A       C       .       PASS    AA=A;DP=106     GT:GQ:DP        0|1:100:23      0|1:100:21      0|0:100:61
+12     73306468        rs822813        A       C       .       PASS    AA=A;DP=104     GT:GQ:DP        0|1:100:23      0|1:100:22      0|0:100:59
+4      189651000       rs12648691      G       A       .       PASS    AA=A;DP=128     GT:GQ:DP        0|1:100:23      0|1:100:22      0|0:100:68
+3      19002297        rs6771026       G       A       .       PASS    AA=G;DP=106     GT:GQ:DP        0|1:100:23      0|1:100:23      0|0:100:60
+5      111099005       rs3797722       T       A       .       PASS    AA=A;DP=97      GT:GQ:DP        0|1:100:23      0|1:100:24      0|0:100:49
+3      144402464       rs12492144      T       A       .       PASS    AA=T;DP=112     GT:GQ:DP        0|1:100:23      0|1:100:25      0|0:100:65
+11     102900091       rs12221807      T       C       .       PASS    AA=T;DP=106     GT:GQ:DP        0|1:100:23      0|1:100:26      0|0:100:57
+17     13515406        rs8071710       G       A       .       PASS    AA=A;DP=136     GT:GQ:DP        0|1:100:23      0|1:100:26      0|0:100:88
+7      54145609        rs12673976      A       C       .       PASS    AA=A;DP=115     GT:GQ:DP        0|1:100:23      0|1:100:28      0|0:100:61
+3      53568853        rs28713456      G       A       .       PASS    AA=C;DP=116     GT:GQ:DP        0|1:100:23      0|1:100:28      0|0:100:63
+3      39977032        rs17067132      A       G       .       PASS    AA=A;DP=133     GT:GQ:DP        0|1:100:23      0|1:100:28      0|0:100:80
+10     32130641        rs12265886      C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        0|1:100:23      0|1:100:29      0|0:100:59
+20     19581228        rs4814882       G       A       .       PASS    AA=G;DP=131     GT:GQ:DP        0|1:100:23      0|1:100:30      0|0:100:37
+4      141656304       rs1241046       C       T       .       PASS    AA=C;DP=146     GT:GQ:DP        0|1:100:23      0|1:100:33      0|0:100:46
+10     132524600       rs1703720       G       A       .       PASS    AA=G;DP=83      GT:GQ:DP        0|1:100:23      0|1:21:9        0|0:100:50
+1      148414586       .       T       C       .       PASS    AA=C;DP=105     GT:GQ:DP        0|1:100:23      0|1:29:20       0|0:100:63
+14     20170435        rs8021810       G       A       .       PASS    AA=A;DP=94      GT:GQ:DP        0|1:100:23      0|1:37:15       0|0:100:56
+5      147531479       rs7713904       C       T       .       PASS    AA=T;DP=109     GT:GQ:DP        0|1:100:23      0|1:40:22       0|0:100:62
+15     51594691        rs4633660       C       T       .       PASS    AA=T;DP=98      GT:GQ:DP        0|1:100:23      0|1:46:13       0|0:100:64
+20     59645335        rs944272        C       T       .       PASS    AA=T;DP=64      GT:GQ:DP        0|1:100:23      0|1:47:8        0|0:72:25
+2      152870993       rs4549032       G       A       .       PASS    AA=g;DP=98      GT:GQ:DP        0|1:100:23      0|1:48:18       0|0:100:56
+18     5725534 rs8097238       G       A       .       PASS    AA=A;DP=103     GT:GQ:DP        0|1:100:23      0|1:48:18       0|0:100:60
+19     57933882        rs11670853      T       A       .       PASS    AA=N;DP=134     GT:GQ:DP        0|1:100:23      0|1:48:22       0|0:100:90
+17     14585964        rs9898887       A       G       .       PASS    AA=A;DP=98      GT:GQ:DP        0|1:100:23      0|1:49:13       0|0:100:61
+5      163739247       rs10476465      T       G       .       PASS    AA=T;DP=86      GT:GQ:DP        0|1:100:23      0|1:52:19       0|0:90:31
+3      64516172        rs12635012      C       T       .       PASS    AA=C;DP=94      GT:GQ:DP        0|1:100:23      0|1:52:7        0|0:100:64
+5      77458139        rs7731602       A       G       .       PASS    AA=A;DP=113     GT:GQ:DP        0|1:100:23      0|1:54:24       0|0:100:66
+18     7357496 .       G       A       .       PASS    AA=G;DP=107     GT:GQ:DP        0|1:100:23      0|1:56:14       0|0:100:71
+6      54663884        rs925051        G       A       .       PASS    AA=G;DP=85      GT:GQ:DP        0|1:100:23      0|1:57:19       0|0:96:33
+8      97478169        rs7839974       A       G       .       PASS    AA=A;DP=111     GT:GQ:DP        0|1:100:23      0|1:59:19       0|0:100:73
+4      86350359        rs7678984       A       G       .       PASS    AA=a;DP=122     GT:GQ:DP        0|1:100:23      0|1:61:28       0|0:100:71
+6      46260298        rs11752318      T       C       .       PASS    AA=T;DP=100     GT:GQ:DP        0|1:100:23      0|1:64:25       0|0:100:52
+5      119413367       rs12521423      G       A       .       PASS    AA=A;DP=93      GT:GQ:DP        0|1:100:23      0|1:65:16       0|0:100:53
+16     53627740        rs16954134      T       A       .       PASS    AA=T;DP=135     GT:GQ:DP        0|1:100:23      0|1:73:15       0|0:100:48
+1      116721042       rs10924073      C       T       .       PASS    AA=T;DP=108;HM3 GT:GQ:DP        0|1:100:23      0|1:78:17       0|0:100:71
+21     40969780        rs1022425       G       A       .       PASS    AA=A;DP=100     GT:GQ:DP        0|1:100:23      0|1:82:15       0|0:100:63
+12     34328785        .       G       T       .       PASS    AA=.;DP=97      GT:GQ:DP        0|1:100:23      0|1:83:19       0|0:100:55
+18     65043125        rs9947171       C       G       .       PASS    AA=C;DP=123     GT:GQ:DP        0|1:100:23      0|1:83:19       0|0:100:66
+7      3620749 rs11979940      G       T       .       PASS    AA=G;DP=125     GT:GQ:DP        0|1:100:23      0|1:85:24       0|0:100:77
+14     60413882        rs10148178      G       A       .       PASS    AA=G;DP=123     GT:GQ:DP        0|1:100:23      0|1:86:19       0|0:100:80
+20     57465220        rs6026891       G       T       .       PASS    AA=G;DP=109     GT:GQ:DP        0|1:100:23      0|1:91:11       0|0:100:74
+14     46958944        rs17118585      C       G       .       PASS    AA=G;DP=77      GT:GQ:DP        0|1:100:23      0|1:91:15       0|0:100:40
+4      57273368        rs11133457      G       A       .       PASS    AA=G;DP=126     GT:GQ:DP        0|1:100:23      0|1:94:23       0|0:100:70
+11     72362546        rs12294533      T       C       .       PASS    AA=T;DP=127     GT:GQ:DP        0|1:100:23      0|1:95:21       0|0:100:42
+13     26368615        .       T       C       .       PASS    AA=C;DP=120     GT:GQ:DP        0|1:100:23      0|1:97:20       0|0:100:36
+12     34376695        .       G       A       .       PASS    AA=.;DP=86      GT:GQ:DP        0|1:100:23      0|1:9:8 0|0:100:56
+11     125549091       rs500640        G       T       .       PASS    AA=T;DP=90      GT:GQ:DP        0|1:100:23      1|1:14:15       0|1:100:53
+1      18563394        rs4920487       G       A       .       PASS    AA=G;DP=106;HM2 GT:GQ:DP        0|1:100:23      1|1:18:7        0|1:100:78
+1      185188823       rs12567071      T       G       .       PASS    AA=T;DP=85      GT:GQ:DP        0|1:100:23      1|1:20:11       0|1:100:41
+12     23446924        rs979139        T       G       .       PASS    AA=G;DP=82      GT:GQ:DP        0|1:100:23      1|1:24:20       0|1:100:39
+6      63421394        rs6453669       T       C       .       PASS    AA=C;DP=128     GT:GQ:DP        0|1:100:23      1|1:33:14       0|1:100:90
+9      27255109        rs10757646      C       A       .       PASS    AA=C;DP=79      GT:GQ:DP        0|1:100:23      1|1:36:13       0|1:100:32
+2      176358511       rs4452106       A       T       .       PASS    AA=A;DP=92      GT:GQ:DP        0|1:100:23      1|1:39:14       0|1:100:16
+10     117914002       rs10749191      G       A       .       PASS    AA=G;DP=87      GT:GQ:DP        0|1:100:23      1|1:39:14       0|1:100:39
+10     38207044        rs2799501       G       A       .       PASS    AA=A;DP=97      GT:GQ:DP        0|1:100:23      1|1:39:14       0|1:100:61
+13     63672104        rs7490606       T       C       .       PASS    AA=C;DP=101     GT:GQ:DP        0|1:100:23      1|1:39:14       0|1:100:66
+11     22254068        rs7124079       A       G       .       PASS    AA=A;DP=96      GT:GQ:DP        0|1:100:23      1|1:39:16       0|1:100:57
+1      71913299        rs10889926      T       C       .       PASS    AA=T;DP=80;HM2  GT:GQ:DP        0|1:100:23      1|1:39:18       0|1:100:31
+12     23385971        rs7134941       G       A       .       PASS    AA=A;DP=94      GT:GQ:DP        0|1:100:23      1|1:42:15       0|1:100:56
+18     13298688        rs6505797       T       C       .       PASS    AA=T;DP=116     GT:GQ:DP        0|1:100:23      1|1:42:15       0|1:100:79
+8      77157363        rs1380226       C       T       .       PASS    AA=N;DP=111     GT:GQ:DP        0|1:100:23      1|1:42:16       0|1:100:28
+11     37574152        rs10768302      C       T       .       PASS    AA=C;DP=96      GT:GQ:DP        0|1:100:23      1|1:42:16       0|1:100:57
+15     25079705        rs11630973      G       A       .       PASS    AA=G;DP=103     GT:GQ:DP        0|1:100:23      1|1:42:16       0|1:100:62
+19     53883037        rs10405097      T       C       .       PASS    AA=C;DP=103     GT:GQ:DP        0|1:100:23      1|1:42:16       0|1:100:65
+2      175098805       rs7576445       A       G       .       PASS    AA=G;DP=107     GT:GQ:DP        0|1:100:23      1|1:42:17       0|1:100:67
+2      10932189        rs6760248       G       T       .       PASS    AA=G;DP=114     GT:GQ:DP        0|1:100:23      1|1:42:22       0|1:100:68
+6      63455657        rs9352016       T       A       .       PASS    AA=T;DP=77      GT:GQ:DP        0|1:100:23      1|1:45:16       0|1:100:39
+5      150748517       rs10077700      A       T       .       PASS    AA=T;DP=85      GT:GQ:DP        0|1:100:23      1|1:45:16       0|1:100:46
+21     45414381        rs446158        G       A       .       PASS    AA=A;DP=101     GT:GQ:DP        0|1:100:23      1|1:45:16       0|1:100:60
+15     40205637        rs641601        G       A       .       PASS    AA=A;DP=107     GT:GQ:DP        0|1:100:23      1|1:45:16       0|1:100:69
+4      122623332       rs1606577       A       T       .       PASS    AA=T;DP=114     GT:GQ:DP        0|1:100:23      1|1:46:22       0|1:100:68
+2      213887413       rs6716159       C       T       .       PASS    AA=T;DP=89      GT:GQ:DP        0|1:100:23      1|1:48:17       0|1:100:49
+13     63522214        rs269655        T       C       .       PASS    AA=C;DP=92      GT:GQ:DP        0|1:100:23      1|1:51:18       0|1:100:53
+10     97465290        rs7095587       T       C       .       PASS    AA=T;DP=109     GT:GQ:DP        0|1:100:23      1|1:51:18       0|1:100:67
+4      5060533 rs4689972       C       T       .       PASS    AA=T;DP=73      GT:GQ:DP        0|1:100:23      1|1:51:19       0|1:100:23
+10     85181694        rs11592895      A       G       .       PASS    AA=A;DP=109     GT:GQ:DP        0|1:100:23      1|1:51:19       0|1:100:67
+3      20228757        rs4465959       G       A       .       PASS    AA=A;DP=106     GT:GQ:DP        0|1:100:23      1|1:54:19       0|1:100:64
+10     117322060       rs2250609       A       T       .       PASS    AA=A;DP=113     GT:GQ:DP        0|1:100:23      1|1:54:19       0|1:100:71
+3      82061747        rs1851923       G       A       .       PASS    AA=A;DP=80      GT:GQ:DP        0|1:100:23      1|1:54:20       0|1:100:27
+6      156009863       rs1353754       T       C       .       PASS    AA=C;DP=88      GT:GQ:DP        0|1:100:23      1|1:54:20       0|1:100:44
+18     68974704        rs1503028       C       T       .       PASS    AA=T;DP=100     GT:GQ:DP        0|1:100:23      1|1:57:20       0|1:100:54
+1      171131275       rs12142280      T       A       .       PASS    AA=T;DP=111     GT:GQ:DP        0|1:100:23      1|1:57:20       0|1:100:68
+7      111959550       rs725312        G       T       .       PASS    AA=G;DP=88      GT:GQ:DP        0|1:100:23      1|1:57:21       0|1:100:34
+13     60875281        rs7992318       T       A       .       PASS    AA=T;DP=94      GT:GQ:DP        0|1:100:23      1|1:57:21       0|1:100:50
+15     86397739        rs34443447      T       G       .       PASS    AA=G;DP=123     GT:GQ:DP        0|1:100:23      1|1:57:21       0|1:100:80
+8      138761427       rs4469495       A       C       .       PASS    AA=a;DP=94      GT:GQ:DP        0|1:100:23      1|1:60:21       0|1:100:46
+11     12739177        rs9888179       G       T       .       PASS    AA=T;DP=115     GT:GQ:DP        0|1:100:23      1|1:60:21       0|1:100:73
+13     105372393       rs9587020       A       C       .       PASS    AA=A;DP=128     GT:GQ:DP        0|1:100:23      1|1:60:22       0|1:100:82
+8      132019684       rs7013860       A       G       .       PASS    AA=G;DP=132     GT:GQ:DP        0|1:100:23      1|1:60:22       0|1:100:89
+3      127930393       rs6804841       G       A       .       PASS    AA=A;DP=112     GT:GQ:DP        0|1:100:23      1|1:63:22       0|1:100:68
+4      96342489        rs3775053       T       C       .       PASS    AA=C;DP=119     GT:GQ:DP        0|1:100:23      1|1:63:24       0|1:100:75
+1      107028586       rs4342878       T       A       .       PASS    AA=T;DP=115;HM3 GT:GQ:DP        0|1:100:23      1|1:66:23       0|1:100:34
+11     101459510       rs6590945       G       T       .       PASS    AA=T;DP=106     GT:GQ:DP        0|1:100:23      1|1:66:23       0|1:100:60
+15     79887529        rs28541667      C       G       .       PASS    AA=G;DP=112     GT:GQ:DP        0|1:100:23      1|1:66:23       0|1:100:66
+20     12400159        rs4814122       G       A       .       PASS    AA=G;DP=119     GT:GQ:DP        0|1:100:23      1|1:66:23       0|1:100:72
+12     125805014       rs1798817       C       T       .       PASS    AA=T;DP=102     GT:GQ:DP        0|1:100:23      1|1:66:31       0|1:100:47
+7      125286194       .       G       T       .       PASS    AA=G;DP=93      GT:GQ:DP        0|1:100:23      1|1:69:24       0|1:100:46
+16     82327227        rs391794        T       C       .       PASS    AA=C;DP=115     GT:GQ:DP        0|1:100:23      1|1:69:24       0|1:100:68
+13     98342134        rs1324982       T       C       .       PASS    AA=C;DP=112     GT:GQ:DP        0|1:100:23      1|1:69:26       0|1:100:63
+7      13206843        rs194019        G       A       .       PASS    AA=A;DP=101     GT:GQ:DP        0|1:100:23      1|1:72:25       0|1:100:52
+18     56465128        rs9946324       T       C       .       PASS    AA=T;DP=121     GT:GQ:DP        0|1:100:23      1|1:72:25       0|1:100:74
+10     78984576        rs816864        C       T       .       PASS    AA=C;DP=131     GT:GQ:DP        0|1:100:23      1|1:72:26       0|1:100:82
+10     111551662       .       A       G       .       PASS    AA=G;DP=112     GT:GQ:DP        0|1:100:23      1|1:72:28       0|1:100:61
+18     4425939 rs9959501       C       T       .       PASS    AA=C;DP=111     GT:GQ:DP        0|1:100:23      1|1:73:32       0|1:100:57
+12     20075735        rs2579211       A       T       .       PASS    AA=T;DP=114     GT:GQ:DP        0|1:100:23      1|1:75:26       0|1:100:66
+14     96597103        rs1683118       A       G       .       PASS    AA=A;DP=97      GT:GQ:DP        0|1:100:23      1|1:75:27       0|1:10:46
+10     107792980       rs7903314       T       A       .       PASS    AA=A;DP=115     GT:GQ:DP        0|1:100:23      1|1:78:27       0|1:100:52
+4      142162929       rs1364889       T       C       .       PASS    AA=C;DP=113     GT:GQ:DP        0|1:100:23      1|1:78:29       0|1:100:62
+10     54504472        rs7897881       C       T       .       PASS    AA=N;DP=97      GT:GQ:DP        0|1:100:23      1|1:9:14        0|1:100:57
+18     44415969        rs12955352      T       C       .       PASS    AA=C;DP=121     GT:GQ:DP        0|1:100:24      0|0:100:32      0|0:100:66
+10     43834801        .       A       T       .       PASS    AA=A;DP=120     GT:GQ:DP        0|1:100:24      0|0:100:32      0|0:100:67
+7      54836729        .       G       A       .       PASS    AA=G;DP=136     GT:GQ:DP        0|1:100:24      0|0:100:32      0|0:100:79
+9      87870961        .       G       A       .       PASS    AA=G;DP=132     GT:GQ:DP        0|1:100:24      0|0:100:32      0|0:87:29
+3      112511280       rs7648997       T       A       .       PASS    AA=T;DP=115     GT:GQ:DP        0|1:100:24      0|0:100:33      0|0:100:45
+10     4544674 rs11252571      T       C       .       PASS    AA=T;DP=118     GT:GQ:DP        0|1:100:24      0|0:100:33      0|0:100:62
+12     53130084        .       T       C       .       PASS    AA=T;DP=129     GT:GQ:DP        0|1:100:24      0|0:100:33      0|0:100:73
+1      180465438       rs16858659      G       A       .       PASS    AA=G;DP=134;HM2;HM3     GT:GQ:DP        0|1:100:24      0|0:100:35      0|0:100:76
+18     32115834        rs10432179      G       A       .       PASS    AA=A;DP=142     GT:GQ:DP        0|1:100:24      0|0:100:35      0|0:100:83
+11     24643174        rs4592420       T       C       .       PASS    AA=C;DP=154     GT:GQ:DP        0|1:100:24      0|0:100:37      0|0:100:51
+6      143973056       rs9386040       C       T       .       PASS    AA=C;DP=116     GT:GQ:DP        0|1:100:24      0|0:100:38      0|0:100:56
+13     83030587        rs7323076       T       A       .       PASS    AA=T;DP=124     GT:GQ:DP        0|1:100:24      0|0:100:38      0|0:100:61
+12     57271019        .       C       G       .       PASS    AA=C;DP=138     GT:GQ:DP        0|1:100:24      0|0:100:38      0|0:100:75
+15     97791366        .       A       G       .       PASS    AA=G;DP=86      GT:GQ:DP        0|1:100:24      0|0:17:9        0|0:100:49
+8      32295488        rs9886483       C       A       .       PASS    AA=C;DP=93      GT:GQ:DP        0|1:100:24      0|0:24:17       0|0:100:51
+3      58547588        .       C       T       .       PASS    AA=C;DP=75      GT:GQ:DP        0|1:100:24      0|0:26:7        0|0:100:36
+4      94067143        .       T       C       .       PASS    AA=T;DP=97      GT:GQ:DP        0|1:100:24      0|0:29:14       0|0:100:57
+6      41553236        .       G       C       .       PASS    AA=G;DP=123     GT:GQ:DP        0|1:100:24      0|0:29:19       0|0:100:82
+11     11157758        rs2655075       C       A       .       PASS    AA=C;DP=104     GT:GQ:DP        0|1:100:24      0|0:29:21       0|0:100:61
+10     66190210        rs16920339      C       A       .       PASS    AA=C;DP=106     GT:GQ:DP        0|1:100:24      0|0:30:23       0|0:100:60
+3      85740892        rs1375562       G       A       .       PASS    AA=A;DP=131     GT:GQ:DP        0|1:100:24      0|0:32:20       0|0:100:48
+3      292916  .       T       C       .       PASS    AA=T;DP=83      GT:GQ:DP        0|1:100:24      0|0:34:15       0|0:100:42
+7      1335185 .       A       G       .       PASS    AA=a;DP=94      GT:GQ:DP        0|1:100:24      0|0:34:16       0|0:100:54
+3      77255422        rs7618319       G       T       .       PASS    AA=G;DP=68      GT:GQ:DP        0|1:100:24      0|0:35:10       0|0:100:36
+7      116542221       .       G       A       .       PASS    AA=G;DP=95      GT:GQ:DP        0|1:100:24      0|0:35:10       0|0:100:62
+13     111713519       rs11843771      G       T       .       PASS    AA=g;DP=105     GT:GQ:DP        0|1:100:24      0|0:35:10       0|0:100:69
+14     55782875        .       C       A       .       PASS    AA=C;DP=106     GT:GQ:DP        0|1:100:24      0|0:35:20       0|0:100:64
+3      4910489 .       A       C       .       PASS    AA=A;DP=111     GT:GQ:DP        0|1:100:24      0|0:35:21       0|0:100:65
+13     25619235        rs9581560       A       C       .       PASS    AA=A;DP=120     GT:GQ:DP        0|1:100:24      0|0:35:21       0|0:100:77
+7      107535551       .       A       G       .       PASS    AA=A;DP=104     GT:GQ:DP        0|1:100:24      0|0:38:11       0|0:100:69
+13     90610941        rs9589121       G       A       .       PASS    AA=G;DP=113     GT:GQ:DP        0|1:100:24      0|0:38:11       0|0:100:79
+16     56810344        rs2550370       C       T       .       PASS    AA=T;DP=113     GT:GQ:DP        0|1:100:24      0|0:38:12       0|0:100:79
+2      20209195        rs10193851      C       T       .       PASS    AA=C;DP=105     GT:GQ:DP        0|1:100:24      0|0:38:13       0|0:100:67
+1      60587330        rs17120548      G       A       .       PASS    AA=A;DP=107;HM2;HM3     GT:GQ:DP        0|1:100:24      0|0:38:22       0|0:100:63
+2      15439223        .       A       G       .       PASS    AA=A;DP=129     GT:GQ:DP        0|1:100:24      0|0:40:20       0|0:100:43
+1      10834576        .       C       T       .       PASS    AA=C;DP=89      GT:GQ:DP        0|1:100:24      0|0:41:12       0|0:100:48
+7      37630527        rs1450188       G       A       .       PASS    AA=G;DP=121     GT:GQ:DP        0|1:100:24      0|0:41:13       0|0:100:84
+8      58128878        rs17189921      G       C       .       PASS    AA=G;DP=109     GT:GQ:DP        0|1:100:24      0|0:41:17       0|0:100:67
+9      79876676        rs10781486      C       T       .       PASS    AA=T;DP=107     GT:GQ:DP        0|1:100:24      0|0:41:24       0|0:100:49
+18     20813720        .       C       T       .       PASS    AA=c;DP=107     GT:GQ:DP        0|1:100:24      0|0:42:21       0|0:100:62
+7      150435506       .       C       T       .       PASS    AA=C;DP=101     GT:GQ:DP        0|1:100:24      0|0:42:23       0|0:100:57
+13     53923098        .       T       A       .       PASS    AA=T;DP=92      GT:GQ:DP        0|1:100:24      0|0:43:24       0|0:100:46
+12     118784301       .       A       C       .       PASS    AA=C;DP=112     GT:GQ:DP        0|1:100:24      0|0:44:13       0|0:100:75
+2      15179686        rs11886227      C       T       .       PASS    AA=c;DP=114     GT:GQ:DP        0|1:100:24      0|0:44:14       0|0:100:37
+16     83848871        .       G       A       .       PASS    AA=g;DP=102     GT:GQ:DP        0|1:100:24      0|0:44:14       0|0:100:63
+10     822351  .       G       A       .       PASS    AA=g;DP=74      GT:GQ:DP        0|1:100:24      0|0:44:14       0|0:84:29
+22     16085196        rs9606659       C       G       .       PASS    AA=C;DP=113     GT:GQ:DP        0|1:100:24      0|0:44:16       0|0:100:73
+11     73659337        .       C       T       .       PASS    AA=C;DP=119     GT:GQ:DP        0|1:100:24      0|0:44:19       0|0:100:35
+5      130025406       rs10463878      C       A       .       PASS    AA=C;DP=126     GT:GQ:DP        0|1:100:24      0|0:44:28       0|0:100:77
+9      136702762       .       G       A       .       PASS    AA=G;DP=132     GT:GQ:DP        0|1:100:24      0|0:47:14       0|0:100:52
+2      49554361        rs2204652       A       T       .       PASS    AA=T;DP=94      GT:GQ:DP        0|1:100:24      0|0:47:14       0|0:100:60
+6      128105715       rs7774647       G       C       .       PASS    AA=C;DP=111     GT:GQ:DP        0|1:100:24      0|0:47:14       0|0:100:73
+5      98574158        .       T       C       .       PASS    AA=t;DP=106     GT:GQ:DP        0|1:100:24      0|0:47:16       0|0:100:66
+7      131342763       .       G       A       .       PASS    AA=G;DP=111     GT:GQ:DP        0|1:100:24      0|0:47:16       0|0:100:72
+1      227534653       rs151470        C       G       .       PASS    AA=G;DP=95;HM3  GT:GQ:DP        0|1:100:24      0|0:50:15       0|0:100:53
+3      26929175        rs56120106      T       C       .       PASS    AA=T;DP=91      GT:GQ:DP        0|1:100:24      0|0:50:15       0|0:100:54
+16     54366499        rs28549231      T       A       .       PASS    AA=T;DP=104     GT:GQ:DP        0|1:100:24      0|0:50:15       0|0:100:65
+1      9587409 rs1128651       T       C       .       PASS    AA=C;DP=106     GT:GQ:DP        0|1:100:24      0|0:50:15       0|0:100:67
+11     953936  rs7123912       T       C       .       PASS    AA=T;DP=109     GT:GQ:DP        0|1:100:24      0|0:50:15       0|0:100:69
+12     125158179       rs10847088      A       T       .       PASS    AA=A;DP=111     GT:GQ:DP        0|1:100:24      0|0:50:15       0|0:100:74
+4      82036426        .       A       G       .       PASS    AA=A;DP=68      GT:GQ:DP        0|1:100:24      0|0:50:15       0|0:54:18
+5      112529590       rs6866874       G       A       .       PASS    AA=G;DP=99      GT:GQ:DP        0|1:100:24      0|0:50:16       0|0:100:57
+3      85648778        rs2122236       T       G       .       PASS    AA=T;DP=101     GT:GQ:DP        0|1:100:24      0|0:50:16       0|0:100:61
+11     57106162        rs2649645       G       A       .       PASS    AA=G;DP=117     GT:GQ:DP        0|1:100:24      0|0:50:16       0|0:100:77
+13     42315312        .       G       T       .       PASS    AA=G;DP=109     GT:GQ:DP        0|1:100:24      0|0:52:22       0|0:100:64
+1      99410545        .       T       C       .       PASS    AA=T;DP=105     GT:GQ:DP        0|1:100:24      0|0:52:27       0|0:100:54
+13     22365552        rs2335560       G       A       .       PASS    AA=g;DP=91      GT:GQ:DP        0|1:100:24      0|0:53:16       0|0:100:39
+8      32515310        .       T       G       .       PASS    AA=T;DP=90      GT:GQ:DP        0|1:100:24      0|0:53:16       0|0:100:40
+11     10412855        .       C       T       .       PASS    AA=T;DP=101     GT:GQ:DP        0|1:100:24      0|0:53:16       0|0:100:56
+1      207617084       rs1006316       T       C       .       PASS    AA=T;DP=98;HM2;HM3      GT:GQ:DP        0|1:100:24      0|0:53:16       0|0:100:58
+7      137762172       rs2883142       G       A       .       PASS    AA=G;DP=100     GT:GQ:DP        0|1:100:24      0|0:53:16       0|0:100:59
+8      14059959        rs1382144       T       C       .       PASS    AA=T;DP=104     GT:GQ:DP        0|1:100:24      0|0:53:16       0|0:100:64
+13     57318403        .       A       G       .       PASS    AA=A;DP=105     GT:GQ:DP        0|1:100:24      0|0:53:16       0|0:100:65
+15     45346429        .       T       G       .       PASS    AA=T;DP=109     GT:GQ:DP        0|1:100:24      0|0:53:16       0|0:100:68
+3      88335107        rs7432751       A       G       .       PASS    AA=A;DP=107     GT:GQ:DP        0|1:100:24      0|0:53:16       0|0:100:68
+15     75006121        rs7179043       C       T       .       PASS    AA=C;DP=118     GT:GQ:DP        0|1:100:24      0|0:53:16       0|0:100:77
+20     42513202        .       C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        0|1:100:24      0|0:53:16       0|0:100:77
+7      134990200       .       C       T       .       PASS    AA=T;DP=119     GT:GQ:DP        0|1:100:24      0|0:53:16       0|0:100:80
+7      157610109       .       G       A       .       PASS    AA=G;DP=129     GT:GQ:DP        0|1:100:24      0|0:53:16       0|0:100:92
+10     2079337 .       C       T       .       PASS    AA=C;DP=89      GT:GQ:DP        0|1:100:24      0|0:53:17       0|0:100:50
+15     95880221        rs1500631       T       C       .       PASS    AA=T;DP=103     GT:GQ:DP        0|1:100:24      0|0:53:17       0|0:100:64
+13     91720758        rs12874185      A       G       .       PASS    AA=G;DP=112     GT:GQ:DP        0|1:100:24      0|0:53:17       0|0:100:72
+19     46065873        rs6508950       C       T       .       PASS    AA=t;DP=123     GT:GQ:DP        0|1:100:24      0|0:53:18       0|0:100:39
+5      81540785        rs12173237      G       A       .       PASS    AA=G;DP=94      GT:GQ:DP        0|1:100:24      0|0:53:18       0|0:100:52
+10     16757925        .       G       A       .       PASS    AA=G;DP=116     GT:GQ:DP        0|1:100:24      0|0:53:18       0|0:100:73
+1      145176501       rs7537483       C       G       .       PASS    AA=C;DP=131;HM2;HM3     GT:GQ:DP        0|1:100:24      0|0:53:19       0|0:100:42
+13     99838057        rs9554684       C       T       .       PASS    AA=C;DP=122     GT:GQ:DP        0|1:100:24      0|0:54:32       0|0:100:68
+4      129795644       .       T       C       .       PASS    AA=T;DP=137     GT:GQ:DP        0|1:100:24      0|0:55:28       0|0:100:39
+4      15843822        .       C       A       .       PASS    AA=C;DP=91      GT:GQ:DP        0|1:100:24      0|0:56:17       0|0:100:49
+7      123553371       rs34733968      A       G       .       PASS    AA=G;DP=93      GT:GQ:DP        0|1:100:24      0|0:56:17       0|0:100:50
+2      50289235        rs57411637      G       A       .       PASS    AA=G;DP=106     GT:GQ:DP        0|1:100:24      0|0:56:17       0|0:100:66
+6      67067918        rs7742083       C       G       .       PASS    AA=C;DP=115     GT:GQ:DP        0|1:100:24      0|0:56:17       0|0:100:75
+7      107401239       rs4727695       A       G       .       PASS    AA=A;DP=119     GT:GQ:DP        0|1:100:24      0|0:56:17       0|0:100:80
+19     11946817        rs17001734      A       G       .       PASS    AA=-;DP=136     GT:GQ:DP        0|1:100:24      0|0:56:18       0|0:100:49
+1      224405970       .       C       T       .       PASS    AA=C;DP=101     GT:GQ:DP        0|1:100:24      0|0:56:18       0|0:100:57
+18     10904547        rs9948005       C       A       .       PASS    AA=c;DP=106     GT:GQ:DP        0|1:100:24      0|0:56:18       0|0:100:63
+6      104077194       rs9485849       G       A       .       PASS    AA=N;DP=107     GT:GQ:DP        0|1:100:24      0|0:56:19       0|0:100:49
+4      80968131        .       G       A       .       PASS    AA=G;DP=124     GT:GQ:DP        0|1:100:24      0|0:56:19       0|0:100:79
+1      22356171        rs2744701       G       A       .       PASS    AA=G;DP=120     GT:GQ:DP        0|1:100:24      0|0:56:20       0|0:100:78
+9      116257098       rs1535968       G       A       .       PASS    AA=-;DP=115     GT:GQ:DP        0|1:100:24      0|0:58:24       0|0:100:69
+7      30021149        rs57981260      C       A       .       PASS    AA=A;DP=90      GT:GQ:DP        0|1:100:24      0|0:59:18       0|0:100:47
+8      106658484       rs13281018      T       C       .       PASS    AA=C;DP=108     GT:GQ:DP        0|1:100:24      0|0:59:18       0|0:100:54
+10     68031212        .       G       T       .       PASS    AA=G;DP=99      GT:GQ:DP        0|1:100:24      0|0:59:18       0|0:100:56
+4      118874719       rs57844506      A       G       .       PASS    AA=G;DP=98      GT:GQ:DP        0|1:100:24      0|0:59:18       0|0:100:57
+20     48734428        rs4809807       A       G       .       PASS    AA=G;DP=102     GT:GQ:DP        0|1:100:24      0|0:59:18       0|0:100:60
+10     119705520       .       T       C       .       PASS    AA=T;DP=102     GT:GQ:DP        0|1:100:24      0|0:59:18       0|0:100:62
+14     93439196        rs12433403      A       G       .       PASS    AA=A;DP=114     GT:GQ:DP        0|1:100:24      0|0:59:18       0|0:100:73
+2      42214630        .       T       C       .       PASS    AA=T;DP=111     GT:GQ:DP        0|1:100:24      0|0:59:18       0|0:100:74
+5      37309793        rs216384        C       A       .       PASS    AA=c;DP=110     GT:GQ:DP        0|1:100:24      0|0:59:18       0|0:87:29
+8      47552448        rs4319105       T       C       .       PASS    AA=.;DP=115     GT:GQ:DP        0|1:100:24      0|0:59:18       0|0:90:30
+11     110394501       .       C       T       .       PASS    AA=C;DP=103     GT:GQ:DP        0|1:100:24      0|0:59:19       0|0:100:60
+2      14893847        .       G       A       .       PASS    AA=G;DP=113     GT:GQ:DP        0|1:100:24      0|0:59:19       0|0:100:65
+19     62588546        rs12978934      G       A       .       PASS    AA=G;DP=113     GT:GQ:DP        0|1:100:24      0|0:59:19       0|0:100:71
+8      60933809        .       C       T       .       PASS    AA=c;DP=133     GT:GQ:DP        0|1:100:24      0|0:59:25       0|0:100:40
+15     90983053        .       G       A       .       PASS    AA=G;DP=137     GT:GQ:DP        0|1:100:24      0|0:59:25       0|0:100:43
+7      145685283       rs12703801      G       A       .       PASS    AA=G;DP=101     GT:GQ:DP        0|1:100:24      0|0:59:25       0|0:100:54
+6      93969835        .       G       A       .       PASS    AA=G;DP=119     GT:GQ:DP        0|1:100:24      0|0:60:30       0|0:100:63
+11     48160560        rs9633889       T       C       .       PASS    AA=C;DP=108     GT:GQ:DP        0|1:100:24      0|0:61:26       0|0:100:59
+8      123765116       .       G       A       .       PASS    AA=G;DP=145     GT:GQ:DP        0|1:100:24      0|0:61:28       0|0:100:91
+11     96934632        .       A       G       .       PASS    AA=A;DP=126     GT:GQ:DP        0|1:100:24      0|0:62:19       0|0:100:36
+4      117480770       rs7675907       T       C       .       PASS    AA=t;DP=85      GT:GQ:DP        0|1:100:24      0|0:62:19       0|0:100:42
+13     104007997       .       T       C       .       PASS    AA=T;DP=95      GT:GQ:DP        0|1:100:24      0|0:62:19       0|0:100:51
+9      116988293       .       T       C       .       PASS    AA=T;DP=92      GT:GQ:DP        0|1:100:24      0|0:62:19       0|0:100:53
+5      28689040        rs12653522      A       G       .       PASS    AA=G;DP=98      GT:GQ:DP        0|1:100:24      0|0:62:19       0|0:100:54
+4      166824666       .       T       C       .       PASS    AA=T;DP=103     GT:GQ:DP        0|1:100:24      0|0:62:19       0|0:100:60
+18     64041270        rs656210        C       T       .       PASS    AA=C;DP=109     GT:GQ:DP        0|1:100:24      0|0:62:19       0|0:100:62
+6      133438141       .       G       A       .       PASS    AA=g;DP=105     GT:GQ:DP        0|1:100:24      0|0:62:19       0|0:100:63
+5      86824587        rs323787        C       T       .       PASS    AA=T;DP=118     GT:GQ:DP        0|1:100:24      0|0:62:19       0|0:100:64
+5      133304800       rs6875711       G       T       .       PASS    AA=G;DP=109     GT:GQ:DP        0|1:100:24      0|0:62:19       0|0:100:66
+15     99155799        rs6598385       A       G       .       PASS    AA=A;DP=114     GT:GQ:DP        0|1:100:24      0|0:62:19       0|0:100:70
+7      130432483       .       T       C       .       PASS    AA=T;DP=124     GT:GQ:DP        0|1:100:24      0|0:62:19       0|0:100:81
+6      12204158        .       A       T       .       PASS    AA=A;DP=116     GT:GQ:DP        0|1:100:24      0|0:62:19       0|0:96:32
+2      124432382       rs1214063       G       A       .       PASS    AA=G;DP=105     GT:GQ:DP        0|1:100:24      0|0:62:20       0|0:100:58
+22     31536443        rs5749517       C       T       .       PASS    AA=C;DP=106     GT:GQ:DP        0|1:100:24      0|0:62:20       0|0:100:66
+4      62867861        .       C       T       .       PASS    AA=C;DP=118     GT:GQ:DP        0|1:100:24      0|0:62:20       0|0:100:77
+9      5209435 rs10283692      C       G       .       PASS    AA=c;DP=122     GT:GQ:DP        0|1:100:24      0|0:62:20       0|0:100:78
+9      119554103       rs10739500      A       T       .       PASS    AA=A;DP=120     GT:GQ:DP        0|1:100:24      0|0:62:21       0|0:100:77
+4      184222513       rs2714517       C       T       .       PASS    AA=T;DP=119     GT:GQ:DP        0|1:100:24      0|0:63:25       0|0:100:59
+1      24491703        rs61241247      C       T       .       PASS    AA=C;DP=123     GT:GQ:DP        0|1:100:24      0|0:64:25       0|0:100:76
+5      125151015       rs172938        G       T       .       PASS    AA=G;DP=127     GT:GQ:DP        0|1:100:24      0|0:64:26       0|0:100:77
+18     59687862        .       G       A       .       PASS    AA=G;DP=127     GT:GQ:DP        0|1:100:24      0|0:65:20       0|0:100:39
+3      69342849        rs4635709       G       C       .       PASS    AA=g;DP=97      GT:GQ:DP        0|1:100:24      0|0:65:20       0|0:100:52
+11     89050111        rs3018758       C       T       .       PASS    AA=T;DP=103     GT:GQ:DP        0|1:100:24      0|0:65:20       0|0:100:59
+5      115396909       rs2662453       T       C       .       PASS    AA=C;DP=105     GT:GQ:DP        0|1:100:24      0|0:65:20       0|0:100:63
+2      37416296        rs13030789      G       A       .       PASS    AA=G;DP=107     GT:GQ:DP        0|1:100:24      0|0:65:20       0|0:100:65
+5      4228080 rs2895184       T       C       .       PASS    AA=C;DP=114     GT:GQ:DP        0|1:100:24      0|0:65:20       0|0:100:70
+7      152382294       .       C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        0|1:100:24      0|0:65:20       0|0:100:73
+15     48986471        .       G       A       .       PASS    AA=G;DP=118     GT:GQ:DP        0|1:100:24      0|0:65:20       0|0:100:78
+17     13966771        .       T       C       .       PASS    AA=T;DP=116     GT:GQ:DP        0|1:100:24      0|0:65:20       0|0:96:33
+3      1462218 rs34744789      A       G       .       PASS    AA=A;DP=94      GT:GQ:DP        0|1:100:24      0|0:65:21       0|0:100:49
+14     37262529        .       C       T       .       PASS    AA=C;DP=104     GT:GQ:DP        0|1:100:24      0|0:65:21       0|0:100:58
+10     11246287        rs619030        G       A       .       PASS    AA=G;DP=112     GT:GQ:DP        0|1:100:24      0|0:65:21       0|0:100:67
+1      115451385       .       C       T       .       PASS    AA=c;DP=122     GT:GQ:DP        0|1:100:24      0|0:65:21       0|0:100:78
+8      6192416 rs2916711       C       G       .       PASS    AA=g;DP=132     GT:GQ:DP        0|1:100:24      0|0:65:21       0|0:100:89
+5      125891620       rs10053600      A       C       .       PASS    AA=C;DP=117     GT:GQ:DP        0|1:100:24      0|0:65:21       0|0:87:30
+6      33460038        .       G       A       .       PASS    AA=G;DP=107     GT:GQ:DP        0|1:100:24      0|0:65:22       0|0:100:62
+17     13349608        rs17880140      G       T       .       PASS    AA=G;DP=121     GT:GQ:DP        0|1:100:24      0|0:65:22       0|0:100:73
+3      59721732        rs9826481       A       G       .       PASS    AA=A;DP=125     GT:GQ:DP        0|1:100:24      0|0:65:27       0|0:100:74
+8      15917140        rs2898430       C       T       .       PASS    AA=T;DP=151     GT:GQ:DP        0|1:100:24      0|0:65:28       0|0:95:39
+3      54562955        .       T       C       .       PASS    AA=T;DP=99      GT:GQ:DP        0|1:100:24      0|0:68:21       0|0:100:52
+9      30878235        rs10969941      T       C       .       PASS    AA=T;DP=97      GT:GQ:DP        0|1:100:24      0|0:68:21       0|0:100:53
+7      107238358       .       T       C       .       PASS    AA=T;DP=101     GT:GQ:DP        0|1:100:24      0|0:68:21       0|0:100:56
+8      90887759        rs11989430      A       T       .       PASS    AA=A;DP=117     GT:GQ:DP        0|1:100:24      0|0:68:21       0|0:100:75
+5      19961344        rs7380874       C       G       .       PASS    AA=C;DP=125     GT:GQ:DP        0|1:100:24      0|0:68:21       0|0:100:82
+18     31688749        .       C       T       .       PASS    AA=C;DP=128     GT:GQ:DP        0|1:100:24      0|0:68:22       0|0:100:37
+10     99704584        .       C       T       .       PASS    AA=C;DP=102     GT:GQ:DP        0|1:100:24      0|0:68:22       0|0:100:56
+5      146934697       rs17106902      C       A       .       PASS    AA=C;DP=102     GT:GQ:DP        0|1:100:24      0|0:68:22       0|0:100:56
+4      93853972        .       G       A       .       PASS    AA=G;DP=111     GT:GQ:DP        0|1:100:24      0|0:68:22       0|0:100:64
+12     16027740        rs7301938       G       A       .       PASS    AA=A;DP=113     GT:GQ:DP        0|1:100:24      0|0:68:22       0|0:100:69
+8      27997018        rs61573349      T       G       .       PASS    AA=T;DP=124     GT:GQ:DP        0|1:100:24      0|0:68:22       0|0:100:77
+8      80268456        .       T       C       .       PASS    AA=T;DP=123     GT:GQ:DP        0|1:100:24      0|0:68:22       0|0:100:77
+3      27996143        rs12487027      G       A       .       PASS    AA=A;DP=119     GT:GQ:DP        0|1:100:24      0|0:68:23       0|0:100:58
+8      15049155        .       C       T       .       PASS    AA=C;DP=105     GT:GQ:DP        0|1:100:24      0|0:68:23       0|0:100:60
+7      21385791        rs9986975       G       A       .       PASS    AA=g;DP=107     GT:GQ:DP        0|1:100:24      0|0:68:23       0|0:100:61
+16     62981460        .       A       G       .       PASS    AA=A;DP=110     GT:GQ:DP        0|1:100:24      0|0:68:23       0|0:100:63
+20     40843315        rs13042473      T       G       .       PASS    AA=T;DP=114     GT:GQ:DP        0|1:100:24      0|0:68:23       0|0:100:69
+8      23979411        rs28481613      G       T       .       PASS    AA=T;DP=117     GT:GQ:DP        0|1:100:24      0|0:68:28       0|0:100:42
+1      100719509       rs474064        C       A       .       PASS    AA=C;DP=126     GT:GQ:DP        0|1:100:24      0|0:69:26       0|0:100:75
+2      138577222       .       T       G       .       PASS    AA=T;DP=125     GT:GQ:DP        0|1:100:24      0|0:69:33       0|0:100:63
+16     52260047        .       T       C       .       PASS    AA=T;DP=100     GT:GQ:DP        0|1:100:24      0|0:71:22       0|0:100:54
+3      146372212       rs35901113      T       C       .       PASS    AA=T;DP=101     GT:GQ:DP        0|1:100:24      0|0:71:22       0|0:100:57
+1      193366923       rs2636332       A       G       .       PASS    AA=A;DP=104     GT:GQ:DP        0|1:100:24      0|0:71:22       0|0:100:58
+8      105327345       .       G       A       .       PASS    AA=G;DP=111     GT:GQ:DP        0|1:100:24      0|0:71:22       0|0:100:66
+3      81823255        rs17019195      T       C       .       PASS    AA=T;DP=114     GT:GQ:DP        0|1:100:24      0|0:71:22       0|0:100:68
+7      112138951       .       C       G       .       PASS    AA=C;DP=121     GT:GQ:DP        0|1:100:24      0|0:71:22       0|0:100:76
+8      135887066       .       C       A       .       PASS    AA=C;DP=122     GT:GQ:DP        0|1:100:24      0|0:71:22       0|0:100:76
+16     13595517        .       A       T       .       PASS    AA=A;DP=126     GT:GQ:DP        0|1:100:24      0|0:71:22       0|0:100:77
+4      26155765        rs11943592      C       T       .       PASS    AA=C;DP=87      GT:GQ:DP        0|1:100:24      0|0:71:22       0|0:87:29
+10     9983748 .       T       C       .       PASS    AA=T;DP=97      GT:GQ:DP        0|1:100:24      0|0:71:23       0|0:100:50
+3      163588809       rs4327404       C       T       .       PASS    AA=C;DP=99      GT:GQ:DP        0|1:100:24      0|0:71:23       0|0:100:53
+6      32795882        rs9275696       A       G       .       PASS    AA=a;DP=108     GT:GQ:DP        0|1:100:24      0|0:71:23       0|0:100:59
+4      128126819       rs28462102      A       G       .       PASS    AA=A;DP=116     GT:GQ:DP        0|1:100:24      0|0:71:23       0|0:72:24
+11     25096526        rs11028436      A       C       .       PASS    AA=A;DP=90      GT:GQ:DP        0|1:100:24      0|0:71:23       0|0:96:32
+11     97829885        .       C       G       .       PASS    AA=G;DP=119     GT:GQ:DP        0|1:100:24      0|0:71:24       0|0:100:70
+8      48649465        rs10107723      C       T       .       PASS    AA=c;DP=104     GT:GQ:DP        0|1:100:24      0|0:71:26       0|0:100:54
+1      57386925        .       C       T       .       PASS    AA=C;DP=131     GT:GQ:DP        0|1:100:24      0|0:74:23       0|0:100:38
+9      6237117 rs10975515      A       G       .       PASS    AA=A;DP=141     GT:GQ:DP        0|1:100:24      0|0:74:23       0|0:100:41
+7      124245595       rs1468378       C       A       .       PASS    AA=A;DP=98      GT:GQ:DP        0|1:100:24      0|0:74:23       0|0:100:52
+15     96281317        rs28629202      T       C       .       PASS    AA=T;DP=100     GT:GQ:DP        0|1:100:24      0|0:74:23       0|0:100:53
+6      65225396        .       C       T       .       PASS    AA=C;DP=104     GT:GQ:DP        0|1:100:24      0|0:74:23       0|0:100:57
+9      8522582 rs10977184      T       G       .       PASS    AA=T;DP=104     GT:GQ:DP        0|1:100:24      0|0:74:23       0|0:100:57
+11     58636427        .       T       C       .       PASS    AA=T;DP=107     GT:GQ:DP        0|1:100:24      0|0:74:23       0|0:100:58
+8      61144983        .       C       T       .       PASS    AA=.;DP=108     GT:GQ:DP        0|1:100:24      0|0:74:23       0|0:100:62
+5      178296653       .       A       G       .       PASS    AA=A;DP=108     GT:GQ:DP        0|1:100:24      0|0:74:23       0|0:100:63
+6      164310788       rs12207355      C       T       .       PASS    AA=T;DP=110     GT:GQ:DP        0|1:100:24      0|0:74:23       0|0:100:65
+5      77719290        rs12653089      C       T       .       PASS    AA=C;DP=116     GT:GQ:DP        0|1:100:24      0|0:74:23       0|0:100:67
+2      100708279       rs2309903       C       A       .       PASS    AA=A;DP=115     GT:GQ:DP        0|1:100:24      0|0:74:23       0|0:100:71
+1      194968096       rs10922108      A       T       .       PASS    AA=T;DP=89      GT:GQ:DP        0|1:100:24      0|0:74:23       0|0:90:30
+2      51360425        rs62140703      A       G       .       PASS    AA=A;DP=105     GT:GQ:DP        0|1:100:24      0|0:74:24       0|0:100:55
+7      14744433        rs1525094       T       G       .       PASS    AA=T;DP=118     GT:GQ:DP        0|1:100:24      0|0:74:24       0|0:100:71
+10     32961609        .       C       A       .       PASS    AA=c;DP=116     GT:GQ:DP        0|1:100:24      0|0:74:24       0|0:100:72
+2      4326718 rs17018995      C       G       .       PASS    AA=C;DP=132     GT:GQ:DP        0|1:100:24      0|0:74:24       0|0:100:78
+18     18666963        .       C       A       .       PASS    AA=A;DP=89      GT:GQ:DP        0|1:100:24      0|0:74:24       0|0:83:31
+1      106558429       rs12033873      C       G       .       PASS    AA=G;DP=96;HM2  GT:GQ:DP        0|1:100:24      0|0:74:26       0|0:100:45
+14     51496538        rs1253641       T       C       .       PASS    AA=T;DP=95      GT:GQ:DP        0|1:100:24      0|0:77:24       0|0:100:49
+5      24151156        .       A       G       .       PASS    AA=A;DP=139     GT:GQ:DP        0|1:100:24      0|0:77:24       0|0:100:50
+14     46127818        rs10137392      A       T       .       PASS    AA=T;DP=109     GT:GQ:DP        0|1:100:24      0|0:77:24       0|0:100:60
+7      51899205        .       C       T       .       PASS    AA=C;DP=116     GT:GQ:DP        0|1:100:24      0|0:77:24       0|0:100:68
+5      29729308        rs13176254      C       T       .       PASS    AA=T;DP=148     GT:GQ:DP        0|1:100:24      0|0:77:25       0|0:100:57
+10     98083818        rs2154183       T       C       .       PASS    AA=T;DP=121     GT:GQ:DP        0|1:100:24      0|0:77:25       0|0:100:61
+3      163736149       .       G       A       .       PASS    AA=G;DP=134     GT:GQ:DP        0|1:100:24      0|0:77:25       0|0:100:69
+9      118660538       rs1952225       G       A       .       PASS    AA=G;DP=125     GT:GQ:DP        0|1:100:24      0|0:77:25       0|0:100:79
+5      104905880       .       T       C       .       PASS    AA=T;DP=130     GT:GQ:DP        0|1:100:24      0|0:77:25       0|0:100:83
+2      40967426        .       T       G       .       PASS    AA=T;DP=103     GT:GQ:DP        0|1:100:24      0|0:77:26       0|0:100:55
+2      211863773       .       C       A       .       PASS    AA=C;DP=93      GT:GQ:DP        0|1:100:24      0|0:80:25       0|0:100:44
+3      193474548       .       C       G       .       PASS    AA=C;DP=111     GT:GQ:DP        0|1:100:24      0|0:80:25       0|0:100:55
+21     42799661        .       C       T       .       PASS    AA=C;DP=119     GT:GQ:DP        0|1:100:24      0|0:80:25       0|0:100:67
+12     96552968        .       G       C       .       PASS    AA=G;DP=135     GT:GQ:DP        0|1:100:24      0|0:80:25       0|0:100:76
+8      111005496       .       C       T       .       PASS    AA=C;DP=126     GT:GQ:DP        0|1:100:24      0|0:80:25       0|0:100:76
+12     129148812       .       A       G       .       PASS    AA=A;DP=129     GT:GQ:DP        0|1:100:24      0|0:80:25       0|0:100:77
+2      11493864        rs12611958      C       A       .       PASS    AA=C;DP=124     GT:GQ:DP        0|1:100:24      0|0:80:25       0|0:100:77
+12     69709207        rs35406667      G       A       .       PASS    AA=g;DP=136     GT:GQ:DP        0|1:100:24      0|0:80:25       0|0:100:86
+4      102628906       .       T       C       .       PASS    AA=C;DP=112     GT:GQ:DP        0|1:100:24      0|0:80:25       0|0:75:25
+5      130404835       .       A       T       .       PASS    AA=A;DP=97      GT:GQ:DP        0|1:100:24      0|0:80:26       0|0:100:44
+2      213648994       rs9288466       C       T       .       PASS    AA=C;DP=103     GT:GQ:DP        0|1:100:24      0|0:80:26       0|0:100:54
+14     24914979        .       A       T       .       PASS    AA=A;DP=116     GT:GQ:DP        0|1:100:24      0|0:80:26       0|0:100:67
+16     10736894        rs2697654       G       A       .       PASS    AA=N;DP=102     GT:GQ:DP        0|1:100:24      0|0:83:26       0|0:100:53
+1      229029141       rs6667483       A       G       .       PASS    AA=A;DP=154;HM2;HM3     GT:GQ:DP        0|1:100:24      0|0:83:26       0|0:100:58
+15     52444649        .       T       C       .       PASS    AA=T;DP=115     GT:GQ:DP        0|1:100:24      0|0:83:26       0|0:100:70
+1      64003619        rs2643236       C       T       .       PASS    AA=C;DP=120;HM2 GT:GQ:DP        0|1:100:24      0|0:83:26       0|0:100:71
+21     43104301        .       T       C       .       PASS    AA=C;DP=140     GT:GQ:DP        0|1:100:24      0|0:83:26       0|0:100:90
+10     21589500        rs10128510      T       C       .       PASS    AA=T;DP=118     GT:GQ:DP        0|1:100:24      0|0:83:27       0|0:100:67
+1      75360501        .       A       G       .       PASS    AA=A;DP=96      GT:GQ:DP        0|1:100:24      0|0:83:27       0|0:97:46
+2      225564966       rs16866414      C       T       .       PASS    AA=C;DP=112     GT:GQ:DP        0|1:100:24      0|0:86:27       0|0:100:63
+1      244500749       rs2185354       G       A       .       PASS    AA=g;DP=113     GT:GQ:DP        0|1:100:24      0|0:86:27       0|0:100:64
+11     121787772       rs550036        A       G       .       PASS    AA=G;DP=119     GT:GQ:DP        0|1:100:24      0|0:86:27       0|0:100:67
+1      78734173        rs1555541       T       C       .       PASS    AA=C;DP=114;HM2 GT:GQ:DP        0|1:100:24      0|0:86:27       0|0:100:68
+1      108131166       .       A       G       .       PASS    AA=A;DP=121     GT:GQ:DP        0|1:100:24      0|0:86:27       0|0:100:69
+4      111532500       rs1487256       G       C       .       PASS    AA=T;DP=122     GT:GQ:DP        0|1:100:24      0|0:86:27       0|0:100:71
+2      50204374        rs6752213       T       C       .       PASS    AA=T;DP=132     GT:GQ:DP        0|1:100:24      0|0:86:27       0|0:100:80
+12     53686264        .       T       C       .       PASS    AA=C;DP=134     GT:GQ:DP        0|1:100:24      0|0:86:27       0|0:100:83
+15     66812129        rs11072046      T       C       .       PASS    AA=T;DP=145     GT:GQ:DP        0|1:100:24      0|0:86:27       0|0:100:96
+8      20814364        rs7834534       G       A       .       PASS    AA=G;DP=118     GT:GQ:DP        0|1:100:24      0|0:86:30       0|0:100:67
+2      100670913       .       A       T       .       PASS    AA=A;DP=139     GT:GQ:DP        0|1:100:24      0|0:86:37       0|0:100:36
+4      87283994        .       T       G       .       PASS    AA=T;DP=95      GT:GQ:DP        0|1:100:24      0|0:89:28       0|0:100:44
+15     57457703        .       C       A       .       PASS    AA=C;DP=117     GT:GQ:DP        0|1:100:24      0|0:89:28       0|0:100:63
+2      213323703       .       T       G       .       PASS    AA=T;DP=119     GT:GQ:DP        0|1:100:24      0|0:89:28       0|0:100:69
+9      8303139 .       G       T       .       PASS    AA=T;DP=123     GT:GQ:DP        0|1:100:24      0|0:89:28       0|0:100:72
+5      91796   .       A       C       .       PASS    AA=.;DP=109     GT:GQ:DP        0|1:100:24      0|0:89:29       0|0:100:55
+2      74833331        rs3962014       C       T       .       PASS    AA=C;DP=128     GT:GQ:DP        0|1:100:24      0|0:89:29       0|0:100:72
+18     23416936        .       A       C       .       PASS    AA=A;DP=125     GT:GQ:DP        0|1:100:24      0|0:89:29       0|0:100:73
+5      23742093        rs10073647      C       A       .       PASS    AA=C;DP=140     GT:GQ:DP        0|1:100:24      0|0:89:29       0|0:100:87
+5      125118267       .       T       C       .       PASS    AA=T;DP=130     GT:GQ:DP        0|1:100:24      0|0:89:29       0|0:90:30
+3      121981206       .       C       T       .       PASS    AA=C;DP=139     GT:GQ:DP        0|1:100:24      0|0:89:29       0|0:99:34
+11     127052843       rs2322912       A       G       .       PASS    AA=G;DP=140     GT:GQ:DP        0|1:100:24      0|0:89:31       0|0:100:87
+5      70835265        rs9968768       C       G       .       PASS    AA=G;DP=129     GT:GQ:DP        0|1:100:24      0|0:92:29       0|0:100:75
+4      181058140       .       C       T       .       PASS    AA=C;DP=134     GT:GQ:DP        0|1:100:24      0|0:92:29       0|0:100:79
+2      77345910        .       A       C       .       PASS    AA=A;DP=132     GT:GQ:DP        0|1:100:24      0|0:92:29       0|0:100:80
+8      95179028        .       A       G       .       PASS    AA=A;DP=151     GT:GQ:DP        0|1:100:24      0|0:92:30       0|0:100:51
+14     41239179        rs12879030      A       G       .       PASS    AA=A;DP=116     GT:GQ:DP        0|1:100:24      0|0:92:30       0|0:100:61
+12     28631268        .       G       A       .       PASS    AA=G;DP=132     GT:GQ:DP        0|1:100:24      0|0:95:30       0|0:100:78
+8      16019962        rs1871575       A       G       .       PASS    AA=A;DP=121     GT:GQ:DP        0|1:100:24      0|0:95:31       0|0:100:51
+10     115056298       .       A       G       .       PASS    AA=A;DP=130     GT:GQ:DP        0|1:100:24      0|0:95:31       0|0:100:73
+14     100469474       rs11844547      A       C       .       PASS    AA=A;DP=153     GT:GQ:DP        0|1:100:24      0|0:95:32       0|0:100:58
+1      240471014       .       G       A       .       PASS    AA=G;DP=129     GT:GQ:DP        0|1:100:24      0|0:98:31       0|0:100:77
+1      161241196       rs16847621      G       A       .       PASS    AA=G;DP=132;HM2;HM3     GT:GQ:DP        0|1:100:24      0|0:98:31       0|0:100:79
+6      24469168        rs2792666       C       G       .       PASS    AA=C;DP=151     GT:GQ:DP        0|1:100:24      0|0:98:33       0|0:100:88
+10     117561691       rs4529823       G       A       .       PASS    AA=A;DP=69      GT:GQ:DP        0|1:100:24      0|1:100:15      0|0:63:23
+4      183454056       .       T       A       .       PASS    AA=T;DP=115     GT:GQ:DP        0|1:100:24      0|1:100:16      0|0:96:33
+4      5373355 rs56963964      C       G       .       PASS    AA=C;DP=102     GT:GQ:DP        0|1:100:24      0|1:100:17      0|0:100:57
+11     132930106       .       C       G       .       PASS    AA=G;DP=100     GT:GQ:DP        0|1:100:24      0|1:100:17      0|0:100:60
+4      172429716       .       T       C       .       PASS    AA=T;DP=104     GT:GQ:DP        0|1:100:24      0|1:100:17      0|0:100:63
+14     46908054        rs12883597      A       G       .       PASS    AA=A;DP=82      GT:GQ:DP        0|1:100:24      0|1:100:17      0|0:78:41
+10     27382785        rs10829170      T       C       .       PASS    AA=C;DP=104     GT:GQ:DP        0|1:100:24      0|1:100:18      0|0:100:62
+12     59585964        rs7973673       C       T       .       PASS    AA=C;DP=105     GT:GQ:DP        0|1:100:24      0|1:100:18      0|0:100:63
+5      75933653        rs10077289      C       T       .       PASS    AA=T;DP=102     GT:GQ:DP        0|1:100:24      0|1:100:19      0|0:100:60
+5      8579456 rs383026        A       G       .       PASS    AA=G;DP=108     GT:GQ:DP        0|1:100:24      0|1:100:19      0|0:100:71
+8      3972980 .       T       A       .       PASS    AA=T;DP=129     GT:GQ:DP        0|1:100:24      0|1:100:20      0|0:100:45
+9      122776861       rs2269067       G       C       .       PASS    AA=C;DP=131     GT:GQ:DP        0|1:100:24      0|1:100:20      0|0:100:86
+14     28777997        .       C       T       .       PASS    AA=C;DP=85      GT:GQ:DP        0|1:100:24      0|1:100:20      0|0:75:26
+10     68916478        rs7069964       C       T       .       PASS    AA=C;DP=95      GT:GQ:DP        0|1:100:24      0|1:100:21      0|0:100:50
+3      95714054        rs2171600       C       T       .       PASS    AA=C;DP=102     GT:GQ:DP        0|1:100:24      0|1:100:21      0|0:100:55
+14     77605812        .       G       A       .       PASS    AA=G;DP=152     GT:GQ:DP        0|1:100:24      0|1:100:22      0|0:100:103
+3      154417350       rs56263253      G       A       .       PASS    AA=g;DP=118     GT:GQ:DP        0|1:100:24      0|1:100:23      0|0:100:71
+2      187973201       rs7589584       A       T       .       PASS    AA=a;DP=70      GT:GQ:DP        0|1:100:24      0|1:100:23      0|0:57:20
+6      125904519       rs1389640       C       G       .       PASS    AA=C;DP=134     GT:GQ:DP        0|1:100:24      0|1:100:24      0|0:100:82
+8      16689526        rs6992112       T       A       .       PASS    AA=A;DP=131     GT:GQ:DP        0|1:100:24      0|1:100:24      0|0:100:86
+10     45122362        rs17157680      C       T       .       PASS    AA=C;DP=127     GT:GQ:DP        0|1:100:24      0|1:100:25      0|0:100:38
+4      176921187       rs2581771       C       A       .       PASS    AA=A;DP=86      GT:GQ:DP        0|1:100:24      0|1:100:25      0|0:100:38
+16     78578279        .       C       T       .       PASS    AA=C;DP=112     GT:GQ:DP        0|1:100:24      0|1:100:25      0|0:100:63
+8      107342114       rs3019299       C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        0|1:100:24      0|1:100:25      0|0:100:70
+1      223766793       rs60703299      A       G       .       PASS    AA=A;DP=117     GT:GQ:DP        0|1:100:24      0|1:100:26      0|0:100:64
+10     58559774        rs1875773       G       C       .       PASS    AA=C;DP=130     GT:GQ:DP        0|1:100:24      0|1:100:26      0|0:100:81
+20     18477107        rs6136406       G       C       .       PASS    AA=G;DP=128     GT:GQ:DP        0|1:100:24      0|1:100:27      0|0:100:36
+3      114327504       rs4387939       C       G       .       PASS    AA=G;DP=157     GT:GQ:DP        0|1:100:24      0|1:100:28      0|0:100:42
+9      89904185        rs11142101      G       A       .       PASS    AA=G;DP=109     GT:GQ:DP        0|1:100:24      0|1:100:28      0|0:100:56
+1      168884003       rs619699        G       A       .       PASS    AA=G;DP=114;HM2 GT:GQ:DP        0|1:100:24      0|1:100:28      0|0:100:63
+13     104591311       rs3015369       G       C       .       PASS    AA=C;DP=127     GT:GQ:DP        0|1:100:24      0|1:100:28      0|0:100:75
+5      146256345       rs319174        A       G       .       PASS    AA=A;DP=139     GT:GQ:DP        0|1:100:24      0|1:100:28      0|0:100:88
+6      162084725       rs3019450       G       A       .       PASS    AA=A;DP=108     GT:GQ:DP        0|1:100:24      0|1:100:29      0|0:100:56
+16     11027154        rs8045749       A       G       .       PASS    AA=G;DP=129     GT:GQ:DP        0|1:100:24      0|1:100:29      0|0:100:77
+21     41120024        rs9975158       A       G       .       PASS    AA=A;DP=139     GT:GQ:DP        0|1:100:24      0|1:100:29      0|0:100:85
+2      180085545       rs9288039       G       A       .       PASS    AA=A;DP=119     GT:GQ:DP        0|1:100:24      0|1:100:30      0|0:100:66
+8      6257557 rs2440443       G       A       .       PASS    AA=G;DP=148     GT:GQ:DP        0|1:100:24      0|1:100:39      0|0:100:87
+3      19963441        rs11128927      G       C       .       PASS    AA=G;DP=104     GT:GQ:DP        0|1:100:24      0|1:25:10       0|0:100:70
+18     43833032        rs7243697       A       G       .       PASS    AA=G;DP=108     GT:GQ:DP        0|1:100:24      0|1:30:22       0|0:100:62
+6      28356573        rs1778477       A       T       .       PASS    AA=T;DP=117     GT:GQ:DP        0|1:100:24      0|1:33:17       0|0:100:77
+22     35972890        rs6000628       T       C       .       PASS    AA=C;DP=121     GT:GQ:DP        0|1:100:24      0|1:39:14       0|0:100:35
+9      1038402 rs2279985       G       A       .       PASS    AA=G;DP=92      GT:GQ:DP        0|1:100:24      0|1:47:13       0|0:100:56
+12     39471297        rs10879190      A       G       .       PASS    AA=G;DP=121     GT:GQ:DP        0|1:100:24      0|1:47:31       0|0:100:65
+6      130626334       rs9492513       C       T       .       PASS    AA=c;DP=103     GT:GQ:DP        0|1:100:24      0|1:52:18       0|0:100:60
+15     96156704        rs8023811       G       A       .       PASS    AA=A;DP=120     GT:GQ:DP        0|1:100:24      0|1:60:16       0|0:96:33
+7      126416116       rs1419438       T       C       .       PASS    AA=T;DP=112     GT:GQ:DP        0|1:100:24      0|1:64:31       0|0:100:48
+1      188046561       rs6680383       G       A       .       PASS    AA=A;DP=94      GT:GQ:DP        0|1:100:24      0|1:66:20       0|0:100:43
+9      1488019 rs7019100       T       C       .       PASS    AA=T;DP=86      GT:GQ:DP        0|1:100:24      0|1:66:21       0|0:100:38
+10     53289153        rs7096733       A       G       .       PASS    AA=A;DP=87      GT:GQ:DP        0|1:100:24      0|1:68:12       0|0:100:51
+14     41362422        rs1241774       T       A       .       PASS    AA=C;DP=66      GT:GQ:DP        0|1:100:24      0|1:68:14       0|0:54:19
+1      203636353       rs1857509       C       T       .       PASS    AA=N;DP=121     GT:GQ:DP        0|1:100:24      0|1:69:19       0|0:100:73
+8      116134009       .       A       G       .       PASS    AA=A;DP=98      GT:GQ:DP        0|1:100:24      0|1:6:9 0|0:100:63
+8      130112690       rs4385435       T       C       .       PASS    AA=C;DP=76      GT:GQ:DP        0|1:100:24      0|1:70:14       0|0:87:31
+7      129242347       rs2693729       C       G       .       PASS    AA=G;DP=88      GT:GQ:DP        0|1:100:24      0|1:80:22       0|0:87:30
+10     25750066        rs947490        G       A       .       PASS    AA=g;DP=105     GT:GQ:DP        0|1:100:24      0|1:84:15       0|0:100:72
+16     52532942        rs10521302      G       A       .       PASS    AA=A;DP=98      GT:GQ:DP        0|1:100:24      0|1:85:11       0|0:100:65
+4      165902648       rs17045449      C       T       .       PASS    AA=.;DP=112     GT:GQ:DP        0|1:100:24      0|1:85:12       0|0:100:75
+5      106039958       .       C       T       .       PASS    AA=C;DP=101     GT:GQ:DP        0|1:100:24      0|1:85:20       0|0:100:58
+6      162119448       rs12200225      C       A       .       PASS    AA=C;DP=115     GT:GQ:DP        0|1:100:24      0|1:94:23       0|0:100:73
+9      6942127 rs6477132       G       T       .       PASS    AA=T;DP=88      GT:GQ:DP        0|1:100:24      1|1:16:17       0|1:100:48
+2      231834778       rs13415839      C       T       .       PASS    AA=T;DP=106     GT:GQ:DP        0|1:100:24      1|1:18:13       0|1:100:69
+4      160897020       rs9995111       A       G       .       PASS    AA=A;DP=98      GT:GQ:DP        0|1:100:24      1|1:22:14       0|1:100:58
+9      91240449        rs11265891      C       T       .       PASS    AA=C;DP=74      GT:GQ:DP        0|1:100:24      1|1:24:11       0|1:100:27
+15     57365139        rs7182627       T       C       .       PASS    AA=C;DP=88      GT:GQ:DP        0|1:100:24      1|1:24:9        0|1:100:54
+3      77601560        rs13072039      T       C       .       PASS    AA=C;DP=104     GT:GQ:DP        0|1:100:24      1|1:26:14       0|1:100:55
+5      20157302        rs4866045       T       A       .       PASS    AA=A;DP=80      GT:GQ:DP        0|1:100:24      1|1:27:20       0|1:100:28
+11     120634738       rs9943623       C       A       .       PASS    AA=a;DP=81      GT:GQ:DP        0|1:100:24      1|1:30:11       0|1:100:45
+4      136185613       rs4645267       G       A       .       PASS    AA=G;DP=94      GT:GQ:DP        0|1:100:24      1|1:30:11       0|1:100:49
+19     50364073        .       A       G       .       PASS    AA=G;DP=105     GT:GQ:DP        0|1:100:24      1|1:30:11       0|1:100:71
+1      97459603        rs1413239       C       T       .       PASS    AA=T;DP=89      GT:GQ:DP        0|1:100:24      1|1:30:17       0|1:100:48
+2      633469  rs7560246       T       C       .       PASS    AA=C;DP=97      GT:GQ:DP        0|1:100:24      1|1:33:12       0|1:100:60
+2      186138306       rs4257362       G       A       .       PASS    AA=A;DP=93      GT:GQ:DP        0|1:100:24      1|1:33:27       0|1:100:41
+1      226782546       rs10916338      G       A       .       PASS    AA=a;DP=105;HM2;HM3     GT:GQ:DP        0|1:100:24      1|1:36:14       0|1:100:67
+12     3120524 rs673450        A       G       .       PASS    AA=G;DP=98      GT:GQ:DP        0|1:100:24      1|1:39:14       0|1:100:49
+12     51621483        rs12302939      C       G       .       PASS    AA=c;DP=99      GT:GQ:DP        0|1:100:24      1|1:39:14       0|1:100:50
+16     6900282 rs9924891       G       A       .       PASS    AA=A;DP=119     GT:GQ:DP        0|1:100:24      1|1:40:19       0|1:100:79
+4      27099677        rs10461104      G       A       .       PASS    AA=A;DP=107     GT:GQ:DP        0|1:100:24      1|1:41:23       0|1:100:64
+9      81277856        rs7030540       T       C       .       PASS    AA=C;DP=115     GT:GQ:DP        0|1:100:24      1|1:42:16       0|1:100:76
+2      207321746       rs56012632      A       T       .       PASS    AA=A;DP=125     GT:GQ:DP        0|1:100:24      1|1:42:25       0|1:100:78
+10     116274352       rs2475241       C       A       .       PASS    AA=C;DP=90      GT:GQ:DP        0|1:100:24      1|1:45:16       0|1:100:50
+19     16886292        rs706761        G       A       .       PASS    AA=G;DP=98      GT:GQ:DP        0|1:100:24      1|1:45:16       0|1:100:58
+12     28112656        rs11049318      G       A       .       PASS    AA=G;DP=88      GT:GQ:DP        0|1:100:24      1|1:45:17       0|1:100:46
+19     4490081 rs7254884       A       G       .       PASS    AA=A;DP=110     GT:GQ:DP        0|1:100:24      1|1:45:18       0|1:100:68
+2      16153947        rs28658014      C       T       .       PASS    AA=T;DP=103     GT:GQ:DP        0|1:100:24      1|1:48:17       0|1:100:61
+3      130579025       rs6439178       A       G       .       PASS    AA=A;DP=89      GT:GQ:DP        0|1:100:24      1|1:48:18       0|1:100:46
+1      86905943        rs12565667      C       A       .       PASS    AA=A;DP=108     GT:GQ:DP        0|1:100:24      1|1:48:18       0|1:100:67
+20     4309789 rs3842841       C       T       .       PASS    AA=T;DP=87      GT:GQ:DP        0|1:100:24      1|1:48:19       0|1:100:45
+2      122735016       rs6752774       C       T       .       PASS    AA=C;DP=122     GT:GQ:DP        0|1:100:24      1|1:48:19       0|1:100:80
+10     8264856 rs521331        T       C       .       PASS    AA=C;DP=118     GT:GQ:DP        0|1:100:24      1|1:48:23       0|1:100:73
+8      139316209       rs6577898       C       A       .       PASS    AA=C;DP=104     GT:GQ:DP        0|1:100:24      1|1:51:18       0|1:100:60
+2      6021231 rs59968059      A       G       .       PASS    AA=A;DP=104     GT:GQ:DP        0|1:100:24      1|1:54:19       0|1:100:59
+18     61639799        rs4940654       A       T       .       PASS    AA=T;DP=115     GT:GQ:DP        0|1:100:24      1|1:54:19       0|1:100:70
+16     80778823        rs9938830       C       A       .       PASS    AA=C;DP=101     GT:GQ:DP        0|1:100:24      1|1:57:20       0|1:100:58
+6      13002844        rs2095122       C       T       .       PASS    AA=T;DP=107     GT:GQ:DP        0|1:100:24      1|1:57:21       0|1:100:63
+19     6886863 rs252559        A       G       .       PASS    AA=A;DP=107     GT:GQ:DP        0|1:100:24      1|1:57:21       0|1:100:64
+8      92752703        rs10102404      C       G       .       PASS    AA=c;DP=108     GT:GQ:DP        0|1:100:24      1|1:57:21       0|1:100:65
+20     43581886        rs62205589      T       G       .       PASS    AA=T;DP=104     GT:GQ:DP        0|1:100:24      1|1:60:21       0|1:100:58
+12     70675469        rs4760755       T       C       .       PASS    AA=T;DP=121     GT:GQ:DP        0|1:100:24      1|1:60:21       0|1:100:76
+17     50970752        rs4534914       G       T       .       PASS    AA=T;DP=86      GT:GQ:DP        0|1:100:24      1|1:60:22       0|1:100:41
+4      104899836       rs233970        G       A       .       PASS    AA=A;DP=92      GT:GQ:DP        0|1:100:24      1|1:63:22       0|1:100:47
+15     51171087        rs335495        G       T       .       PASS    AA=T;DP=96      GT:GQ:DP        0|1:100:24      1|1:63:22       0|1:100:53
+8      86041876        rs1949827       G       T       .       PASS    AA=G;DP=101     GT:GQ:DP        0|1:100:24      1|1:63:22       0|1:100:56
+1      216450088       rs4359084       A       C       .       PASS    AA=C;DP=119     GT:GQ:DP        0|1:100:24      1|1:63:22       0|1:100:76
+9      70648240        rs10511962      A       G       .       PASS    AA=A;DP=142     GT:GQ:DP        0|1:100:24      1|1:63:23       0|1:100:52
+8      14306501        rs4831585       A       C       .       PASS    AA=c;DP=105     GT:GQ:DP        0|1:100:24      1|1:63:23       0|1:100:62
+2      209781308       rs12053454      T       C       .       PASS    AA=T;DP=116     GT:GQ:DP        0|1:100:24      1|1:63:24       0|1:100:67
+10     20872653        rs11498354      C       T       .       PASS    AA=C;DP=117     GT:GQ:DP        0|1:100:24      1|1:66:23       0|1:100:75
+7      38041381        rs11983867      G       A       .       PASS    AA=G;DP=121     GT:GQ:DP        0|1:100:24      1|1:69:24       0|1:100:70
+7      1562722 rs7811444       A       G       .       PASS    AA=G;DP=124     GT:GQ:DP        0|1:100:24      1|1:69:24       0|1:100:77
+12     13463020        rs7968650       A       T       .       PASS    AA=a;DP=132     GT:GQ:DP        0|1:100:24      1|1:72:25       0|1:100:78
+6      115135507       rs4946016       G       C       .       PASS    AA=C;DP=125     GT:GQ:DP        0|1:100:24      1|1:72:26       0|1:100:71
+20     19632156        rs2145170       A       G       .       PASS    AA=G;DP=119     GT:GQ:DP        0|1:100:24      1|1:72:27       0|1:100:71
+15     99852790        rs2047222       T       C       .       PASS    AA=C;DP=124     GT:GQ:DP        0|1:100:24      1|1:72:28       0|1:100:73
+3      178154799       rs936701        C       T       .       PASS    AA=T;DP=114     GT:GQ:DP        0|1:100:24      1|1:75:26       0|1:100:64
+8      115100423       rs28646078      T       G       .       PASS    AA=G;DP=119     GT:GQ:DP        0|1:100:24      1|1:75:26       0|1:100:64
+3      68495977        rs262226        G       A       .       PASS    AA=G;DP=137     GT:GQ:DP        0|1:100:24      1|1:75:27       0|1:100:70
+7      124839418       rs6945564       T       C       .       PASS    AA=C;DP=106     GT:GQ:DP        0|1:100:24      1|1:78:28       0|1:100:55
+1      5595455 rs697707        T       A       .       PASS    AA=A;DP=98      GT:GQ:DP        0|1:100:24      1|1:7:13        0|1:100:59
+9      124209751       rs10818684      C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        0|1:100:24      1|1:87:30       0|1:100:56
+5      158346883       rs1544754       T       C       .       PASS    AA=C;DP=133     GT:GQ:DP        0|1:100:24      1|1:87:30       0|1:100:80
+4      41540730        rs6447116       T       G       .       PASS    AA=G;DP=115     GT:GQ:DP        0|1:100:24      1|1:8:22        0|1:100:68
+1      51765451        .       C       A       .       PASS    AA=C;DP=141     GT:GQ:DP        0|1:100:25      0|0:100:32      0|0:100:44
+14     56030161        rs57246112      T       C       .       PASS    AA=T;DP=145     GT:GQ:DP        0|1:100:25      0|0:100:32      0|0:100:48
+12     65339653        .       T       C       .       PASS    AA=T;DP=120     GT:GQ:DP        0|1:100:25      0|0:100:32      0|0:100:65
+16     74766681        rs8051416       A       G       .       PASS    AA=G;DP=129     GT:GQ:DP        0|1:100:25      0|0:100:33      0|0:100:71
+2      213078079       rs6755764       T       G       .       PASS    AA=T;DP=132     GT:GQ:DP        0|1:100:25      0|0:100:33      0|0:100:76
+2      195978335       rs16840243      A       G       .       PASS    AA=A;DP=140     GT:GQ:DP        0|1:100:25      0|0:100:33      0|0:100:84
+2      237823127       rs28692760      A       G       .       PASS    AA=A;DP=150     GT:GQ:DP        0|1:100:25      0|0:100:34      0|0:94:40
+9      79227842        rs2148884       T       A       .       PASS    AA=T;DP=154     GT:GQ:DP        0|1:100:25      0|0:100:36      0|0:100:97
+11     87022754        .       G       T       .       PASS    AA=G;DP=161     GT:GQ:DP        0|1:100:25      0|0:100:36      0|0:88:41
+7      54115017        rs7787727       T       G       .       PASS    AA=G;DP=118     GT:GQ:DP        0|1:100:25      0|0:11:10       0|0:100:71
+4      125458444       .       C       T       .       PASS    AA=C;DP=81      GT:GQ:DP        0|1:100:25      0|0:19:14       0|0:90:30
+7      35260653        .       G       T       .       PASS    AA=G;DP=115     GT:GQ:DP        0|1:100:25      0|0:21:13       0|0:87:35
+7      13708851        rs10486079      G       T       .       PASS    AA=G;DP=90      GT:GQ:DP        0|1:100:25      0|0:21:16       0|0:100:49
+5      150807269       rs62377526      A       G       .       PASS    AA=A;DP=83      GT:GQ:DP        0|1:100:25      0|0:22:11       0|0:79:38
+7      101177955       .       C       T       .       PASS    AA=C;DP=99      GT:GQ:DP        0|1:100:25      0|0:29:9        0|0:100:59
+6      93632732        .       G       C       .       PASS    AA=G;DP=107     GT:GQ:DP        0|1:100:25      0|0:32:10       0|0:100:72
+7      36114739        .       T       C       .       PASS    AA=T;DP=99      GT:GQ:DP        0|1:100:25      0|0:32:14       0|0:100:61
+1      161102859       rs6665690       A       C       .       PASS    AA=A;DP=101     GT:GQ:DP        0|1:100:25      0|0:32:20       0|0:100:56
+11     130844309       rs12419035      C       T       .       PASS    AA=C;DP=107     GT:GQ:DP        0|1:100:25      0|0:35:10       0|0:100:72
+2      71528915        rs10187558      G       T       .       PASS    AA=G;DP=110     GT:GQ:DP        0|1:100:25      0|0:35:21       0|0:100:53
+2      1148869 .       C       T       .       PASS    AA=C;DP=105     GT:GQ:DP        0|1:100:25      0|0:36:15       0|0:100:64
+7      131629659       rs28680174      A       G       .       PASS    AA=-;DP=97      GT:GQ:DP        0|1:100:25      0|0:37:14       0|0:100:57
+7      85980272        rs7782602       G       A       .       PASS    AA=G;DP=98      GT:GQ:DP        0|1:100:25      0|0:38:11       0|0:100:65
+22     47650120        .       C       A       .       PASS    AA=A;DP=113     GT:GQ:DP        0|1:100:25      0|0:38:11       0|0:100:76
+1      35029671        rs4652861       G       A       .       PASS    AA=G;DP=91      GT:GQ:DP        0|1:100:25      0|0:38:12       0|0:100:42
+17     71984593        rs61742551      G       A       .       PASS    AA=G;DP=94      GT:GQ:DP        0|1:100:25      0|0:38:12       0|0:100:56
+4      69884972        .       A       T       .       PASS    AA=A;DP=103     GT:GQ:DP        0|1:100:25      0|0:38:22       0|0:100:55
+10     31040432        rs16931849      G       A       .       PASS    AA=G;DP=132     GT:GQ:DP        0|1:100:25      0|0:38:22       0|0:100:85
+4      73543822        .       T       G       .       PASS    AA=T;DP=104     GT:GQ:DP        0|1:100:25      0|0:39:22       0|0:100:55
+7      109466924       rs10271187      C       T       .       PASS    AA=C;DP=111     GT:GQ:DP        0|1:100:25      0|0:40:20       0|0:100:66
+7      139787360       .       G       A       .       PASS    AA=g;DP=91      GT:GQ:DP        0|1:100:25      0|0:41:12       0|0:100:43
+5      105079093       rs4314380       G       A       .       PASS    AA=-;DP=87      GT:GQ:DP        0|1:100:25      0|0:41:12       0|0:100:51
+15     34031906        .       G       A       .       PASS    AA=G;DP=96      GT:GQ:DP        0|1:100:25      0|0:41:12       0|0:100:61
+3      13117274        rs884466        T       C       .       PASS    AA=T;DP=128     GT:GQ:DP        0|1:100:25      0|0:41:13       0|0:100:43
+3      35257422        .       C       T       .       PASS    AA=C;DP=87      GT:GQ:DP        0|1:100:25      0|0:41:13       0|0:100:48
+18     1628645 .       C       T       .       PASS    AA=C;DP=106     GT:GQ:DP        0|1:100:25      0|0:41:13       0|0:100:67
+14     103803078       rs10135432      C       T       .       PASS    AA=C;DP=116     GT:GQ:DP        0|1:100:25      0|0:41:15       0|0:100:74
+3      84445104        .       T       C       .       PASS    AA=T;DP=109     GT:GQ:DP        0|1:100:25      0|0:41:18       0|0:100:63
+3      41108425        rs367027        A       G       .       PASS    AA=A;DP=124     GT:GQ:DP        0|1:100:25      0|0:41:19       0|0:100:79
+3      28195271        .       G       T       .       PASS    AA=G;DP=114     GT:GQ:DP        0|1:100:25      0|0:41:23       0|0:100:61
+3      96142145        .       G       C       .       PASS    AA=G;DP=84      GT:GQ:DP        0|1:100:25      0|0:42:21       0|0:100:39
+2      233460795       rs2250660       G       C       .       PASS    AA=-;DP=112     GT:GQ:DP        0|1:100:25      0|0:43:18       0|0:100:65
+11     39841387        rs11035541      A       T       .       PASS    AA=A;DP=92      GT:GQ:DP        0|1:100:25      0|0:43:24       0|0:100:44
+19     335517  rs59372439      C       T       .       PASS    AA=-;DP=89      GT:GQ:DP        0|1:100:25      0|0:44:13       0|0:100:38
+1      167987205       .       A       C       .       PASS    AA=A;DP=82      GT:GQ:DP        0|1:100:25      0|0:44:13       0|0:100:44
+12     58231664        rs35389903      T       C       .       PASS    AA=t;DP=86      GT:GQ:DP        0|1:100:25      0|0:44:13       0|0:100:48
+8      73860180        rs2251233       C       T       .       PASS    AA=C;DP=98      GT:GQ:DP        0|1:100:25      0|0:44:13       0|0:100:53
+7      5532809 .       C       A       .       PASS    AA=c;DP=98      GT:GQ:DP        0|1:100:25      0|0:44:13       0|0:100:59
+2      217346187       rs7599100       G       C       .       PASS    AA=G;DP=108     GT:GQ:DP        0|1:100:25      0|0:44:13       0|0:100:72
+3      41423086        rs7356088       A       T       .       PASS    AA=A;DP=115     GT:GQ:DP        0|1:100:25      0|0:44:13       0|0:100:76
+9      87706843        .       A       G       .       PASS    AA=A;DP=64      GT:GQ:DP        0|1:100:25      0|0:44:13       0|0:40:19
+10     59432695        rs7918006       C       G       .       PASS    AA=C;DP=79      GT:GQ:DP        0|1:100:25      0|0:44:13       0|0:90:31
+6      102480029       .       T       C       .       PASS    AA=T;DP=81      GT:GQ:DP        0|1:100:25      0|0:44:14       0|0:100:42
+14     55050224        rs10130266      C       G       .       PASS    AA=G;DP=118     GT:GQ:DP        0|1:100:25      0|0:44:14       0|0:100:78
+3      95853054        .       G       A       .       PASS    AA=A;DP=98      GT:GQ:DP        0|1:100:25      0|0:44:15       0|0:100:58
+5      172903828       .       G       A       .       PASS    AA=G;DP=115     GT:GQ:DP        0|1:100:25      0|0:44:15       0|0:100:75
+19     9770412 .       G       T       .       PASS    AA=.;DP=106     GT:GQ:DP        0|1:100:25      0|0:45:19       0|0:100:62
+21     42406050        rs220136        A       C       .       PASS    AA=A;DP=164     GT:GQ:DP        0|1:100:25      0|0:46:25       0|0:100:60
+8      137071529       .       C       G       .       PASS    AA=C;DP=114     GT:GQ:DP        0|1:100:25      0|0:47:14       0|0:100:73
+8      21655717        rs4427162       C       T       .       PASS    AA=t;DP=89      GT:GQ:DP        0|1:100:25      0|0:47:15       0|0:100:49
+6      66223960        rs58655702      G       A       .       PASS    AA=G;DP=109     GT:GQ:DP        0|1:100:25      0|0:47:17       0|0:100:69
+5      23005148        .       C       A       .       PASS    AA=C;DP=105     GT:GQ:DP        0|1:100:25      0|0:48:20       0|0:100:61
+2      166314046       rs2303393       A       G       .       PASS    AA=a;DP=90      GT:GQ:DP        0|1:100:25      0|0:49:21       0|0:100:45
+16     62611119        .       T       C       .       PASS    AA=T;DP=126     GT:GQ:DP        0|1:100:25      0|0:49:26       0|0:100:74
+16     21860667        .       G       A       .       PASS    AA=G;DP=131     GT:GQ:DP        0|1:100:25      0|0:49:26       0|0:100:79
+18     65633397        rs7236337       G       A       .       PASS    AA=G;DP=114     GT:GQ:DP        0|1:100:25      0|0:50:15       0|0:100:76
+7      55072009        .       C       T       .       PASS    AA=C;DP=117     GT:GQ:DP        0|1:100:25      0|0:50:15       0|0:100:77
+5      6360372 .       T       C       .       PASS    AA=T;DP=122     GT:GQ:DP        0|1:100:25      0|0:50:15       0|0:100:79
+9      123830410       rs12002544      A       G       .       PASS    AA=A;DP=124     GT:GQ:DP        0|1:100:25      0|0:50:15       0|0:100:85
+4      135966454       .       G       A       .       PASS    AA=g;DP=67      GT:GQ:DP        0|1:100:25      0|0:50:15       0|0:66:22
+1      55783503        rs1006806       A       G       .       PASS    AA=A;DP=113     GT:GQ:DP        0|1:100:25      0|0:50:15       0|0:93:31
+4      114617911       .       T       A       .       PASS    AA=T;DP=117     GT:GQ:DP        0|1:100:25      0|0:50:16       0|0:100:74
+13     60386187        .       G       A       .       PASS    AA=G;DP=129     GT:GQ:DP        0|1:100:25      0|0:50:17       0|0:100:41
+16     3361383 .       G       A       .       PASS    AA=g;DP=96      GT:GQ:DP        0|1:100:25      0|0:50:17       0|0:100:55
+1      76548729        .       C       T       .       PASS    AA=c;DP=128     GT:GQ:DP        0|1:100:25      0|0:50:17       0|0:100:78
+2      194992999       .       G       A       .       PASS    AA=A;DP=119     GT:GQ:DP        0|1:100:25      0|0:50:18       0|0:100:57
+4      54706526        rs1364989       T       C       .       PASS    AA=T;DP=108     GT:GQ:DP        0|1:100:25      0|0:50:25       0|0:100:56
+3      59391087        rs9826885       A       G       .       PASS    AA=G;DP=91      GT:GQ:DP        0|1:100:25      0|0:51:20       0|0:100:45
+12     33807503        rs1906140       G       A       .       PASS    AA=A;DP=99      GT:GQ:DP        0|1:100:25      0|0:51:20       0|0:100:56
+11     134276553       .       G       T       .       PASS    AA=g;DP=122     GT:GQ:DP        0|1:100:25      0|0:51:21       0|0:100:73
+3      23130169        rs4858477       G       C       .       PASS    AA=G;DP=129     GT:GQ:DP        0|1:100:25      0|0:51:21       0|0:100:84
+6      118323786       rs6939630       C       A       .       PASS    AA=C;DP=150     GT:GQ:DP        0|1:100:25      0|0:52:27       0|0:100:53
+3      61105867        rs9812158       A       G       .       PASS    AA=G;DP=137     GT:GQ:DP        0|1:100:25      0|0:52:27       0|0:100:69
+7      87642456        .       C       A       .       PASS    AA=C;DP=130     GT:GQ:DP        0|1:100:25      0|0:52:27       0|0:100:77
+1      31499579        rs28429260      T       A       .       PASS    AA=T;DP=97      GT:GQ:DP        0|1:100:25      0|0:53:16       0|0:100:55
+1      78198872        rs2296454       T       C       .       PASS    AA=C;DP=96;HM3  GT:GQ:DP        0|1:100:25      0|0:53:16       0|0:100:58
+17     52937497        rs12103682      G       T       .       PASS    AA=G;DP=105     GT:GQ:DP        0|1:100:25      0|0:53:16       0|0:100:63
+10     89325482        .       A       C       .       PASS    AA=A;DP=115     GT:GQ:DP        0|1:100:25      0|0:53:16       0|0:100:74
+2      17840733        .       A       G       .       PASS    AA=A;DP=77      GT:GQ:DP        0|1:100:25      0|0:53:16       0|0:66:28
+13     89512745        .       G       C       .       PASS    AA=G;DP=91      GT:GQ:DP        0|1:100:25      0|0:53:17       0|0:100:49
+18     26456870        rs9961046       C       T       .       PASS    AA=C;DP=111     GT:GQ:DP        0|1:100:25      0|0:53:17       0|0:100:59
+1      19373077        .       A       G       .       PASS    AA=A;DP=120     GT:GQ:DP        0|1:100:25      0|0:53:17       0|0:71:35
+8      74652927        .       A       T       .       PASS    AA=a;DP=75      GT:GQ:DP        0|1:100:25      0|0:53:17       0|0:81:27
+16     75340180        .       C       G       .       PASS    AA=C;DP=97      GT:GQ:DP        0|1:100:25      0|0:53:18       0|0:100:55
+14     27576333        .       G       A       .       PASS    AA=G;DP=95      GT:GQ:DP        0|1:100:25      0|0:54:21       0|0:100:48
+14     90042022        rs17126833      G       C       .       PASS    AA=N;DP=137     GT:GQ:DP        0|1:100:25      0|0:55:24       0|0:100:39
+9      126923281       rs7019288       G       A       .       PASS    AA=G;DP=124     GT:GQ:DP        0|1:100:25      0|0:56:17       0|0:100:43
+6      55643310        rs6459097       C       G       .       PASS    AA=C;DP=89      GT:GQ:DP        0|1:100:25      0|0:56:17       0|0:100:44
+3      1317567 rs9882587       G       T       .       PASS    AA=G;DP=98      GT:GQ:DP        0|1:100:25      0|0:56:17       0|0:100:57
+7      47250508        .       G       A       .       PASS    AA=G;DP=102     GT:GQ:DP        0|1:100:25      0|0:56:17       0|0:100:57
+2      193477564       rs7583287       C       T       .       PASS    AA=C;DP=103     GT:GQ:DP        0|1:100:25      0|0:56:17       0|0:100:62
+6      129176184       .       A       G       .       PASS    AA=G;DP=101     GT:GQ:DP        0|1:100:25      0|0:56:17       0|0:100:62
+19     7416437 rs7254770       T       C       .       PASS    AA=C;DP=115     GT:GQ:DP        0|1:100:25      0|0:56:17       0|0:100:71
+11     69094166        rs12295936      C       A       .       PASS    AA=C;DP=117     GT:GQ:DP        0|1:100:25      0|0:56:17       0|0:100:75
+15     64164306        .       C       T       .       PASS    AA=C;DP=118     GT:GQ:DP        0|1:100:25      0|0:56:17       0|0:100:77
+22     49285895        rs134977        A       G       .       PASS    AA=A;DP=122     GT:GQ:DP        0|1:100:25      0|0:56:17       0|0:100:80
+2      104272489       rs13423969      C       T       .       PASS    AA=c;DP=92      GT:GQ:DP        0|1:100:25      0|0:56:18       0|0:100:46
+13     80798840        .       C       T       .       PASS    AA=C;DP=89      GT:GQ:DP        0|1:100:25      0|0:56:18       0|0:100:47
+20     38978159        rs62209381      G       A       .       PASS    AA=T;DP=99      GT:GQ:DP        0|1:100:25      0|0:56:18       0|0:100:57
+15     49649010        rs9806669       T       C       .       PASS    AA=T;DP=114     GT:GQ:DP        0|1:100:25      0|0:56:18       0|0:100:70
+17     34329284        rs11539845      G       A       .       PASS    AA=G;DP=113     GT:GQ:DP        0|1:100:25      0|0:56:19       0|0:100:69
+18     6568875 .       G       A       .       PASS    AA=G;DP=117     GT:GQ:DP        0|1:100:25      0|0:56:19       0|0:100:77
+10     132887308       rs2918138       C       T       .       PASS    AA=C;DP=99      GT:GQ:DP        0|1:100:25      0|0:59:18       0|0:100:57
+4      30041595        rs7672498       T       G       .       PASS    AA=T;DP=102     GT:GQ:DP        0|1:100:25      0|0:59:18       0|0:100:60
+8      8768648 .       G       C       .       PASS    AA=G;DP=106     GT:GQ:DP        0|1:100:25      0|0:59:18       0|0:100:62
+4      113958922       rs17044999      G       A       .       PASS    AA=G;DP=109     GT:GQ:DP        0|1:100:25      0|0:59:18       0|0:100:67
+1      227983601       rs12061481      G       T       .       PASS    AA=G;DP=115     GT:GQ:DP        0|1:100:25      0|0:59:18       0|0:100:70
+7      145600494       rs10265768      A       G       .       PASS    AA=A;DP=120     GT:GQ:DP        0|1:100:25      0|0:59:18       0|0:100:77
+2      212550705       .       C       G       .       PASS    AA=C;DP=80      GT:GQ:DP        0|1:100:25      0|0:59:18       0|0:81:28
+5      73622941        rs62366226      C       T       .       PASS    AA=C;DP=98      GT:GQ:DP        0|1:100:25      0|0:59:19       0|0:100:54
+5      98653090        .       G       A       .       PASS    AA=G;DP=98      GT:GQ:DP        0|1:100:25      0|0:59:19       0|0:100:54
+16     61472271        rs2914481       G       A       .       PASS    AA=A;DP=119     GT:GQ:DP        0|1:100:25      0|0:59:19       0|0:100:75
+10     20334358        rs7913119       G       A       .       PASS    AA=G;DP=120     GT:GQ:DP        0|1:100:25      0|0:59:20       0|0:100:76
+9      95720868        rs10761306      T       C       .       PASS    AA=C;DP=121     GT:GQ:DP        0|1:100:25      0|0:59:20       0|0:100:80
+5      91771109        rs11959307      A       G       .       PASS    AA=A;DP=118     GT:GQ:DP        0|1:100:25      0|0:59:24       0|0:84:28
+5      23151935        rs10035264      A       T       .       PASS    AA=A;DP=123     GT:GQ:DP        0|1:100:25      0|0:59:25       0|0:100:74
+7      101625661       .       G       A       .       PASS    AA=G;DP=118     GT:GQ:DP        0|1:100:25      0|0:5:7 0|0:100:47
+3      63635112        rs6795326       T       C       .       PASS    AA=T;DP=112     GT:GQ:DP        0|1:100:25      0|0:60:24       0|0:100:50
+19     37625366        rs11670709      A       G       .       PASS    AA=A;DP=134     GT:GQ:DP        0|1:100:25      0|0:60:25       0|0:100:67
+13     75469240        rs9573710       T       G       .       PASS    AA=T;DP=125     GT:GQ:DP        0|1:100:25      0|0:60:30       0|0:100:70
+4      65099132        rs34615404      T       C       .       PASS    AA=T;DP=92      GT:GQ:DP        0|1:100:25      0|0:61:24       0|0:100:45
+10     55512559        rs12573018      C       T       .       PASS    AA=C;DP=108     GT:GQ:DP        0|1:100:25      0|0:61:25       0|0:100:62
+10     75614834        rs11000909      A       G       .       PASS    AA=A;DP=136     GT:GQ:DP        0|1:100:25      0|0:62:19       0|0:100:40
+5      99572557        rs60273991      T       C       .       PASS    AA=T;DP=89      GT:GQ:DP        0|1:100:25      0|0:62:19       0|0:100:46
+9      10079748        rs447925        G       T       .       PASS    AA=G;DP=91      GT:GQ:DP        0|1:100:25      0|0:62:19       0|0:100:47
+9      137496663       rs731267        G       A       .       PASS    AA=G;DP=96      GT:GQ:DP        0|1:100:25      0|0:62:19       0|0:100:53
+8      105499512       .       T       C       .       PASS    AA=A;DP=107     GT:GQ:DP        0|1:100:25      0|0:62:19       0|0:100:62
+16     27886219        rs9941164       C       A       .       PASS    AA=A;DP=113     GT:GQ:DP        0|1:100:25      0|0:62:19       0|0:100:67
+2      211550514       rs319739        C       T       .       PASS    AA=T;DP=111     GT:GQ:DP        0|1:100:25      0|0:62:19       0|0:100:67
+6      32662494        rs4296908       A       T       .       PASS    AA=-;DP=110     GT:GQ:DP        0|1:100:25      0|0:62:19       0|0:100:67
+3      114071265       rs9820264       C       T       .       PASS    AA=T;DP=111     GT:GQ:DP        0|1:100:25      0|0:62:19       0|0:100:68
+5      66051468        rs4425462       G       C       .       PASS    AA=G;DP=117     GT:GQ:DP        0|1:100:25      0|0:62:19       0|0:100:74
+5      155394838       rs1347118       G       A       .       PASS    AA=G;DP=122     GT:GQ:DP        0|1:100:25      0|0:62:19       0|0:100:75
+3      25033640        rs28533455      T       C       .       PASS    AA=T;DP=125     GT:GQ:DP        0|1:100:25      0|0:62:19       0|0:100:81
+20     5980042 rs6053851       C       G       .       PASS    AA=C;DP=92      GT:GQ:DP        0|1:100:25      0|0:62:20       0|0:100:35
+1      104946388       .       G       A       .       PASS    AA=G;DP=107     GT:GQ:DP        0|1:100:25      0|0:62:20       0|0:100:59
+13     32703481        rs7992154       C       T       .       PASS    AA=C;DP=113     GT:GQ:DP        0|1:100:25      0|0:62:20       0|0:100:68
+22     48000936        .       C       T       .       PASS    AA=T;DP=110     GT:GQ:DP        0|1:100:25      0|0:62:20       0|0:100:70
+16     68932023        rs59260159      T       C       .       PASS    AA=N;DP=111     GT:GQ:DP        0|1:100:25      0|0:62:21       0|0:100:68
+5      83505425        .       C       T       .       PASS    AA=C;DP=117     GT:GQ:DP        0|1:100:25      0|0:62:21       0|0:100:68
+5      13921537        rs4701995       G       A       .       PASS    AA=G;DP=119     GT:GQ:DP        0|1:100:25      0|0:62:21       0|0:100:75
+6      116469312       rs11757115      C       T       .       PASS    AA=C;DP=125     GT:GQ:DP        0|1:100:25      0|0:62:21       0|0:100:80
+13     105598860       rs7317376       C       T       .       PASS    AA=C;DP=93      GT:GQ:DP        0|1:100:25      0|0:62:22       0|0:100:36
+12     66536083        .       G       A       .       PASS    AA=g;DP=118     GT:GQ:DP        0|1:100:25      0|0:65:20       0|0:100:34
+5      45938575        .       G       C       .       PASS    AA=.;DP=89      GT:GQ:DP        0|1:100:25      0|0:65:20       0|0:100:44
+6      78292691        rs1777784       T       C       .       PASS    AA=C;DP=146     GT:GQ:DP        0|1:100:25      0|0:65:20       0|0:100:46
+9      78238279        .       T       G       .       PASS    AA=t;DP=108     GT:GQ:DP        0|1:100:25      0|0:65:20       0|0:100:50
+4      63129449        rs28662984      T       C       .       PASS    AA=T;DP=97      GT:GQ:DP        0|1:100:25      0|0:65:20       0|0:100:51
+3      27220490        rs36037509      T       G       .       PASS    AA=N;DP=105     GT:GQ:DP        0|1:100:25      0|0:65:20       0|0:100:61
+3      119463660       .       A       C       .       PASS    AA=A;DP=108     GT:GQ:DP        0|1:100:25      0|0:65:20       0|0:100:64
+2      123293008       .       G       A       .       PASS    AA=g;DP=113     GT:GQ:DP        0|1:100:25      0|0:65:20       0|0:100:68
+9      23486177        .       A       T       .       PASS    AA=A;DP=116     GT:GQ:DP        0|1:100:25      0|0:65:20       0|0:100:68
+14     50372638        rs1040890       A       C       .       PASS    AA=C;DP=115     GT:GQ:DP        0|1:100:25      0|0:65:20       0|0:100:74
+18     61922686        rs62090375      G       A       .       PASS    AA=G;DP=120     GT:GQ:DP        0|1:100:25      0|0:65:20       0|0:100:75
+5      166540583       .       C       T       .       PASS    AA=c;DP=120     GT:GQ:DP        0|1:100:25      0|0:65:20       0|0:100:75
+8      122521378       .       A       G       .       PASS    AA=A;DP=119     GT:GQ:DP        0|1:100:25      0|0:65:20       0|0:100:75
+4      168796610       .       T       C       .       PASS    AA=T;DP=127     GT:GQ:DP        0|1:100:25      0|0:65:20       0|0:100:76
+13     84322563        rs10871200      C       T       .       PASS    AA=C;DP=128     GT:GQ:DP        0|1:100:25      0|0:65:20       0|0:100:84
+10     35506933        .       G       A       .       PASS    AA=G;DP=96      GT:GQ:DP        0|1:100:25      0|0:65:21       0|0:100:50
+7      4202066 .       A       G       .       PASS    AA=A;DP=103     GT:GQ:DP        0|1:100:25      0|0:65:21       0|0:100:57
+2      35801565        .       T       C       .       PASS    AA=T;DP=106     GT:GQ:DP        0|1:100:25      0|0:65:21       0|0:100:61
+6      141493770       .       C       G       .       PASS    AA=C;DP=109     GT:GQ:DP        0|1:100:25      0|0:65:22       0|0:100:63
+8      101845682       .       T       G       .       PASS    AA=T;DP=110     GT:GQ:DP        0|1:100:25      0|0:66:32       0|0:100:53
+18     31758857        rs62102252      G       T       .       PASS    AA=G;DP=116     GT:GQ:DP        0|1:100:25      0|0:67:29       0|0:100:63
+2      156066457       rs10172836      G       T       .       PASS    AA=G;DP=127     GT:GQ:DP        0|1:100:25      0|0:68:21       0|0:100:37
+10     91620584        .       T       C       .       PASS    AA=T;DP=96      GT:GQ:DP        0|1:100:25      0|0:68:21       0|0:100:49
+20     52770839        .       A       C       .       PASS    AA=A;DP=105     GT:GQ:DP        0|1:100:25      0|0:68:21       0|0:100:60
+4      187800464       rs11132405      C       A       .       PASS    AA=C;DP=124     GT:GQ:DP        0|1:100:25      0|0:68:21       0|0:100:79
+16     17340902        rs12597017      C       G       .       PASS    AA=c;DP=135     GT:GQ:DP        0|1:100:25      0|0:68:21       0|0:100:90
+2      33801831        rs7582468       A       C       .       PASS    AA=a;DP=85      GT:GQ:DP        0|1:100:25      0|0:68:22       0|0:100:39
+20     55519428        rs4485614       T       C       .       PASS    AA=T;DP=119     GT:GQ:DP        0|1:100:25      0|0:68:22       0|0:100:72
+19     53032705        .       A       G       .       PASS    AA=a;DP=115     GT:GQ:DP        0|1:100:25      0|0:68:23       0|0:100:68
+3      14961504        .       C       G       .       PASS    AA=G;DP=115     GT:GQ:DP        0|1:100:25      0|0:68:23       0|0:100:69
+5      142140564       rs11739631      G       C       .       PASS    AA=t;DP=115     GT:GQ:DP        0|1:100:25      0|0:68:24       0|0:100:68
+3      3562887 rs28471083      C       T       .       PASS    AA=T;DP=92      GT:GQ:DP        0|1:100:25      0|0:68:25       0|0:100:41
+1      234481513       rs1726663       A       T       .       PASS    AA=A;DP=130     GT:GQ:DP        0|1:100:25      0|0:68:27       0|0:100:38
+3      187539644       rs34501206      G       A       .       PASS    AA=G;DP=132     GT:GQ:DP        0|1:100:25      0|0:69:28       0|0:100:79
+2      31149663        rs6708428       T       C       .       PASS    AA=T;DP=123     GT:GQ:DP        0|1:100:25      0|0:71:22       0|0:100:34
+11     24313040        rs7950920       G       A       .       PASS    AA=A;DP=128     GT:GQ:DP        0|1:100:25      0|0:71:22       0|0:100:39
+6      144548247       rs17073493      T       C       .       PASS    AA=T;DP=93      GT:GQ:DP        0|1:100:25      0|0:71:22       0|0:100:44
+4      45575144        .       C       T       .       PASS    AA=C;DP=103     GT:GQ:DP        0|1:100:25      0|0:71:22       0|0:100:52
+4      153080967       .       C       T       .       PASS    AA=T;DP=106     GT:GQ:DP        0|1:100:25      0|0:71:22       0|0:100:61
+7      34683334        rs2023530       A       G       .       PASS    AA=A;DP=114     GT:GQ:DP        0|1:100:25      0|0:71:22       0|0:100:68
+15     62322230        rs62021599      G       A       .       PASS    AA=A;DP=116     GT:GQ:DP        0|1:100:25      0|0:71:22       0|0:100:70
+3      24660702        rs12107262      G       A       .       PASS    AA=G;DP=119     GT:GQ:DP        0|1:100:25      0|0:71:22       0|0:100:72
+12     113343519       rs16944236      A       G       .       PASS    AA=A;DP=131     GT:GQ:DP        0|1:100:25      0|0:71:22       0|0:100:84
+11     129012065       .       G       A       .       PASS    AA=A;DP=136     GT:GQ:DP        0|1:100:25      0|0:71:22       0|0:100:89
+6      151295784       rs11155759      G       A       .       PASS    AA=G;DP=155     GT:GQ:DP        0|1:100:25      0|0:71:23       0|0:100:52
+9      97434817        .       G       A       .       PASS    AA=G;DP=105     GT:GQ:DP        0|1:100:25      0|0:71:23       0|0:100:56
+10     5045892 .       G       C       .       PASS    AA=G;DP=131     GT:GQ:DP        0|1:100:25      0|0:71:23       0|0:100:79
+1      62214584        rs11802354      C       T       .       PASS    AA=C;DP=122     GT:GQ:DP        0|1:100:25      0|0:71:23       0|0:90:31
+4      173833329       rs1437844       T       G       .       PASS    AA=t;DP=107     GT:GQ:DP        0|1:100:25      0|0:71:24       0|0:100:58
+3      113574386       rs7641311       C       T       .       PASS    AA=C;DP=129     GT:GQ:DP        0|1:100:25      0|0:71:24       0|0:100:83
+2      42477501        .       G       C       .       PASS    AA=G;DP=136     GT:GQ:DP        0|1:100:25      0|0:71:25       0|0:100:86
+12     31728217        rs1115971       G       A       .       PASS    AA=A;DP=130     GT:GQ:DP        0|1:100:25      0|0:72:30       0|0:100:59
+16     13829997        rs7186773       G       A       .       PASS    AA=A;DP=122     GT:GQ:DP        0|1:100:25      0|0:72:34       0|0:100:61
+15     85851666        .       T       C       .       PASS    AA=T;DP=142     GT:GQ:DP        0|1:100:25      0|0:72:34       0|0:100:83
+16     47086325        rs41334049      G       C       .       PASS    AA=G;DP=123     GT:GQ:DP        0|1:100:25      0|0:74:23       0|0:100:34
+11     99712690        rs7948077       G       A       .       PASS    AA=G;DP=129     GT:GQ:DP        0|1:100:25      0|0:74:23       0|0:100:39
+11     37146508        .       G       A       .       PASS    AA=g;DP=138     GT:GQ:DP        0|1:100:25      0|0:74:23       0|0:100:48
+2      163658626       .       T       G       .       PASS    AA=T;DP=101     GT:GQ:DP        0|1:100:25      0|0:74:23       0|0:100:50
+20     13244965        rs1575250       A       G       .       PASS    AA=A;DP=105     GT:GQ:DP        0|1:100:25      0|0:74:23       0|0:100:58
+3      40118258        .       A       G       .       PASS    AA=G;DP=106     GT:GQ:DP        0|1:100:25      0|0:74:23       0|0:100:58
+7      150183780       .       C       A       .       PASS    AA=C;DP=162     GT:GQ:DP        0|1:100:25      0|0:74:23       0|0:100:61
+4      59604014        rs6835282       A       G       .       PASS    AA=A;DP=109     GT:GQ:DP        0|1:100:25      0|0:74:23       0|0:100:63
+16     3053185 rs56001810      A       C       .       PASS    AA=.;DP=118     GT:GQ:DP        0|1:100:25      0|0:74:23       0|0:100:70
+4      13617262        rs6814499       C       A       .       PASS    AA=A;DP=140     GT:GQ:DP        0|1:100:25      0|0:74:23       0|0:100:91
+7      49376631        rs11974428      A       G       .       PASS    AA=A;DP=120     GT:GQ:DP        0|1:100:25      0|0:74:23       0|0:90:31
+2      198782833       rs13387954      C       A       .       PASS    AA=A;DP=95      GT:GQ:DP        0|1:100:25      0|0:74:24       0|0:100:44
+6      72030202        rs58397574      G       A       .       PASS    AA=G;DP=154     GT:GQ:DP        0|1:100:25      0|0:74:24       0|0:100:50
+18     57326042        rs521529        A       G       .       PASS    AA=A;DP=112     GT:GQ:DP        0|1:100:25      0|0:74:24       0|0:100:63
+5      28616094        rs10940740      G       C       .       PASS    AA=G;DP=111     GT:GQ:DP        0|1:100:25      0|0:74:24       0|0:100:65
+10     132163237       rs12572445      A       G       .       PASS    AA=A;DP=121     GT:GQ:DP        0|1:100:25      0|0:74:24       0|0:100:73
+14     91964524        rs8010864       G       A       .       PASS    AA=G;DP=129     GT:GQ:DP        0|1:100:25      0|0:74:24       0|0:100:78
+10     68280327        rs35944058      A       G       .       PASS    AA=A;DP=139     GT:GQ:DP        0|1:100:25      0|0:74:24       0|0:100:89
+19     54173294        .       A       T       .       PASS    AA=A;DP=145     GT:GQ:DP        0|1:100:25      0|0:76:24       0|0:100:56
+10     85361417        .       A       C       .       PASS    AA=A;DP=131     GT:GQ:DP        0|1:100:25      0|0:77:24       0|0:100:37
+6      50458262        .       G       C       .       PASS    AA=G;DP=103     GT:GQ:DP        0|1:100:25      0|0:77:24       0|0:100:54
+1      196009472       rs16829934      A       C       .       PASS    AA=A;DP=118     GT:GQ:DP        0|1:100:25      0|0:77:24       0|0:100:65
+1      233884773       rs12409051      T       C       .       PASS    AA=C;DP=117     GT:GQ:DP        0|1:100:25      0|0:77:24       0|0:100:65
+6      169066624       rs6937480       T       C       .       PASS    AA=T;DP=113     GT:GQ:DP        0|1:100:25      0|0:77:24       0|0:100:65
+1      196552728       rs16829978      C       A       .       PASS    AA=c;DP=131;HM2;HM3     GT:GQ:DP        0|1:100:25      0|0:77:24       0|0:100:81
+16     65102607        rs880530        A       G       .       PASS    AA=G;DP=142     GT:GQ:DP        0|1:100:25      0|0:77:24       0|0:100:91
+15     66626498        .       A       G       .       PASS    AA=A;DP=130     GT:GQ:DP        0|1:100:25      0|0:77:24       0|0:84:28
+2      113211591       .       C       T       .       PASS    AA=T;DP=107     GT:GQ:DP        0|1:100:25      0|0:77:25       0|0:100:54
+14     56530492        rs8011643       T       A       .       PASS    AA=T;DP=106     GT:GQ:DP        0|1:100:25      0|0:77:25       0|0:100:55
+3      32999777        rs9854470       T       C       .       PASS    AA=C;DP=121     GT:GQ:DP        0|1:100:25      0|0:77:25       0|0:100:67
+9      25108777        .       T       C       .       PASS    AA=T;DP=118     GT:GQ:DP        0|1:100:25      0|0:77:26       0|0:100:63
+2      181628024       rs10186928      T       G       .       PASS    AA=T;DP=130     GT:GQ:DP        0|1:100:25      0|0:77:26       0|0:100:78
+14     80519088        rs10139168      C       G       .       PASS    AA=C;DP=126     GT:GQ:DP        0|1:100:25      0|0:77:31       0|0:100:71
+16     73484559        rs4888307       A       G       .       PASS    AA=A;DP=155     GT:GQ:DP        0|1:100:25      0|0:77:35       0|0:100:96
+4      36908677        rs16993352      C       T       .       PASS    AA=C;DP=148     GT:GQ:DP        0|1:100:25      0|0:80:25       0|0:100:52
+19     17713891        .       G       T       .       PASS    AA=G;DP=118     GT:GQ:DP        0|1:100:25      0|0:80:25       0|0:100:67
+13     37147726        rs56312513      C       A       .       PASS    AA=C;DP=125     GT:GQ:DP        0|1:100:25      0|0:80:25       0|0:100:72
+2      107261920       .       A       G       .       PASS    AA=A;DP=125     GT:GQ:DP        0|1:100:25      0|0:80:25       0|0:100:76
+18     59370439        .       C       T       .       PASS    AA=A;DP=125     GT:GQ:DP        0|1:100:25      0|0:80:25       0|0:100:79
+5      78811442        rs12655609      A       T       .       PASS    AA=A;DP=121     GT:GQ:DP        0|1:100:25      0|0:80:25       0|0:87:29
+12     90586407        .       A       G       .       PASS    AA=A;DP=106     GT:GQ:DP        0|1:100:25      0|0:80:26       0|0:100:53
+22     26624801        rs2267127       T       C       .       PASS    AA=T;DP=117     GT:GQ:DP        0|1:100:25      0|0:80:26       0|0:100:67
+3      19207046        .       C       T       .       PASS    AA=T;DP=118     GT:GQ:DP        0|1:100:25      0|0:80:26       0|0:100:67
+2      29441472        .       G       A       .       PASS    AA=g;DP=122     GT:GQ:DP        0|1:100:25      0|0:80:27       0|0:100:70
+9      120754547       .       T       A       .       PASS    AA=T;DP=128     GT:GQ:DP        0|1:100:25      0|0:81:32       0|0:100:74
+18     63189870        .       C       T       .       PASS    AA=C;DP=133     GT:GQ:DP        0|1:100:25      0|0:83:26       0|0:100:44
+11     88630622        rs35029283      C       T       .       PASS    AA=T;DP=97      GT:GQ:DP        0|1:100:25      0|0:83:26       0|0:100:46
+1      46745545        rs35270239      A       G       .       PASS    AA=A;DP=148;HM3 GT:GQ:DP        0|1:100:25      0|0:83:26       0|0:100:49
+6      45853582        .       T       A       .       PASS    AA=T;DP=110     GT:GQ:DP        0|1:100:25      0|0:83:26       0|0:100:55
+7      8928161 rs10256180      G       A       .       PASS    AA=g;DP=130     GT:GQ:DP        0|1:100:25      0|0:83:26       0|0:100:80
+3      193287081       rs972968        C       T       .       PASS    AA=C;DP=133     GT:GQ:DP        0|1:100:25      0|0:83:26       0|0:100:81
+5      71168437        .       T       C       .       PASS    AA=T;DP=133     GT:GQ:DP        0|1:100:25      0|0:83:26       0|0:100:82
+15     67652884        .       G       T       .       PASS    AA=G;DP=137     GT:GQ:DP        0|1:100:25      0|0:83:26       0|0:100:87
+3      170108935       rs1397900       C       G       .       PASS    AA=G;DP=108     GT:GQ:DP        0|1:100:25      0|0:83:27       0|0:100:57
+15     66491155        rs898576        G       A       .       PASS    AA=G;DP=159     GT:GQ:DP        0|1:100:25      0|0:83:27       0|0:100:64
+5      53784913        rs12516133      C       A       .       PASS    AA=C;DP=111     GT:GQ:DP        0|1:100:25      0|0:83:27       0|0:100:64
+1      104655903       .       T       C       .       PASS    AA=T;DP=119     GT:GQ:DP        0|1:100:25      0|0:83:27       0|0:100:69
+14     56659045        .       G       T       .       PASS    AA=G;DP=119     GT:GQ:DP        0|1:100:25      0|0:83:27       0|0:100:69
+20     14540636        .       A       G       .       PASS    AA=A;DP=123     GT:GQ:DP        0|1:100:25      0|0:83:27       0|0:100:75
+2      216215700       rs10165906      C       T       .       PASS    AA=C;DP=142     GT:GQ:DP        0|1:100:25      0|0:83:27       0|0:100:88
+12     18488343        rs10841028      C       T       .       PASS    AA=T;DP=117     GT:GQ:DP        0|1:100:25      0|0:83:28       0|0:100:68
+20     30615846        .       C       G       .       PASS    AA=C;DP=104     GT:GQ:DP        0|1:100:25      0|0:86:27       0|0:100:53
+2      46836602        .       A       G       .       PASS    AA=A;DP=110     GT:GQ:DP        0|1:100:25      0|0:86:27       0|0:100:55
+6      132279972       rs9373002       A       G       .       PASS    AA=A;DP=149     GT:GQ:DP        0|1:100:25      0|0:86:27       0|0:100:56
+3      14831695        rs2342881       T       C       .       PASS    AA=C;DP=154     GT:GQ:DP        0|1:100:25      0|0:86:27       0|0:100:57
+2      139400950       rs4954975       T       C       .       PASS    AA=T;DP=125     GT:GQ:DP        0|1:100:25      0|0:86:27       0|0:100:75
+7      6371708 rs60855818      G       A       .       PASS    AA=G;DP=128     GT:GQ:DP        0|1:100:25      0|0:86:27       0|0:100:78
+17     14302408        .       A       G       .       PASS    AA=a;DP=139     GT:GQ:DP        0|1:100:25      0|0:86:27       0|0:100:93
+9      84220973        .       T       C       .       PASS    AA=T;DP=145     GT:GQ:DP        0|1:100:25      0|0:86:27       0|0:100:94
+20     24391581        rs56342525      A       T       .       PASS    AA=A;DP=106     GT:GQ:DP        0|1:100:25      0|0:86:28       0|0:100:41
+12     109479625       .       G       A       .       PASS    AA=G;DP=128     GT:GQ:DP        0|1:100:25      0|0:86:28       0|0:100:68
+5      142289080       rs13183877      A       G       .       PASS    AA=A;DP=140     GT:GQ:DP        0|1:100:25      0|0:89:28       0|0:100:45
+19     61220743        .       A       G       .       PASS    AA=A;DP=83      GT:GQ:DP        0|1:100:25      0|0:89:28       0|0:75:26
+14     90118924        rs1006117       C       T       .       PASS    AA=C;DP=161     GT:GQ:DP        0|1:100:25      0|0:89:29       0|0:100:52
+11     7697105 rs61890067      C       A       .       PASS    AA=C;DP=119     GT:GQ:DP        0|1:100:25      0|0:89:29       0|0:100:65
+4      48083868        .       C       G       .       PASS    AA=C;DP=138     GT:GQ:DP        0|1:100:25      0|0:89:29       0|0:100:81
+6      110302718       rs4418227       G       C       .       PASS    AA=G;DP=128     GT:GQ:DP        0|1:100:25      0|0:89:31       0|0:100:72
+9      86376314        .       C       T       .       PASS    AA=C;DP=117     GT:GQ:DP        0|1:100:25      0|0:92:29       0|0:100:65
+2      148117542       rs58931281      T       A       .       PASS    AA=T;DP=131     GT:GQ:DP        0|1:100:25      0|0:92:29       0|0:100:82
+5      146988336       .       T       G       .       PASS    AA=T;DP=124     GT:GQ:DP        0|1:100:25      0|0:92:30       0|0:100:69
+7      17587320        rs1375243       C       G       .       PASS    AA=C;DP=139     GT:GQ:DP        0|1:100:25      0|0:92:31       0|0:100:43
+3      190349821       rs12491274      T       C       .       PASS    AA=T;DP=153     GT:GQ:DP        0|1:100:25      0|0:95:30       0|0:100:53
+18     36097981        .       C       A       .       PASS    AA=C;DP=117     GT:GQ:DP        0|1:100:25      0|0:95:30       0|0:100:63
+1      215575040       rs12089637      G       A       .       PASS    AA=A;DP=135;HM2 GT:GQ:DP        0|1:100:25      0|0:95:30       0|0:100:78
+14     71979729        .       G       A       .       PASS    AA=G;DP=138     GT:GQ:DP        0|1:100:25      0|0:95:30       0|0:100:83
+4      144279731       .       C       T       .       PASS    AA=c;DP=141     GT:GQ:DP        0|1:100:25      0|0:95:31       0|0:100:82
+4      160436671       rs10015688      G       A       .       PASS    AA=A;DP=113     GT:GQ:DP        0|1:100:25      0|0:95:32       0|0:100:56
+12     3651719 rs1558249       C       T       .       PASS    AA=T;DP=129     GT:GQ:DP        0|1:100:25      0|0:97:32       0|0:100:71
+4      10239121        .       C       T       .       PASS    AA=C;DP=141     GT:GQ:DP        0|1:100:25      0|0:98:31       0|0:100:43
+18     33525021        rs12454103      C       A       .       PASS    AA=C;DP=140     GT:GQ:DP        0|1:100:25      0|0:98:31       0|0:100:83
+11     70663397        rs11825316      C       T       .       PASS    AA=C;DP=143     GT:GQ:DP        0|1:100:25      0|0:98:32       0|0:100:88
+19     43656115        rs34694816      A       G       .       PASS    AA=G;DP=84      GT:GQ:DP        0|1:100:25      0|0:9:10        0|0:100:51
+16     25777976        rs11864209      G       A       .       PASS    AA=A;DP=99      GT:GQ:DP        0|1:100:25      0|1:100:14      0|0:100:60
+6      79494647        rs1570177       T       C       .       PASS    AA=T;DP=90      GT:GQ:DP        0|1:100:25      0|1:100:15      0|0:100:50
+2      224540590       rs10980 G       C       .       PASS    AA=C;DP=92      GT:GQ:DP        0|1:100:25      0|1:100:17      0|0:100:51
+3      98652303        .       A       G       .       PASS    AA=A;DP=100     GT:GQ:DP        0|1:100:25      0|1:100:17      0|0:100:56
+9      135801593       rs557327        G       A       .       PASS    AA=G;DP=106     GT:GQ:DP        0|1:100:25      0|1:100:17      0|0:100:64
+1      220834353       rs3008656       T       G       .       PASS    AA=G;DP=104     GT:GQ:DP        0|1:100:25      0|1:100:18      0|0:100:61
+7      53111145        rs12534633      A       C       .       PASS    AA=C;DP=111     GT:GQ:DP        0|1:100:25      0|1:100:18      0|0:100:73
+13     38066899        rs17058273      T       C       .       PASS    AA=T;DP=113     GT:GQ:DP        0|1:100:25      0|1:100:18      0|0:90:32
+3      146094271       rs57787683      G       T       .       PASS    AA=T;DP=109     GT:GQ:DP        0|1:100:25      0|1:100:19      0|0:100:65
+4      66944820        rs6823164       T       C       .       PASS    AA=C;DP=121     GT:GQ:DP        0|1:100:25      0|1:100:19      0|0:100:72
+6      151582307       .       T       C       .       PASS    AA=T;DP=120     GT:GQ:DP        0|1:100:25      0|1:100:19      0|0:100:78
+6      92765522        rs2503631       C       T       .       PASS    AA=C;DP=112     GT:GQ:DP        0|1:100:25      0|1:100:20      0|0:100:68
+9      86485391        rs1187349       A       G       .       PASS    AA=A;DP=113     GT:GQ:DP        0|1:100:25      0|1:100:20      0|0:100:69
+16     22846000        rs1476458       C       G       .       PASS    AA=C;DP=125     GT:GQ:DP        0|1:100:25      0|1:100:21      0|0:100:77
+9      670714  rs10815466      G       A       .       PASS    AA=A;DP=114     GT:GQ:DP        0|1:100:25      0|1:100:22      0|0:100:68
+19     40623811        rs8102893       T       C       .       PASS    AA=N;DP=115     GT:GQ:DP        0|1:100:25      0|1:100:22      0|0:100:72
+2      79970666        rs1434096       C       T       .       PASS    AA=C;DP=144     GT:GQ:DP        0|1:100:25      0|1:100:23      0|0:100:51
+11     132808023       rs12800232      T       C       .       PASS    AA=C;DP=108     GT:GQ:DP        0|1:100:25      0|1:100:24      0|0:100:56
+2      190194313       rs10170389      G       A       .       PASS    AA=A;DP=113     GT:GQ:DP        0|1:100:25      0|1:100:24      0|0:100:64
+8      107886017       rs16875098      A       T       .       PASS    AA=A;DP=115     GT:GQ:DP        0|1:100:25      0|1:100:24      0|0:100:65
+7      48409589        rs10278745      A       G       .       PASS    AA=G;DP=156     GT:GQ:DP        0|1:100:25      0|1:100:25      0|0:100:65
+13     75068514        rs7982613       A       G       .       PASS    AA=A;DP=117     GT:GQ:DP        0|1:100:25      0|1:100:25      0|0:100:68
+19     37055692        rs202987        A       G       .       PASS    AA=N;DP=127     GT:GQ:DP        0|1:100:25      0|1:100:25      0|0:100:77
+5      44251239        rs56338120      C       T       .       PASS    AA=T;DP=125     GT:GQ:DP        0|1:100:25      0|1:100:25      0|0:100:77
+21     21906694        rs2258996       A       G       .       PASS    AA=a;DP=131     GT:GQ:DP        0|1:100:25      0|1:100:25      0|0:100:82
+12     129083912       rs1675853       A       G       .       PASS    AA=a;DP=136     GT:GQ:DP        0|1:100:25      0|1:100:25      0|0:100:85
+21     31627043        rs845951        C       G       .       PASS    AA=G;DP=133     GT:GQ:DP        0|1:100:25      0|1:100:25      0|0:100:86
+13     105280642       rs7321247       G       T       .       PASS    AA=T;DP=116     GT:GQ:DP        0|1:100:25      0|1:100:25      0|0:75:26
+5      118147194       rs2376850       A       T       .       PASS    AA=T;DP=122     GT:GQ:DP        0|1:100:25      0|1:100:25      0|0:93:32
+4      186158499       rs7667230       C       T       .       PASS    AA=C;DP=148     GT:GQ:DP        0|1:100:25      0|1:100:26      0|0:100:52
+16     17769593        rs8056612       C       T       .       PASS    AA=C;DP=100     GT:GQ:DP        0|1:100:25      0|1:100:27      0|0:100:49
+6      47774880        rs1329533       T       G       .       PASS    AA=T;DP=127     GT:GQ:DP        0|1:100:25      0|1:100:27      0|0:100:75
+5      82785156        rs10462400      C       T       .       PASS    AA=C;DP=143     GT:GQ:DP        0|1:100:25      0|1:100:28      0|0:100:41
+7      120959438       rs4731028       T       A       .       PASS    AA=A;DP=107     GT:GQ:DP        0|1:100:25      0|1:100:28      0|0:100:54
+2      5636371 rs11676869      T       C       .       PASS    AA=C;DP=127     GT:GQ:DP        0|1:100:25      0|1:100:29      0|0:100:75
+9      3933997 rs7024842       C       T       .       PASS    AA=T;DP=135     GT:GQ:DP        0|1:100:25      0|1:100:29      0|0:100:81
+2      141875437       rs4485511       T       C       .       PASS    AA=T;DP=112     GT:GQ:DP        0|1:100:25      0|1:100:30      0|0:100:57
+1      163483980       rs1506946       G       A       .       PASS    AA=G;DP=137;HM2;HM3     GT:GQ:DP        0|1:100:25      0|1:100:30      0|0:100:78
+8      139030606       rs989411        G       A       .       PASS    AA=G;DP=136     GT:GQ:DP        0|1:100:25      0|1:100:31      0|0:100:75
+7      46038505        rs28620693      G       A       .       PASS    AA=G;DP=119     GT:GQ:DP        0|1:100:25      0|1:100:32      0|0:100:65
+16     26035230        rs8063428       G       A       .       PASS    AA=G;DP=142     GT:GQ:DP        0|1:100:25      0|1:100:33      0|0:100:88
+20     50929747        rs1923106       G       C       .       PASS    AA=C;DP=146     GT:GQ:DP        0|1:100:25      0|1:100:34      0|0:100:46
+3      34713604        rs12495568      T       G       .       PASS    AA=T;DP=133     GT:GQ:DP        0|1:100:25      0|1:100:34      0|0:100:74
+4      114253562       rs7682237       T       G       .       PASS    AA=G;DP=148     GT:GQ:DP        0|1:100:25      0|1:100:41      0|0:100:80
+2      237701371       rs4663240       G       T       .       PASS    AA=G;DP=95      GT:GQ:DP        0|1:100:25      0|1:12:21       0|0:100:50
+15     34205681        rs16962582      C       T       .       PASS    AA=C;DP=99      GT:GQ:DP        0|1:100:25      0|1:34:9        0|0:100:64
+14     63938895        rs11158539      C       T       .       PASS    AA=C;DP=79      GT:GQ:DP        0|1:100:25      0|1:37:16       0|0:100:38
+11     104331814       rs666723        A       G       .       PASS    AA=A;DP=123     GT:GQ:DP        0|1:100:25      0|1:46:28       0|0:100:71
+11     33997244        rs4756095       C       T       .       PASS    AA=C;DP=98      GT:GQ:DP        0|1:100:25      0|1:60:15       0|0:100:58
+6      6370124 .       T       C       .       PASS    AA=t;DP=126     GT:GQ:DP        0|1:100:25      0|1:64:24       0|0:100:78
+12     90854771        rs9651917       T       A       .       PASS    AA=T;DP=124     GT:GQ:DP        0|1:100:25      0|1:64:24       0|0:100:80
+10     62112838        rs60991037      C       A       .       PASS    AA=C;DP=82      GT:GQ:DP        0|1:100:25      0|1:67:14       0|0:99:41
+7      89689706        rs7808565       A       G       .       PASS    AA=A;DP=123     GT:GQ:DP        0|1:100:25      0|1:67:17       0|0:65:33
+16     79184383        rs16953631      T       C       .       PASS    AA=T;DP=144     GT:GQ:DP        0|1:100:25      0|1:70:19       0|0:100:90
+7      24423110        rs17149463      A       G       .       PASS    AA=A;DP=131     GT:GQ:DP        0|1:100:25      0|1:70:23       0|0:100:39
+4      18871941        rs312351        C       T       .       PASS    AA=C;DP=112     GT:GQ:DP        0|1:100:25      0|1:72:16       0|0:72:31
+1      160303328       rs16827673      C       A       .       PASS    AA=A;DP=104;HM2 GT:GQ:DP        0|1:100:25      0|1:76:16       0|0:100:64
+2      40700457        rs17026380      G       A       .       PASS    AA=A;DP=107     GT:GQ:DP        0|1:100:25      0|1:78:18       0|0:100:68
+5      107562826       .       A       C       .       PASS    AA=A;DP=97      GT:GQ:DP        0|1:100:25      0|1:79:20       0|0:100:52
+1      75695153        rs17096926      C       T       .       PASS    AA=T;DP=108     GT:GQ:DP        0|1:100:25      0|1:84:21       0|0:100:61
+5      101804197       rs6871966       T       C       .       PASS    AA=C;DP=117     GT:GQ:DP        0|1:100:25      0|1:86:22       0|0:100:69
+12     31900338        rs17508967      G       C       .       PASS    AA=g;DP=146     GT:GQ:DP        0|1:100:25      0|1:86:23       0|0:100:46
+4      117853413       rs7685005       T       C       .       PASS    AA=C;DP=106     GT:GQ:DP        0|1:100:25      0|1:91:19       0|0:100:61
+12     70247867        rs1795462       A       G       .       PASS    AA=G;DP=112     GT:GQ:DP        0|1:100:25      0|1:92:12       0|0:100:78
+2      12204483        rs13011453      G       A       .       PASS    AA=A;DP=132     GT:GQ:DP        0|1:100:25      0|1:94:17       0|0:100:90
+6      96942257        rs2472923       A       G       .       PASS    AA=N;DP=100     GT:GQ:DP        0|1:100:25      0|1:94:20       0|0:100:56
+12     90417619        .       C       T       .       PASS    AA=C;DP=131     GT:GQ:DP        0|1:100:25      0|1:96:26       0|0:100:83
+10     34307099        .       T       C       .       PASS    AA=T;DP=109     GT:GQ:DP        0|1:100:25      0|1:98:20       0|0:100:62
+18     67579289        rs4389223       C       T       .       PASS    AA=T;DP=98      GT:GQ:DP        0|1:100:25      0|1:98:21       0|0:100:54
+6      20123747        rs515788        A       G       .       PASS    AA=A;DP=132     GT:GQ:DP        0|1:100:25      0|1:98:28       0|0:99:34
+12     112735725       rs4767133       C       T       .       PASS    AA=T;DP=144     GT:GQ:DP        0|1:100:25      0|1:99:25       0|0:100:51
+13     108406716       rs9514947       C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        0|1:100:25      1|1:19:18       0|1:100:73
+15     59775224        rs2899672       G       T       .       PASS    AA=T;DP=104     GT:GQ:DP        0|1:100:25      1|1:20:16       0|1:100:61
+13     70284455        rs1114565       A       G       .       PASS    AA=G;DP=114     GT:GQ:DP        0|1:100:25      1|1:21:19       0|1:100:32
+8      2036648 rs11136465      C       A       .       PASS    AA=a;DP=92      GT:GQ:DP        0|1:100:25      1|1:21:8        0|1:100:59
+4      170997642       rs10012664      G       A       .       PASS    AA=A;DP=100     GT:GQ:DP        0|1:100:25      1|1:24:18       0|1:100:54
+5      21947273        rs7701773       T       C       .       PASS    AA=T;DP=96      GT:GQ:DP        0|1:100:25      1|1:27:10       0|1:100:61
+16     29125205        rs8057297       A       G       .       PASS    AA=a;DP=75      GT:GQ:DP        0|1:100:25      1|1:30:11       0|1:100:31
+3      176274609       rs11917725      A       G       .       PASS    AA=a;DP=101     GT:GQ:DP        0|1:100:25      1|1:33:13       0|1:100:60
+2      196903889       rs6727129       C       T       .       PASS    AA=T;DP=108     GT:GQ:DP        0|1:100:25      1|1:33:19       0|1:100:67
+12     113916233       rs1863726       A       C       .       PASS    AA=C;DP=112     GT:GQ:DP        0|1:100:25      1|1:33:23       0|1:100:65
+14     105373980       rs10136437      G       T       .       PASS    AA=T;DP=90      GT:GQ:DP        0|1:100:25      1|1:36:13       0|1:100:53
+21     17157265        rs415277        C       G       .       PASS    AA=G;DP=111     GT:GQ:DP        0|1:100:25      1|1:36:15       0|1:100:68
+7      52097402        rs62463248      T       A       .       PASS    AA=A;DP=85      GT:GQ:DP        0|1:100:25      1|1:36:19       0|1:100:41
+14     45202630        rs1266278       G       T       .       PASS    AA=G;DP=110     GT:GQ:DP        0|1:100:25      1|1:37:21       0|1:100:67
+5      3203098 rs1215416       G       A       .       PASS    AA=G;DP=100     GT:GQ:DP        0|1:100:25      1|1:39:14       0|1:100:61
+13     63346295        rs635223        A       T       .       PASS    AA=T;DP=106     GT:GQ:DP        0|1:100:25      1|1:39:14       0|1:100:67
+1      238818012       rs6669259       A       T       .       PASS    AA=T;DP=105;HM2 GT:GQ:DP        0|1:100:25      1|1:39:14       0|1:100:68
+10     5610382 rs7896833       G       A       .       PASS    AA=A;DP=95      GT:GQ:DP        0|1:100:25      1|1:39:15       0|1:100:54
+10     9140970 rs2185817       C       G       .       PASS    AA=G;DP=107     GT:GQ:DP        0|1:100:25      1|1:39:15       0|1:100:68
+6      2515400 rs9392399       C       T       .       PASS    AA=T;DP=90      GT:GQ:DP        0|1:100:25      1|1:42:15       0|1:100:48
+8      20558546        rs6586923       T       C       .       PASS    AA=T;DP=101     GT:GQ:DP        0|1:100:25      1|1:42:15       0|1:100:62
+3      118273691       rs2221847       C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        0|1:100:25      1|1:42:15       0|1:100:71
+1      86379413        rs1414602       C       T       .       PASS    AA=T;DP=92;HM2  GT:GQ:DP        0|1:100:25      1|1:42:16       0|1:100:53
+5      124593723       rs7738015       A       T       .       PASS    AA=T;DP=108     GT:GQ:DP        0|1:100:25      1|1:45:16       0|1:100:65
+7      137089383       rs56981573      A       G       .       PASS    AA=G;DP=113     GT:GQ:DP        0|1:100:25      1|1:45:16       0|1:100:73
+20     17368530        rs2269013       T       C       .       PASS    AA=C;DP=106     GT:GQ:DP        0|1:100:25      1|1:45:18       0|1:100:60
+17     48884138        rs17711371      C       T       .       PASS    AA=C;DP=98      GT:GQ:DP        0|1:100:25      1|1:48:17       0|1:100:55
+3      87541530        rs11917983      G       A       .       PASS    AA=A;DP=98      GT:GQ:DP        0|1:100:25      1|1:48:17       0|1:100:55
+2      138072805       rs352187        G       A       .       PASS    AA=A;DP=111     GT:GQ:DP        0|1:100:25      1|1:48:17       0|1:100:71
+6      76020671        rs381141        G       A       .       PASS    AA=A;DP=111     GT:GQ:DP        0|1:100:25      1|1:48:18       0|1:100:65
+6      81092456        rs7747016       C       A       .       PASS    AA=G;DP=128     GT:GQ:DP        0|1:100:25      1|1:49:24       0|1:100:80
+2      165262904       rs9653282       A       T       .       PASS    AA=T;DP=90      GT:GQ:DP        0|1:100:25      1|1:51:18       0|1:100:48
+15     33823009        rs2647677       T       C       .       PASS    AA=T;DP=102     GT:GQ:DP        0|1:100:25      1|1:51:18       0|1:100:57
+4      80908190        rs7662090       A       T       .       PASS    AA=T;DP=93      GT:GQ:DP        0|1:100:25      1|1:51:19       0|1:100:38
+4      167446198       rs57288733      A       G       .       PASS    AA=A;DP=99      GT:GQ:DP        0|1:100:25      1|1:51:19       0|1:100:56
+4      121756619       rs10020594      C       T       .       PASS    AA=C;DP=102     GT:GQ:DP        0|1:100:25      1|1:51:21       0|1:100:56
+5      113574758       rs9326915       G       T       .       PASS    AA=T;DP=114     GT:GQ:DP        0|1:100:25      1|1:52:23       0|1:100:27
+1      119391943       rs2645301       C       T       .       PASS    AA=T;DP=114;HM2 GT:GQ:DP        0|1:100:25      1|1:52:25       0|1:100:66
+2      105018754       rs11895517      C       T       .       PASS    AA=T;DP=113     GT:GQ:DP        0|1:100:25      1|1:54:19       0|1:100:29
+3      8145850 rs1356239       G       A       .       PASS    AA=G;DP=108     GT:GQ:DP        0|1:100:25      1|1:54:19       0|1:100:45
+16     56962424        rs62042562      T       C       .       PASS    AA=T;DP=98      GT:GQ:DP        0|1:100:25      1|1:54:19       0|1:100:58
+12     129252993       rs1875120       C       T       .       PASS    AA=T;DP=114     GT:GQ:DP        0|1:100:25      1|1:54:20       0|1:100:68
+22     28713262        rs2017677       G       C       .       PASS    AA=C;DP=121     GT:GQ:DP        0|1:100:25      1|1:57:20       0|1:100:76
+9      96611276        rs356127        A       G       .       PASS    AA=G;DP=120     GT:GQ:DP        0|1:100:25      1|1:57:20       0|1:100:76
+12     126078705       rs1978360       C       T       .       PASS    AA=t;DP=113     GT:GQ:DP        0|1:100:25      1|1:57:21       0|1:100:64
+1      83947000        rs6576927       G       T       .       PASS    AA=G;DP=112;HM2 GT:GQ:DP        0|1:100:25      1|1:60:21       0|1:100:67
+5      127931237       rs13153812      C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        0|1:100:25      1|1:60:22       0|1:100:67
+18     61874530        rs2715297       C       A       .       PASS    AA=A;DP=88      GT:GQ:DP        0|1:100:25      1|1:69:24       0|1:100:39
+7      8843781 rs978514        T       C       .       PASS    AA=C;DP=106     GT:GQ:DP        0|1:100:25      1|1:69:24       0|1:100:56
+11     19332661        rs16936578      G       A       .       PASS    AA=G;DP=120     GT:GQ:DP        0|1:100:25      1|1:69:24       0|1:100:71
+12     95861741        rs249580        C       T       .       PASS    AA=T;DP=122     GT:GQ:DP        0|1:100:25      1|1:69:25       0|1:100:68
+2      215752131       rs58133666      T       A       .       PASS    AA=T;DP=115     GT:GQ:DP        0|1:100:25      1|1:72:25       0|1:100:65
+10     54553583        rs11591938      G       A       .       PASS    AA=A;DP=119     GT:GQ:DP        0|1:100:25      1|1:72:25       0|1:100:67
+6      62592457        rs522914        T       A       .       PASS    AA=T;DP=123     GT:GQ:DP        0|1:100:25      1|1:72:27       0|1:100:69
+7      42337892        rs6954789       T       C       .       PASS    AA=C;DP=125     GT:GQ:DP        0|1:100:25      1|1:75:26       0|1:100:32
+6      164874673       rs1497738       G       T       .       PASS    AA=T;DP=124     GT:GQ:DP        0|1:100:25      1|1:78:28       0|1:100:69
+3      175868571       rs4608710       T       G       .       PASS    AA=T;DP=106     GT:GQ:DP        0|1:100:25      1|1:7:16        0|1:100:68
+10     103398274       rs7914471       G       A       .       PASS    AA=G;DP=138     GT:GQ:DP        0|1:100:25      1|1:81:29       0|1:100:85
+7      103051292       rs17153769      G       C       .       PASS    AA=G;DP=117     GT:GQ:DP        0|1:100:25      1|1:84:29       0|1:100:61
+5      180051326       rs11249744      G       A       .       PASS    AA=A;DP=137     GT:GQ:DP        0|1:100:25      1|1:84:30       0|1:100:83
+3      24614301        .       C       T       .       PASS    AA=C;DP=131     GT:GQ:DP        0|1:100:26      0|0:100:32      0|0:100:71
+6      6311540 rs1058242       G       A       .       PASS    AA=G;DP=138     GT:GQ:DP        0|1:100:26      0|0:100:33      0|0:100:40
+7      153010110       .       A       G       .       PASS    AA=A;DP=131     GT:GQ:DP        0|1:100:26      0|0:100:33      0|0:100:73
+12     18765957        .       T       G       .       PASS    AA=T;DP=129     GT:GQ:DP        0|1:100:26      0|0:100:33      0|0:100:74
+5      13454387        rs4702938       A       G       .       PASS    AA=A;DP=129     GT:GQ:DP        0|1:100:26      0|0:100:33      0|0:90:32
+17     27266909        rs879945        G       A       .       PASS    AA=C;DP=155     GT:GQ:DP        0|1:100:26      0|0:100:34      0|0:100:47
+4      46331627        .       G       A       .       PASS    AA=A;DP=129     GT:GQ:DP        0|1:100:26      0|0:100:34      0|0:100:68
+1      151415432       .       C       G       .       PASS    AA=g;DP=149     GT:GQ:DP        0|1:100:26      0|0:100:34      0|0:100:91
+8      137198750       .       A       G       .       PASS    AA=A;DP=134     GT:GQ:DP        0|1:100:26      0|0:100:35      0|0:99:33
+1      181929052       rs10911412      T       C       .       PASS    AA=T;DP=140;HM2;HM3     GT:GQ:DP        0|1:100:26      0|0:100:36      0|0:100:75
+15     45067947        rs6493258       A       C       .       PASS    AA=A;DP=137     GT:GQ:DP        0|1:100:26      0|0:100:38      0|0:100:73
+3      67084730        rs2364282       G       C       .       PASS    AA=g;DP=141     GT:GQ:DP        0|1:100:26      0|0:100:38      0|0:100:78
+10     25094511        .       C       T       .       PASS    AA=C;DP=133     GT:GQ:DP        0|1:100:26      0|0:100:42      0|0:100:63
+8      89823176        rs11997212      G       A       .       PASS    AA=G;DP=131     GT:GQ:DP        0|1:100:26      0|0:100:42      0|0:100:64
+1      186077765       rs10158012      C       G       .       PASS    AA=c;DP=140     GT:GQ:DP        0|1:100:26      0|0:100:44      0|0:100:70
+16     29230081        .       G       C       .       PASS    AA=c;DP=114     GT:GQ:DP        0|1:100:26      0|0:16:21       0|0:100:68
+9      128099896       rs944212        G       T       .       PASS    AA=T;DP=90      GT:GQ:DP        0|1:100:26      0|0:19:13       0|0:100:40
+11     75693856        .       G       A       .       PASS    AA=G;DP=92      GT:GQ:DP        0|1:100:26      0|0:20:8        0|0:100:55
+13     108193571       rs9587664       C       T       .       PASS    AA=C;DP=111     GT:GQ:DP        0|1:100:26      0|0:21:16       0|0:100:69
+8      17376189        .       C       T       .       PASS    AA=C;DP=107     GT:GQ:DP        0|1:100:26      0|0:25:17       0|0:100:63
+7      66309229        .       C       T       .       PASS    AA=c;DP=125     GT:GQ:DP        0|1:100:26      0|0:27:18       0|0:100:83
+8      27453168        rs59059490      C       T       .       PASS    AA=C;DP=96      GT:GQ:DP        0|1:100:26      0|0:29:13       0|0:100:57
+8      129865434       .       C       A       .       PASS    AA=C;DP=121     GT:GQ:DP        0|1:100:26      0|0:30:23       0|0:100:56
+18     57981838        .       A       C       .       PASS    AA=A;DP=127     GT:GQ:DP        0|1:100:26      0|0:30:23       0|0:100:67
+9      116148642       rs57967306      T       G       .       PASS    AA=T;DP=132     GT:GQ:DP        0|1:100:26      0|0:32:17       0|0:100:91
+1      104209280       rs1930191       G       T       .       PASS    AA=T;DP=133     GT:GQ:DP        0|1:100:26      0|0:32:20       0|0:100:40
+2      848561  rs35192701      C       T       .       PASS    AA=C;DP=103     GT:GQ:DP        0|1:100:26      0|0:32:9        0|0:100:53
+16     54542633        .       C       T       .       PASS    AA=C;DP=95      GT:GQ:DP        0|1:100:26      0|0:34:15       0|0:100:56
+13     100214682       .       C       T       .       PASS    AA=T;DP=99      GT:GQ:DP        0|1:100:26      0|0:38:11       0|0:100:54
+12     51310539        rs17117243      G       C       .       PASS    AA=G;DP=106     GT:GQ:DP        0|1:100:26      0|0:38:11       0|0:100:69
+8      1781121 rs35717593      C       A       .       PASS    AA=C;DP=107     GT:GQ:DP        0|1:100:26      0|0:38:11       0|0:100:71
+5      94635980        rs669335        C       T       .       PASS    AA=C;DP=119     GT:GQ:DP        0|1:100:26      0|0:39:22       0|0:100:75
+2      9207146 .       C       T       .       PASS    AA=C;DP=86      GT:GQ:DP        0|1:100:26      0|0:40:17       0|0:73:36
+4      122772297       rs34564965      T       G       .       PASS    AA=t;DP=81      GT:GQ:DP        0|1:100:26      0|0:41:12       0|0:100:44
+5      72252406        rs155630        T       G       .       PASS    AA=T;DP=104     GT:GQ:DP        0|1:100:26      0|0:41:12       0|0:100:52
+15     75818292        rs35699564      C       A       .       PASS    AA=C;DP=121     GT:GQ:DP        0|1:100:26      0|0:41:12       0|0:100:82
+22     33952171        .       G       A       .       PASS    AA=G;DP=94      GT:GQ:DP        0|1:100:26      0|0:41:13       0|0:100:56
+15     53250057        rs28620421      G       A       .       PASS    AA=G;DP=102     GT:GQ:DP        0|1:100:26      0|0:41:13       0|0:100:64
+9      94642739        .       C       T       .       PASS    AA=C;DP=108     GT:GQ:DP        0|1:100:26      0|0:41:17       0|0:100:65
+5      7711870 rs877887        G       A       .       PASS    AA=G;DP=114     GT:GQ:DP        0|1:100:26      0|0:41:22       0|0:100:67
+11     97637763        rs11608228      A       G       .       PASS    AA=A;DP=101     GT:GQ:DP        0|1:100:26      0|0:41:23       0|0:100:53
+8      47316248        .       T       A       .       PASS    AA=.;DP=121     GT:GQ:DP        0|1:100:26      0|0:42:13       0|0:100:83
+1      192988019       rs10921645      C       A       .       PASS    AA=C;DP=92;HM2  GT:GQ:DP        0|1:100:26      0|0:44:13       0|0:100:53
+1      51593634        rs1802598       A       C       .       PASS    AA=A;DP=100     GT:GQ:DP        0|1:100:26      0|0:44:13       0|0:100:64
+17     60047432        rs7210217       C       T       .       PASS    AA=C;DP=113     GT:GQ:DP        0|1:100:26      0|0:44:13       0|0:100:69
+16     880354  rs58389057      T       C       .       PASS    AA=C;DP=117     GT:GQ:DP        0|1:100:26      0|0:44:13       0|0:100:79
+2      13718817        rs1606039       A       T       .       PASS    AA=T;DP=72      GT:GQ:DP        0|1:100:26      0|0:44:13       0|0:90:30
+9      135832155       .       G       A       .       PASS    AA=g;DP=96      GT:GQ:DP        0|1:100:26      0|0:44:15       0|0:100:42
+4      112431267       rs28885752      C       G       .       PASS    AA=C;DP=114     GT:GQ:DP        0|1:100:26      0|0:44:15       0|0:100:71
+15     91160511        rs12592960      A       G       .       PASS    AA=a;DP=123     GT:GQ:DP        0|1:100:26      0|0:45:20       0|0:100:36
+14     37552826        .       C       T       .       PASS    AA=c;DP=120     GT:GQ:DP        0|1:100:26      0|0:46:19       0|0:100:75
+13     21885299        .       A       C       .       PASS    AA=c;DP=110     GT:GQ:DP        0|1:100:26      0|0:46:25       0|0:100:58
+21     39663300        .       C       T       .       PASS    AA=c;DP=114     GT:GQ:DP        0|1:100:26      0|0:46:25       0|0:100:66
+8      142728804       rs6993695       C       T       .       PASS    AA=C;DP=95      GT:GQ:DP        0|1:100:26      0|0:47:14       0|0:100:39
+14     41113748        .       G       A       .       PASS    AA=G;DP=94      GT:GQ:DP        0|1:100:26      0|0:47:14       0|0:100:54
+4      7813402 rs11736215      A       C       .       PASS    AA=A;DP=101     GT:GQ:DP        0|1:100:26      0|0:47:14       0|0:100:63
+5      99139912        .       C       T       .       PASS    AA=C;DP=101     GT:GQ:DP        0|1:100:26      0|0:47:14       0|0:100:63
+15     33235479        rs4923912       T       C       .       PASS    AA=C;DP=105     GT:GQ:DP        0|1:100:26      0|0:47:15       0|0:100:65
+4      58725407        rs7687609       C       T       .       PASS    AA=C;DP=107     GT:GQ:DP        0|1:100:26      0|0:47:15       0|0:100:65
+16     86915280        rs62047123      A       G       .       PASS    AA=A;DP=103     GT:GQ:DP        0|1:100:26      0|0:47:16       0|0:100:62
+6      23656329        rs2066911       G       A       .       PASS    AA=G;DP=105     GT:GQ:DP        0|1:100:26      0|0:47:16       0|0:100:63
+2      140493155       .       G       A       .       PASS    AA=A;DP=107     GT:GQ:DP        0|1:100:26      0|0:47:16       0|0:100:68
+18     6391696 .       G       A       .       PASS    AA=G;DP=101     GT:GQ:DP        0|1:100:26      0|0:49:26       0|0:100:51
+12     23508877        .       C       T       .       PASS    AA=C;DP=139     GT:GQ:DP        0|1:100:26      0|0:49:26       0|0:100:86
+22     18608594        .       G       A       .       PASS    AA=G;DP=100     GT:GQ:DP        0|1:100:26      0|0:50:15       0|0:100:49
+4      175214945       .       G       C       .       PASS    AA=G;DP=100     GT:GQ:DP        0|1:100:26      0|0:50:15       0|0:100:55
+17     77998011        .       C       A       .       PASS    AA=C;DP=108     GT:GQ:DP        0|1:100:26      0|0:50:15       0|0:100:58
+4      132664252       .       T       C       .       PASS    AA=T;DP=105     GT:GQ:DP        0|1:100:26      0|0:50:15       0|0:100:62
+13     96917525        rs12873919      T       C       .       PASS    AA=T;DP=106     GT:GQ:DP        0|1:100:26      0|0:50:15       0|0:100:64
+10     94922740        rs1927476       G       T       .       PASS    AA=G;DP=123     GT:GQ:DP        0|1:100:26      0|0:50:15       0|0:87:29
+2      129473066       .       A       G       .       PASS    AA=A;DP=88      GT:GQ:DP        0|1:100:26      0|0:50:16       0|0:100:45
+10     25410882        rs7905401       G       T       .       PASS    AA=G;DP=128     GT:GQ:DP        0|1:100:26      0|0:51:24       0|0:100:76
+3      66997379        rs7648743       T       C       .       PASS    AA=C;DP=107     GT:GQ:DP        0|1:100:26      0|0:52:20       0|0:100:60
+4      3311424 rs7687590       G       A       .       PASS    AA=G;DP=146     GT:GQ:DP        0|1:100:26      0|0:53:16       0|0:100:54
+10     43246252        .       A       G       .       PASS    AA=A;DP=97      GT:GQ:DP        0|1:100:26      0|0:53:16       0|0:100:55
+1      2049998 .       C       T       .       PASS    AA=C;DP=104     GT:GQ:DP        0|1:100:26      0|0:53:16       0|0:100:61
+16     86428108        rs34831152      A       G       .       PASS    AA=A;DP=115     GT:GQ:DP        0|1:100:26      0|0:53:16       0|0:100:74
+3      110081060       .       C       T       .       PASS    AA=C;DP=123     GT:GQ:DP        0|1:100:26      0|0:53:16       0|0:100:83
+3      159917980       rs55678388      C       T       .       PASS    AA=C;DP=99      GT:GQ:DP        0|1:100:26      0|0:53:17       0|0:100:52
+1      245413297       rs12027638      A       G       .       PASS    AA=A;DP=147;HM2;HM3     GT:GQ:DP        0|1:100:26      0|0:53:17       0|0:100:61
+13     113063016       rs4907618       A       G       .       PASS    AA=A;DP=105     GT:GQ:DP        0|1:100:26      0|0:53:17       0|0:100:62
+9      103332020       rs12003943      A       C       .       PASS    AA=a;DP=111     GT:GQ:DP        0|1:100:26      0|0:53:17       0|0:100:69
+15     23990455        .       C       A       .       PASS    AA=A;DP=110     GT:GQ:DP        0|1:100:26      0|0:53:18       0|0:100:66
+1      94215197        rs743115        C       T       .       PASS    AA=C;DP=117     GT:GQ:DP        0|1:100:26      0|0:53:18       0|0:100:73
+12     51276417        rs7295084       C       A       .       PASS    AA=C;DP=114     GT:GQ:DP        0|1:100:26      0|0:54:25       0|0:100:61
+10     132706631       rs7095284       A       G       .       PASS    AA=A;DP=132     GT:GQ:DP        0|1:100:26      0|0:54:27       0|0:100:79
+14     69178237        .       A       T       .       PASS    AA=A;DP=112     GT:GQ:DP        0|1:100:26      0|0:55:26       0|0:100:58
+1      93295194        rs2249723       T       A       .       PASS    AA=T;DP=122     GT:GQ:DP        0|1:100:26      0|0:55:26       0|0:100:72
+1      206511353       rs10159100      G       A       .       PASS    AA=G;DP=131;HM2 GT:GQ:DP        0|1:100:26      0|0:55:32       0|0:100:73
+2      131797297       .       G       A       .       PASS    AA=G;DP=101     GT:GQ:DP        0|1:100:26      0|0:56:17       0|0:100:55
+11     128225435       rs17137971      T       C       .       PASS    AA=T;DP=146     GT:GQ:DP        0|1:100:26      0|0:56:17       0|0:100:57
+2      207546702       .       T       G       .       PASS    AA=T;DP=108     GT:GQ:DP        0|1:100:26      0|0:56:17       0|0:100:62
+8      5082034 rs11785418      A       G       .       PASS    AA=A;DP=113     GT:GQ:DP        0|1:100:26      0|0:56:17       0|0:100:65
+3      121205538       rs9867915       G       A       .       PASS    AA=G;DP=111     GT:GQ:DP        0|1:100:26      0|0:56:17       0|0:100:70
+8      122565415       rs59352468      G       A       .       PASS    AA=A;DP=111     GT:GQ:DP        0|1:100:26      0|0:56:18       0|0:100:48
+10     70736205        .       A       G       .       PASS    AA=A;DP=94      GT:GQ:DP        0|1:100:26      0|0:56:18       0|0:100:50
+7      100807946       rs28493648      A       G       .       PASS    AA=G;DP=98      GT:GQ:DP        0|1:100:26      0|0:56:18       0|0:100:54
+8      107243811       .       G       A       .       PASS    AA=G;DP=106     GT:GQ:DP        0|1:100:26      0|0:56:18       0|0:100:58
+4      87200886        rs1002484       T       C       .       PASS    AA=T;DP=120     GT:GQ:DP        0|1:100:26      0|0:56:18       0|0:100:76
+1      178322608       rs7540856       A       C       .       PASS    AA=A;DP=96;HM2;HM3      GT:GQ:DP        0|1:100:26      0|0:56:19       0|0:100:48
+2      197126674       rs11888703      A       C       .       PASS    AA=A;DP=140     GT:GQ:DP        0|1:100:26      0|0:57:33       0|0:100:79
+7      91011738        rs2192806       A       G       .       PASS    AA=G;DP=90      GT:GQ:DP        0|1:100:26      0|0:59:18       0|0:100:44
+4      133183901       rs28445443      A       G       .       PASS    AA=A;DP=101     GT:GQ:DP        0|1:100:26      0|0:59:18       0|0:100:55
+10     87145309        .       A       G       .       PASS    AA=A;DP=108     GT:GQ:DP        0|1:100:26      0|0:59:18       0|0:100:63
+6      114665915       rs6906286       A       G       .       PASS    AA=A;DP=108     GT:GQ:DP        0|1:100:26      0|0:59:18       0|0:100:63
+7      10363476        .       A       G       .       PASS    AA=G;DP=115     GT:GQ:DP        0|1:100:26      0|0:59:18       0|0:100:69
+1      117128460       .       G       C       .       PASS    AA=C;DP=114     GT:GQ:DP        0|1:100:26      0|0:59:18       0|0:100:73
+2      47619047        rs57322452      G       T       .       PASS    AA=G;DP=116     GT:GQ:DP        0|1:100:26      0|0:59:18       0|0:100:73
+17     812310  .       A       G       .       PASS    AA=A;DP=118     GT:GQ:DP        0|1:100:26      0|0:59:18       0|0:100:75
+8      117990836       rs3020159       G       A       .       PASS    AA=A;DP=101     GT:GQ:DP        0|1:100:26      0|0:59:19       0|0:100:56
+8      50972297        rs404309        G       A       .       PASS    AA=G;DP=107     GT:GQ:DP        0|1:100:26      0|0:59:19       0|0:100:58
+16     76147069        rs370256        C       T       .       PASS    AA=C;DP=116     GT:GQ:DP        0|1:100:26      0|0:59:19       0|0:100:69
+6      110866519       .       C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        0|1:100:26      0|0:59:19       0|0:100:72
+2      18698425        rs12619250      G       A       .       PASS    AA=A;DP=117     GT:GQ:DP        0|1:100:26      0|0:59:19       0|0:100:73
+12     62616506        rs10878094      G       C       .       PASS    AA=G;DP=121     GT:GQ:DP        0|1:100:26      0|0:59:19       0|0:100:76
+22     48222769        rs5770437       C       T       .       PASS    AA=C;DP=118     GT:GQ:DP        0|1:100:26      0|0:59:19       0|0:90:30
+4      69752891        rs7668117       C       T       .       PASS    AA=N;DP=104     GT:GQ:DP        0|1:100:26      0|0:59:20       0|0:100:39
+3      166586012       rs56745252      C       T       .       PASS    AA=T;DP=111     GT:GQ:DP        0|1:100:26      0|0:59:21       0|0:100:44
+1      12018108        rs1208992       G       A       .       PASS    AA=G;DP=111     GT:GQ:DP        0|1:100:26      0|0:59:21       0|0:100:65
+14     53244046        rs210351        G       T       .       PASS    AA=T;DP=141     GT:GQ:DP        0|1:100:26      0|0:59:29       0|0:100:90
+1      15765925        rs927206        C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        0|1:100:26      0|0:60:24       0|0:100:69
+3      22091917        rs17010726      C       A       .       PASS    AA=C;DP=118     GT:GQ:DP        0|1:100:26      0|0:60:25       0|0:100:71
+20     33547166        .       T       G       .       PASS    AA=T;DP=159     GT:GQ:DP        0|1:100:26      0|0:60:29       0|0:100:45
+2      212675529       rs13025159      G       A       .       PASS    AA=G;DP=89      GT:GQ:DP        0|1:100:26      0|0:62:19       0|0:100:42
+13     23832405        .       C       T       .       PASS    AA=C;DP=139     GT:GQ:DP        0|1:100:26      0|0:62:19       0|0:100:49
+22     22437608        rs61160578      G       A       .       PASS    AA=G;DP=158     GT:GQ:DP        0|1:100:26      0|0:62:19       0|0:100:50
+8      56815756        .       T       C       .       PASS    AA=T;DP=96      GT:GQ:DP        0|1:100:26      0|0:62:19       0|0:100:53
+4      84790299        rs13115860      C       T       .       PASS    AA=c;DP=98      GT:GQ:DP        0|1:100:26      0|0:62:19       0|0:100:54
+17     9907785 rs8074756       C       G       .       PASS    AA=C;DP=144     GT:GQ:DP        0|1:100:26      0|0:62:19       0|0:100:57
+1      73816209        rs11210290      G       A       .       PASS    AA=G;DP=102;HM2 GT:GQ:DP        0|1:100:26      0|0:62:19       0|0:100:58
+18     43408445        rs7233327       T       C       .       PASS    AA=T;DP=113     GT:GQ:DP        0|1:100:26      0|0:62:19       0|0:100:65
+12     112824736       .       A       G       .       PASS    AA=A;DP=113     GT:GQ:DP        0|1:100:26      0|0:62:19       0|0:100:68
+11     122920557       rs2673332       C       A       .       PASS    AA=C;DP=113     GT:GQ:DP        0|1:100:26      0|0:62:19       0|0:100:69
+8      82220632        .       A       G       .       PASS    AA=A;DP=118     GT:GQ:DP        0|1:100:26      0|0:62:19       0|0:100:73
+1      22897087        .       G       A       .       PASS    AA=G;DP=122     GT:GQ:DP        0|1:100:26      0|0:62:19       0|0:100:75
+12     6379286 .       G       C       .       PASS    AA=g;DP=107     GT:GQ:DP        0|1:100:26      0|0:62:20       0|0:100:61
+20     807147  rs11906355      G       T       .       PASS    AA=G;DP=126     GT:GQ:DP        0|1:100:26      0|0:62:20       0|0:100:81
+3      181146838       .       C       G       .       PASS    AA=C;DP=116     GT:GQ:DP        0|1:100:26      0|0:62:21       0|0:100:68
+6      124717244       rs17051695      G       A       .       PASS    AA=G;DP=117     GT:GQ:DP        0|1:100:26      0|0:63:25       0|0:100:66
+10     74334263        .       G       T       .       PASS    AA=G;DP=121     GT:GQ:DP        0|1:100:26      0|0:63:26       0|0:100:71
+2      65709673        rs11897462      T       A       .       PASS    AA=T;DP=137     GT:GQ:DP        0|1:100:26      0|0:63:31       0|0:100:80
+11     106428809       rs10789562      T       C       .       PASS    AA=T;DP=132     GT:GQ:DP        0|1:100:26      0|0:65:20       0|0:100:38
+2      216433407       .       C       T       .       PASS    AA=C;DP=106     GT:GQ:DP        0|1:100:26      0|0:65:20       0|0:100:59
+6      38171941        .       C       T       .       PASS    AA=C;DP=105     GT:GQ:DP        0|1:100:26      0|0:65:20       0|0:100:60
+7      130962081       rs752890        C       T       .       PASS    AA=C;DP=109     GT:GQ:DP        0|1:100:26      0|0:65:20       0|0:100:62
+9      27905481        rs10812690      A       G       .       PASS    AA=A;DP=123     GT:GQ:DP        0|1:100:26      0|0:65:20       0|0:100:65
+18     53096858        rs7242031       A       G       .       PASS    AA=A;DP=112     GT:GQ:DP        0|1:100:26      0|0:65:20       0|0:100:66
+2      202370144       .       C       A       .       PASS    AA=C;DP=116     GT:GQ:DP        0|1:100:26      0|0:65:20       0|0:100:69
+11     100983224       rs1939462       C       G       .       PASS    AA=G;DP=113     GT:GQ:DP        0|1:100:26      0|0:65:20       0|0:100:71
+10     33653854        .       C       T       .       PASS    AA=C;DP=118     GT:GQ:DP        0|1:100:26      0|0:65:20       0|0:100:74
+1      93708199        .       T       C       .       PASS    AA=T;DP=126     GT:GQ:DP        0|1:100:26      0|0:65:20       0|0:100:82
+3      37382493        rs17266090      A       G       .       PASS    AA=G;DP=98      GT:GQ:DP        0|1:100:26      0|0:65:20       0|0:92:37
+12     24021033        .       A       G       .       PASS    AA=-;DP=93      GT:GQ:DP        0|1:100:26      0|0:65:21       0|0:100:37
+4      47657937        .       C       T       .       PASS    AA=C;DP=99      GT:GQ:DP        0|1:100:26      0|0:65:21       0|0:100:52
+12     47138788        .       T       G       .       PASS    AA=.;DP=118     GT:GQ:DP        0|1:100:26      0|0:65:21       0|0:100:71
+4      165316739       rs58838435      G       A       .       PASS    AA=G;DP=129     GT:GQ:DP        0|1:100:26      0|0:65:21       0|0:100:71
+7      137449179       .       C       T       .       PASS    AA=C;DP=114     GT:GQ:DP        0|1:100:26      0|0:65:23       0|0:100:63
+12     30318786        rs11050787      G       A       .       PASS    AA=G;DP=103     GT:GQ:DP        0|1:100:26      0|0:67:26       0|0:100:52
+12     11828847        .       C       T       .       PASS    AA=c;DP=124     GT:GQ:DP        0|1:100:26      0|0:68:21       0|0:100:80
+6      55148655        rs10456181      G       A       .       PASS    AA=G;DP=130     GT:GQ:DP        0|1:100:26      0|0:68:21       0|0:100:86
+5      18083649        rs58208389      G       A       .       PASS    AA=-;DP=86      GT:GQ:DP        0|1:100:26      0|0:68:21       0|0:84:28
+3      11916779        .       A       G       .       PASS    AA=.;DP=143     GT:GQ:DP        0|1:100:26      0|0:68:22       0|0:100:51
+13     108935145       rs11620131      G       T       .       PASS    AA=G;DP=110     GT:GQ:DP        0|1:100:26      0|0:68:22       0|0:100:57
+9      125890965       .       G       A       .       PASS    AA=g;DP=105     GT:GQ:DP        0|1:100:26      0|0:68:22       0|0:100:58
+20     35285900        rs6104134       A       G       .       PASS    AA=G;DP=134     GT:GQ:DP        0|1:100:26      0|0:68:22       0|0:100:84
+9      136817627       .       G       A       .       PASS    AA=g;DP=135     GT:GQ:DP        0|1:100:26      0|0:68:23       0|0:100:83
+4      58213812        .       C       T       .       PASS    AA=C;DP=140     GT:GQ:DP        0|1:100:26      0|0:70:27       0|0:100:91
+2      182778151       .       T       C       .       PASS    AA=T;DP=104     GT:GQ:DP        0|1:100:26      0|0:71:22       0|0:100:55
+1      49199203        rs11205578      A       C       .       PASS    AA=C;DP=111;HM2 GT:GQ:DP        0|1:100:26      0|0:71:22       0|0:100:62
+4      121321127       rs12646798      G       A       .       PASS    AA=A;DP=113     GT:GQ:DP        0|1:100:26      0|0:71:22       0|0:100:64
+6      148086890       .       A       G       .       PASS    AA=A;DP=111     GT:GQ:DP        0|1:100:26      0|0:71:22       0|0:100:65
+2      189020469       .       G       A       .       PASS    AA=G;DP=114     GT:GQ:DP        0|1:100:26      0|0:71:22       0|0:100:66
+10     54479235        rs10740532      G       C       .       PASS    AA=G;DP=120     GT:GQ:DP        0|1:100:26      0|0:71:22       0|0:100:69
+5      50361984        rs10064652      G       A       .       PASS    AA=A;DP=121     GT:GQ:DP        0|1:100:26      0|0:71:22       0|0:100:74
+2      107638792       .       A       T       .       PASS    AA=A;DP=128     GT:GQ:DP        0|1:100:26      0|0:71:22       0|0:100:80
+3      100136760       rs28791895      G       T       .       PASS    AA=g;DP=126     GT:GQ:DP        0|1:100:26      0|0:71:22       0|0:100:81
+9      2367637 rs7860841       G       A       .       PASS    AA=g;DP=139     GT:GQ:DP        0|1:100:26      0|0:71:22       0|0:100:91
+10     4656506 .       C       G       .       PASS    AA=C;DP=141     GT:GQ:DP        0|1:100:26      0|0:71:22       0|0:100:94
+7      40367237        .       G       A       .       PASS    AA=G;DP=141     GT:GQ:DP        0|1:100:26      0|0:71:23       0|0:100:43
+6      169152982       rs10945357      G       A       .       PASS    AA=G;DP=93      GT:GQ:DP        0|1:100:26      0|0:71:23       0|0:100:45
+5      57253128        .       A       G       .       PASS    AA=A;DP=144     GT:GQ:DP        0|1:100:26      0|0:71:23       0|0:100:48
+1      12646734        .       G       A       .       PASS    AA=G;DP=123     GT:GQ:DP        0|1:100:26      0|0:71:23       0|0:100:74
+2      173643272       rs62175799      G       C       .       PASS    AA=G;DP=122     GT:GQ:DP        0|1:100:26      0|0:71:23       0|0:100:75
+4      176600370       rs6848908       T       C       .       PASS    AA=T;DP=123     GT:GQ:DP        0|1:100:26      0|0:71:23       0|0:100:75
+1      225783571       .       G       A       .       PASS    AA=G;DP=96      GT:GQ:DP        0|1:100:26      0|0:74:23       0|0:100:36
+1      5191056 .       G       A       .       PASS    AA=G;DP=126     GT:GQ:DP        0|1:100:26      0|0:74:23       0|0:100:36
+18     66243490        rs9959750       G       A       .       PASS    AA=G;DP=133     GT:GQ:DP        0|1:100:26      0|0:74:23       0|0:100:42
+8      71072776        rs34362838      T       C       .       PASS    AA=T;DP=92      GT:GQ:DP        0|1:100:26      0|0:74:23       0|0:100:45
+8      1154352 rs28556612      T       G       .       PASS    AA=G;DP=140     GT:GQ:DP        0|1:100:26      0|0:74:23       0|0:100:46
+11     134215568       .       G       A       .       PASS    AA=G;DP=140     GT:GQ:DP        0|1:100:26      0|0:74:23       0|0:100:48
+3      63113780        .       T       G       .       PASS    AA=T;DP=111     GT:GQ:DP        0|1:100:26      0|0:74:23       0|0:100:51
+4      140596185       rs13136715      C       T       .       PASS    AA=T;DP=148     GT:GQ:DP        0|1:100:26      0|0:74:23       0|0:100:56
+16     54035961        rs7187391       T       C       .       PASS    AA=T;DP=108     GT:GQ:DP        0|1:100:26      0|0:74:23       0|0:100:57
+8      3888458 .       A       G       .       PASS    AA=A;DP=106     GT:GQ:DP        0|1:100:26      0|0:74:23       0|0:100:59
+10     5139413 rs11252951      T       C       .       PASS    AA=t;DP=115     GT:GQ:DP        0|1:100:26      0|0:74:23       0|0:100:65
+1      162108285       rs1145531       G       A       .       PASS    AA=G;DP=118;HM2 GT:GQ:DP        0|1:100:26      0|0:74:23       0|0:100:68
+3      27553328        rs7615484       G       T       .       PASS    AA=G;DP=133     GT:GQ:DP        0|1:100:26      0|0:74:23       0|0:100:88
+15     67706062        rs62009116      A       G       .       PASS    AA=A;DP=138     GT:GQ:DP        0|1:100:26      0|0:74:23       0|0:100:89
+13     33900409        .       G       A       .       PASS    AA=G;DP=97      GT:GQ:DP        0|1:100:26      0|0:74:23       0|0:74:36
+8      39744017        .       T       C       .       PASS    AA=T;DP=125     GT:GQ:DP        0|1:100:26      0|0:74:23       0|0:79:38
+7      14525075        rs11505395      G       C       .       PASS    AA=g;DP=109     GT:GQ:DP        0|1:100:26      0|0:74:24       0|0:100:59
+3      145704265       .       A       G       .       PASS    AA=A;DP=116     GT:GQ:DP        0|1:100:26      0|0:74:24       0|0:100:64
+1      11570256        rs2817644       C       T       .       PASS    AA=C;DP=128;HM2;HM3     GT:GQ:DP        0|1:100:26      0|0:74:24       0|0:100:76
+1      227140987       rs7530636       G       A       .       PASS    AA=G;DP=130;HM3 GT:GQ:DP        0|1:100:26      0|0:74:24       0|0:100:81
+4      92347379        rs12510568      C       T       .       PASS    AA=T;DP=85      GT:GQ:DP        0|1:100:26      0|0:74:24       0|0:69:24
+2      68025347        .       C       T       .       PASS    AA=T;DP=126     GT:GQ:DP        0|1:100:26      0|0:74:26       0|0:100:75
+3      146693750       .       G       A       .       PASS    AA=G;DP=118     GT:GQ:DP        0|1:100:26      0|0:74:29       0|0:100:64
+1      91299786        rs165280        T       G       .       PASS    AA=N;DP=128     GT:GQ:DP        0|1:100:26      0|0:74:33       0|0:100:72
+14     85086089        rs1548243       A       G       .       PASS    AA=A;DP=129     GT:GQ:DP        0|1:100:26      0|0:76:30       0|0:100:72
+17     13549498        .       C       A       .       PASS    AA=C;DP=132     GT:GQ:DP        0|1:100:26      0|0:77:24       0|0:100:39
+1      214216015       rs568336        C       A       .       PASS    AA=C;DP=113     GT:GQ:DP        0|1:100:26      0|0:77:24       0|0:100:59
+5      73584459        .       G       A       .       PASS    AA=G;DP=109     GT:GQ:DP        0|1:100:26      0|0:77:24       0|0:100:59
+5      58954144        .       C       T       .       PASS    AA=C;DP=153     GT:GQ:DP        0|1:100:26      0|0:77:24       0|0:100:60
+17     11438592        rs60610896      T       C       .       PASS    AA=C;DP=114     GT:GQ:DP        0|1:100:26      0|0:77:24       0|0:100:64
+4      153193103       rs13130730      A       G       .       PASS    AA=a;DP=117     GT:GQ:DP        0|1:100:26      0|0:77:24       0|0:100:69
+3      64638496        rs4257545       A       G       .       PASS    AA=A;DP=122     GT:GQ:DP        0|1:100:26      0|0:77:24       0|0:100:74
+21     22657211        .       A       G       .       PASS    AA=a;DP=139     GT:GQ:DP        0|1:100:26      0|0:77:24       0|0:87:29
+15     29898272        .       A       G       .       PASS    AA=A;DP=151     GT:GQ:DP        0|1:100:26      0|0:77:25       0|0:100:56
+13     33825982        rs682315        G       A       .       PASS    AA=g;DP=124     GT:GQ:DP        0|1:100:26      0|0:77:25       0|0:100:71
+4      72148990        .       G       A       .       PASS    AA=G;DP=147     GT:GQ:DP        0|1:100:26      0|0:77:26       0|0:100:37
+6      88777148        .       A       G       .       PASS    AA=G;DP=126     GT:GQ:DP        0|1:100:26      0|0:77:26       0|0:100:77
+3      85539293        .       A       C       .       PASS    AA=A;DP=133     GT:GQ:DP        0|1:100:26      0|0:77:26       0|0:100:80
+3      50683560        rs9879630       C       G       .       PASS    AA=T;DP=137     GT:GQ:DP        0|1:100:26      0|0:77:26       0|0:100:87
+1      174112595       .       C       A       .       PASS    AA=C;DP=131     GT:GQ:DP        0|1:100:26      0|0:78:30       0|0:100:76
+1      5628060 .       T       C       .       PASS    AA=T;DP=129     GT:GQ:DP        0|1:100:26      0|0:7:18        0|0:86:41
+6      23380143        .       A       G       .       PASS    AA=A;DP=145     GT:GQ:DP        0|1:100:26      0|0:80:25       0|0:100:46
+18     22910696        .       C       G       .       PASS    AA=C;DP=157     GT:GQ:DP        0|1:100:26      0|0:80:25       0|0:100:55
+2      239603096       .       C       T       .       PASS    AA=C;DP=109     GT:GQ:DP        0|1:100:26      0|0:80:25       0|0:100:56
+6      81867800        rs508470        A       G       .       PASS    AA=G;DP=116     GT:GQ:DP        0|1:100:26      0|0:80:25       0|0:100:64
+7      141225684       rs10952508      T       G       .       PASS    AA=T;DP=121     GT:GQ:DP        0|1:100:26      0|0:80:25       0|0:100:75
+4      70469980        rs12649664      C       T       .       PASS    AA=T;DP=130     GT:GQ:DP        0|1:100:26      0|0:80:25       0|0:100:79
+20     41242874        .       T       C       .       PASS    AA=T;DP=132     GT:GQ:DP        0|1:100:26      0|0:80:25       0|0:100:80
+3      165940787       rs1115797       C       G       .       PASS    AA=C;DP=140     GT:GQ:DP        0|1:100:26      0|0:80:25       0|0:100:90
+3      176355860       rs4894696       A       T       .       PASS    AA=t;DP=114     GT:GQ:DP        0|1:100:26      0|0:80:26       0|0:100:59
+5      25424015        .       C       T       .       PASS    AA=C;DP=119     GT:GQ:DP        0|1:100:26      0|0:80:28       0|0:100:64
+11     84669779        .       G       A       .       PASS    AA=G;DP=130     GT:GQ:DP        0|1:100:26      0|0:82:33       0|0:100:71
+7      131107195       rs4731813       C       G       .       PASS    AA=C;DP=132     GT:GQ:DP        0|1:100:26      0|0:83:26       0|0:100:39
+15     23604551        .       T       G       .       PASS    AA=T;DP=148     GT:GQ:DP        0|1:100:26      0|0:83:26       0|0:100:44
+2      209931332       .       C       T       .       PASS    AA=C;DP=99      GT:GQ:DP        0|1:100:26      0|0:83:26       0|0:100:46
+16     81485399        .       G       T       .       PASS    AA=G;DP=123     GT:GQ:DP        0|1:100:26      0|0:83:26       0|0:100:72
+5      70917430        rs410776        C       T       .       PASS    AA=C;DP=126     GT:GQ:DP        0|1:100:26      0|0:83:26       0|0:100:74
+3      28676163        rs2126315       G       A       .       PASS    AA=G;DP=127     GT:GQ:DP        0|1:100:26      0|0:83:26       0|0:100:78
+8      33780778        rs4733457       G       A       .       PASS    AA=G;DP=147     GT:GQ:DP        0|1:100:26      0|0:83:26       0|0:100:95
+8      34356250        rs1870388       G       A       .       PASS    AA=G;DP=129     GT:GQ:DP        0|1:100:26      0|0:83:27       0|0:100:75
+5      49809362        .       T       C       .       PASS    AA=T;DP=132     GT:GQ:DP        0|1:100:26      0|0:83:27       0|0:100:80
+14     50307188        rs17122880      C       T       .       PASS    AA=C;DP=145     GT:GQ:DP        0|1:100:26      0|0:83:27       0|0:100:89
+4      131017741       rs11946629      G       A       .       PASS    AA=G;DP=99      GT:GQ:DP        0|1:100:26      0|0:83:28       0|0:100:47
+20     58317674        rs6100856       A       C       .       PASS    AA=C;DP=125     GT:GQ:DP        0|1:100:26      0|0:83:28       0|0:100:72
+16     80703184        rs11865809      C       T       .       PASS    AA=C;DP=130     GT:GQ:DP        0|1:100:26      0|0:83:28       0|0:100:76
+7      122174033       .       G       T       .       PASS    AA=G;DP=146     GT:GQ:DP        0|1:100:26      0|0:83:28       0|0:100:93
+16     63132650        rs16942766      G       A       .       PASS    AA=G;DP=113     GT:GQ:DP        0|1:100:26      0|0:83:29       0|0:100:60
+14     56703360        rs7140677       C       G       .       PASS    AA=G;DP=141     GT:GQ:DP        0|1:100:26      0|0:86:27       0|0:100:39
+19     12441183        .       G       A       .       PASS    AA=g;DP=139     GT:GQ:DP        0|1:100:26      0|0:86:27       0|0:100:44
+19     24248865        .       T       C       .       PASS    AA=.;DP=104     GT:GQ:DP        0|1:100:26      0|0:86:27       0|0:100:52
+3      170982783       .       A       T       .       PASS    AA=A;DP=112     GT:GQ:DP        0|1:100:26      0|0:86:27       0|0:100:60
+8      78853392        rs6993840       A       G       .       PASS    AA=A;DP=115     GT:GQ:DP        0|1:100:26      0|0:86:27       0|0:100:62
+4      26480610        .       A       G       .       PASS    AA=A;DP=131     GT:GQ:DP        0|1:100:26      0|0:86:27       0|0:100:74
+5      96171180        rs28050 A       G       .       PASS    AA=A;DP=133     GT:GQ:DP        0|1:100:26      0|0:86:27       0|0:100:77
+2      144502340       .       G       C       .       PASS    AA=G;DP=130     GT:GQ:DP        0|1:100:26      0|0:86:27       0|0:100:78
+10     52606714        rs9415775       C       T       .       PASS    AA=c;DP=122     GT:GQ:DP        0|1:100:26      0|0:86:28       0|0:100:67
+1      185380840       rs12026814      C       T       .       PASS    AA=C;DP=147     GT:GQ:DP        0|1:100:26      0|0:86:29       0|0:100:49
+1      202604810       rs6691293       T       C       .       PASS    AA=T;DP=150;HM2;HM3     GT:GQ:DP        0|1:100:26      0|0:86:29       0|0:100:54
+5      142902280       rs4635964       A       G       .       PASS    AA=G;DP=116     GT:GQ:DP        0|1:100:26      0|0:86:29       0|0:100:57
+3      59586399        rs1394592       A       C       .       PASS    AA=A;DP=142     GT:GQ:DP        0|1:100:26      0|0:86:33       0|0:100:81
+9      32257867        rs1537156       G       A       .       PASS    AA=G;DP=132     GT:GQ:DP        0|1:100:26      0|0:87:33       0|0:100:76
+8      23002789        rs58861592      A       G       .       PASS    AA=A;DP=101     GT:GQ:DP        0|1:100:26      0|0:89:28       0|0:100:38
+9      121562965       .       A       T       .       PASS    AA=A;DP=158     GT:GQ:DP        0|1:100:26      0|0:89:28       0|0:100:53
+4      12533360        .       A       C       .       PASS    AA=A;DP=128     GT:GQ:DP        0|1:100:26      0|0:89:28       0|0:100:57
+11     106122700       rs12421303      C       T       .       PASS    AA=C;DP=117     GT:GQ:DP        0|1:100:26      0|0:89:28       0|0:100:61
+7      41406792        .       A       G       .       PASS    AA=A;DP=159     GT:GQ:DP        0|1:100:26      0|0:89:29       0|0:100:51
+19     34773295        rs4805438       C       T       .       PASS    AA=C;DP=157     GT:GQ:DP        0|1:100:26      0|0:89:29       0|0:100:57
+8      136612160       rs12550226      A       G       .       PASS    AA=A;DP=134     GT:GQ:DP        0|1:100:26      0|0:89:29       0|0:100:68
+X      886685  .       G       C       .       PASS    AA=.;DP=97      GT:GQ:DP        0|1:100:26      0|0:89:30       0|0:100:37
+1      172025940       rs9425737       C       G       .       PASS    AA=C;DP=138;HM2;HM3     GT:GQ:DP        0|1:100:26      0|0:89:30       0|0:100:82
+17     59489416        .       A       G       .       PASS    AA=A;DP=146     GT:GQ:DP        0|1:100:26      0|0:89:31       0|0:100:42
+14     53288571        .       C       A       .       PASS    AA=C;DP=123     GT:GQ:DP        0|1:100:26      0|0:92:29       0|0:100:70
+1      7915202 rs863171        C       T       .       PASS    AA=C;DP=129;HM2;HM3     GT:GQ:DP        0|1:100:26      0|0:92:29       0|0:100:77
+4      6059052 .       A       C       .       PASS    AA=a;DP=134     GT:GQ:DP        0|1:100:26      0|0:92:29       0|0:100:81
+9      121474313       rs7866414       T       C       .       PASS    AA=C;DP=153     GT:GQ:DP        0|1:100:26      0|0:92:30       0|0:100:54
+2      211035100       rs7578688       A       T       .       PASS    AA=a;DP=117     GT:GQ:DP        0|1:100:26      0|0:92:30       0|0:100:61
+20     18995170        .       C       T       .       PASS    AA=C;DP=150     GT:GQ:DP        0|1:100:26      0|0:92:30       0|0:100:95
+3      64769144        rs9832280       T       C       .       PASS    AA=T;DP=143     GT:GQ:DP        0|1:100:26      0|0:92:31       0|0:100:43
+11     85808433        rs7932664       T       C       .       PASS    AA=C;DP=129     GT:GQ:DP        0|1:100:26      0|0:94:31       0|0:100:67
+5      35987782        .       C       A       .       PASS    AA=C;DP=116     GT:GQ:DP        0|1:100:26      0|0:95:30       0|0:100:61
+3      172035523       .       A       G       .       PASS    AA=A;DP=123     GT:GQ:DP        0|1:100:26      0|0:95:30       0|0:100:67
+8      109852037       .       G       A       .       PASS    AA=G;DP=109     GT:GQ:DP        0|1:100:26      0|0:95:31       0|0:100:54
+1      174831981       .       G       A       .       PASS    AA=G;DP=132     GT:GQ:DP        0|1:100:26      0|0:95:34       0|0:100:72
+1      60826699        rs12094280      A       T       .       PASS    AA=a;DP=124;HM2 GT:GQ:DP        0|1:100:26      0|0:98:31       0|0:100:67
+17     65835930        rs312688        C       T       .       PASS    AA=C;DP=141     GT:GQ:DP        0|1:100:26      0|0:98:32       0|0:100:46
+1      102206332       .       A       T       .       PASS    AA=a;DP=128     GT:GQ:DP        0|1:100:26      0|0:98:32       0|0:100:70
+9      118842996       rs7023984       G       C       .       PASS    AA=C;DP=110     GT:GQ:DP        0|1:100:26      0|1:100:15      0|0:100:71
+21     40510606        rs56085764      C       A       .       PASS    AA=C;DP=110     GT:GQ:DP        0|1:100:26      0|1:100:16      0|0:100:67
+4      47109166        rs7690580       A       G       .       PASS    AA=A;DP=84      GT:GQ:DP        0|1:100:26      0|1:100:17      0|0:100:41
+2      18282024        .       G       A       .       PASS    AA=G;DP=117     GT:GQ:DP        0|1:100:26      0|1:100:17      0|0:100:77
+13     69753374        rs1341525       G       A       .       PASS    AA=G;DP=116     GT:GQ:DP        0|1:100:26      0|1:100:17      0|0:96:33
+2      126120537       rs6738779       T       C       .       PASS    AA=N;DP=92      GT:GQ:DP        0|1:100:26      0|1:100:18      0|0:100:51
+9      95690728        rs10739963      G       A       .       PASS    AA=A;DP=117     GT:GQ:DP        0|1:100:26      0|1:100:19      0|0:100:74
+20     50210433        rs3818198       A       G       .       PASS    AA=G;DP=131     GT:GQ:DP        0|1:100:26      0|1:100:19      0|0:100:86
+5      32719515        .       T       C       .       PASS    AA=T;DP=113     GT:GQ:DP        0|1:100:26      0|1:100:20      0|0:100:68
+13     24249436        rs11149212      A       C       .       PASS    AA=A;DP=99      GT:GQ:DP        0|1:100:26      0|1:100:21      0|0:100:52
+16     78890067        rs11150267      G       A       .       PASS    AA=G;DP=110     GT:GQ:DP        0|1:100:26      0|1:100:21      0|0:100:63
+16     3639823 rs3751841       G       T       .       PASS    AA=G;DP=114     GT:GQ:DP        0|1:100:26      0|1:100:21      0|0:100:68
+12     41793711        rs1865619       A       C       .       PASS    AA=C;DP=105     GT:GQ:DP        0|1:100:26      0|1:100:22      0|0:100:57
+17     39869785        rs4793105       G       A       .       PASS    AA=A;DP=114     GT:GQ:DP        0|1:100:26      0|1:100:22      0|0:100:66
+3      153192421       rs7647632       A       C       .       PASS    AA=N;DP=126     GT:GQ:DP        0|1:100:26      0|1:100:22      0|0:100:79
+20     967321  rs3891330       C       T       .       PASS    AA=C;DP=103     GT:GQ:DP        0|1:100:26      0|1:100:23      0|0:100:54
+18     2590257 rs3786407       T       A       .       PASS    AA=T;DP=111     GT:GQ:DP        0|1:100:26      0|1:100:23      0|0:100:63
+12     127532056       rs55916854      G       A       .       PASS    AA=A;DP=120     GT:GQ:DP        0|1:100:26      0|1:100:23      0|0:100:69
+11     20834598        rs1946513       A       G       .       PASS    AA=G;DP=134     GT:GQ:DP        0|1:100:26      0|1:100:23      0|0:100:84
+10     76265695        rs11812996      A       G       .       PASS    AA=A;DP=93      GT:GQ:DP        0|1:100:26      0|1:100:23      0|0:93:32
+5      61593929        rs3846466       T       C       .       PASS    AA=C;DP=134     GT:GQ:DP        0|1:100:26      0|1:100:24      0|0:100:37
+3      156015583       rs12630413      T       C       .       PASS    AA=C;DP=98      GT:GQ:DP        0|1:100:26      0|1:100:24      0|0:100:41
+4      124619446       rs737009        G       A       .       PASS    AA=G;DP=133     GT:GQ:DP        0|1:100:26      0|1:100:25      0|0:100:76
+2      225925397       rs2197277       C       T       .       PASS    AA=C;DP=114     GT:GQ:DP        0|1:100:26      0|1:100:27      0|0:100:61
+8      56476889        .       G       A       .       PASS    AA=G;DP=121     GT:GQ:DP        0|1:100:26      0|1:100:27      0|0:100:67
+3      74079582        rs6792155       A       G       .       PASS    AA=G;DP=114     GT:GQ:DP        0|1:100:26      0|1:100:28      0|0:100:63
+15     84144359        rs6496234       A       T       .       PASS    AA=A;DP=144     GT:GQ:DP        0|1:100:26      0|1:100:30      0|0:100:47
+5      87739760        rs12651891      T       C       .       PASS    AA=C;DP=119     GT:GQ:DP        0|1:100:26      0|1:100:30      0|0:100:63
+8      14608477        rs17116192      C       G       .       PASS    AA=C;DP=127     GT:GQ:DP        0|1:100:26      0|1:100:30      0|0:100:71
+8      2692585 rs12543783      A       G       .       PASS    AA=G;DP=147     GT:GQ:DP        0|1:100:26      0|1:100:31      0|0:100:88
+8      3236059 rs1979830       C       T       .       PASS    AA=T;DP=138     GT:GQ:DP        0|1:100:26      0|1:100:32      0|0:100:84
+1      163387981       .       A       T       .       PASS    AA=A;DP=134     GT:GQ:DP        0|1:100:26      0|1:100:34      0|0:100:77
+4      41489170        rs60955421      A       C       .       PASS    AA=C;DP=135     GT:GQ:DP        0|1:100:26      0|1:100:34      0|0:100:77
+16     81352714        rs8046812       C       G       .       PASS    AA=G;DP=139     GT:GQ:DP        0|1:100:26      0|1:100:34      0|0:100:79
+11     117593051       rs7939622       G       A       .       PASS    AA=G;DP=123     GT:GQ:DP        0|1:100:26      0|1:100:35      0|0:100:62
+8      53450673        rs11774473      C       T       .       PASS    AA=C;DP=153     GT:GQ:DP        0|1:100:26      0|1:100:36      0|0:98:40
+5      61030968        rs2950221       G       A       .       PASS    AA=G;DP=104     GT:GQ:DP        0|1:100:26      0|1:10:11       0|0:100:70
+6      69908207        rs314221        A       G       .       PASS    AA=-;DP=94      GT:GQ:DP        0|1:100:26      0|1:20:13       0|0:100:54
+9      123351634       .       T       G       .       PASS    AA=t;DP=84      GT:GQ:DP        0|1:100:26      0|1:22:18       0|0:100:36
+19     38912333        rs284682        G       A       .       PASS    AA=G;DP=98      GT:GQ:DP        0|1:100:26      0|1:37:12       0|0:100:61
+3      34613101        .       T       C       .       PASS    AA=T;DP=116     GT:GQ:DP        0|1:100:26      0|1:38:15       0|0:100:76
+6      170197357       rs55849477      C       G       .       PASS    AA=C;DP=117     GT:GQ:DP        0|1:100:26      0|1:43:19       0|0:100:72
+19     61015021        rs12610400      T       C       .       PASS    AA=T;DP=116     GT:GQ:DP        0|1:100:26      0|1:49:24       0|0:100:67
+3      112819848       rs6765832       T       C       .       PASS    AA=C;DP=140     GT:GQ:DP        0|1:100:26      0|1:50:20       0|0:100:46
+18     45714548        rs1787325       T       C       .       PASS    AA=C;DP=120     GT:GQ:DP        0|1:100:26      0|1:50:20       0|0:100:74
+6      63330423        rs17383706      A       C       .       PASS    AA=A;DP=107     GT:GQ:DP        0|1:100:26      0|1:56:13       0|0:78:27
+4      175798527       rs6849459       A       G       .       PASS    AA=A;DP=77      GT:GQ:DP        0|1:100:26      0|1:58:8        0|0:100:42
+1      87519570        rs4628480       C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        0|1:100:26      0|1:60:19       0|0:100:65
+15     57936520        rs17237068      G       A       .       PASS    AA=A;DP=122     GT:GQ:DP        0|1:100:26      0|1:71:21       0|0:100:66
+13     58200947        rs7491665       A       T       .       PASS    AA=T;DP=77      GT:GQ:DP        0|1:100:26      0|1:72:15       0|0:100:39
+6      165633951       rs510579        A       C       .       PASS    AA=A;DP=80      GT:GQ:DP        0|1:100:26      0|1:73:19       0|0:61:28
+2      57906625        .       G       A       .       PASS    AA=G;DP=111     GT:GQ:DP        0|1:100:26      0|1:79:15       0|0:100:68
+5      119484220       rs11950206      G       C       .       PASS    AA=G;DP=109     GT:GQ:DP        0|1:100:26      0|1:79:17       0|0:100:65
+4      185409999       rs2703732       T       G       .       PASS    AA=T;DP=113     GT:GQ:DP        0|1:100:26      0|1:81:18       0|0:100:69
+3      153257342       rs2681498       G       C       .       PASS    AA=G;DP=134     GT:GQ:DP        0|1:100:26      0|1:81:23       0|0:100:84
+1      77096114        rs11162228      T       C       .       PASS    AA=T;DP=121;HM2 GT:GQ:DP        0|1:100:26      0|1:82:27       0|0:100:69
+1      55290748        rs11806638      C       A       .       PASS    AA=A;DP=117     GT:GQ:DP        0|1:100:26      0|1:86:15       0|0:100:75
+18     5056755 rs1995452       G       A       .       PASS    AA=A;DP=109     GT:GQ:DP        0|1:100:26      0|1:91:18       0|0:100:65
+15     92861083        rs6496018       C       T       .       PASS    AA=T;DP=126     GT:GQ:DP        0|1:100:26      0|1:93:34       0|0:100:66
+2      223885394       rs12694605      T       C       .       PASS    AA=T;DP=129     GT:GQ:DP        0|1:100:26      0|1:94:26       0|0:100:77
+18     53416157        rs12954801      A       G       .       PASS    AA=G;DP=118     GT:GQ:DP        0|1:100:26      0|1:96:11       0|0:100:38
+1      106406891       .       G       A       .       PASS    AA=G;DP=116     GT:GQ:DP        0|1:100:26      0|1:99:14       0|0:93:32
+13     65119754        rs2875447       A       G       .       PASS    AA=A;DP=124     GT:GQ:DP        0|1:100:26      1|1:100:42      0|1:100:54
+11     23931415        rs4244511       A       C       .       PASS    AA=.;DP=92      GT:GQ:DP        0|1:100:26      1|1:11:16       0|1:100:36
+5      172930940       rs958138        C       A       .       PASS    AA=A;DP=115     GT:GQ:DP        0|1:100:26      1|1:14:15       0|1:100:72
+2      79923340        rs4852533       G       T       .       PASS    AA=g;DP=104     GT:GQ:DP        0|1:100:26      1|1:18:22       0|1:100:54
+7      70409373        rs6460649       A       G       .       PASS    AA=A;DP=112     GT:GQ:DP        0|1:100:26      1|1:21:19       0|1:100:69
+1      110291551       rs11102037      G       C       .       PASS    AA=C;DP=98      GT:GQ:DP        0|1:100:26      1|1:21:21       0|1:100:52
+4      151247649       rs13130447      G       A       .       PASS    AA=G;DP=107     GT:GQ:DP        0|1:100:26      1|1:27:21       0|1:100:62
+11     114339091       rs11605036      C       G       .       PASS    AA=G;DP=124     GT:GQ:DP        0|1:100:26      1|1:27:21       0|1:100:80
+5      114103138       rs287656        T       G       .       PASS    AA=T;DP=95      GT:GQ:DP        0|1:100:26      1|1:30:11       0|1:100:56
+12     76413984        rs1491047       T       G       .       PASS    AA=T;DP=129     GT:GQ:DP        0|1:100:26      1|1:30:22       0|1:100:39
+15     21431644        rs10873634      G       A       .       PASS    AA=A;DP=84      GT:GQ:DP        0|1:100:26      1|1:33:12       0|1:100:47
+3      58736474        rs9864200       C       T       .       PASS    AA=c;DP=98      GT:GQ:DP        0|1:100:26      1|1:33:12       0|1:100:59
+13     66042861        rs57962321      A       G       .       PASS    AA=G;DP=125     GT:GQ:DP        0|1:100:26      1|1:35:24       0|1:100:28
+2      193074733       rs10176810      C       T       .       PASS    AA=T;DP=115     GT:GQ:DP        0|1:100:26      1|1:36:14       0|1:100:76
+20     58886513        rs6015876       C       T       .       PASS    AA=C;DP=122     GT:GQ:DP        0|1:100:26      1|1:36:22       0|1:100:78
+17     31320238        rs1635283       A       G       .       PASS    AA=G;DP=109     GT:GQ:DP        0|1:100:26      1|1:38:20       0|1:100:63
+2      1136552 .       T       C       .       PASS    AA=C;DP=88      GT:GQ:DP        0|1:100:26      1|1:39:14       0|1:100:40
+11     90589369        rs4601726       C       A       .       PASS    AA=a;DP=83      GT:GQ:DP        0|1:100:26      1|1:39:14       0|1:100:41
+6      53729855        rs9474649       G       A       .       PASS    AA=A;DP=97      GT:GQ:DP        0|1:100:26      1|1:39:14       0|1:100:57
+4      67823932        rs2083498       A       C       .       PASS    AA=C;DP=104     GT:GQ:DP        0|1:100:26      1|1:42:15       0|1:100:63
+5      96043822        rs28040 C       G       .       PASS    AA=G;DP=108     GT:GQ:DP        0|1:100:26      1|1:42:15       0|1:100:67
+7      17541538        rs1448653       G       A       .       PASS    AA=A;DP=105     GT:GQ:DP        0|1:100:26      1|1:44:24       0|1:100:56
+12     7211545 rs1450961       C       T       .       PASS    AA=T;DP=90      GT:GQ:DP        0|1:100:26      1|1:45:17       0|1:100:46
+4      31894903        rs2045102       G       T       .       PASS    AA=T;DP=107     GT:GQ:DP        0|1:100:26      1|1:48:18       0|1:100:61
+4      20720936        rs7696822       G       T       .       PASS    AA=G;DP=100     GT:GQ:DP        0|1:100:26      1|1:48:19       0|1:100:57
+6      74971987        rs2781217       G       C       .       PASS    AA=N;DP=97      GT:GQ:DP        0|1:100:26      1|1:51:18       0|1:100:53
+2      18121717        rs11887814      A       C       .       PASS    AA=A;DP=114     GT:GQ:DP        0|1:100:26      1|1:51:18       0|1:100:70
+16     48260897        rs12924119      C       T       .       PASS    AA=T;DP=121     GT:GQ:DP        0|1:100:26      1|1:51:19       0|1:100:78
+14     90327528        rs1286341       C       T       .       PASS    AA=T;DP=129     GT:GQ:DP        0|1:100:26      1|1:51:20       0|1:100:84
+6      133045974       rs61729583      A       G       .       PASS    AA=A;DP=108     GT:GQ:DP        0|1:100:26      1|1:54:20       0|1:100:62
+16     24847233        rs8064073       C       T       .       PASS    AA=C;DP=105     GT:GQ:DP        0|1:100:26      1|1:54:21       0|1:100:58
+2      82468527        rs11887253      C       A       .       PASS    AA=A;DP=108     GT:GQ:DP        0|1:100:26      1|1:56:27       0|1:100:55
+11     59855801        rs4939338       T       C       .       PASS    AA=C;DP=100     GT:GQ:DP        0|1:100:26      1|1:57:22       0|1:100:52
+2      126837363       rs360385        A       G       .       PASS    AA=A;DP=120     GT:GQ:DP        0|1:100:26      1|1:59:26       0|1:100:69
+5      114954320       rs419939        T       C       .       PASS    AA=T;DP=103     GT:GQ:DP        0|1:100:26      1|1:60:21       0|1:100:57
+3      59946908        rs2630192       T       C       .       PASS    AA=C;DP=120     GT:GQ:DP        0|1:100:26      1|1:60:21       0|1:100:73
+8      136875087       rs4388481       G       C       .       PASS    AA=C;DP=137     GT:GQ:DP        0|1:100:26      1|1:60:22       0|1:98:46
+2      107451238       rs12986835      C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        0|1:100:26      1|1:60:24       0|1:100:68
+17     25299831        .       G       A       .       PASS    AA=G;DP=137     GT:GQ:DP        0|1:100:26      1|1:63:22       0|1:100:33
+16     75451488        rs4527032       G       A       .       PASS    AA=A;DP=119     GT:GQ:DP        0|1:100:26      1|1:63:22       0|1:100:69
+16     82049393        rs8060645       C       T       .       PASS    AA=T;DP=127     GT:GQ:DP        0|1:100:26      1|1:63:22       0|1:100:82
+20     60445091        rs2427342       C       G       .       PASS    AA=G;DP=130     GT:GQ:DP        0|1:100:26      1|1:63:25       0|1:100:79
+7      94971952        rs2074125       C       T       .       PASS    AA=T;DP=134     GT:GQ:DP        0|1:100:26      1|1:66:23       0|1:100:88
+6      36409477        rs11965340      G       A       .       PASS    AA=A;DP=140     GT:GQ:DP        0|1:100:26      1|1:69:24       0|1:100:48
+2      64247937        rs35573827      C       G       .       PASS    AA=C;DP=124     GT:GQ:DP        0|1:100:26      1|1:69:24       0|1:100:75
+10     74016787        rs7923315       T       C       .       PASS    AA=C;DP=127     GT:GQ:DP        0|1:100:26      1|1:69:24       0|1:100:81
+4      134012881       rs2419694       C       G       .       PASS    AA=C;DP=138     GT:GQ:DP        0|1:100:26      1|1:72:25       0|1:100:47
+5      31215485        rs10075707      G       A       .       PASS    AA=G;DP=111     GT:GQ:DP        0|1:100:26      1|1:72:25       0|1:100:62
+13     30999358        rs487097        T       A       .       PASS    AA=T;DP=117     GT:GQ:DP        0|1:100:26      1|1:72:25       0|1:100:68
+4      20658889        rs7684200       G       A       .       PASS    AA=A;DP=124     GT:GQ:DP        0|1:100:26      1|1:72:25       0|1:100:73
+2      225459537       rs2304334       A       G       .       PASS    AA=G;DP=131     GT:GQ:DP        0|1:100:26      1|1:72:26       0|1:100:40
+15     31264514        rs16966391      C       T       .       PASS    AA=T;DP=118     GT:GQ:DP        0|1:100:26      1|1:75:26       0|1:100:67
+11     125460780       rs4935957       C       T       .       PASS    AA=T;DP=121     GT:GQ:DP        0|1:100:26      1|1:78:27       0|1:100:68
+13     48795816        rs7335804       G       A       .       PASS    AA=G;DP=145     GT:GQ:DP        0|1:100:26      1|1:81:28       0|1:100:87
+16     77278732        rs2738634       C       G       .       PASS    AA=G;DP=118     GT:GQ:DP        0|1:100:26      1|1:84:32       0|1:100:61
+11     132269186       rs11223268      T       C       .       PASS    AA=T;DP=118     GT:GQ:DP        0|1:100:26      1|1:99:34       0|1:100:62
+6      62736277        rs10484623      G       A       .       PASS    AA=G;DP=131     GT:GQ:DP        0|1:100:26      1|1:99:34       0|1:100:68
+9      19985002        .       G       C       .       PASS    AA=G;DP=124     GT:GQ:DP        0|1:100:27      0|0:100:32      0|0:100:59
+6      166477049       rs13362777      C       T       .       PASS    AA=C;DP=141     GT:GQ:DP        0|1:100:27      0|0:100:32      0|0:100:82
+5      53748943        rs7724925       A       G       .       PASS    AA=a;DP=146     GT:GQ:DP        0|1:100:27      0|0:100:32      0|0:100:86
+3      21739360        rs6783774       C       G       .       PASS    AA=C;DP=152     GT:GQ:DP        0|1:100:27      0|0:100:32      0|0:100:94
+11     19100126        .       C       G       .       PASS    AA=C;DP=165     GT:GQ:DP        0|1:100:27      0|0:100:33      0|0:100:43
+4      24336811        rs28427080      C       T       .       PASS    AA=T;DP=125     GT:GQ:DP        0|1:100:27      0|0:100:33      0|0:100:66
+15     33627325        .       G       A       .       PASS    AA=G;DP=129     GT:GQ:DP        0|1:100:27      0|0:100:33      0|0:100:68
+6      32855601        .       C       T       .       PASS    AA=N;DP=133     GT:GQ:DP        0|1:100:27      0|0:100:33      0|0:100:72
+15     52185485        rs9788641       G       C       .       PASS    AA=G;DP=139     GT:GQ:DP        0|1:100:27      0|0:100:33      0|0:100:81
+16     69153875        rs7199043       C       T       .       PASS    AA=C;DP=165     GT:GQ:DP        0|1:100:27      0|0:100:34      0|0:100:53
+2      242620145       rs59835373      C       T       .       PASS    AA=.;DP=133     GT:GQ:DP        0|1:100:27      0|0:100:34      0|0:100:72
+8      96498587        .       A       T       .       PASS    AA=A;DP=132     GT:GQ:DP        0|1:100:27      0|0:100:34      0|0:100:75
+8      27809607        rs7817722       A       G       .       PASS    AA=A;DP=171     GT:GQ:DP        0|1:100:27      0|0:100:36      0|0:100:55
+8      81707357        .       A       C       .       PASS    AA=A;DP=137     GT:GQ:DP        0|1:100:27      0|0:100:36      0|0:100:75
+17     71699669        .       G       A       .       PASS    AA=g;DP=114     GT:GQ:DP        0|1:100:27      0|0:100:37      0|0:100:53
+2      228701094       rs6734166       T       C       .       PASS    AA=t;DP=120     GT:GQ:DP        0|1:100:27      0|0:100:37      0|0:100:57
+16     9428190 .       A       G       .       PASS    AA=A;DP=114     GT:GQ:DP        0|1:100:27      0|0:100:39      0|0:100:37
+9      27085072        rs2782434       C       T       .       PASS    AA=C;DP=163     GT:GQ:DP        0|1:100:27      0|0:100:40      0|0:100:94
+4      137522557       .       T       C       .       PASS    AA=T;DP=153     GT:GQ:DP        0|1:100:27      0|0:100:41      0|0:100:84
+10     44594024        rs12268438      C       T       .       PASS    AA=T;DP=101     GT:GQ:DP        0|1:100:27      0|0:13:12       0|0:100:64
+10     42755124        rs61843440      G       A       .       PASS    AA=G;DP=110     GT:GQ:DP        0|1:100:27      0|0:14:13       0|0:100:74
+16     1705233 rs12930313      A       G       .       PASS    AA=G;DP=106     GT:GQ:DP        0|1:100:27      0|0:18:15       0|0:100:63
+9      9023781 rs324462        A       C       .       PASS    AA=A;DP=113     GT:GQ:DP        0|1:100:27      0|0:18:15       0|0:100:70
+10     10047332        rs10905645      G       T       .       PASS    AA=G;DP=84      GT:GQ:DP        0|1:100:27      0|0:22:16       0|0:51:28
+13     49984792        rs2286658       G       T       .       PASS    AA=G;DP=97      GT:GQ:DP        0|1:100:27      0|0:24:17       0|0:100:52
+12     127001003       rs7968464       C       T       .       PASS    AA=T;DP=110     GT:GQ:DP        0|1:100:27      0|0:24:17       0|0:100:66
+15     75660959        rs2667772       C       T       .       PASS    AA=C;DP=84      GT:GQ:DP        0|1:100:27      0|0:26:7        0|0:100:38
+16     82802275        .       A       G       .       PASS    AA=G;DP=93      GT:GQ:DP        0|1:100:27      0|0:29:10       0|0:100:47
+7      4895367 .       A       G       .       PASS    AA=A;DP=87      GT:GQ:DP        0|1:100:27      0|0:29:10       0|0:74:35
+2      229915899       .       G       A       .       PASS    AA=G;DP=114     GT:GQ:DP        0|1:100:27      0|0:29:19       0|0:100:64
+8      32737294        rs61731510      G       A       .       PASS    AA=G;DP=131     GT:GQ:DP        0|1:100:27      0|0:29:26       0|0:70:37
+6      161491336       .       T       G       .       PASS    AA=T;DP=100     GT:GQ:DP        0|1:100:27      0|0:31:21       0|0:85:40
+3      21202076        rs10212214      G       T       .       PASS    AA=T;DP=122     GT:GQ:DP        0|1:100:27      0|0:31:27       0|0:53:29
+3      27945199        .       A       G       .       PASS    AA=A;DP=94      GT:GQ:DP        0|1:100:27      0|0:32:20       0|0:100:46
+18     54044197        rs292450        C       T       .       PASS    AA=c;DP=110     GT:GQ:DP        0|1:100:27      0|0:34:16       0|0:100:68
+11     124576882       rs685664        T       C       .       PASS    AA=T;DP=127     GT:GQ:DP        0|1:100:27      0|0:35:10       0|0:100:41
+6      33969102        rs55655633      A       T       .       PASS    AA=A;DP=93      GT:GQ:DP        0|1:100:27      0|0:35:10       0|0:100:58
+9      95741108        rs4512444       A       C       .       PASS    AA=C;DP=111     GT:GQ:DP        0|1:100:27      0|0:35:10       0|0:100:71
+3      51027447        .       A       G       .       PASS    AA=a;DP=107     GT:GQ:DP        0|1:100:27      0|0:35:20       0|0:100:62
+5      81641937        rs3734115       T       C       .       PASS    AA=T;DP=122     GT:GQ:DP        0|1:100:27      0|0:35:21       0|0:100:76
+1      104736552       rs7516282       T       C       .       PASS    AA=t;DP=110     GT:GQ:DP        0|1:100:27      0|0:36:17       0|0:100:71
+6      75734978        rs7754758       T       C       .       PASS    AA=T;DP=135     GT:GQ:DP        0|1:100:27      0|0:36:20       0|0:100:49
+5      175189819       rs883019        C       G       .       PASS    AA=C;DP=89      GT:GQ:DP        0|1:100:27      0|0:38:11       0|0:100:40
+13     80958834        rs7996074       A       G       .       PASS    AA=G;DP=82      GT:GQ:DP        0|1:100:27      0|0:38:12       0|0:100:44
+6      169566552       .       C       T       .       PASS    AA=C;DP=106     GT:GQ:DP        0|1:100:27      0|0:38:12       0|0:100:68
+12     124547666       rs7302148       G       C       .       PASS    AA=C;DP=145     GT:GQ:DP        0|1:100:27      0|0:38:18       0|0:100:56
+1      221150626       .       T       G       .       PASS    AA=T;DP=128     GT:GQ:DP        0|1:100:27      0|0:39:22       0|0:100:77
+8      58497430        .       A       G       .       PASS    AA=a;DP=118     GT:GQ:DP        0|1:100:27      0|0:41:12       0|0:100:41
+18     38795825        rs9951372       C       A       .       PASS    AA=C;DP=122     GT:GQ:DP        0|1:100:27      0|0:41:12       0|0:100:44
+12     38305208        .       C       T       .       PASS    AA=C;DP=93      GT:GQ:DP        0|1:100:27      0|0:41:12       0|0:100:45
+12     81015364        rs7302762       C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        0|1:100:27      0|0:41:12       0|0:100:71
+1      153414068       .       G       A       .       PASS    AA=G;DP=120     GT:GQ:DP        0|1:100:27      0|0:41:12       0|0:100:81
+21     44962097        .       C       T       .       PASS    AA=T;DP=91      GT:GQ:DP        0|1:100:27      0|0:41:13       0|0:100:52
+16     73308929        .       G       A       .       PASS    AA=G;DP=93      GT:GQ:DP        0|1:100:27      0|0:41:13       0|0:100:53
+14     55579267        rs241537        G       A       .       PASS    AA=G;DP=156     GT:GQ:DP        0|1:100:27      0|0:41:26       0|0:100:103
+9      86080751        rs11140489      T       A       .       PASS    AA=A;DP=132     GT:GQ:DP        0|1:100:27      0|0:43:24       0|0:100:35
+19     20720426        rs8105859       T       A       .       PASS    AA=.;DP=127     GT:GQ:DP        0|1:100:27      0|0:43:24       0|0:100:79
+2      240199076       .       G       A       .       PASS    AA=g;DP=88      GT:GQ:DP        0|1:100:27      0|0:44:13       0|0:100:39
+15     62946323        .       C       T       .       PASS    AA=C;DP=102     GT:GQ:DP        0|1:100:27      0|0:44:13       0|0:100:53
+7      82441895        rs17371806      A       G       .       PASS    AA=A;DP=101     GT:GQ:DP        0|1:100:27      0|0:44:13       0|0:100:60
+11     124126451       rs2075712       C       A       .       PASS    AA=C;DP=148     GT:GQ:DP        0|1:100:27      0|0:44:13       0|0:100:65
+19     51574674        rs62136669      C       T       .       PASS    AA=C;DP=122     GT:GQ:DP        0|1:100:27      0|0:44:13       0|0:100:83
+18     72600654        rs28524868      G       A       .       PASS    AA=A;DP=99      GT:GQ:DP        0|1:100:27      0|0:44:14       0|0:100:59
+5      4013495 rs686273        C       T       .       PASS    AA=T;DP=111     GT:GQ:DP        0|1:100:27      0|0:44:14       0|0:100:70
+13     29474028        rs9506249       C       T       .       PASS    AA=T;DP=113     GT:GQ:DP        0|1:100:27      0|0:46:25       0|0:100:60
+2      75565874        .       G       A       .       PASS    AA=G;DP=138     GT:GQ:DP        0|1:100:27      0|0:46:25       0|0:100:87
+8      77288120        rs11994651      C       T       .       PASS    AA=-;DP=87      GT:GQ:DP        0|1:100:27      0|0:47:14       0|0:100:45
+1      54493732        .       G       C       .       PASS    AA=G;DP=94      GT:GQ:DP        0|1:100:27      0|0:47:14       0|0:100:52
+1      83808327        rs12731158      A       G       .       PASS    AA=A;DP=103;HM2 GT:GQ:DP        0|1:100:27      0|0:47:14       0|0:100:61
+6      152551498       rs9479243       T       G       .       PASS    AA=T;DP=104     GT:GQ:DP        0|1:100:27      0|0:47:14       0|0:100:62
+11     112357171       rs2298527       G       C       .       PASS    AA=G;DP=120     GT:GQ:DP        0|1:100:27      0|0:47:14       0|0:100:70
+12     14613173        .       A       G       .       PASS    AA=a;DP=109     GT:GQ:DP        0|1:100:27      0|0:47:14       0|0:100:70
+6      48390127        rs548695        T       C       .       PASS    AA=C;DP=115     GT:GQ:DP        0|1:100:27      0|0:47:14       0|0:100:74
+12     123281812       .       T       C       .       PASS    AA=T;DP=119     GT:GQ:DP        0|1:100:27      0|0:47:14       0|0:100:77
+18     9009143 rs7228127       C       T       .       PASS    AA=C;DP=98      GT:GQ:DP        0|1:100:27      0|0:47:15       0|0:100:58
+17     4370290 rs36095827      G       T       .       PASS    AA=G;DP=115     GT:GQ:DP        0|1:100:27      0|0:47:15       0|0:100:59
+6      104040901       rs9377498       T       C       .       PASS    AA=C;DP=101     GT:GQ:DP        0|1:100:27      0|0:47:15       0|0:100:60
+1      150812688       .       G       C       .       PASS    AA=G;DP=114     GT:GQ:DP        0|1:100:27      0|0:47:15       0|0:100:73
+7      13843550        rs7800240       C       G       .       PASS    AA=C;DP=88      GT:GQ:DP        0|1:100:27      0|0:47:16       0|0:100:45
+4      109647001       .       A       T       .       PASS    AA=T;DP=104     GT:GQ:DP        0|1:100:27      0|0:47:29       0|0:100:48
+20     37517235        .       T       G       .       PASS    AA=T;DP=134     GT:GQ:DP        0|1:100:27      0|0:48:20       0|0:100:43
+12     107027361       rs12322652      C       A       .       PASS    AA=C;DP=122     GT:GQ:DP        0|1:100:27      0|0:49:21       0|0:100:76
+6      14373861        rs4712230       G       A       .       PASS    AA=G;DP=125     GT:GQ:DP        0|1:100:27      0|0:49:26       0|0:100:75
+5      140143512       rs10069930      T       A       .       PASS    AA=t;DP=89      GT:GQ:DP        0|1:100:27      0|0:50:15       0|0:100:35
+18     42132305        .       C       T       .       PASS    AA=C;DP=95      GT:GQ:DP        0|1:100:27      0|0:50:15       0|0:100:43
+16     86463415        .       T       A       .       PASS    AA=T;DP=94      GT:GQ:DP        0|1:100:27      0|0:50:15       0|0:100:49
+14     21682656        rs58080324      A       G       .       PASS    AA=A;DP=93      GT:GQ:DP        0|1:100:27      0|0:50:15       0|0:100:52
+2      6095998 rs2257197       A       G       .       PASS    AA=A;DP=100     GT:GQ:DP        0|1:100:27      0|0:50:15       0|0:100:59
+17     76783038        .       A       G       .       PASS    AA=G;DP=105     GT:GQ:DP        0|1:100:27      0|0:50:15       0|0:100:61
+7      49253522        rs7786931       C       T       .       PASS    AA=C;DP=107     GT:GQ:DP        0|1:100:27      0|0:50:15       0|0:100:63
+4      53194910        rs56194644      C       A       .       PASS    AA=C;DP=133     GT:GQ:DP        0|1:100:27      0|0:50:15       0|0:100:88
+1      69612389        rs288935        G       A       .       PASS    AA=G;DP=97      GT:GQ:DP        0|1:100:27      0|0:50:16       0|0:100:53
+22     47957037        rs11913693      G       C       .       PASS    AA=G;DP=104     GT:GQ:DP        0|1:100:27      0|0:50:16       0|0:100:63
+12     77020479        .       A       T       .       PASS    AA=A;DP=112     GT:GQ:DP        0|1:100:27      0|0:50:16       0|0:100:67
+11     63999071        .       A       G       .       PASS    AA=A;DP=121     GT:GQ:DP        0|1:100:27      0|0:50:17       0|0:55:27
+2      26281609        .       T       G       .       PASS    AA=T;DP=97      GT:GQ:DP        0|1:100:27      0|0:50:22       0|0:100:49
+3      142365958       rs11919104      T       C       .       PASS    AA=T;DP=114     GT:GQ:DP        0|1:100:27      0|0:50:22       0|0:100:65
+6      170482929       .       G       A       .       PASS    AA=G;DP=109     GT:GQ:DP        0|1:100:27      0|0:51:25       0|0:100:57
+17     24864693        .       T       C       .       PASS    AA=T;DP=119     GT:GQ:DP        0|1:100:27      0|0:52:24       0|0:69:23
+16     63839247        rs7184122       G       A       .       PASS    AA=A;DP=139     GT:GQ:DP        0|1:100:27      0|0:52:27       0|0:100:84
+22     41796349        rs6003031       G       A       .       PASS    AA=g;DP=91      GT:GQ:DP        0|1:100:27      0|0:53:16       0|0:100:47
+4      3648269 rs56188304      G       A       .       PASS    AA=g;DP=115     GT:GQ:DP        0|1:100:27      0|0:53:16       0|0:100:71
+7      24350340        rs873156        C       T       .       PASS    AA=T;DP=141     GT:GQ:DP        0|1:100:27      0|0:53:16       0|0:100:96
+12     109697095       rs17683336      C       T       .       PASS    AA=C;DP=114     GT:GQ:DP        0|1:100:27      0|0:53:16       0|0:81:27
+14     40287616        rs8018432       A       T       .       PASS    AA=A;DP=83      GT:GQ:DP        0|1:100:27      0|0:53:16       0|0:93:31
+8      109756951       .       A       T       .       PASS    AA=A;DP=116     GT:GQ:DP        0|1:100:27      0|0:53:17       0|0:96:32
+5      110540151       rs11956799      C       A       .       PASS    AA=C;DP=99      GT:GQ:DP        0|1:100:27      0|0:54:26       0|0:100:46
+7      101363918       .       C       A       .       PASS    AA=C;DP=122     GT:GQ:DP        0|1:100:27      0|0:55:22       0|0:100:73
+6      170273260       rs3013251       C       T       .       PASS    AA=C;DP=138     GT:GQ:DP        0|1:100:27      0|0:55:28       0|0:100:79
+20     8559853 rs6086542       C       T       .       PASS    AA=C;DP=99      GT:GQ:DP        0|1:100:27      0|0:56:17       0|0:100:56
+14     27838469        .       C       T       .       PASS    AA=C;DP=105     GT:GQ:DP        0|1:100:27      0|0:56:17       0|0:100:58
+1      217210429       rs596820        A       G       .       PASS    AA=a;DP=107;HM2 GT:GQ:DP        0|1:100:27      0|0:56:17       0|0:100:64
+3      153304952       .       T       C       .       PASS    AA=T;DP=118     GT:GQ:DP        0|1:100:27      0|0:56:17       0|0:100:74
+8      23492697        rs2314686       C       A       .       PASS    AA=C;DP=124     GT:GQ:DP        0|1:100:27      0|0:56:18       0|0:100:38
+8      135983377       .       C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        0|1:100:27      0|0:56:18       0|0:100:68
+3      31331277        rs11924157      T       C       .       PASS    AA=T;DP=115     GT:GQ:DP        0|1:100:27      0|0:56:18       0|0:100:71
+18     46256890        .       C       T       .       PASS    AA=C;DP=119     GT:GQ:DP        0|1:100:27      0|0:56:18       0|0:100:72
+1      102864351       rs12045683      T       G       .       PASS    AA=T;DP=120     GT:GQ:DP        0|1:100:27      0|0:56:18       0|0:100:75
+13     49894968        rs17074309      T       A       .       PASS    AA=T;DP=123     GT:GQ:DP        0|1:100:27      0|0:56:18       0|0:100:79
+13     63745998        .       G       C       .       PASS    AA=G;DP=112     GT:GQ:DP        0|1:100:27      0|0:56:18       0|0:75:25
+10     42473424        rs7072200       A       G       .       PASS    AA=a;DP=133     GT:GQ:DP        0|1:100:27      0|0:56:23       0|0:100:83
+1      243040680       .       T       A       .       PASS    AA=A;DP=93      GT:GQ:DP        0|1:100:27      0|0:58:24       0|0:75:35
+1      113399677       .       C       A       .       PASS    AA=C;DP=132     GT:GQ:DP        0|1:100:27      0|0:58:29       0|0:100:38
+22     16433251        .       A       G       .       PASS    AA=A;DP=152     GT:GQ:DP        0|1:100:27      0|0:58:29       0|0:100:52
+10     87761214        .       T       A       .       PASS    AA=T;DP=143     GT:GQ:DP        0|1:100:27      0|0:59:18       0|0:100:48
+1      102607421       rs1856779       C       T       .       PASS    AA=T;DP=107;HM2 GT:GQ:DP        0|1:100:27      0|0:59:18       0|0:100:64
+3      39579289        rs541692        A       G       .       PASS    AA=-;DP=115     GT:GQ:DP        0|1:100:27      0|0:59:18       0|0:100:74
+13     104182397       rs11839239      G       A       .       PASS    AA=A;DP=122     GT:GQ:DP        0|1:100:27      0|0:59:18       0|0:100:79
+7      33933610        rs13221600      A       G       .       PASS    AA=A;DP=136     GT:GQ:DP        0|1:100:27      0|0:59:19       0|0:100:42
+1      106529292       .       C       G       .       PASS    AA=C;DP=108     GT:GQ:DP        0|1:100:27      0|0:59:19       0|0:100:62
+2      118947818       .       C       T       .       PASS    AA=C;DP=109     GT:GQ:DP        0|1:100:27      0|0:59:19       0|0:100:65
+8      115994521       .       G       A       .       PASS    AA=G;DP=113     GT:GQ:DP        0|1:100:27      0|0:59:19       0|0:100:68
+5      116511021       .       G       A       .       PASS    AA=G;DP=118     GT:GQ:DP        0|1:100:27      0|0:59:19       0|0:100:72
+1      89192683        rs12068686      C       T       .       PASS    AA=T;DP=118;HM2 GT:GQ:DP        0|1:100:27      0|0:59:19       0|0:100:74
+10     122011411       .       C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        0|1:100:27      0|0:59:19       0|0:100:74
+17     17697807        .       G       A       .       PASS    AA=G;DP=125     GT:GQ:DP        0|1:100:27      0|0:59:19       0|0:100:82
+4      11331090        rs11729868      T       C       .       PASS    AA=T;DP=137     GT:GQ:DP        0|1:100:27      0|0:59:20       0|0:100:49
+18     52764713        .       G       A       .       PASS    AA=G;DP=106     GT:GQ:DP        0|1:100:27      0|0:59:20       0|0:100:58
+15     87013975        rs8030879       C       G       .       PASS    AA=C;DP=107     GT:GQ:DP        0|1:100:27      0|0:59:22       0|0:100:60
+12     80807636        rs7138311       G       A       .       PASS    AA=G;DP=113     GT:GQ:DP        0|1:100:27      0|0:59:22       0|0:100:63
+6      41946795        rs2251168       C       T       .       PASS    AA=C;DP=112     GT:GQ:DP        0|1:100:27      0|0:59:25       0|0:100:59
+17     18541725        rs4924909       A       G       .       PASS    AA=G;DP=116     GT:GQ:DP        0|1:100:27      0|0:5:14        0|0:100:74
+4      159611197       rs11100184      C       T       .       PASS    AA=C;DP=121     GT:GQ:DP        0|1:100:27      0|0:60:23       0|0:100:62
+1      179879859       rs4145778       G       T       .       PASS    AA=G;DP=120     GT:GQ:DP        0|1:100:27      0|0:60:24       0|0:100:64
+5      33291696        .       A       G       .       PASS    AA=A;DP=125     GT:GQ:DP        0|1:100:27      0|0:60:24       0|0:100:72
+12     101053595       rs11111172      T       C       .       PASS    AA=t;DP=147     GT:GQ:DP        0|1:100:27      0|0:60:26       0|0:100:49
+1      51031368        .       G       C       .       PASS    AA=G;DP=148     GT:GQ:DP        0|1:100:27      0|0:60:30       0|0:100:42
+4      172050546       .       A       G       .       PASS    AA=G;DP=119     GT:GQ:DP        0|1:100:27      0|0:60:30       0|0:100:63
+4      185438836       rs10029169      A       G       .       PASS    AA=A;DP=114     GT:GQ:DP        0|1:100:27      0|0:61:29       0|0:100:46
+13     45638056        .       G       A       .       PASS    AA=G;DP=92      GT:GQ:DP        0|1:100:27      0|0:62:19       0|0:100:34
+14     48359384        rs55846804      G       C       .       PASS    AA=G;DP=123     GT:GQ:DP        0|1:100:27      0|0:62:19       0|0:100:34
+3      15728872        rs6771419       A       G       .       PASS    AA=A;DP=127     GT:GQ:DP        0|1:100:27      0|0:62:19       0|0:100:41
+5      29697577        .       G       A       .       PASS    AA=G;DP=91      GT:GQ:DP        0|1:100:27      0|0:62:19       0|0:100:42
+14     41895106        rs59853150      G       A       .       PASS    AA=G;DP=91      GT:GQ:DP        0|1:100:27      0|0:62:19       0|0:100:45
+5      41247610        rs2921177       T       C       .       PASS    AA=T;DP=97      GT:GQ:DP        0|1:100:27      0|0:62:19       0|0:100:52
+21     22725878        rs7279537       T       C       .       PASS    AA=T;DP=109     GT:GQ:DP        0|1:100:27      0|0:62:19       0|0:100:60
+21     20510251        rs957479        A       G       .       PASS    AA=G;DP=109     GT:GQ:DP        0|1:100:27      0|0:62:19       0|0:100:62
+6      86112431        rs60308797      C       T       .       PASS    AA=T;DP=110     GT:GQ:DP        0|1:100:27      0|0:62:19       0|0:100:64
+7      115503957       .       G       T       .       PASS    AA=G;DP=115     GT:GQ:DP        0|1:100:27      0|0:62:19       0|0:100:71
+9      89857364        rs11790541      C       T       .       PASS    AA=C;DP=124     GT:GQ:DP        0|1:100:27      0|0:62:19       0|0:100:79
+11     59440964        .       T       C       .       PASS    AA=N;DP=128     GT:GQ:DP        0|1:100:27      0|0:62:19       0|0:100:83
+12     79090649        rs58455023      G       A       .       PASS    AA=G;DP=130     GT:GQ:DP        0|1:100:27      0|0:62:19       0|0:100:84
+6      125538189       .       A       C       .       PASS    AA=A;DP=76      GT:GQ:DP        0|1:100:27      0|0:62:19       0|0:87:29
+6      69138866        rs1907149       G       A       .       PASS    AA=G;DP=132     GT:GQ:DP        0|1:100:27      0|0:62:20       0|0:100:43
+12     20936961        rs11045585      A       G       .       PASS    AA=a;DP=96      GT:GQ:DP        0|1:100:27      0|0:62:20       0|0:100:51
+2      1356634 .       C       G       .       PASS    AA=C;DP=104     GT:GQ:DP        0|1:100:27      0|0:62:20       0|0:100:54
+5      17120864        rs35632506      A       C       .       PASS    AA=A;DP=111     GT:GQ:DP        0|1:100:27      0|0:62:20       0|0:100:65
+16     17857546        rs2015573       C       A       .       PASS    AA=C;DP=116     GT:GQ:DP        0|1:100:27      0|0:62:20       0|0:100:69
+16     7944936 rs9940103       G       A       .       PASS    AA=G;DP=111     GT:GQ:DP        0|1:100:27      0|0:62:21       0|0:100:64
+10     94847383        rs6583858       C       G       .       PASS    AA=G;DP=118     GT:GQ:DP        0|1:100:27      0|0:62:21       0|0:100:67
+6      166901504       .       T       C       .       PASS    AA=T;DP=117     GT:GQ:DP        0|1:100:27      0|0:62:21       0|0:100:70
+9      2421347 .       A       T       .       PASS    AA=A;DP=120     GT:GQ:DP        0|1:100:27      0|0:62:21       0|0:99:33
+7      70487602        .       A       G       .       PASS    AA=A;DP=130     GT:GQ:DP        0|1:100:27      0|0:62:22       0|0:100:39
+10     113742397       .       G       A       .       PASS    AA=G;DP=134     GT:GQ:DP        0|1:100:27      0|0:62:23       0|0:100:81
+20     40132902        rs6102659       G       T       .       PASS    AA=G;DP=91      GT:GQ:DP        0|1:100:27      0|0:65:20       0|0:100:44
+9      16696025        rs1337398       C       G       .       PASS    AA=G;DP=102     GT:GQ:DP        0|1:100:27      0|0:65:20       0|0:100:55
+2      149903509       .       A       G       .       PASS    AA=A;DP=106     GT:GQ:DP        0|1:100:27      0|0:65:20       0|0:100:56
+17     44630826        rs9303549       T       C       .       PASS    AA=T;DP=109     GT:GQ:DP        0|1:100:27      0|0:65:20       0|0:100:61
+2      171708579       rs60928633      G       C       .       PASS    AA=G;DP=115     GT:GQ:DP        0|1:100:27      0|0:65:20       0|0:100:69
+7      78861545        rs28510832      C       A       .       PASS    AA=C;DP=127     GT:GQ:DP        0|1:100:27      0|0:65:20       0|0:100:78
+2      79512257        rs55784904      A       G       .       PASS    AA=G;DP=140     GT:GQ:DP        0|1:100:27      0|0:65:21       0|0:100:53
+17     3382830 rs395357        C       T       .       PASS    AA=c;DP=150     GT:GQ:DP        0|1:100:27      0|0:65:21       0|0:100:57
+12     724124  rs11064503      C       T       .       PASS    AA=C;DP=122     GT:GQ:DP        0|1:100:27      0|0:65:21       0|0:100:74
+4      85567854        .       C       T       .       PASS    AA=C;DP=125     GT:GQ:DP        0|1:100:27      0|0:65:21       0|0:100:78
+14     51428840        .       C       T       .       PASS    AA=C;DP=91      GT:GQ:DP        0|1:100:27      0|0:65:21       0|0:96:33
+11     58721876        rs7952261       G       A       .       PASS    AA=G;DP=145     GT:GQ:DP        0|1:100:27      0|0:66:32       0|0:100:91
+6      128535685       rs17055406      A       G       .       PASS    AA=C;DP=105     GT:GQ:DP        0|1:100:27      0|0:68:21       0|0:100:47
+4      27785642        .       C       G       .       PASS    AA=C;DP=112     GT:GQ:DP        0|1:100:27      0|0:68:21       0|0:100:57
+3      6509605 .       C       T       .       PASS    AA=C;DP=114     GT:GQ:DP        0|1:100:27      0|0:68:21       0|0:100:67
+3      76843841        rs264549        A       G       .       PASS    AA=G;DP=118     GT:GQ:DP        0|1:100:27      0|0:68:21       0|0:100:69
+3      156720197       .       T       C       .       PASS    AA=T;DP=117     GT:GQ:DP        0|1:100:27      0|0:68:21       0|0:100:70
+14     97856333        rs11847597      G       A       .       PASS    AA=G;DP=119     GT:GQ:DP        0|1:100:27      0|0:68:21       0|0:100:71
+5      3749960 rs6875747       T       A       .       PASS    AA=T;DP=119     GT:GQ:DP        0|1:100:27      0|0:68:21       0|0:100:71
+14     82181589        .       G       T       .       PASS    AA=G;DP=121     GT:GQ:DP        0|1:100:27      0|0:68:21       0|0:100:74
+2      150489907       rs13424131      C       T       .       PASS    AA=T;DP=120     GT:GQ:DP        0|1:100:27      0|0:68:21       0|0:100:74
+16     12236767        .       G       A       .       PASS    AA=A;DP=133     GT:GQ:DP        0|1:100:27      0|0:68:21       0|0:100:86
+2      121639689       rs57606349      C       G       .       PASS    AA=C;DP=119     GT:GQ:DP        0|1:100:27      0|0:68:21       0|0:53:29
+18     45822863        rs56172008      T       C       .       PASS    AA=T;DP=91      GT:GQ:DP        0|1:100:27      0|0:68:21       0|0:93:31
+7      158130670       rs55957763      A       G       .       PASS    AA=A;DP=134     GT:GQ:DP        0|1:100:27      0|0:68:22       0|0:100:38
+1      18887452        rs7527312       C       G       .       PASS    AA=C;DP=100;HM2 GT:GQ:DP        0|1:100:27      0|0:68:22       0|0:100:52
+20     20887831        .       G       C       .       PASS    AA=G;DP=108     GT:GQ:DP        0|1:100:27      0|0:68:22       0|0:100:59
+18     41118655        rs12458686      G       A       .       PASS    AA=G;DP=118     GT:GQ:DP        0|1:100:27      0|0:68:22       0|0:100:67
+10     76787838        rs61409991      T       C       .       PASS    AA=T;DP=117     GT:GQ:DP        0|1:100:27      0|0:68:22       0|0:100:68
+15     76869486        rs2277547       A       G       .       PASS    AA=A;DP=140     GT:GQ:DP        0|1:100:27      0|0:68:23       0|0:100:42
+12     118960817       rs7295717       G       A       .       PASS    AA=A;DP=99      GT:GQ:DP        0|1:100:27      0|0:68:23       0|0:100:50
+10     49170081        rs61840543      G       A       .       PASS    AA=G;DP=115     GT:GQ:DP        0|1:100:27      0|0:68:23       0|0:100:67
+3      73748705        .       G       A       .       PASS    AA=G;DP=130     GT:GQ:DP        0|1:100:27      0|0:68:23       0|0:100:78
+6      109637911       rs9487009       A       G       .       PASS    AA=G;DP=103     GT:GQ:DP        0|1:100:27      0|0:69:29       0|0:100:44
+4      48160908        rs7441842       A       C       .       PASS    AA=A;DP=141     GT:GQ:DP        0|1:100:27      0|0:70:27       0|0:100:83
+6      168714057       rs6455534       T       G       .       PASS    AA=T;DP=109     GT:GQ:DP        0|1:100:27      0|0:71:22       0|0:100:44
+11     96623869        .       G       A       .       PASS    AA=G;DP=144     GT:GQ:DP        0|1:100:27      0|0:71:22       0|0:100:52
+2      67544451        rs11891847      A       T       .       PASS    AA=A;DP=104     GT:GQ:DP        0|1:100:27      0|0:71:22       0|0:100:55
+1      4622291 rs2035454       A       G       .       PASS    AA=A;DP=121;HM3 GT:GQ:DP        0|1:100:27      0|0:71:22       0|0:100:72
+22     30113500        .       A       G       .       PASS    AA=a;DP=126     GT:GQ:DP        0|1:100:27      0|0:71:22       0|0:100:78
+4      177425475       rs13129242      T       G       .       PASS    AA=T;DP=130     GT:GQ:DP        0|1:100:27      0|0:71:22       0|0:100:81
+3      192948408       rs9880248       A       G       .       PASS    AA=A;DP=137     GT:GQ:DP        0|1:100:27      0|0:71:22       0|0:100:89
+5      144137029       rs456670        G       C       .       PASS    AA=C;DP=126     GT:GQ:DP        0|1:100:27      0|0:71:22       0|0:99:33
+4      67652569        rs17087984      A       G       .       PASS    AA=A;DP=149     GT:GQ:DP        0|1:100:27      0|0:71:23       0|0:100:48
+14     39331782        .       G       A       .       PASS    AA=G;DP=117     GT:GQ:DP        0|1:100:27      0|0:71:23       0|0:100:68
+5      23040960        rs10061735      C       T       .       PASS    AA=C;DP=122     GT:GQ:DP        0|1:100:27      0|0:71:23       0|0:100:72
+12     38534840        .       G       T       .       PASS    AA=G;DP=129     GT:GQ:DP        0|1:100:27      0|0:71:23       0|0:100:82
+11     124697462       .       G       A       .       PASS    AA=g;DP=139     GT:GQ:DP        0|1:100:27      0|0:71:23       0|0:100:93
+3      7392802 .       G       A       .       PASS    AA=G;DP=123     GT:GQ:DP        0|1:100:27      0|0:71:24       0|0:100:69
+10     97877262        rs2168731       T       C       .       PASS    AA=T;DP=101     GT:GQ:DP        0|1:100:27      0|0:71:24       0|0:28:39
+16     58433177        .       C       G       .       PASS    AA=C;DP=108     GT:GQ:DP        0|1:100:27      0|0:74:23       0|0:100:58
+10     62685429        .       A       C       .       PASS    AA=A;DP=114     GT:GQ:DP        0|1:100:27      0|0:74:23       0|0:100:66
+12     129910340       .       A       T       .       PASS    AA=T;DP=118     GT:GQ:DP        0|1:100:27      0|0:74:23       0|0:100:69
+13     49824969        .       A       C       .       PASS    AA=A;DP=121     GT:GQ:DP        0|1:100:27      0|0:74:23       0|0:100:72
+5      25297324        rs12655679      A       T       .       PASS    AA=A;DP=123     GT:GQ:DP        0|1:100:27      0|0:74:23       0|0:100:76
+1      190450286       .       T       C       .       PASS    AA=T;DP=124     GT:GQ:DP        0|1:100:27      0|0:74:24       0|0:100:75
+15     51395451        .       G       A       .       PASS    AA=G;DP=128     GT:GQ:DP        0|1:100:27      0|0:74:24       0|0:100:79
+10     11424423        rs56199184      T       C       .       PASS    AA=T;DP=136     GT:GQ:DP        0|1:100:27      0|0:74:25       0|0:100:46
+6      102361118       .       T       C       .       PASS    AA=T;DP=116     GT:GQ:DP        0|1:100:27      0|0:74:25       0|0:100:63
+10     122592178       .       C       T       .       PASS    AA=C;DP=118     GT:GQ:DP        0|1:100:27      0|0:75:35       0|0:100:56
+7      24080581        .       A       C       .       PASS    AA=A;DP=107     GT:GQ:DP        0|1:100:27      0|0:77:24       0|0:100:44
+8      47727050        rs2354492       T       G       .       PASS    AA=t;DP=105     GT:GQ:DP        0|1:100:27      0|0:77:24       0|0:100:53
+4      153990871       .       C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        0|1:100:27      0|0:77:24       0|0:100:58
+18     19968789        rs11082962      C       A       .       PASS    AA=A;DP=113     GT:GQ:DP        0|1:100:27      0|0:77:24       0|0:100:61
+15     92966584        rs1014922       T       G       .       PASS    AA=t;DP=113     GT:GQ:DP        0|1:100:27      0|0:77:24       0|0:100:62
+1      89085772        .       C       G       .       PASS    AA=C;DP=118     GT:GQ:DP        0|1:100:27      0|0:77:24       0|0:100:69
+5      157437103       rs7711966       C       T       .       PASS    AA=c;DP=124     GT:GQ:DP        0|1:100:27      0|0:77:24       0|0:100:76
+11     36578704        rs12273684      A       G       .       PASS    AA=A;DP=130     GT:GQ:DP        0|1:100:27      0|0:77:24       0|0:100:77
+X      2679231 .       A       G       .       PASS    AA=G;DP=89      GT:GQ:DP        0|1:100:27      0|0:77:24       0|0:96:33
+16     74742918        .       T       G       .       PASS    AA=G;DP=102     GT:GQ:DP        0|1:100:27      0|0:77:25       0|0:100:49
+4      32289833        rs10016133      A       C       .       PASS    AA=C;DP=113     GT:GQ:DP        0|1:100:27      0|0:77:25       0|0:100:64
+6      44646339        .       C       T       .       PASS    AA=C;DP=139     GT:GQ:DP        0|1:100:27      0|0:77:25       0|0:100:87
+1      14018501        rs1810474       A       G       .       PASS    AA=G;DP=140;HM2;HM3     GT:GQ:DP        0|1:100:27      0|0:77:25       0|0:100:90
+3      160844938       rs16830579      G       A       .       PASS    AA=G;DP=138     GT:GQ:DP        0|1:100:27      0|0:77:25       0|0:76:37
+3      72119248        rs1505972       C       T       .       PASS    AA=T;DP=108     GT:GQ:DP        0|1:100:27      0|0:77:26       0|0:100:54
+16     75660551        rs682081        T       C       .       PASS    AA=C;DP=122     GT:GQ:DP        0|1:100:27      0|0:77:26       0|0:100:71
+5      128852254       rs9784592       C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        0|1:100:27      0|0:77:28       0|0:100:60
+8      121988040       .       A       C       .       PASS    AA=A;DP=148     GT:GQ:DP        0|1:100:27      0|0:78:35       0|0:100:48
+4      165251655       .       T       C       .       PASS    AA=T;DP=102     GT:GQ:DP        0|1:100:27      0|0:80:25       0|0:100:51
+2      149393595       rs4270296       T       A       .       PASS    AA=T;DP=111     GT:GQ:DP        0|1:100:27      0|0:80:25       0|0:100:57
+5      14382827        rs40971 T       C       .       PASS    AA=T;DP=118     GT:GQ:DP        0|1:100:27      0|0:80:25       0|0:100:64
+3      63245244        rs7633442       C       T       .       PASS    AA=T;DP=124     GT:GQ:DP        0|1:100:27      0|0:80:25       0|0:100:73
+4      109051923       .       G       A       .       PASS    AA=G;DP=138     GT:GQ:DP        0|1:100:27      0|0:80:25       0|0:100:88
+2      52907155        .       G       A       .       PASS    AA=G;DP=137     GT:GQ:DP        0|1:100:27      0|0:80:26       0|0:100:39
+22     26124969        rs5762116       C       T       .       PASS    AA=C;DP=109     GT:GQ:DP        0|1:100:27      0|0:80:26       0|0:100:53
+7      13074048        .       T       C       .       PASS    AA=T;DP=106     GT:GQ:DP        0|1:100:27      0|0:80:26       0|0:100:53
+8      75560930        rs10283285      C       T       .       PASS    AA=C;DP=157     GT:GQ:DP        0|1:100:27      0|0:80:26       0|0:100:62
+4      141182531       rs28568398      A       G       .       PASS    AA=A;DP=115     GT:GQ:DP        0|1:100:27      0|0:80:26       0|0:100:63
+9      30837751        rs1999446       T       C       .       PASS    AA=C;DP=132     GT:GQ:DP        0|1:100:27      0|0:80:26       0|0:100:68
+3      113326314       .       A       G       .       PASS    AA=A;DP=125     GT:GQ:DP        0|1:100:27      0|0:80:26       0|0:100:73
+6      26263664        rs7773206       G       A       .       PASS    AA=G;DP=134     GT:GQ:DP        0|1:100:27      0|0:80:26       0|0:100:80
+16     81240079        rs3910226       G       C       .       PASS    AA=C;DP=131     GT:GQ:DP        0|1:100:27      0|0:80:27       0|0:100:36
+2      85046151        .       G       A       .       PASS    AA=G;DP=125     GT:GQ:DP        0|1:100:27      0|0:80:27       0|0:100:73
+7      105858861       rs55919781      C       A       .       PASS    AA=C;DP=138     GT:GQ:DP        0|1:100:27      0|0:80:27       0|0:100:86
+15     52020351        .       C       T       .       PASS    AA=c;DP=142     GT:GQ:DP        0|1:100:27      0|0:80:28       0|0:100:84
+5      145189613       rs663205        C       T       .       PASS    AA=C;DP=145     GT:GQ:DP        0|1:100:27      0|0:80:31       0|0:100:42
+6      5555651 .       C       A       .       PASS    AA=C;DP=143     GT:GQ:DP        0|1:100:27      0|0:80:35       0|0:100:81
+17     48731970        rs806921        C       G       .       PASS    AA=G;DP=116     GT:GQ:DP        0|1:100:27      0|0:81:36       0|0:100:56
+8      54735203        .       T       A       .       PASS    AA=T;DP=150     GT:GQ:DP        0|1:100:27      0|0:83:26       0|0:100:57
+5      131350393       rs77938 C       T       .       PASS    AA=C;DP=122     GT:GQ:DP        0|1:100:27      0|0:83:26       0|0:100:68
+21     25276778        .       T       A       .       PASS    AA=T;DP=121     GT:GQ:DP        0|1:100:27      0|0:83:26       0|0:100:69
+8      136541997       .       T       A       .       PASS    AA=T;DP=123     GT:GQ:DP        0|1:100:27      0|0:83:26       0|0:100:70
+6      41498489        rs677081        G       A       .       PASS    AA=G;DP=125     GT:GQ:DP        0|1:100:27      0|0:83:26       0|0:100:73
+4      148159611       rs6817074       G       A       .       PASS    AA=G;DP=141     GT:GQ:DP        0|1:100:27      0|0:83:26       0|0:100:87
+5      79538819        .       G       A       .       PASS    AA=G;DP=104     GT:GQ:DP        0|1:100:27      0|0:83:27       0|0:100:51
+15     78246862        .       C       T       .       PASS    AA=C;DP=130     GT:GQ:DP        0|1:100:27      0|0:83:27       0|0:100:80
+5      62459771        rs1874167       G       T       .       PASS    AA=G;DP=158     GT:GQ:DP        0|1:100:27      0|0:83:32       0|0:100:99
+1      107303957       .       A       C       .       PASS    AA=A;DP=133     GT:GQ:DP        0|1:100:27      0|0:86:27       0|0:100:38
+8      136427364       rs55691986      A       G       .       PASS    AA=A;DP=141     GT:GQ:DP        0|1:100:27      0|0:86:27       0|0:100:48
+9      76744506        rs56228016      C       T       .       PASS    AA=C;DP=100     GT:GQ:DP        0|1:100:27      0|0:86:27       0|0:100:50
+7      21571542        rs7787997       T       C       .       PASS    AA=T;DP=125     GT:GQ:DP        0|1:100:27      0|0:86:27       0|0:100:70
+18     61988944        rs62094293      G       A       .       PASS    AA=G;DP=132     GT:GQ:DP        0|1:100:27      0|0:86:27       0|0:100:76
+2      198868455       rs7566235       T       C       .       PASS    AA=T;DP=132     GT:GQ:DP        0|1:100:27      0|0:86:27       0|0:100:78
+12     65588279        rs1566827       A       G       .       PASS    AA=G;DP=133     GT:GQ:DP        0|1:100:27      0|0:86:27       0|0:100:79
+9      108701161       .       C       T       .       PASS    AA=T;DP=117     GT:GQ:DP        0|1:100:27      0|0:86:28       0|0:100:66
+5      10258410        rs7736527       C       T       .       PASS    AA=T;DP=124     GT:GQ:DP        0|1:100:27      0|0:86:28       0|0:100:68
+9      114246396       rs10981407      A       G       .       PASS    AA=A;DP=144     GT:GQ:DP        0|1:100:27      0|0:86:30       0|0:100:49
+5      160044019       rs1421949       T       G       .       PASS    AA=T;DP=149     GT:GQ:DP        0|1:100:27      0|0:87:29       0|0:100:50
+13     32183934        .       T       C       .       PASS    AA=T;DP=119     GT:GQ:DP        0|1:100:27      0|0:89:28       0|0:100:64
+1      162423343       rs12042772      G       A       .       PASS    AA=A;DP=126     GT:GQ:DP        0|1:100:27      0|0:89:28       0|0:100:71
+15     56217583        rs9920853       A       T       .       PASS    AA=A;DP=178     GT:GQ:DP        0|1:100:27      0|0:89:28       0|0:100:74
+20     9553603 .       T       G       .       PASS    AA=T;DP=136     GT:GQ:DP        0|1:100:27      0|0:89:28       0|0:100:79
+10     1985951 rs10903609      T       C       .       PASS    AA=T;DP=142     GT:GQ:DP        0|1:100:27      0|0:89:28       0|0:100:85
+22     32554916        rs2267298       C       A       .       PASS    AA=A;DP=130     GT:GQ:DP        0|1:100:27      0|0:89:28       0|0:67:34
+15     81779396        .       A       T       .       PASS    AA=A;DP=145     GT:GQ:DP        0|1:100:27      0|0:89:29       0|0:100:46
+2      27006378        rs1371614       C       T       .       PASS    AA=C;DP=136     GT:GQ:DP        0|1:100:27      0|0:89:29       0|0:100:81
+6      134119588       rs9493727       A       G       .       PASS    AA=A;DP=111     GT:GQ:DP        0|1:100:27      0|0:8:17        0|0:100:69
+1      84190787        .       C       T       .       PASS    AA=C;DP=119     GT:GQ:DP        0|1:100:27      0|0:91:35       0|0:100:53
+1      27379207        rs12125274      G       T       .       PASS    AA=N;DP=117     GT:GQ:DP        0|1:100:27      0|0:92:29       0|0:100:57
+3      56392724        .       T       C       .       PASS    AA=T;DP=117     GT:GQ:DP        0|1:100:27      0|0:92:29       0|0:100:61
+8      140142592       rs58449898      C       A       .       PASS    AA=C;DP=131     GT:GQ:DP        0|1:100:27      0|0:92:29       0|0:100:67
+14     46506455        .       T       C       .       PASS    AA=C;DP=129     GT:GQ:DP        0|1:100:27      0|0:92:29       0|0:100:70
+16     25640341        rs62034431      C       T       .       PASS    AA=C;DP=133     GT:GQ:DP        0|1:100:27      0|0:92:30       0|0:100:77
+1      230193694       rs12084556      C       T       .       PASS    AA=C;DP=132;HM2 GT:GQ:DP        0|1:100:27      0|0:92:31       0|0:100:74
+5      142628175       .       C       T       .       PASS    AA=C;DP=134     GT:GQ:DP        0|1:100:27      0|0:92:31       0|0:100:76
+4      42709595        rs9999950       G       A       .       PASS    AA=g;DP=128     GT:GQ:DP        0|1:100:27      0|0:92:34       0|0:100:54
+3      100930147       rs7632327       G       A       .       PASS    AA=G;DP=111     GT:GQ:DP        0|1:100:27      0|0:95:30       0|0:100:55
+7      131188458       .       A       G       .       PASS    AA=A;DP=127     GT:GQ:DP        0|1:100:27      0|0:95:30       0|0:100:70
+2      72824677        .       T       A       .       PASS    AA=T;DP=125     GT:GQ:DP        0|1:100:27      0|0:98:31       0|0:100:68
+3      36728350        .       A       T       .       PASS    AA=A;DP=129     GT:GQ:DP        0|1:100:27      0|0:98:31       0|0:100:71
+8      24148887        rs7007223       T       A       .       PASS    AA=A;DP=131     GT:GQ:DP        0|1:100:27      0|0:98:31       0|0:100:73
+17     66649998        rs2058083       C       T       .       PASS    AA=C;DP=126     GT:GQ:DP        0|1:100:27      0|0:98:32       0|0:100:66
+1      236533106       rs12077218      G       A       .       PASS    AA=A;DP=136;HM2 GT:GQ:DP        0|1:100:27      0|0:98:32       0|0:100:77
+16     82492914        .       C       T       .       PASS    AA=C;DP=131     GT:GQ:DP        0|1:100:27      0|0:98:33       0|0:100:71
+20     31314779        rs6059219       T       A       .       PASS    AA=A;DP=76      GT:GQ:DP        0|1:100:27      0|1:100:14      0|0:99:35
+8      101884092       rs3843554       G       A       .       PASS    AA=g;DP=112     GT:GQ:DP        0|1:100:27      0|1:100:15      0|0:100:69
+6      34501254        .       G       A       .       PASS    AA=G;DP=122     GT:GQ:DP        0|1:100:27      0|1:100:15      0|0:100:83
+18     64478966        rs6566376       G       A       .       PASS    AA=A;DP=109     GT:GQ:DP        0|1:100:27      0|1:100:16      0|0:100:67
+11     124329160       rs3809056       G       A       .       PASS    AA=G;DP=97      GT:GQ:DP        0|1:100:27      0|1:100:19      0|0:100:51
+3      65709892        rs6445507       C       G       .       PASS    AA=C;DP=137     GT:GQ:DP        0|1:100:27      0|1:100:20      0|0:100:91
+12     12839293        rs10845630      A       G       .       PASS    AA=a;DP=127     GT:GQ:DP        0|1:100:27      0|1:100:21      0|0:100:36
+6      155892350       .       G       A       .       PASS    AA=G;DP=102     GT:GQ:DP        0|1:100:27      0|1:100:21      0|0:100:53
+18     53570844        rs12970334      A       G       .       PASS    AA=A;DP=110     GT:GQ:DP        0|1:100:27      0|1:100:21      0|0:100:62
+18     67480883        rs34056954      C       T       .       PASS    AA=c;DP=100     GT:GQ:DP        0|1:100:27      0|1:100:23      0|0:100:50
+12     118255902       rs59319247      G       T       .       PASS    AA=G;DP=108     GT:GQ:DP        0|1:100:27      0|1:100:23      0|0:100:60
+9      34015434        rs1785500       C       T       .       PASS    AA=T;DP=113     GT:GQ:DP        0|1:100:27      0|1:100:23      0|0:100:63
+12     120091727       rs2857592       A       G       .       PASS    AA=A;DP=118     GT:GQ:DP        0|1:100:27      0|1:100:23      0|0:100:69
+3      66866290        .       T       G       .       PASS    AA=T;DP=123     GT:GQ:DP        0|1:100:27      0|1:100:23      0|0:100:75
+8      66621881        rs1107214       T       C       .       PASS    AA=T;DP=136     GT:GQ:DP        0|1:100:27      0|1:100:23      0|0:100:87
+4      155993443       rs4696608       G       A       .       PASS    AA=G;DP=127     GT:GQ:DP        0|1:100:27      0|1:100:24      0|0:100:78
+2      206360545       rs10932125      C       G       .       PASS    AA=C;DP=135     GT:GQ:DP        0|1:100:27      0|1:100:24      0|0:100:82
+3      183985752       rs7639575       T       C       .       PASS    AA=T;DP=114     GT:GQ:DP        0|1:100:27      0|1:100:26      0|0:100:61
+2      204415662       rs231799        C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        0|1:100:27      0|1:100:26      0|0:100:68
+2      131490848       rs7426107       T       A       .       PASS    AA=T;DP=124     GT:GQ:DP        0|1:100:27      0|1:100:26      0|0:100:71
+2      225213589       rs2129610       G       A       .       PASS    AA=A;DP=125     GT:GQ:DP        0|1:100:27      0|1:100:26      0|0:100:71
+2      41613866        rs4597576       C       T       .       PASS    AA=T;DP=135     GT:GQ:DP        0|1:100:27      0|1:100:26      0|0:100:85
+10     111336976       rs2488933       G       A       .       PASS    AA=G;DP=124     GT:GQ:DP        0|1:100:27      0|1:100:27      0|0:100:72
+2      157508962       .       G       C       .       PASS    AA=G;DP=128     GT:GQ:DP        0|1:100:27      0|1:100:27      0|0:100:75
+2      80089762        rs423412        A       G       .       PASS    AA=A;DP=147     GT:GQ:DP        0|1:100:27      0|1:100:27      0|0:100:82
+6      89045806        rs9362478       C       T       .       PASS    AA=C;DP=119     GT:GQ:DP        0|1:100:27      0|1:100:28      0|0:100:64
+2      25798175        rs6706535       T       C       .       PASS    AA=T;DP=131     GT:GQ:DP        0|1:100:27      0|1:100:29      0|0:100:75
+12     28689300        rs11049762      T       G       .       PASS    AA=T;DP=133     GT:GQ:DP        0|1:100:27      0|1:100:29      0|0:100:79
+7      48273627        rs1526096       T       C       .       PASS    AA=C;DP=134     GT:GQ:DP        0|1:100:27      0|1:100:30      0|0:100:38
+3      187599258       rs4524273       C       G       .       PASS    AA=c;DP=127     GT:GQ:DP        0|1:100:27      0|1:100:30      0|0:66:25
+7      23777042        rs7785154       G       A       .       PASS    AA=A;DP=140     GT:GQ:DP        0|1:100:27      0|1:100:31      0|0:100:36
+2      21251066        rs531380        C       G       .       PASS    AA=G;DP=121     GT:GQ:DP        0|1:100:27      0|1:100:31      0|0:100:61
+2      150343759       rs1608978       A       G       .       PASS    AA=A;DP=147     GT:GQ:DP        0|1:100:27      0|1:100:38      0|0:100:44
+1      16435555        rs6603850       C       A       .       PASS    AA=A;DP=126;HM3 GT:GQ:DP        0|1:100:27      0|1:19:14       0|0:100:87
+14     31453574        rs9972242       T       C       .       PASS    AA=T;DP=93      GT:GQ:DP        0|1:100:27      0|1:20:15       0|0:100:51
+10     109135574       rs4918301       G       T       .       PASS    AA=G;DP=112     GT:GQ:DP        0|1:100:27      0|1:23:18       0|0:100:70
+21     33095645        rs2833961       G       T       .       PASS    AA=T;DP=118     GT:GQ:DP        0|1:100:27      0|1:25:12       0|0:100:81
+7      26564556        rs4722610       C       G       .       PASS    AA=G;DP=110     GT:GQ:DP        0|1:100:27      0|1:40:14       0|0:100:73
+5      1787688 rs6876537       C       A       .       PASS    AA=A;DP=84      GT:GQ:DP        0|1:100:27      0|1:44:5        0|0:96:44
+2      103946935       rs12613775      C       T       .       PASS    AA=C;DP=121     GT:GQ:DP        0|1:100:27      0|1:45:14       0|0:100:81
+2      88122215        rs6735706       G       C       .       PASS    AA=G;DP=109     GT:GQ:DP        0|1:100:27      0|1:51:14       0|0:100:67
+20     48221552        rs11698901      C       T       .       PASS    AA=C;DP=134     GT:GQ:DP        0|1:100:27      0|1:52:26       0|0:100:39
+13     84375268        rs7139558       T       C       .       PASS    AA=C;DP=115     GT:GQ:DP        0|1:100:27      0|1:55:19       0|0:100:72
+4      40425577        rs790143        A       G       .       PASS    AA=a;DP=107     GT:GQ:DP        0|1:100:27      0|1:57:14       0|0:100:67
+8      131591727       rs10283089      A       G       .       PASS    AA=A;DP=121     GT:GQ:DP        0|1:100:27      0|1:57:22       0|0:100:60
+11     130433886       rs10791119      A       T       .       PASS    AA=A;DP=100     GT:GQ:DP        0|1:100:27      0|1:60:16       0|0:100:57
+1      206201793       .       C       A       .       PASS    AA=c;DP=103     GT:GQ:DP        0|1:100:27      0|1:64:22       0|0:82:57
+11     5791510 rs4758427       C       T       .       PASS    AA=c;DP=126     GT:GQ:DP        0|1:100:27      0|1:65:19       0|0:100:37
+4      178042521       rs10032219      C       T       .       PASS    AA=C;DP=111     GT:GQ:DP        0|1:100:27      0|1:65:20       0|0:100:65
+21     44925450        rs1883042       T       C       .       PASS    AA=T;DP=111     GT:GQ:DP        0|1:100:27      0|1:66:26       0|0:100:58
+2      197644587       rs13414451      C       T       .       PASS    AA=c;DP=88      GT:GQ:DP        0|1:100:27      0|1:67:9        0|0:100:53
+9      121410290       .       G       A       .       PASS    AA=G;DP=107     GT:GQ:DP        0|1:100:27      0|1:68:18       0|0:100:62
+10     129494150       rs7908141       C       T       .       PASS    AA=T;DP=120     GT:GQ:DP        0|1:100:27      0|1:70:21       0|0:100:73
+10     58522585        rs3105347       T       G       .       PASS    AA=G;DP=129     GT:GQ:DP        0|1:100:27      0|1:70:23       0|0:100:79
+10     116112443       rs7907030       T       C       .       PASS    AA=T;DP=115     GT:GQ:DP        0|1:100:27      0|1:71:17       0|0:100:72
+5      171727185       rs2569240       G       A       .       PASS    AA=A;DP=107     GT:GQ:DP        0|1:100:27      0|1:73:16       0|0:100:65
+14     27440090        rs8009029       C       T       .       PASS    AA=C;DP=118     GT:GQ:DP        0|1:100:27      0|1:73:23       0|0:100:70
+11     90471077        rs1528739       A       G       .       PASS    AA=a;DP=109     GT:GQ:DP        0|1:100:27      0|1:75:26       0|0:100:60
+3      168737897       rs7433123       G       T       .       PASS    AA=.;DP=89      GT:GQ:DP        0|1:100:27      0|1:76:15       0|0:100:49
+2      216350006       rs1403327       C       T       .       PASS    AA=T;DP=123     GT:GQ:DP        0|1:100:27      0|1:78:31       0|0:100:67
+15     69160092        rs920531        C       T       .       PASS    AA=T;DP=115     GT:GQ:DP        0|1:100:27      0|1:79:20       0|0:100:65
+8      143580923       .       G       T       .       PASS    AA=-;DP=103     GT:GQ:DP        0|1:100:27      0|1:7:24        0|0:100:51
+18     72210672        rs678704        C       T       .       PASS    AA=T;DP=130     GT:GQ:DP        0|1:100:27      0|1:80:20       0|0:100:45
+7      7741960 rs12154665      A       G       .       PASS    AA=N;DP=131     GT:GQ:DP        0|1:100:27      0|1:80:23       0|0:100:83
+2      6679847 .       T       G       .       PASS    AA=t;DP=126     GT:GQ:DP        0|1:100:27      0|1:81:27       0|0:100:71
+14     102492264       rs10131251      A       G       .       PASS    AA=G;DP=153     GT:GQ:DP        0|1:100:27      0|1:81:28       0|0:100:53
+14     103543006       rs4900607       A       G       .       PASS    AA=G;DP=98      GT:GQ:DP        0|1:100:27      0|1:83:21       0|0:100:50
+6      96479061        rs685476        A       G       .       PASS    AA=A;DP=113     GT:GQ:DP        0|1:100:27      0|1:86:23       0|0:100:56
+5      86494233        rs254650        G       A       .       PASS    AA=g;DP=104     GT:GQ:DP        0|1:100:27      0|1:89:23       0|0:100:56
+11     122476668       rs11218981      G       A       .       PASS    AA=A;DP=154     GT:GQ:DP        0|1:100:27      0|1:90:24       0|0:100:53
+2      198959455       rs2467045       T       C       .       PASS    AA=C;DP=145     GT:GQ:DP        0|1:100:27      0|1:91:23       0|0:100:45
+6      1529383 rs2816226       C       A       .       PASS    AA=A;DP=139     GT:GQ:DP        0|1:100:27      0|1:94:24       0|0:100:44
+4      91757869        rs10003352      C       G       .       PASS    AA=C;DP=114     GT:GQ:DP        0|1:100:27      0|1:99:18       0|0:100:58
+3      164402545       rs2131141       T       C       .       PASS    AA=T;DP=116     GT:GQ:DP        0|1:100:27      1|1:13:16       0|1:100:74
+4      164999601       rs978401        T       A       .       PASS    AA=t;DP=128     GT:GQ:DP        0|1:100:27      1|1:14:15       0|1:100:40
+3      183936576       rs55981093      G       A       .       PASS    AA=A;DP=113     GT:GQ:DP        0|1:100:27      1|1:15:16       0|1:100:69
+5      173071395       rs2546718       G       A       .       PASS    AA=g;DP=131     GT:GQ:DP        0|1:100:27      1|1:18:19       0|1:100:88
+16     1800432 rs2516314       G       C       .       PASS    AA=C;DP=92      GT:GQ:DP        0|1:100:27      1|1:18:7        0|1:100:59
+19     34619196        rs881271        A       C       .       PASS    AA=A;DP=125     GT:GQ:DP        0|1:100:27      1|1:20:20       0|1:100:78
+11     33211996        rs6484651       A       T       .       PASS    AA=A;DP=77      GT:GQ:DP        0|1:100:27      1|1:21:9        0|1:100:38
+6      34965634        rs13218101      T       C       .       PASS    AA=C;DP=99      GT:GQ:DP        0|1:100:27      1|1:24:10       0|1:100:62
+2      32330496        rs410469        T       G       .       PASS    AA=G;DP=119     GT:GQ:DP        0|1:100:27      1|1:24:20       0|1:100:67
+16     67121010        rs1645976       T       C       .       PASS    AA=T;DP=143     GT:GQ:DP        0|1:100:27      1|1:27:24       0|1:100:92
+3      14388400        rs4685143       C       T       .       PASS    AA=c;DP=119     GT:GQ:DP        0|1:100:27      1|1:28:17       0|1:100:75
+13     109680101       rs633388        C       G       .       PASS    AA=C;DP=96      GT:GQ:DP        0|1:100:27      1|1:29:14       0|1:100:41
+2      62513246        rs7565557       A       G       .       PASS    AA=A;DP=116     GT:GQ:DP        0|1:100:27      1|1:30:12       0|1:100:78
+9      4960844 rs1887426       C       A       .       PASS    AA=A;DP=153     GT:GQ:DP        0|1:100:27      1|1:35:24       0|1:100:97
+4      39387823        rs302937        C       T       .       PASS    AA=T;DP=92      GT:GQ:DP        0|1:100:27      1|1:36:13       0|1:100:52
+2      115069506       rs1965088       T       G       .       PASS    AA=G;DP=85      GT:GQ:DP        0|1:100:27      1|1:39:15       0|1:100:46
+11     28000967        rs11030187      T       G       .       PASS    AA=G;DP=107     GT:GQ:DP        0|1:100:27      1|1:41:26       0|1:100:58
+8      57756431        rs7015033       T       C       .       PASS    AA=C;DP=95      GT:GQ:DP        0|1:100:27      1|1:42:15       0|1:100:53
+14     49755114        .       G       C       .       PASS    AA=C;DP=115     GT:GQ:DP        0|1:100:27      1|1:42:16       0|1:100:73
+8      14156143        rs10099360      A       C       .       PASS    AA=C;DP=98      GT:GQ:DP        0|1:100:27      1|1:43:29       0|1:100:30
+7      131480626       rs2598198       C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        0|1:100:27      1|1:45:16       0|1:100:67
+7      66531333        rs62465191      C       T       .       PASS    AA=t;DP=118     GT:GQ:DP        0|1:100:27      1|1:45:18       0|1:100:73
+2      179199480       rs16866420      T       G       .       PASS    AA=G;DP=102     GT:GQ:DP        0|1:100:27      1|1:45:21       0|1:100:56
+5      116278925       rs987323        C       G       .       PASS    AA=G;DP=126     GT:GQ:DP        0|1:100:27      1|1:47:28       0|1:100:71
+7      137225068       rs6467722       C       T       .       PASS    AA=C;DP=118     GT:GQ:DP        0|1:100:27      1|1:48:17       0|1:100:79
+1      105737518       rs11184549      G       A       .       PASS    AA=A;DP=97;HM2  GT:GQ:DP        0|1:100:27      1|1:48:18       0|1:100:54
+7      68780393        rs2533428       G       C       .       PASS    AA=C;DP=116     GT:GQ:DP        0|1:100:27      1|1:48:18       0|1:100:69
+10     30253710        rs7071614       G       A       .       PASS    AA=A;DP=119     GT:GQ:DP        0|1:100:27      1|1:48:18       0|1:100:75
+4      4979140 rs13103416      C       T       .       PASS    AA=C;DP=109     GT:GQ:DP        0|1:100:27      1|1:48:19       0|1:100:61
+2      699119  rs4854272       G       A       .       PASS    AA=G;DP=126     GT:GQ:DP        0|1:100:27      1|1:48:19       0|1:100:82
+1      54330689        rs4926619       T       C       .       PASS    AA=C;DP=115;HM2 GT:GQ:DP        0|1:100:27      1|1:51:18       0|1:100:70
+8      91255894        rs10956500      C       T       .       PASS    AA=T;DP=127     GT:GQ:DP        0|1:100:27      1|1:51:18       0|1:100:76
+13     25467830        rs9578949       A       G       .       PASS    AA=A;DP=87      GT:GQ:DP        0|1:100:27      1|1:51:21       0|1:100:28
+18     4200326 rs1402633       A       G       .       PASS    AA=A;DP=129     GT:GQ:DP        0|1:100:27      1|1:51:25       0|1:100:78
+1      216350679       rs1873326       C       T       .       PASS    AA=T;DP=131;HM2 GT:GQ:DP        0|1:100:27      1|1:54:19       0|1:100:28
+3      116126935       rs260186        T       C       .       PASS    AA=N;DP=106     GT:GQ:DP        0|1:100:27      1|1:54:19       0|1:100:61
+2      160993212       rs12477746      G       A       .       PASS    AA=A;DP=89      GT:GQ:DP        0|1:100:27      1|1:54:20       0|1:100:42
+3      145067634       rs6799314       A       G       .       PASS    AA=G;DP=100     GT:GQ:DP        0|1:100:27      1|1:57:20       0|1:100:53
+2      1715004 rs6711059       C       T       .       PASS    AA=T;DP=110     GT:GQ:DP        0|1:100:27      1|1:57:20       0|1:100:64
+2      122494730       rs17007114      C       G       .       PASS    AA=C;DP=122     GT:GQ:DP        0|1:100:27      1|1:57:20       0|1:100:77
+2      56360577        rs4287805       G       A       .       PASS    AA=A;DP=90      GT:GQ:DP        0|1:100:27      1|1:57:21       0|1:100:41
+12     50375524        rs4761830       A       G       .       PASS    AA=G;DP=114     GT:GQ:DP        0|1:100:27      1|1:59:25       0|1:100:66
+10     3106052 rs11251696      C       T       .       PASS    AA=c;DP=95      GT:GQ:DP        0|1:100:27      1|1:5:11        0|1:100:57
+1      4474861 rs1710424       A       G       .       PASS    AA=G;DP=145;HM2 GT:GQ:DP        0|1:100:27      1|1:60:25       0|1:100:56
+6      9009593 rs2209121       G       A       .       PASS    AA=A;DP=122     GT:GQ:DP        0|1:100:27      1|1:61:33       0|1:100:65
+3      181268415       rs7641619       T       C       .       PASS    AA=T;DP=105     GT:GQ:DP        0|1:100:27      1|1:63:22       0|1:100:56
+3      178054689       rs6443389       C       T       .       PASS    AA=T;DP=113     GT:GQ:DP        0|1:100:27      1|1:63:22       0|1:100:66
+1      102921350       rs1451034       T       C       .       PASS    AA=C;DP=88      GT:GQ:DP        0|1:100:27      1|1:63:23       0|1:100:38
+8      26319177        rs7813520       C       T       .       PASS    AA=T;DP=131     GT:GQ:DP        0|1:100:27      1|1:64:31       0|1:100:74
+12     2880471 rs12814976      T       C       .       PASS    AA=T;DP=127     GT:GQ:DP        0|1:100:27      1|1:66:23       0|1:100:77
+9      134024223       rs7859774       G       A       .       PASS    AA=A;DP=98      GT:GQ:DP        0|1:100:27      1|1:66:26       0|1:100:46
+18     71417056        rs10439003      T       C       .       PASS    AA=T;DP=139     GT:GQ:DP        0|1:100:27      1|1:67:29       0|1:100:82
+7      54673346        rs13229756      A       G       .       PASS    AA=a;DP=133     GT:GQ:DP        0|1:100:27      1|1:69:24       0|1:100:82
+6      12572096        rs9381177       T       C       .       PASS    AA=T;DP=103     GT:GQ:DP        0|1:100:27      1|1:69:26       0|1:100:37
+12     64192088        rs12300613      A       C       .       PASS    AA=C;DP=129     GT:GQ:DP        0|1:100:27      1|1:72:25       0|1:100:77
+18     71263536        rs11662154      T       A       .       PASS    AA=A;DP=128     GT:GQ:DP        0|1:100:27      1|1:72:33       0|1:100:65
+5      11609824        rs2530908       C       T       .       PASS    AA=C;DP=113     GT:GQ:DP        0|1:100:27      1|1:75:26       0|1:100:59
+14     50477330        rs1890706       C       T       .       PASS    AA=T;DP=107     GT:GQ:DP        0|1:100:27      1|1:81:28       0|1:100:52
+18     66666987        rs12953787      A       G       .       PASS    AA=A;DP=127     GT:GQ:DP        0|1:100:27      1|1:81:28       0|1:100:72
+7      133934572       .       G       A       .       PASS    AA=G;DP=143     GT:GQ:DP        0|1:100:27      1|1:84:30       0|1:100:85
+12     88520876        .       T       C       .       PASS    AA=T;DP=143     GT:GQ:DP        0|1:100:28      0|0:100:32      0|0:100:37
+7      21733804        rs2965383       C       T       .       PASS    AA=C;DP=152     GT:GQ:DP        0|1:100:28      0|0:100:33      0|0:100:39
+7      147905991       .       G       A       .       PASS    AA=G;DP=149     GT:GQ:DP        0|1:100:28      0|0:100:33      0|0:100:53
+3      100189021       rs6440280       A       G       .       PASS    AA=A;DP=116     GT:GQ:DP        0|1:100:28      0|0:100:33      0|0:100:55
+10     2801624 .       A       G       .       PASS    AA=A;DP=122     GT:GQ:DP        0|1:100:28      0|0:100:33      0|0:100:63
+7      108445751       rs660434        T       G       .       PASS    AA=T;DP=134     GT:GQ:DP        0|1:100:28      0|0:100:33      0|0:100:68
+1      119208283       rs1766807       A       G       .       PASS    AA=A;DP=134;HM2;HM3     GT:GQ:DP        0|1:100:28      0|0:100:33      0|0:100:75
+10     69210906        rs12412919      G       A       .       PASS    AA=G;DP=163     GT:GQ:DP        0|1:100:28      0|0:100:34      0|0:100:51
+8      104392752       rs10505042      C       T       .       PASS    AA=C;DP=165     GT:GQ:DP        0|1:100:28      0|0:100:35      0|0:100:53
+5      175519136       .       G       A       .       PASS    AA=G;DP=135     GT:GQ:DP        0|1:100:28      0|0:100:35      0|0:100:68
+3      194953727       .       A       G       .       PASS    AA=A;DP=143     GT:GQ:DP        0|1:100:28      0|0:100:35      0|0:100:81
+16     76647770        .       G       C       .       PASS    AA=g;DP=149     GT:GQ:DP        0|1:100:28      0|0:100:35      0|0:100:84
+5      116970822       .       C       T       .       PASS    AA=T;DP=159     GT:GQ:DP        0|1:100:28      0|0:100:36      0|0:100:52
+6      23014923        rs2480010       A       G       .       PASS    AA=A;DP=169     GT:GQ:DP        0|1:100:28      0|0:100:36      0|0:100:52
+17     36210587        rs35524062      C       T       .       PASS    AA=C;DP=166     GT:GQ:DP        0|1:100:28      0|0:100:37      0|0:100:88
+14     30487810        rs61976775      A       T       .       PASS    AA=A;DP=126     GT:GQ:DP        0|1:100:28      0|0:100:39      0|0:100:58
+4      20576568        .       A       G       .       PASS    AA=A;DP=129     GT:GQ:DP        0|1:100:28      0|0:100:40      0|0:100:62
+8      60057918        .       A       G       .       PASS    AA=A;DP=159     GT:GQ:DP        0|1:100:28      0|0:100:43      0|0:100:85
+10     13218703        rs10906310      C       A       .       PASS    AA=A;DP=122     GT:GQ:DP        0|1:100:28      0|0:11:13       0|0:90:36
+20     59945804        rs6142888       C       A       .       PASS    AA=C;DP=91      GT:GQ:DP        0|1:100:28      0|0:17:4        0|0:100:60
+7      2657727 rs798479        C       A       .       PASS    AA=C;DP=112     GT:GQ:DP        0|1:100:28      0|0:21:12       0|0:100:72
+1      76980905        rs61783160      T       G       .       PASS    AA=G;DP=104     GT:GQ:DP        0|1:100:28      0|0:21:16       0|0:100:61
+X      655846  rs4911898       G       A       .       PASS    AA=g;DP=74      GT:GQ:DP        0|1:100:28      0|0:23:6        0|0:99:35
+8      143001630       rs7005204       G       A       .       PASS    AA=G;DP=106     GT:GQ:DP        0|1:100:28      0|0:26:11       0|0:100:68
+15     33873201        rs2132984       A       C       .       PASS    AA=A;DP=92      GT:GQ:DP        0|1:100:28      0|0:27:18       0|0:100:48
+2      10388465        rs6716188       G       A       .       PASS    AA=A;DP=119     GT:GQ:DP        0|1:100:28      0|0:29:17       0|0:100:74
+X      1978137 rs28881941      C       A       .       PASS    AA=.;DP=95      GT:GQ:DP        0|1:100:28      0|0:29:19       0|0:100:47
+10     1047838 rs2127604       G       A       .       PASS    AA=G;DP=87      GT:GQ:DP        0|1:100:28      0|0:29:8        0|0:100:43
+5      144041263       rs11747541      G       C       .       PASS    AA=G;DP=93      GT:GQ:DP        0|1:100:28      0|0:30:10       0|0:100:54
+10     57517336        rs1500762       T       C       .       PASS    AA=T;DP=108     GT:GQ:DP        0|1:100:28      0|0:30:17       0|0:100:62
+8      125433180       rs10102946      A       T       .       PASS    AA=A;DP=116     GT:GQ:DP        0|1:100:28      0|0:34:19       0|0:100:70
+13     111106922       rs28587834      C       T       .       PASS    AA=-;DP=112     GT:GQ:DP        0|1:100:28      0|0:35:11       0|0:100:73
+4      7275162 rs62289684      A       G       .       PASS    AA=A;DP=121     GT:GQ:DP        0|1:100:28      0|0:36:19       0|0:100:69
+17     18065238        rs12451754      C       T       .       PASS    AA=C;DP=113     GT:GQ:DP        0|1:100:28      0|0:37:18       0|0:100:67
+12     33062938        rs12827954      A       G       .       PASS    AA=G;DP=103     GT:GQ:DP        0|1:100:28      0|0:38:11       0|0:100:64
+7      148012712       .       G       A       .       PASS    AA=G;DP=108     GT:GQ:DP        0|1:100:28      0|0:38:13       0|0:100:67
+15     58398917        rs59364753      T       A       .       PASS    AA=T;DP=130     GT:GQ:DP        0|1:100:28      0|0:38:22       0|0:100:40
+4      96744637        .       A       T       .       PASS    AA=A;DP=94      GT:GQ:DP        0|1:100:28      0|0:39:17       0|0:100:49
+8      8236876 .       G       A       .       PASS    AA=G;DP=88      GT:GQ:DP        0|1:100:28      0|0:40:15       0|0:90:33
+5      12672997        .       C       T       .       PASS    AA=c;DP=97      GT:GQ:DP        0|1:100:28      0|0:40:20       0|0:100:48
+22     31003459        rs5753911       G       T       .       PASS    AA=G;DP=84      GT:GQ:DP        0|1:100:28      0|0:41:12       0|0:100:45
+2      132934720       rs10180610      A       T       .       PASS    AA=A;DP=118     GT:GQ:DP        0|1:100:28      0|0:41:13       0|0:100:64
+11     12501149        rs4756918       G       A       .       PASS    AA=G;DP=104     GT:GQ:DP        0|1:100:28      0|0:41:14       0|0:100:63
+2      205942691       rs7602958       G       A       .       PASS    AA=A;DP=127     GT:GQ:DP        0|1:100:28      0|0:41:22       0|0:100:77
+19     15131059        rs4809026       G       C       .       PASS    AA=G;DP=127     GT:GQ:DP        0|1:100:28      0|0:43:24       0|0:100:79
+11     63440044        rs13377315      G       C       .       PASS    AA=G;DP=110     GT:GQ:DP        0|1:100:28      0|0:44:13       0|0:100:67
+18     27104481        rs6506907       C       T       .       PASS    AA=t;DP=118     GT:GQ:DP        0|1:100:28      0|0:44:13       0|0:100:72
+22     35436333        .       C       T       .       PASS    AA=c;DP=93      GT:GQ:DP        0|1:100:28      0|0:44:14       0|0:100:51
+2      10581253        .       G       A       .       PASS    AA=G;DP=102     GT:GQ:DP        0|1:100:28      0|0:44:14       0|0:100:53
+12     104693304       rs9634187       T       C       .       PASS    AA=T;DP=114     GT:GQ:DP        0|1:100:28      0|0:44:14       0|0:100:71
+9      132325716       rs1215984       C       T       .       PASS    AA=C;DP=112     GT:GQ:DP        0|1:100:28      0|0:44:14       0|0:100:72
+2      143722696       .       G       T       .       PASS    AA=G;DP=128     GT:GQ:DP        0|1:100:28      0|0:44:24       0|0:81:36
+5      124718315       rs2408333       G       T       .       PASS    AA=T;DP=115     GT:GQ:DP        0|1:100:28      0|0:44:26       0|0:100:60
+9      2032685 .       G       T       .       PASS    AA=A;DP=113     GT:GQ:DP        0|1:100:28      0|0:45:17       0|0:100:72
+14     32830537        .       A       T       .       PASS    AA=A;DP=107     GT:GQ:DP        0|1:100:28      0|0:46:25       0|0:100:44
+20     6939406 .       A       G       .       PASS    AA=A;DP=93      GT:GQ:DP        0|1:100:28      0|0:47:14       0|0:100:51
+3      130480108       rs7429388       G       A       .       PASS    AA=G;DP=100     GT:GQ:DP        0|1:100:28      0|0:47:14       0|0:100:58
+19     39283595        rs11084756      C       T       .       PASS    AA=C;DP=107     GT:GQ:DP        0|1:100:28      0|0:47:14       0|0:100:65
+17     6540099 .       C       T       .       PASS    AA=C;DP=142     GT:GQ:DP        0|1:100:28      0|0:47:14       0|0:93:44
+1      43841382        rs6672061       A       T       .       PASS    AA=A;DP=128     GT:GQ:DP        0|1:100:28      0|0:47:15       0|0:100:86
+20     23652288        rs6132653       C       A       .       PASS    AA=a;DP=122     GT:GQ:DP        0|1:100:28      0|0:47:22       0|0:100:72
+2      130827113       rs7558521       G       A       .       PASS    AA=g;DP=81      GT:GQ:DP        0|1:100:28      0|0:50:15       0|0:100:34
+11     76149841        .       G       A       .       PASS    AA=G;DP=103     GT:GQ:DP        0|1:100:28      0|0:50:15       0|0:100:44
+3      135868254       .       C       T       .       PASS    AA=C;DP=96      GT:GQ:DP        0|1:100:28      0|0:50:15       0|0:100:53
+11     42938732        rs4562819       G       C       .       PASS    AA=G;DP=101     GT:GQ:DP        0|1:100:28      0|0:50:15       0|0:100:57
+15     59610744        .       C       G       .       PASS    AA=C;DP=104     GT:GQ:DP        0|1:100:28      0|0:50:15       0|0:100:61
+17     62335253        rs9913554       G       A       .       PASS    AA=G;DP=120     GT:GQ:DP        0|1:100:28      0|0:50:15       0|0:100:76
+7      127419541       .       A       T       .       PASS    AA=A;DP=124     GT:GQ:DP        0|1:100:28      0|0:50:15       0|0:100:80
+19     38801149        .       T       C       .       PASS    AA=t;DP=107     GT:GQ:DP        0|1:100:28      0|0:50:16       0|0:100:64
+11     1632183 rs7950561       G       A       .       PASS    AA=.;DP=120     GT:GQ:DP        0|1:100:28      0|0:50:16       0|0:100:74
+11     57557686        rs2514186       A       C       .       PASS    AA=A;DP=124     GT:GQ:DP        0|1:100:28      0|0:50:16       0|0:100:80
+2      121571785       rs13419952      C       T       .       PASS    AA=C;DP=135     GT:GQ:DP        0|1:100:28      0|0:50:16       0|0:100:96
+6      168176068       .       C       T       .       PASS    AA=C;DP=114     GT:GQ:DP        0|1:100:28      0|0:50:17       0|0:100:69
+10     7571753 rs12414739      C       T       .       PASS    AA=T;DP=119     GT:GQ:DP        0|1:100:28      0|0:50:17       0|0:100:73
+20     33347800        .       A       G       .       PASS    AA=A;DP=123     GT:GQ:DP        0|1:100:28      0|0:50:17       0|0:100:79
+3      41876061        .       C       T       .       PASS    AA=c;DP=114     GT:GQ:DP        0|1:100:28      0|0:50:18       0|0:100:68
+3      2078250 .       G       A       .       PASS    AA=g;DP=96      GT:GQ:DP        0|1:100:28      0|0:50:23       0|0:100:45
+8      77223536        rs16939245      C       A       .       PASS    AA=C;DP=125     GT:GQ:DP        0|1:100:28      0|0:50:23       0|0:100:76
+X      2846238 .       G       A       .       PASS    AA=g;DP=119     GT:GQ:DP        0|1:100:28      0|0:53:16       0|0:100:36
+13     46030051        rs9595488       G       A       .       PASS    AA=g;DP=125     GT:GQ:DP        0|1:100:28      0|0:53:16       0|0:100:81
+8      125356531       rs41327151      G       T       .       PASS    AA=G;DP=139     GT:GQ:DP        0|1:100:28      0|0:53:16       0|0:100:89
+15     50859038        rs2440322       T       G       .       PASS    AA=T;DP=132     GT:GQ:DP        0|1:100:28      0|0:53:17       0|0:100:43
+20     714083  rs648656        T       G       .       PASS    AA=t;DP=108     GT:GQ:DP        0|1:100:28      0|0:53:18       0|0:100:64
+6      145115950       rs17074125      C       A       .       PASS    AA=C;DP=127     GT:GQ:DP        0|1:100:28      0|0:54:31       0|0:100:70
+2      57258192        .       C       T       .       PASS    AA=C;DP=134     GT:GQ:DP        0|1:100:28      0|0:55:23       0|0:100:41
+12     27248405        rs7309969       A       C       .       PASS    AA=N;DP=155     GT:GQ:DP        0|1:100:28      0|0:55:28       0|0:100:54
+10     86979292        rs7093980       A       G       .       PASS    AA=A;DP=123     GT:GQ:DP        0|1:100:28      0|0:55:28       0|0:100:67
+3      4166172 rs973177        A       C       .       PASS    AA=A;DP=141     GT:GQ:DP        0|1:100:28      0|0:55:28       0|0:100:72
+4      121591208       rs55637801      G       T       .       PASS    AA=G;DP=136     GT:GQ:DP        0|1:100:28      0|0:56:17       0|0:100:38
+2      57425914        rs10199351      A       C       .       PASS    AA=A;DP=87      GT:GQ:DP        0|1:100:28      0|0:56:17       0|0:100:43
+3      87590325        rs6551489       C       T       .       PASS    AA=C;DP=104     GT:GQ:DP        0|1:100:28      0|0:56:17       0|0:100:60
+11     76205446        rs7930972       C       T       .       PASS    AA=T;DP=110     GT:GQ:DP        0|1:100:28      0|0:56:17       0|0:100:65
+9      100140943       .       C       T       .       PASS    AA=T;DP=116     GT:GQ:DP        0|1:100:28      0|0:56:17       0|0:100:68
+4      120355583       rs10033031      G       A       .       PASS    AA=A;DP=118     GT:GQ:DP        0|1:100:28      0|0:56:17       0|0:100:73
+20     56592051        rs6026373       T       C       .       PASS    AA=T;DP=120     GT:GQ:DP        0|1:100:28      0|0:56:17       0|0:100:78
+7      49217050        rs4132513       A       C       .       PASS    AA=C;DP=124     GT:GQ:DP        0|1:100:28      0|0:56:17       0|0:100:78
+14     50832805        rs4132065       G       A       .       PASS    AA=G;DP=93      GT:GQ:DP        0|1:100:28      0|0:56:18       0|0:100:47
+21     37909767        rs2835833       G       A       .       PASS    AA=G;DP=146     GT:GQ:DP        0|1:100:28      0|0:56:18       0|0:100:52
+3      192513568       rs9855244       C       T       .       PASS    AA=C;DP=117     GT:GQ:DP        0|1:100:28      0|0:57:22       0|0:100:66
+7      76757968        rs57159358      G       T       .       PASS    AA=T;DP=98      GT:GQ:DP        0|1:100:28      0|0:58:24       0|0:100:46
+6      162891176       rs9456789       G       A       .       PASS    AA=A;DP=129     GT:GQ:DP        0|1:100:28      0|0:58:24       0|0:100:78
+2      159984283       rs1030150       T       C       .       PASS    AA=T;DP=116     GT:GQ:DP        0|1:100:28      0|0:58:29       0|0:100:58
+13     57945953        .       C       T       .       PASS    AA=C;DP=118     GT:GQ:DP        0|1:100:28      0|0:58:29       0|0:100:61
+7      24623556        .       T       C       .       PASS    AA=T;DP=143     GT:GQ:DP        0|1:100:28      0|0:59:18       0|0:100:37
+9      90682107        rs17510397      T       C       .       PASS    AA=T;DP=91      GT:GQ:DP        0|1:100:28      0|0:59:18       0|0:100:46
+8      32780552        .       T       A       .       PASS    AA=T;DP=96      GT:GQ:DP        0|1:100:28      0|0:59:18       0|0:100:51
+12     30297212        rs10843678      A       G       .       PASS    AA=A;DP=102     GT:GQ:DP        0|1:100:28      0|0:59:18       0|0:100:58
+11     95092375        rs7112052       A       G       .       PASS    AA=a;DP=109     GT:GQ:DP        0|1:100:28      0|0:59:18       0|0:100:64
+2      41044067        .       T       A       .       PASS    AA=T;DP=114     GT:GQ:DP        0|1:100:28      0|0:59:18       0|0:100:65
+8      127069972       rs10109175      C       T       .       PASS    AA=C;DP=117     GT:GQ:DP        0|1:100:28      0|0:59:18       0|0:100:71
+11     122864518       rs2846318       G       A       .       PASS    AA=G;DP=128     GT:GQ:DP        0|1:100:28      0|0:59:18       0|0:100:85
+1      66170875        rs61498597      G       C       .       PASS    AA=G;DP=124     GT:GQ:DP        0|1:100:28      0|0:59:18       0|0:96:33
+18     48149442        .       G       A       .       PASS    AA=G;DP=107     GT:GQ:DP        0|1:100:28      0|0:59:19       0|0:100:63
+3      142407132       .       C       T       .       PASS    AA=N;DP=121     GT:GQ:DP        0|1:100:28      0|0:59:19       0|0:100:73
+5      164814247       .       C       T       .       PASS    AA=C;DP=92      GT:GQ:DP        0|1:100:28      0|0:59:19       0|0:99:33
+13     103341772       .       G       A       .       PASS    AA=G;DP=105     GT:GQ:DP        0|1:100:28      0|0:59:21       0|0:100:58
+12     94294963        rs1553596       A       C       .       PASS    AA=A;DP=124     GT:GQ:DP        0|1:100:28      0|0:59:21       0|0:100:78
+13     41927127        .       G       A       .       PASS    AA=G;DP=132     GT:GQ:DP        0|1:100:28      0|0:60:30       0|0:100:72
+11     91906777        rs4753063       G       A       .       PASS    AA=G;DP=105     GT:GQ:DP        0|1:100:28      0|0:62:19       0|0:100:56
+2      206058525       rs9288365       G       T       .       PASS    AA=G;DP=111     GT:GQ:DP        0|1:100:28      0|0:62:19       0|0:100:66
+2      104742421       .       A       C       .       PASS    AA=A;DP=114     GT:GQ:DP        0|1:100:28      0|0:62:19       0|0:100:69
+10     27736778        rs7076204       A       G       .       PASS    AA=a;DP=118     GT:GQ:DP        0|1:100:28      0|0:62:19       0|0:100:71
+2      192074542       .       C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        0|1:100:28      0|0:62:19       0|0:100:73
+10     64151966        .       A       G       .       PASS    AA=A;DP=124     GT:GQ:DP        0|1:100:28      0|0:62:19       0|0:100:77
+6      52444344        .       C       T       .       PASS    AA=C;DP=123     GT:GQ:DP        0|1:100:28      0|0:62:19       0|0:100:78
+12     115477628       rs7979662       C       T       .       PASS    AA=C;DP=114     GT:GQ:DP        0|1:100:28      0|0:62:20       0|0:100:54
+10     10354694        .       C       T       .       PASS    AA=C;DP=113     GT:GQ:DP        0|1:100:28      0|0:62:20       0|0:100:67
+3      125255669       .       C       T       .       PASS    AA=C;DP=117     GT:GQ:DP        0|1:100:28      0|0:62:20       0|0:100:72
+16     3116597 .       A       G       .       PASS    AA=G;DP=108     GT:GQ:DP        0|1:100:28      0|0:62:21       0|0:100:58
+1      149022129       .       G       A       .       PASS    AA=G;DP=114     GT:GQ:DP        0|1:100:28      0|0:62:21       0|0:100:67
+5      36401406        rs60771649      T       C       .       PASS    AA=T;DP=122     GT:GQ:DP        0|1:100:28      0|0:62:21       0|0:100:73
+2      155986797       rs13417606      T       C       .       PASS    AA=T;DP=100     GT:GQ:DP        0|1:100:28      0|0:65:20       0|0:100:54
+11     7599085 .       A       G       .       PASS    AA=A;DP=109     GT:GQ:DP        0|1:100:28      0|0:65:20       0|0:100:62
+5      128753959       rs10074648      C       T       .       PASS    AA=C;DP=119     GT:GQ:DP        0|1:100:28      0|0:65:20       0|0:100:74
+2      35989119        rs2949071       G       A       .       PASS    AA=G;DP=123     GT:GQ:DP        0|1:100:28      0|0:65:20       0|0:100:76
+7      21080695        rs61099789      C       A       .       PASS    AA=C;DP=125     GT:GQ:DP        0|1:100:28      0|0:65:20       0|0:100:77
+14     55524543        .       T       C       .       PASS    AA=T;DP=130     GT:GQ:DP        0|1:100:28      0|0:65:20       0|0:100:79
+7      12256430        .       C       A       .       PASS    AA=C;DP=130     GT:GQ:DP        0|1:100:28      0|0:65:20       0|0:100:81
+12     49405574        rs4768907       A       G       .       PASS    AA=A;DP=152     GT:GQ:DP        0|1:100:28      0|0:65:21       0|0:100:51
+10     90496943        rs12570840      C       T       .       PASS    AA=C;DP=113     GT:GQ:DP        0|1:100:28      0|0:65:21       0|0:100:62
+1      95314423        .       G       A       .       PASS    AA=A;DP=109     GT:GQ:DP        0|1:100:28      0|0:65:22       0|0:100:59
+11     133674227       .       C       T       .       PASS    AA=C;DP=122     GT:GQ:DP        0|1:100:28      0|0:65:25       0|0:100:68
+19     57998659        rs62119624      A       G       .       PASS    AA=a;DP=124     GT:GQ:DP        0|1:100:28      0|0:66:26       0|0:100:70
+14     54113349        .       C       T       .       PASS    AA=C;DP=141     GT:GQ:DP        0|1:100:28      0|0:68:21       0|0:100:50
+8      20334790        rs7830276       G       T       .       PASS    AA=g;DP=103     GT:GQ:DP        0|1:100:28      0|0:68:21       0|0:100:55
+13     85796820        .       A       G       .       PASS    AA=A;DP=111     GT:GQ:DP        0|1:100:28      0|0:68:21       0|0:100:66
+11     50665655        rs11245842      T       C       .       PASS    AA=.;DP=113     GT:GQ:DP        0|1:100:28      0|0:68:21       0|0:100:67
+3      73796445        rs1355468       A       T       .       PASS    AA=T;DP=119     GT:GQ:DP        0|1:100:28      0|0:68:21       0|0:100:72
+14     62960174        rs2144968       G       A       .       PASS    AA=G;DP=121     GT:GQ:DP        0|1:100:28      0|0:68:21       0|0:84:29
+1      84728066        .       T       C       .       PASS    AA=T;DP=132     GT:GQ:DP        0|1:100:28      0|0:68:22       0|0:100:40
+8      4897821 .       A       T       .       PASS    AA=A;DP=136     GT:GQ:DP        0|1:100:28      0|0:68:22       0|0:100:45
+4      39224328        rs9991219       G       A       .       PASS    AA=A;DP=106     GT:GQ:DP        0|1:100:28      0|0:68:22       0|0:100:56
+10     54248767        .       A       T       .       PASS    AA=A;DP=111     GT:GQ:DP        0|1:100:28      0|0:68:22       0|0:100:59
+1      73450974        .       C       G       .       PASS    AA=G;DP=115     GT:GQ:DP        0|1:100:28      0|0:68:22       0|0:100:61
+4      173556337       rs59651020      A       C       .       PASS    AA=A;DP=111     GT:GQ:DP        0|1:100:28      0|0:68:22       0|0:100:61
+10     65301452        rs10995668      A       G       .       PASS    AA=A;DP=124     GT:GQ:DP        0|1:100:28      0|0:68:22       0|0:100:75
+4      166078412       rs59310432      T       A       .       PASS    AA=-;DP=156     GT:GQ:DP        0|1:100:28      0|0:68:23       0|0:100:62
+6      22508369        .       G       A       .       PASS    AA=G;DP=105     GT:GQ:DP        0|1:100:28      0|0:68:29       0|0:100:41
+2      168208635       rs1226906       C       T       .       PASS    AA=T;DP=139     GT:GQ:DP        0|1:100:28      0|0:69:28       0|0:100:39
+8      4978927 .       G       A       .       PASS    AA=G;DP=120     GT:GQ:DP        0|1:100:28      0|0:70:29       0|0:100:61
+1      28123401        .       A       T       .       PASS    AA=A;DP=96      GT:GQ:DP        0|1:100:28      0|0:71:22       0|0:100:34
+20     12259995        rs6033377       G       A       .       PASS    AA=G;DP=125     GT:GQ:DP        0|1:100:28      0|0:71:22       0|0:100:35
+22     32395531        rs16992780      T       C       .       PASS    AA=T;DP=150     GT:GQ:DP        0|1:100:28      0|0:71:22       0|0:100:53
+11     82199635        rs10792647      G       T       .       PASS    AA=G;DP=144     GT:GQ:DP        0|1:100:28      0|0:71:22       0|0:100:54
+22     37403770        rs5757236       T       C       .       PASS    AA=T;DP=103     GT:GQ:DP        0|1:100:28      0|0:71:22       0|0:100:54
+8      117822258       .       T       A       .       PASS    AA=T;DP=108     GT:GQ:DP        0|1:100:28      0|0:71:22       0|0:100:56
+2      123110473       .       T       G       .       PASS    AA=T;DP=140     GT:GQ:DP        0|1:100:28      0|0:71:22       0|0:100:91
+2      100637859       rs9967787       T       C       .       PASS    AA=t;DP=132     GT:GQ:DP        0|1:100:28      0|0:71:22       0|0:96:32
+1      151596094       .       A       G       .       PASS    AA=A;DP=151     GT:GQ:DP        0|1:100:28      0|0:71:23       0|0:100:53
+8      4787787 .       A       G       .       PASS    AA=A;DP=108     GT:GQ:DP        0|1:100:28      0|0:71:23       0|0:100:58
+10     71052129        .       C       T       .       PASS    AA=C;DP=107     GT:GQ:DP        0|1:100:28      0|0:71:23       0|0:100:59
+1      148682255       rs3862206       T       G       .       PASS    AA=T;DP=118;HM2;HM3     GT:GQ:DP        0|1:100:28      0|0:71:23       0|0:100:66
+13     33705437        .       C       G       .       PASS    AA=C;DP=116     GT:GQ:DP        0|1:100:28      0|0:71:23       0|0:100:66
+10     31226266        .       T       C       .       PASS    AA=T;DP=131     GT:GQ:DP        0|1:100:28      0|0:71:23       0|0:100:83
+12     129521967       .       T       C       .       PASS    AA=T;DP=130     GT:GQ:DP        0|1:100:28      0|0:71:24       0|0:100:43
+1      60289790        rs639882        C       G       .       PASS    AA=G;DP=153;HM2;HM3     GT:GQ:DP        0|1:100:28      0|0:71:24       0|0:100:53
+15     59190716        rs782925        C       T       .       PASS    AA=c;DP=149     GT:GQ:DP        0|1:100:28      0|0:71:24       0|0:100:57
+2      20331175        .       G       A       .       PASS    AA=G;DP=149     GT:GQ:DP        0|1:100:28      0|0:71:25       0|0:100:53
+2      218318498       rs10804262      G       A       .       PASS    AA=G;DP=153     GT:GQ:DP        0|1:100:28      0|0:71:31       0|0:100:54
+4      127203422       rs2390948       T       C       .       PASS    AA=T;DP=151     GT:GQ:DP        0|1:100:28      0|0:72:30       0|0:100:53
+10     43919698        rs12268501      G       T       .       PASS    AA=G;DP=127     GT:GQ:DP        0|1:100:28      0|0:72:31       0|0:100:70
+8      75074795        rs60515500      C       A       .       PASS    AA=C;DP=142     GT:GQ:DP        0|1:100:28      0|0:73:30       0|0:100:84
+12     89628921        rs12308248      A       G       .       PASS    AA=A;DP=96      GT:GQ:DP        0|1:100:28      0|0:74:23       0|0:100:37
+8      71693054        rs62531711      T       C       .       PASS    AA=t;DP=136     GT:GQ:DP        0|1:100:28      0|0:74:23       0|0:100:43
+14     97310401        .       G       T       .       PASS    AA=G;DP=107     GT:GQ:DP        0|1:100:28      0|0:74:23       0|0:100:55
+21     14853387        .       A       G       .       PASS    AA=A;DP=110     GT:GQ:DP        0|1:100:28      0|0:74:23       0|0:100:60
+10     4130867 rs10904184      C       G       .       PASS    AA=G;DP=134     GT:GQ:DP        0|1:100:28      0|0:74:23       0|0:100:74
+2      142327113       rs61632456      T       C       .       PASS    AA=T;DP=94      GT:GQ:DP        0|1:100:28      0|0:74:24       0|0:100:42
+4      175534789       rs34400328      T       A       .       PASS    AA=A;DP=132     GT:GQ:DP        0|1:100:28      0|0:74:24       0|0:100:79
+1      244459700       rs6667580       T       G       .       PASS    AA=G;DP=136     GT:GQ:DP        0|1:100:28      0|0:74:30       0|0:100:81
+5      79584272        .       T       C       .       PASS    AA=T;DP=153     GT:GQ:DP        0|1:100:28      0|0:77:24       0|0:100:102
+11     32655402        .       A       G       .       PASS    AA=A;DP=117     GT:GQ:DP        0|1:100:28      0|0:77:24       0|0:100:66
+13     28932813        rs9508464       G       T       .       PASS    AA=G;DP=123     GT:GQ:DP        0|1:100:28      0|0:77:24       0|0:100:73
+9      108527731       rs996856        G       A       .       PASS    AA=G;DP=132     GT:GQ:DP        0|1:100:28      0|0:77:24       0|0:100:79
+19     40082355        rs2545979       G       T       .       PASS    AA=G;DP=110     GT:GQ:DP        0|1:100:28      0|0:77:25       0|0:100:53
+16     58879391        rs12928792      G       A       .       PASS    AA=G;DP=114     GT:GQ:DP        0|1:100:28      0|0:77:25       0|0:100:63
+10     2507484 rs61112584      G       A       .       PASS    AA=G;DP=123     GT:GQ:DP        0|1:100:28      0|0:77:25       0|0:100:67
+14     80341217        rs11847393      G       A       .       PASS    AA=g;DP=99      GT:GQ:DP        0|1:100:28      0|0:77:27       0|0:100:38
+13     96008764        rs9513164       A       G       .       PASS    AA=A;DP=125     GT:GQ:DP        0|1:100:28      0|0:77:27       0|0:100:71
+18     33858838        rs58576061      T       C       .       PASS    AA=T;DP=112     GT:GQ:DP        0|1:100:28      0|0:77:30       0|0:100:56
+4      20010179        .       T       G       .       PASS    AA=T;DP=116     GT:GQ:DP        0|1:100:28      0|0:80:25       0|0:100:64
+3      36831939        .       G       A       .       PASS    AA=G;DP=119     GT:GQ:DP        0|1:100:28      0|0:80:25       0|0:100:65
+11     79327410        .       A       G       .       PASS    AA=A;DP=118     GT:GQ:DP        0|1:100:28      0|0:80:25       0|0:100:70
+2      200270993       rs1584597       G       A       .       PASS    AA=A;DP=126     GT:GQ:DP        0|1:100:28      0|0:80:25       0|0:100:75
+14     63485846        rs1255865       T       G       .       PASS    AA=T;DP=138     GT:GQ:DP        0|1:100:28      0|0:80:25       0|0:100:87
+11     122030983       rs3937027       C       A       .       PASS    AA=C;DP=139     GT:GQ:DP        0|1:100:28      0|0:80:25       0|0:100:90
+12     4507490 .       G       A       .       PASS    AA=G;DP=105     GT:GQ:DP        0|1:100:28      0|0:80:26       0|0:100:51
+11     35394755        rs1923292       A       G       .       PASS    AA=A;DP=124     GT:GQ:DP        0|1:100:28      0|0:80:26       0|0:100:65
+11     48206355        rs10769331      G       A       .       PASS    AA=g;DP=135     GT:GQ:DP        0|1:100:28      0|0:80:26       0|0:100:80
+5      9699066 .       C       T       .       PASS    AA=c;DP=141     GT:GQ:DP        0|1:100:28      0|0:80:26       0|0:90:42
+12     39118326        .       C       T       .       PASS    AA=C;DP=145     GT:GQ:DP        0|1:100:28      0|0:80:27       0|0:100:37
+8      80186788        rs11777912      C       T       .       PASS    AA=C;DP=128     GT:GQ:DP        0|1:100:28      0|0:80:27       0|0:100:71
+9      131338554       rs1616208       G       A       .       PASS    AA=G;DP=137     GT:GQ:DP        0|1:100:28      0|0:80:28       0|0:100:86
+4      190505336       .       G       A       .       PASS    AA=G;DP=115     GT:GQ:DP        0|1:100:28      0|0:83:26       0|0:100:59
+12     77582710        rs12305842      G       A       .       PASS    AA=G;DP=118     GT:GQ:DP        0|1:100:28      0|0:83:26       0|0:100:63
+3      158907502       rs6772521       A       G       .       PASS    AA=A;DP=118     GT:GQ:DP        0|1:100:28      0|0:83:26       0|0:100:64
+20     36459756        rs6099485       A       G       .       PASS    AA=A;DP=124     GT:GQ:DP        0|1:100:28      0|0:83:26       0|0:100:71
+20     59145018        .       C       T       .       PASS    AA=T;DP=130     GT:GQ:DP        0|1:100:28      0|0:83:26       0|0:70:35
+9      3054399 rs12349887      G       C       .       PASS    AA=G;DP=140     GT:GQ:DP        0|1:100:28      0|0:83:26       0|0:70:39
+14     88620141        rs10438201      C       T       .       PASS    AA=T;DP=141     GT:GQ:DP        0|1:100:28      0|0:83:27       0|0:100:39
+9      1062392 rs7030298       G       C       .       PASS    AA=G;DP=111     GT:GQ:DP        0|1:100:28      0|0:83:27       0|0:100:58
+16     13204918        .       C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        0|1:100:28      0|0:83:27       0|0:100:65
+10     20969528        rs1925538       T       C       .       PASS    AA=T;DP=158     GT:GQ:DP        0|1:100:28      0|0:83:28       0|0:100:98
+5      122022046       rs35538143      C       T       .       PASS    AA=T;DP=135     GT:GQ:DP        0|1:100:28      0|0:84:33       0|0:100:74
+8      112805814       .       T       C       .       PASS    AA=T;DP=143     GT:GQ:DP        0|1:100:28      0|0:86:27       0|0:100:45
+2      8648516 rs10929542      G       A       .       PASS    AA=G;DP=106     GT:GQ:DP        0|1:100:28      0|0:86:27       0|0:100:49
+1      94912429        rs1809763       T       A       .       PASS    AA=T;DP=115;HM2 GT:GQ:DP        0|1:100:28      0|0:86:27       0|0:100:58
+10     53510781        .       C       G       .       PASS    AA=C;DP=127     GT:GQ:DP        0|1:100:28      0|0:86:27       0|0:100:72
+14     77265486        rs10162548      T       C       .       PASS    AA=C;DP=130     GT:GQ:DP        0|1:100:28      0|0:86:27       0|0:100:75
+10     11018283        rs12244460      A       G       .       PASS    AA=A;DP=134     GT:GQ:DP        0|1:100:28      0|0:86:27       0|0:100:77
+5      95402595        .       T       C       .       PASS    AA=C;DP=133     GT:GQ:DP        0|1:100:28      0|0:86:27       0|0:100:81
+16     66984403        .       A       G       .       PASS    AA=a;DP=140     GT:GQ:DP        0|1:100:28      0|0:86:27       0|0:100:86
+12     101791327       rs10778205      G       C       .       PASS    AA=C;DP=142     GT:GQ:DP        0|1:100:28      0|0:86:27       0|0:100:89
+8      40446861        rs58320441      G       T       .       PASS    AA=G;DP=145     GT:GQ:DP        0|1:100:28      0|0:86:28       0|0:100:48
+5      43918401        rs13359520      T       C       .       PASS    AA=T;DP=127     GT:GQ:DP        0|1:100:28      0|0:86:28       0|0:100:72
+4      176257119       rs6820576       C       G       .       PASS    AA=C;DP=129     GT:GQ:DP        0|1:100:28      0|0:86:28       0|0:100:75
+8      64655671        rs7826641       T       C       .       PASS    AA=C;DP=132     GT:GQ:DP        0|1:100:28      0|0:86:28       0|0:100:75
+3      72170085        .       T       C       .       PASS    AA=T;DP=131     GT:GQ:DP        0|1:100:28      0|0:86:28       0|0:100:76
+10     36378234        .       C       T       .       PASS    AA=T;DP=150     GT:GQ:DP        0|1:100:28      0|0:89:28       0|0:100:53
+12     86898411        rs58896147      A       G       .       PASS    AA=A;DP=112     GT:GQ:DP        0|1:100:28      0|0:89:28       0|0:100:56
+10     28659800        rs703016        T       C       .       PASS    AA=T;DP=127     GT:GQ:DP        0|1:100:28      0|0:89:29       0|0:100:70
+16     71725437        rs4620989       G       A       .       PASS    AA=A;DP=138     GT:GQ:DP        0|1:100:28      0|0:89:29       0|0:100:83
+6      16833447        rs3812220       G       C       .       PASS    AA=G;DP=140     GT:GQ:DP        0|1:100:28      0|0:89:31       0|0:100:83
+3      187632635       rs7616678       T       C       .       PASS    AA=T;DP=172     GT:GQ:DP        0|1:100:28      0|0:92:29       0|0:100:70
+4      25126733        rs6846719       A       C       .       PASS    AA=A;DP=123     GT:GQ:DP        0|1:100:28      0|0:92:29       0|0:100:70
+3      100619200       rs2623346       A       G       .       PASS    AA=G;DP=127     GT:GQ:DP        0|1:100:28      0|0:92:30       0|0:100:71
+2      152515526       .       C       T       .       PASS    AA=C;DP=127     GT:GQ:DP        0|1:100:28      0|0:92:30       0|0:100:72
+17     10966448        .       T       C       .       PASS    AA=T;DP=131     GT:GQ:DP        0|1:100:28      0|0:92:30       0|0:100:73
+5      73981769        .       G       A       .       PASS    AA=G;DP=132     GT:GQ:DP        0|1:100:28      0|0:92:30       0|0:100:75
+13     37875703        .       T       G       .       PASS    AA=T;DP=136     GT:GQ:DP        0|1:100:28      0|0:92:31       0|0:100:77
+2      158506733       .       T       G       .       PASS    AA=T;DP=145     GT:GQ:DP        0|1:100:28      0|0:92:31       0|0:100:85
+21     16331894        .       T       G       .       PASS    AA=T;DP=133     GT:GQ:DP        0|1:100:28      0|0:95:30       0|0:100:78
+21     32506011        .       A       G       .       PASS    AA=A;DP=137     GT:GQ:DP        0|1:100:28      0|0:95:30       0|0:100:78
+5      170896103       rs2879417       A       G       .       PASS    AA=G;DP=137     GT:GQ:DP        0|1:100:28      0|0:95:30       0|0:100:80
+7      11336334        rs10225690      C       T       .       PASS    AA=C;DP=123     GT:GQ:DP        0|1:100:28      0|0:95:31       0|0:100:64
+8      108448121       rs1654701       G       A       .       PASS    AA=G;DP=125     GT:GQ:DP        0|1:100:28      0|0:95:32       0|0:100:65
+11     92714513        .       A       G       .       PASS    AA=G;DP=149     GT:GQ:DP        0|1:100:28      0|0:95:39       0|0:100:76
+6      5096016 rs60478717      A       G       .       PASS    AA=A;DP=159     GT:GQ:DP        0|1:100:28      0|0:98:31       0|0:100:53
+3      26216314        .       T       A       .       PASS    AA=T;DP=131     GT:GQ:DP        0|1:100:28      0|0:98:31       0|0:100:72
+5      74225119        .       C       T       .       PASS    AA=C;DP=118     GT:GQ:DP        0|1:100:28      0|0:98:32       0|0:100:57
+8      72760639        rs1345978       A       T       .       PASS    AA=T;DP=135     GT:GQ:DP        0|1:100:28      0|0:98:32       0|0:100:75
+2      84956711        .       C       T       .       PASS    AA=C;DP=159     GT:GQ:DP        0|1:100:28      0|0:98:34       0|0:100:55
+9      76547588        .       G       C       .       PASS    AA=G;DP=114     GT:GQ:DP        0|1:100:28      0|1:100:13      0|0:100:75
+3      150974236       rs12486289      C       T       .       PASS    AA=C;DP=116     GT:GQ:DP        0|1:100:28      0|1:100:14      0|0:100:73
+2      41485687        rs1396137       C       T       .       PASS    AA=T;DP=110     GT:GQ:DP        0|1:100:28      0|1:100:15      0|0:100:68
+7      49183816        rs5028489       A       C       .       PASS    AA=A;DP=109     GT:GQ:DP        0|1:100:28      0|1:100:18      0|0:100:65
+1      33205104        rs56014205      G       C       .       PASS    AA=G;DP=119     GT:GQ:DP        0|1:100:28      0|1:100:18      0|0:100:75
+2      214537700       rs1877051       T       C       .       PASS    AA=C;DP=126     GT:GQ:DP        0|1:100:28      0|1:100:19      0|0:100:36
+11     46919772        rs2035067       A       C       .       PASS    AA=A;DP=106     GT:GQ:DP        0|1:100:28      0|1:100:19      0|0:100:58
+3      193776447       rs781415        C       T       .       PASS    AA=T;DP=113     GT:GQ:DP        0|1:100:28      0|1:100:20      0|0:100:65
+3      113662774       rs2633540       A       T       .       PASS    AA=A;DP=114     GT:GQ:DP        0|1:100:28      0|1:100:20      0|0:100:68
+1      75444275        rs11162764      T       C       .       PASS    AA=C;DP=93      GT:GQ:DP        0|1:100:28      0|1:100:21      0|0:100:43
+13     78153540        rs7324794       G       A       .       PASS    AA=g;DP=133     GT:GQ:DP        0|1:100:28      0|1:100:21      0|0:100:82
+1      22088866        rs3767141       C       T       .       PASS    AA=T;DP=146;HM2;HM3     GT:GQ:DP        0|1:100:28      0|1:100:22      0|0:100:96
+10     106651582       rs868009        G       A       .       PASS    AA=G;DP=131     GT:GQ:DP        0|1:100:28      0|1:100:23      0|0:100:70
+5      30874244        rs1343680       G       A       .       PASS    AA=G;DP=128     GT:GQ:DP        0|1:100:28      0|1:100:24      0|0:100:67
+5      106117628       rs58666229      C       T       .       PASS    AA=C;DP=121     GT:GQ:DP        0|1:100:28      0|1:100:24      0|0:100:71
+5      13350813        rs10055552      G       T       .       PASS    AA=T;DP=133     GT:GQ:DP        0|1:100:28      0|1:100:24      0|0:100:87
+8      138826452       rs7833631       A       G       .       PASS    AA=A;DP=97      GT:GQ:DP        0|1:100:28      0|1:100:25      0|0:100:45
+3      26871558        .       C       A       .       PASS    AA=C;DP=109     GT:GQ:DP        0|1:100:28      0|1:100:25      0|0:100:56
+6      118593806       .       T       C       .       PASS    AA=T;DP=137     GT:GQ:DP        0|1:100:28      0|1:100:25      0|0:100:85
+11     61938458        rs2958542       C       T       .       PASS    AA=C;DP=148     GT:GQ:DP        0|1:100:28      0|1:100:25      0|0:100:96
+1      235867004       rs578152        C       A       .       PASS    AA=A;DP=122;HM2 GT:GQ:DP        0|1:100:28      0|1:100:26      0|0:100:69
+4      178131158       .       T       A       .       PASS    AA=A;DP=138     GT:GQ:DP        0|1:100:28      0|1:100:26      0|0:100:75
+12     114433711       rs7980016       C       T       .       PASS    AA=T;DP=133     GT:GQ:DP        0|1:100:28      0|1:100:26      0|0:100:83
+10     100132144       rs17109597      G       A       .       PASS    AA=G;DP=116     GT:GQ:DP        0|1:100:28      0|1:100:27      0|0:100:54
+4      41815095        rs16854030      G       A       .       PASS    AA=A;DP=136     GT:GQ:DP        0|1:100:28      0|1:100:27      0|0:100:78
+8      18734317        rs13256850      A       C       .       PASS    AA=A;DP=147     GT:GQ:DP        0|1:100:28      0|1:100:28      0|0:100:44
+21     34901177        rs8134779       T       C       .       PASS    AA=C;DP=125     GT:GQ:DP        0|1:100:28      0|1:100:28      0|0:100:69
+18     50034728        rs9966557       C       T       .       PASS    AA=C;DP=138     GT:GQ:DP        0|1:100:28      0|1:100:30      0|0:100:80
+15     57760756        rs6151496       C       T       .       PASS    AA=T;DP=157     GT:GQ:DP        0|1:100:28      0|1:100:31      0|0:100:101
+14     33516466        rs1680666       C       T       .       PASS    AA=T;DP=120     GT:GQ:DP        0|1:100:28      0|1:100:35      0|0:100:60
+6      16983643        rs1573135       C       T       .       PASS    AA=T;DP=141     GT:GQ:DP        0|1:100:28      0|1:100:38      0|0:100:74
+10     16547458        rs7093174       A       T       .       PASS    AA=A;DP=147     GT:GQ:DP        0|1:100:28      0|1:100:38      0|0:100:80
+11     124663259       rs1365196       A       G       .       PASS    AA=G;DP=110     GT:GQ:DP        0|1:100:28      0|1:26:14       0|0:100:66
+21     18386629        .       T       C       .       PASS    AA=C;DP=121     GT:GQ:DP        0|1:100:28      0|1:27:17       0|0:96:39
+11     22320628        .       C       T       .       PASS    AA=C;DP=112     GT:GQ:DP        0|1:100:28      0|1:36:14       0|0:100:68
+17     74880561        rs7220985       C       G       .       PASS    AA=A;DP=152     GT:GQ:DP        0|1:100:28      0|1:38:15       0|0:100:45
+15     74530400        rs284905        C       T       .       PASS    AA=C;DP=126     GT:GQ:DP        0|1:100:28      0|1:38:24       0|0:100:71
+12     70496214        .       G       A       .       PASS    AA=g;DP=89      GT:GQ:DP        0|1:100:28      0|1:45:12       0|0:100:51
+7      139373512       .       T       C       .       PASS    AA=C;DP=109     GT:GQ:DP        0|1:100:28      0|1:48:15       0|0:100:61
+2      1552767 rs13406200      C       G       .       PASS    AA=C;DP=120     GT:GQ:DP        0|1:100:28      0|1:49:17       0|0:100:75
+1      59898951        .       A       G       .       PASS    AA=A;DP=106     GT:GQ:DP        0|1:100:28      0|1:49:25       0|0:100:54
+1      194382537       rs10754176      C       T       .       PASS    AA=C;DP=99;HM3  GT:GQ:DP        0|1:100:28      0|1:53:15       0|0:100:58
+1      226567551       rs509920        G       T       .       PASS    AA=G;DP=116     GT:GQ:DP        0|1:100:28      0|1:54:17       0|0:100:72
+9      26886272        rs4977722       G       C       .       PASS    AA=G;DP=139     GT:GQ:DP        0|1:100:28      0|1:55:24       0|0:100:88
+7      55680466        rs11763602      T       A       .       PASS    AA=.;DP=116     GT:GQ:DP        0|1:100:28      0|1:63:22       0|0:100:67
+18     2463624 rs10164264      C       T       .       PASS    AA=C;DP=126     GT:GQ:DP        0|1:100:28      0|1:66:20       0|0:100:79
+4      173069267       rs6845054       C       T       .       PASS    AA=C;DP=111     GT:GQ:DP        0|1:100:28      0|1:67:16       0|0:100:67
+15     95604538        rs4246289       C       T       .       PASS    AA=C;DP=126     GT:GQ:DP        0|1:100:28      0|1:75:19       0|0:100:75
+4      172820837       .       A       G       .       PASS    AA=A;DP=154     GT:GQ:DP        0|1:100:28      0|1:79:22       0|0:100:49
+9      133318249       rs7028069       T       C       .       PASS    AA=T;DP=126     GT:GQ:DP        0|1:100:28      0|1:79:23       0|0:100:77
+6      32903997        rs241455        C       A       .       PASS    AA=A;DP=120     GT:GQ:DP        0|1:100:28      0|1:83:25       0|0:100:67
+10     106690919       rs7094379       C       A       .       PASS    AA=C;DP=138     GT:GQ:DP        0|1:100:28      0|1:90:27       0|0:100:82
+4      68153647        rs354884        T       C       .       PASS    AA=T;DP=97      GT:GQ:DP        0|1:100:28      0|1:93:17       0|0:100:51
+5      84245607        .       G       A       .       PASS    AA=G;DP=118     GT:GQ:DP        0|1:100:28      0|1:94:21       0|0:100:65
+13     97836770        rs651466        T       C       .       PASS    AA=T;DP=100     GT:GQ:DP        0|1:100:28      0|1:94:24       0|0:100:48
+4      179026554       rs10010004      C       T       .       PASS    AA=C;DP=87      GT:GQ:DP        0|1:100:28      0|1:96:19       0|0:100:41
+1      67030739        rs12759505      T       A       .       PASS    AA=N;DP=99      GT:GQ:DP        0|1:100:28      1|1:14:19       0|1:100:54
+3      15441044        rs60513796      A       T       .       PASS    AA=T;DP=127     GT:GQ:DP        0|1:100:28      1|1:17:22       0|1:100:79
+2      171783963       rs2193452       A       G       .       PASS    AA=A;DP=112     GT:GQ:DP        0|1:100:28      1|1:19:18       0|1:100:67
+14     21513612        .       A       G       .       PASS    AA=A;DP=101     GT:GQ:DP        0|1:100:28      1|1:22:13       0|1:100:60
+7      42432789        rs10274882      T       C       .       PASS    AA=C;DP=101     GT:GQ:DP        0|1:100:28      1|1:26:19       0|1:100:56
+10     134048230       .       G       A       .       PASS    AA=G;DP=87      GT:GQ:DP        0|1:100:28      1|1:27:10       0|1:100:41
+5      10934485        rs1548705       C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        0|1:100:28      1|1:30:11       0|1:100:73
+6      63385207        rs1113362       C       T       .       PASS    AA=T;DP=107     GT:GQ:DP        0|1:100:28      1|1:30:22       0|1:100:45
+19     61760892        rs11670421      G       T       .       PASS    AA=G;DP=123     GT:GQ:DP        0|1:100:28      1|1:30:26       0|1:100:72
+22     36920761        rs6001046       G       A       .       PASS    AA=G;DP=119     GT:GQ:DP        0|1:100:28      1|1:36:14       0|1:100:76
+14     88730740        rs8009301       G       A       .       PASS    AA=A;DP=90      GT:GQ:DP        0|1:100:28      1|1:39:14       0|1:100:48
+5      108409826       rs2043287       C       T       .       PASS    AA=T;DP=101     GT:GQ:DP        0|1:100:28      1|1:39:14       0|1:100:59
+14     22085701        rs943887        A       G       .       PASS    AA=G;DP=121     GT:GQ:DP        0|1:100:28      1|1:39:14       0|1:100:79
+10     78343317        rs2099330       G       A       .       PASS    AA=g;DP=117     GT:GQ:DP        0|1:100:28      1|1:39:15       0|1:100:71
+7      151273503       rs11981199      C       T       .       PASS    AA=C;DP=91      GT:GQ:DP        0|1:100:28      1|1:40:23       0|1:100:42
+2      22401138        rs4665502       C       G       .       PASS    AA=C;DP=109     GT:GQ:DP        0|1:100:28      1|1:41:22       0|1:100:60
+10     123757441       rs10047287      G       A       .       PASS    AA=G;DP=121     GT:GQ:DP        0|1:100:28      1|1:42:15       0|1:100:75
+19     10510949        rs8106261       C       A       .       PASS    AA=C;DP=116     GT:GQ:DP        0|1:100:28      1|1:42:15       0|1:100:75
+3      151706458       rs6414376       C       A       .       PASS    AA=A;DP=118     GT:GQ:DP        0|1:100:28      1|1:42:15       0|1:100:77
+1      80273072        rs6684809       A       G       .       PASS    AA=A;DP=91;HM2  GT:GQ:DP        0|1:100:28      1|1:42:16       0|1:100:48
+3      5671116 rs34018857      C       T       .       PASS    AA=T;DP=144     GT:GQ:DP        0|1:100:28      1|1:44:27       0|1:100:78
+10     5771713 rs9423930       T       G       .       PASS    AA=T;DP=89      GT:GQ:DP        0|1:100:28      1|1:45:16       0|1:100:43
+7      7240084 rs1008898       G       T       .       PASS    AA=T;DP=124     GT:GQ:DP        0|1:100:28      1|1:45:16       0|1:100:80
+7      29328831        rs39124 C       T       .       PASS    AA=T;DP=119     GT:GQ:DP        0|1:100:28      1|1:47:23       0|1:100:71
+14     83686170        rs7160548       C       G       .       PASS    AA=G;DP=79      GT:GQ:DP        0|1:100:28      1|1:48:17       0|1:100:26
+10     127512978       rs2185740       A       T       .       PASS    AA=T;DP=92      GT:GQ:DP        0|1:100:28      1|1:48:19       0|1:100:44
+16     12580092        rs9936373       T       C       .       PASS    AA=T;DP=99      GT:GQ:DP        0|1:100:28      1|1:49:20       0|1:100:41
+14     98325295        rs8012408       G       A       .       PASS    AA=G;DP=124     GT:GQ:DP        0|1:100:28      1|1:51:20       0|1:100:75
+1      116241069       rs815112        G       A       .       PASS    AA=A;DP=126     GT:GQ:DP        0|1:100:28      1|1:51:26       0|1:100:75
+6      162392361       rs28715907      C       T       .       PASS    AA=T;DP=123     GT:GQ:DP        0|1:100:28      1|1:52:21       0|1:100:74
+12     122500153       rs11516174      C       T       .       PASS    AA=T;DP=129     GT:GQ:DP        0|1:100:28      1|1:53:22       0|1:100:80
+9      18207869        rs10810929      C       T       .       PASS    AA=C;DP=97      GT:GQ:DP        0|1:100:28      1|1:54:19       0|1:100:50
+12     2491453 rs10848668      T       C       .       PASS    AA=C;DP=101     GT:GQ:DP        0|1:100:28      1|1:54:19       0|1:100:55
+13     35223444        rs9574499       A       C       .       PASS    AA=C;DP=110     GT:GQ:DP        0|1:100:28      1|1:54:19       0|1:100:65
+2      123156997       rs10496593      G       T       .       PASS    AA=G;DP=111     GT:GQ:DP        0|1:100:28      1|1:54:19       0|1:100:68
+7      125331099       rs1419584       A       G       .       PASS    AA=G;DP=119     GT:GQ:DP        0|1:100:28      1|1:54:19       0|1:100:71
+14     61935447        rs6573436       G       T       .       PASS    AA=T;DP=125     GT:GQ:DP        0|1:100:28      1|1:54:19       0|1:100:77
+17     29076768        rs1490922       T       C       .       PASS    AA=T;DP=127     GT:GQ:DP        0|1:100:28      1|1:54:20       0|1:100:79
+20     9835989 rs1041535       A       C       .       PASS    AA=A;DP=124     GT:GQ:DP        0|1:100:28      1|1:55:21       0|1:100:45
+11     3029018 rs6578318       T       C       .       PASS    AA=C;DP=157     GT:GQ:DP        0|1:100:28      1|1:57:20       0|1:100:60
+2      186581654       rs1994418       A       C       .       PASS    AA=A;DP=113     GT:GQ:DP        0|1:100:28      1|1:57:20       0|1:100:64
+13     37398320        rs4941880       T       C       .       PASS    AA=T;DP=111     GT:GQ:DP        0|1:100:28      1|1:57:21       0|1:100:63
+1      157680084       rs4261112       C       T       .       PASS    AA=C;DP=122     GT:GQ:DP        0|1:100:28      1|1:57:21       0|1:100:74
+1      100803649       rs10783138      C       T       .       PASS    AA=C;DP=128     GT:GQ:DP        0|1:100:28      1|1:57:21       0|1:100:77
+16     82616843        rs11862961      T       C       .       PASS    AA=C;DP=131     GT:GQ:DP        0|1:100:28      1|1:57:21       0|1:100:80
+1      232891980       rs635288        T       C       .       PASS    AA=T;DP=123     GT:GQ:DP        0|1:100:28      1|1:57:24       0|1:100:68
+3      89061715        rs9849840       A       C       .       PASS    AA=C;DP=93      GT:GQ:DP        0|1:100:28      1|1:5:20        0|1:100:46
+21     32470693        rs9978000       A       C       .       PASS    AA=A;DP=98      GT:GQ:DP        0|1:100:28      1|1:60:21       0|1:100:48
+18     66746511        rs987621        C       A       .       PASS    AA=A;DP=96      GT:GQ:DP        0|1:100:28      1|1:60:21       0|1:100:49
+4      136243890       rs6847147       T       G       .       PASS    AA=G;DP=117     GT:GQ:DP        0|1:100:28      1|1:60:21       0|1:100:69
+5      138424415       rs10039449      A       G       .       PASS    AA=G;DP=113     GT:GQ:DP        0|1:100:28      1|1:60:21       0|1:100:69
+1      73507854        rs7340057       G       A       .       PASS    AA=G;DP=112     GT:GQ:DP        0|1:100:28      1|1:60:22       0|1:100:62
+2      82567590        rs6757639       C       G       .       PASS    AA=G;DP=104     GT:GQ:DP        0|1:100:28      1|1:60:23       0|1:100:54
+2      163273563       rs11887380      A       G       .       PASS    AA=G;DP=133     GT:GQ:DP        0|1:100:28      1|1:61:22       0|1:100:42
+8      125163546       rs6987090       T       C       .       PASS    AA=T;DP=100     GT:GQ:DP        0|1:100:28      1|1:63:22       0|1:100:52
+18     59623435        rs1055901       T       C       .       PASS    AA=t;DP=103     GT:GQ:DP        0|1:100:28      1|1:63:22       0|1:100:54
+13     36700184        rs6563520       G       T       .       PASS    AA=G;DP=108     GT:GQ:DP        0|1:100:28      1|1:63:22       0|1:100:59
+6      94781674        rs7758149       A       G       .       PASS    AA=G;DP=126     GT:GQ:DP        0|1:100:28      1|1:63:22       0|1:100:60
+10     424636  rs7914284       C       T       .       PASS    AA=C;DP=116     GT:GQ:DP        0|1:100:28      1|1:63:22       0|1:100:66
+5      54237796        rs4865884       G       A       .       PASS    AA=A;DP=127     GT:GQ:DP        0|1:100:28      1|1:63:23       0|1:100:76
+2      33259761        rs4670833       G       A       .       PASS    AA=G;DP=129     GT:GQ:DP        0|1:100:28      1|1:66:24       0|1:100:77
+6      17280065        rs2328066       A       G       .       PASS    AA=G;DP=117     GT:GQ:DP        0|1:100:28      1|1:66:25       0|1:100:69
+6      109300686       rs2806366       C       T       .       PASS    AA=C;DP=128     GT:GQ:DP        0|1:100:28      1|1:69:24       0|1:100:75
+7      114465197       rs10247481      A       G       .       PASS    AA=G;DP=123     GT:GQ:DP        0|1:100:28      1|1:69:25       0|1:100:73
+3      63160047        rs2367759       A       G       .       PASS    AA=A;DP=121     GT:GQ:DP        0|1:100:28      1|1:72:25       0|1:100:62
+3      31516873        rs7641067       C       T       .       PASS    AA=T;DP=140     GT:GQ:DP        0|1:100:28      1|1:72:25       0|1:100:90
+7      41847923        rs28699601      G       T       .       PASS    AA=G;DP=107     GT:GQ:DP        0|1:100:28      1|1:72:26       0|1:100:54
+4      103554517       rs13114804      A       C       .       PASS    AA=C;DP=142     GT:GQ:DP        0|1:100:28      1|1:75:26       0|1:100:88
+1      77956449        rs11162378      G       A       .       PASS    AA=A;DP=117;HM2;HM3     GT:GQ:DP        0|1:100:28      1|1:78:27       0|1:100:64
+8      119296017       rs2514961       T       G       .       PASS    AA=T;DP=150     GT:GQ:DP        0|1:100:28      1|1:78:27       0|1:100:78
+13     74474271        rs1361506       C       T       .       PASS    AA=T;DP=128     GT:GQ:DP        0|1:100:28      1|1:78:28       0|1:100:72
+5      80731997        rs16878614      T       G       .       PASS    AA=T;DP=137     GT:GQ:DP        0|1:100:28      1|1:81:28       0|1:100:81
+16     71977515        rs17370183      T       C       .       PASS    AA=T;DP=142     GT:GQ:DP        0|1:100:28      1|1:81:29       0|1:100:88
+15     35607800        rs1840900       C       T       .       PASS    AA=T;DP=118     GT:GQ:DP        0|1:100:28      1|1:84:29       0|1:100:63
+3      151544718       rs9845738       G       A       .       PASS    AA=G;DP=134     GT:GQ:DP        0|1:100:28      1|1:84:30       0|1:100:78
+16     74606077        rs1603697       T       G       .       PASS    AA=T;DP=127     GT:GQ:DP        0|1:100:28      1|1:84:34       0|1:100:67
+18     3675098 rs367940        A       G       .       PASS    AA=G;DP=111     GT:GQ:DP        0|1:100:28      1|1:87:31       0|1:100:53
+3      2026778 rs7631645       T       C       .       PASS    AA=C;DP=115     GT:GQ:DP        0|1:100:28      1|1:87:31       0|1:100:56
+1      102319463       rs6671653       G       C       .       PASS    AA=C;DP=127;HM2 GT:GQ:DP        0|1:100:28      1|1:96:33       0|1:100:68
+5      1740858 rs10051955      T       G       .       PASS    AA=g;DP=89      GT:GQ:DP        0|1:100:28      1|1:9:15        0|1:100:47
+9      103152468       .       G       A       .       PASS    AA=A;DP=118     GT:GQ:DP        0|1:100:29      0|0:100:32      0|0:100:60
+15     56160446        rs28584844      T       G       .       PASS    AA=T;DP=130     GT:GQ:DP        0|1:100:29      0|0:100:32      0|0:100:66
+1      114561878       rs209890        G       A       .       PASS    AA=G;DP=161;HM2 GT:GQ:DP        0|1:100:29      0|0:100:33      0|0:100:55
+14     73397895        rs60110439      C       T       .       PASS    AA=C;DP=152     GT:GQ:DP        0|1:100:29      0|0:100:33      0|0:100:91
+8      54632451        .       C       T       .       PASS    AA=C;DP=131     GT:GQ:DP        0|1:100:29      0|0:100:37      0|0:100:67
+8      15284707        rs7820683       G       C       .       PASS    AA=g;DP=135     GT:GQ:DP        0|1:100:29      0|0:100:37      0|0:100:71
+20     30406481        rs1412998       G       T       .       PASS    AA=G;DP=162     GT:GQ:DP        0|1:100:29      0|0:100:38      0|0:100:51
+5      129176471       rs6885731       C       T       .       PASS    AA=C;DP=130     GT:GQ:DP        0|1:100:29      0|0:100:39      0|0:100:59
+10     122382942       .       G       A       .       PASS    AA=G;DP=129     GT:GQ:DP        0|1:100:29      0|0:100:42      0|0:100:60
+11     81883619        rs11827538      T       C       .       PASS    AA=T;DP=158     GT:GQ:DP        0|1:100:29      0|0:100:42      0|0:100:88
+11     85752277        .       T       A       .       PASS    AA=T;DP=104     GT:GQ:DP        0|1:100:29      0|0:16:14       0|0:100:63
+5      126193826       .       C       T       .       PASS    AA=C;DP=98      GT:GQ:DP        0|1:100:29      0|0:21:16       0|0:100:51
+10     49542730        rs11101417      C       A       .       PASS    AA=C;DP=136     GT:GQ:DP        0|1:100:29      0|0:27:18       0|0:100:48
+11     78500787        rs10899590      A       G       .       PASS    AA=G;DP=101     GT:GQ:DP        0|1:100:29      0|0:27:18       0|0:100:54
+3      143974400       .       A       G       .       PASS    AA=A;DP=123     GT:GQ:DP        0|1:100:29      0|0:27:22       0|0:100:75
+8      51540957        .       G       T       .       PASS    AA=G;DP=118     GT:GQ:DP        0|1:100:29      0|0:28:22       0|0:100:67
+5      162734284       .       A       G       .       PASS    AA=A;DP=96      GT:GQ:DP        0|1:100:29      0|0:29:18       0|0:100:47
+7      3199462 .       C       G       .       PASS    AA=c;DP=112     GT:GQ:DP        0|1:100:29      0|0:29:19       0|0:100:63
+22     35826793        rs9619658       C       T       .       PASS    AA=T;DP=123     GT:GQ:DP        0|1:100:29      0|0:29:19       0|0:100:76
+11     2347405 rs7943689       C       G       .       PASS    AA=C;DP=122     GT:GQ:DP        0|1:100:29      0|0:29:19       0|0:100:77
+4      158368193       rs4131622       A       C       .       PASS    AA=A;DP=113     GT:GQ:DP        0|1:100:29      0|0:29:8        0|0:99:34
+19     21897309        rs7254293       A       C       .       PASS    AA=A;DP=127     GT:GQ:DP        0|1:100:29      0|0:31:21       0|0:100:79
+20     61607768        rs57222124      C       T       .       PASS    AA=C;DP=105     GT:GQ:DP        0|1:100:29      0|0:32:10       0|0:100:66
+9      24538537        .       C       A       .       PASS    AA=C;DP=98      GT:GQ:DP        0|1:100:29      0|0:32:20       0|0:100:49
+9      38091434        rs7857553       A       G       .       PASS    AA=A;DP=124     GT:GQ:DP        0|1:100:29      0|0:32:20       0|0:100:77
+7      154294807       .       C       G       .       PASS    AA=C;DP=115     GT:GQ:DP        0|1:100:29      0|0:35:11       0|0:100:74
+1      110164381       rs7522243       A       G       .       PASS    AA=G;DP=119     GT:GQ:DP        0|1:100:29      0|0:35:16       0|0:100:72
+4      139255767       rs934938        G       A       .       PASS    AA=G;DP=136     GT:GQ:DP        0|1:100:29      0|0:35:21       0|0:100:45
+3      125824503       .       T       G       .       PASS    AA=T;DP=118     GT:GQ:DP        0|1:100:29      0|0:35:21       0|0:100:69
+2      52750512        rs13401972      T       C       .       PASS    AA=C;DP=114     GT:GQ:DP        0|1:100:29      0|0:37:16       0|0:100:74
+17     16475576        rs9889227       T       C       .       PASS    AA=T;DP=112     GT:GQ:DP        0|1:100:29      0|0:37:21       0|0:100:60
+13     60465691        rs1827629       A       G       .       PASS    AA=A;DP=91      GT:GQ:DP        0|1:100:29      0|0:38:11       0|0:100:40
+22     42502221        rs743941        T       A       .       PASS    AA=T;DP=128     GT:GQ:DP        0|1:100:29      0|0:38:11       0|0:100:91
+10     71342960        .       A       G       .       PASS    AA=G;DP=142     GT:GQ:DP        0|1:100:29      0|0:38:26       0|0:100:87
+2      160325119       rs11681565      C       G       .       PASS    AA=C;DP=125     GT:GQ:DP        0|1:100:29      0|0:40:16       0|0:100:80
+7      158601182       .       G       A       .       PASS    AA=G;DP=100     GT:GQ:DP        0|1:100:29      0|0:41:12       0|0:100:59
+15     80154960        rs2665098       T       C       .       PASS    AA=C;DP=111     GT:GQ:DP        0|1:100:29      0|0:41:12       0|0:100:71
+7      51342955        rs17756186      C       T       .       PASS    AA=C;DP=126     GT:GQ:DP        0|1:100:29      0|0:41:15       0|0:100:73
+12     10157766        .       C       A       .       PASS    AA=c;DP=94      GT:GQ:DP        0|1:100:29      0|0:41:23       0|0:100:42
+5      13963241        .       T       G       .       PASS    AA=T;DP=124     GT:GQ:DP        0|1:100:29      0|0:41:23       0|0:100:54
+7      138328893       rs17607706      G       A       .       PASS    AA=G;DP=131     GT:GQ:DP        0|1:100:29      0|0:41:23       0|0:100:83
+16     23156756        rs62031939      C       T       .       PASS    AA=T;DP=123     GT:GQ:DP        0|1:100:29      0|0:42:21       0|0:100:34
+11     131001438       .       G       A       .       PASS    AA=g;DP=100     GT:GQ:DP        0|1:100:29      0|0:42:21       0|0:100:35
+16     66632117        rs7196088       G       A       .       PASS    AA=G;DP=133     GT:GQ:DP        0|1:100:29      0|0:43:19       0|0:100:86
+3      76911746        .       T       C       .       PASS    AA=T;DP=100     GT:GQ:DP        0|1:100:29      0|0:44:13       0|0:100:58
+19     40796100        rs12980989      A       C       .       PASS    AA=A;DP=106     GT:GQ:DP        0|1:100:29      0|0:44:13       0|0:100:65
+16     14361765        .       T       A       .       PASS    AA=T;DP=115     GT:GQ:DP        0|1:100:29      0|0:44:13       0|0:100:75
+7      36889755        rs6945010       T       C       .       PASS    AA=T;DP=108     GT:GQ:DP        0|1:100:29      0|0:44:14       0|0:100:66
+1      76100453        .       A       T       .       PASS    AA=A;DP=120     GT:GQ:DP        0|1:100:29      0|0:44:14       0|0:100:76
+1      16681977        .       T       C       .       PASS    AA=T;DP=111     GT:GQ:DP        0|1:100:29      0|0:44:15       0|0:100:70
+2      4177642 rs17018635      A       G       .       PASS    AA=A;DP=117     GT:GQ:DP        0|1:100:29      0|0:44:15       0|0:99:34
+2      232086062       rs4973429       G       T       .       PASS    AA=T;DP=113     GT:GQ:DP        0|1:100:29      0|0:44:19       0|0:100:63
+1      101101981       rs7533037       T       G       .       PASS    AA=G;DP=129;HM2 GT:GQ:DP        0|1:100:29      0|0:46:25       0|0:100:75
+4      73941714        rs6446894       T       G       .       PASS    AA=T;DP=103     GT:GQ:DP        0|1:100:29      0|0:47:14       0|0:100:60
+5      33803403        rs10472893      T       A       .       PASS    AA=A;DP=103     GT:GQ:DP        0|1:100:29      0|0:47:14       0|0:100:60
+1      29853692        .       A       G       .       PASS    AA=A;DP=105     GT:GQ:DP        0|1:100:29      0|0:47:14       0|0:100:61
+10     130630966       rs12780495      C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        0|1:100:29      0|0:47:14       0|0:100:72
+5      38969481        .       C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        0|1:100:29      0|0:47:15       0|0:100:62
+12     44158511        rs11183063      T       C       .       PASS    AA=t;DP=115     GT:GQ:DP        0|1:100:29      0|0:47:15       0|0:100:70
+20     12344212        rs11697033      T       C       .       PASS    AA=T;DP=125     GT:GQ:DP        0|1:100:29      0|0:49:23       0|0:100:75
+7      99304523        rs10235630      G       A       .       PASS    AA=G;DP=127     GT:GQ:DP        0|1:100:29      0|0:49:26       0|0:100:70
+19     18576203        rs7249956       C       A       .       PASS    AA=C;DP=106     GT:GQ:DP        0|1:100:29      0|0:50:15       0|0:100:62
+2      119847082       rs6741823       A       G       .       PASS    AA=G;DP=122     GT:GQ:DP        0|1:100:29      0|0:50:15       0|0:100:73
+22     23641481        rs8137759       G       A       .       PASS    AA=G;DP=127     GT:GQ:DP        0|1:100:29      0|0:50:15       0|0:100:83
+4      3173376 rs363089        A       G       .       PASS    AA=A;DP=141     GT:GQ:DP        0|1:100:29      0|0:50:15       0|0:100:99
+20     40023504        rs56265456      A       G       .       PASS    AA=a;DP=110     GT:GQ:DP        0|1:100:29      0|0:50:16       0|0:100:68
+17     67914424        .       C       T       .       PASS    AA=C;DP=126     GT:GQ:DP        0|1:100:29      0|0:50:17       0|0:100:81
+20     36416281        rs2232587       T       C       .       PASS    AA=T;DP=99      GT:GQ:DP        0|1:100:29      0|0:50:17       0|0:99:33
+15     90652790        .       G       A       .       PASS    AA=g;DP=92      GT:GQ:DP        0|1:100:29      0|0:51:21       0|0:76:33
+6      124146595       rs58273003      T       C       .       PASS    AA=C;DP=126     GT:GQ:DP        0|1:100:29      0|0:52:24       0|0:100:75
+8      58458690        .       G       T       .       PASS    AA=G;DP=119     GT:GQ:DP        0|1:100:29      0|0:52:26       0|0:100:64
+2      9705373 .       G       A       .       PASS    AA=G;DP=161     GT:GQ:DP        0|1:100:29      0|0:52:27       0|0:100:52
+20     9197230 .       G       A       .       PASS    AA=A;DP=132     GT:GQ:DP        0|1:100:29      0|0:53:16       0|0:100:43
+12     100601387       .       A       T       .       PASS    AA=A;DP=95      GT:GQ:DP        0|1:100:29      0|0:53:16       0|0:100:49
+12     116459417       rs4767559       C       A       .       PASS    AA=c;DP=104     GT:GQ:DP        0|1:100:29      0|0:53:16       0|0:100:56
+6      102165259       rs510536        C       A       .       PASS    AA=C;DP=105     GT:GQ:DP        0|1:100:29      0|0:53:16       0|0:100:58
+6      41162969        .       G       C       .       PASS    AA=G;DP=106     GT:GQ:DP        0|1:100:29      0|0:53:16       0|0:100:60
+10     20744077        .       C       G       .       PASS    AA=C;DP=104     GT:GQ:DP        0|1:100:29      0|0:53:16       0|0:100:62
+11     26805878        .       A       G       .       PASS    AA=A;DP=129     GT:GQ:DP        0|1:100:29      0|0:53:16       0|0:100:84
+14     91386445        rs8006831       T       C       .       PASS    AA=t;DP=107     GT:GQ:DP        0|1:100:29      0|0:53:17       0|0:100:61
+3      105389338       .       G       T       .       PASS    AA=G;DP=123     GT:GQ:DP        0|1:100:29      0|0:53:17       0|0:100:80
+6      118386585       .       C       T       .       PASS    AA=C;DP=119     GT:GQ:DP        0|1:100:29      0|0:53:18       0|0:100:70
+13     22706450        .       C       G       .       PASS    AA=c;DP=91      GT:GQ:DP        0|1:100:29      0|0:53:18       0|0:90:30
+6      87947184        rs2147917       C       T       .       PASS    AA=C;DP=132     GT:GQ:DP        0|1:100:29      0|0:54:22       0|0:100:82
+2      73736576        rs12611544      A       G       .       PASS    AA=a;DP=146     GT:GQ:DP        0|1:100:29      0|0:56:17       0|0:100:49
+10     764326  rs10904552      A       G       .       PASS    AA=.;DP=104     GT:GQ:DP        0|1:100:29      0|0:56:17       0|0:100:58
+6      8320319 .       A       G       .       PASS    AA=a;DP=107     GT:GQ:DP        0|1:100:29      0|0:56:17       0|0:100:58
+16     85331893        rs416841        C       G       .       PASS    AA=c;DP=103     GT:GQ:DP        0|1:100:29      0|0:56:17       0|0:100:60
+5      98823625        .       T       C       .       PASS    AA=T;DP=108     GT:GQ:DP        0|1:100:29      0|0:56:17       0|0:100:62
+4      156326510       rs59071176      G       A       .       PASS    AA=T;DP=110     GT:GQ:DP        0|1:100:29      0|0:56:17       0|0:100:66
+11     96859601        .       C       T       .       PASS    AA=C;DP=112     GT:GQ:DP        0|1:100:29      0|0:56:17       0|0:100:68
+12     61583135        .       C       A       .       PASS    AA=C;DP=114     GT:GQ:DP        0|1:100:29      0|0:56:17       0|0:100:69
+16     5962202 rs735918        T       C       .       PASS    AA=C;DP=120     GT:GQ:DP        0|1:100:29      0|0:56:18       0|0:100:73
+17     72560267        rs4789411       G       A       .       PASS    AA=g;DP=124     GT:GQ:DP        0|1:100:29      0|0:56:18       0|0:100:77
+4      59215501        .       C       T       .       PASS    AA=C;DP=133     GT:GQ:DP        0|1:100:29      0|0:56:18       0|0:100:86
+8      135315119       .       G       T       .       PASS    AA=G;DP=109     GT:GQ:DP        0|1:100:29      0|0:58:24       0|0:100:56
+6      55592169        .       C       T       .       PASS    AA=C;DP=97      GT:GQ:DP        0|1:100:29      0|0:59:18       0|0:100:50
+17     51705053        .       T       A       .       PASS    AA=T;DP=106     GT:GQ:DP        0|1:100:29      0|0:59:18       0|0:100:60
+10     5165450 rs2186172       A       G       .       PASS    AA=N;DP=114     GT:GQ:DP        0|1:100:29      0|0:59:18       0|0:100:68
+15     88456601        rs7169036       A       G       .       PASS    AA=G;DP=107     GT:GQ:DP        0|1:100:29      0|0:59:19       0|0:100:49
+20     24589992        .       G       A       .       PASS    AA=g;DP=104     GT:GQ:DP        0|1:100:29      0|0:59:19       0|0:100:56
+3      96550923        .       C       A       .       PASS    AA=C;DP=108     GT:GQ:DP        0|1:100:29      0|0:59:19       0|0:100:61
+10     27028264        rs7896301       A       T       .       PASS    AA=T;DP=113     GT:GQ:DP        0|1:100:29      0|0:59:19       0|0:100:64
+11     77550788        .       A       T       .       PASS    AA=A;DP=125     GT:GQ:DP        0|1:100:29      0|0:59:19       0|0:100:76
+2      139456710       rs6704911       G       A       .       PASS    AA=A;DP=85      GT:GQ:DP        0|1:100:29      0|0:59:19       0|0:78:28
+3      8382586 .       A       T       .       PASS    AA=T;DP=121     GT:GQ:DP        0|1:100:29      0|0:59:21       0|0:100:72
+17     63703466        rs28690397      A       G       .       PASS    AA=a;DP=117     GT:GQ:DP        0|1:100:29      0|0:60:24       0|0:100:54
+5      178213634       rs6877198       G       T       .       PASS    AA=T;DP=150     GT:GQ:DP        0|1:100:29      0|0:60:30       0|0:100:54
+2      122273545       .       C       T       .       PASS    AA=C;DP=127     GT:GQ:DP        0|1:100:29      0|0:60:30       0|0:100:69
+22     44956144        rs11704856      A       T       .       PASS    AA=A;DP=147     GT:GQ:DP        0|1:100:29      0|0:61:24       0|0:100:46
+3      180489327       rs9290675       T       C       .       PASS    AA=T;DP=138     GT:GQ:DP        0|1:100:29      0|0:61:28       0|0:100:79
+13     73195710        .       C       T       .       PASS    AA=C;DP=106     GT:GQ:DP        0|1:100:29      0|0:62:19       0|0:100:57
+6      81721140        .       T       G       .       PASS    AA=T;DP=111     GT:GQ:DP        0|1:100:29      0|0:62:19       0|0:100:63
+15     79607932        .       A       G       .       PASS    AA=A;DP=119     GT:GQ:DP        0|1:100:29      0|0:62:19       0|0:100:71
+2      211089731       rs10932339      T       C       .       PASS    AA=T;DP=125     GT:GQ:DP        0|1:100:29      0|0:62:19       0|0:100:79
+10     43434967        rs17154044      C       T       .       PASS    AA=T;DP=135     GT:GQ:DP        0|1:100:29      0|0:62:19       0|0:100:82
+11     19905063        rs12786324      G       C       .       PASS    AA=G;DP=133     GT:GQ:DP        0|1:100:29      0|0:62:19       0|0:100:86
+18     30140478        rs12454265      G       C       .       PASS    AA=G;DP=102     GT:GQ:DP        0|1:100:29      0|0:62:20       0|0:100:54
+17     10106299        rs1860001       T       G       .       PASS    AA=T;DP=118     GT:GQ:DP        0|1:100:29      0|0:62:20       0|0:100:71
+5      117082624       rs7728290       G       A       .       PASS    AA=G;DP=133     GT:GQ:DP        0|1:100:29      0|0:62:20       0|0:100:84
+6      12749060        rs2516213       C       T       .       PASS    AA=T;DP=109     GT:GQ:DP        0|1:100:29      0|0:62:21       0|0:100:60
+16     65311104        .       T       C       .       PASS    AA=T;DP=120     GT:GQ:DP        0|1:100:29      0|0:62:21       0|0:100:71
+16     5615056 .       A       G       .       PASS    AA=A;DP=133     GT:GQ:DP        0|1:100:29      0|0:62:21       0|0:100:78
+5      86328462        .       T       C       .       PASS    AA=T;DP=150     GT:GQ:DP        0|1:100:29      0|0:62:24       0|0:100:40
+11     126848825       rs61905797      A       G       .       PASS    AA=G;DP=120     GT:GQ:DP        0|1:100:29      0|0:63:25       0|0:100:69
+11     8295740 .       C       A       .       PASS    AA=C;DP=130     GT:GQ:DP        0|1:100:29      0|0:63:31       0|0:100:71
+11     132389507       .       G       T       .       PASS    AA=A;DP=141     GT:GQ:DP        0|1:100:29      0|0:63:31       0|0:100:83
+4      162004623       rs2193432       C       T       .       PASS    AA=C;DP=100     GT:GQ:DP        0|1:100:29      0|0:65:20       0|0:100:50
+3      65905254        .       C       T       .       PASS    AA=C;DP=103     GT:GQ:DP        0|1:100:29      0|0:65:20       0|0:100:54
+1      242473409       .       T       C       .       PASS    AA=T;DP=116     GT:GQ:DP        0|1:100:29      0|0:65:20       0|0:100:64
+8      59481111        .       G       A       .       PASS    AA=G;DP=120     GT:GQ:DP        0|1:100:29      0|0:65:20       0|0:100:70
+12     112037368       .       G       C       .       PASS    AA=C;DP=130     GT:GQ:DP        0|1:100:29      0|0:65:20       0|0:100:78
+4      153289118       .       G       A       .       PASS    AA=G;DP=129     GT:GQ:DP        0|1:100:29      0|0:65:20       0|0:100:81
+17     6234449 rs11657470      G       C       .       PASS    AA=G;DP=134     GT:GQ:DP        0|1:100:29      0|0:65:20       0|0:100:86
+14     89185174        rs2632185       G       A       .       PASS    AA=G;DP=135     GT:GQ:DP        0|1:100:29      0|0:65:20       0|0:100:89
+12     20464396        rs10770653      G       T       .       PASS    AA=G;DP=140     GT:GQ:DP        0|1:100:29      0|0:65:21       0|0:100:43
+2      220823658       rs6436195       C       T       .       PASS    AA=C;DP=143     GT:GQ:DP        0|1:100:29      0|0:65:21       0|0:100:51
+1      179162301       rs12128456      A       G       .       PASS    AA=A;DP=168;HM2 GT:GQ:DP        0|1:100:29      0|0:65:21       0|0:100:61
+5      23607396        .       A       C       .       PASS    AA=A;DP=114     GT:GQ:DP        0|1:100:29      0|0:65:21       0|0:100:66
+12     81331621        .       G       A       .       PASS    AA=G;DP=118     GT:GQ:DP        0|1:100:29      0|0:65:21       0|0:100:70
+3      18032986        rs9310538       A       G       .       PASS    AA=a;DP=123     GT:GQ:DP        0|1:100:29      0|0:65:21       0|0:100:77
+11     12181331        rs10831763      C       T       .       PASS    AA=T;DP=120     GT:GQ:DP        0|1:100:29      0|0:65:26       0|0:100:66
+21     24032001        rs8128893       A       G       .       PASS    AA=A;DP=119     GT:GQ:DP        0|1:100:29      0|0:67:27       0|0:100:63
+2      238164342       .       G       C       .       PASS    AA=c;DP=136     GT:GQ:DP        0|1:100:29      0|0:68:21       0|0:100:42
+11     10978276        rs901400        T       C       .       PASS    AA=t;DP=142     GT:GQ:DP        0|1:100:29      0|0:68:21       0|0:100:48
+7      98173712        .       G       A       .       PASS    AA=G;DP=104     GT:GQ:DP        0|1:100:29      0|0:68:21       0|0:100:55
+8      82674096        rs7017336       G       T       .       PASS    AA=G;DP=109     GT:GQ:DP        0|1:100:29      0|0:68:21       0|0:100:61
+4      166593264       .       C       A       .       PASS    AA=C;DP=116     GT:GQ:DP        0|1:100:29      0|0:68:21       0|0:100:64
+15     72879240        rs35015218      A       C       .       PASS    AA=A;DP=162     GT:GQ:DP        0|1:100:29      0|0:68:21       0|0:100:65
+6      97211887        rs1398160       G       A       .       PASS    AA=A;DP=114     GT:GQ:DP        0|1:100:29      0|0:68:21       0|0:100:71
+14     55717213        .       G       T       .       PASS    AA=G;DP=119     GT:GQ:DP        0|1:100:29      0|0:68:21       0|0:100:72
+5      154747252       .       G       A       .       PASS    AA=G;DP=122     GT:GQ:DP        0|1:100:29      0|0:68:21       0|0:100:72
+2      79628296        .       C       A       .       PASS    AA=C;DP=130     GT:GQ:DP        0|1:100:29      0|0:68:21       0|0:100:82
+3      10206799        .       A       G       .       PASS    AA=A;DP=134     GT:GQ:DP        0|1:100:29      0|0:68:21       0|0:100:85
+3      73941111        rs11924049      C       G       .       PASS    AA=C;DP=92      GT:GQ:DP        0|1:100:29      0|0:68:22       0|0:100:40
+1      163130820       rs10800056      G       A       .       PASS    AA=G;DP=141;HM2;HM3     GT:GQ:DP        0|1:100:29      0|0:68:22       0|0:100:45
+7      14848016        rs10261580      G       C       .       PASS    AA=G;DP=98      GT:GQ:DP        0|1:100:29      0|0:68:22       0|0:100:47
+8      105122997       rs13252142      T       C       .       PASS    AA=T;DP=99      GT:GQ:DP        0|1:100:29      0|0:68:22       0|0:100:47
+11     103800104       rs11600376      C       T       .       PASS    AA=T;DP=105     GT:GQ:DP        0|1:100:29      0|0:68:22       0|0:100:54
+6      121823595       rs9490277       C       T       .       PASS    AA=-;DP=112     GT:GQ:DP        0|1:100:29      0|0:68:22       0|0:100:59
+13     82187235        rs7981118       C       T       .       PASS    AA=T;DP=127     GT:GQ:DP        0|1:100:29      0|0:68:22       0|0:100:69
+8      95759437        .       C       T       .       PASS    AA=C;DP=132     GT:GQ:DP        0|1:100:29      0|0:68:22       0|0:100:82
+2      100103082       rs17023516      T       C       .       PASS    AA=T;DP=135     GT:GQ:DP        0|1:100:29      0|0:68:22       0|0:100:83
+12     103993495       rs12310047      A       T       .       PASS    AA=A;DP=116     GT:GQ:DP        0|1:100:29      0|0:68:23       0|0:100:56
+6      93671386        .       C       A       .       PASS    AA=C;DP=122     GT:GQ:DP        0|1:100:29      0|0:68:23       0|0:100:70
+1      96142798        rs10783028      A       G       .       PASS    AA=G;DP=125;HM2;HM3     GT:GQ:DP        0|1:100:29      0|0:68:23       0|0:100:74
+13     39289586        .       C       G       .       PASS    AA=C;DP=98      GT:GQ:DP        0|1:100:29      0|0:68:24       0|0:100:46
+6      115174792       .       A       T       .       PASS    AA=A;DP=104     GT:GQ:DP        0|1:100:29      0|0:68:28       0|0:100:46
+3      825415  rs4686163       A       T       .       PASS    AA=-;DP=139     GT:GQ:DP        0|1:100:29      0|0:69:28       0|0:100:86
+17     47250045        .       C       T       .       PASS    AA=C;DP=138     GT:GQ:DP        0|1:100:29      0|0:69:33       0|0:100:71
+7      91590626        rs2269727       C       A       .       PASS    AA=C;DP=126     GT:GQ:DP        0|1:100:29      0|0:70:28       0|0:100:62
+9      118063272       rs16933353      C       A       .       PASS    AA=C;DP=123     GT:GQ:DP        0|1:100:29      0|0:70:35       0|0:100:57
+11     3219249 rs11512095      T       C       .       PASS    AA=N;DP=100     GT:GQ:DP        0|1:100:29      0|0:71:22       0|0:100:50
+7      69909770        rs57275895      G       C       .       PASS    AA=G;DP=114     GT:GQ:DP        0|1:100:29      0|0:71:22       0|0:100:64
+2      18825252        rs13339895      G       C       .       PASS    AA=G;DP=116     GT:GQ:DP        0|1:100:29      0|0:71:22       0|0:100:65
+11     5993811 rs7395684       C       T       .       PASS    AA=C;DP=121     GT:GQ:DP        0|1:100:29      0|0:71:22       0|0:100:67
+9      113512568       rs7022896       C       G       .       PASS    AA=G;DP=127     GT:GQ:DP        0|1:100:29      0|0:71:22       0|0:100:68
+3      60609490        rs58336366      A       C       .       PASS    AA=A;DP=126     GT:GQ:DP        0|1:100:29      0|0:71:22       0|0:100:75
+13     101415051       rs7997423       G       A       .       PASS    AA=A;DP=127     GT:GQ:DP        0|1:100:29      0|0:71:22       0|0:100:76
+2      9736625 rs6737035       C       T       .       PASS    AA=C;DP=131     GT:GQ:DP        0|1:100:29      0|0:71:22       0|0:100:80
+15     21550223        .       C       G       .       PASS    AA=C;DP=134     GT:GQ:DP        0|1:100:29      0|0:71:22       0|0:100:83
+22     35338624        rs6000350       A       G       .       PASS    AA=G;DP=133     GT:GQ:DP        0|1:100:29      0|0:71:22       0|0:100:88
+21     31021200        rs12627008      A       G       .       PASS    AA=G;DP=106     GT:GQ:DP        0|1:100:29      0|0:71:23       0|0:100:52
+7      106811608       .       G       C       .       PASS    AA=G;DP=122     GT:GQ:DP        0|1:100:29      0|0:71:23       0|0:100:73
+11     94236995        .       A       G       .       PASS    AA=A;DP=128     GT:GQ:DP        0|1:100:29      0|0:71:23       0|0:100:76
+15     95068379        .       G       A       .       PASS    AA=T;DP=106     GT:GQ:DP        0|1:100:29      0|0:71:24       0|0:100:42
+11     82985330        rs17145676      A       G       .       PASS    AA=A;DP=120     GT:GQ:DP        0|1:100:29      0|0:71:24       0|0:100:68
+12     125749597       rs1798809       T       C       .       PASS    AA=C;DP=140     GT:GQ:DP        0|1:100:29      0|0:71:25       0|0:100:86
+16     66930569        rs13332143      C       T       .       PASS    AA=C;DP=147     GT:GQ:DP        0|1:100:29      0|0:74:23       0|0:100:34
+13     108068358       .       A       C       .       PASS    AA=A;DP=143     GT:GQ:DP        0|1:100:29      0|0:74:23       0|0:100:47
+17     68353139        .       T       C       .       PASS    AA=T;DP=104     GT:GQ:DP        0|1:100:29      0|0:74:23       0|0:100:52
+2      38751314        rs6751481       T       C       .       PASS    AA=C;DP=104     GT:GQ:DP        0|1:100:29      0|0:74:23       0|0:100:53
+15     47235375        rs60899981      C       T       .       PASS    AA=C;DP=133     GT:GQ:DP        0|1:100:29      0|0:74:23       0|0:100:80
+17     62230892        .       A       G       .       PASS    AA=A;DP=139     GT:GQ:DP        0|1:100:29      0|0:74:23       0|0:100:87
+5      58211622        rs468321        A       G       .       PASS    AA=G;DP=142     GT:GQ:DP        0|1:100:29      0|0:74:23       0|0:100:90
+1      222137182       rs1037952       T       C       .       PASS    AA=T;DP=120;HM2 GT:GQ:DP        0|1:100:29      0|0:74:24       0|0:100:68
+17     71884582        .       T       C       .       PASS    AA=T;DP=131     GT:GQ:DP        0|1:100:29      0|0:74:24       0|0:100:75
+13     114059255       .       T       C       .       PASS    AA=T;DP=132     GT:GQ:DP        0|1:100:29      0|0:74:24       0|0:100:81
+12     53967739        .       T       A       .       PASS    AA=.;DP=142     GT:GQ:DP        0|1:100:29      0|0:74:25       0|0:100:48
+6      32927585        rs58261944      A       G       .       PASS    AA=A;DP=124     GT:GQ:DP        0|1:100:29      0|0:74:26       0|0:100:70
+14     47774513        .       T       C       .       PASS    AA=t;DP=124     GT:GQ:DP        0|1:100:29      0|0:75:25       0|0:100:70
+14     49011141        rs8015577       C       T       .       PASS    AA=T;DP=133     GT:GQ:DP        0|1:100:29      0|0:75:35       0|0:100:68
+19     23446375        rs58115157      T       A       .       PASS    AA=T;DP=137     GT:GQ:DP        0|1:100:29      0|0:77:24       0|0:100:38
+4      150158132       .       C       A       .       PASS    AA=C;DP=112     GT:GQ:DP        0|1:100:29      0|0:77:24       0|0:100:58
+2      22748068        rs10203319      A       G       .       PASS    AA=A;DP=117     GT:GQ:DP        0|1:100:29      0|0:77:24       0|0:100:61
+21     29037117        rs2832037       A       C       .       PASS    AA=C;DP=126     GT:GQ:DP        0|1:100:29      0|0:77:24       0|0:100:73
+13     35549086        rs9575247       A       G       .       PASS    AA=A;DP=131     GT:GQ:DP        0|1:100:29      0|0:77:24       0|0:100:77
+7      66783958        rs1024592       A       G       .       PASS    AA=A;DP=134     GT:GQ:DP        0|1:100:29      0|0:77:24       0|0:100:83
+10     108305629       rs11192952      G       A       .       PASS    AA=G;DP=136     GT:GQ:DP        0|1:100:29      0|0:77:25       0|0:100:41
+10     11720244        rs7903301       T       C       .       PASS    AA=T;DP=159     GT:GQ:DP        0|1:100:29      0|0:77:25       0|0:100:58
+7      91974138        .       T       C       .       PASS    AA=T;DP=125     GT:GQ:DP        0|1:100:29      0|0:77:25       0|0:100:70
+10     117404353       rs2420098       A       G       .       PASS    AA=A;DP=130     GT:GQ:DP        0|1:100:29      0|0:77:25       0|0:100:73
+4      97732248        .       G       A       .       PASS    AA=G;DP=124     GT:GQ:DP        0|1:100:29      0|0:77:25       0|0:100:74
+8      59839871        rs1568953       A       G       .       PASS    AA=G;DP=126     GT:GQ:DP        0|1:100:29      0|0:77:25       0|0:100:76
+16     20759517        .       G       A       .       PASS    AA=G;DP=108     GT:GQ:DP        0|1:100:29      0|0:77:26       0|0:100:54
+3      34771239        rs7653335       T       G       .       PASS    AA=T;DP=121     GT:GQ:DP        0|1:100:29      0|0:77:26       0|0:100:66
+2      141141348       .       T       C       .       PASS    AA=C;DP=130     GT:GQ:DP        0|1:100:29      0|0:77:26       0|0:100:75
+12     100874007       rs2373562       C       T       .       PASS    AA=C;DP=104     GT:GQ:DP        0|1:100:29      0|0:77:27       0|0:100:43
+12     28774786        .       G       T       .       PASS    AA=G;DP=161     GT:GQ:DP        0|1:100:29      0|0:78:30       0|0:100:57
+16     72013332        rs17372690      T       G       .       PASS    AA=T;DP=137     GT:GQ:DP        0|1:100:29      0|0:80:25       0|0:100:41
+6      81237221        .       T       C       .       PASS    AA=T;DP=99      GT:GQ:DP        0|1:100:29      0|0:80:25       0|0:100:44
+16     77448634        rs12935224      T       C       .       PASS    AA=T;DP=105     GT:GQ:DP        0|1:100:29      0|0:80:25       0|0:100:49
+4      174756506       .       C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        0|1:100:29      0|0:80:25       0|0:100:56
+17     39725759        .       T       C       .       PASS    AA=C;DP=111     GT:GQ:DP        0|1:100:29      0|0:80:25       0|0:100:57
+3      154885420       .       T       A       .       PASS    AA=T;DP=123     GT:GQ:DP        0|1:100:29      0|0:80:25       0|0:100:69
+1      41994128        .       C       T       .       PASS    AA=C;DP=128     GT:GQ:DP        0|1:100:29      0|0:80:25       0|0:100:70
+12     96038967        rs17026464      A       T       .       PASS    AA=A;DP=133     GT:GQ:DP        0|1:100:29      0|0:80:25       0|0:100:75
+2      13780421        .       A       G       .       PASS    AA=A;DP=130     GT:GQ:DP        0|1:100:29      0|0:80:25       0|0:100:77
+19     20761365        .       G       A       .       PASS    AA=G;DP=133     GT:GQ:DP        0|1:100:29      0|0:80:25       0|0:100:80
+3      163564695       .       T       A       .       PASS    AA=T;DP=99      GT:GQ:DP        0|1:100:29      0|0:80:26       0|0:100:47
+7      132943730       rs4728292       G       A       .       PASS    AA=A;DP=112     GT:GQ:DP        0|1:100:29      0|0:80:26       0|0:100:61
+6      97587387        rs1766458       G       A       .       PASS    AA=A;DP=118     GT:GQ:DP        0|1:100:29      0|0:80:26       0|0:100:63
+11     12603717        rs61879781      C       T       .       PASS    AA=C;DP=118     GT:GQ:DP        0|1:100:29      0|0:80:26       0|0:100:65
+8      137847910       rs2582477       C       T       .       PASS    AA=C;DP=118     GT:GQ:DP        0|1:100:29      0|0:80:26       0|0:100:65
+3      16255690        .       C       G       .       PASS    AA=C;DP=140     GT:GQ:DP        0|1:100:29      0|0:80:26       0|0:100:86
+10     78708486        rs7093023       C       T       .       PASS    AA=C;DP=144     GT:GQ:DP        0|1:100:29      0|0:80:26       0|0:100:88
+1      185238436       .       G       T       .       PASS    AA=G;DP=132     GT:GQ:DP        0|1:100:29      0|0:80:27       0|0:100:74
+17     12656274        rs62060412      C       G       .       PASS    AA=C;DP=137     GT:GQ:DP        0|1:100:29      0|0:80:29       0|0:100:80
+1      101596912       rs11164176      G       A       .       PASS    AA=G;DP=168;HM2 GT:GQ:DP        0|1:100:29      0|0:82:33       0|0:100:57
+6      84422197        rs6940118       T       C       .       PASS    AA=T;DP=146     GT:GQ:DP        0|1:100:29      0|0:83:26       0|0:100:53
+18     56255838        .       A       G       .       PASS    AA=a;DP=117     GT:GQ:DP        0|1:100:29      0|0:83:26       0|0:100:61
+18     5824659 .       C       G       .       PASS    AA=C;DP=122     GT:GQ:DP        0|1:100:29      0|0:83:26       0|0:100:67
+5      66262532        .       T       G       .       PASS    AA=T;DP=128     GT:GQ:DP        0|1:100:29      0|0:83:26       0|0:100:71
+7      32541464        rs6959103       A       T       .       PASS    AA=A;DP=130     GT:GQ:DP        0|1:100:29      0|0:83:26       0|0:100:72
+2      74889738        .       C       T       .       PASS    AA=c;DP=128     GT:GQ:DP        0|1:100:29      0|0:83:26       0|0:100:73
+8      73378475        rs11778198      A       G       .       PASS    AA=A;DP=124     GT:GQ:DP        0|1:100:29      0|0:83:26       0|0:100:73
+19     58567335        rs7253268       G       A       .       PASS    AA=A;DP=132     GT:GQ:DP        0|1:100:29      0|0:83:26       0|0:100:78
+14     33633537        rs17102182      T       C       .       PASS    AA=T;DP=134     GT:GQ:DP        0|1:100:29      0|0:83:26       0|0:100:82
+7      30317280        rs7804225       G       A       .       PASS    AA=A;DP=136     GT:GQ:DP        0|1:100:29      0|0:83:26       0|0:100:82
+5      67850769        rs17257827      A       G       .       PASS    AA=A;DP=147     GT:GQ:DP        0|1:100:29      0|0:83:27       0|0:100:38
+10     73849835        rs7072132       T       C       .       PASS    AA=T;DP=121     GT:GQ:DP        0|1:100:29      0|0:83:27       0|0:100:64
+2      76182337        .       C       T       .       PASS    AA=c;DP=120     GT:GQ:DP        0|1:100:29      0|0:83:27       0|0:100:66
+18     74586783        rs8086303       A       G       .       PASS    AA=A;DP=132     GT:GQ:DP        0|1:100:29      0|0:83:27       0|0:100:77
+8      19266064        rs35319139      A       G       .       PASS    AA=A;DP=148     GT:GQ:DP        0|1:100:29      0|0:83:27       0|0:100:94
+6      66304367        rs11962539      C       T       .       PASS    AA=C;DP=123     GT:GQ:DP        0|1:100:29      0|0:83:28       0|0:100:66
+18     42531108        rs4402660       A       G       .       PASS    AA=A;DP=130     GT:GQ:DP        0|1:100:29      0|0:83:28       0|0:100:74
+8      62577441        rs16918879      C       G       .       PASS    AA=C;DP=128     GT:GQ:DP        0|1:100:29      0|0:83:28       0|0:100:75
+4      12804280        .       C       T       .       PASS    AA=C;DP=141     GT:GQ:DP        0|1:100:29      0|0:84:34       0|0:100:77
+13     19008195        rs3933766       A       G       .       PASS    AA=a;DP=148     GT:GQ:DP        0|1:100:29      0|0:86:27       0|0:100:46
+7      94137455        .       A       G       .       PASS    AA=A;DP=130     GT:GQ:DP        0|1:100:29      0|0:86:27       0|0:100:76
+4      58843856        .       A       C       .       PASS    AA=A;DP=136     GT:GQ:DP        0|1:100:29      0|0:86:27       0|0:100:80
+10     34819137        rs773983        C       T       .       PASS    AA=C;DP=158     GT:GQ:DP        0|1:100:29      0|0:86:28       0|0:100:58
+1      166757066       rs10918917      G       A       .       PASS    AA=A;DP=118;HM2;HM3     GT:GQ:DP        0|1:100:29      0|0:86:28       0|0:100:64
+7      122503569       rs10953968      G       A       .       PASS    AA=a;DP=145     GT:GQ:DP        0|1:100:29      0|0:86:28       0|0:100:91
+18     41845283        rs59275428      T       C       .       PASS    AA=T;DP=125     GT:GQ:DP        0|1:100:29      0|0:86:29       0|0:100:68
+6      115855798       rs12201184      T       C       .       PASS    AA=N;DP=132     GT:GQ:DP        0|1:100:29      0|0:86:29       0|0:100:77
+X      2234740 .       G       A       .       PASS    AA=N;DP=92      GT:GQ:DP        0|1:100:29      0|0:86:30       0|0:87:29
+6      54331459        .       A       C       .       PASS    AA=A;DP=141     GT:GQ:DP        0|1:100:29      0|0:88:34       0|0:100:80
+16     57628170        rs12923985      C       T       .       PASS    AA=C;DP=138     GT:GQ:DP        0|1:100:29      0|0:89:28       0|0:100:41
+10     57463252        rs9416416       T       C       .       PASS    AA=T;DP=111     GT:GQ:DP        0|1:100:29      0|0:89:28       0|0:100:54
+6      5294828 rs811274        A       G       .       PASS    AA=A;DP=118     GT:GQ:DP        0|1:100:29      0|0:89:28       0|0:100:60
+3      188685126       rs7636938       C       T       .       PASS    AA=C;DP=147     GT:GQ:DP        0|1:100:29      0|0:89:28       0|0:100:89
+22     24240667        rs79091 G       A       .       PASS    AA=G;DP=172     GT:GQ:DP        0|1:100:29      0|0:89:29       0|0:100:59
+8      34162713        rs16881694      C       A       .       PASS    AA=C;DP=120     GT:GQ:DP        0|1:100:29      0|0:89:30       0|0:100:61
+8      116441272       rs16887387      C       G       .       PASS    AA=c;DP=143     GT:GQ:DP        0|1:100:29      0|0:89:30       0|0:100:82
+11     35802358        .       A       G       .       PASS    AA=A;DP=149     GT:GQ:DP        0|1:100:29      0|0:92:29       0|0:100:52
+22     32127883        rs12160463      C       A       .       PASS    AA=C;DP=120     GT:GQ:DP        0|1:100:29      0|0:92:29       0|0:100:62
+2      83805176        rs10084276      A       G       .       PASS    AA=G;DP=138     GT:GQ:DP        0|1:100:29      0|0:92:30       0|0:100:78
+16     50369368        rs28446416      G       A       .       PASS    AA=G;DP=141     GT:GQ:DP        0|1:100:29      0|0:92:30       0|0:100:83
+18     51729874        .       C       T       .       PASS    AA=C;DP=127     GT:GQ:DP        0|1:100:29      0|0:95:30       0|0:100:66
+8      141048633       rs7017074       C       T       .       PASS    AA=C;DP=140     GT:GQ:DP        0|1:100:29      0|0:95:30       0|0:100:66
+11     23209139        rs56736520      C       T       .       PASS    AA=C;DP=125     GT:GQ:DP        0|1:100:29      0|0:95:30       0|0:100:67
+19     7752228 .       G       T       .       PASS    AA=G;DP=139     GT:GQ:DP        0|1:100:29      0|0:95:30       0|0:100:80
+15     97753089        .       G       A       .       PASS    AA=A;DP=104     GT:GQ:DP        0|1:100:29      0|0:95:31       0|0:100:45
+8      140225507       rs7015473       T       C       .       PASS    AA=T;DP=115     GT:GQ:DP        0|1:100:29      0|0:95:31       0|0:100:54
+8      102625177       rs7838699       T       C       .       PASS    AA=T;DP=156     GT:GQ:DP        0|1:100:29      0|0:95:32       0|0:100:91
+22     24571631        .       A       C       .       PASS    AA=A;DP=152     GT:GQ:DP        0|1:100:29      0|0:98:31       0|0:100:42
+5      57369650        .       A       G       .       PASS    AA=A;DP=123     GT:GQ:DP        0|1:100:29      0|0:98:31       0|0:100:62
+3      115673562       .       G       A       .       PASS    AA=G;DP=122     GT:GQ:DP        0|1:100:29      0|0:98:31       0|0:63:21
+11     21966731        rs11026360      T       A       .       PASS    AA=T;DP=133     GT:GQ:DP        0|1:100:29      0|0:98:32       0|0:100:73
+5      124411482       .       C       T       .       PASS    AA=C;DP=155     GT:GQ:DP        0|1:100:29      0|0:98:38       0|0:100:90
+4      33991079        rs28706115      G       A       .       PASS    AA=G;DP=103     GT:GQ:DP        0|1:100:29      0|1:100:13      0|0:100:59
+11     2869522 rs400643        G       T       .       PASS    AA=T;DP=171     GT:GQ:DP        0|1:100:29      0|1:100:16      0|0:100:62
+6      129031463       rs699425        G       A       .       PASS    AA=A;DP=118     GT:GQ:DP        0|1:100:29      0|1:100:16      0|0:100:74
+13     33173390        rs7317018       G       A       .       PASS    AA=A;DP=106     GT:GQ:DP        0|1:100:29      0|1:100:18      0|0:100:57
+1      216381366       rs528635        C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        0|1:100:29      0|1:100:18      0|0:96:34
+2      28124939        rs13402420      T       G       .       PASS    AA=T;DP=113     GT:GQ:DP        0|1:100:29      0|1:100:19      0|0:100:62
+22     23199659        rs2032115       A       G       .       PASS    AA=G;DP=110     GT:GQ:DP        0|1:100:29      0|1:100:20      0|0:100:61
+6      18647848        rs4716283       C       T       .       PASS    AA=C;DP=119     GT:GQ:DP        0|1:100:29      0|1:100:20      0|0:100:72
+2      238839179       .       T       C       .       PASS    AA=C;DP=134     GT:GQ:DP        0|1:100:29      0|1:100:20      0|0:100:86
+4      10302468        rs4626194       A       G       .       PASS    AA=G;DP=125     GT:GQ:DP        0|1:100:29      0|1:100:21      0|0:100:76
+2      28327827        rs4666045       G       A       .       PASS    AA=A;DP=118     GT:GQ:DP        0|1:100:29      0|1:100:22      0|0:100:65
+2      103345689       rs10469858      A       G       .       PASS    AA=A;DP=112     GT:GQ:DP        0|1:100:29      0|1:100:23      0|0:100:60
+20     17405170        rs2328149       G       A       .       PASS    AA=G;DP=120     GT:GQ:DP        0|1:100:29      0|1:100:23      0|0:100:68
+1      214246512       rs7531584       C       T       .       PASS    AA=T;DP=125;HM2;HM3     GT:GQ:DP        0|1:100:29      0|1:100:23      0|0:100:76
+2      40802346        rs2192820       G       T       .       PASS    AA=G;DP=136     GT:GQ:DP        0|1:100:29      0|1:100:23      0|0:100:85
+8      26492993        rs920697        C       T       .       PASS    AA=C;DP=122     GT:GQ:DP        0|1:100:29      0|1:100:23      0|0:70:31
+8      58252235        rs12375301      A       G       .       PASS    AA=G;DP=106     GT:GQ:DP        0|1:100:29      0|1:100:24      0|0:100:51
+9      113984327       rs10125827      C       T       .       PASS    AA=C;DP=112     GT:GQ:DP        0|1:100:29      0|1:100:24      0|0:100:61
+1      221043619       .       G       A       .       PASS    AA=G;DP=121     GT:GQ:DP        0|1:100:29      0|1:100:24      0|0:100:70
+7      103392020       rs6976337       T       C       .       PASS    AA=T;DP=141     GT:GQ:DP        0|1:100:29      0|1:100:25      0|0:100:43
+13     107329001       rs1818361       C       T       .       PASS    AA=c;DP=131     GT:GQ:DP        0|1:100:29      0|1:100:25      0|0:93:35
+11     82479859        rs10898076      C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        0|1:100:29      0|1:100:26      0|0:100:59
+7      147843091       rs2538476       T       C       .       PASS    AA=C;DP=169     GT:GQ:DP        0|1:100:29      0|1:100:28      0|0:100:106
+3      102319163       rs35358657      C       A       .       PASS    AA=A;DP=157     GT:GQ:DP        0|1:100:29      0|1:100:29      0|0:100:52
+17     27015945        rs172718        T       A       .       PASS    AA=T;DP=113     GT:GQ:DP        0|1:100:29      0|1:100:29      0|0:100:55
+3      22975932        .       A       T       .       PASS    AA=A;DP=136     GT:GQ:DP        0|1:100:29      0|1:100:34      0|0:100:74
+5      108007478       rs4957775       G       A       .       PASS    AA=G;DP=127     GT:GQ:DP        0|1:100:29      0|1:100:35      0|0:100:63
+8      121086221       .       A       G       .       PASS    AA=A;DP=153     GT:GQ:DP        0|1:100:29      0|1:100:38      0|0:100:44
+13     104844515       rs7324448       C       T       .       PASS    AA=C;DP=147     GT:GQ:DP        0|1:100:29      0|1:100:40      0|0:100:79
+16     88492453        .       A       G       .       PASS    AA=A;DP=132     GT:GQ:DP        0|1:100:29      0|1:29:10       0|0:100:47
+10     125729374       rs28407862      A       G       .       PASS    AA=A;DP=117     GT:GQ:DP        0|1:100:29      0|1:29:16       0|0:100:71
+4      137895349       .       G       A       .       PASS    AA=A;DP=117     GT:GQ:DP        0|1:100:29      0|1:32:16       0|0:93:32
+18     71165153        rs10460109      T       C       .       PASS    AA=C;DP=132     GT:GQ:DP        0|1:100:29      0|1:37:20       0|0:100:78
+6      168486515       rs9364438       G       A       .       PASS    AA=G;DP=101     GT:GQ:DP        0|1:100:29      0|1:38:12       0|0:100:59
+11     107009177       rs10789627      C       T       .       PASS    AA=C;DP=85      GT:GQ:DP        0|1:100:29      0|1:46:14       0|0:100:45
+11     61523145        rs4313591       C       T       .       PASS    AA=C;DP=145     GT:GQ:DP        0|1:100:29      0|1:49:31       0|0:100:89
+19     56045214        rs266866        C       G       .       PASS    AA=G;DP=120     GT:GQ:DP        0|1:100:29      0|1:51:13       0|0:100:79
+5      138055759       rs10052293      G       A       .       PASS    AA=A;DP=135     GT:GQ:DP        0|1:100:29      0|1:58:15       0|0:100:91
+12     31413830        .       C       T       .       PASS    AA=C;DP=134     GT:GQ:DP        0|1:100:29      0|1:59:21       0|0:100:84
+1      144345695       rs10752829      C       G       .       PASS    AA=c;DP=121;HM2;HM3     GT:GQ:DP        0|1:100:29      0|1:60:21       0|0:100:71
+18     3284890 rs1662825       C       G       .       PASS    AA=C;DP=110     GT:GQ:DP        0|1:100:29      0|1:65:13       0|0:100:67
+5      75798553        rs4333298       C       T       .       PASS    AA=C;DP=130     GT:GQ:DP        0|1:100:29      0|1:69:23       0|0:100:82
+16     26856186        rs12921065      G       A       .       PASS    AA=G;DP=110     GT:GQ:DP        0|1:100:29      0|1:70:13       0|0:100:68
+9      107185730       rs12342542      T       C       .       PASS    AA=C;DP=125     GT:GQ:DP        0|1:100:29      0|1:72:12       0|0:100:42
+14     92931201        .       T       C       .       PASS    AA=T;DP=109     GT:GQ:DP        0|1:100:29      0|1:72:17       0|0:100:62
+2      215421821       rs13421904      C       T       .       PASS    AA=C;DP=121     GT:GQ:DP        0|1:100:29      0|1:72:17       0|0:100:79
+19     60262671        .       A       G       .       PASS    AA=G;DP=110     GT:GQ:DP        0|1:100:29      0|1:74:8        0|0:100:70
+10     68826270        .       C       T       .       PASS    AA=C;DP=119     GT:GQ:DP        0|1:100:29      0|1:77:24       0|0:100:67
+13     19882808        rs7330723       G       C       .       PASS    AA=C;DP=115     GT:GQ:DP        0|1:100:29      0|1:79:19       0|0:100:68
+16     67236247        rs11644435      A       G       .       PASS    AA=A;DP=87      GT:GQ:DP        0|1:100:29      0|1:7:12        0|0:100:37
+12     101546807       rs703569        A       G       .       PASS    AA=A;DP=115     GT:GQ:DP        0|1:100:29      0|1:80:19       0|0:100:67
+16     71777334        .       A       C       .       PASS    AA=A;DP=131     GT:GQ:DP        0|1:100:29      0|1:82:19       0|0:100:81
+10     48055002        rs2607871       T       G       .       PASS    AA=t;DP=130     GT:GQ:DP        0|1:100:29      0|1:82:21       0|0:100:82
+13     102128719       rs3806  G       A       .       PASS    AA=A;DP=95      GT:GQ:DP        0|1:100:29      0|1:84:21       0|0:100:43
+20     37697184        rs805947        C       T       .       PASS    AA=C;DP=108     GT:GQ:DP        0|1:100:29      0|1:88:17       0|0:100:62
+19     14575576        rs10426212      A       G       .       PASS    AA=G;DP=126     GT:GQ:DP        0|1:100:29      0|1:88:21       0|0:100:75
+1      221708537       rs6604715       C       G       .       PASS    AA=C;DP=127     GT:GQ:DP        0|1:100:29      0|1:89:23       0|0:100:74
+2      231223565       rs7590845       T       C       .       PASS    AA=T;DP=139     GT:GQ:DP        0|1:100:29      0|1:89:29       0|0:100:43
+3      195309839       rs4687521       T       C       .       PASS    AA=C;DP=138     GT:GQ:DP        0|1:100:29      0|1:90:25       0|0:100:84
+3      37608552        rs2070481       G       A       .       PASS    AA=g;DP=112     GT:GQ:DP        0|1:100:29      0|1:92:23       0|0:100:60
+12     39775959        rs1388673       A       C       .       PASS    AA=A;DP=134     GT:GQ:DP        0|1:100:29      0|1:96:26       0|0:100:82
+8      121627581       rs7017132       C       T       .       PASS    AA=C;DP=128     GT:GQ:DP        0|1:100:29      0|1:98:19       0|0:96:34
+8      143144242       rs11784680      A       G       .       PASS    AA=a;DP=88      GT:GQ:DP        0|1:100:29      1|1:12:5        0|1:100:42
+3      97260789        rs4462982       T       C       .       PASS    AA=C;DP=112     GT:GQ:DP        0|1:100:29      1|1:17:17       0|1:100:71
+16     48704154        rs6500285       G       A       .       PASS    AA=G;DP=101     GT:GQ:DP        0|1:100:29      1|1:23:14       0|1:100:58
+3      146477159       .       T       C       .       PASS    AA=T;DP=110     GT:GQ:DP        0|1:100:29      1|1:23:27       0|1:100:54
+20     56726525        rs2426777       T       C       .       PASS    AA=t;DP=127     GT:GQ:DP        0|1:100:29      1|1:24:9        0|1:100:75
+8      19169165        rs2139764       T       A       .       PASS    AA=T;DP=77      GT:GQ:DP        0|1:100:29      1|1:26:19       0|1:100:23
+4      103301507       rs151481        C       A       .       PASS    AA=A;DP=105     GT:GQ:DP        0|1:100:29      1|1:28:18       0|1:100:47
+12     89079114        rs2083260       G       A       .       PASS    AA=A;DP=129     GT:GQ:DP        0|1:100:29      1|1:30:22       0|1:100:77
+6      7015604 .       A       G       .       PASS    AA=A;DP=111     GT:GQ:DP        0|1:100:29      1|1:33:23       0|1:100:56
+1      216682637       rs1418556       C       T       .       PASS    AA=-;DP=100;HM2 GT:GQ:DP        0|1:100:29      1|1:34:18       0|1:100:47
+13     61427500        .       C       T       .       PASS    AA=T;DP=93      GT:GQ:DP        0|1:100:29      1|1:36:13       0|1:100:35
+2      81333814        rs12999523      T       G       .       PASS    AA=T;DP=121     GT:GQ:DP        0|1:100:29      1|1:36:31       0|1:100:63
+5      177844702       rs1106073       A       G       .       PASS    AA=a;DP=97      GT:GQ:DP        0|1:100:29      1|1:39:15       0|1:100:54
+11     118174388       rs583213        G       T       .       PASS    AA=-;DP=98      GT:GQ:DP        0|1:100:29      1|1:42:15       0|1:100:54
+16     59582360        rs6500169       T       G       .       PASS    AA=G;DP=114     GT:GQ:DP        0|1:100:29      1|1:42:15       0|1:100:63
+12     29620048        rs159686        A       G       .       PASS    AA=N;DP=141     GT:GQ:DP        0|1:100:29      1|1:44:32       0|1:100:69
+2      150738224       rs4667375       A       G       .       PASS    AA=G;DP=112     GT:GQ:DP        0|1:100:29      1|1:45:16       0|1:100:69
+10     109749804       rs11193838      G       C       .       PASS    AA=G;DP=103     GT:GQ:DP        0|1:100:29      1|1:45:17       0|1:100:56
+10     67011478        rs4345857       T       C       .       PASS    AA=C;DP=124     GT:GQ:DP        0|1:100:29      1|1:48:17       0|1:100:61
+19     18222295        rs10422545      A       G       .       PASS    AA=G;DP=114     GT:GQ:DP        0|1:100:29      1|1:48:17       0|1:100:69
+11     23469502        rs1960657       T       C       .       PASS    AA=t;DP=106     GT:GQ:DP        0|1:100:29      1|1:48:18       0|1:100:61
+1      30178047        rs448357        A       G       .       PASS    AA=N;DP=131;HM2;HM3     GT:GQ:DP        0|1:100:29      1|1:48:18       0|1:100:85
+8      10755471        rs17777835      T       C       .       PASS    AA=T;DP=129     GT:GQ:DP        0|1:100:29      1|1:48:20       0|1:100:81
+18     54863228        rs4458107       T       C       .       PASS    AA=t;DP=116     GT:GQ:DP        0|1:100:29      1|1:4:14        0|1:100:73
+3      58833586        .       G       T       .       PASS    AA=T;DP=96      GT:GQ:DP        0|1:100:29      1|1:4:8 0|1:100:59
+18     3518492 rs603464        G       A       .       PASS    AA=A;DP=142     GT:GQ:DP        0|1:100:29      1|1:50:29       0|1:100:42
+6      119720680       rs12206472      A       G       .       PASS    AA=a;DP=144     GT:GQ:DP        0|1:100:29      1|1:50:29       0|1:100:79
+8      127367773       rs7017806       A       T       .       PASS    AA=A;DP=98      GT:GQ:DP        0|1:100:29      1|1:51:18       0|1:100:51
+7      50090696        rs1508413       C       T       .       PASS    AA=T;DP=104     GT:GQ:DP        0|1:100:29      1|1:51:18       0|1:100:58
+7      125249506       rs28626618      A       T       .       PASS    AA=A;DP=115     GT:GQ:DP        0|1:100:29      1|1:54:19       0|1:100:72
+5      12015749        rs2895608       A       G       .       PASS    AA=N;DP=110     GT:GQ:DP        0|1:100:29      1|1:55:27       0|1:100:53
+1      40612940        rs1003710       A       G       .       PASS    AA=A;DP=138     GT:GQ:DP        0|1:100:29      1|1:57:21       0|1:100:46
+4      23993029        rs4441743       C       T       .       PASS    AA=C;DP=98      GT:GQ:DP        0|1:100:29      1|1:57:21       0|1:100:49
+12     95106974        rs4762137       C       T       .       PASS    AA=T;DP=99      GT:GQ:DP        0|1:100:29      1|1:57:21       0|1:100:51
+8      92427935        rs10088955      G       A       .       PASS    AA=G;DP=104     GT:GQ:DP        0|1:100:29      1|1:57:24       0|1:100:51
+21     20113032        rs9982296       A       G       .       PASS    AA=A;DP=100     GT:GQ:DP        0|1:100:29      1|1:59:21       0|1:100:41
+7      32342117        rs215654        A       G       .       PASS    AA=G;DP=88      GT:GQ:DP        0|1:100:29      1|1:60:21       0|1:100:39
+5      3786859 rs6897361       T       A       .       PASS    AA=T;DP=102     GT:GQ:DP        0|1:100:29      1|1:60:21       0|1:100:55
+1      1688667 rs4648826       C       G       .       PASS    AA=N;DP=125     GT:GQ:DP        0|1:100:29      1|1:60:21       0|1:100:76
+1      236226622       rs2487103       T       C       .       PASS    AA=C;DP=110;HM2 GT:GQ:DP        0|1:100:29      1|1:60:22       0|1:100:64
+9      22251531        rs1751459       G       A       .       PASS    AA=A;DP=113     GT:GQ:DP        0|1:100:29      1|1:60:22       0|1:100:64
+3      172663379       rs12634193      T       C       .       PASS    AA=C;DP=101     GT:GQ:DP        0|1:100:29      1|1:60:23       0|1:100:50
+10     15402842        rs7921541       C       T       .       PASS    AA=T;DP=134     GT:GQ:DP        0|1:100:29      1|1:63:24       0|1:100:79
+16     13706527        rs2157066       G       C       .       PASS    AA=C;DP=132     GT:GQ:DP        0|1:100:29      1|1:63:25       0|1:100:77
+20     49525694        rs6021231       T       C       .       PASS    AA=C;DP=120     GT:GQ:DP        0|1:100:29      1|1:65:25       0|1:100:66
+13     79946536        rs7982767       A       G       .       PASS    AA=G;DP=123     GT:GQ:DP        0|1:100:29      1|1:66:24       0|1:100:68
+11     29247482        rs10835504      C       T       .       PASS    AA=T;DP=118     GT:GQ:DP        0|1:100:29      1|1:66:25       0|1:100:64
+1      230875698       rs4991731       A       G       .       PASS    AA=G;DP=109     GT:GQ:DP        0|1:100:29      1|1:69:24       0|1:100:43
+4      156447473       rs11929964      C       T       .       PASS    AA=C;DP=116     GT:GQ:DP        0|1:100:29      1|1:69:24       0|1:100:63
+11     109692304       rs7130050       T       C       .       PASS    AA=C;DP=116     GT:GQ:DP        0|1:100:29      1|1:69:26       0|1:100:62
+12     61527168        rs1498662       G       A       .       PASS    AA=g;DP=121     GT:GQ:DP        0|1:100:29      1|1:72:27       0|1:100:65
+4      168897298       rs12505894      C       A       .       PASS    AA=C;DP=124     GT:GQ:DP        0|1:100:29      1|1:75:27       0|1:100:68
+18     37505351        rs2010933       A       G       .       PASS    AA=G;DP=108     GT:GQ:DP        0|1:100:29      1|1:75:28       0|1:100:38
+1      234503196       rs2812477       A       G       .       PASS    AA=G;DP=140;HM2;HM3     GT:GQ:DP        0|1:100:29      1|1:75:28       0|1:100:40
+8      96853893        rs3107047       G       A       .       PASS    AA=A;DP=115     GT:GQ:DP        0|1:100:29      1|1:75:28       0|1:100:60
+8      5493886 rs2725708       T       C       .       PASS    AA=T;DP=102     GT:GQ:DP        0|1:100:29      1|1:81:30       0|1:100:43
+3      16396677        rs2470506       C       T       .       PASS    AA=T;DP=125     GT:GQ:DP        0|1:100:29      1|1:84:29       0|1:100:68
+15     92035325        rs4489955       A       G       .       PASS    AA=A;DP=157     GT:GQ:DP        0|1:100:29      1|1:84:31       0|1:100:50
+6      75668442        .       T       C       .       PASS    AA=T;DP=113     GT:GQ:DP        0|1:100:30      0|0:100:32      0|0:100:51
+8      137034499       .       A       G       .       PASS    AA=A;DP=123     GT:GQ:DP        0|1:100:30      0|0:100:33      0|0:100:59
+2      148071408       .       G       C       .       PASS    AA=G;DP=140     GT:GQ:DP        0|1:100:30      0|0:100:33      0|0:100:78
+2      193704208       rs12617946      T       C       .       PASS    AA=C;DP=176     GT:GQ:DP        0|1:100:30      0|0:100:34      0|0:100:53
+2      29345118        .       A       G       .       PASS    AA=A;DP=159     GT:GQ:DP        0|1:100:30      0|0:100:34      0|0:100:53
+8      23929420        rs6994711       A       T       .       PASS    AA=T;DP=137     GT:GQ:DP        0|1:100:30      0|0:100:34      0|0:100:76
+7      82990100        .       C       G       .       PASS    AA=C;DP=152     GT:GQ:DP        0|1:100:30      0|0:100:34      0|0:100:87
+10     36667141        rs1624144       G       A       .       PASS    AA=G;DP=153     GT:GQ:DP        0|1:100:30      0|0:100:34      0|0:100:92
+3      96342341        rs11706860      G       C       .       PASS    AA=G;DP=158     GT:GQ:DP        0|1:100:30      0|0:100:35      0|0:100:48
+4      112759520       .       T       C       .       PASS    AA=T;DP=128     GT:GQ:DP        0|1:100:30      0|0:100:37      0|0:100:65
+2      88327213        .       C       T       .       PASS    AA=C;DP=185     GT:GQ:DP        0|1:100:30      0|0:100:39      0|0:100:62
+9      103202827       rs16920305      T       C       .       PASS    AA=T;DP=128     GT:GQ:DP        0|1:100:30      0|0:100:40      0|0:100:57
+6      71051223        .       C       G       .       PASS    AA=C;DP=151     GT:GQ:DP        0|1:100:30      0|0:100:40      0|0:100:82
+15     50652363        rs61491450      A       G       .       PASS    AA=a;DP=172     GT:GQ:DP        0|1:100:30      0|0:100:42      0|0:100:57
+7      1955143 rs11760932      C       A       .       PASS    AA=C;DP=128     GT:GQ:DP        0|1:100:30      0|0:12:13       0|0:100:69
+22     29851404        rs2240432       G       A       .       PASS    AA=a;DP=115     GT:GQ:DP        0|1:100:30      0|0:21:12       0|0:100:76
+12     117470729       rs7297500       T       C       .       PASS    AA=T;DP=105     GT:GQ:DP        0|1:100:30      0|0:24:17       0|0:100:59
+9      78183138        .       A       C       .       PASS    AA=A;DP=121     GT:GQ:DP        0|1:100:30      0|0:24:19       0|0:100:69
+4      156137065       .       A       G       .       PASS    AA=A;DP=79      GT:GQ:DP        0|1:100:30      0|0:26:14       0|0:66:22
+6      65885983        .       C       A       .       PASS    AA=A;DP=110     GT:GQ:DP        0|1:100:30      0|0:27:16       0|0:100:67
+7      143444550       rs2961151       G       A       .       PASS    AA=.;DP=113     GT:GQ:DP        0|1:100:30      0|0:29:19       0|0:100:68
+2      20657495        .       G       A       .       PASS    AA=G;DP=124     GT:GQ:DP        0|1:100:30      0|0:29:8        0|0:100:83
+3      78725740        rs11706918      A       G       .       PASS    AA=a;DP=113     GT:GQ:DP        0|1:100:30      0|0:30:17       0|0:100:65
+2      4275906 .       C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        0|1:100:30      0|0:32:18       0|0:100:66
+11     650645  .       C       T       .       PASS    AA=c;DP=133     GT:GQ:DP        0|1:100:30      0|0:32:9        0|0:100:95
+18     58889525        rs7237215       G       T       .       PASS    AA=G;DP=131     GT:GQ:DP        0|1:100:30      0|0:33:24       0|0:100:77
+10     32461453        .       C       T       .       PASS    AA=C;DP=95      GT:GQ:DP        0|1:100:30      0|0:35:10       0|0:100:57
+9      76480812        .       G       A       .       PASS    AA=g;DP=100     GT:GQ:DP        0|1:100:30      0|0:35:10       0|0:100:60
+5      135317906       .       T       A       .       PASS    AA=T;DP=121     GT:GQ:DP        0|1:100:30      0|0:35:21       0|0:100:69
+4      134099302       .       A       C       .       PASS    AA=A;DP=126     GT:GQ:DP        0|1:100:30      0|0:37:14       0|0:100:81
+2      31193437        rs7575804       C       T       .       PASS    AA=C;DP=98      GT:GQ:DP        0|1:100:30      0|0:38:11       0|0:100:57
+1      48240037        rs56234118      T       C       .       PASS    AA=T;DP=120;HM3 GT:GQ:DP        0|1:100:30      0|0:38:11       0|0:100:81
+1      17828671        .       C       T       .       PASS    AA=c;DP=140     GT:GQ:DP        0|1:100:30      0|0:38:12       0|0:100:101
+6      14124810        .       T       C       .       PASS    AA=T;DP=90      GT:GQ:DP        0|1:100:30      0|0:38:12       0|0:100:49
+22     46342082        .       C       T       .       PASS    AA=C;DP=103     GT:GQ:DP        0|1:100:30      0|0:38:12       0|0:100:61
+10     105554003       .       A       G       .       PASS    AA=A;DP=115     GT:GQ:DP        0|1:100:30      0|0:38:12       0|0:100:72
+2      182930719       rs10173255      G       A       .       PASS    AA=G;DP=82      GT:GQ:DP        0|1:100:30      0|0:38:14       0|0:84:28
+4      172016041       .       C       T       .       PASS    AA=C;DP=136     GT:GQ:DP        0|1:100:30      0|0:38:25       0|0:100:84
+2      43268903        .       G       A       .       PASS    AA=G;DP=120     GT:GQ:DP        0|1:100:30      0|0:41:13       0|0:100:78
+15     20498775        rs12910040      T       C       .       PASS    AA=T;DP=99      GT:GQ:DP        0|1:100:30      0|0:41:14       0|0:100:44
+1      233748540       .       T       C       .       PASS    AA=C;DP=98      GT:GQ:DP        0|1:100:30      0|0:41:18       0|0:100:51
+4      109423713       .       G       A       .       PASS    AA=G;DP=97      GT:GQ:DP        0|1:100:30      0|0:41:19       0|0:100:50
+2      78770026        .       G       C       .       PASS    AA=N;DP=121     GT:GQ:DP        0|1:100:30      0|0:41:19       0|0:84:28
+3      163098526       .       T       C       .       PASS    AA=T;DP=118     GT:GQ:DP        0|1:100:30      0|0:41:23       0|0:100:65
+6      136515481       .       G       T       .       PASS    AA=G;DP=127     GT:GQ:DP        0|1:100:30      0|0:41:23       0|0:100:74
+19     7485191 .       G       T       .       PASS    AA=G;DP=137     GT:GQ:DP        0|1:100:30      0|0:41:27       0|0:100:81
+8      48424906        .       A       G       .       PASS    AA=A;DP=136     GT:GQ:DP        0|1:100:30      0|0:43:18       0|0:100:89
+14     88551239        .       C       A       .       PASS    AA=C;DP=122     GT:GQ:DP        0|1:100:30      0|0:43:21       0|0:93:31
+16     25202301        rs7206788       C       T       .       PASS    AA=T;DP=115     GT:GQ:DP        0|1:100:30      0|0:43:24       0|0:100:45
+17     4694795 .       G       T       .       PASS    AA=G;DP=131     GT:GQ:DP        0|1:100:30      0|0:43:24       0|0:100:77
+4      7359017 rs12500083      C       G       .       PASS    AA=C;DP=93      GT:GQ:DP        0|1:100:30      0|0:44:13       0|0:100:50
+11     131392436       rs2846323       C       T       .       PASS    AA=T;DP=98      GT:GQ:DP        0|1:100:30      0|0:44:13       0|0:100:58
+20     36279129        rs12329550      C       T       .       PASS    AA=C;DP=106     GT:GQ:DP        0|1:100:30      0|0:44:14       0|0:100:61
+6      67948901        rs9445840       A       G       .       PASS    AA=A;DP=105     GT:GQ:DP        0|1:100:30      0|0:44:14       0|0:100:61
+5      16650647        rs55721135      G       A       .       PASS    AA=g;DP=127     GT:GQ:DP        0|1:100:30      0|0:44:14       0|0:100:85
+14     93521210        rs11848017      A       T       .       PASS    AA=A;DP=137     GT:GQ:DP        0|1:100:30      0|0:44:14       0|0:100:95
+7      69617676        rs34178123      G       A       .       PASS    AA=A;DP=127     GT:GQ:DP        0|1:100:30      0|0:47:14       0|0:100:41
+2      8614782 rs11893574      G       A       .       PASS    AA=G;DP=92      GT:GQ:DP        0|1:100:30      0|0:47:14       0|0:100:49
+6      167299374       rs2769353       C       T       .       PASS    AA=c;DP=92      GT:GQ:DP        0|1:100:30      0|0:47:14       0|0:100:50
+12     124602102       .       T       C       .       PASS    AA=T;DP=102     GT:GQ:DP        0|1:100:30      0|0:47:14       0|0:100:53
+6      31838898        rs17201151      C       T       .       PASS    AA=C;DP=104     GT:GQ:DP        0|1:100:30      0|0:47:14       0|0:100:60
+6      79358850        rs11753657      A       C       .       PASS    AA=A;DP=105     GT:GQ:DP        0|1:100:30      0|0:47:14       0|0:100:63
+2      227801218       rs7608142       C       T       .       PASS    AA=C;DP=111     GT:GQ:DP        0|1:100:30      0|0:47:14       0|0:100:67
+7      92309157        rs57337700      T       C       .       PASS    AA=T;DP=112     GT:GQ:DP        0|1:100:30      0|0:47:15       0|0:100:52
+7      106532757       rs1004570       G       T       .       PASS    AA=T;DP=125     GT:GQ:DP        0|1:100:30      0|0:49:26       0|0:100:70
+1      191030780       rs60189214      G       C       .       PASS    AA=G;DP=113     GT:GQ:DP        0|1:100:30      0|0:50:15       0|0:100:70
+6      164910104       .       C       T       .       PASS    AA=C;DP=114     GT:GQ:DP        0|1:100:30      0|0:50:15       0|0:100:72
+10     125510943       .       A       T       .       PASS    AA=A;DP=117     GT:GQ:DP        0|1:100:30      0|0:50:15       0|0:100:75
+16     76936225        rs9940114       T       C       .       PASS    AA=C;DP=121     GT:GQ:DP        0|1:100:30      0|0:50:15       0|0:100:77
+14     24937538        .       G       A       .       PASS    AA=G;DP=92      GT:GQ:DP        0|1:100:30      0|0:50:16       0|0:100:45
+2      65371794        .       A       G       .       PASS    AA=A;DP=94      GT:GQ:DP        0|1:100:30      0|0:50:16       0|0:100:49
+20     52815102        .       C       T       .       PASS    AA=c;DP=102     GT:GQ:DP        0|1:100:30      0|0:50:16       0|0:100:54
+21     38981162        rs2836627       C       T       .       PASS    AA=C;DP=122     GT:GQ:DP        0|1:100:30      0|0:50:16       0|0:100:76
+10     88043062        rs2814311       A       G       .       PASS    AA=G;DP=85      GT:GQ:DP        0|1:100:30      0|0:50:16       0|0:81:27
+17     28789060        rs62068474      A       G       .       PASS    AA=G;DP=128     GT:GQ:DP        0|1:100:30      0|0:50:17       0|0:100:83
+13     39018528        rs8000770       A       G       .       PASS    AA=A;DP=106     GT:GQ:DP        0|1:100:30      0|0:50:18       0|0:100:61
+5      172507404       .       G       A       .       PASS    AA=G;DP=141     GT:GQ:DP        0|1:100:30      0|0:50:29       0|0:100:83
+8      123818139       rs58191844      G       A       .       PASS    AA=A;DP=123     GT:GQ:DP        0|1:100:30      0|0:51:21       0|0:100:70
+13     73627005        .       C       A       .       PASS    AA=C;DP=158     GT:GQ:DP        0|1:100:30      0|0:52:27       0|0:100:56
+7      52469484        .       T       A       .       PASS    AA=T;DP=91      GT:GQ:DP        0|1:100:30      0|0:53:16       0|0:100:45
+16     16180875        rs150465        C       T       .       PASS    AA=T;DP=118     GT:GQ:DP        0|1:100:30      0|0:53:16       0|0:100:74
+3      6464121 .       G       A       .       PASS    AA=G;DP=135     GT:GQ:DP        0|1:100:30      0|0:53:16       0|0:100:89
+19     58069995        .       C       T       .       PASS    AA=t;DP=102     GT:GQ:DP        0|1:100:30      0|0:53:17       0|0:100:39
+1      82169271        rs2148629       A       G       .       PASS    AA=A;DP=90      GT:GQ:DP        0|1:100:30      0|0:53:17       0|0:100:42
+3      125949035       .       A       G       .       PASS    AA=A;DP=125     GT:GQ:DP        0|1:100:30      0|0:53:17       0|0:100:80
+4      159583944       rs7376260       A       T       .       PASS    AA=A;DP=116     GT:GQ:DP        0|1:100:30      0|0:53:17       0|0:84:28
+5      133488014       rs28727387      C       G       .       PASS    AA=G;DP=113     GT:GQ:DP        0|1:100:30      0|0:54:18       0|0:100:64
+9      84423331        .       G       A       .       PASS    AA=G;DP=139     GT:GQ:DP        0|1:100:30      0|0:55:23       0|0:100:41
+11     34784691        rs58321690      G       T       .       PASS    AA=G;DP=132     GT:GQ:DP        0|1:100:30      0|0:56:17       0|0:100:39
+21     14986769        rs460512        T       A       .       PASS    AA=T;DP=102     GT:GQ:DP        0|1:100:30      0|0:56:17       0|0:100:51
+5      113241681       rs11241247      C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        0|1:100:30      0|0:56:17       0|0:100:63
+8      58027932        .       C       T       .       PASS    AA=C;DP=112     GT:GQ:DP        0|1:100:30      0|0:56:17       0|0:100:64
+2      240509233       rs11692365      A       T       .       PASS    AA=A;DP=127     GT:GQ:DP        0|1:100:30      0|0:56:17       0|0:100:80
+2      70110316        .       G       C       .       PASS    AA=G;DP=132     GT:GQ:DP        0|1:100:30      0|0:56:17       0|0:100:85
+3      153416080       rs16864082      G       A       .       PASS    AA=G;DP=131     GT:GQ:DP        0|1:100:30      0|0:56:18       0|0:100:39
+6      32704983        rs6929057       A       C       .       PASS    AA=C;DP=112     GT:GQ:DP        0|1:100:30      0|0:56:18       0|0:100:65
+1      88972691        .       A       G       .       PASS    AA=A;DP=98      GT:GQ:DP        0|1:100:30      0|0:56:19       0|0:100:50
+15     47324942        .       A       T       .       PASS    AA=A;DP=109     GT:GQ:DP        0|1:100:30      0|0:56:19       0|0:100:61
+18     43925630        rs7238076       C       A       .       PASS    AA=c;DP=139     GT:GQ:DP        0|1:100:30      0|0:56:24       0|0:100:45
+6      88977091        rs7769918       C       G       .       PASS    AA=G;DP=127     GT:GQ:DP        0|1:100:30      0|0:57:23       0|0:100:74
+2      78460609        .       A       G       .       PASS    AA=A;DP=107     GT:GQ:DP        0|1:100:30      0|0:59:18       0|0:100:61
+2      213045791       .       A       C       .       PASS    AA=A;DP=111     GT:GQ:DP        0|1:100:30      0|0:59:18       0|0:100:65
+7      157010876       rs10464131      G       A       .       PASS    AA=G;DP=118     GT:GQ:DP        0|1:100:30      0|0:59:18       0|0:100:71
+16     20840950        .       G       C       .       PASS    AA=G;DP=118     GT:GQ:DP        0|1:100:30      0|0:59:18       0|0:100:73
+1      118276563       .       A       G       .       PASS    AA=A;DP=123     GT:GQ:DP        0|1:100:30      0|0:59:18       0|0:100:76
+9      7063768 .       C       T       .       PASS    AA=C;DP=133     GT:GQ:DP        0|1:100:30      0|0:59:18       0|0:100:82
+10     57495204        rs1908342       G       T       .       PASS    AA=G;DP=92      GT:GQ:DP        0|1:100:30      0|0:59:19       0|0:100:44
+2      195232205       rs1837463       G       A       .       PASS    AA=G;DP=110     GT:GQ:DP        0|1:100:30      0|0:59:19       0|0:100:60
+19     55340394        rs8107344       C       G       .       PASS    AA=G;DP=115     GT:GQ:DP        0|1:100:30      0|0:59:19       0|0:100:64
+3      17053163        rs13316368      A       G       .       PASS    AA=A;DP=120     GT:GQ:DP        0|1:100:30      0|0:59:19       0|0:100:73
+3      54313475        rs6781457       T       C       .       PASS    AA=T;DP=138     GT:GQ:DP        0|1:100:30      0|0:59:19       0|0:100:91
+5      174927432       .       G       A       .       PASS    AA=G;DP=99      GT:GQ:DP        0|1:100:30      0|0:59:21       0|0:100:46
+3      9930183 rs279566        A       G       .       PASS    AA=G;DP=122     GT:GQ:DP        0|1:100:30      0|0:59:21       0|0:100:71
+17     3796626 .       A       C       .       PASS    AA=A;DP=154     GT:GQ:DP        0|1:100:30      0|0:59:24       0|0:100:49
+16     11187681        .       A       C       .       PASS    AA=C;DP=121     GT:GQ:DP        0|1:100:30      0|0:60:25       0|0:100:68
+9      90365892        .       A       G       .       PASS    AA=G;DP=126     GT:GQ:DP        0|1:100:30      0|0:60:30       0|0:100:64
+5      104454962       rs11952778      G       C       .       PASS    AA=G;DP=134     GT:GQ:DP        0|1:100:30      0|0:61:22       0|0:100:39
+2      182464311       .       G       A       .       PASS    AA=G;DP=139     GT:GQ:DP        0|1:100:30      0|0:61:27       0|0:100:41
+6      786350  .       G       A       .       PASS    AA=T;DP=151     GT:GQ:DP        0|1:100:30      0|0:62:19       0|0:100:47
+3      59195342        .       A       G       .       PASS    AA=A;DP=142     GT:GQ:DP        0|1:100:30      0|0:62:19       0|0:100:55
+2      197243637       rs6434876       T       A       .       PASS    AA=T;DP=105     GT:GQ:DP        0|1:100:30      0|0:62:19       0|0:100:56
+4      38199917        rs2637729       G       A       .       PASS    AA=g;DP=122     GT:GQ:DP        0|1:100:30      0|0:62:19       0|0:100:75
+11     102085368       .       G       A       .       PASS    AA=G;DP=125     GT:GQ:DP        0|1:100:30      0|0:62:19       0|0:100:76
+13     89847005        rs10459304      G       A       .       PASS    AA=G;DP=128     GT:GQ:DP        0|1:100:30      0|0:62:19       0|0:100:80
+16     84070865        rs16975636      A       G       .       PASS    AA=A;DP=127     GT:GQ:DP        0|1:100:30      0|0:62:19       0|0:100:81
+7      121812953       rs7811610       A       C       .       PASS    AA=C;DP=135     GT:GQ:DP        0|1:100:30      0|0:62:19       0|0:100:91
+8      41120883        .       T       A       .       PASS    AA=T;DP=142     GT:GQ:DP        0|1:100:30      0|0:62:20       0|0:100:51
+20     61884437        rs6011111       C       A       .       PASS    AA=C;DP=108     GT:GQ:DP        0|1:100:30      0|0:62:20       0|0:100:59
+1      9471853 .       G       A       .       PASS    AA=g;DP=121     GT:GQ:DP        0|1:100:30      0|0:62:20       0|0:100:65
+15     27229666        rs4779512       T       A       .       PASS    AA=T;DP=127     GT:GQ:DP        0|1:100:30      0|0:62:20       0|0:100:74
+11     121974334       .       T       C       .       PASS    AA=T;DP=127     GT:GQ:DP        0|1:100:30      0|0:62:20       0|0:100:78
+13     48349121        .       G       A       .       PASS    AA=G;DP=129     GT:GQ:DP        0|1:100:30      0|0:62:20       0|0:100:80
+15     22721349        .       G       A       .       PASS    AA=.;DP=124     GT:GQ:DP        0|1:100:30      0|0:62:21       0|0:100:76
+6      20842973        rs13217519      A       G       .       PASS    AA=G;DP=118     GT:GQ:DP        0|1:100:30      0|0:62:26       0|0:100:62
+8      120568206       .       T       A       .       PASS    AA=T;DP=137     GT:GQ:DP        0|1:100:30      0|0:62:26       0|0:100:69
+18     67817938        rs12456252      C       A       .       PASS    AA=C;DP=107     GT:GQ:DP        0|1:100:30      0|0:63:21       0|0:100:56
+1      100684741       rs617150        G       T       .       PASS    AA=G;DP=127;HM2 GT:GQ:DP        0|1:100:30      0|0:63:24       0|0:100:73
+8      76170272        rs28392181      G       A       .       PASS    AA=G;DP=127     GT:GQ:DP        0|1:100:30      0|0:63:25       0|0:100:69
+2      45827843        .       G       A       .       PASS    AA=G;DP=126     GT:GQ:DP        0|1:100:30      0|0:63:30       0|0:100:66
+20     52199011        rs6097800       G       T       .       PASS    AA=G;DP=135     GT:GQ:DP        0|1:100:30      0|0:63:32       0|0:100:77
+10     81834000        rs57257258      T       C       .       PASS    AA=t;DP=140     GT:GQ:DP        0|1:100:30      0|0:64:27       0|0:100:86
+13     94651871        rs1751027       A       G       .       PASS    AA=A;DP=133     GT:GQ:DP        0|1:100:30      0|0:65:20       0|0:100:43
+4      186445979       .       C       T       .       PASS    AA=C;DP=105     GT:GQ:DP        0|1:100:30      0|0:65:20       0|0:100:54
+3      37922091        .       C       A       .       PASS    AA=c;DP=107     GT:GQ:DP        0|1:100:30      0|0:65:20       0|0:100:58
+9      92299860        rs16906632      A       G       .       PASS    AA=G;DP=108     GT:GQ:DP        0|1:100:30      0|0:65:20       0|0:100:58
+3      541619  .       C       G       .       PASS    AA=C;DP=120     GT:GQ:DP        0|1:100:30      0|0:65:20       0|0:100:69
+6      150667265       rs6904151       T       C       .       PASS    AA=T;DP=118     GT:GQ:DP        0|1:100:30      0|0:65:20       0|0:100:71
+2      43221121        .       C       A       .       PASS    AA=C;DP=132     GT:GQ:DP        0|1:100:30      0|0:65:20       0|0:100:84
+2      85662382        rs1058588       C       T       .       PASS    AA=C;DP=137     GT:GQ:DP        0|1:100:30      0|0:65:20       0|0:100:86
+1      55946891        rs748284        A       T       .       PASS    AA=T;DP=143;HM2 GT:GQ:DP        0|1:100:30      0|0:65:20       0|0:100:89
+10     116531946       rs34253301      G       C       .       PASS    AA=G;DP=95      GT:GQ:DP        0|1:100:30      0|0:65:21       0|0:100:44
+6      31283891        rs6919603       A       G       .       PASS    AA=N;DP=177     GT:GQ:DP        0|1:100:30      0|0:65:21       0|0:100:55
+20     18852120        rs734410        G       A       .       PASS    AA=G;DP=115     GT:GQ:DP        0|1:100:30      0|0:65:21       0|0:100:62
+20     47765834        rs1034056       A       G       .       PASS    AA=A;DP=121     GT:GQ:DP        0|1:100:30      0|0:65:21       0|0:100:71
+2      120409119       rs6542553       C       G       .       PASS    AA=C;DP=130     GT:GQ:DP        0|1:100:30      0|0:65:22       0|0:100:59
+12     64262581        rs10047609      G       A       .       PASS    AA=G;DP=123     GT:GQ:DP        0|1:100:30      0|0:65:22       0|0:100:70
+13     53784473        rs9536676       G       A       .       PASS    AA=G;DP=120     GT:GQ:DP        0|1:100:30      0|0:65:23       0|0:100:68
+19     62737056        .       G       A       .       PASS    AA=G;DP=137     GT:GQ:DP        0|1:100:30      0|0:65:23       0|0:100:83
+7      43512422        rs17172218      G       A       .       PASS    AA=G;DP=94      GT:GQ:DP        0|1:100:30      0|0:66:21       0|0:100:44
+10     116989464       rs7907668       A       T       .       PASS    AA=A;DP=137     GT:GQ:DP        0|1:100:30      0|0:66:26       0|0:100:82
+10     104296498       .       A       G       .       PASS    AA=A;DP=142     GT:GQ:DP        0|1:100:30      0|0:66:26       0|0:100:89
+7      16706909        rs12112284      A       G       .       PASS    AA=A;DP=149     GT:GQ:DP        0|1:100:30      0|0:66:32       0|0:100:88
+1      205220410       rs2842715       A       G       .       PASS    AA=G;DP=136     GT:GQ:DP        0|1:100:30      0|0:67:28       0|0:100:81
+3      123326806       .       T       A       .       PASS    AA=T;DP=137     GT:GQ:DP        0|1:100:30      0|0:68:21       0|0:100:39
+5      99601696        rs9968637       C       T       .       PASS    AA=c;DP=108     GT:GQ:DP        0|1:100:30      0|0:68:21       0|0:100:58
+3      11613509        rs6804229       A       G       .       PASS    AA=A;DP=124     GT:GQ:DP        0|1:100:30      0|0:68:21       0|0:100:65
+8      116254874       .       G       C       .       PASS    AA=G;DP=121     GT:GQ:DP        0|1:100:30      0|0:68:21       0|0:100:66
+3      194018703       .       G       A       .       PASS    AA=G;DP=124     GT:GQ:DP        0|1:100:30      0|0:68:21       0|0:100:72
+14     70862453        .       G       A       .       PASS    AA=G;DP=131     GT:GQ:DP        0|1:100:30      0|0:68:21       0|0:100:81
+6      151202614       .       A       T       .       PASS    AA=A;DP=127     GT:GQ:DP        0|1:100:30      0|0:68:21       0|0:87:29
+15     37406791        .       G       T       .       PASS    AA=G;DP=139     GT:GQ:DP        0|1:100:30      0|0:68:22       0|0:100:43
+6      128612201       .       T       C       .       PASS    AA=T;DP=106     GT:GQ:DP        0|1:100:30      0|0:68:22       0|0:100:53
+13     52401782        .       G       A       .       PASS    AA=G;DP=148     GT:GQ:DP        0|1:100:30      0|0:68:22       0|0:100:56
+12     59287779        .       G       A       .       PASS    AA=G;DP=121     GT:GQ:DP        0|1:100:30      0|0:68:22       0|0:100:68
+7      156802278       rs6961411       T       C       .       PASS    AA=T;DP=129     GT:GQ:DP        0|1:100:30      0|0:68:22       0|0:100:76
+3      65087061        rs13100314      G       A       .       PASS    AA=G;DP=133     GT:GQ:DP        0|1:100:30      0|0:68:22       0|0:100:84
+1      192944922       rs12726348      T       A       .       PASS    AA=T;DP=113;HM2;HM3     GT:GQ:DP        0|1:100:30      0|0:68:23       0|0:100:60
+16     78637988        .       C       G       .       PASS    AA=C;DP=119     GT:GQ:DP        0|1:100:30      0|0:68:24       0|0:100:65
+6      77708859        rs4472308       A       G       .       PASS    AA=G;DP=148     GT:GQ:DP        0|1:100:30      0|0:68:24       0|0:100:95
+12     104213696       rs10861381      T       C       .       PASS    AA=C;DP=155     GT:GQ:DP        0|1:100:30      0|0:68:25       0|0:85:40
+9      79791866        .       G       A       .       PASS    AA=G;DP=131     GT:GQ:DP        0|1:100:30      0|0:68:27       0|0:100:75
+7      103887199       .       A       G       .       PASS    AA=A;DP=121     GT:GQ:DP        0|1:100:30      0|0:70:28       0|0:100:50
+13     38275312        rs9603431       G       A       .       PASS    AA=G;DP=136     GT:GQ:DP        0|1:100:30      0|0:70:30       0|0:100:79
+10     32356366        rs211359        A       C       .       PASS    AA=C;DP=96      GT:GQ:DP        0|1:100:30      0|0:71:22       0|0:100:34
+2      138487522       rs1378319       A       G       .       PASS    AA=A;DP=144     GT:GQ:DP        0|1:100:30      0|0:71:22       0|0:100:45
+3      178671389       .       G       A       .       PASS    AA=G;DP=138     GT:GQ:DP        0|1:100:30      0|0:71:22       0|0:100:45
+11     35564851        rs678679        C       T       .       PASS    AA=C;DP=113     GT:GQ:DP        0|1:100:30      0|0:71:22       0|0:100:51
+16     26965768        .       C       T       .       PASS    AA=N;DP=154     GT:GQ:DP        0|1:100:30      0|0:71:22       0|0:100:54
+2      177492847       rs10497472      T       C       .       PASS    AA=T;DP=109     GT:GQ:DP        0|1:100:30      0|0:71:22       0|0:100:58
+10     33919263        .       G       A       .       PASS    AA=g;DP=117     GT:GQ:DP        0|1:100:30      0|0:71:22       0|0:100:64
+9      14859179        rs7860346       A       C       .       PASS    AA=A;DP=128     GT:GQ:DP        0|1:100:30      0|0:71:22       0|0:100:64
+9      81722233        rs267570        G       C       .       PASS    AA=G;DP=122     GT:GQ:DP        0|1:100:30      0|0:71:22       0|0:100:73
+12     25998761        .       C       T       .       PASS    AA=C;DP=132     GT:GQ:DP        0|1:100:30      0|0:71:22       0|0:100:80
+20     23184347        rs2424522       G       C       .       PASS    AA=G;DP=133     GT:GQ:DP        0|1:100:30      0|0:71:22       0|0:100:83
+8      69558175        rs10105022      T       C       .       PASS    AA=A;DP=135     GT:GQ:DP        0|1:100:30      0|0:71:22       0|0:100:85
+5      167309970       rs32406 T       C       .       PASS    AA=T;DP=130     GT:GQ:DP        0|1:100:30      0|0:71:23       0|0:100:42
+3      180208121       .       T       C       .       PASS    AA=T;DP=105     GT:GQ:DP        0|1:100:30      0|0:71:23       0|0:100:52
+11     95258965        .       G       A       .       PASS    AA=G;DP=107     GT:GQ:DP        0|1:100:30      0|0:71:23       0|0:100:57
+11     11469592        .       G       C       .       PASS    AA=G;DP=114     GT:GQ:DP        0|1:100:30      0|0:71:23       0|0:100:61
+5      10766865        .       G       A       .       PASS    AA=g;DP=120     GT:GQ:DP        0|1:100:30      0|0:71:23       0|0:100:66
+9      77559684        rs1753320       C       T       .       PASS    AA=T;DP=138     GT:GQ:DP        0|1:100:30      0|0:71:23       0|0:100:79
+12     73694210        rs11834164      C       T       .       PASS    AA=C;DP=132     GT:GQ:DP        0|1:100:30      0|0:71:23       0|0:100:81
+18     57433544        rs9956167       C       T       .       PASS    AA=T;DP=101     GT:GQ:DP        0|1:100:30      0|0:71:24       0|0:100:48
+21     45958411        rs10483081      A       T       .       PASS    AA=A;DP=161     GT:GQ:DP        0|1:100:30      0|0:71:24       0|0:100:59
+3      82790964        rs13079366      G       A       .       PASS    AA=G;DP=129     GT:GQ:DP        0|1:100:30      0|0:71:24       0|0:100:67
+8      30201336        rs6468194       C       T       .       PASS    AA=T;DP=126     GT:GQ:DP        0|1:100:30      0|0:71:27       0|0:100:71
+2      71968176        rs4444557       A       T       .       PASS    AA=A;DP=138     GT:GQ:DP        0|1:100:30      0|0:72:28       0|0:100:80
+9      7294018 rs11792390      C       T       .       PASS    AA=C;DP=140     GT:GQ:DP        0|1:100:30      0|0:73:33       0|0:100:73
+15     75718921        .       G       C       .       PASS    AA=G;DP=139     GT:GQ:DP        0|1:100:30      0|0:74:23       0|0:100:44
+1      67186065        .       C       A       .       PASS    AA=C;DP=135     GT:GQ:DP        0|1:100:30      0|0:74:23       0|0:100:64
+1      102018748       .       A       G       .       PASS    AA=A;DP=127     GT:GQ:DP        0|1:100:30      0|0:74:23       0|0:100:73
+8      79958469        .       A       G       .       PASS    AA=A;DP=127     GT:GQ:DP        0|1:100:30      0|0:74:23       0|0:100:78
+18     11974242        rs57967783      C       T       .       PASS    AA=C;DP=132     GT:GQ:DP        0|1:100:30      0|0:74:23       0|0:100:80
+5      58710496        .       G       T       .       PASS    AA=G;DP=134     GT:GQ:DP        0|1:100:30      0|0:74:23       0|0:100:81
+17     11724599        rs59755492      G       A       .       PASS    AA=G;DP=140     GT:GQ:DP        0|1:100:30      0|0:74:23       0|0:100:85
+10     103660063       rs17114260      T       C       .       PASS    AA=t;DP=150     GT:GQ:DP        0|1:100:30      0|0:74:23       0|0:100:98
+6      75824505        rs9447432       C       G       .       PASS    AA=G;DP=139     GT:GQ:DP        0|1:100:30      0|0:74:24       0|0:100:35
+14     41756855        .       C       T       .       PASS    AA=C;DP=104     GT:GQ:DP        0|1:100:30      0|0:74:24       0|0:100:50
+4      178985139       rs11732838      C       T       .       PASS    AA=C;DP=129     GT:GQ:DP        0|1:100:30      0|0:74:24       0|0:100:75
+15     91713917        rs17650969      G       A       .       PASS    AA=G;DP=132     GT:GQ:DP        0|1:100:30      0|0:74:24       0|0:100:80
+4      70783291        rs10033621      C       T       .       PASS    AA=c;DP=123     GT:GQ:DP        0|1:100:30      0|0:74:25       0|0:100:69
+5      116069867       rs4512159       C       G       .       PASS    AA=C;DP=132     GT:GQ:DP        0|1:100:30      0|0:74:25       0|0:100:75
+4      83753215        .       T       C       .       PASS    AA=C;DP=131     GT:GQ:DP        0|1:100:30      0|0:74:25       0|0:100:79
+14     90904141        rs1285814       T       C       .       PASS    AA=t;DP=136     GT:GQ:DP        0|1:100:30      0|0:74:25       0|0:100:81
+7      38463152        rs55948005      A       G       .       PASS    AA=A;DP=139     GT:GQ:DP        0|1:100:30      0|0:75:35       0|0:100:73
+6      82975733        rs9344258       T       C       .       PASS    AA=T;DP=148     GT:GQ:DP        0|1:100:30      0|0:75:35       0|0:91:36
+21     39324397        .       C       T       .       PASS    AA=C;DP=114     GT:GQ:DP        0|1:100:30      0|0:77:24       0|0:100:47
+18     68215108        .       G       A       .       PASS    AA=G;DP=113     GT:GQ:DP        0|1:100:30      0|0:77:24       0|0:100:62
+21     46465754        rs13049175      G       A       .       PASS    AA=A;DP=119     GT:GQ:DP        0|1:100:30      0|0:77:24       0|0:100:65
+7      89207758        rs11970966      C       A       .       PASS    AA=C;DP=122     GT:GQ:DP        0|1:100:30      0|0:77:24       0|0:100:68
+2      151914145       .       C       G       .       PASS    AA=C;DP=122     GT:GQ:DP        0|1:100:30      0|0:77:24       0|0:100:70
+4      16796538        rs574427        G       A       .       PASS    AA=A;DP=129     GT:GQ:DP        0|1:100:30      0|0:77:24       0|0:100:75
+10     10569511        .       T       G       .       PASS    AA=T;DP=139     GT:GQ:DP        0|1:100:30      0|0:77:24       0|0:100:86
+11     126603981       rs7125229       G       A       .       PASS    AA=G;DP=142     GT:GQ:DP        0|1:100:30      0|0:77:24       0|0:100:89
+13     35673465        rs11617928      T       C       .       PASS    AA=T;DP=111     GT:GQ:DP        0|1:100:30      0|0:77:25       0|0:100:56
+9      22119132        .       C       G       .       PASS    AA=C;DP=122     GT:GQ:DP        0|1:100:30      0|0:77:26       0|0:100:62
+8      19195301        rs1399396       T       C       .       PASS    AA=T;DP=122     GT:GQ:DP        0|1:100:30      0|0:77:26       0|0:100:69
+2      183640173       .       G       A       .       PASS    AA=G;DP=132     GT:GQ:DP        0|1:100:30      0|0:77:26       0|0:100:76
+6      132503895       rs56951116      G       C       .       PASS    AA=G;DP=107     GT:GQ:DP        0|1:100:30      0|0:77:27       0|0:100:51
+2      121883060       .       G       A       .       PASS    AA=G;DP=141     GT:GQ:DP        0|1:100:30      0|0:77:28       0|0:100:74
+6      156734651       .       G       A       .       PASS    AA=G;DP=155     GT:GQ:DP        0|1:100:30      0|0:79:30       0|0:100:96
+9      8212752 .       A       G       .       PASS    AA=A;DP=148     GT:GQ:DP        0|1:100:30      0|0:79:35       0|0:100:43
+18     7923953 .       A       G       .       PASS    AA=A;DP=137     GT:GQ:DP        0|1:100:30      0|0:80:25       0|0:100:42
+9      18472783        .       A       G       .       PASS    AA=A;DP=109     GT:GQ:DP        0|1:100:30      0|0:80:25       0|0:100:54
+11     60178276        .       A       G       .       PASS    AA=A;DP=157     GT:GQ:DP        0|1:100:30      0|0:80:25       0|0:100:58
+7      122091288       .       A       G       .       PASS    AA=A;DP=113     GT:GQ:DP        0|1:100:30      0|0:80:25       0|0:100:60
+5      146785912       .       G       A       .       PASS    AA=G;DP=121     GT:GQ:DP        0|1:100:30      0|0:80:25       0|0:100:64
+8      18296349        rs7011792       G       C       .       PASS    AA=G;DP=120     GT:GQ:DP        0|1:100:30      0|0:80:25       0|0:100:66
+8      38886010        .       G       T       .       PASS    AA=.;DP=121     GT:GQ:DP        0|1:100:30      0|0:80:25       0|0:100:66
+1      146213772       .       C       T       .       PASS    AA=.;DP=124     GT:GQ:DP        0|1:100:30      0|0:80:25       0|0:100:70
+7      122861223       rs7779352       T       G       .       PASS    AA=G;DP=127     GT:GQ:DP        0|1:100:30      0|0:80:25       0|0:100:72
+10     113043012       rs7923228       T       C       .       PASS    AA=T;DP=131     GT:GQ:DP        0|1:100:30      0|0:80:25       0|0:100:75
+11     111775870       rs10789879      C       T       .       PASS    AA=c;DP=137     GT:GQ:DP        0|1:100:30      0|0:80:25       0|0:100:84
+6      163474511       .       C       A       .       PASS    AA=C;DP=139     GT:GQ:DP        0|1:100:30      0|0:80:25       0|0:100:86
+4      2733621 rs1263494       C       T       .       PASS    AA=C;DP=152     GT:GQ:DP        0|1:100:30      0|0:80:25       0|0:100:97
+14     22151766        rs11628990      C       T       .       PASS    AA=C;DP=140     GT:GQ:DP        0|1:100:30      0|0:80:25       0|0:88:41
+20     43443857        .       C       G       .       PASS    AA=c;DP=135     GT:GQ:DP        0|1:100:30      0|0:80:25       0|0:93:31
+5      82703520        .       T       G       .       PASS    AA=T;DP=139     GT:GQ:DP        0|1:100:30      0|0:80:29       0|0:100:82
+22     34603232        .       C       G       .       PASS    AA=C;DP=118     GT:GQ:DP        0|1:100:30      0|0:80:30       0|0:100:60
+7      103929871       rs41027 T       C       .       PASS    AA=T;DP=162     GT:GQ:DP        0|1:100:30      0|0:80:33       0|0:100:46
+13     65623562        rs17489853      T       C       .       PASS    AA=T;DP=115     GT:GQ:DP        0|1:100:30      0|0:83:26       0|0:100:60
+21     44290666        .       C       T       .       PASS    AA=c;DP=127     GT:GQ:DP        0|1:100:30      0|0:83:26       0|0:100:73
+5      8206916 rs336156        C       G       .       PASS    AA=c;DP=131     GT:GQ:DP        0|1:100:30      0|0:83:26       0|0:100:73
+10     8759878 rs17485998      G       A       .       PASS    AA=G;DP=132     GT:GQ:DP        0|1:100:30      0|0:83:26       0|0:100:78
+1      238645816       rs12076823      G       C       .       PASS    AA=C;DP=131;HM2 GT:GQ:DP        0|1:100:30      0|0:83:26       0|0:100:79
+1      20064288        rs11800401      C       T       .       PASS    AA=C;DP=137;HM2 GT:GQ:DP        0|1:100:30      0|0:83:26       0|0:100:80
+3      175631560       rs6799188       C       T       .       PASS    AA=C;DP=144     GT:GQ:DP        0|1:100:30      0|0:83:26       0|0:100:91
+11     1608679 rs10838014      G       C       .       PASS    AA=.;DP=150     GT:GQ:DP        0|1:100:30      0|0:83:27       0|0:100:44
+16     10086775        .       G       C       .       PASS    AA=G;DP=104     GT:GQ:DP        0|1:100:30      0|0:83:27       0|0:100:47
+3      80155268        rs7630918       A       G       .       PASS    AA=A;DP=117     GT:GQ:DP        0|1:100:30      0|0:83:27       0|0:100:63
+14     49642280        .       A       T       .       PASS    AA=A;DP=124     GT:GQ:DP        0|1:100:30      0|0:83:27       0|0:100:65
+11     119656672       rs60676831      T       C       .       PASS    AA=T;DP=134     GT:GQ:DP        0|1:100:30      0|0:83:27       0|0:100:81
+8      80904271        rs2467766       A       T       .       PASS    AA=T;DP=130     GT:GQ:DP        0|1:100:30      0|0:83:28       0|0:100:72
+2      210559948       rs16844035      A       T       .       PASS    AA=A;DP=131     GT:GQ:DP        0|1:100:30      0|0:83:28       0|0:100:75
+5      4268041 .       C       T       .       PASS    AA=C;DP=135     GT:GQ:DP        0|1:100:30      0|0:84:28       0|0:100:79
+7      20386261        rs2107130       T       C       .       PASS    AA=T;DP=123     GT:GQ:DP        0|1:100:30      0|0:84:34       0|0:100:59
+10     27323064        .       A       C       .       PASS    AA=A;DP=135     GT:GQ:DP        0|1:100:30      0|0:86:27       0|0:100:39
+5      97714269        .       A       G       .       PASS    AA=A;DP=105     GT:GQ:DP        0|1:100:30      0|0:86:27       0|0:100:48
+5      94294914        rs32911 T       C       .       PASS    AA=C;DP=132     GT:GQ:DP        0|1:100:30      0|0:86:27       0|0:100:61
+13     25732596        rs9578983       G       T       .       PASS    AA=G;DP=127     GT:GQ:DP        0|1:100:30      0|0:86:27       0|0:100:70
+6      84729584        rs9449730       G       T       .       PASS    AA=G;DP=136     GT:GQ:DP        0|1:100:30      0|0:86:27       0|0:100:75
+2      126994414       rs34051935      C       G       .       PASS    AA=G;DP=151     GT:GQ:DP        0|1:100:30      0|0:86:28       0|0:100:43
+9      100362487       rs2778901       C       T       .       PASS    AA=C;DP=111     GT:GQ:DP        0|1:100:30      0|0:86:28       0|0:100:54
+7      50984952        rs62449506      C       T       .       PASS    AA=C;DP=119     GT:GQ:DP        0|1:100:30      0|0:86:28       0|0:100:62
+2      220432527       .       G       A       .       PASS    AA=G;DP=135     GT:GQ:DP        0|1:100:30      0|0:86:28       0|0:100:80
+11     96359830        .       T       C       .       PASS    AA=C;DP=123     GT:GQ:DP        0|1:100:30      0|0:86:29       0|0:100:67
+16     63774394        rs7196714       A       G       .       PASS    AA=A;DP=126     GT:GQ:DP        0|1:100:30      0|0:86:29       0|0:100:68
+2      60383760        rs12618288      C       T       .       PASS    AA=C;DP=136     GT:GQ:DP        0|1:100:30      0|0:86:29       0|0:100:77
+12     8180530 .       G       A       .       PASS    AA=.;DP=143     GT:GQ:DP        0|1:100:30      0|0:86:29       0|0:100:84
+16     81924912        rs13333697      C       T       .       PASS    AA=T;DP=157     GT:GQ:DP        0|1:100:30      0|0:87:38       0|0:100:91
+6      50513451        rs56276517      T       C       .       PASS    AA=T;DP=125     GT:GQ:DP        0|1:100:30      0|0:89:28       0|0:100:68
+5      118325556       .       C       T       .       PASS    AA=c;DP=133     GT:GQ:DP        0|1:100:30      0|0:89:28       0|0:100:75
+9      20633529        .       C       T       .       PASS    AA=C;DP=148     GT:GQ:DP        0|1:100:30      0|0:89:28       0|0:100:89
+10     49590313        rs17011115      C       T       .       PASS    AA=C;DP=145     GT:GQ:DP        0|1:100:30      0|0:89:30       0|0:100:40
+14     37945523        rs7159351       C       A       .       PASS    AA=A;DP=130     GT:GQ:DP        0|1:100:30      0|0:92:29       0|0:100:71
+4      182025936       rs35718347      G       A       .       PASS    AA=G;DP=139     GT:GQ:DP        0|1:100:30      0|0:92:29       0|0:100:78
+21     39950607        .       G       A       .       PASS    AA=C;DP=140     GT:GQ:DP        0|1:100:30      0|0:92:29       0|0:100:81
+15     69685259        rs12441623      A       T       .       PASS    AA=A;DP=146     GT:GQ:DP        0|1:100:30      0|0:92:30       0|0:100:49
+19     43716330        .       A       G       .       PASS    AA=A;DP=147     GT:GQ:DP        0|1:100:30      0|0:95:30       0|0:100:45
+5      5161554 rs10042128      C       A       .       PASS    AA=C;DP=136     GT:GQ:DP        0|1:100:30      0|0:95:30       0|0:100:81
+2      194140035       rs13392257      C       T       .       PASS    AA=C;DP=117     GT:GQ:DP        0|1:100:30      0|0:95:31       0|0:100:59
+6      83344417        .       G       C       .       PASS    AA=C;DP=129     GT:GQ:DP        0|1:100:30      0|0:95:31       0|0:100:64
+1      239882849       .       C       T       .       PASS    AA=C;DP=157     GT:GQ:DP        0|1:100:30      0|0:95:32       0|0:100:55
+10     27183172        .       G       A       .       PASS    AA=G;DP=144     GT:GQ:DP        0|1:100:30      0|0:98:31       0|0:100:43
+8      131661664       .       T       C       .       PASS    AA=C;DP=110     GT:GQ:DP        0|1:100:30      0|0:98:31       0|0:100:46
+13     96620535        rs7331281       T       C       .       PASS    AA=C;DP=113     GT:GQ:DP        0|1:100:30      0|0:98:31       0|0:100:52
+5      150935145       .       A       G       .       PASS    AA=A;DP=138     GT:GQ:DP        0|1:100:30      0|0:98:31       0|0:100:80
+8      87269451        .       C       T       .       PASS    AA=C;DP=135     GT:GQ:DP        0|1:100:30      0|0:98:32       0|0:100:74
+2      158565017       rs6437125       T       A       .       PASS    AA=A;DP=120     GT:GQ:DP        0|1:100:30      0|1:100:11      0|0:100:36
+7      84925041        rs1528499       G       T       .       PASS    AA=T;DP=89      GT:GQ:DP        0|1:100:30      0|1:100:18      0|0:100:42
+12     129834537       rs2632599       A       G       .       PASS    AA=G;DP=132     GT:GQ:DP        0|1:100:30      0|1:100:18      0|0:100:86
+17     69025782        rs1483648       A       C       .       PASS    AA=A;DP=93      GT:GQ:DP        0|1:100:30      0|1:100:18      0|0:77:34
+4      123220084       rs13134630      T       C       .       PASS    AA=T;DP=104     GT:GQ:DP        0|1:100:30      0|1:100:19      0|0:100:57
+12     65943748        rs710628        A       C       .       PASS    AA=C;DP=115     GT:GQ:DP        0|1:100:30      0|1:100:19      0|0:84:29
+14     65270430        .       G       A       .       PASS    AA=G;DP=131     GT:GQ:DP        0|1:100:30      0|1:100:19      0|0:99:34
+10     53431214        rs2454541       C       A       .       PASS    AA=A;DP=92      GT:GQ:DP        0|1:100:30      0|1:100:20      0|0:100:41
+2      228441554       .       G       C       .       PASS    AA=-;DP=105     GT:GQ:DP        0|1:100:30      0|1:100:21      0|0:100:55
+10     106767071       rs7920108       G       A       .       PASS    AA=G;DP=120     GT:GQ:DP        0|1:100:30      0|1:100:21      0|0:100:67
+8      30725372        rs2978289       T       A       .       PASS    AA=A;DP=79      GT:GQ:DP        0|1:100:30      0|1:100:21      0|0:54:19
+3      60557770        rs2856022       A       C       .       PASS    AA=A;DP=112     GT:GQ:DP        0|1:100:30      0|1:100:23      0|0:100:60
+7      136627253       rs10248429      C       T       .       PASS    AA=C;DP=125     GT:GQ:DP        0|1:100:30      0|1:100:23      0|0:100:76
+7      139430730       rs59618522      T       C       .       PASS    AA=T;DP=156     GT:GQ:DP        0|1:100:30      0|1:100:24      0|0:100:103
+1      231393390       .       C       T       .       PASS    AA=C;DP=143     GT:GQ:DP        0|1:100:30      0|1:100:24      0|0:100:38
+6      18605671        rs4716272       G       C       .       PASS    AA=G;DP=115     GT:GQ:DP        0|1:100:30      0|1:100:24      0|0:100:63
+9      71091477        rs6559427       G       A       .       PASS    AA=A;DP=122     GT:GQ:DP        0|1:100:30      0|1:100:24      0|0:100:70
+17     64801099        rs477045        C       T       .       PASS    AA=T;DP=133     GT:GQ:DP        0|1:100:30      0|1:100:24      0|0:100:79
+2      49019679        rs7569392       G       A       .       PASS    AA=G;DP=144     GT:GQ:DP        0|1:100:30      0|1:100:24      0|0:100:92
+1      192815442       rs10921612      T       G       .       PASS    AA=T;DP=113;HM2;HM3     GT:GQ:DP        0|1:100:30      0|1:100:25      0|0:100:57
+1      110235600       rs333954        A       G       .       PASS    AA=G;DP=170;HM2 GT:GQ:DP        0|1:100:30      0|1:100:25      0|0:100:65
+2      33155620        rs543690        T       C       .       PASS    AA=T;DP=156     GT:GQ:DP        0|1:100:30      0|1:100:26      0|0:100:46
+17     75443333        .       G       A       .       PASS    AA=G;DP=133     GT:GQ:DP        0|1:100:30      0|1:100:26      0|0:100:78
+11     46410312        .       A       G       .       PASS    AA=A;DP=157     GT:GQ:DP        0|1:100:30      0|1:100:27      0|0:100:60
+15     86552826        .       A       C       .       PASS    AA=A;DP=139     GT:GQ:DP        0|1:100:30      0|1:100:27      0|0:100:83
+10     132310153       rs1176491       A       C       .       PASS    AA=C;DP=146     GT:GQ:DP        0|1:100:30      0|1:100:27      0|0:100:88
+4      135086930       .       C       T       .       PASS    AA=C;DP=153     GT:GQ:DP        0|1:100:30      0|1:100:28      0|0:100:48
+8      21225017        rs2898522       T       A       .       PASS    AA=T;DP=127     GT:GQ:DP        0|1:100:30      0|1:100:28      0|0:100:69
+12     41748456        rs1167110       T       A       .       PASS    AA=T;DP=146     GT:GQ:DP        0|1:100:30      0|1:100:28      0|0:100:90
+10     6684680 rs12248647      A       G       .       PASS    AA=A;DP=129     GT:GQ:DP        0|1:100:30      0|1:100:29      0|0:100:71
+16     75907584        rs9746086       A       T       .       PASS    AA=T;DP=130     GT:GQ:DP        0|1:100:30      0|1:100:29      0|0:100:76
+3      125344738       .       C       T       .       PASS    AA=C;DP=109     GT:GQ:DP        0|1:100:30      0|1:100:30      0|0:100:48
+9      1780902 rs62537238      C       T       .       PASS    AA=C;DP=122     GT:GQ:DP        0|1:100:30      0|1:100:30      0|0:100:64
+2      156905829       rs707130        T       C       .       PASS    AA=C;DP=129     GT:GQ:DP        0|1:100:30      0|1:100:30      0|0:100:68
+11     128880755       rs57770100      T       C       .       PASS    AA=T;DP=117     GT:GQ:DP        0|1:100:30      0|1:100:35      0|0:100:51
+11     30181746        rs1716021       G       C       .       PASS    AA=C;DP=157     GT:GQ:DP        0|1:100:30      0|1:100:36      0|0:100:91
+2      107417815       rs266176        G       A       .       PASS    AA=G;DP=140     GT:GQ:DP        0|1:100:30      0|1:100:40      0|0:100:70
+1      165049062       rs2064067       C       T       .       PASS    AA=C;DP=132;HM2;HM3     GT:GQ:DP        0|1:100:30      0|1:100:42      0|0:100:60
+4      176657928       rs7680911       A       G       .       PASS    AA=G;DP=126     GT:GQ:DP        0|1:100:30      0|1:12:14       0|0:100:82
+4      86400115        rs7689227       C       T       .       PASS    AA=T;DP=124     GT:GQ:DP        0|1:100:30      0|1:14:17       0|0:76:35
+10     133779026       rs7086006       G       A       .       PASS    AA=A;DP=122     GT:GQ:DP        0|1:100:30      0|1:20:15       0|0:100:76
+12     27671869        rs7963411       G       C       .       PASS    AA=C;DP=113     GT:GQ:DP        0|1:100:30      0|1:23:20       0|0:100:64
+7      107695263       rs1155  A       T       .       PASS    AA=A;DP=85      GT:GQ:DP        0|1:100:30      0|1:32:15       0|0:100:40
+22     45226685        rs6008835       C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        0|1:100:30      0|1:37:11       0|0:100:74
+13     100585254       rs592888        A       G       .       PASS    AA=A;DP=103     GT:GQ:DP        0|1:100:30      0|1:43:14       0|0:100:65
+22     47495382        rs132247        C       T       .       PASS    AA=C;DP=123     GT:GQ:DP        0|1:100:30      0|1:46:9        0|0:100:86
+13     97718394        rs9584790       T       C       .       PASS    AA=C;DP=128     GT:GQ:DP        0|1:100:30      0|1:49:22       0|0:100:78
+16     6612412 rs11647913      A       G       .       PASS    AA=A;DP=138     GT:GQ:DP        0|1:100:30      0|1:53:34       0|0:100:72
+1      2790214 rs61763695      G       T       .       PASS    AA=G;DP=86      GT:GQ:DP        0|1:100:30      0|1:56:15       0|0:77:37
+1      76234594        rs17097836      T       A       .       PASS    AA=A;DP=113     GT:GQ:DP        0|1:100:30      0|1:57:21       0|0:100:66
+16     10858769        rs12443894      T       C       .       PASS    AA=C;DP=130     GT:GQ:DP        0|1:100:30      0|1:61:24       0|0:100:76
+2      10245780        rs741263        G       A       .       PASS    AA=A;DP=108     GT:GQ:DP        0|1:100:30      0|1:66:18       0|0:100:54
+6      22633569        rs9393308       G       A       .       PASS    AA=G;DP=122     GT:GQ:DP        0|1:100:30      0|1:66:26       0|0:100:66
+5      132922330       rs9327655       C       T       .       PASS    AA=c;DP=138     GT:GQ:DP        0|1:100:30      0|1:69:25       0|0:100:82
+3      37764197        .       C       T       .       PASS    AA=C;DP=134     GT:GQ:DP        0|1:100:30      0|1:71:27       0|0:100:71
+7      134512580       .       A       G       .       PASS    AA=A;DP=152     GT:GQ:DP        0|1:100:30      0|1:71:34       0|0:100:92
+5      86444685        .       G       A       .       PASS    AA=G;DP=117     GT:GQ:DP        0|1:100:30      0|1:72:20       0|0:100:69
+6      155523316       rs9322501       T       C       .       PASS    AA=t;DP=126     GT:GQ:DP        0|1:100:30      0|1:77:26       0|0:100:73
+22     45444114        rs2430745       T       C       .       PASS    AA=C;DP=131     GT:GQ:DP        0|1:100:30      0|1:82:10       0|0:100:49
+19     4762575 .       C       G       .       PASS    AA=G;DP=121     GT:GQ:DP        0|1:100:30      0|1:86:13       0|0:100:81
+7      95875507        rs12155455      C       T       .       PASS    AA=T;DP=130     GT:GQ:DP        0|1:100:30      0|1:86:17       0|0:100:86
+3      85902102        rs2325036       A       C       .       PASS    AA=A;DP=106     GT:GQ:DP        0|1:100:30      0|1:86:20       0|0:100:55
+6      65596585        rs9453078       C       T       .       PASS    AA=C;DP=147     GT:GQ:DP        0|1:100:30      0|1:90:19       0|0:100:97
+1      179995622       rs4652679       G       A       .       PASS    AA=G;DP=136;HM2;HM3     GT:GQ:DP        0|1:100:30      0|1:90:23       0|0:100:85
+7      83830985        rs620892        C       T       .       PASS    AA=T;DP=113     GT:GQ:DP        0|1:100:30      0|1:91:22       0|0:100:56
+6      25085868        rs7747678       G       A       .       PASS    AA=G;DP=119     GT:GQ:DP        0|1:100:30      0|1:92:21       0|0:100:50
+4      130771476       rs11945175      T       C       .       PASS    AA=t;DP=109     GT:GQ:DP        0|1:100:30      0|1:95:20       0|0:100:58
+2      110262508       rs3789732       C       A       .       PASS    AA=a;DP=119     GT:GQ:DP        0|1:100:30      0|1:95:27       0|0:100:52
+12     114605421       rs2384672       C       A       .       PASS    AA=A;DP=132     GT:GQ:DP        0|1:100:30      0|1:95:31       0|0:100:70
+15     54109807        rs7168072       T       A       .       PASS    AA=T;DP=136     GT:GQ:DP        0|1:100:30      0|1:98:21       0|0:100:43
+18     72475267        rs11874188      T       G       .       PASS    AA=t;DP=143     GT:GQ:DP        0|1:100:30      0|1:98:25       0|0:100:88
+11     25298551        rs7123321       T       G       .       PASS    AA=G;DP=126     GT:GQ:DP        0|1:100:30      0|1:98:28       0|0:100:67
+9      38458447        rs1891921       C       T       .       PASS    AA=N;DP=110     GT:GQ:DP        0|1:100:30      1|1:12:13       0|1:100:65
+19     5306437 rs892136        T       C       .       PASS    AA=C;DP=92      GT:GQ:DP        0|1:100:30      1|1:18:7        0|1:100:57
+12     102807006       rs9943762       G       A       .       PASS    AA=G;DP=156     GT:GQ:DP        0|1:100:30      1|1:26:16       0|1:100:68
+17     13392554        rs10521226      T       C       .       PASS    AA=C;DP=145     GT:GQ:DP        0|1:100:30      1|1:27:21       0|1:100:41
+21     43384363        rs1672118       G       C       .       PASS    AA=N;DP=119     GT:GQ:DP        0|1:100:30      1|1:27:21       0|1:100:69
+16     83806458        rs34890045      A       G       .       PASS    AA=A;DP=122     GT:GQ:DP        0|1:100:30      1|1:27:21       0|1:100:73
+15     92433451        rs28485756      T       C       .       PASS    AA=C;DP=131     GT:GQ:DP        0|1:100:30      1|1:27:21       0|1:100:79
+7      127739588       rs4728102       T       C       .       PASS    AA=C;DP=96      GT:GQ:DP        0|1:100:30      1|1:27:25       0|1:100:32
+8      90447169        rs1993967       A       G       .       PASS    AA=G;DP=105     GT:GQ:DP        0|1:100:30      1|1:28:16       0|1:100:59
+1      224810762       rs588782        T       C       .       PASS    AA=C;DP=98      GT:GQ:DP        0|1:100:30      1|1:29:16       0|1:100:38
+12     98260161        rs55776753      A       C       .       PASS    AA=A;DP=125     GT:GQ:DP        0|1:100:30      1|1:31:17       0|1:100:75
+5      22644996        rs4409052       C       G       .       PASS    AA=G;DP=105     GT:GQ:DP        0|1:100:30      1|1:32:18       0|1:100:60
+1      79179424        rs1489394       T       G       .       PASS    AA=G;DP=130;HM2 GT:GQ:DP        0|1:100:30      1|1:33:23       0|1:100:77
+5      9229271 rs40717 A       C       .       PASS    AA=C;DP=117     GT:GQ:DP        0|1:100:30      1|1:35:26       0|1:100:60
+22     47482320        rs130128        G       C       .       PASS    AA=C;DP=101     GT:GQ:DP        0|1:100:30      1|1:36:13       0|1:100:59
+10     27956159        rs11015918      T       A       .       PASS    AA=T;DP=99      GT:GQ:DP        0|1:100:30      1|1:36:14       0|1:100:55
+15     56258083        rs3858889       T       C       .       PASS    AA=C;DP=108     GT:GQ:DP        0|1:100:30      1|1:38:20       0|1:100:52
+2      29291013        rs2924371       C       T       .       PASS    AA=T;DP=137     GT:GQ:DP        0|1:100:30      1|1:39:14       0|1:100:49
+14     63605485        rs1255968       T       G       .       PASS    AA=G;DP=115     GT:GQ:DP        0|1:100:30      1|1:39:14       0|1:100:71
+20     55644921        rs6128110       T       C       .       PASS    AA=C;DP=107     GT:GQ:DP        0|1:100:30      1|1:39:15       0|1:100:64
+12     114068183       rs35423 G       A       .       PASS    AA=A;DP=105     GT:GQ:DP        0|1:100:30      1|1:39:16       0|1:100:61
+4      80241712        rs34421130      A       G       .       PASS    AA=A;DP=102     GT:GQ:DP        0|1:100:30      1|1:41:20       0|1:100:52
+15     38565798        rs2444302       A       G       .       PASS    AA=T;DP=97      GT:GQ:DP        0|1:100:30      1|1:42:15       0|1:100:49
+1      14768752        rs12759227      A       C       .       PASS    AA=N;DP=114     GT:GQ:DP        0|1:100:30      1|1:42:15       0|1:100:70
+17     14438582        rs7207269       A       G       .       PASS    AA=G;DP=133     GT:GQ:DP        0|1:100:30      1|1:43:21       0|1:100:83
+6      64752579        rs1482456       T       C       .       PASS    AA=T;DP=120     GT:GQ:DP        0|1:100:30      1|1:44:21       0|1:100:70
+2      224194284       rs6436416       C       T       .       PASS    AA=c;DP=104     GT:GQ:DP        0|1:100:30      1|1:45:17       0|1:100:58
+1      63069349        rs10889383      C       T       .       PASS    AA=T;DP=128;HM2;HM3     GT:GQ:DP        0|1:100:30      1|1:45:18       0|1:100:76
+1      151538148       rs821431        C       T       .       PASS    AA=C;DP=104;HM2;HM3     GT:GQ:DP        0|1:100:30      1|1:48:17       0|1:100:58
+8      83474083        rs7002410       G       A       .       PASS    AA=G;DP=110     GT:GQ:DP        0|1:100:30      1|1:48:17       0|1:100:66
+5      85762606        rs62374919      T       A       .       PASS    AA=T;DP=117     GT:GQ:DP        0|1:100:30      1|1:48:18       0|1:100:69
+20     40494284        rs6016792       C       G       .       PASS    AA=G;DP=121     GT:GQ:DP        0|1:100:30      1|1:48:18       0|1:100:72
+2      156206190       rs1357819       G       A       .       PASS    AA=g;DP=107     GT:GQ:DP        0|1:100:30      1|1:51:18       0|1:100:59
+16     5518989 rs11646889      T       C       .       PASS    AA=T;DP=136     GT:GQ:DP        0|1:100:30      1|1:51:19       0|1:100:87
+1      18037987        rs688657        G       A       .       PASS    AA=A;DP=139     GT:GQ:DP        0|1:100:30      1|1:54:19       0|1:100:77
+6      55496245        rs7744986       A       G       .       PASS    AA=A;DP=118     GT:GQ:DP        0|1:100:30      1|1:54:20       0|1:100:71
+22     33470640        rs137237        G       C       .       PASS    AA=G;DP=127     GT:GQ:DP        0|1:100:30      1|1:57:20       0|1:100:75
+20     2107791 rs4815018       A       G       .       PASS    AA=a;DP=130     GT:GQ:DP        0|1:100:30      1|1:57:20       0|1:100:81
+18     58936935        rs2472574       C       A       .       PASS    AA=A;DP=130     GT:GQ:DP        0|1:100:30      1|1:57:20       0|1:100:82
+10     475367  rs61837200      C       A       .       PASS    AA=A;DP=151     GT:GQ:DP        0|1:100:30      1|1:57:21       0|1:100:53
+12     76519639        rs771839        C       T       .       PASS    AA=C;DP=118     GT:GQ:DP        0|1:100:30      1|1:57:21       0|1:100:68
+10     97383630        rs1890186       G       C       .       PASS    AA=N;DP=104     GT:GQ:DP        0|1:100:30      1|1:60:21       0|1:100:53
+11     62740012        rs1193643       T       C       .       PASS    AA=t;DP=115     GT:GQ:DP        0|1:100:30      1|1:60:21       0|1:100:66
+15     92087899        rs4635292       C       A       .       PASS    AA=C;DP=117     GT:GQ:DP        0|1:100:30      1|1:60:21       0|1:100:71
+15     85516565        rs10775242      G       A       .       PASS    AA=G;DP=126     GT:GQ:DP        0|1:100:30      1|1:60:21       0|1:100:73
+11     5164196 rs6578567       G       C       .       PASS    AA=g;DP=87      GT:GQ:DP        0|1:100:30      1|1:60:22       0|1:100:31
+14     58653480        rs10134868      T       C       .       PASS    AA=C;DP=114     GT:GQ:DP        0|1:100:30      1|1:60:22       0|1:100:61
+4      94408394        rs13142060      G       A       .       PASS    AA=G;DP=134     GT:GQ:DP        0|1:100:30      1|1:60:23       0|1:100:82
+9      7315964 rs1926390       T       G       .       PASS    AA=G;DP=110     GT:GQ:DP        0|1:100:30      1|1:63:22       0|1:100:61
+2      207372935       .       A       G       .       PASS    AA=A;DP=114     GT:GQ:DP        0|1:100:30      1|1:63:22       0|1:100:62
+14     21419073        rs2293718       T       C       .       PASS    AA=C;DP=123     GT:GQ:DP        0|1:100:30      1|1:63:22       0|1:100:71
+14     20365655        rs1885320       G       A       .       PASS    AA=A;DP=122     GT:GQ:DP        0|1:100:30      1|1:63:23       0|1:100:66
+1      67967099        rs3766263       C       T       .       PASS    AA=T;DP=121;HM2;HM3     GT:GQ:DP        0|1:100:30      1|1:63:23       0|1:100:69
+11     90499740        rs7129547       T       C       .       PASS    AA=T;DP=119     GT:GQ:DP        0|1:100:30      1|1:63:24       0|1:100:60
+2      195736074       rs1397746       C       A       .       PASS    AA=C;DP=116     GT:GQ:DP        0|1:100:30      1|1:66:23       0|1:100:62
+8      90640844        rs7000185       G       A       .       PASS    AA=G;DP=127     GT:GQ:DP        0|1:100:30      1|1:66:23       0|1:100:75
+2      187397323       rs4429438       C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        0|1:100:30      1|1:66:24       0|1:100:66
+7      29234455        rs245943        G       C       .       PASS    AA=C;DP=127     GT:GQ:DP        0|1:100:30      1|1:66:24       0|1:100:74
+3      22476083        rs1349332       A       C       .       PASS    AA=A;DP=120     GT:GQ:DP        0|1:100:30      1|1:69:24       0|1:100:64
+14     48881683        rs2816747       C       T       .       PASS    AA=c;DP=133     GT:GQ:DP        0|1:100:30      1|1:69:29       0|1:100:76
+11     87604614        rs6483042       G       A       .       PASS    AA=A;DP=120     GT:GQ:DP        0|1:100:30      1|1:72:25       0|1:100:69
+21     36730641        rs12710437      G       C       .       PASS    AA=G;DP=131     GT:GQ:DP        0|1:100:30      1|1:72:25       0|1:100:76
+3      28127501        rs1873838       A       G       .       PASS    AA=G;DP=128     GT:GQ:DP        0|1:100:30      1|1:72:26       0|1:100:70
+4      99760191        rs11097625      T       C       .       PASS    AA=C;DP=168     GT:GQ:DP        0|1:100:30      1|1:72:32       0|1:100:60
+3      179914589       rs12489626      C       T       .       PASS    AA=T;DP=127     GT:GQ:DP        0|1:100:30      1|1:75:26       0|1:100:71
+4      133857914       rs62311752      A       C       .       PASS    AA=A;DP=114     GT:GQ:DP        0|1:100:30      1|1:78:27       0|1:100:58
+4      172170216       rs11132866      A       G       .       PASS    AA=A;DP=163     GT:GQ:DP        0|1:100:30      1|1:78:30       0|1:100:45
+11     131125826       rs12790959      C       T       .       PASS    AA=T;DP=143     GT:GQ:DP        0|1:100:30      1|1:81:28       0|1:100:46
+4      134852350       rs1027825       T       C       .       PASS    AA=T;DP=110     GT:GQ:DP        0|1:100:30      1|1:81:29       0|1:100:49
+2      782464  rs7590548       T       C       .       PASS    AA=C;DP=119     GT:GQ:DP        0|1:100:30      1|1:81:29       0|1:100:61
+1      96992945        rs6666522       C       T       .       PASS    AA=C;DP=119;HM2 GT:GQ:DP        0|1:100:30      1|1:84:29       0|1:100:60
+13     105138557       rs7490643       T       C       .       PASS    AA=t;DP=119     GT:GQ:DP        0|1:100:30      1|1:87:31       0|1:100:58
+10     23062599        rs7092404       T       A       .       PASS    AA=T;DP=126     GT:GQ:DP        0|1:100:30      1|1:90:31       0|1:100:52
+10     130309727       rs4750983       A       C       .       PASS    AA=A;DP=143     GT:GQ:DP        0|1:100:30      1|1:90:32       0|1:100:82
+2      200765736       rs7565417       G       A       .       PASS    AA=G;DP=134     GT:GQ:DP        0|1:100:30      1|1:93:34       0|1:100:70
+3      116052138       rs648806        A       G       .       PASS    AA=G;DP=133     GT:GQ:DP        0|1:100:30      1|1:99:35       0|1:100:68
+4      159808426       rs11544037      A       C       .       PASS    AA=A;DP=136     GT:GQ:DP        0|1:100:31      0|0:100:32      0|0:100:69
+14     93076510        rs17129095      T       G       .       PASS    AA=T;DP=163     GT:GQ:DP        0|1:100:31      0|0:100:32      0|0:100:82
+1      244407274       rs3904856       T       C       .       PASS    AA=C;DP=126;HM2 GT:GQ:DP        0|1:100:31      0|0:100:33      0|0:100:63
+21     19962822        .       A       G       .       PASS    AA=A;DP=129     GT:GQ:DP        0|1:100:31      0|0:100:33      0|0:100:70
+4      155103882       .       G       A       .       PASS    AA=G;DP=144     GT:GQ:DP        0|1:100:31      0|0:100:33      0|0:100:83
+18     34291622        .       G       A       .       PASS    AA=G;DP=122     GT:GQ:DP        0|1:100:31      0|0:100:34      0|0:100:56
+13     68041706        .       T       G       .       PASS    AA=T;DP=131     GT:GQ:DP        0|1:100:31      0|0:100:35      0|0:100:64
+1      156220162       rs11264870      A       T       .       PASS    AA=A;DP=158;HM2 GT:GQ:DP        0|1:100:31      0|0:100:36      0|0:100:51
+12     56951358        rs10877085      G       A       .       PASS    AA=G;DP=150     GT:GQ:DP        0|1:100:31      0|0:100:37      0|0:100:39
+12     27889665        .       G       A       .       PASS    AA=G;DP=139     GT:GQ:DP        0|1:100:31      0|0:100:37      0|0:100:72
+13     69188931        rs1834123       T       C       .       PASS    AA=T;DP=143     GT:GQ:DP        0|1:100:31      0|0:100:37      0|0:100:73
+18     72020648        rs7242910       G       T       .       PASS    AA=G;DP=159     GT:GQ:DP        0|1:100:31      0|0:100:37      0|0:100:91
+2      143445062       rs970171        C       T       .       PASS    AA=C;DP=135     GT:GQ:DP        0|1:100:31      0|0:100:38      0|0:100:66
+6      134011294       .       T       G       .       PASS    AA=T;DP=169     GT:GQ:DP        0|1:100:31      0|0:100:39      0|0:100:57
+1      237379306       .       A       C       .       PASS    AA=A;DP=150     GT:GQ:DP        0|1:100:31      0|0:100:52      0|0:100:68
+3      127335317       rs2069032       G       A       .       PASS    AA=G;DP=90      GT:GQ:DP        0|1:100:31      0|0:14:13       0|0:100:42
+4      189489297       rs11737604      C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        0|1:100:31      0|0:16:12       0|0:26:30
+6      25558083        rs10214744      G       T       .       PASS    AA=G;DP=162     GT:GQ:DP        0|1:100:31      0|0:17:27       0|0:100:51
+1      223372847       rs55866053      A       T       .       PASS    AA=T;DP=120     GT:GQ:DP        0|1:100:31      0|0:21:16       0|0:100:74
+16     2944303 .       C       T       .       PASS    AA=C;DP=118     GT:GQ:DP        0|1:100:31      0|0:25:17       0|0:100:70
+14     103912530       rs57468036      G       A       .       PASS    AA=G;DP=108     GT:GQ:DP        0|1:100:31      0|0:29:8        0|0:100:67
+17     73861469        .       G       A       .       PASS    AA=G;DP=126     GT:GQ:DP        0|1:100:31      0|0:30:17       0|0:100:78
+16     88195915        rs12935102      C       T       .       PASS    AA=C;DP=96      GT:GQ:DP        0|1:100:31      0|0:32:10       0|0:100:46
+7      71090320        rs844695        T       C       .       PASS    AA=C;DP=102     GT:GQ:DP        0|1:100:31      0|0:35:10       0|0:100:59
+14     92538373        .       G       A       .       PASS    AA=G;DP=103     GT:GQ:DP        0|1:100:31      0|0:35:10       0|0:100:62
+11     34913849        rs7945013       C       T       .       PASS    AA=C;DP=98      GT:GQ:DP        0|1:100:31      0|0:35:11       0|0:100:54
+16     79414997        rs7197605       G       A       .       PASS    AA=G;DP=85      GT:GQ:DP        0|1:100:31      0|0:35:11       0|0:58:30
+3      144443576       rs7629516       C       T       .       PASS    AA=C;DP=102     GT:GQ:DP        0|1:100:31      0|0:35:12       0|0:100:48
+1      25980563        .       A       G       .       PASS    AA=A;DP=104     GT:GQ:DP        0|1:100:31      0|0:35:13       0|0:100:60
+14     93667114        .       T       A       .       PASS    AA=T;DP=97      GT:GQ:DP        0|1:100:31      0|0:35:21       0|0:100:44
+8      140353536       rs12334987      T       C       .       PASS    AA=C;DP=141     GT:GQ:DP        0|1:100:31      0|0:35:21       0|0:100:92
+1      37981702        .       T       C       .       PASS    AA=T;DP=102     GT:GQ:DP        0|1:100:31      0|0:38:11       0|0:100:46
+12     123385923       .       G       A       .       PASS    AA=G;DP=127     GT:GQ:DP        0|1:100:31      0|0:38:12       0|0:100:84
+3      55543008        .       G       A       .       PASS    AA=G;DP=126     GT:GQ:DP        0|1:100:31      0|0:40:17       0|0:100:78
+1      166575870       .       G       T       .       PASS    AA=G;DP=152     GT:GQ:DP        0|1:100:31      0|0:40:25       0|0:100:95
+2      30783265        .       G       A       .       PASS    AA=G;DP=97      GT:GQ:DP        0|1:100:31      0|0:41:12       0|0:100:44
+16     66037730        rs13332041      C       T       .       PASS    AA=C;DP=108     GT:GQ:DP        0|1:100:31      0|0:41:12       0|0:100:56
+7      39333471        rs4723859       G       A       .       PASS    AA=A;DP=112     GT:GQ:DP        0|1:100:31      0|0:41:12       0|0:100:67
+9      111133777       .       C       G       .       PASS    AA=C;DP=107     GT:GQ:DP        0|1:100:31      0|0:41:12       0|0:100:69
+3      81405414        .       A       G       .       PASS    AA=A;DP=86      GT:GQ:DP        0|1:100:31      0|0:41:13       0|0:100:43
+20     38573729        .       C       A       .       PASS    AA=C;DP=104     GT:GQ:DP        0|1:100:31      0|0:41:14       0|0:100:47
+12     7757201 .       G       A       .       PASS    AA=G;DP=133     GT:GQ:DP        0|1:100:31      0|0:41:18       0|0:73:42
+20     46054267        .       A       G       .       PASS    AA=A;DP=129     GT:GQ:DP        0|1:100:31      0|0:41:19       0|0:100:80
+10     6769082 rs7095873       T       C       .       PASS    AA=.;DP=127     GT:GQ:DP        0|1:100:31      0|0:41:23       0|0:100:71
+2      133762073       rs1344725       G       T       .       PASS    AA=G;DP=101     GT:GQ:DP        0|1:100:31      0|0:41:24       0|0:100:36
+4      102279555       rs34505183      C       T       .       PASS    AA=C;DP=108     GT:GQ:DP        0|1:100:31      0|0:43:24       0|0:100:54
+4      30137942        .       T       C       .       PASS    AA=C;DP=100     GT:GQ:DP        0|1:100:31      0|0:44:13       0|0:100:57
+8      33276515        rs6468162       G       A       .       PASS    AA=G;DP=117     GT:GQ:DP        0|1:100:31      0|0:44:13       0|0:100:73
+1      95388901        .       A       G       .       PASS    AA=A;DP=79      GT:GQ:DP        0|1:100:31      0|0:44:13       0|0:75:25
+6      101722815       .       C       T       .       PASS    AA=C;DP=127     GT:GQ:DP        0|1:100:31      0|0:44:14       0|0:100:82
+1      91188135        rs1744543       C       T       .       PASS    AA=T;DP=91      GT:GQ:DP        0|1:100:31      0|0:44:15       0|0:100:37
+17     49152103        rs8077400       C       A       .       PASS    AA=C;DP=118     GT:GQ:DP        0|1:100:31      0|0:45:28       0|0:100:59
+5      120417469       rs10059997      G       T       .       PASS    AA=G;DP=123     GT:GQ:DP        0|1:100:31      0|0:46:23       0|0:100:69
+11     46193788        .       T       C       .       PASS    AA=T;DP=149     GT:GQ:DP        0|1:100:31      0|0:46:25       0|0:100:82
+10     71086531        rs10762305      A       G       .       PASS    AA=G;DP=146     GT:GQ:DP        0|1:100:31      0|0:46:25       0|0:100:92
+11     27187126        rs4923433       G       T       .       PASS    AA=G;DP=125     GT:GQ:DP        0|1:100:31      0|0:47:14       0|0:100:81
+12     15853950        .       T       C       .       PASS    AA=T;DP=115     GT:GQ:DP        0|1:100:31      0|0:47:14       0|0:63:27
+18     46708950        rs8088812       A       T       .       PASS    AA=A;DP=100     GT:GQ:DP        0|1:100:31      0|0:47:15       0|0:100:54
+4      38451800        rs11466659      G       A       .       PASS    AA=G;DP=118     GT:GQ:DP        0|1:100:31      0|0:47:15       0|0:100:68
+15     29409764        rs60877973      T       A       .       PASS    AA=T;DP=130     GT:GQ:DP        0|1:100:31      0|0:47:16       0|0:100:85
+22     46705477        rs715609        C       T       .       PASS    AA=C;DP=128     GT:GQ:DP        0|1:100:31      0|0:48:20       0|0:100:77
+13     52593534        .       T       C       .       PASS    AA=t;DP=145     GT:GQ:DP        0|1:100:31      0|0:48:21       0|0:100:41
+2      74261683        .       T       C       .       PASS    AA=T;DP=127     GT:GQ:DP        0|1:100:31      0|0:49:21       0|0:100:76
+10     65737645        .       A       G       .       PASS    AA=A;DP=99      GT:GQ:DP        0|1:100:31      0|0:50:15       0|0:100:53
+12     127725203       rs12304603      G       A       .       PASS    AA=G;DP=104     GT:GQ:DP        0|1:100:31      0|0:50:15       0|0:100:58
+16     266827  rs3809656       C       G       .       PASS    AA=G;DP=107     GT:GQ:DP        0|1:100:31      0|0:50:15       0|0:100:60
+5      87301617        .       G       T       .       PASS    AA=G;DP=108     GT:GQ:DP        0|1:100:31      0|0:50:15       0|0:100:64
+3      28557065        rs55716894      T       G       .       PASS    AA=G;DP=111     GT:GQ:DP        0|1:100:31      0|0:50:15       0|0:100:65
+22     15974522        rs56711032      T       C       .       PASS    AA=T;DP=117     GT:GQ:DP        0|1:100:31      0|0:50:15       0|0:100:72
+3      96082801        .       C       T       .       PASS    AA=T;DP=115     GT:GQ:DP        0|1:100:31      0|0:50:15       0|0:100:72
+10     125109588       rs11596665      C       T       .       PASS    AA=C;DP=124     GT:GQ:DP        0|1:100:31      0|0:50:15       0|0:100:78
+20     33615340        .       G       C       .       PASS    AA=g;DP=134     GT:GQ:DP        0|1:100:31      0|0:50:16       0|0:100:48
+19     58300305        rs8109400       C       T       .       PASS    AA=C;DP=108     GT:GQ:DP        0|1:100:31      0|0:50:16       0|0:100:60
+16     24297362        rs11644596      T       G       .       PASS    AA=G;DP=120     GT:GQ:DP        0|1:100:31      0|0:50:16       0|0:100:74
+3      14878540        rs294629        A       G       .       PASS    AA=A;DP=146     GT:GQ:DP        0|1:100:31      0|0:50:20       0|0:95:48
+6      25518802        .       A       G       .       PASS    AA=A;DP=120     GT:GQ:DP        0|1:100:31      0|0:51:21       0|0:100:68
+9      13593271        rs10961166      C       A       .       PASS    AA=C;DP=146     GT:GQ:DP        0|1:100:31      0|0:52:28       0|0:97:44
+10     71968208        rs61733904      G       C       .       PASS    AA=G;DP=107     GT:GQ:DP        0|1:100:31      0|0:53:16       0|0:100:62
+4      2240911 rs2105847       G       C       .       PASS    AA=G;DP=115     GT:GQ:DP        0|1:100:31      0|0:53:16       0|0:100:65
+9      121707751       rs1360693       A       G       .       PASS    AA=G;DP=110     GT:GQ:DP        0|1:100:31      0|0:53:16       0|0:100:67
+3      139640869       .       G       A       .       PASS    AA=G;DP=124     GT:GQ:DP        0|1:100:31      0|0:53:16       0|0:100:78
+6      6957140 rs7743719       C       T       .       PASS    AA=T;DP=76      GT:GQ:DP        0|1:100:31      0|0:53:16       0|0:69:23
+5      60329525        .       T       C       .       PASS    AA=T;DP=112     GT:GQ:DP        0|1:100:31      0|0:53:17       0|0:100:63
+8      135383784       .       A       G       .       PASS    AA=A;DP=110     GT:GQ:DP        0|1:100:31      0|0:53:17       0|0:100:63
+19     9583499 .       A       C       .       PASS    AA=.;DP=123     GT:GQ:DP        0|1:100:31      0|0:53:17       0|0:100:77
+6      92143273        rs9342276       G       A       .       PASS    AA=G;DP=116     GT:GQ:DP        0|1:100:31      0|0:53:18       0|0:100:69
+16     19887731        rs56691419      C       T       .       PASS    AA=C;DP=132     GT:GQ:DP        0|1:100:31      0|0:53:19       0|0:100:82
+6      166076907       rs58443157      A       C       .       PASS    AA=a;DP=133     GT:GQ:DP        0|1:100:31      0|0:53:19       0|0:100:85
+5      114167880       .       C       T       .       PASS    AA=C;DP=126     GT:GQ:DP        0|1:100:31      0|0:54:18       0|0:100:81
+4      86311150        rs7682288       A       G       .       PASS    AA=A;DP=144     GT:GQ:DP        0|1:100:31      0|0:55:28       0|0:100:73
+17     42510329        .       T       G       .       PASS    AA=T;DP=136     GT:GQ:DP        0|1:100:31      0|0:55:28       0|0:100:76
+4      3745326 .       C       G       .       PASS    AA=C;DP=98      GT:GQ:DP        0|1:100:31      0|0:56:17       0|0:100:40
+6      7216083 .       T       C       .       PASS    AA=T;DP=133     GT:GQ:DP        0|1:100:31      0|0:56:17       0|0:100:42
+11     85017083        .       G       T       .       PASS    AA=G;DP=113     GT:GQ:DP        0|1:100:31      0|0:56:17       0|0:100:54
+1      215540481       rs6663400       G       A       .       PASS    AA=G;DP=107     GT:GQ:DP        0|1:100:31      0|0:56:17       0|0:100:59
+11     122089300       .       T       C       .       PASS    AA=C;DP=128     GT:GQ:DP        0|1:100:31      0|0:56:17       0|0:100:81
+10     32803119        rs2002079       G       A       .       PASS    AA=G;DP=131     GT:GQ:DP        0|1:100:31      0|0:56:18       0|0:100:37
+5      37718335        rs60352349      G       A       .       PASS    AA=G;DP=111     GT:GQ:DP        0|1:100:31      0|0:56:18       0|0:100:64
+8      140272727       rs35526579      C       A       .       PASS    AA=C;DP=112     GT:GQ:DP        0|1:100:31      0|0:56:18       0|0:100:65
+1      94240822        .       C       T       .       PASS    AA=c;DP=118     GT:GQ:DP        0|1:100:31      0|0:56:18       0|0:100:69
+1      116836971       rs57338034      C       T       .       PASS    AA=C;DP=97      GT:GQ:DP        0|1:100:31      0|0:56:18       0|0:99:36
+6      64249089        rs4482958       T       C       .       PASS    AA=C;DP=133     GT:GQ:DP        0|1:100:31      0|0:56:19       0|0:100:45
+5      106425641       rs4346759       C       A       .       PASS    AA=C;DP=144     GT:GQ:DP        0|1:100:31      0|0:58:24       0|0:100:90
+8      76232379        .       T       C       .       PASS    AA=T;DP=139     GT:GQ:DP        0|1:100:31      0|0:58:29       0|0:100:34
+4      151184033       .       T       G       .       PASS    AA=G;DP=136     GT:GQ:DP        0|1:100:31      0|0:59:18       0|0:100:43
+4      6035046 rs16838008      C       T       .       PASS    AA=C;DP=104     GT:GQ:DP        0|1:100:31      0|0:59:18       0|0:100:47
+8      37011423        rs2970620       A       G       .       PASS    AA=A;DP=134     GT:GQ:DP        0|1:100:31      0|0:59:18       0|0:100:69
+1      99696076        .       C       G       .       PASS    AA=C;DP=117     GT:GQ:DP        0|1:100:31      0|0:59:18       0|0:100:71
+18     35811448        rs7243443       T       C       .       PASS    AA=T;DP=126     GT:GQ:DP        0|1:100:31      0|0:59:18       0|0:100:79
+19     59344430        rs36662 C       A       .       PASS    AA=a;DP=125     GT:GQ:DP        0|1:100:31      0|0:59:18       0|0:100:79
+3      197414991       .       G       T       .       PASS    AA=G;DP=134     GT:GQ:DP        0|1:100:31      0|0:59:18       0|0:100:87
+16     55346255        rs12930414      G       A       .       PASS    AA=G;DP=101     GT:GQ:DP        0|1:100:31      0|0:59:18       0|0:85:40
+6      79584320        .       G       A       .       PASS    AA=G;DP=86      GT:GQ:DP        0|1:100:31      0|0:59:19       0|0:99:36
+12     5258332 rs56346315      A       G       .       PASS    AA=A;DP=119     GT:GQ:DP        0|1:100:31      0|0:59:20       0|0:100:69
+1      220372712       .       A       G       .       PASS    AA=A;DP=112     GT:GQ:DP        0|1:100:31      0|0:59:22       0|0:100:59
+7      110740539       rs2110309       T       A       .       PASS    AA=T;DP=143     GT:GQ:DP        0|1:100:31      0|0:59:30       0|0:100:83
+3      14294614        rs748116        C       A       .       PASS    AA=C;DP=144     GT:GQ:DP        0|1:100:31      0|0:60:24       0|0:100:88
+2      133405300       .       A       G       .       PASS    AA=A;DP=141     GT:GQ:DP        0|1:100:31      0|0:60:25       0|0:100:85
+2      124379856       .       C       A       .       PASS    AA=C;DP=125     GT:GQ:DP        0|1:100:31      0|0:60:30       0|0:100:67
+2      161105670       .       A       T       .       PASS    AA=A;DP=149     GT:GQ:DP        0|1:100:31      0|0:62:19       0|0:100:48
+2      226755873       .       C       T       .       PASS    AA=T;DP=103     GT:GQ:DP        0|1:100:31      0|0:62:19       0|0:100:54
+14     30394790        .       G       A       .       PASS    AA=G;DP=113     GT:GQ:DP        0|1:100:31      0|0:62:19       0|0:100:61
+1      7550162 .       G       A       .       PASS    AA=G;DP=114     GT:GQ:DP        0|1:100:31      0|0:62:19       0|0:100:65
+15     90813561        rs17522085      C       T       .       PASS    AA=G;DP=147     GT:GQ:DP        0|1:100:31      0|0:62:20       0|0:100:51
+1      191166986       .       C       T       .       PASS    AA=C;DP=106     GT:GQ:DP        0|1:100:31      0|0:62:20       0|0:100:56
+9      835516  rs7040024       A       C       .       PASS    AA=A;DP=106     GT:GQ:DP        0|1:100:31      0|0:62:20       0|0:100:59
+14     86835342        rs8010039       G       A       .       PASS    AA=G;DP=114     GT:GQ:DP        0|1:100:31      0|0:62:20       0|0:100:67
+13     28078057        .       T       C       .       PASS    AA=T;DP=122     GT:GQ:DP        0|1:100:31      0|0:62:20       0|0:100:71
+9      129997413       .       T       A       .       PASS    AA=T;DP=121     GT:GQ:DP        0|1:100:31      0|0:62:20       0|0:100:72
+7      155859590       .       A       G       .       PASS    AA=A;DP=130     GT:GQ:DP        0|1:100:31      0|0:62:20       0|0:100:81
+2      163341049       rs685654        C       T       .       PASS    AA=C;DP=131     GT:GQ:DP        0|1:100:31      0|0:62:21       0|0:100:72
+10     104789658       rs7087040       G       A       .       PASS    AA=A;DP=140     GT:GQ:DP        0|1:100:31      0|0:62:21       0|0:100:91
+12     86384383        rs1353483       T       C       .       PASS    AA=C;DP=135     GT:GQ:DP        0|1:100:31      0|0:62:21       0|0:77:32
+14     55615573        rs171339        C       T       .       PASS    AA=T;DP=131     GT:GQ:DP        0|1:100:31      0|0:62:23       0|0:100:38
+20     16392670        .       G       T       .       PASS    AA=G;DP=120     GT:GQ:DP        0|1:100:31      0|0:62:30       0|0:100:58
+11     34827781        rs12278695      C       T       .       PASS    AA=C;DP=138     GT:GQ:DP        0|1:100:31      0|0:65:20       0|0:100:42
+22     33698435        .       G       T       .       PASS    AA=G;DP=115     GT:GQ:DP        0|1:100:31      0|0:65:20       0|0:100:65
+5      110575872       .       T       A       .       PASS    AA=T;DP=116     GT:GQ:DP        0|1:100:31      0|0:65:20       0|0:100:65
+2      211283993       rs10211086      C       G       .       PASS    AA=G;DP=117     GT:GQ:DP        0|1:100:31      0|0:65:20       0|0:100:68
+9      96790739        .       A       G       .       PASS    AA=A;DP=124     GT:GQ:DP        0|1:100:31      0|0:65:20       0|0:100:74
+18     10724802        rs12956567      G       A       .       PASS    AA=G;DP=133     GT:GQ:DP        0|1:100:31      0|0:65:20       0|0:100:78
+8      109802553       rs870234        A       G       .       PASS    AA=A;DP=131     GT:GQ:DP        0|1:100:31      0|0:65:20       0|0:100:80
+8      4450007 rs13269869      T       C       .       PASS    AA=T;DP=134     GT:GQ:DP        0|1:100:31      0|0:65:20       0|0:100:84
+14     48828679        rs4076160       A       G       .       PASS    AA=A;DP=121     GT:GQ:DP        0|1:100:31      0|0:65:21       0|0:100:73
+12     26505268        .       T       C       .       PASS    AA=T;DP=139     GT:GQ:DP        0|1:100:31      0|0:65:21       0|0:100:92
+2      236890823       .       G       A       .       PASS    AA=G;DP=135     GT:GQ:DP        0|1:100:31      0|0:65:22       0|0:100:87
+13     39631944        .       G       A       .       PASS    AA=G;DP=111     GT:GQ:DP        0|1:100:31      0|0:65:23       0|0:100:56
+2      123561941       rs12105870      C       A       .       PASS    AA=C;DP=119     GT:GQ:DP        0|1:100:31      0|0:65:26       0|0:100:60
+7      52821014        .       G       A       .       PASS    AA=G;DP=129     GT:GQ:DP        0|1:100:31      0|0:65:31       0|0:100:64
+8      8658641 .       C       T       .       PASS    AA=c;DP=130     GT:GQ:DP        0|1:100:31      0|0:67:25       0|0:100:34
+16     88588160        .       T       G       .       PASS    AA=T;DP=155     GT:GQ:DP        0|1:100:31      0|0:68:21       0|0:100:54
+4      147629050       .       A       G       .       PASS    AA=A;DP=110     GT:GQ:DP        0|1:100:31      0|0:68:21       0|0:100:57
+11     24850682        .       T       C       .       PASS    AA=T;DP=114     GT:GQ:DP        0|1:100:31      0|0:68:21       0|0:100:62
+11     61753853        rs4122107       A       G       .       PASS    AA=a;DP=116     GT:GQ:DP        0|1:100:31      0|0:68:21       0|0:100:65
+21     41961299        .       C       A       .       PASS    AA=C;DP=120     GT:GQ:DP        0|1:100:31      0|0:68:21       0|0:100:70
+8      29464613        .       T       A       .       PASS    AA=T;DP=124     GT:GQ:DP        0|1:100:31      0|0:68:21       0|0:100:71
+11     59002059        .       T       C       .       PASS    AA=t;DP=125     GT:GQ:DP        0|1:100:31      0|0:68:21       0|0:100:72
+14     62508412        .       T       C       .       PASS    AA=T;DP=122     GT:GQ:DP        0|1:100:31      0|0:68:21       0|0:100:73
+2      159481099       rs7567995       G       T       .       PASS    AA=G;DP=122     GT:GQ:DP        0|1:100:31      0|0:68:21       0|0:100:74
+1      105505574       rs4328114       A       G       .       PASS    AA=A;DP=128;HM2;HM3     GT:GQ:DP        0|1:100:31      0|0:68:21       0|0:100:77
+5      78279263        .       G       A       .       PASS    AA=G;DP=130     GT:GQ:DP        0|1:100:31      0|0:68:21       0|0:100:80
+2      236027584       rs7578014       A       G       .       PASS    AA=A;DP=132     GT:GQ:DP        0|1:100:31      0|0:68:22       0|0:100:78
+4      81472412        rs10033567      G       A       .       PASS    AA=G;DP=138     GT:GQ:DP        0|1:100:31      0|0:68:22       0|0:100:87
+7      63396108        rs611097        G       A       .       PASS    AA=A;DP=142     GT:GQ:DP        0|1:100:31      0|0:68:22       0|0:100:89
+10     129432516       rs12264783      T       C       .       PASS    AA=T;DP=145     GT:GQ:DP        0|1:100:31      0|0:68:22       0|0:100:93
+14     77192502        rs61990854      T       C       .       PASS    AA=T;DP=124     GT:GQ:DP        0|1:100:31      0|0:68:24       0|0:100:72
+13     50422400        .       T       C       .       PASS    AA=T;DP=163     GT:GQ:DP        0|1:100:31      0|0:68:37       0|0:100:51
+17     31270360        rs2702948       G       A       .       PASS    AA=-;DP=126     GT:GQ:DP        0|1:100:31      0|0:69:22       0|0:100:75
+2      134507644       rs6736502       T       G       .       PASS    AA=G;DP=150     GT:GQ:DP        0|1:100:31      0|0:69:33       0|0:100:83
+12     65698080        .       A       G       .       PASS    AA=A;DP=159     GT:GQ:DP        0|1:100:31      0|0:71:22       0|0:100:58
+6      169678465       rs2982409       A       G       .       PASS    AA=G;DP=115     GT:GQ:DP        0|1:100:31      0|0:71:22       0|0:100:64
+20     38886731        rs6029363       C       A       .       PASS    AA=C;DP=123     GT:GQ:DP        0|1:100:31      0|0:71:22       0|0:100:67
+9      121253178       rs7866078       G       A       .       PASS    AA=G;DP=133     GT:GQ:DP        0|1:100:31      0|0:71:22       0|0:100:76
+12     53048374        .       G       C       .       PASS    AA=G;DP=142     GT:GQ:DP        0|1:100:31      0|0:71:22       0|0:100:88
+12     42704109        rs17094007      G       A       .       PASS    AA=G;DP=157     GT:GQ:DP        0|1:100:31      0|0:71:23       0|0:100:53
+20     54168176        rs1886957       T       C       .       PASS    AA=T;DP=139     GT:GQ:DP        0|1:100:31      0|0:71:23       0|0:100:87
+1      145844540       rs7524103       C       T       .       PASS    AA=T;DP=129     GT:GQ:DP        0|1:100:31      0|0:72:27       0|0:100:68
+9      92985988        rs16907244      A       G       .       PASS    AA=A;DP=136     GT:GQ:DP        0|1:100:31      0|0:74:23       0|0:100:42
+3      187727046       .       G       C       .       PASS    AA=G;DP=148     GT:GQ:DP        0|1:100:31      0|0:74:23       0|0:100:48
+6      2966234 rs4959753       G       A       .       PASS    AA=G;DP=109     GT:GQ:DP        0|1:100:31      0|0:74:23       0|0:100:55
+5      80255888        rs10060137      C       T       .       PASS    AA=C;DP=111     GT:GQ:DP        0|1:100:31      0|0:74:23       0|0:100:57
+6      22116105        .       G       A       .       PASS    AA=G;DP=111     GT:GQ:DP        0|1:100:31      0|0:74:23       0|0:100:57
+3      88578394        rs13067492      C       T       .       PASS    AA=C;DP=124     GT:GQ:DP        0|1:100:31      0|0:74:23       0|0:100:69
+18     63662930        rs518016        C       G       .       PASS    AA=C;DP=101     GT:GQ:DP        0|1:100:31      0|0:74:24       0|0:100:46
+9      112367194       rs62571273      G       A       .       PASS    AA=G;DP=111     GT:GQ:DP        0|1:100:31      0|0:74:24       0|0:100:56
+6      14568160        .       T       G       .       PASS    AA=T;DP=114     GT:GQ:DP        0|1:100:31      0|0:74:24       0|0:100:57
+2      10877861        rs13431852      T       C       .       PASS    AA=T;DP=113     GT:GQ:DP        0|1:100:31      0|0:74:24       0|0:100:59
+12     94684723        rs28371929      C       T       .       PASS    AA=C;DP=146     GT:GQ:DP        0|1:100:31      0|0:74:30       0|0:100:75
+4      13463069        .       C       T       .       PASS    AA=C;DP=127     GT:GQ:DP        0|1:100:31      0|0:77:24       0|0:100:72
+6      54999503        .       C       T       .       PASS    AA=T;DP=138     GT:GQ:DP        0|1:100:31      0|0:77:24       0|0:100:84
+5      46105637        .       C       T       .       PASS    AA=.;DP=114     GT:GQ:DP        0|1:100:31      0|0:77:25       0|0:100:57
+2      106520763       rs6729848       G       A       .       PASS    AA=.;DP=117     GT:GQ:DP        0|1:100:31      0|0:77:25       0|0:100:61
+13     41468855        rs17062690      A       G       .       PASS    AA=A;DP=122     GT:GQ:DP        0|1:100:31      0|0:77:25       0|0:100:67
+18     20258705        rs1833400       G       C       .       PASS    AA=G;DP=132     GT:GQ:DP        0|1:100:31      0|0:77:25       0|0:100:75
+4      143452152       rs1872294       C       T       .       PASS    AA=C;DP=131     GT:GQ:DP        0|1:100:31      0|0:77:25       0|0:100:75
+11     125398708       rs11829020      G       A       .       PASS    AA=G;DP=143     GT:GQ:DP        0|1:100:31      0|0:77:25       0|0:100:88
+8      24678002        rs17052570      A       T       .       PASS    AA=T;DP=144     GT:GQ:DP        0|1:100:31      0|0:77:25       0|0:100:88
+1      114905160       .       T       C       .       PASS    AA=T;DP=132     GT:GQ:DP        0|1:100:31      0|0:77:26       0|0:100:74
+14     38508662        rs10149971      A       G       .       PASS    AA=G;DP=152     GT:GQ:DP        0|1:100:31      0|0:79:28       0|0:100:48
+12     31081842        .       G       A       .       PASS    AA=G;DP=152     GT:GQ:DP        0|1:100:31      0|0:80:25       0|0:100:41
+18     29553926        rs59839063      A       G       .       PASS    AA=A;DP=148     GT:GQ:DP        0|1:100:31      0|0:80:25       0|0:100:49
+13     29430001        rs4238129       T       G       .       PASS    AA=T;DP=169     GT:GQ:DP        0|1:100:31      0|0:80:25       0|0:100:56
+22     42422244        .       A       G       .       PASS    AA=A;DP=128     GT:GQ:DP        0|1:100:31      0|0:80:25       0|0:100:56
+3      131480206       .       A       G       .       PASS    AA=A;DP=115     GT:GQ:DP        0|1:100:31      0|0:80:25       0|0:100:59
+3      177868989       .       T       G       .       PASS    AA=G;DP=116     GT:GQ:DP        0|1:100:31      0|0:80:25       0|0:100:59
+2      39759822        .       G       T       .       PASS    AA=G;DP=118     GT:GQ:DP        0|1:100:31      0|0:80:25       0|0:100:62
+5      94558213        .       G       T       .       PASS    AA=G;DP=128     GT:GQ:DP        0|1:100:31      0|0:80:25       0|0:100:71
+20     35749095        rs57231012      C       G       .       PASS    AA=C;DP=126     GT:GQ:DP        0|1:100:31      0|0:80:25       0|0:100:74
+12     108658666       .       T       C       .       PASS    AA=T;DP=138     GT:GQ:DP        0|1:100:31      0|0:80:25       0|0:100:79
+2      80288716        .       T       C       .       PASS    AA=T;DP=135     GT:GQ:DP        0|1:100:31      0|0:80:25       0|0:100:80
+8      132686785       rs13250412      G       A       .       PASS    AA=G;DP=136     GT:GQ:DP        0|1:100:31      0|0:80:25       0|0:100:81
+11     7232416 rs10743012      C       A       .       PASS    AA=C;DP=140     GT:GQ:DP        0|1:100:31      0|0:80:25       0|0:100:84
+1      29638189        rs9426449       A       T       .       PASS    AA=A;DP=145;HM2;HM3     GT:GQ:DP        0|1:100:31      0|0:80:25       0|0:100:87
+7      43268090        .       A       G       .       PASS    AA=A;DP=144     GT:GQ:DP        0|1:100:31      0|0:80:25       0|0:100:87
+11     44658534        .       G       A       .       PASS    AA=G;DP=154     GT:GQ:DP        0|1:100:31      0|0:80:25       0|0:100:98
+10     19253225        rs10763731      A       G       .       PASS    AA=A;DP=121     GT:GQ:DP        0|1:100:31      0|0:80:28       0|0:100:63
+18     57292206        .       T       A       .       PASS    AA=T;DP=134     GT:GQ:DP        0|1:100:31      0|0:82:27       0|0:100:76
+19     36079115        rs278210        G       A       .       PASS    AA=G;DP=156     GT:GQ:DP        0|1:100:31      0|0:83:26       0|0:100:55
+12     30849192        rs4931371       T       A       .       PASS    AA=T;DP=135     GT:GQ:DP        0|1:100:31      0|0:83:26       0|0:100:79
+20     48595593        rs6126042       C       T       .       PASS    AA=C;DP=143     GT:GQ:DP        0|1:100:31      0|0:83:26       0|0:100:87
+17     6634426 rs17804569      T       C       .       PASS    AA=C;DP=144     GT:GQ:DP        0|1:100:31      0|0:83:26       0|0:100:89
+16     81515618        rs7404932       C       G       .       PASS    AA=C;DP=123     GT:GQ:DP        0|1:100:31      0|0:83:27       0|0:100:65
+1      69861400        .       A       G       .       PASS    AA=A;DP=138     GT:GQ:DP        0|1:100:31      0|0:83:27       0|0:100:80
+13     60919676        rs9570589       C       T       .       PASS    AA=.;DP=139     GT:GQ:DP        0|1:100:31      0|0:83:28       0|0:100:82
+6      138346398       rs12528207      G       A       .       PASS    AA=G;DP=159     GT:GQ:DP        0|1:100:31      0|0:83:30       0|0:100:59
+6      89387365        .       T       G       .       PASS    AA=.;DP=128     GT:GQ:DP        0|1:100:31      0|0:84:33       0|0:100:66
+15     90010647        rs12439268      A       G       .       PASS    AA=A;DP=135     GT:GQ:DP        0|1:100:31      0|0:86:27       0|0:100:36
+4      24479151        rs16876266      C       T       .       PASS    AA=C;DP=139     GT:GQ:DP        0|1:100:31      0|0:86:27       0|0:100:40
+5      126103917       .       T       A       .       PASS    AA=T;DP=106     GT:GQ:DP        0|1:100:31      0|0:86:27       0|0:100:40
+12     115811975       rs7294919       T       C       .       PASS    AA=T;DP=130     GT:GQ:DP        0|1:100:31      0|0:86:27       0|0:100:73
+3      69136277        .       T       A       .       PASS    AA=T;DP=130     GT:GQ:DP        0|1:100:31      0|0:86:27       0|0:100:77
+5      172883575       rs10055621      G       A       .       PASS    AA=G;DP=139     GT:GQ:DP        0|1:100:31      0|0:86:27       0|0:100:78
+20     13393512        .       A       G       .       PASS    AA=A;DP=140     GT:GQ:DP        0|1:100:31      0|0:86:27       0|0:100:83
+8      5411098 .       T       A       .       PASS    AA=T;DP=144     GT:GQ:DP        0|1:100:31      0|0:86:28       0|0:100:41
+5      92519881        rs7722832       C       G       .       PASS    AA=C;DP=145     GT:GQ:DP        0|1:100:31      0|0:86:28       0|0:100:44
+2      101385396       .       G       A       .       PASS    AA=G;DP=118     GT:GQ:DP        0|1:100:31      0|0:86:28       0|0:100:58
+3      20529546        .       A       G       .       PASS    AA=A;DP=116     GT:GQ:DP        0|1:100:31      0|0:86:28       0|0:100:58
+3      161877699       .       T       A       .       PASS    AA=T;DP=139     GT:GQ:DP        0|1:100:31      0|0:86:28       0|0:100:82
+7      123229307       .       C       T       .       PASS    AA=C;DP=157     GT:GQ:DP        0|1:100:31      0|0:87:33       0|0:100:46
+20     23900920        .       T       C       .       PASS    AA=T;DP=126     GT:GQ:DP        0|1:100:31      0|0:89:28       0|0:100:67
+9      27949689        rs10124328      G       C       .       PASS    AA=A;DP=134     GT:GQ:DP        0|1:100:31      0|0:89:28       0|0:100:77
+11     57925892        rs11229407      A       G       .       PASS    AA=a;DP=140     GT:GQ:DP        0|1:100:31      0|0:89:28       0|0:100:80
+14     22762196        rs12893114      A       G       .       PASS    AA=A;DP=137     GT:GQ:DP        0|1:100:31      0|0:89:28       0|0:100:80
+11     78013681        .       C       T       .       PASS    AA=C;DP=144     GT:GQ:DP        0|1:100:31      0|0:89:28       0|0:100:86
+6      80659643        rs62411155      G       A       .       PASS    AA=G;DP=138     GT:GQ:DP        0|1:100:31      0|0:89:29       0|0:100:35
+20     31999124        rs4911137       C       T       .       PASS    AA=C;DP=144     GT:GQ:DP        0|1:100:31      0|0:89:29       0|0:100:48
+3      66448659        .       C       G       .       PASS    AA=C;DP=155     GT:GQ:DP        0|1:100:31      0|0:89:29       0|0:100:49
+8      5247630 .       A       G       .       PASS    AA=A;DP=132     GT:GQ:DP        0|1:100:31      0|0:89:29       0|0:100:60
+4      18346852        rs9992040       C       G       .       PASS    AA=C;DP=135     GT:GQ:DP        0|1:100:31      0|0:89:29       0|0:100:73
+4      148092214       rs969511        A       G       .       PASS    AA=A;DP=139     GT:GQ:DP        0|1:100:31      0|0:89:29       0|0:100:81
+5      75751908        rs62363252      G       A       .       PASS    AA=G;DP=152     GT:GQ:DP        0|1:100:31      0|0:89:31       0|0:100:52
+11     104779498       rs1124520       A       G       .       PASS    AA=A;DP=123     GT:GQ:DP        0|1:100:31      0|0:92:29       0|0:100:62
+16     82008463        rs17214677      A       G       .       PASS    AA=A;DP=137     GT:GQ:DP        0|1:100:31      0|0:92:29       0|0:100:77
+1      7240345 rs6701388       T       A       .       PASS    AA=T;DP=144     GT:GQ:DP        0|1:100:31      0|0:92:29       0|0:100:85
+9      121884764       rs870777        T       C       .       PASS    AA=T;DP=167     GT:GQ:DP        0|1:100:31      0|0:92:31       0|0:100:44
+6      123903886       .       A       G       .       PASS    AA=A;DP=137     GT:GQ:DP        0|1:100:31      0|0:95:30       0|0:100:38
+5      156874863       rs11740562      A       G       .       PASS    AA=A;DP=149     GT:GQ:DP        0|1:100:31      0|0:95:30       0|0:100:46
+17     10639369        rs11078861      G       C       .       PASS    AA=C;DP=125     GT:GQ:DP        0|1:100:31      0|0:95:30       0|0:100:62
+12     97787893        .       C       T       .       PASS    AA=C;DP=136     GT:GQ:DP        0|1:100:31      0|0:95:30       0|0:100:72
+7      130552315       .       A       C       .       PASS    AA=A;DP=148     GT:GQ:DP        0|1:100:31      0|0:95:30       0|0:100:75
+9      77716169        rs11144685      C       A       .       PASS    AA=C;DP=136     GT:GQ:DP        0|1:100:31      0|0:95:30       0|0:100:76
+13     94425011        rs10508010      A       C       .       PASS    AA=A;DP=146     GT:GQ:DP        0|1:100:31      0|0:95:30       0|0:100:80
+6      57236385        rs12178588      A       G       .       PASS    AA=G;DP=155     GT:GQ:DP        0|1:100:31      0|0:95:31       0|0:100:50
+1      195649147       rs2821118       C       T       .       PASS    AA=C;DP=128     GT:GQ:DP        0|1:100:31      0|0:98:31       0|0:100:67
+1      114011998       rs12119076      A       C       .       PASS    AA=A;DP=144;HM2 GT:GQ:DP        0|1:100:31      0|0:98:31       0|0:100:82
+21     17789624        .       G       A       .       PASS    AA=G;DP=140     GT:GQ:DP        0|1:100:31      0|0:98:32       0|0:100:38
+2      41758831        rs10445922      A       G       .       PASS    AA=A;DP=130     GT:GQ:DP        0|1:100:31      0|0:98:32       0|0:100:70
+7      11028945        rs2301962       C       T       .       PASS    AA=T;DP=134     GT:GQ:DP        0|1:100:31      0|0:98:34       0|0:78:28
+2      5531361 .       T       C       .       PASS    AA=T;DP=149     GT:GQ:DP        0|1:100:31      0|0:98:35       0|0:100:85
+13     94711083        rs4148432       C       T       .       PASS    AA=T;DP=132     GT:GQ:DP        0|1:100:31      0|1:100:17      0|0:100:85
+14     77950089        rs8006308       G       A       .       PASS    AA=G;DP=119     GT:GQ:DP        0|1:100:31      0|1:100:18      0|0:100:71
+2      65569336        rs840943        T       C       .       PASS    AA=t;DP=125     GT:GQ:DP        0|1:100:31      0|1:100:18      0|0:100:76
+8      138311573       rs10097266      G       T       .       PASS    AA=G;DP=109     GT:GQ:DP        0|1:100:31      0|1:100:19      0|0:100:59
+20     42358335        rs6031503       A       G       .       PASS    AA=G;DP=136     GT:GQ:DP        0|1:100:31      0|1:100:20      0|0:100:86
+1      238760334       rs3748540       C       T       .       PASS    AA=T;DP=107;HM2;HM3     GT:GQ:DP        0|1:100:31      0|1:100:21      0|0:100:57
+15     52930140        rs12902998      G       A       .       PASS    AA=A;DP=124     GT:GQ:DP        0|1:100:31      0|1:100:21      0|0:100:72
+3      2795695 rs958048        A       C       .       PASS    AA=A;DP=116     GT:GQ:DP        0|1:100:31      0|1:100:22      0|0:100:64
+15     86775015        rs7180493       T       G       .       PASS    AA=T;DP=119     GT:GQ:DP        0|1:100:31      0|1:100:22      0|0:100:66
+11     44810294        .       G       A       .       PASS    AA=G;DP=136     GT:GQ:DP        0|1:100:31      0|1:100:22      0|0:100:84
+11     20264902        rs11025470      G       A       .       PASS    AA=g;DP=144     GT:GQ:DP        0|1:100:31      0|1:100:22      0|0:100:91
+4      184152391       .       G       A       .       PASS    AA=G;DP=122     GT:GQ:DP        0|1:100:31      0|1:100:23      0|0:100:67
+13     28839067        rs2388091       T       C       .       PASS    AA=C;DP=137     GT:GQ:DP        0|1:100:31      0|1:100:23      0|0:100:86
+15     94585105        rs11073471      G       A       .       PASS    AA=A;DP=121     GT:GQ:DP        0|1:100:31      0|1:100:24      0|0:100:67
+2      111321716       rs755578        C       T       .       PASS    AA=T;DP=122     GT:GQ:DP        0|1:100:31      0|1:100:24      0|0:100:67
+12     113205877       rs7962467       A       G       .       PASS    AA=G;DP=131     GT:GQ:DP        0|1:100:31      0|1:100:24      0|0:100:77
+7      112877174       rs56299136      A       T       .       PASS    AA=A;DP=127     GT:GQ:DP        0|1:100:31      0|1:100:24      0|0:90:31
+2      7829176 rs10929500      G       A       .       PASS    AA=G;DP=127     GT:GQ:DP        0|1:100:31      0|1:100:25      0|0:100:72
+2      119636545       rs34949327      G       C       .       PASS    AA=C;DP=131     GT:GQ:DP        0|1:100:31      0|1:100:25      0|0:100:73
+2      204541176       rs4675388       C       T       .       PASS    AA=T;DP=143     GT:GQ:DP        0|1:100:31      0|1:100:25      0|0:100:75
+5      38834387        rs7710633       A       T       .       PASS    AA=A;DP=134     GT:GQ:DP        0|1:100:31      0|1:100:25      0|0:100:76
+15     77497555        rs769769        C       T       .       PASS    AA=T;DP=129     GT:GQ:DP        0|1:100:31      0|1:100:25      0|0:100:77
+6      51933725        rs9474122       C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        0|1:100:31      0|1:100:26      0|0:100:65
+6      25619891        rs391544        C       T       .       PASS    AA=T;DP=127     GT:GQ:DP        0|1:100:31      0|1:100:26      0|0:100:72
+10     111682542       rs11194917      C       G       .       PASS    AA=A;DP=135     GT:GQ:DP        0|1:100:31      0|1:100:26      0|0:100:76
+16     78097998        .       G       A       .       PASS    AA=G;DP=145     GT:GQ:DP        0|1:100:31      0|1:100:26      0|0:100:90
+12     19038697        rs11044375      G       A       .       PASS    AA=G;DP=119     GT:GQ:DP        0|1:100:31      0|1:100:27      0|0:100:61
+2      171082699       rs17271273      T       C       .       PASS    AA=T;DP=132     GT:GQ:DP        0|1:100:31      0|1:100:27      0|0:100:74
+4      165554363       rs13106918      T       C       .       PASS    AA=C;DP=141     GT:GQ:DP        0|1:100:31      0|1:100:27      0|0:100:84
+12     116537373       rs17618724      G       C       .       PASS    AA=G;DP=146     GT:GQ:DP        0|1:100:31      0|1:100:29      0|0:100:93
+5      42918696        rs315248        T       C       .       PASS    AA=T;DP=135     GT:GQ:DP        0|1:100:31      0|1:100:29      0|0:84:29
+8      74780056        rs6472798       T       C       .       PASS    AA=C;DP=143     GT:GQ:DP        0|1:100:31      0|1:100:30      0|0:100:79
+1      10740707        rs6689272       A       G       .       PASS    AA=A;DP=155     GT:GQ:DP        0|1:100:31      0|1:100:32      0|0:100:46
+17     769482  rs6598835       C       G       .       PASS    AA=g;DP=159     GT:GQ:DP        0|1:100:31      0|1:100:33      0|0:100:48
+2      13548255        rs60426859      C       T       .       PASS    AA=C;DP=139     GT:GQ:DP        0|1:100:31      0|1:100:33      0|0:100:74
+9      122863453       rs2416813       C       G       .       PASS    AA=G;DP=119     GT:GQ:DP        0|1:100:31      0|1:17:21       0|0:100:68
+10     96532584        .       C       T       .       PASS    AA=.;DP=112     GT:GQ:DP        0|1:100:31      0|1:26:13       0|0:100:66
+3      190036271       rs4686493       A       G       .       PASS    AA=a;DP=109     GT:GQ:DP        0|1:100:31      0|1:33:14       0|0:100:68
+6      103728249       rs17063857      C       G       .       PASS    AA=c;DP=102     GT:GQ:DP        0|1:100:31      0|1:33:23       0|0:100:48
+6      45707648        rs1831268       C       T       .       PASS    AA=C;DP=122     GT:GQ:DP        0|1:100:31      0|1:37:21       0|0:100:70
+2      55509642        rs12623605      G       A       .       PASS    AA=G;DP=110     GT:GQ:DP        0|1:100:31      0|1:37:27       0|0:100:53
+14     50592904        rs4243568       T       C       .       PASS    AA=C;DP=107     GT:GQ:DP        0|1:100:31      0|1:40:18       0|0:100:57
+8      108887509       .       A       T       .       PASS    AA=A;DP=138     GT:GQ:DP        0|1:100:31      0|1:42:21       0|0:100:41
+12     63972488        rs12311523      C       A       .       PASS    AA=C;DP=138     GT:GQ:DP        0|1:100:31      0|1:4:28        0|0:100:82
+12     122954356       .       G       A       .       PASS    AA=G;DP=97      GT:GQ:DP        0|1:100:31      0|1:51:15       0|0:100:39
+3      7808526 rs161924        A       G       .       PASS    AA=G;DP=106     GT:GQ:DP        0|1:100:31      0|1:56:17       0|0:100:58
+12     128399834       rs7138156       T       C       .       PASS    AA=C;DP=130     GT:GQ:DP        0|1:100:31      0|1:57:23       0|0:100:75
+1      61169458        rs6665356       A       T       .       PASS    AA=A;DP=119;HM2 GT:GQ:DP        0|1:100:31      0|1:59:21       0|0:100:63
+2      7784943 .       T       C       .       PASS    AA=T;DP=141     GT:GQ:DP        0|1:100:31      0|1:65:22       0|0:100:87
+7      51943305        rs392035        T       C       .       PASS    AA=C;DP=150     GT:GQ:DP        0|1:100:31      0|1:65:35       0|0:100:76
+15     31637188        rs3794583       C       A       .       PASS    AA=C;DP=112     GT:GQ:DP        0|1:100:31      0|1:68:18       0|0:100:67
+8      144534410       rs13275994      C       T       .       PASS    AA=c;DP=116     GT:GQ:DP        0|1:100:31      0|1:74:15       0|0:100:65
+22     44817801        .       A       T       .       PASS    AA=A;DP=100     GT:GQ:DP        0|1:100:31      0|1:76:16       0|0:100:41
+6      3246004 rs6903857       C       T       .       PASS    AA=C;DP=154     GT:GQ:DP        0|1:100:31      0|1:76:19       0|0:100:53
+5      44863049        rs6867533       G       T       .       PASS    AA=T;DP=133     GT:GQ:DP        0|1:100:31      0|1:76:23       0|0:100:64
+4      84747726        rs28572398      G       A       .       PASS    AA=g;DP=97      GT:GQ:DP        0|1:100:31      0|1:77:11       0|0:100:55
+4      154179411       rs4516696       G       A       .       PASS    AA=G;DP=121     GT:GQ:DP        0|1:100:31      0|1:77:22       0|0:100:68
+8      108058949       .       G       A       .       PASS    AA=G;DP=140     GT:GQ:DP        0|1:100:31      0|1:79:29       0|0:100:82
+1      165868177       rs1883577       A       C       .       PASS    AA=C;DP=165     GT:GQ:DP        0|1:100:31      0|1:80:20       0|0:100:59
+8      10560359        rs6991320       A       G       .       PASS    AA=A;DP=132     GT:GQ:DP        0|1:100:31      0|1:81:25       0|0:100:64
+1      162923528       rs1552562       C       T       .       PASS    AA=C;DP=142     GT:GQ:DP        0|1:100:31      0|1:83:19       0|0:100:92
+13     39520495        rs422386        A       G       .       PASS    AA=A;DP=128     GT:GQ:DP        0|1:100:31      0|1:84:25       0|0:100:72
+1      18394276        rs767654        T       C       .       PASS    AA=T;DP=149;HM2;HM3     GT:GQ:DP        0|1:100:31      0|1:85:19       0|0:100:97
+3      41817133        rs6599178       C       T       .       PASS    AA=T;DP=111     GT:GQ:DP        0|1:100:31      0|1:86:16       0|0:100:63
+3      927830  .       T       C       .       PASS    AA=t;DP=134     GT:GQ:DP        0|1:100:31      0|1:86:29       0|0:100:75
+2      29398558        rs13404555      T       C       .       PASS    AA=T;DP=94      GT:GQ:DP        0|1:100:31      0|1:90:15       0|0:100:38
+2      184251898       rs12613531      G       A       .       PASS    AA=A;DP=112     GT:GQ:DP        0|1:100:31      0|1:91:14       0|0:100:70
+4      170493735       rs10866336      C       G       .       PASS    AA=G;DP=137     GT:GQ:DP        0|1:100:31      0|1:91:20       0|0:100:87
+11     123190899       rs948161        A       G       .       PASS    AA=G;DP=128     GT:GQ:DP        0|1:100:31      0|1:94:18       0|0:100:79
+1      43315993        rs530292        G       A       .       PASS    AA=G;DP=137     GT:GQ:DP        0|1:100:31      0|1:94:19       0|0:100:88
+12     63278684        rs7304183       C       T       .       PASS    AA=T;DP=133     GT:GQ:DP        0|1:100:31      0|1:94:23       0|0:100:81
+12     51695521        rs2176927       G       A       .       PASS    AA=A;DP=115     GT:GQ:DP        0|1:100:31      0|1:96:21       0|0:100:63
+4      1949758 rs17132108      G       C       .       PASS    AA=C;DP=145     GT:GQ:DP        0|1:100:31      0|1:97:22       0|0:100:95
+12     26387712        rs7979004       G       A       .       PASS    AA=G;DP=119     GT:GQ:DP        0|1:100:31      0|1:97:27       0|0:100:62
+2      117317868       rs11890339      A       T       .       PASS    AA=T;DP=115     GT:GQ:DP        0|1:100:31      0|1:98:16       0|0:100:69
+9      106855650       rs905086        T       A       .       PASS    AA=C;DP=110     GT:GQ:DP        0|1:100:31      1|1:11:13       0|1:100:66
+22     41494127        rs55904876      C       T       .       PASS    AA=T;DP=100     GT:GQ:DP        0|1:100:31      1|1:12:5        0|1:100:55
+10     74217039        rs7081970       C       T       .       PASS    AA=T;DP=123     GT:GQ:DP        0|1:100:31      1|1:16:17       0|1:100:74
+12     124870940       rs35488269      T       A       .       PASS    AA=A;DP=114     GT:GQ:DP        0|1:100:31      1|1:20:16       0|1:100:70
+15     83705236        rs4842878       C       T       .       PASS    AA=C;DP=104     GT:GQ:DP        0|1:100:31      1|1:25:18       0|1:100:43
+18     44377669        rs7227797       A       G       .       PASS    AA=G;DP=108     GT:GQ:DP        0|1:100:31      1|1:27:10       0|1:100:41
+10     131798596       rs4751162       G       A       .       PASS    AA=A;DP=135     GT:GQ:DP        0|1:100:31      1|1:27:10       0|1:100:93
+22     45256916        rs738459        C       G       .       PASS    AA=C;DP=112     GT:GQ:DP        0|1:100:31      1|1:30:11       0|1:100:70
+13     79372215        rs1966713       C       T       .       PASS    AA=T;DP=121     GT:GQ:DP        0|1:100:31      1|1:30:11       0|1:100:74
+12     70788121        rs1351897       A       C       .       PASS    AA=C;DP=105     GT:GQ:DP        0|1:100:31      1|1:33:18       0|1:100:55
+4      190120203       rs59198370      T       C       .       PASS    AA=C;DP=104     GT:GQ:DP        0|1:100:31      1|1:36:13       0|1:100:61
+19     50073874        rs6859  A       G       .       PASS    AA=G;DP=136     GT:GQ:DP        0|1:100:31      1|1:36:14       0|1:100:88
+4      167399031       rs382628        T       G       .       PASS    AA=T;DP=123     GT:GQ:DP        0|1:100:31      1|1:36:18       0|1:100:69
+19     56114689        rs10427094      C       T       .       PASS    AA=C;DP=126     GT:GQ:DP        0|1:100:31      1|1:38:20       0|1:100:76
+1      200131453       rs2644114       A       G       .       PASS    AA=G;DP=124;HM2;HM3     GT:GQ:DP        0|1:100:31      1|1:39:14       0|1:100:37
+6      55475339        rs12110483      T       C       .       PASS    AA=C;DP=96      GT:GQ:DP        0|1:100:31      1|1:39:14       0|1:100:50
+9      29429530        rs10757862      C       T       .       PASS    AA=C;DP=109     GT:GQ:DP        0|1:100:31      1|1:41:19       0|1:100:60
+7      38293408        rs7787775       G       A       .       PASS    AA=T;DP=107     GT:GQ:DP        0|1:100:31      1|1:42:15       0|1:100:65
+14     26795882        rs202966        T       C       .       PASS    AA=N;DP=112     GT:GQ:DP        0|1:100:31      1|1:42:22       0|1:100:59
+4      173295854       rs6839159       A       G       .       PASS    AA=A;DP=116     GT:GQ:DP        0|1:100:31      1|1:43:21       0|1:100:63
+15     52311598        rs8030298       G       A       .       PASS    AA=A;DP=94      GT:GQ:DP        0|1:100:31      1|1:45:16       0|1:100:36
+14     78418192        rs28852487      A       T       .       PASS    AA=A;DP=139     GT:GQ:DP        0|1:100:31      1|1:45:16       0|1:100:51
+8      34651643        rs7005808       T       C       .       PASS    AA=C;DP=117     GT:GQ:DP        0|1:100:31      1|1:45:16       0|1:100:74
+22     32228444        rs34593514      C       T       .       PASS    AA=T;DP=105     GT:GQ:DP        0|1:100:31      1|1:45:18       0|1:100:55
+19     51446554        rs7257950       G       A       .       PASS    AA=a;DP=138     GT:GQ:DP        0|1:100:31      1|1:45:23       0|1:100:82
+1      28333332        rs11247757      A       G       .       PASS    AA=A;DP=149;HM2;HM3     GT:GQ:DP        0|1:100:31      1|1:48:17       0|1:100:51
+12     112614102       rs7136086       T       C       .       PASS    AA=T;DP=115     GT:GQ:DP        0|1:100:31      1|1:48:17       0|1:100:68
+2      69005227        rs28627149      C       T       .       PASS    AA=C;DP=122     GT:GQ:DP        0|1:100:31      1|1:48:17       0|1:100:73
+3      122087440       rs9875347       C       T       .       PASS    AA=N;DP=118     GT:GQ:DP        0|1:100:31      1|1:50:29       0|1:100:58
+4      26919732        rs2309559       T       C       .       PASS    AA=T;DP=107     GT:GQ:DP        0|1:100:31      1|1:51:18       0|1:100:58
+1      233787067       rs291354        G       C       .       PASS    AA=C;DP=111     GT:GQ:DP        0|1:100:31      1|1:51:18       0|1:100:63
+17     69226951        rs9904069       T       C       .       PASS    AA=T;DP=122     GT:GQ:DP        0|1:100:31      1|1:51:18       0|1:100:75
+8      16099214        rs351577        C       G       .       PASS    AA=G;DP=109     GT:GQ:DP        0|1:100:31      1|1:51:19       0|1:100:60
+2      29719679        rs11127233      C       T       .       PASS    AA=T;DP=146     GT:GQ:DP        0|1:100:31      1|1:52:30       0|1:100:85
+11     25951504        rs328479        G       C       .       PASS    AA=c;DP=114     GT:GQ:DP        0|1:100:31      1|1:54:19       0|1:100:64
+3      41029154        rs2217080       A       C       .       PASS    AA=C;DP=122     GT:GQ:DP        0|1:100:31      1|1:54:19       0|1:100:66
+1      26507487        rs6598957       C       T       .       PASS    AA=T;DP=152;HM2;HM3     GT:GQ:DP        0|1:100:31      1|1:54:20       0|1:100:54
+20     13050237        rs13042895      C       T       .       PASS    AA=C;DP=133     GT:GQ:DP        0|1:100:31      1|1:54:20       0|1:100:86
+9      91402494        rs1475536       T       C       .       PASS    AA=C;DP=152     GT:GQ:DP        0|1:100:31      1|1:57:20       0|1:100:101
+7      144811944       rs6971406       T       A       .       PASS    AA=A;DP=124     GT:GQ:DP        0|1:100:31      1|1:57:20       0|1:100:57
+9      81567334        rs970373        T       C       .       PASS    AA=C;DP=130     GT:GQ:DP        0|1:100:31      1|1:57:21       0|1:100:79
+10     12819446        rs6602616       G       A       .       PASS    AA=G;DP=133     GT:GQ:DP        0|1:100:31      1|1:58:26       0|1:100:69
+13     46518957        rs9562700       A       G       .       PASS    AA=A;DP=136     GT:GQ:DP        0|1:100:31      1|1:60:21       0|1:100:43
+5      100060833       rs2725105       G       C       .       PASS    AA=G;DP=124     GT:GQ:DP        0|1:100:31      1|1:63:23       0|1:100:71
+7      149981872       rs10256456      T       G       .       PASS    AA=T;DP=140     GT:GQ:DP        0|1:100:31      1|1:63:28       0|1:100:81
+15     31324151        rs2048660       G       A       .       PASS    AA=G;DP=138     GT:GQ:DP        0|1:100:31      1|1:64:30       0|1:100:77
+1      96929923        rs61789528      G       A       .       PASS    AA=G;DP=135     GT:GQ:DP        0|1:100:31      1|1:65:29       0|1:100:72
+11     16219450        rs1837096       C       T       .       PASS    AA=C;DP=108     GT:GQ:DP        0|1:100:31      1|1:66:23       0|1:100:41
+7      90744600        rs2115651       A       C       .       PASS    AA=A;DP=111     GT:GQ:DP        0|1:100:31      1|1:66:23       0|1:100:55
+14     71678479        rs2877792       C       T       .       PASS    AA=C;DP=113     GT:GQ:DP        0|1:100:31      1|1:66:24       0|1:100:46
+4      189230736       rs12500571      C       T       .       PASS    AA=T;DP=113     GT:GQ:DP        0|1:100:31      1|1:66:25       0|1:100:55
+10     119397978       rs855993        C       A       .       PASS    AA=A;DP=128     GT:GQ:DP        0|1:100:31      1|1:69:24       0|1:100:32
+14     34181344        rs4982198       T       C       .       PASS    AA=C;DP=100     GT:GQ:DP        0|1:100:31      1|1:69:24       0|1:100:37
+8      102822758       rs7008826       C       T       .       PASS    AA=T;DP=146     GT:GQ:DP        0|1:100:31      1|1:69:24       0|1:100:93
+13     103209431       rs1360476       T       C       .       PASS    AA=T;DP=123     GT:GQ:DP        0|1:100:31      1|1:69:25       0|1:100:68
+20     11712431        rs2249353       A       G       .       PASS    AA=A;DP=127     GT:GQ:DP        0|1:100:31      1|1:69:25       0|1:100:71
+20     43855780        rs6032544       T       C       .       PASS    AA=T;DP=145     GT:GQ:DP        0|1:100:31      1|1:70:30       0|1:100:85
+4      87021687        rs2601853       C       T       .       PASS    AA=T;DP=130     GT:GQ:DP        0|1:100:31      1|1:75:26       0|1:100:75
+7      96053408        rs4317506       A       T       .       PASS    AA=T;DP=113     GT:GQ:DP        0|1:100:31      1|1:75:27       0|1:100:55
+9      104627473       rs843255        C       G       .       PASS    AA=G;DP=113     GT:GQ:DP        0|1:100:31      1|1:75:28       0|1:100:53
+3      131819887       rs59630925      A       T       .       PASS    AA=N;DP=121     GT:GQ:DP        0|1:100:31      1|1:77:33       0|1:100:56
+8      9098477 rs2409122       T       C       .       PASS    AA=C;DP=118     GT:GQ:DP        0|1:100:31      1|1:78:27       0|1:100:60
+16     59370002        rs985975        T       C       .       PASS    AA=T;DP=130     GT:GQ:DP        0|1:100:31      1|1:78:27       0|1:100:75
+13     32525022        rs9527021       A       G       .       PASS    AA=G;DP=143     GT:GQ:DP        0|1:100:31      1|1:78:29       0|1:100:85
+2      161829341       rs1267057       C       T       .       PASS    AA=T;DP=127     GT:GQ:DP        0|1:100:31      1|1:81:29       0|1:100:65
+6      127587185       rs9375492       T       C       .       PASS    AA=C;DP=136     GT:GQ:DP        0|1:100:31      1|1:81:31       0|1:100:72
+12     128510501       rs7485852       G       A       .       PASS    AA=A;DP=135     GT:GQ:DP        0|1:100:31      1|1:84:31       0|1:100:72
+2      175480473       rs10165395      T       A       .       PASS    AA=A;DP=121     GT:GQ:DP        0|1:100:31      1|1:87:31       0|1:100:59
+1      219996479       rs4617402       G       C       .       PASS    AA=C;DP=158;HM2;HM3     GT:GQ:DP        0|1:100:31      1|1:87:42       0|1:100:85
+7      7298240 rs11981351      T       C       .       PASS    AA=T;DP=139     GT:GQ:DP        0|1:100:31      1|1:90:31       0|1:100:74
+3      97394659        rs4857184       T       C       .       PASS    AA=T;DP=113     GT:GQ:DP        0|1:100:32      0|0:100:32      0|0:100:50
+1      223247214       rs12072713      A       C       .       PASS    AA=A;DP=130     GT:GQ:DP        0|1:100:32      0|0:100:32      0|0:100:64
+13     60805385        .       C       T       .       PASS    AA=C;DP=119     GT:GQ:DP        0|1:100:32      0|0:100:33      0|0:100:54
+18     32691549        .       A       G       .       PASS    AA=A;DP=134     GT:GQ:DP        0|1:100:32      0|0:100:33      0|0:100:71
+2      19569128        rs34619733      C       G       .       PASS    AA=C;DP=136     GT:GQ:DP        0|1:100:32      0|0:100:33      0|0:100:71
+3      58625034        rs12489751      G       A       .       PASS    AA=g;DP=156     GT:GQ:DP        0|1:100:32      0|0:100:33      0|0:100:91
+2      128731834       rs60835949      C       G       .       PASS    AA=C;DP=147     GT:GQ:DP        0|1:100:32      0|0:100:34      0|0:100:35
+8      31858766        .       A       C       .       PASS    AA=A;DP=177     GT:GQ:DP        0|1:100:32      0|0:100:34      0|0:100:57
+4      12944248        rs11931876      G       C       .       PASS    AA=G;DP=139     GT:GQ:DP        0|1:100:32      0|0:100:34      0|0:100:75
+10     133485788       .       G       A       .       PASS    AA=G;DP=123     GT:GQ:DP        0|1:100:32      0|0:100:35      0|0:100:46
+7      143480932       rs1635899       G       C       .       PASS    AA=.;DP=130     GT:GQ:DP        0|1:100:32      0|0:100:35      0|0:100:65
+2      42270007        rs17670415      C       T       .       PASS    AA=C;DP=133     GT:GQ:DP        0|1:100:32      0|0:100:35      0|0:100:66
+13     76884404        rs9574049       C       T       .       PASS    AA=T;DP=138     GT:GQ:DP        0|1:100:32      0|0:100:35      0|0:100:73
+2      206994128       rs11903628      A       G       .       PASS    AA=A;DP=135     GT:GQ:DP        0|1:100:32      0|0:100:36      0|0:100:66
+2      6170183 .       A       G       .       PASS    AA=A;DP=150     GT:GQ:DP        0|1:100:32      0|0:100:37      0|0:100:42
+1      90129616        .       G       A       .       PASS    AA=G;DP=146     GT:GQ:DP        0|1:100:32      0|0:100:37      0|0:100:71
+18     48906344        rs8083977       T       C       .       PASS    AA=C;DP=156     GT:GQ:DP        0|1:100:32      0|0:100:37      0|0:100:87
+7      50502707        .       G       T       .       PASS    AA=G;DP=161     GT:GQ:DP        0|1:100:32      0|0:100:38      0|0:100:51
+2      59599147        rs2041720       T       C       .       PASS    AA=T;DP=160     GT:GQ:DP        0|1:100:32      0|0:100:38      0|0:100:89
+4      125671514       .       C       G       .       PASS    AA=C;DP=150     GT:GQ:DP        0|1:100:32      0|0:100:40      0|0:100:81
+3      125712192       rs556031        C       T       .       PASS    AA=C;DP=162     GT:GQ:DP        0|1:100:32      0|0:100:46      0|0:100:83
+2      10293771        .       C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        0|1:100:32      0|0:13:12       0|0:100:65
+12     52755860        rs12310961      A       G       .       PASS    AA=A;DP=129     GT:GQ:DP        0|1:100:32      0|0:15:15       0|0:100:85
+6      17053082        rs4248902       G       T       .       PASS    AA=G;DP=124     GT:GQ:DP        0|1:100:32      0|0:25:19       0|0:100:75
+11     70827504        rs1792265       C       T       .       PASS    AA=C;DP=133     GT:GQ:DP        0|1:100:32      0|0:26:14       0|0:100:89
+3      158210751       rs1842840       T       G       .       PASS    AA=G;DP=131     GT:GQ:DP        0|1:100:32      0|0:27:18       0|0:100:40
+22     46098457        .       A       G       .       PASS    AA=G;DP=98      GT:GQ:DP        0|1:100:32      0|0:27:18       0|0:100:48
+1      242571940       rs497436        G       A       .       PASS    AA=G;DP=168;HM2;HM3     GT:GQ:DP        0|1:100:32      0|0:29:19       0|0:100:59
+15     36714349        rs12899220      C       A       .       PASS    AA=C;DP=133     GT:GQ:DP        0|1:100:32      0|0:29:19       0|0:100:82
+18     52610373        .       C       T       .       PASS    AA=C;DP=99      GT:GQ:DP        0|1:100:32      0|0:29:8        0|0:100:60
+1      229230115       .       T       C       .       PASS    AA=t;DP=118     GT:GQ:DP        0|1:100:32      0|0:34:19       0|0:100:66
+21     44883975        rs2838606       G       A       .       PASS    AA=G;DP=106     GT:GQ:DP        0|1:100:32      0|0:35:10       0|0:100:51
+4      152200767       .       G       A       .       PASS    AA=g;DP=88      GT:GQ:DP        0|1:100:32      0|0:35:10       0|0:93:31
+1      204831145       .       T       C       .       PASS    AA=T;DP=144     GT:GQ:DP        0|1:100:32      0|0:35:20       0|0:100:92
+19     34578346        rs16962828      G       T       .       PASS    AA=G;DP=131     GT:GQ:DP        0|1:100:32      0|0:36:18       0|0:100:80
+6      66399797        .       C       A       .       PASS    AA=C;DP=120     GT:GQ:DP        0|1:100:32      0|0:36:20       0|0:100:69
+1      242551750       rs10803197      C       T       .       PASS    AA=T;DP=143;HM2 GT:GQ:DP        0|1:100:32      0|0:37:18       0|0:100:92
+6      44775783        .       C       A       .       PASS    AA=C;DP=115     GT:GQ:DP        0|1:100:32      0|0:37:21       0|0:100:62
+2      235180363       .       A       T       .       PASS    AA=G;DP=134     GT:GQ:DP        0|1:100:32      0|0:37:22       0|0:100:84
+19     42170551        rs1644673       G       A       .       PASS    AA=A;DP=126     GT:GQ:DP        0|1:100:32      0|0:37:23       0|0:100:71
+11     3189529 .       C       A       .       PASS    AA=c;DP=122     GT:GQ:DP        0|1:100:32      0|0:37:24       0|0:100:66
+10     131546152       rs4751139       G       A       .       PASS    AA=G;DP=129     GT:GQ:DP        0|1:100:32      0|0:38:11       0|0:100:84
+2      54917636        rs60303883      G       A       .       PASS    AA=G;DP=102     GT:GQ:DP        0|1:100:32      0|0:38:12       0|0:100:54
+11     47714470        .       C       T       .       PASS    AA=-;DP=100     GT:GQ:DP        0|1:100:32      0|0:38:12       0|0:100:57
+17     3656061 rs17763420      T       G       .       PASS    AA=T;DP=141     GT:GQ:DP        0|1:100:32      0|0:38:18       0|0:100:55
+6      72803554        rs6906605       G       A       .       PASS    AA=G;DP=111     GT:GQ:DP        0|1:100:32      0|0:38:18       0|0:100:59
+9      78767836        rs1929540       C       T       .       PASS    AA=C;DP=119     GT:GQ:DP        0|1:100:32      0|0:38:22       0|0:100:65
+5      150338652       rs11950220      C       A       .       PASS    AA=C;DP=139     GT:GQ:DP        0|1:100:32      0|0:38:26       0|0:100:82
+8      57876282        .       G       A       .       PASS    AA=G;DP=124     GT:GQ:DP        0|1:100:32      0|0:39:17       0|0:100:79
+1      91859899        .       A       G       .       PASS    AA=A;DP=130     GT:GQ:DP        0|1:100:32      0|0:39:22       0|0:100:76
+9      126655816       rs3814131       A       G       .       PASS    AA=a;DP=129     GT:GQ:DP        0|1:100:32      0|0:41:12       0|0:100:45
+17     51766507        rs11657999      C       T       .       PASS    AA=T;DP=95      GT:GQ:DP        0|1:100:32      0|0:41:12       0|0:100:54
+7      94308349        .       C       G       .       PASS    AA=C;DP=99      GT:GQ:DP        0|1:100:32      0|0:41:14       0|0:100:54
+1      160585122       rs347272        A       G       .       PASS    AA=G;DP=130;HM2 GT:GQ:DP        0|1:100:32      0|0:41:23       0|0:100:72
+1      244481027       rs10924625      T       C       .       PASS    AA=T;DP=130;HM2 GT:GQ:DP        0|1:100:32      0|0:41:23       0|0:96:32
+11     45896424        .       A       C       .       PASS    AA=A;DP=154     GT:GQ:DP        0|1:100:32      0|0:43:24       0|0:100:55
+20     39467654        rs41459246      G       A       .       PASS    AA=G;DP=98      GT:GQ:DP        0|1:100:32      0|0:44:13       0|0:100:53
+8      3302154 rs55747738      C       T       .       PASS    AA=C;DP=119     GT:GQ:DP        0|1:100:32      0|0:44:13       0|0:100:71
+22     43370791        rs6006828       G       A       .       PASS    AA=g;DP=97      GT:GQ:DP        0|1:100:32      0|0:44:14       0|0:100:39
+5      79167940        rs12522427      T       C       .       PASS    AA=T;DP=94      GT:GQ:DP        0|1:100:32      0|0:44:14       0|0:100:48
+3      123765173       rs6805448       C       G       .       PASS    AA=C;DP=111     GT:GQ:DP        0|1:100:32      0|0:44:14       0|0:100:65
+5      8021188 rs6889013       T       C       .       PASS    AA=C;DP=117     GT:GQ:DP        0|1:100:32      0|0:44:14       0|0:100:71
+10     35391043        .       T       G       .       PASS    AA=T;DP=120     GT:GQ:DP        0|1:100:32      0|0:44:19       0|0:100:68
+16     57443904        rs9932541       C       G       .       PASS    AA=C;DP=140     GT:GQ:DP        0|1:100:32      0|0:44:22       0|0:100:88
+20     43774147        rs58747252      A       C       .       PASS    AA=A;DP=104     GT:GQ:DP        0|1:100:32      0|0:46:25       0|0:100:47
+2      168576384       .       T       G       .       PASS    AA=T;DP=122     GT:GQ:DP        0|1:100:32      0|0:47:14       0|0:100:37
+2      71929725        rs10198802      T       C       .       PASS    AA=T;DP=110     GT:GQ:DP        0|1:100:32      0|0:47:14       0|0:100:62
+7      133643402       rs2544219       T       C       .       PASS    AA=T;DP=119     GT:GQ:DP        0|1:100:32      0|0:47:14       0|0:100:73
+12     114526498       rs11835151      A       G       .       PASS    AA=N;DP=116     GT:GQ:DP        0|1:100:32      0|0:47:14       0|0:100:74
+18     72816736        rs28457847      G       A       .       PASS    AA=G;DP=121     GT:GQ:DP        0|1:100:32      0|0:47:14       0|0:100:74
+11     94460775        .       G       A       .       PASS    AA=G;DP=123     GT:GQ:DP        0|1:100:32      0|0:47:14       0|0:100:84
+5      136406812       rs11242364      T       C       .       PASS    AA=T;DP=146     GT:GQ:DP        0|1:100:32      0|0:47:14       0|0:100:90
+2      70892279        .       A       T       .       PASS    AA=A;DP=136     GT:GQ:DP        0|1:100:32      0|0:47:15       0|0:100:44
+1      3343820 .       T       C       .       PASS    AA=T;DP=126     GT:GQ:DP        0|1:100:32      0|0:47:15       0|0:100:78
+7      47058235        rs10260932      C       G       .       PASS    AA=c;DP=118     GT:GQ:DP        0|1:100:32      0|0:47:16       0|0:100:67
+10     9433682 rs12269024      C       T       .       PASS    AA=C;DP=146     GT:GQ:DP        0|1:100:32      0|0:49:21       0|0:100:93
+12     100472411       .       A       G       .       PASS    AA=A;DP=130     GT:GQ:DP        0|1:100:32      0|0:49:21       0|0:93:37
+5      165946558       .       C       T       .       PASS    AA=C;DP=128     GT:GQ:DP        0|1:100:32      0|0:49:26       0|0:100:54
+8      26649697        rs4732842       G       A       .       PASS    AA=A;DP=124     GT:GQ:DP        0|1:100:32      0|0:49:26       0|0:100:65
+7      152822705       .       C       G       .       PASS    AA=C;DP=133     GT:GQ:DP        0|1:100:32      0|0:49:26       0|0:100:74
+1      242296873       rs12065306      G       T       .       PASS    AA=G;DP=143     GT:GQ:DP        0|1:100:32      0|0:49:26       0|0:100:82
+9      71265185        rs11138764      T       C       .       PASS    AA=T;DP=120     GT:GQ:DP        0|1:100:32      0|0:50:15       0|0:100:73
+22     42024717        rs17003630      A       G       .       PASS    AA=A;DP=133     GT:GQ:DP        0|1:100:32      0|0:50:15       0|0:100:85
+7      23503119        .       A       G       .       PASS    AA=A;DP=122     GT:GQ:DP        0|1:100:32      0|0:50:16       0|0:100:73
+20     56096733        rs6015192       G       A       .       PASS    AA=A;DP=126     GT:GQ:DP        0|1:100:32      0|0:50:16       0|0:100:77
+12     5216202 .       G       A       .       PASS    AA=G;DP=137     GT:GQ:DP        0|1:100:32      0|0:50:16       0|0:100:91
+6      150339366       .       G       A       .       PASS    AA=G;DP=143     GT:GQ:DP        0|1:100:32      0|0:50:17       0|0:100:95
+13     79044880        .       C       T       .       PASS    AA=C;DP=144     GT:GQ:DP        0|1:100:32      0|0:51:21       0|0:95:48
+2      26482367        rs10184950      G       C       .       PASS    AA=G;DP=131     GT:GQ:DP        0|1:100:32      0|0:52:19       0|0:100:40
+7      150363108       .       C       T       .       PASS    AA=C;DP=142     GT:GQ:DP        0|1:100:32      0|0:52:26       0|0:100:43
+4      80610416        .       G       A       .       PASS    AA=A;DP=113     GT:GQ:DP        0|1:100:32      0|0:52:27       0|0:100:55
+4      166275957       rs55651121      C       A       .       PASS    AA=A;DP=128     GT:GQ:DP        0|1:100:32      0|0:52:29       0|0:100:69
+19     55189595        .       C       T       .       PASS    AA=C;DP=143     GT:GQ:DP        0|1:100:32      0|0:53:16       0|0:100:53
+14     101094911       rs8011440       C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        0|1:100:32      0|0:53:16       0|0:100:61
+6      170562534       .       A       G       .       PASS    AA=A;DP=128     GT:GQ:DP        0|1:100:32      0|0:53:16       0|0:100:68
+1      201511837       rs2494302       A       G       .       PASS    AA=G;DP=129;HM2;HM3     GT:GQ:DP        0|1:100:32      0|0:53:16       0|0:100:82
+16     81581085        .       C       G       .       PASS    AA=C;DP=127     GT:GQ:DP        0|1:100:32      0|0:53:16       0|0:100:82
+5      153039078       rs4077374       T       C       .       PASS    AA=C;DP=137     GT:GQ:DP        0|1:100:32      0|0:53:16       0|0:100:88
+4      105244081       .       A       G       .       PASS    AA=A;DP=94      GT:GQ:DP        0|1:100:32      0|0:53:17       0|0:100:34
+1      198313067       rs2737654       T       G       .       PASS    AA=G;DP=94;HM2  GT:GQ:DP        0|1:100:32      0|0:53:17       0|0:100:44
+2      217243601       rs11897329      A       G       .       PASS    AA=G;DP=104     GT:GQ:DP        0|1:100:32      0|0:53:17       0|0:100:54
+11     32731947        .       T       G       .       PASS    AA=T;DP=103     GT:GQ:DP        0|1:100:32      0|0:53:17       0|0:100:55
+9      12654529        .       G       A       .       PASS    AA=N;DP=121     GT:GQ:DP        0|1:100:32      0|0:53:17       0|0:100:74
+6      81185337        rs6919256       T       C       .       PASS    AA=C;DP=128     GT:GQ:DP        0|1:100:32      0|0:53:17       0|0:100:80
+17     35161946        .       A       G       .       PASS    AA=A;DP=129     GT:GQ:DP        0|1:100:32      0|0:53:17       0|0:100:81
+7      109917182       rs925153        G       C       .       PASS    AA=G;DP=116     GT:GQ:DP        0|1:100:32      0|0:53:18       0|0:100:67
+1      118059849       rs10801982      C       G       .       PASS    AA=G;DP=117;HM2;HM3     GT:GQ:DP        0|1:100:32      0|0:53:21       0|0:100:66
+11     113366841       .       T       C       .       PASS    AA=T;DP=108     GT:GQ:DP        0|1:100:32      0|0:56:17       0|0:100:60
+1      66478559        rs12032117      G       A       .       PASS    AA=g;DP=112;HM2;HM3     GT:GQ:DP        0|1:100:32      0|0:56:17       0|0:100:65
+5      135809386       rs436810        C       T       .       PASS    AA=C;DP=122     GT:GQ:DP        0|1:100:32      0|0:56:17       0|0:100:68
+17     76007276        .       A       G       .       PASS    AA=A;DP=122     GT:GQ:DP        0|1:100:32      0|0:56:17       0|0:100:70
+16     87863995        .       C       G       .       PASS    AA=C;DP=125     GT:GQ:DP        0|1:100:32      0|0:56:17       0|0:100:76
+6      5651110 .       C       T       .       PASS    AA=C;DP=138     GT:GQ:DP        0|1:100:32      0|0:56:17       0|0:90:30
+20     4792291 rs11907979      C       T       .       PASS    AA=C;DP=123     GT:GQ:DP        0|1:100:32      0|0:56:18       0|0:100:73
+19     54102732        rs10415881      G       A       .       PASS    AA=G;DP=130     GT:GQ:DP        0|1:100:32      0|0:56:18       0|0:100:81
+5      1241285 rs11133665      G       A       .       PASS    AA=G;DP=120     GT:GQ:DP        0|1:100:32      0|0:56:19       0|0:100:70
+10     13660349        .       A       C       .       PASS    AA=A;DP=125     GT:GQ:DP        0|1:100:32      0|0:56:19       0|0:100:75
+16     70585721        rs35697801      T       C       .       PASS    AA=C;DP=135     GT:GQ:DP        0|1:100:32      0|0:56:19       0|0:100:85
+20     59743754        .       G       A       .       PASS    AA=G;DP=176     GT:GQ:DP        0|1:100:32      0|0:56:21       0|0:100:61
+16     47156018        rs1120276       C       G       .       PASS    AA=C;DP=93      GT:GQ:DP        0|1:100:32      0|0:56:23       0|0:81:27
+7      121315389       rs1949784       A       G       .       PASS    AA=A;DP=122     GT:GQ:DP        0|1:100:32      0|0:57:23       0|0:100:66
+2      21699615        .       C       T       .       PASS    AA=C;DP=106     GT:GQ:DP        0|1:100:32      0|0:59:18       0|0:100:57
+7      20442416        rs11979531      T       G       .       PASS    AA=T;DP=121     GT:GQ:DP        0|1:100:32      0|0:59:18       0|0:100:73
+1      199747714       .       G       T       .       PASS    AA=G;DP=127     GT:GQ:DP        0|1:100:32      0|0:59:18       0|0:100:78
+11     85971523        .       C       T       .       PASS    AA=C;DP=105     GT:GQ:DP        0|1:100:32      0|0:59:19       0|0:100:56
+2      86080787        .       C       G       .       PASS    AA=C;DP=115     GT:GQ:DP        0|1:100:32      0|0:59:19       0|0:100:63
+8      8195096 rs10095612      G       A       .       PASS    AA=A;DP=135     GT:GQ:DP        0|1:100:32      0|0:59:19       0|0:100:83
+2      121966708       .       A       G       .       PASS    AA=A;DP=103     GT:GQ:DP        0|1:100:32      0|0:59:27       0|0:100:44
+3      135595128       .       T       G       .       PASS    AA=T;DP=149     GT:GQ:DP        0|1:100:32      0|0:59:27       0|0:100:92
+2      165897724       rs4566378       A       C       .       PASS    AA=A;DP=125     GT:GQ:DP        0|1:100:32      0|0:60:26       0|0:100:68
+21     28981402        .       T       C       .       PASS    AA=T;DP=109     GT:GQ:DP        0|1:100:32      0|0:62:19       0|0:100:41
+5      93789140        .       A       G       .       PASS    AA=A;DP=99      GT:GQ:DP        0|1:100:32      0|0:62:19       0|0:100:50
+8      82333673        rs57999769      G       A       .       PASS    AA=N;DP=146     GT:GQ:DP        0|1:100:32      0|0:62:19       0|0:100:56
+8      76100508        rs10091982      A       C       .       PASS    AA=A;DP=115     GT:GQ:DP        0|1:100:32      0|0:62:19       0|0:100:65
+1      165622839       .       T       A       .       PASS    AA=T;DP=118     GT:GQ:DP        0|1:100:32      0|0:62:19       0|0:100:70
+22     39148959        .       T       C       .       PASS    AA=C;DP=131     GT:GQ:DP        0|1:100:32      0|0:62:19       0|0:100:79
+18     10329942        rs56220705      C       T       .       PASS    AA=C;DP=141     GT:GQ:DP        0|1:100:32      0|0:62:19       0|0:100:94
+12     11097023        .       T       C       .       PASS    AA=-;DP=111     GT:GQ:DP        0|1:100:32      0|0:62:19       0|0:23:59
+14     96777735        rs10450952      C       T       .       PASS    AA=C;DP=93      GT:GQ:DP        0|1:100:32      0|0:62:20       0|0:100:40
+2      143502229       .       G       A       .       PASS    AA=G;DP=95      GT:GQ:DP        0|1:100:32      0|0:62:20       0|0:100:42
+4      169544675       rs4692925       A       T       .       PASS    AA=A;DP=125     GT:GQ:DP        0|1:100:32      0|0:62:20       0|0:100:73
+9      131552279       rs1965820       A       G       .       PASS    AA=A;DP=132     GT:GQ:DP        0|1:100:32      0|0:62:20       0|0:100:80
+21     42950846        rs58129915      T       A       .       PASS    AA=T;DP=134     GT:GQ:DP        0|1:100:32      0|0:62:20       0|0:100:82
+2      73796618        rs4852978       G       A       .       PASS    AA=A;DP=113     GT:GQ:DP        0|1:100:32      0|0:62:22       0|0:100:59
+16     75981629        .       T       A       .       PASS    AA=T;DP=125     GT:GQ:DP        0|1:100:32      0|0:62:22       0|0:100:74
+4      9925840 .       A       G       .       PASS    AA=A;DP=153     GT:GQ:DP        0|1:100:32      0|0:63:24       0|0:100:57
+2      202514883       rs6725131       A       G       .       PASS    AA=G;DP=141     GT:GQ:DP        0|1:100:32      0|0:63:25       0|0:100:44
+4      151934582       rs58510318      T       C       .       PASS    AA=T;DP=118     GT:GQ:DP        0|1:100:32      0|0:63:25       0|0:100:55
+8      27887806        rs2685393       C       T       .       PASS    AA=C;DP=119     GT:GQ:DP        0|1:100:32      0|0:63:25       0|0:100:62
+5      71414585        rs58223246      G       A       .       PASS    AA=G;DP=141     GT:GQ:DP        0|1:100:32      0|0:63:29       0|0:100:82
+15     82330428        rs4842920       G       T       .       PASS    AA=G;DP=129     GT:GQ:DP        0|1:100:32      0|0:64:26       0|0:99:33
+7      17955357        .       T       C       .       PASS    AA=T;DP=103     GT:GQ:DP        0|1:100:32      0|0:65:20       0|0:100:39
+5      102130961       rs258140        A       G       .       PASS    AA=G;DP=101     GT:GQ:DP        0|1:100:32      0|0:65:20       0|0:100:49
+1      59752066        .       A       C       .       PASS    AA=A;DP=109     GT:GQ:DP        0|1:100:32      0|0:65:20       0|0:100:57
+11     24967176        rs1446192       G       A       .       PASS    AA=G;DP=117     GT:GQ:DP        0|1:100:32      0|0:65:20       0|0:100:64
+12     46176409        .       T       G       .       PASS    AA=.;DP=122     GT:GQ:DP        0|1:100:32      0|0:65:20       0|0:100:69
+17     68018633        .       T       C       .       PASS    AA=T;DP=142     GT:GQ:DP        0|1:100:32      0|0:65:20       0|0:79:35
+11     104159580       rs12288571      A       G       .       PASS    AA=A;DP=108     GT:GQ:DP        0|1:100:32      0|0:65:21       0|0:100:55
+5      55377253        .       A       G       .       PASS    AA=A;DP=114     GT:GQ:DP        0|1:100:32      0|0:65:21       0|0:100:62
+8      2297720 rs7812885       T       G       .       PASS    AA=G;DP=125     GT:GQ:DP        0|1:100:32      0|0:65:21       0|0:100:70
+4      5667156 rs4350953       G       C       .       PASS    AA=G;DP=130     GT:GQ:DP        0|1:100:32      0|0:65:22       0|0:100:77
+21     42191940        rs172637        G       C       .       PASS    AA=C;DP=133     GT:GQ:DP        0|1:100:32      0|0:65:22       0|0:100:80
+6      138284048       .       G       A       .       PASS    AA=G;DP=137     GT:GQ:DP        0|1:100:32      0|0:65:22       0|0:100:84
+2      46724863        .       T       A       .       PASS    AA=T;DP=104     GT:GQ:DP        0|1:100:32      0|0:65:22       0|0:85:40
+3      144933104       .       A       T       .       PASS    AA=A;DP=148     GT:GQ:DP        0|1:100:32      0|0:66:29       0|0:100:90
+9      122005398       .       A       T       .       PASS    AA=A;DP=114     GT:GQ:DP        0|1:100:32      0|0:68:21       0|0:100:49
+5      19666653        rs1562389       A       T       .       PASS    AA=T;DP=107     GT:GQ:DP        0|1:100:32      0|0:68:21       0|0:100:54
+2      224611102       .       A       G       .       PASS    AA=A;DP=122     GT:GQ:DP        0|1:100:32      0|0:68:21       0|0:100:69
+2      56540430        rs1465363       A       G       .       PASS    AA=A;DP=123     GT:GQ:DP        0|1:100:32      0|0:68:21       0|0:100:71
+10     127633589       rs11244719      G       A       .       PASS    AA=A;DP=125     GT:GQ:DP        0|1:100:32      0|0:68:21       0|0:100:74
+13     35475167        .       C       T       .       PASS    AA=C;DP=146     GT:GQ:DP        0|1:100:32      0|0:68:21       0|0:100:79
+9      84545567        rs62579135      T       C       .       PASS    AA=T;DP=132     GT:GQ:DP        0|1:100:32      0|0:68:21       0|0:100:81
+4      92576042        .       A       T       .       PASS    AA=A;DP=103     GT:GQ:DP        0|1:100:32      0|0:68:22       0|0:100:51
+14     40110340        rs7140181       C       T       .       PASS    AA=c;DP=106     GT:GQ:DP        0|1:100:32      0|0:68:22       0|0:100:52
+5      58131319        rs1878198       T       A       .       PASS    AA=T;DP=110     GT:GQ:DP        0|1:100:32      0|0:68:22       0|0:100:55
+20     45665476        rs59952410      C       T       .       PASS    AA=C;DP=144     GT:GQ:DP        0|1:100:32      0|0:68:22       0|0:100:93
+10     25636901        .       C       A       .       PASS    AA=C;DP=129     GT:GQ:DP        0|1:100:32      0|0:68:22       0|0:84:28
+8      119118067       .       T       C       .       PASS    AA=T;DP=120     GT:GQ:DP        0|1:100:32      0|0:68:23       0|0:100:66
+5      159880539       rs11953703      T       C       .       PASS    AA=T;DP=120     GT:GQ:DP        0|1:100:32      0|0:68:23       0|0:100:67
+16     13303342        rs17176658      A       G       .       PASS    AA=A;DP=133     GT:GQ:DP        0|1:100:32      0|0:68:27       0|0:100:72
+1      121058604       rs4002393       G       A       .       PASS    AA=.;DP=154     GT:GQ:DP        0|1:100:32      0|0:70:27       0|0:100:95
+3      85815895        rs6549048       G       A       .       PASS    AA=G;DP=136     GT:GQ:DP        0|1:100:32      0|0:71:22       0|0:100:41
+22     35538026        .       A       C       .       PASS    AA=a;DP=146     GT:GQ:DP        0|1:100:32      0|0:71:22       0|0:100:49
+8      24056389        .       A       T       .       PASS    AA=A;DP=102     GT:GQ:DP        0|1:100:32      0|0:71:22       0|0:100:50
+13     46143291        rs7325736       C       G       .       PASS    AA=C;DP=168     GT:GQ:DP        0|1:100:32      0|0:71:22       0|0:100:58
+8      20155606        rs10101253      A       G       .       PASS    AA=A;DP=129     GT:GQ:DP        0|1:100:32      0|0:71:22       0|0:100:76
+10     132179717       rs7097018       T       G       .       PASS    AA=T;DP=135     GT:GQ:DP        0|1:100:32      0|0:71:22       0|0:100:82
+21     25747436        rs2829750       G       A       .       PASS    AA=G;DP=140     GT:GQ:DP        0|1:100:32      0|0:71:22       0|0:100:87
+12     68141761        rs17106609      G       T       .       PASS    AA=G;DP=133     GT:GQ:DP        0|1:100:32      0|0:71:22       0|0:99:37
+2      152950425       rs4664106       A       G       .       PASS    AA=A;DP=148     GT:GQ:DP        0|1:100:32      0|0:71:23       0|0:100:52
+12     47350513        rs7295138       T       C       .       PASS    AA=T;DP=117     GT:GQ:DP        0|1:100:32      0|0:71:23       0|0:100:61
+2      57228850        rs10170212      C       T       .       PASS    AA=C;DP=118     GT:GQ:DP        0|1:100:32      0|0:71:23       0|0:100:65
+13     106686499       rs7321102       C       T       .       PASS    AA=C;DP=128     GT:GQ:DP        0|1:100:32      0|0:71:23       0|0:100:68
+1      197575845       rs2118023       C       T       .       PASS    AA=c;DP=124     GT:GQ:DP        0|1:100:32      0|0:71:23       0|0:100:70
+2      119550630       rs58549156      T       C       .       PASS    AA=C;DP=128     GT:GQ:DP        0|1:100:32      0|0:71:23       0|0:100:73
+7      32259651        rs28670858      G       A       .       PASS    AA=G;DP=131     GT:GQ:DP        0|1:100:32      0|0:71:23       0|0:100:79
+22     32300003        .       G       A       .       PASS    AA=G;DP=137     GT:GQ:DP        0|1:100:32      0|0:71:25       0|0:100:81
+14     76109982        rs7161218       C       T       .       PASS    AA=C;DP=136     GT:GQ:DP        0|1:100:32      0|0:71:26       0|0:100:79
+11     128334245       .       G       A       .       PASS    AA=A;DP=175     GT:GQ:DP        0|1:100:32      0|0:72:25       0|0:100:65
+3      6914827 .       G       T       .       PASS    AA=G;DP=142     GT:GQ:DP        0|1:100:32      0|0:72:30       0|0:100:79
+9      118764274       rs16934121      T       C       .       PASS    AA=T;DP=177     GT:GQ:DP        0|1:100:32      0|0:72:34       0|0:100:64
+5      111433471       rs154118        G       T       .       PASS    AA=G;DP=147     GT:GQ:DP        0|1:100:32      0|0:74:23       0|0:100:43
+7      91501202        rs13231578      C       T       .       PASS    AA=T;DP=150     GT:GQ:DP        0|1:100:32      0|0:74:23       0|0:100:44
+10     32290406        .       C       T       .       PASS    AA=C;DP=132     GT:GQ:DP        0|1:100:32      0|0:74:23       0|0:100:66
+16     73917336        rs9932982       C       T       .       PASS    AA=C;DP=121     GT:GQ:DP        0|1:100:32      0|0:74:23       0|0:100:67
+7      45281678        rs10232948      A       T       .       PASS    AA=A;DP=133     GT:GQ:DP        0|1:100:32      0|0:74:23       0|0:100:71
+7      88234441        rs2519945       C       T       .       PASS    AA=c;DP=125     GT:GQ:DP        0|1:100:32      0|0:74:23       0|0:100:71
+1      80155797        rs12118831      A       T       .       PASS    AA=A;DP=127;HM2 GT:GQ:DP        0|1:100:32      0|0:74:23       0|0:100:73
+18     36970002        .       C       T       .       PASS    AA=C;DP=128     GT:GQ:DP        0|1:100:32      0|0:74:23       0|0:100:73
+15     40367433        rs8037051       G       A       .       PASS    AA=G;DP=104     GT:GQ:DP        0|1:100:32      0|0:74:24       0|0:100:48
+4      26120326        .       G       A       .       PASS    AA=G;DP=118     GT:GQ:DP        0|1:100:32      0|0:74:24       0|0:100:60
+21     41055187        .       C       T       .       PASS    AA=c;DP=114     GT:GQ:DP        0|1:100:32      0|0:74:27       0|0:100:55
+9      135150132       rs62574609      T       C       .       PASS    AA=t;DP=145     GT:GQ:DP        0|1:100:32      0|0:75:31       0|0:100:84
+17     28397147        .       C       A       .       PASS    AA=C;DP=145     GT:GQ:DP        0|1:100:32      0|0:76:34       0|0:100:80
+3      55659438        rs9847625       C       T       .       PASS    AA=C;DP=152     GT:GQ:DP        0|1:100:32      0|0:77:24       0|0:100:54
+21     31548342        .       C       T       .       PASS    AA=C;DP=158     GT:GQ:DP        0|1:100:32      0|0:77:24       0|0:100:60
+1      238443478       .       T       C       .       PASS    AA=T;DP=119     GT:GQ:DP        0|1:100:32      0|0:77:24       0|0:100:62
+3      194070696       .       C       G       .       PASS    AA=C;DP=124     GT:GQ:DP        0|1:100:32      0|0:77:24       0|0:100:66
+2      80614696        .       A       G       .       PASS    AA=A;DP=124     GT:GQ:DP        0|1:100:32      0|0:77:24       0|0:100:68
+19     46812204        .       T       C       .       PASS    AA=A;DP=127     GT:GQ:DP        0|1:100:32      0|0:77:24       0|0:100:72
+3      195146952       rs62286553      C       T       .       PASS    AA=T;DP=129     GT:GQ:DP        0|1:100:32      0|0:77:24       0|0:100:72
+15     42338790        .       T       C       .       PASS    AA=T;DP=120     GT:GQ:DP        0|1:100:32      0|0:77:25       0|0:100:63
+11     86975873        .       C       T       .       PASS    AA=C;DP=147     GT:GQ:DP        0|1:100:32      0|0:77:26       0|0:100:47
+9      74146611        rs7862866       G       A       .       PASS    AA=G;DP=148     GT:GQ:DP        0|1:100:32      0|0:77:26       0|0:100:50
+3      63031007        .       C       T       .       PASS    AA=C;DP=141     GT:GQ:DP        0|1:100:32      0|0:77:26       0|0:100:83
+10     79021636        rs7076508       C       T       .       PASS    AA=C;DP=165     GT:GQ:DP        0|1:100:32      0|0:77:27       0|0:100:105
+11     121657439       rs7106545       G       A       .       PASS    AA=A;DP=120     GT:GQ:DP        0|1:100:32      0|0:77:31       0|0:100:56
+9      37703729        rs16934420      G       A       .       PASS    AA=G;DP=147     GT:GQ:DP        0|1:100:32      0|0:79:30       0|0:100:47
+1      229620966       rs1538667       T       C       .       PASS    AA=C;DP=137;HM2 GT:GQ:DP        0|1:100:32      0|0:79:33       0|0:100:71
+12     114352012       .       G       A       .       PASS    AA=G;DP=146     GT:GQ:DP        0|1:100:32      0|0:80:25       0|0:100:43
+10     23729021        rs883851        T       C       .       PASS    AA=C;DP=161     GT:GQ:DP        0|1:100:32      0|0:80:25       0|0:100:54
+4      147741410       .       C       A       .       PASS    AA=C;DP=153     GT:GQ:DP        0|1:100:32      0|0:80:25       0|0:100:56
+5      122554565       rs629818        T       G       .       PASS    AA=T;DP=126     GT:GQ:DP        0|1:100:32      0|0:80:25       0|0:100:67
+4      138332014       .       C       G       .       PASS    AA=C;DP=127     GT:GQ:DP        0|1:100:32      0|0:80:25       0|0:100:74
+12     111148796       .       A       G       .       PASS    AA=A;DP=134     GT:GQ:DP        0|1:100:32      0|0:80:25       0|0:100:75
+12     128247273       rs55747504      A       G       .       PASS    AA=A;DP=131     GT:GQ:DP        0|1:100:32      0|0:80:25       0|0:100:76
+5      98481479        .       T       A       .       PASS    AA=T;DP=135     GT:GQ:DP        0|1:100:32      0|0:80:25       0|0:100:77
+8      137466507       .       C       G       .       PASS    AA=G;DP=133     GT:GQ:DP        0|1:100:32      0|0:80:25       0|0:100:78
+2      217022186       rs284554        A       G       .       PASS    AA=A;DP=137     GT:GQ:DP        0|1:100:32      0|0:80:25       0|0:100:80
+1      95237965        .       C       A       .       PASS    AA=C;DP=142     GT:GQ:DP        0|1:100:32      0|0:80:25       0|0:100:84
+2      106315974       rs4234115       A       C       .       PASS    AA=.;DP=159     GT:GQ:DP        0|1:100:32      0|0:80:26       0|0:100:47
+9      696479  rs7019865       T       C       .       PASS    AA=T;DP=115     GT:GQ:DP        0|1:100:32      0|0:80:26       0|0:100:57
+2      113310219       rs3917348       G       A       .       PASS    AA=G;DP=128     GT:GQ:DP        0|1:100:32      0|0:80:26       0|0:100:68
+7      8626726 .       A       G       .       PASS    AA=A;DP=134     GT:GQ:DP        0|1:100:32      0|0:80:26       0|0:100:71
+17     6151747 rs7217252       A       G       .       PASS    AA=A;DP=131     GT:GQ:DP        0|1:100:32      0|0:80:27       0|0:100:72
+1      231590518       rs4649223       G       C       .       PASS    AA=G;DP=145     GT:GQ:DP        0|1:100:32      0|0:80:29       0|0:100:87
+21     27102040        rs2067899       C       A       .       PASS    AA=C;DP=143     GT:GQ:DP        0|1:100:32      0|0:80:31       0|0:100:36
+3      145346470       .       T       C       .       PASS    AA=T;DP=126     GT:GQ:DP        0|1:100:32      0|0:80:31       0|0:100:65
+17     1557412 .       C       T       .       PASS    AA=C;DP=132     GT:GQ:DP        0|1:100:32      0|0:82:30       0|0:100:70
+2      5164188 rs10929849      G       A       .       PASS    AA=A;DP=134     GT:GQ:DP        0|1:100:32      0|0:82:33       0|0:100:67
+2      146038902       rs876903        A       T       .       PASS    AA=A;DP=105     GT:GQ:DP        0|1:100:32      0|0:83:26       0|0:100:48
+4      141401037       .       A       G       .       PASS    AA=A;DP=157     GT:GQ:DP        0|1:100:32      0|0:83:26       0|0:100:48
+13     73861587        rs1931932       C       T       .       PASS    AA=T;DP=126     GT:GQ:DP        0|1:100:32      0|0:83:26       0|0:100:68
+2      200158543       .       C       T       .       PASS    AA=C;DP=129     GT:GQ:DP        0|1:100:32      0|0:83:26       0|0:100:71
+8      95012791        rs3115900       G       A       .       PASS    AA=G;DP=127     GT:GQ:DP        0|1:100:32      0|0:83:27       0|0:100:68
+14     97886459        rs11624474      G       A       .       PASS    AA=G;DP=145     GT:GQ:DP        0|1:100:32      0|0:83:27       0|0:100:90
+2      159786542       rs2357057       C       T       .       PASS    AA=C;DP=137     GT:GQ:DP        0|1:100:32      0|0:83:28       0|0:100:77
+13     101531180       .       A       T       .       PASS    AA=A;DP=148     GT:GQ:DP        0|1:100:32      0|0:84:38       0|0:100:79
+1      238239930       .       G       T       .       PASS    AA=G;DP=157     GT:GQ:DP        0|1:100:32      0|0:86:27       0|0:100:53
+2      40434954        rs6738580       A       G       .       PASS    AA=A;DP=117     GT:GQ:DP        0|1:100:32      0|0:86:27       0|0:100:60
+9      116830496       .       G       A       .       PASS    AA=G;DP=125     GT:GQ:DP        0|1:100:32      0|0:86:27       0|0:100:62
+1      101190762       .       A       G       .       PASS    AA=A;DP=126     GT:GQ:DP        0|1:100:32      0|0:86:27       0|0:100:71
+13     21777141        rs7334810       G       T       .       PASS    AA=G;DP=131     GT:GQ:DP        0|1:100:32      0|0:86:27       0|0:100:73
+15     88810196        rs2074583       T       C       .       PASS    AA=C;DP=142     GT:GQ:DP        0|1:100:32      0|0:86:27       0|0:100:83
+8      101455200       rs62518263      T       C       .       PASS    AA=T;DP=122     GT:GQ:DP        0|1:100:32      0|0:86:28       0|0:100:64
+8      10296525        rs4292737       A       G       .       PASS    AA=N;DP=156     GT:GQ:DP        0|1:100:32      0|0:86:28       0|0:100:94
+12     99775596        .       T       C       .       PASS    AA=T;DP=132     GT:GQ:DP        0|1:100:32      0|0:86:29       0|0:100:72
+8      55463338        .       T       C       .       PASS    AA=T;DP=123     GT:GQ:DP        0|1:100:32      0|0:86:39       0|0:100:55
+18     65479412        rs28591677      C       T       .       PASS    AA=c;DP=150     GT:GQ:DP        0|1:100:32      0|0:88:37       0|0:100:80
+10     25714704        rs1773617       C       T       .       PASS    AA=T;DP=106     GT:GQ:DP        0|1:100:32      0|0:89:28       0|0:100:50
+3      143337786       .       T       C       .       PASS    AA=T;DP=129     GT:GQ:DP        0|1:100:32      0|0:89:28       0|0:100:68
+1      198951784       .       A       G       .       PASS    AA=A;DP=134     GT:GQ:DP        0|1:100:32      0|0:89:28       0|0:100:72
+10     78664434        rs12782077      C       T       .       PASS    AA=C;DP=130     GT:GQ:DP        0|1:100:32      0|0:89:28       0|0:68:34
+5      75222652        .       T       C       .       PASS    AA=C;DP=161     GT:GQ:DP        0|1:100:32      0|0:89:29       0|0:100:54
+11     129928515       rs2172491       C       T       .       PASS    AA=C;DP=135     GT:GQ:DP        0|1:100:32      0|0:89:29       0|0:100:76
+6      125843191       .       G       A       .       PASS    AA=G;DP=136     GT:GQ:DP        0|1:100:32      0|0:89:29       0|0:100:78
+6      11789180        rs9469826       A       C       .       PASS    AA=C;DP=140     GT:GQ:DP        0|1:100:32      0|0:89:29       0|0:100:80
+8      109989994       rs6995143       C       T       .       PASS    AA=C;DP=125     GT:GQ:DP        0|1:100:32      0|0:92:29       0|0:100:66
+10     7410022 rs12263191      A       G       .       PASS    AA=A;DP=136     GT:GQ:DP        0|1:100:32      0|0:92:29       0|0:100:78
+13     108524566       rs1367657       T       C       .       PASS    AA=C;DP=113     GT:GQ:DP        0|1:100:32      0|0:92:30       0|0:100:38
+1      230778768       rs1285678       A       G       .       PASS    AA=G;DP=114;HM2 GT:GQ:DP        0|1:100:32      0|0:92:30       0|0:100:39
+1      217300715       .       G       A       .       PASS    AA=G;DP=122     GT:GQ:DP        0|1:100:32      0|0:92:30       0|0:100:61
+15     32684306        rs4537985       A       G       .       PASS    AA=g;DP=137     GT:GQ:DP        0|1:100:32      0|0:92:30       0|0:100:75
+18     8010899 .       G       A       .       PASS    AA=G;DP=142     GT:GQ:DP        0|1:100:32      0|0:92:30       0|0:100:80
+12     19499661        rs16915302      A       C       .       PASS    AA=A;DP=163     GT:GQ:DP        0|1:100:32      0|0:95:30       0|0:100:49
+8      123580546       .       G       A       .       PASS    AA=G;DP=123     GT:GQ:DP        0|1:100:32      0|0:95:30       0|0:100:62
+4      42359220        rs28363903      G       T       .       PASS    AA=G;DP=131     GT:GQ:DP        0|1:100:32      0|0:95:30       0|0:100:67
+6      85433100        rs9450002       C       T       .       PASS    AA=T;DP=156     GT:GQ:DP        0|1:100:32      0|0:95:31       0|0:100:44
+18     31330480        rs12965597      T       C       .       PASS    AA=T;DP=149     GT:GQ:DP        0|1:100:32      0|0:95:31       0|0:100:85
+16     12612338        .       G       A       .       PASS    AA=G;DP=149     GT:GQ:DP        0|1:100:32      0|0:95:31       0|0:100:89
+7      24706378        .       A       G       .       PASS    AA=A;DP=125     GT:GQ:DP        0|1:100:32      0|0:95:32       0|0:100:61
+7      7942642 rs56929156      G       A       .       PASS    AA=G;DP=148     GT:GQ:DP        0|1:100:32      0|0:98:31       0|0:100:87
+5      161794362       rs13183570      C       T       .       PASS    AA=C;DP=138     GT:GQ:DP        0|1:100:32      0|0:98:32       0|0:100:70
+12     48949653        rs10783347      G       A       .       PASS    AA=G;DP=130     GT:GQ:DP        0|1:100:32      0|1:100:16      0|0:100:37
+12     36879252        .       C       T       .       PASS    AA=a;DP=125     GT:GQ:DP        0|1:100:32      0|1:100:16      0|0:100:78
+5      16388004        .       G       A       .       PASS    AA=A;DP=138     GT:GQ:DP        0|1:100:32      0|1:100:19      0|0:100:43
+3      98592898        rs16838605      C       T       .       PASS    AA=C;DP=111     GT:GQ:DP        0|1:100:32      0|1:100:19      0|0:100:56
+3      175578172       rs2090714       T       C       .       PASS    AA=N;DP=123     GT:GQ:DP        0|1:100:32      0|1:100:19      0|0:100:72
+11     117546312       rs10892222      G       A       .       PASS    AA=G;DP=129     GT:GQ:DP        0|1:100:32      0|1:100:19      0|0:100:78
+1      20609451        rs12131811      C       A       .       PASS    AA=C;DP=99      GT:GQ:DP        0|1:100:32      0|1:100:20      0|0:100:46
+17     73761277        rs11657271      A       T       .       PASS    AA=A;DP=120     GT:GQ:DP        0|1:100:32      0|1:100:20      0|0:100:68
+4      135012331       .       A       G       .       PASS    AA=A;DP=120     GT:GQ:DP        0|1:100:32      0|1:100:20      0|0:100:70
+5      118053590       rs12659643      G       A       .       PASS    AA=g;DP=129     GT:GQ:DP        0|1:100:32      0|1:100:20      0|0:100:77
+9      114174242       rs4979107       T       C       .       PASS    AA=T;DP=132     GT:GQ:DP        0|1:100:32      0|1:100:21      0|0:100:78
+4      149280777       rs6833880       T       A       .       PASS    AA=A;DP=112     GT:GQ:DP        0|1:100:32      0|1:100:22      0|0:100:47
+15     24176063        rs12441523      A       G       .       PASS    AA=A;DP=146     GT:GQ:DP        0|1:100:32      0|1:100:22      0|0:100:51
+14     70262293        rs10134929      G       A       .       PASS    AA=A;DP=132     GT:GQ:DP        0|1:100:32      0|1:100:22      0|0:100:80
+19     8539943 rs11672367      C       T       .       PASS    AA=C;DP=154     GT:GQ:DP        0|1:100:32      0|1:100:24      0|0:100:58
+16     5389791 rs580061        T       C       .       PASS    AA=T;DP=123     GT:GQ:DP        0|1:100:32      0|1:100:24      0|0:100:70
+20     42227684        rs6073354       C       T       .       PASS    AA=T;DP=128     GT:GQ:DP        0|1:100:32      0|1:100:25      0|0:100:72
+14     36068649        rs60717855      A       G       .       PASS    AA=A;DP=154     GT:GQ:DP        0|1:100:32      0|1:100:26      0|0:100:43
+4      179104814       rs10866221      T       A       .       PASS    AA=A;DP=117     GT:GQ:DP        0|1:100:32      0|1:100:26      0|0:100:59
+1      108074655       rs17541024      C       G       .       PASS    AA=C;DP=147;HM2 GT:GQ:DP        0|1:100:32      0|1:100:26      0|0:100:87
+2      234570114       rs4663999       C       T       .       PASS    AA=T;DP=152     GT:GQ:DP        0|1:100:32      0|1:100:27      0|0:100:44
+1      203707610       .       G       C       .       PASS    AA=G;DP=138     GT:GQ:DP        0|1:100:32      0|1:100:27      0|0:100:80
+2      33583316        rs17013167      T       C       .       PASS    AA=T;DP=126     GT:GQ:DP        0|1:100:32      0|1:100:28      0|0:100:66
+8      67543291        rs12265 C       A       .       PASS    AA=C;DP=153     GT:GQ:DP        0|1:100:32      0|1:100:29      0|0:100:91
+4      53497357        .       T       C       .       PASS    AA=T;DP=138     GT:GQ:DP        0|1:100:32      0|1:100:30      0|0:100:79
+2      145342140       rs16824165      G       A       .       PASS    AA=g;DP=138     GT:GQ:DP        0|1:100:32      0|1:100:31      0|0:100:77
+20     19830739        rs11699692      C       T       .       PASS    AA=C;DP=140     GT:GQ:DP        0|1:100:32      0|1:100:31      0|0:100:80
+18     70809747        rs7245105       G       T       .       PASS    AA=T;DP=151     GT:GQ:DP        0|1:100:32      0|1:100:32      0|0:100:47
+5      55484873        .       C       T       .       PASS    AA=C;DP=124     GT:GQ:DP        0|1:100:32      0|1:100:32      0|0:100:61
+13     26239212        rs1887595       G       C       .       PASS    AA=G;DP=145     GT:GQ:DP        0|1:100:32      0|1:100:33      0|0:100:84
+6      76257519        rs9360911       C       T       .       PASS    AA=C;DP=155     GT:GQ:DP        0|1:100:32      0|1:100:34      0|0:100:47
+12     41428132        rs2730995       T       C       .       PASS    AA=C;DP=153     GT:GQ:DP        0|1:100:32      0|1:100:35      0|0:100:88
+X      444669  rs6645166       A       G       .       PASS    AA=.;DP=93      GT:GQ:DP        0|1:100:32      0|1:15:20       0|0:100:36
+6      150704747       rs6940537       G       A       .       PASS    AA=g;DP=81      GT:GQ:DP        0|1:100:32      0|1:20:13       0|0:100:38
+11     30402810        rs7928159       G       A       .       PASS    AA=g;DP=102     GT:GQ:DP        0|1:100:32      0|1:3:13        0|0:100:59
+3      37687771        rs34547922      T       C       .       PASS    AA=T;DP=118     GT:GQ:DP        0|1:100:32      0|1:42:13       0|0:100:74
+6      113542165       rs2347736       G       C       .       PASS    AA=G;DP=111     GT:GQ:DP        0|1:100:32      0|1:49:19       0|0:100:61
+15     85230918        rs4480771       G       C       .       PASS    AA=G;DP=127     GT:GQ:DP        0|1:100:32      0|1:56:21       0|0:87:31
+6      1077239 .       A       G       .       PASS    AA=A;DP=128     GT:GQ:DP        0|1:100:32      0|1:59:26       0|0:100:72
+21     45200111        rs8130143       A       G       .       PASS    AA=G;DP=105     GT:GQ:DP        0|1:100:32      0|1:64:15       0|0:100:58
+5      139128102       rs356478        C       T       .       PASS    AA=C;DP=113     GT:GQ:DP        0|1:100:32      0|1:67:12       0|0:100:67
+2      187907856       .       A       G       .       PASS    AA=A;DP=120     GT:GQ:DP        0|1:100:32      0|1:68:25       0|0:100:64
+14     60292022        rs7151575       G       A       .       PASS    AA=A;DP=109     GT:GQ:DP        0|1:100:32      0|1:70:15       0|0:100:63
+6      68717754        .       T       A       .       PASS    AA=T;DP=121     GT:GQ:DP        0|1:100:32      0|1:76:19       0|0:75:27
+12     62070774        rs786860        G       A       .       PASS    AA=A;DP=104     GT:GQ:DP        0|1:100:32      0|1:76:21       0|0:100:52
+12     45402241        rs17097141      T       C       .       PASS    AA=T;DP=126     GT:GQ:DP        0|1:100:32      0|1:77:24       0|0:100:68
+20     47396942        rs16994523      G       A       .       PASS    AA=G;DP=158     GT:GQ:DP        0|1:100:32      0|1:78:28       0|0:100:54
+6      25159001        rs304257        C       T       .       PASS    AA=c;DP=127     GT:GQ:DP        0|1:100:32      0|1:82:23       0|0:100:71
+1      169588412       rs1024171       A       G       .       PASS    AA=A;DP=155     GT:GQ:DP        0|1:100:32      0|1:89:22       0|0:100:50
+5      117251785       .       A       G       .       PASS    AA=A;DP=134     GT:GQ:DP        0|1:100:32      0|1:92:20       0|0:100:82
+11     132894325       rs4131674       T       C       .       PASS    AA=T;DP=143     GT:GQ:DP        0|1:100:32      0|1:95:17       0|0:100:42
+14     85808092        rs1958525       G       A       .       PASS    AA=G;DP=133     GT:GQ:DP        0|1:100:32      0|1:97:23       0|0:100:77
+3      85975737        rs9828595       T       G       .       PASS    AA=T;DP=116     GT:GQ:DP        0|1:100:32      0|1:98:27       0|0:100:58
+5      91139391        rs2913442       G       A       .       PASS    AA=A;DP=99      GT:GQ:DP        0|1:100:32      1|1:16:21       0|1:100:47
+2      206809458       rs2359165       A       G       .       PASS    AA=G;DP=126     GT:GQ:DP        0|1:100:32      1|1:27:21       0|1:100:72
+3      43725112        rs3774790       G       A       .       PASS    AA=A;DP=128     GT:GQ:DP        0|1:100:32      1|1:30:25       0|1:100:33
+5      148444292       rs6580595       C       T       .       PASS    AA=C;DP=92      GT:GQ:DP        0|1:100:32      1|1:31:17       0|1:100:44
+13     23241924        rs9578640       A       G       .       PASS    AA=A;DP=134     GT:GQ:DP        0|1:100:32      1|1:31:23       0|1:100:78
+3      129868732       rs56141228      C       T       .       PASS    AA=T;DP=102     GT:GQ:DP        0|1:100:32      1|1:34:17       0|1:100:41
+7      107090864       rs2248465       C       T       .       PASS    AA=T;DP=112     GT:GQ:DP        0|1:100:32      1|1:35:24       0|1:100:58
+5      55082246        rs6863874       A       G       .       PASS    AA=A;DP=124     GT:GQ:DP        0|1:100:32      1|1:36:13       0|1:100:82
+12     29850412        rs11050447      T       C       .       PASS    AA=T;DP=125     GT:GQ:DP        0|1:100:32      1|1:39:15       0|1:100:56
+8      92254911        rs4259381       T       G       .       PASS    AA=N;DP=117     GT:GQ:DP        0|1:100:32      1|1:39:22       0|1:100:65
+5      57782937        rs42739 T       G       .       PASS    AA=G;DP=133     GT:GQ:DP        0|1:100:32      1|1:40:30       0|1:100:72
+4      82762101        rs4472126       T       G       .       PASS    AA=T;DP=125     GT:GQ:DP        0|1:100:32      1|1:41:21       0|1:100:71
+9      72439459        rs7039530       A       G       .       PASS    AA=A;DP=112     GT:GQ:DP        0|1:100:32      1|1:41:26       0|1:100:54
+22     46895359        rs6008558       G       A       .       PASS    AA=A;DP=130     GT:GQ:DP        0|1:100:32      1|1:42:16       0|1:100:44
+2      85517910        rs12473017      G       T       .       PASS    AA=T;DP=118     GT:GQ:DP        0|1:100:32      1|1:43:23       0|1:100:60
+10     118140003       rs12243530      A       G       .       PASS    AA=N;DP=101     GT:GQ:DP        0|1:100:32      1|1:45:17       0|1:100:52
+8      10876519        rs4458840       T       C       .       PASS    AA=T;DP=133     GT:GQ:DP        0|1:100:32      1|1:47:28       0|1:100:74
+7      41786002        rs12701935      C       A       .       PASS    AA=A;DP=137     GT:GQ:DP        0|1:100:32      1|1:47:28       0|1:100:78
+13     63561825        rs269611        C       T       .       PASS    AA=T;DP=104     GT:GQ:DP        0|1:100:32      1|1:51:18       0|1:100:55
+3      169942461       rs570339        G       A       .       PASS    AA=A;DP=105     GT:GQ:DP        0|1:100:32      1|1:51:20       0|1:100:51
+3      178330191       .       A       G       .       PASS    AA=A;DP=110     GT:GQ:DP        0|1:100:32      1|1:53:33       0|1:100:45
+14     70501785        .       G       C       .       PASS    AA=G;DP=131     GT:GQ:DP        0|1:100:32      1|1:54:19       0|1:100:69
+2      119197241       rs332099        T       C       .       PASS    AA=C;DP=122     GT:GQ:DP        0|1:100:32      1|1:54:20       0|1:100:73
+16     9098087 rs12918779      C       T       .       PASS    AA=C;DP=128     GT:GQ:DP        0|1:100:32      1|1:54:21       0|1:100:75
+15     94316606        rs3996564       A       T       .       PASS    AA=A;DP=139     GT:GQ:DP        0|1:100:32      1|1:54:22       0|1:100:88
+16     12844973        rs7404019       T       C       .       PASS    AA=C;DP=129     GT:GQ:DP        0|1:100:32      1|1:54:23       0|1:100:73
+13     42625388        rs2657099       C       T       .       PASS    AA=T;DP=131     GT:GQ:DP        0|1:100:32      1|1:55:21       0|1:100:77
+15     30734337        rs55654632      T       G       .       PASS    AA=T;DP=147     GT:GQ:DP        0|1:100:32      1|1:57:20       0|1:100:51
+8      63608657        rs896489        A       G       .       PASS    AA=G;DP=120     GT:GQ:DP        0|1:100:32      1|1:57:20       0|1:100:68
+9      81232089        rs10867385      C       G       .       PASS    AA=G;DP=128     GT:GQ:DP        0|1:100:32      1|1:57:20       0|1:100:75
+4      103250797       rs238436        G       A       .       PASS    AA=A;DP=127     GT:GQ:DP        0|1:100:32      1|1:58:32       0|1:100:63
+11     2046437 rs10840299      A       G       .       PASS    AA=.;DP=143     GT:GQ:DP        0|1:100:32      1|1:60:21       0|1:100:92
+12     62853225        rs789746        A       G       .       PASS    AA=A;DP=136     GT:GQ:DP        0|1:100:32      1|1:60:23       0|1:100:74
+4      188764633       rs2889337       A       G       .       PASS    AA=G;DP=126     GT:GQ:DP        0|1:100:32      1|1:60:24       0|1:100:70
+11     94038768        .       C       A       .       PASS    AA=C;DP=121     GT:GQ:DP        0|1:100:32      1|1:63:22       0|1:100:68
+19     61111969        rs4629084       G       T       .       PASS    AA=G;DP=131     GT:GQ:DP        0|1:100:32      1|1:63:23       0|1:100:79
+14     58535847        rs1961605       A       G       .       PASS    AA=G;DP=144     GT:GQ:DP        0|1:100:32      1|1:63:23       0|1:100:89
+20     60264695        rs6089706       G       A       .       PASS    AA=A;DP=132     GT:GQ:DP        0|1:100:32      1|1:66:23       0|1:100:76
+19     40562188        rs16970276      G       A       .       PASS    AA=G;DP=148     GT:GQ:DP        0|1:100:32      1|1:66:23       0|1:100:95
+15     90334918        rs7163369       G       A       .       PASS    AA=A;DP=126     GT:GQ:DP        0|1:100:32      1|1:66:26       0|1:100:69
+16     4772417 rs13332050      C       T       .       PASS    AA=T;DP=123     GT:GQ:DP        0|1:100:32      1|1:69:24       0|1:100:68
+15     38428739        rs1898884       T       C       .       PASS    AA=T;DP=139     GT:GQ:DP        0|1:100:32      1|1:69:24       0|1:100:85
+21     46260658        rs9983489       C       T       .       PASS    AA=T;DP=118     GT:GQ:DP        0|1:100:32      1|1:72:26       0|1:100:60
+8      68804692        rs2553677       T       C       .       PASS    AA=C;DP=119     GT:GQ:DP        0|1:100:32      1|1:72:26       0|1:100:63
+3      16070575        rs11711658      A       G       .       PASS    AA=N;DP=110     GT:GQ:DP        0|1:100:32      1|1:72:27       0|1:100:53
+7      3121613 rs12112364      T       C       .       PASS    AA=t;DP=119     GT:GQ:DP        0|1:100:32      1|1:72:27       0|1:100:60
+2      160157699       rs6714917       A       C       .       PASS    AA=A;DP=132     GT:GQ:DP        0|1:100:32      1|1:75:26       0|1:100:32
+10     112293347       rs6584992       C       A       .       PASS    AA=A;DP=145     GT:GQ:DP        0|1:100:32      1|1:75:26       0|1:100:45
+2      175374902       rs2646153       G       A       .       PASS    AA=A;DP=160     GT:GQ:DP        0|1:100:32      1|1:75:27       0|1:100:76
+3      183727847       rs1457566       G       A       .       PASS    AA=G;DP=123     GT:GQ:DP        0|1:100:32      1|1:78:27       0|1:100:64
+3      65247647        rs1383061       T       A       .       PASS    AA=A;DP=126     GT:GQ:DP        0|1:100:32      1|1:78:27       0|1:100:64
+15     87060175        rs11073806      A       T       .       PASS    AA=A;DP=135     GT:GQ:DP        0|1:100:32      1|1:78:27       0|1:100:78
+19     44198797        rs6508835       A       G       .       PASS    AA=A;DP=135     GT:GQ:DP        0|1:100:32      1|1:78:28       0|1:100:76
+7      132447684       rs17339794      T       C       .       PASS    AA=C;DP=139     GT:GQ:DP        0|1:100:32      1|1:78:28       0|1:100:80
+2      65953120        rs2553051       G       A       .       PASS    AA=A;DP=143     GT:GQ:DP        0|1:100:32      1|1:81:28       0|1:100:39
+6      85908519        rs1321735       T       C       .       PASS    AA=C;DP=139     GT:GQ:DP        0|1:100:32      1|1:81:28       0|1:100:81
+20     46106201        rs966712        T       A       .       PASS    AA=A;DP=133     GT:GQ:DP        0|1:100:32      1|1:81:29       0|1:100:73
+7      54165995        rs1524395       C       A       .       PASS    AA=A;DP=125     GT:GQ:DP        0|1:100:32      1|1:84:29       0|1:100:66
+3      27594458        rs2724521       C       T       .       PASS    AA=T;DP=135     GT:GQ:DP        0|1:100:32      1|1:84:29       0|1:100:77
+17     8271123 rs61687004      G       C       .       PASS    AA=G;DP=150     GT:GQ:DP        0|1:100:32      1|1:84:32       0|1:100:85
+8      17483639        rs2517274       T       C       .       PASS    AA=C;DP=166     GT:GQ:DP        0|1:100:32      1|1:87:30       0|1:100:47
+4      138094863       rs556850        C       T       .       PASS    AA=T;DP=142     GT:GQ:DP        0|1:100:32      1|1:90:31       0|1:100:81
+10     120135130       rs703455        C       T       .       PASS    AA=T;DP=139     GT:GQ:DP        0|1:100:32      1|1:90:33       0|1:100:75
+9      35950464        rs12378268      C       T       .       PASS    AA=-;DP=143     GT:GQ:DP        0|1:100:32      1|1:93:33       0|1:100:79
+4      79328105        rs17003036      A       G       .       PASS    AA=A;DP=162     GT:GQ:DP        0|1:100:33      0|0:100:32      0|0:100:56
+15     71642096        rs7169976       T       C       .       PASS    AA=C;DP=148     GT:GQ:DP        0|1:100:33      0|0:100:33      0|0:100:72
+8      75469689        rs10088787      A       C       .       PASS    AA=A;DP=138     GT:GQ:DP        0|1:100:33      0|0:100:33      0|0:100:73
+14     82331900        .       T       C       .       PASS    AA=T;DP=146     GT:GQ:DP        0|1:100:33      0|0:100:33      0|0:100:80
+5      59975124        rs16878304      G       A       .       PASS    AA=G;DP=148     GT:GQ:DP        0|1:100:33      0|0:100:34      0|0:100:38
+6      54867888        rs4141552       A       G       .       PASS    AA=A;DP=164     GT:GQ:DP        0|1:100:33      0|0:100:34      0|0:100:45
+5      141649783       rs7734788       T       C       .       PASS    AA=T;DP=165     GT:GQ:DP        0|1:100:33      0|0:100:34      0|0:100:49
+15     24780284        rs8032881       T       G       .       PASS    AA=T;DP=142     GT:GQ:DP        0|1:100:33      0|0:100:36      0|0:100:72
+15     69525044        rs735300        C       G       .       PASS    AA=C;DP=158     GT:GQ:DP        0|1:100:33      0|0:100:36      0|0:100:90
+4      97539633        rs34949483      T       C       .       PASS    AA=T;DP=180     GT:GQ:DP        0|1:100:33      0|0:100:37      0|0:100:104
+7      33656095        .       C       T       .       PASS    AA=C;DP=180     GT:GQ:DP        0|1:100:33      0|0:100:38      0|0:100:63
+14     20504396        .       C       T       .       PASS    AA=C;DP=176     GT:GQ:DP        0|1:100:33      0|0:100:42      0|0:100:59
+1      70481656        .       G       A       .       PASS    AA=A;DP=144     GT:GQ:DP        0|1:100:33      0|0:100:43      0|0:100:69
+4      93572086        rs62311046      A       G       .       PASS    AA=A;DP=151     GT:GQ:DP        0|1:100:33      0|0:100:43      0|0:100:72
+3      174455740       rs7645485       T       C       .       PASS    AA=T;DP=190     GT:GQ:DP        0|1:100:33      0|0:100:44      0|0:100:59
+6      32593953        rs34525481      A       G       .       PASS    AA=-;DP=115     GT:GQ:DP        0|1:100:33      0|0:26:25       0|0:20:56
+10     14422999        .       T       C       .       PASS    AA=T;DP=103     GT:GQ:DP        0|1:100:33      0|0:27:18       0|0:87:41
+10     72793777        .       G       T       .       PASS    AA=G;DP=115     GT:GQ:DP        0|1:100:33      0|0:29:19       0|0:100:62
+6      170661849       .       G       A       .       PASS    AA=G;DP=109     GT:GQ:DP        0|1:100:33      0|0:29:8        0|0:100:56
+15     73321833        rs7183224       G       A       .       PASS    AA=G;DP=136     GT:GQ:DP        0|1:100:33      0|0:32:18       0|0:100:45
+20     5452183 .       G       T       .       PASS    AA=G;DP=141     GT:GQ:DP        0|1:100:33      0|0:34:19       0|0:100:49
+17     34461223        rs11867963      G       A       .       PASS    AA=A;DP=96      GT:GQ:DP        0|1:100:33      0|0:35:10       0|0:82:39
+3      43198451        rs2372349       C       A       .       PASS    AA=C;DP=117     GT:GQ:DP        0|1:100:33      0|0:35:25       0|0:100:60
+19     10304254        rs10410977      C       A       .       PASS    AA=C;DP=125     GT:GQ:DP        0|1:100:33      0|0:37:16       0|0:100:73
+10     47094477        .       C       T       .       PASS    AA=.;DP=121     GT:GQ:DP        0|1:100:33      0|0:38:12       0|0:70:31
+6      7261955 .       T       C       .       PASS    AA=C;DP=141     GT:GQ:DP        0|1:100:33      0|0:38:22       0|0:100:45
+15     86319654        .       A       C       .       PASS    AA=A;DP=133     GT:GQ:DP        0|1:100:33      0|0:38:22       0|0:100:71
+11     132205441       rs4491241       C       A       .       PASS    AA=A;DP=125     GT:GQ:DP        0|1:100:33      0|0:38:22       0|0:100:72
+8      110152849       .       T       C       .       PASS    AA=T;DP=125     GT:GQ:DP        0|1:100:33      0|0:41:12       0|0:100:36
+22     22175271        rs12159208      G       C       .       PASS    AA=g;DP=103     GT:GQ:DP        0|1:100:33      0|0:41:12       0|0:100:58
+22     37815798        .       G       A       .       PASS    AA=G;DP=134     GT:GQ:DP        0|1:100:33      0|0:41:15       0|0:100:90
+5      157948460       .       C       T       .       PASS    AA=C;DP=121     GT:GQ:DP        0|1:100:33      0|0:41:23       0|0:100:66
+13     92851730        .       G       T       .       PASS    AA=G;DP=104     GT:GQ:DP        0|1:100:33      0|0:42:22       0|0:100:49
+2      79313085        rs13406244      T       A       .       PASS    AA=T;DP=124     GT:GQ:DP        0|1:100:33      0|0:42:24       0|0:72:24
+2      115681435       rs17355679      T       C       .       PASS    AA=t;DP=114     GT:GQ:DP        0|1:100:33      0|0:43:24       0|0:100:57
+4      79259915        rs10033428      G       T       .       PASS    AA=G;DP=129     GT:GQ:DP        0|1:100:33      0|0:43:24       0|0:100:66
+13     49300308        .       G       A       .       PASS    AA=G;DP=127     GT:GQ:DP        0|1:100:33      0|0:44:13       0|0:100:83
+7      155248775       rs11765009      G       A       .       PASS    AA=A;DP=139     GT:GQ:DP        0|1:100:33      0|0:46:18       0|0:100:86
+5      162264760       rs61482824      G       C       .       PASS    AA=G;DP=118     GT:GQ:DP        0|1:100:33      0|0:46:19       0|0:100:67
+17     39514784        .       G       A       .       PASS    AA=A;DP=125     GT:GQ:DP        0|1:100:33      0|0:47:14       0|0:90:30
+4      42654150        rs10014465      G       A       .       PASS    AA=G;DP=128     GT:GQ:DP        0|1:100:33      0|0:47:29       0|0:100:68
+1      25834856        rs12402012      C       G       .       PASS    AA=A;DP=145;HM2 GT:GQ:DP        0|1:100:33      0|0:49:26       0|0:100:47
+10     80465644        rs12569849      A       C       .       PASS    AA=A;DP=132     GT:GQ:DP        0|1:100:33      0|0:49:26       0|0:100:70
+10     127877374       rs2930123       T       A       .       PASS    AA=T;DP=110     GT:GQ:DP        0|1:100:33      0|0:50:15       0|0:100:62
+4      16975178        rs6831296       G       A       .       PASS    AA=G;DP=112     GT:GQ:DP        0|1:100:33      0|0:50:16       0|0:100:65
+2      28675745        rs59221928      C       G       .       PASS    AA=C;DP=117     GT:GQ:DP        0|1:100:33      0|0:50:16       0|0:100:67
+3      123829860       .       A       G       .       PASS    AA=A;DP=130     GT:GQ:DP        0|1:100:33      0|0:50:16       0|0:100:79
+1      234255901       rs16833131      C       T       .       PASS    AA=C;DP=134;HM2;HM3     GT:GQ:DP        0|1:100:33      0|0:50:16       0|0:100:86
+1      3067374 rs12082960      T       C       .       PASS    AA=T;DP=151;HM2 GT:GQ:DP        0|1:100:33      0|0:50:16       0|0:100:96
+16     74397975        rs55745167      C       T       .       PASS    AA=C;DP=119     GT:GQ:DP        0|1:100:33      0|0:50:18       0|0:100:66
+1      110849893       rs1290262       C       G       .       PASS    AA=G;DP=142;HM2 GT:GQ:DP        0|1:100:33      0|0:53:16       0|0:100:50
+2      238558591       rs4663275       T       C       .       PASS    AA=T;DP=114     GT:GQ:DP        0|1:100:33      0|0:53:16       0|0:100:65
+20     61369520        rs6011710       A       G       .       PASS    AA=A;DP=117     GT:GQ:DP        0|1:100:33      0|0:53:16       0|0:100:69
+20     42290690        rs16985328      C       T       .       PASS    AA=T;DP=118     GT:GQ:DP        0|1:100:33      0|0:53:16       0|0:100:71
+15     58923202        rs55878740      T       C       .       PASS    AA=C;DP=147     GT:GQ:DP        0|1:100:33      0|0:53:18       0|0:100:54
+4      38369756        .       C       T       .       PASS    AA=T;DP=121     GT:GQ:DP        0|1:100:33      0|0:53:18       0|0:100:70
+20     54898757        rs13044061      C       G       .       PASS    AA=C;DP=134     GT:GQ:DP        0|1:100:33      0|0:53:18       0|0:99:34
+18     33205613        .       T       C       .       PASS    AA=T;DP=144     GT:GQ:DP        0|1:100:33      0|0:55:24       0|0:100:49
+11     35131496        .       C       A       .       PASS    AA=C;DP=125     GT:GQ:DP        0|1:100:33      0|0:55:28       0|0:100:65
+6      47750765        rs9395306       C       G       .       PASS    AA=G;DP=142     GT:GQ:DP        0|1:100:33      0|0:55:28       0|0:100:80
+14     76833838        .       T       C       .       PASS    AA=T;DP=153     GT:GQ:DP        0|1:100:33      0|0:55:28       0|0:100:89
+9      117232809       rs55633606      C       T       .       PASS    AA=C;DP=125     GT:GQ:DP        0|1:100:33      0|0:56:17       0|0:100:74
+10     14762726        rs11259266      A       G       .       PASS    AA=A;DP=130     GT:GQ:DP        0|1:100:33      0|0:56:17       0|0:100:83
+1      167404300       .       G       A       .       PASS    AA=A;DP=110     GT:GQ:DP        0|1:100:33      0|0:56:18       0|0:100:45
+9      116950790       rs60632414      A       T       .       PASS    AA=A;DP=117     GT:GQ:DP        0|1:100:33      0|0:56:18       0|0:100:65
+9      127943708       .       C       T       .       PASS    AA=C;DP=121     GT:GQ:DP        0|1:100:33      0|0:56:18       0|0:100:69
+12     54175722        .       A       G       .       PASS    AA=A;DP=122     GT:GQ:DP        0|1:100:33      0|0:56:18       0|0:100:72
+5      156579959       rs25779 G       C       .       PASS    AA=C;DP=130     GT:GQ:DP        0|1:100:33      0|0:56:18       0|0:100:79
+6      160235233       .       C       T       .       PASS    AA=T;DP=129     GT:GQ:DP        0|1:100:33      0|0:56:18       0|0:100:80
+1      112740886       rs17030194      G       T       .       PASS    AA=G;DP=139;HM2 GT:GQ:DP        0|1:100:33      0|0:56:18       0|0:100:88
+9      36087997        .       A       G       .       PASS    AA=A;DP=124     GT:GQ:DP        0|1:100:33      0|0:56:19       0|0:100:69
+19     54025137        .       A       G       .       PASS    AA=A;DP=124     GT:GQ:DP        0|1:100:33      0|0:56:19       0|0:100:72
+9      120570778       rs2102422       T       G       .       PASS    AA=T;DP=143     GT:GQ:DP        0|1:100:33      0|0:57:26       0|0:100:43
+1      118976243       rs2659210       A       C       .       PASS    AA=-;DP=131     GT:GQ:DP        0|1:100:33      0|0:57:26       0|0:100:74
+8      5146666 rs2216312       T       C       .       PASS    AA=C;DP=122     GT:GQ:DP        0|1:100:33      0|0:58:24       0|0:100:62
+13     73120585        rs9600149       A       G       .       PASS    AA=G;DP=147     GT:GQ:DP        0|1:100:33      0|0:58:29       0|0:100:44
+1      63902278        rs2658428       G       T       .       PASS    AA=G;DP=144;HM2 GT:GQ:DP        0|1:100:33      0|0:59:18       0|0:100:56
+7      7900227 .       C       T       .       PASS    AA=T;DP=108     GT:GQ:DP        0|1:100:33      0|0:59:18       0|0:100:57
+6      155323015       rs60269205      T       C       .       PASS    AA=t;DP=108     GT:GQ:DP        0|1:100:33      0|0:59:18       0|0:100:59
+11     7630091 rs7926059       G       A       .       PASS    AA=G;DP=127     GT:GQ:DP        0|1:100:33      0|0:59:18       0|0:100:78
+6      38431567        .       T       A       .       PASS    AA=T;DP=142     GT:GQ:DP        0|1:100:33      0|0:59:19       0|0:100:46
+15     39354687        rs10152702      G       A       .       PASS    AA=g;DP=110     GT:GQ:DP        0|1:100:33      0|0:59:19       0|0:100:50
+2      54812596        rs6740110       C       G       .       PASS    AA=C;DP=116     GT:GQ:DP        0|1:100:33      0|0:59:19       0|0:100:66
+11     34952493        rs11032959      C       G       .       PASS    AA=C;DP=127     GT:GQ:DP        0|1:100:33      0|0:59:19       0|0:100:77
+9      38673660        rs4878845       A       C       .       PASS    AA=C;DP=125     GT:GQ:DP        0|1:100:33      0|0:59:21       0|0:100:73
+14     75537730        rs34482483      G       A       .       PASS    AA=G;DP=156     GT:GQ:DP        0|1:100:33      0|0:59:25       0|0:100:55
+6      31077681        rs2523911       G       A       .       PASS    AA=G;DP=127     GT:GQ:DP        0|1:100:33      0|0:60:21       0|0:100:74
+4      176012733       rs7434520       T       G       .       PASS    AA=T;DP=117     GT:GQ:DP        0|1:100:33      0|0:60:26       0|0:100:59
+5      10033355        rs58045379      C       T       .       PASS    AA=T;DP=113     GT:GQ:DP        0|1:100:33      0|0:62:19       0|0:100:45
+15     56614915        rs17301822      G       A       .       PASS    AA=A;DP=145     GT:GQ:DP        0|1:100:33      0|0:62:19       0|0:100:47
+12     69613399        .       T       A       .       PASS    AA=T;DP=112     GT:GQ:DP        0|1:100:33      0|0:62:19       0|0:100:61
+20     59026898        rs4281966       G       A       .       PASS    AA=G;DP=115     GT:GQ:DP        0|1:100:33      0|0:62:19       0|0:100:63
+14     38750084        .       G       A       .       PASS    AA=A;DP=131     GT:GQ:DP        0|1:100:33      0|0:62:19       0|0:100:77
+2      235200374       rs60802646      T       G       .       PASS    AA=N;DP=133     GT:GQ:DP        0|1:100:33      0|0:62:19       0|0:100:82
+2      121807857       .       A       G       .       PASS    AA=A;DP=143     GT:GQ:DP        0|1:100:33      0|0:62:22       0|0:100:50
+10     130377257       .       C       T       .       PASS    AA=C;DP=109     GT:GQ:DP        0|1:100:33      0|0:62:25       0|0:100:52
+2      207715748       rs1406791       A       G       .       PASS    AA=G;DP=163     GT:GQ:DP        0|1:100:33      0|0:63:31       0|0:100:56
+21     42691859        rs9325634       A       G       .       PASS    AA=A;DP=137     GT:GQ:DP        0|1:100:33      0|0:65:20       0|0:100:42
+12     104114952       rs1196744       G       C       .       PASS    AA=G;DP=133     GT:GQ:DP        0|1:100:33      0|0:65:20       0|0:100:84
+6      124753787       rs1322584       G       C       .       PASS    AA=G;DP=110     GT:GQ:DP        0|1:100:33      0|0:65:21       0|0:100:57
+16     85028098        rs11117496      A       G       .       PASS    AA=G;DP=128     GT:GQ:DP        0|1:100:33      0|0:65:21       0|0:100:72
+3      74039484        .       A       G       .       PASS    AA=A;DP=131     GT:GQ:DP        0|1:100:33      0|0:65:21       0|0:100:79
+10     73116282        rs1227089       G       T       .       PASS    AA=T;DP=137     GT:GQ:DP        0|1:100:33      0|0:65:21       0|0:100:83
+10     94663500        rs10882126      G       A       .       PASS    AA=G;DP=116     GT:GQ:DP        0|1:100:33      0|0:65:22       0|0:100:63
+1      31391353        rs6689678       T       C       .       PASS    AA=T;DP=128;HM2;HM3     GT:GQ:DP        0|1:100:33      0|0:65:23       0|0:100:72
+9      33652083        rs7846759       G       T       .       PASS    AA=g;DP=144     GT:GQ:DP        0|1:100:33      0|0:66:28       0|0:100:83
+16     58479290        rs6500071       G       A       .       PASS    AA=G;DP=136     GT:GQ:DP        0|1:100:33      0|0:67:29       0|0:100:73
+7      10897065        .       G       A       .       PASS    AA=G;DP=134     GT:GQ:DP        0|1:100:33      0|0:68:21       0|0:100:43
+10     33876382        rs2601761       T       C       .       PASS    AA=T;DP=118     GT:GQ:DP        0|1:100:33      0|0:68:21       0|0:100:63
+21     35303120        rs34937724      A       G       .       PASS    AA=A;DP=127     GT:GQ:DP        0|1:100:33      0|0:68:21       0|0:100:71
+4      151532193       rs62347038      A       G       .       PASS    AA=A;DP=127     GT:GQ:DP        0|1:100:33      0|0:68:21       0|0:100:74
+2      30988030        .       G       A       .       PASS    AA=G;DP=133     GT:GQ:DP        0|1:100:33      0|0:68:22       0|0:100:79
+4      125237272       .       A       C       .       PASS    AA=A;DP=133     GT:GQ:DP        0|1:100:33      0|0:68:23       0|0:76:37
+17     7894210 rs12449666      C       T       .       PASS    AA=C;DP=111     GT:GQ:DP        0|1:100:33      0|0:68:28       0|0:100:42
+10     50137565        rs17009638      G       A       .       PASS    AA=G;DP=122     GT:GQ:DP        0|1:100:33      0|0:71:22       0|0:100:67
+12     27209508        .       C       A       .       PASS    AA=C;DP=129     GT:GQ:DP        0|1:100:33      0|0:71:22       0|0:100:73
+12     50062972        .       T       C       .       PASS    AA=T;DP=131     GT:GQ:DP        0|1:100:33      0|0:71:22       0|0:100:78
+6      149054351       rs9498125       C       T       .       PASS    AA=C;DP=135     GT:GQ:DP        0|1:100:33      0|0:71:23       0|0:100:35
+1      244552836       .       A       G       .       PASS    AA=A;DP=115     GT:GQ:DP        0|1:100:33      0|0:71:23       0|0:100:60
+9      3021780 rs61732420      T       A       .       PASS    AA=T;DP=135     GT:GQ:DP        0|1:100:33      0|0:71:23       0|0:100:81
+1      156108669       .       G       A       .       PASS    AA=G;DP=142     GT:GQ:DP        0|1:100:33      0|0:71:23       0|0:100:89
+16     59002566        .       C       T       .       PASS    AA=C;DP=121     GT:GQ:DP        0|1:100:33      0|0:71:24       0|0:100:65
+4      56494907        rs7672094       T       A       .       PASS    AA=T;DP=135     GT:GQ:DP        0|1:100:33      0|0:71:24       0|0:100:79
+7      127309339       .       C       G       .       PASS    AA=C;DP=127     GT:GQ:DP        0|1:100:33      0|0:71:25       0|0:100:65
+11     34360979        rs16925443      T       C       .       PASS    AA=A;DP=136     GT:GQ:DP        0|1:100:33      0|0:74:23       0|0:100:39
+2      23588089        .       G       C       .       PASS    AA=G;DP=141     GT:GQ:DP        0|1:100:33      0|0:74:23       0|0:100:41
+2      61782624        rs4074481       A       C       .       PASS    AA=C;DP=114     GT:GQ:DP        0|1:100:33      0|0:74:23       0|0:100:56
+6      102394669       .       T       G       .       PASS    AA=T;DP=111     GT:GQ:DP        0|1:100:33      0|0:74:23       0|0:100:60
+16     20673700        .       G       C       .       PASS    AA=G;DP=166     GT:GQ:DP        0|1:100:33      0|0:74:23       0|0:100:63
+3      56328145        rs55839257      G       A       .       PASS    AA=G;DP=121     GT:GQ:DP        0|1:100:33      0|0:74:23       0|0:100:66
+2      8513047 .       G       A       .       PASS    AA=G;DP=124     GT:GQ:DP        0|1:100:33      0|0:74:23       0|0:100:68
+3      112317278       .       A       C       .       PASS    AA=A;DP=125     GT:GQ:DP        0|1:100:33      0|0:74:23       0|0:100:69
+14     51601067        rs3783455       A       T       .       PASS    AA=A;DP=128     GT:GQ:DP        0|1:100:33      0|0:74:23       0|0:100:72
+8      130994319       .       T       G       .       PASS    AA=T;DP=131     GT:GQ:DP        0|1:100:33      0|0:74:23       0|0:100:74
+11     120786583       .       A       G       .       PASS    AA=A;DP=134     GT:GQ:DP        0|1:100:33      0|0:74:23       0|0:100:79
+9      99995451        .       G       C       .       PASS    AA=C;DP=157     GT:GQ:DP        0|1:100:33      0|0:74:24       0|0:100:54
+21     25497146        .       G       A       .       PASS    AA=A;DP=111     GT:GQ:DP        0|1:100:33      0|0:74:25       0|0:100:59
+16     69227514        rs8055567       C       T       .       PASS    AA=C;DP=145     GT:GQ:DP        0|1:100:33      0|0:74:25       0|0:100:90
+1      93972254        rs17110370      C       T       .       PASS    AA=C;DP=150;HM2;HM3     GT:GQ:DP        0|1:100:33      0|0:77:24       0|0:100:43
+7      37178669        rs34464565      T       C       .       PASS    AA=T;DP=123     GT:GQ:DP        0|1:100:33      0|0:77:24       0|0:100:66
+9      4643500 rs6476881       A       C       .       PASS    AA=A;DP=130     GT:GQ:DP        0|1:100:33      0|0:77:24       0|0:100:70
+16     27055564        rs13333362      C       T       .       PASS    AA=C;DP=134     GT:GQ:DP        0|1:100:33      0|0:77:24       0|0:100:80
+11     93894382        .       G       A       .       PASS    AA=g;DP=138     GT:GQ:DP        0|1:100:33      0|0:77:24       0|0:100:83
+6      6480322 rs1761938       A       G       .       PASS    AA=G;DP=140     GT:GQ:DP        0|1:100:33      0|0:77:25       0|0:100:41
+17     64036350        .       C       T       .       PASS    AA=C;DP=128     GT:GQ:DP        0|1:100:33      0|0:77:25       0|0:100:70
+18     71208485        rs7232416       G       T       .       PASS    AA=G;DP=135     GT:GQ:DP        0|1:100:33      0|0:77:25       0|0:100:78
+15     46897773        rs4774523       C       T       .       PASS    AA=C;DP=148     GT:GQ:DP        0|1:100:33      0|0:77:25       0|0:100:89
+1      167443214       rs1080266       T       C       .       PASS    AA=C;DP=134;HM2 GT:GQ:DP        0|1:100:33      0|0:77:26       0|0:100:77
+19     35976693        .       C       T       .       PASS    AA=C;DP=131     GT:GQ:DP        0|1:100:33      0|0:77:28       0|0:100:72
+13     94748859        rs1539068       G       T       .       PASS    AA=G;DP=168     GT:GQ:DP        0|1:100:33      0|0:77:31       0|0:100:51
+10     99829724        .       A       T       .       PASS    AA=A;DP=160     GT:GQ:DP        0|1:100:33      0|0:77:31       0|0:100:53
+6      85764939        rs1322865       G       A       .       PASS    AA=A;DP=133     GT:GQ:DP        0|1:100:33      0|0:77:31       0|0:100:68
+10     113531609       .       T       C       .       PASS    AA=C;DP=136     GT:GQ:DP        0|1:100:33      0|0:78:32       0|0:100:73
+19     46758396        rs4803481       A       G       .       PASS    AA=-;DP=119     GT:GQ:DP        0|1:100:33      0|0:80:25       0|0:100:63
+1      71803870        rs6668345       G       C       .       PASS    AA=G;DP=126;HM2 GT:GQ:DP        0|1:100:33      0|0:80:25       0|0:100:68
+1      3983506 rs59428740      A       G       .       PASS    AA=A;DP=129     GT:GQ:DP        0|1:100:33      0|0:80:25       0|0:100:72
+5      86686959        .       C       T       .       PASS    AA=C;DP=141     GT:GQ:DP        0|1:100:33      0|0:80:26       0|0:100:43
+12     39708094        rs278908        C       G       .       PASS    AA=C;DP=114     GT:GQ:DP        0|1:100:33      0|0:80:26       0|0:100:44
+15     96594462        .       C       G       .       PASS    AA=C;DP=107     GT:GQ:DP        0|1:100:33      0|0:80:26       0|0:100:48
+6      81109608        .       T       C       .       PASS    AA=T;DP=156     GT:GQ:DP        0|1:100:33      0|0:80:26       0|0:100:48
+2      40103498        .       C       T       .       PASS    AA=C;DP=117     GT:GQ:DP        0|1:100:33      0|0:80:26       0|0:100:58
+8      19006824        rs10088192      C       T       .       PASS    AA=T;DP=118     GT:GQ:DP        0|1:100:33      0|0:80:26       0|0:100:59
+3      47518063        rs6791384       C       A       .       PASS    AA=C;DP=170     GT:GQ:DP        0|1:100:33      0|0:80:27       0|0:100:112
+10     13150696        rs7893877       G       A       .       PASS    AA=G;DP=136     GT:GQ:DP        0|1:100:33      0|0:82:31       0|0:100:72
+4      184441228       rs3814419       G       A       .       PASS    AA=G;DP=108     GT:GQ:DP        0|1:100:33      0|0:83:26       0|0:100:48
+18     47213728        rs13381827      A       G       .       PASS    AA=A;DP=136     GT:GQ:DP        0|1:100:33      0|0:83:26       0|0:100:79
+3      37237126        .       G       A       .       PASS    AA=G;DP=156     GT:GQ:DP        0|1:100:33      0|0:83:27       0|0:100:54
+15     34864288        .       T       C       .       PASS    AA=T;DP=129     GT:GQ:DP        0|1:100:33      0|0:83:27       0|0:100:71
+16     13102550        .       G       A       .       PASS    AA=G;DP=157     GT:GQ:DP        0|1:100:33      0|0:83:30       0|0:100:81
+8      58594383        .       G       A       .       PASS    AA=G;DP=146     GT:GQ:DP        0|1:100:33      0|0:83:32       0|0:100:43
+1      20179158        rs11573152      C       T       .       PASS    AA=C;DP=162;HM2;HM3     GT:GQ:DP        0|1:100:33      0|0:86:27       0|0:100:46
+3      55048719        rs9841508       T       C       .       PASS    AA=T;DP=134     GT:GQ:DP        0|1:100:33      0|0:86:27       0|0:100:74
+6      137818960       rs6570163       A       G       .       PASS    AA=G;DP=142     GT:GQ:DP        0|1:100:33      0|0:86:27       0|0:91:40
+12     14532878        .       A       G       .       PASS    AA=a;DP=140     GT:GQ:DP        0|1:100:33      0|0:86:28       0|0:100:46
+8      102558211       rs508148        G       A       .       PASS    AA=A;DP=151     GT:GQ:DP        0|1:100:33      0|0:86:28       0|0:100:79
+6      152326129       rs11962704      C       T       .       PASS    AA=C;DP=131     GT:GQ:DP        0|1:100:33      0|0:86:29       0|0:100:69
+20     54478603        rs7271450       A       G       .       PASS    AA=A;DP=161     GT:GQ:DP        0|1:100:33      0|0:89:28       0|0:100:48
+1      188198356       rs1341976       T       C       .       PASS    AA=C;DP=126;HM2 GT:GQ:DP        0|1:100:33      0|0:89:28       0|0:100:65
+1      42445959        .       T       C       .       PASS    AA=T;DP=133     GT:GQ:DP        0|1:100:33      0|0:89:28       0|0:100:72
+9      92077429        .       G       A       .       PASS    AA=G;DP=137     GT:GQ:DP        0|1:100:33      0|0:89:28       0|0:100:77
+8      8972316 .       A       G       .       PASS    AA=A;DP=149     GT:GQ:DP        0|1:100:33      0|0:89:28       0|0:100:89
+11     120542764       rs615697        T       C       .       PASS    AA=T;DP=161     GT:GQ:DP        0|1:100:33      0|0:89:29       0|0:100:51
+2      177122978       rs2922333       T       C       .       PASS    AA=T;DP=145     GT:GQ:DP        0|1:100:33      0|0:89:29       0|0:100:83
+15     91948257        rs17709306      C       T       .       PASS    AA=T;DP=132     GT:GQ:DP        0|1:100:33      0|0:89:30       0|0:100:63
+3      4549631 rs6766061       G       C       .       PASS    AA=A;DP=142     GT:GQ:DP        0|1:100:33      0|0:89:31       0|0:100:80
+13     111978762       rs56690381      T       C       .       PASS    AA=-;DP=119     GT:GQ:DP        0|1:100:33      0|0:92:29       0|0:100:58
+8      140651544       rs2542452       C       A       .       PASS    AA=A;DP=121     GT:GQ:DP        0|1:100:33      0|0:92:29       0|0:100:58
+10     14054541        .       C       G       .       PASS    AA=C;DP=129     GT:GQ:DP        0|1:100:33      0|0:92:29       0|0:100:66
+13     91622294        .       G       T       .       PASS    AA=G;DP=154     GT:GQ:DP        0|1:100:33      0|0:92:29       0|0:100:82
+7      3791109 .       C       G       .       PASS    AA=C;DP=156     GT:GQ:DP        0|1:100:33      0|0:92:34       0|0:100:43
+5      95235690        .       T       C       .       PASS    AA=T;DP=132     GT:GQ:DP        0|1:100:33      0|0:95:30       0|0:100:66
+12     9866059 .       C       T       .       PASS    AA=C;DP=151     GT:GQ:DP        0|1:100:33      0|0:95:30       0|0:100:82
+7      90937491        rs10271147      T       C       .       PASS    AA=T;DP=143     GT:GQ:DP        0|1:100:33      0|0:95:30       0|0:100:83
+15     91609567        rs11634643      T       C       .       PASS    AA=T;DP=153     GT:GQ:DP        0|1:100:33      0|0:95:30       0|0:100:88
+8      5636679 .       G       A       .       PASS    AA=G;DP=156     GT:GQ:DP        0|1:100:33      0|0:95:31       0|0:100:50
+9      99239394        rs4742692       A       G       .       PASS    AA=G;DP=162     GT:GQ:DP        0|1:100:33      0|0:95:32       0|0:100:97
+21     16215805        rs9974791       G       A       .       PASS    AA=G;DP=126     GT:GQ:DP        0|1:100:33      0|0:95:33       0|0:100:59
+11     116352372       rs12275589      G       A       .       PASS    AA=G;DP=150     GT:GQ:DP        0|1:100:33      0|0:97:37       0|0:100:85
+13     73568605        .       T       G       .       PASS    AA=T;DP=140     GT:GQ:DP        0|1:100:33      0|0:98:31       0|0:100:64
+4      83598850        rs11929894      T       C       .       PASS    AA=T;DP=140     GT:GQ:DP        0|1:100:33      0|0:98:31       0|0:100:79
+12     46959396        rs34524121      G       A       .       PASS    AA=G;DP=129     GT:GQ:DP        0|1:100:33      0|0:98:32       0|0:100:61
+15     27715837        .       G       A       .       PASS    AA=G;DP=117     GT:GQ:DP        0|1:100:33      0|1:100:17      0|0:100:68
+2      68192930        rs1375373       C       G       .       PASS    AA=a;DP=155     GT:GQ:DP        0|1:100:33      0|1:100:19      0|0:100:52
+9      33603042        rs1811907       A       G       .       PASS    AA=a;DP=146     GT:GQ:DP        0|1:100:33      0|1:100:20      0|0:100:39
+1      173438608       rs760490        C       T       .       PASS    AA=c;DP=143     GT:GQ:DP        0|1:100:33      0|1:100:20      0|0:100:43
+6      164096990       rs9356141       C       T       .       PASS    AA=C;DP=128     GT:GQ:DP        0|1:100:33      0|1:100:21      0|0:100:77
+7      10326939        rs4725269       G       T       .       PASS    AA=T;DP=143     GT:GQ:DP        0|1:100:33      0|1:100:21      0|0:100:90
+10     57021670        rs4427481       A       C       .       PASS    AA=A;DP=94      GT:GQ:DP        0|1:100:33      0|1:100:21      0|0:78:27
+15     36074277        rs7167724       C       A       .       PASS    AA=C;DP=137     GT:GQ:DP        0|1:100:33      0|1:100:22      0|0:100:83
+19     35377347        rs10418548      G       A       .       PASS    AA=G;DP=115     GT:GQ:DP        0|1:100:33      0|1:100:23      0|0:100:61
+3      9358597 rs3888097       C       T       .       PASS    AA=C;DP=123     GT:GQ:DP        0|1:100:33      0|1:100:23      0|0:100:66
+16     71548321        rs7197208       G       C       .       PASS    AA=G;DP=141     GT:GQ:DP        0|1:100:33      0|1:100:23      0|0:100:86
+4      5316059 rs2062795       G       T       .       PASS    AA=G;DP=145     GT:GQ:DP        0|1:100:33      0|1:100:23      0|0:100:91
+15     56103229        rs8041300       T       C       .       PASS    AA=T;DP=137     GT:GQ:DP        0|1:100:33      0|1:100:24      0|0:100:35
+14     75699886        rs2591092       G       A       .       PASS    AA=A;DP=146     GT:GQ:DP        0|1:100:33      0|1:100:24      0|0:100:88
+1      228430915       rs11122472      G       A       .       PASS    AA=G;DP=141;HM2 GT:GQ:DP        0|1:100:33      0|1:100:25      0|0:100:43
+17     31177533        rs28595279      G       T       .       PASS    AA=T;DP=123     GT:GQ:DP        0|1:100:33      0|1:100:25      0|0:100:64
+4      76231880        rs4464630       C       T       .       PASS    AA=T;DP=147     GT:GQ:DP        0|1:100:33      0|1:100:25      0|0:100:76
+15     48142973        .       T       G       .       PASS    AA=T;DP=116     GT:GQ:DP        0|1:100:33      0|1:100:26      0|0:100:58
+11     35009065        rs2785160       T       C       .       PASS    AA=T;DP=163     GT:GQ:DP        0|1:100:33      0|1:100:26      0|0:100:63
+12     67011218        rs3741808       G       T       .       PASS    AA=T;DP=123     GT:GQ:DP        0|1:100:33      0|1:100:26      0|0:100:64
+10     117623571       rs2960658       G       A       .       PASS    AA=A;DP=127     GT:GQ:DP        0|1:100:33      0|1:100:28      0|0:100:61
+6      161268263       rs62436935      T       C       .       PASS    AA=T;DP=135     GT:GQ:DP        0|1:100:33      0|1:100:28      0|0:100:76
+14     47332346        .       A       T       .       PASS    AA=A;DP=102     GT:GQ:DP        0|1:100:33      0|1:100:29      0|0:100:39
+7      134340625       rs4236652       G       A       .       PASS    AA=G;DP=130     GT:GQ:DP        0|1:100:33      0|1:100:29      0|0:100:67
+13     24316589        rs58308348      A       G       .       PASS    AA=A;DP=131     GT:GQ:DP        0|1:100:33      0|1:100:29      0|0:100:74
+12     91280117        rs19266 C       T       .       PASS    AA=T;DP=137     GT:GQ:DP        0|1:100:33      0|1:100:30      0|0:100:71
+6      103979049       rs7749998       C       T       .       PASS    AA=C;DP=141     GT:GQ:DP        0|1:100:33      0|1:100:31      0|0:100:81
+20     35405348        rs6017919       G       A       .       PASS    AA=G;DP=143     GT:GQ:DP        0|1:100:33      0|1:100:32      0|0:100:80
+5      75199466        rs55677203      A       G       .       PASS    AA=A;DP=140     GT:GQ:DP        0|1:100:33      0|1:100:33      0|0:100:68
+3      101758225       .       A       C       .       PASS    AA=A;DP=142     GT:GQ:DP        0|1:100:33      0|1:100:35      0|0:100:74
+11     130669999       rs11222565      G       A       .       PASS    AA=G;DP=163     GT:GQ:DP        0|1:100:33      0|1:100:36      0|0:100:89
+8      5328143 rs973179        T       C       .       PASS    AA=t;DP=142     GT:GQ:DP        0|1:100:33      0|1:100:40      0|0:100:70
+14     101033139       rs1889364       A       G       .       PASS    AA=G;DP=116     GT:GQ:DP        0|1:100:33      0|1:31:14       0|0:100:71
+6      138558989       .       T       C       .       PASS    AA=T;DP=136     GT:GQ:DP        0|1:100:33      0|1:33:22       0|0:100:83
+6      35140974        rs6937805       T       A       .       PASS    AA=T;DP=115     GT:GQ:DP        0|1:100:33      0|1:39:13       0|0:100:56
+12     127128379       rs9795802       A       G       .       PASS    AA=A;DP=127     GT:GQ:DP        0|1:100:33      0|1:43:16       0|0:100:77
+9      94183489        rs11792342      G       A       .       PASS    AA=G;DP=88      GT:GQ:DP        0|1:100:33      0|1:48:14       0|0:93:32
+5      180097187       .       A       C       .       PASS    AA=A;DP=130     GT:GQ:DP        0|1:100:33      0|1:51:24       0|0:100:74
+17     37663571        rs9906933       G       A       .       PASS    AA=G;DP=107     GT:GQ:DP        0|1:100:33      0|1:58:15       0|0:100:56
+1      101793484       rs28752328      G       A       .       PASS    AA=N;DP=121     GT:GQ:DP        0|1:100:33      0|1:58:27       0|0:100:59
+20     4070805 rs1764996       C       T       .       PASS    AA=C;DP=162     GT:GQ:DP        0|1:100:33      0|1:58:29       0|0:100:50
+3      195800836       rs9843938       G       A       .       PASS    AA=.;DP=131     GT:GQ:DP        0|1:100:33      0|1:59:16       0|0:100:81
+5      159528697       rs4244406       C       T       .       PASS    AA=C;DP=125     GT:GQ:DP        0|1:100:33      0|1:62:23       0|0:100:64
+11     123322558       rs28722539      G       C       .       PASS    AA=-;DP=143     GT:GQ:DP        0|1:100:33      0|1:65:30       0|0:100:80
+8      72792824        rs58342128      T       C       .       PASS    AA=T;DP=152     GT:GQ:DP        0|1:100:33      0|1:67:21       0|0:100:50
+18     7135210 rs34130539      T       A       .       PASS    AA=T;DP=101     GT:GQ:DP        0|1:100:33      0|1:75:26       0|0:99:34
+20     29584443        rs6058035       G       A       .       PASS    AA=G;DP=130     GT:GQ:DP        0|1:100:33      0|1:78:26       0|0:100:73
+1      63526810        rs6674393       T       C       .       PASS    AA=T;DP=101;HM2 GT:GQ:DP        0|1:100:33      0|1:80:19       0|0:100:39
+6      130048946       rs6928167       G       A       .       PASS    AA=g;DP=128     GT:GQ:DP        0|1:100:33      0|1:80:24       0|0:100:72
+6      148295807       .       G       A       .       PASS    AA=G;DP=135     GT:GQ:DP        0|1:100:33      0|1:80:30       0|0:100:73
+8      25586028        rs2467711       C       T       .       PASS    AA=T;DP=133     GT:GQ:DP        0|1:100:33      0|1:83:23       0|0:100:77
+17     15858630        rs8074888       G       A       .       PASS    AA=A;DP=145     GT:GQ:DP        0|1:100:33      0|1:84:31       0|0:100:82
+3      197282223       .       T       C       .       PASS    AA=T;DP=121     GT:GQ:DP        0|1:100:33      0|1:87:16       0|0:100:69
+6      2442100 .       G       C       .       PASS    AA=G;DP=150     GT:GQ:DP        0|1:100:33      0|1:91:26       0|0:100:95
+1      61255122        rs1694209       G       A       .       PASS    AA=A;DP=153;HM2 GT:GQ:DP        0|1:100:33      0|1:92:29       0|0:100:51
+6      159832284       rs9295102       G       A       .       PASS    AA=G;DP=147     GT:GQ:DP        0|1:100:33      0|1:93:26       0|0:100:88
+12     11674778        rs7312834       C       T       .       PASS    AA=T;DP=143     GT:GQ:DP        0|1:100:33      0|1:97:34       0|0:100:75
+2      203247311       rs9288330       C       T       .       PASS    AA=T;DP=139     GT:GQ:DP        0|1:100:33      0|1:98:24       0|0:100:89
+14     106243562       rs10130965      T       C       .       PASS    AA=.;DP=107     GT:GQ:DP        0|1:100:33      1|1:17:22       0|1:100:49
+2      169382254       rs830029        A       G       .       PASS    AA=G;DP=119     GT:GQ:DP        0|1:100:33      1|1:21:19       0|1:100:68
+12     112657169       rs12307143      G       C       .       PASS    AA=C;DP=113     GT:GQ:DP        0|1:100:33      1|1:24:16       0|1:100:63
+12     50998616        rs2857664       G       A       .       PASS    AA=G;DP=112     GT:GQ:DP        0|1:100:33      1|1:29:16       0|1:100:63
+17     73719277        rs3764385       C       T       .       PASS    AA=C;DP=103     GT:GQ:DP        0|1:100:33      1|1:30:11       0|1:100:50
+5      91021612        rs2973827       A       C       .       PASS    AA=A;DP=126     GT:GQ:DP        0|1:100:33      1|1:38:25       0|1:100:67
+5      129513565       rs249606        G       A       .       PASS    AA=A;DP=110     GT:GQ:DP        0|1:100:33      1|1:39:15       0|1:100:62
+3      8272945 rs9844894       G       A       .       PASS    AA=A;DP=113     GT:GQ:DP        0|1:100:33      1|1:39:15       0|1:100:65
+9      111062076       rs10979779      A       G       .       PASS    AA=A;DP=120     GT:GQ:DP        0|1:100:33      1|1:39:15       0|1:100:72
+4      70986107        rs2331922       A       G       .       PASS    AA=N;DP=145     GT:GQ:DP        0|1:100:33      1|1:39:20       0|1:100:90
+18     34637398        rs8098442       C       T       .       PASS    AA=C;DP=109     GT:GQ:DP        0|1:100:33      1|1:42:15       0|1:100:61
+8      54659754        rs979361        A       G       .       PASS    AA=G;DP=111     GT:GQ:DP        0|1:100:33      1|1:42:15       0|1:100:62
+14     95343023        rs7150663       T       C       .       PASS    AA=t;DP=123     GT:GQ:DP        0|1:100:33      1|1:42:16       0|1:100:76
+15     88509693        rs10152809      G       A       .       PASS    AA=G;DP=135     GT:GQ:DP        0|1:100:33      1|1:42:21       0|1:100:42
+7      105143635       rs601781        C       A       .       PASS    AA=A;DP=114     GT:GQ:DP        0|1:100:33      1|1:45:16       0|1:100:64
+3      172467294       rs11927009      T       G       .       PASS    AA=G;DP=114     GT:GQ:DP        0|1:100:33      1|1:45:20       0|1:100:59
+5      75607267        rs2937750       C       T       .       PASS    AA=C;DP=125     GT:GQ:DP        0|1:100:33      1|1:48:17       0|1:100:77
+3      32654710        rs6764504       T       C       .       PASS    AA=C;DP=135     GT:GQ:DP        0|1:100:33      1|1:48:22       0|1:100:80
+8      61594561        rs4403445       G       A       .       PASS    AA=A;DP=135     GT:GQ:DP        0|1:100:33      1|1:51:18       0|1:100:86
+16     80755163        rs6564992       T       C       .       PASS    AA=T;DP=113     GT:GQ:DP        0|1:100:33      1|1:51:19       0|1:100:62
+16     77770740        rs12716871      C       G       .       PASS    AA=G;DP=143     GT:GQ:DP        0|1:100:33      1|1:54:20       0|1:100:90
+8      134037934       rs56069721      C       A       .       PASS    AA=C;DP=130     GT:GQ:DP        0|1:100:33      1|1:57:20       0|1:100:80
+12     92997567        rs1579569       A       G       .       PASS    AA=A;DP=145     GT:GQ:DP        0|1:100:33      1|1:57:22       0|1:100:90
+14     81124053        rs7145652       G       T       .       PASS    AA=T;DP=111     GT:GQ:DP        0|1:100:33      1|1:60:21       0|1:100:58
+17     23862921        rs880374        G       A       .       PASS    AA=G;DP=121     GT:GQ:DP        0|1:100:33      1|1:60:21       0|1:100:69
+9      122134230       rs10984894      T       G       .       PASS    AA=G;DP=132     GT:GQ:DP        0|1:100:33      1|1:60:21       0|1:100:78
+17     44363545        rs4793993       C       T       .       PASS    AA=C;DP=132     GT:GQ:DP        0|1:100:33      1|1:60:22       0|1:100:75
+2      21463240        rs6546010       G       A       .       PASS    AA=G;DP=131     GT:GQ:DP        0|1:100:33      1|1:60:22       0|1:100:76
+17     5574706 rs2535584       G       A       .       PASS    AA=g;DP=134     GT:GQ:DP        0|1:100:33      1|1:60:29       0|1:100:73
+14     19965486        rs945012        T       C       .       PASS    AA=T;DP=144     GT:GQ:DP        0|1:100:33      1|1:61:27       0|1:100:85
+5      78039465        rs2910615       C       A       .       PASS    AA=A;DP=123     GT:GQ:DP        0|1:100:33      1|1:62:32       0|1:100:58
+16     8209963 rs61139360      C       T       .       PASS    AA=T;DP=106     GT:GQ:DP        0|1:100:33      1|1:63:22       0|1:100:49
+3      173657768       rs490683        G       C       .       PASS    AA=G;DP=109     GT:GQ:DP        0|1:100:33      1|1:63:23       0|1:100:50
+13     52897211        rs7998888       G       A       .       PASS    AA=A;DP=121     GT:GQ:DP        0|1:100:33      1|1:63:23       0|1:100:67
+1      88379835        rs1932761       C       T       .       PASS    AA=T;DP=140;HM2;HM3     GT:GQ:DP        0|1:100:33      1|1:65:29       0|1:100:76
+14     31897682        rs1957655       G       A       .       PASS    AA=G;DP=126     GT:GQ:DP        0|1:100:33      1|1:66:23       0|1:100:71
+4      89260320        rs2622618       A       G       .       PASS    AA=G;DP=130     GT:GQ:DP        0|1:100:33      1|1:66:23       0|1:100:76
+7      144508397       rs11983006      G       A       .       PASS    AA=A;DP=113     GT:GQ:DP        0|1:100:33      1|1:66:24       0|1:100:57
+5      84667029        rs566303        C       G       .       PASS    AA=c;DP=115     GT:GQ:DP        0|1:100:33      1|1:66:24       0|1:100:59
+4      160144262       rs478560        T       C       .       PASS    AA=T;DP=129     GT:GQ:DP        0|1:100:33      1|1:66:26       0|1:100:69
+8      61311442        rs10111628      T       C       .       PASS    AA=C;DP=122     GT:GQ:DP        0|1:100:33      1|1:69:24       0|1:100:66
+12     13780664        rs4764030       T       C       .       PASS    AA=C;DP=139     GT:GQ:DP        0|1:100:33      1|1:69:24       0|1:100:79
+13     23305297        rs2312560       T       C       .       PASS    AA=T;DP=116     GT:GQ:DP        0|1:100:33      1|1:72:25       0|1:100:57
+5      107332000       rs17437979      T       C       .       PASS    AA=T;DP=116     GT:GQ:DP        0|1:100:33      1|1:72:25       0|1:100:58
+10     27815705        rs4634991       T       C       .       PASS    AA=C;DP=124     GT:GQ:DP        0|1:100:33      1|1:72:25       0|1:100:64
+5      154249840       rs816738        T       C       .       PASS    AA=C;DP=153     GT:GQ:DP        0|1:100:33      1|1:75:26       0|1:100:91
+12     16235442        rs7955194       C       T       .       PASS    AA=C;DP=128     GT:GQ:DP        0|1:100:33      1|1:75:27       0|1:100:70
+12     32096616        rs1716945       A       G       .       PASS    AA=N;DP=154     GT:GQ:DP        0|1:100:33      1|1:75:27       0|1:100:94
+14     85356963        rs8014183       C       T       .       PASS    AA=T;DP=144     GT:GQ:DP        0|1:100:33      1|1:78:27       0|1:100:71
+11     121241881       rs11218429      A       C       .       PASS    AA=A;DP=141     GT:GQ:DP        0|1:100:33      1|1:80:34       0|1:100:74
+4      34090753        rs28597402      C       T       .       PASS    AA=T;DP=132     GT:GQ:DP        0|1:100:33      1|1:81:28       0|1:100:74
+19     62320939        rs7256469       G       C       .       PASS    AA=C;DP=130     GT:GQ:DP        0|1:100:33      1|1:81:29       0|1:100:69
+22     19688522        rs430305        C       T       .       PASS    AA=T;DP=148     GT:GQ:DP        0|1:100:33      1|1:84:29       0|1:100:40
+16     76948577        rs11150063      G       C       .       PASS    AA=C;DP=158     GT:GQ:DP        0|1:100:33      1|1:87:30       0|1:100:95
+5      160213616       rs13180602      G       A       .       PASS    AA=A;DP=117     GT:GQ:DP        0|1:100:33      1|1:87:31       0|1:100:53
+8      9771325 rs2409600       T       C       .       PASS    AA=N;DP=142     GT:GQ:DP        0|1:100:33      1|1:87:32       0|1:100:75
+7      14806357        rs11973184      C       G       .       PASS    AA=G;DP=115     GT:GQ:DP        0|1:100:33      1|1:8:17        0|1:100:67
+16     71904796        rs4566194       A       C       .       PASS    AA=A;DP=157     GT:GQ:DP        0|1:100:33      1|1:93:33       0|1:100:93
+4      175261961       rs11933156      A       G       .       PASS    AA=A;DP=134     GT:GQ:DP        0|1:100:33      1|1:96:33       0|1:100:68
+4      108038682       rs439922        T       A       .       PASS    AA=T;DP=120     GT:GQ:DP        0|1:100:34      0|0:100:32      0|0:100:54
+2      139101774       rs7593602       A       G       .       PASS    AA=A;DP=142     GT:GQ:DP        0|1:100:34      0|0:100:32      0|0:100:76
+2      6063934 .       C       T       .       PASS    AA=C;DP=145     GT:GQ:DP        0|1:100:34      0|0:100:32      0|0:100:79
+4      111165308       .       G       C       .       PASS    AA=G;DP=163     GT:GQ:DP        0|1:100:34      0|0:100:32      0|0:100:98
+10     109911226       .       G       T       .       PASS    AA=G;DP=122     GT:GQ:DP        0|1:100:34      0|0:100:33      0|0:100:56
+3      1097333 .       G       C       .       PASS    AA=G;DP=139     GT:GQ:DP        0|1:100:34      0|0:100:33      0|0:100:70
+20     17705789        .       C       A       .       PASS    AA=C;DP=144     GT:GQ:DP        0|1:100:34      0|0:100:35      0|0:100:75
+16     5458428 rs3848379       A       G       .       PASS    AA=A;DP=157     GT:GQ:DP        0|1:100:34      0|0:100:37      0|0:100:86
+6      101031857       rs9497562       C       T       .       PASS    AA=C;DP=157     GT:GQ:DP        0|1:100:34      0|0:100:38      0|0:100:87
+12     27139643        rs61920405      A       G       .       PASS    AA=a;DP=173     GT:GQ:DP        0|1:100:34      0|0:100:40      0|0:100:51
+5      67384019        .       C       T       .       PASS    AA=C;DP=163     GT:GQ:DP        0|1:100:34      0|0:100:40      0|0:92:47
+2      143051804       rs16857651      G       A       .       PASS    AA=G;DP=115     GT:GQ:DP        0|1:100:34      0|0:18:12       0|0:100:69
+9      29751393        rs1467825       T       C       .       PASS    AA=T;DP=117     GT:GQ:DP        0|1:100:34      0|0:20:12       0|0:100:72
+19     708037  rs35093527      T       C       .       PASS    AA=T;DP=123     GT:GQ:DP        0|1:100:34      0|0:25:14       0|0:100:72
+5      32405565        rs10072102      C       T       .       PASS    AA=C;DP=138     GT:GQ:DP        0|1:100:34      0|0:27:23       0|0:100:83
+7      100706617       .       G       A       .       PASS    AA=G;DP=120     GT:GQ:DP        0|1:100:34      0|0:29:14       0|0:100:69
+18     59003065        rs1481031       T       C       .       PASS    AA=T;DP=132     GT:GQ:DP        0|1:100:34      0|0:35:21       0|0:100:79
+17     19234451        .       C       G       .       PASS    AA=C;DP=142     GT:GQ:DP        0|1:100:34      0|0:38:14       0|0:100:52
+11     129118397       rs691570        G       T       .       PASS    AA=G;DP=128     GT:GQ:DP        0|1:100:34      0|0:38:17       0|0:100:71
+9      121670024       .       G       T       .       PASS    AA=G;DP=138     GT:GQ:DP        0|1:100:34      0|0:38:19       0|0:100:81
+6      156215  rs17133783      C       T       .       PASS    AA=.;DP=142     GT:GQ:DP        0|1:100:34      0|0:38:22       0|0:100:84
+4      187109499       rs1551438       G       A       .       PASS    AA=G;DP=135     GT:GQ:DP        0|1:100:34      0|0:39:17       0|0:100:82
+19     17039416        .       C       A       .       PASS    AA=C;DP=130     GT:GQ:DP        0|1:100:34      0|0:39:18       0|0:100:78
+9      7969082 rs2025192       T       C       .       PASS    AA=T;DP=105     GT:GQ:DP        0|1:100:34      0|0:40:17       0|0:100:56
+2      209109593       .       A       G       .       PASS    AA=a;DP=133     GT:GQ:DP        0|1:100:34      0|0:41:12       0|0:100:89
+16     86215675        rs3849255       T       C       .       PASS    AA=C;DP=131     GT:GQ:DP        0|1:100:34      0|0:43:17       0|0:100:78
+10     107387233       rs12252589      C       T       .       PASS    AA=C;DP=133     GT:GQ:DP        0|1:100:34      0|0:43:19       0|0:100:81
+2      128121721       .       G       A       .       PASS    AA=G;DP=109     GT:GQ:DP        0|1:100:34      0|0:44:13       0|0:100:61
+14     94216468        .       A       C       .       PASS    AA=A;DP=120     GT:GQ:DP        0|1:100:34      0|0:44:13       0|0:100:73
+1      158651693       rs6684307       G       C       .       PASS    AA=G;DP=128;HM2 GT:GQ:DP        0|1:100:34      0|0:44:14       0|0:100:81
+8      101984486       rs3134373       G       A       .       PASS    AA=G;DP=150     GT:GQ:DP        0|1:100:34      0|0:44:15       0|0:100:102
+1      219478211       .       C       T       .       PASS    AA=T;DP=114     GT:GQ:DP        0|1:100:34      0|0:46:20       0|0:100:62
+2      88377078        .       T       G       .       PASS    AA=T;DP=142     GT:GQ:DP        0|1:100:34      0|0:46:25       0|0:99:44
+1      102179901       rs1887467       C       T       .       PASS    AA=c;DP=110;HM2;HM3     GT:GQ:DP        0|1:100:34      0|0:47:15       0|0:100:62
+3      13673177        .       G       A       .       PASS    AA=G;DP=121     GT:GQ:DP        0|1:100:34      0|0:47:15       0|0:100:73
+15     40079314        rs56132636      C       T       .       PASS    AA=C;DP=121     GT:GQ:DP        0|1:100:34      0|0:47:15       0|0:100:74
+18     3792724 rs56365340      A       G       .       PASS    AA=A;DP=118     GT:GQ:DP        0|1:100:34      0|0:47:16       0|0:100:69
+13     20100350        rs9552253       T       C       .       PASS    AA=T;DP=114     GT:GQ:DP        0|1:100:34      0|0:47:19       0|0:100:48
+1      71027321        rs12127782      C       T       .       PASS    AA=C;DP=129;HM2 GT:GQ:DP        0|1:100:34      0|0:49:20       0|0:100:73
+12     41360701        rs4238086       C       T       .       PASS    AA=C;DP=99      GT:GQ:DP        0|1:100:34      0|0:50:15       0|0:100:39
+9      126082778       .       C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        0|1:100:34      0|0:50:16       0|0:100:70
+7      8441935 .       A       G       .       PASS    AA=G;DP=127     GT:GQ:DP        0|1:100:34      0|0:50:16       0|0:100:78
+5      26971223        rs10072642      T       C       .       PASS    AA=T;DP=138     GT:GQ:DP        0|1:100:34      0|0:50:23       0|0:100:39
+4      187348142       rs34233508      A       T       .       PASS    AA=A;DP=115     GT:GQ:DP        0|1:100:34      0|0:51:22       0|0:100:58
+1      64329490        .       C       T       .       PASS    AA=C;DP=108     GT:GQ:DP        0|1:100:34      0|0:53:16       0|0:100:60
+10     113360845       .       G       A       .       PASS    AA=A;DP=103     GT:GQ:DP        0|1:100:34      0|0:53:17       0|0:100:53
+9      136980679       .       A       G       .       PASS    AA=A;DP=109     GT:GQ:DP        0|1:100:34      0|0:53:17       0|0:100:58
+8      38595120        rs34959960      G       A       .       PASS    AA=g;DP=130     GT:GQ:DP        0|1:100:34      0|0:53:17       0|0:100:79
+17     39986246        rs62078793      G       A       .       PASS    AA=G;DP=120     GT:GQ:DP        0|1:100:34      0|0:53:18       0|0:100:69
+9      134074298       rs13293982      G       A       .       PASS    AA=G;DP=142     GT:GQ:DP        0|1:100:34      0|0:53:18       0|0:100:93
+5      9961011 rs61254616      G       A       .       PASS    AA=G;DP=127     GT:GQ:DP        0|1:100:34      0|0:53:19       0|0:100:74
+2      66730205        rs6710894       C       T       .       PASS    AA=C;DP=139     GT:GQ:DP        0|1:100:34      0|0:53:26       0|0:82:39
+4      21740877        rs9992073       G       A       .       PASS    AA=G;DP=128     GT:GQ:DP        0|1:100:34      0|0:54:23       0|0:100:71
+6      45551327        rs2790099       T       C       .       PASS    AA=C;DP=133     GT:GQ:DP        0|1:100:34      0|0:55:28       0|0:99:33
+21     41915928        rs3862035       G       A       .       PASS    AA=G;DP=138     GT:GQ:DP        0|1:100:34      0|0:56:17       0|0:100:46
+1      41955502        .       G       A       .       PASS    AA=G;DP=156     GT:GQ:DP        0|1:100:34      0|0:56:17       0|0:100:57
+17     17619801        rs4924816       G       C       .       PASS    AA=g;DP=113     GT:GQ:DP        0|1:100:34      0|0:56:17       0|0:100:61
+3      171076320       rs7652654       A       G       .       PASS    AA=A;DP=115     GT:GQ:DP        0|1:100:34      0|0:56:17       0|0:100:62
+12     108354949       rs10492216      G       T       .       PASS    AA=G;DP=140     GT:GQ:DP        0|1:100:34      0|0:56:17       0|0:100:88
+1      175449367       .       A       G       .       PASS    AA=A;DP=108     GT:GQ:DP        0|1:100:34      0|0:56:18       0|0:100:54
+22     37184374        rs9607542       A       G       .       PASS    AA=A;DP=127     GT:GQ:DP        0|1:100:34      0|0:56:18       0|0:100:73
+19     45871436        .       G       A       .       PASS    AA=G;DP=129     GT:GQ:DP        0|1:100:34      0|0:56:19       0|0:100:77
+4      23153057        rs58933718      T       G       .       PASS    AA=T;DP=160     GT:GQ:DP        0|1:100:34      0|0:58:29       0|0:100:51
+5      111010239       rs1902801       G       A       .       PASS    AA=G;DP=114     GT:GQ:DP        0|1:100:34      0|0:59:18       0|0:100:67
+1      145736438       rs12119463      A       T       .       PASS    AA=T;DP=126;HM2 GT:GQ:DP        0|1:100:34      0|0:59:18       0|0:100:71
+17     5886600 rs4247116       C       T       .       PASS    AA=C;DP=133     GT:GQ:DP        0|1:100:34      0|0:59:18       0|0:100:83
+1      222440612       .       A       C       .       PASS    AA=A;DP=102     GT:GQ:DP        0|1:100:34      0|0:59:19       0|0:100:36
+17     38320611        .       C       T       .       PASS    AA=c;DP=139     GT:GQ:DP        0|1:100:34      0|0:59:19       0|0:100:44
+8      72412915        rs1900076       T       C       .       PASS    AA=T;DP=120     GT:GQ:DP        0|1:100:34      0|0:59:19       0|0:100:63
+13     36959307        rs7337526       C       T       .       PASS    AA=T;DP=132     GT:GQ:DP        0|1:100:34      0|0:59:19       0|0:100:81
+2      10826785        rs57127376      T       C       .       PASS    AA=T;DP=134     GT:GQ:DP        0|1:100:34      0|0:59:22       0|0:100:66
+13     73808964        rs7332421       A       G       .       PASS    AA=A;DP=128     GT:GQ:DP        0|1:100:34      0|0:59:29       0|0:100:63
+1      171756411       .       A       T       .       PASS    AA=A;DP=100     GT:GQ:DP        0|1:100:34      0|0:62:19       0|0:100:45
+6      24539037        rs793687        G       T       .       PASS    AA=G;DP=147     GT:GQ:DP        0|1:100:34      0|0:62:19       0|0:100:52
+5      141908680       rs33959 G       T       .       PASS    AA=T;DP=151     GT:GQ:DP        0|1:100:34      0|0:62:19       0|0:100:54
+2      136248998       .       A       G       .       PASS    AA=A;DP=116     GT:GQ:DP        0|1:100:34      0|0:62:19       0|0:100:64
+17     25418999        .       G       A       .       PASS    AA=G;DP=126     GT:GQ:DP        0|1:100:34      0|0:62:19       0|0:100:68
+11     74122239        .       C       A       .       PASS    AA=C;DP=125     GT:GQ:DP        0|1:100:34      0|0:62:19       0|0:100:72
+7      140141346       rs28446531      A       G       .       PASS    AA=A;DP=132     GT:GQ:DP        0|1:100:34      0|0:62:19       0|0:100:74
+6      7504363 .       A       G       .       PASS    AA=.;DP=131     GT:GQ:DP        0|1:100:34      0|0:62:19       0|0:100:79
+14     104095559       rs4247039       G       A       .       PASS    AA=g;DP=165     GT:GQ:DP        0|1:100:34      0|0:62:21       0|0:100:59
+19     49997520        .       T       C       .       PASS    AA=C;DP=129     GT:GQ:DP        0|1:100:34      0|0:62:21       0|0:100:73
+4      42486105        rs10022646      G       T       .       PASS    AA=G;DP=159     GT:GQ:DP        0|1:100:34      0|0:63:31       0|0:100:53
+18     39241805        .       C       T       .       PASS    AA=-;DP=146     GT:GQ:DP        0|1:100:34      0|0:65:20       0|0:100:48
+3      173392369       .       T       A       .       PASS    AA=t;DP=150     GT:GQ:DP        0|1:100:34      0|0:65:20       0|0:100:48
+2      78033371        .       G       A       .       PASS    AA=A;DP=106     GT:GQ:DP        0|1:100:34      0|0:65:20       0|0:100:51
+12     94534118        rs11108153      T       C       .       PASS    AA=T;DP=122     GT:GQ:DP        0|1:100:34      0|0:65:20       0|0:100:67
+6      143876734       .       T       C       .       PASS    AA=T;DP=123     GT:GQ:DP        0|1:100:34      0|0:65:20       0|0:100:72
+17     16949923        rs11078372      T       C       .       PASS    AA=T;DP=127     GT:GQ:DP        0|1:100:34      0|0:65:20       0|0:100:74
+18     73943586        .       G       A       .       PASS    AA=G;DP=141     GT:GQ:DP        0|1:100:34      0|0:65:20       0|0:100:86
+8      136246598       rs11995680      T       C       .       PASS    AA=T;DP=142     GT:GQ:DP        0|1:100:34      0|0:65:20       0|0:100:87
+8      22296233        .       C       T       .       PASS    AA=C;DP=139     GT:GQ:DP        0|1:100:34      0|0:65:20       0|0:100:87
+5      56531517        .       T       G       .       PASS    AA=T;DP=125     GT:GQ:DP        0|1:100:34      0|0:65:21       0|0:100:72
+2      77859377        .       A       C       .       PASS    AA=A;DP=130     GT:GQ:DP        0|1:100:34      0|0:65:22       0|0:100:71
+5      11671547        rs16901807      G       C       .       PASS    AA=G;DP=138     GT:GQ:DP        0|1:100:34      0|0:66:26       0|0:100:37
+12     46239617        rs2051825       G       T       .       PASS    AA=g;DP=132     GT:GQ:DP        0|1:100:34      0|0:68:21       0|0:100:79
+5      3723489 .       C       T       .       PASS    AA=C;DP=135     GT:GQ:DP        0|1:100:34      0|0:68:21       0|0:100:82
+8      37209534        rs10504002      G       A       .       PASS    AA=A;DP=132     GT:GQ:DP        0|1:100:34      0|0:68:22       0|0:100:75
+3      109940247       rs7640311       G       C       .       PASS    AA=C;DP=105     GT:GQ:DP        0|1:100:34      0|0:68:23       0|0:82:39
+14     88464691        .       G       A       .       PASS    AA=G;DP=143     GT:GQ:DP        0|1:100:34      0|0:69:29       0|0:100:77
+12     95782423        .       A       T       .       PASS    AA=a;DP=132     GT:GQ:DP        0|1:100:34      0|0:69:30       0|0:100:70
+6      108244384       .       T       C       .       PASS    AA=T;DP=143     GT:GQ:DP        0|1:100:34      0|0:69:32       0|0:100:78
+20     54847676        rs1887927       T       C       .       PASS    AA=T;DP=125     GT:GQ:DP        0|1:100:34      0|0:6:11        0|0:100:83
+3      103942922       .       A       G       .       PASS    AA=A;DP=166     GT:GQ:DP        0|1:100:34      0|0:70:28       0|0:100:52
+3      125412448       .       A       T       .       PASS    AA=a;DP=120     GT:GQ:DP        0|1:100:34      0|0:70:29       0|0:100:59
+18     9091947 rs2249997       T       G       .       PASS    AA=T;DP=151     GT:GQ:DP        0|1:100:34      0|0:71:22       0|0:100:42
+4      70481148        .       G       A       .       PASS    AA=A;DP=126     GT:GQ:DP        0|1:100:34      0|0:71:22       0|0:100:69
+6      109990525       .       C       T       .       PASS    AA=C;DP=129     GT:GQ:DP        0|1:100:34      0|0:71:22       0|0:100:73
+11     113648193       rs7930540       T       A       .       PASS    AA=T;DP=141     GT:GQ:DP        0|1:100:34      0|0:71:22       0|0:100:83
+5      134333545       .       G       A       .       PASS    AA=G;DP=146     GT:GQ:DP        0|1:100:34      0|0:71:22       0|0:100:91
+14     43404085        .       C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        0|1:100:34      0|0:71:24       0|0:100:55
+15     53200682        rs28572587      T       C       .       PASS    AA=C;DP=148     GT:GQ:DP        0|1:100:34      0|0:71:28       0|0:100:81
+13     40283748        .       G       A       .       PASS    AA=G;DP=153     GT:GQ:DP        0|1:100:34      0|0:71:33       0|0:100:75
+11     132846920       .       A       T       .       PASS    AA=A;DP=141     GT:GQ:DP        0|1:100:34      0|0:74:23       0|0:100:43
+20     38499532        .       A       C       .       PASS    AA=A;DP=148     GT:GQ:DP        0|1:100:34      0|0:74:23       0|0:100:48
+15     77716451        rs4778713       T       C       .       PASS    AA=T;DP=164     GT:GQ:DP        0|1:100:34      0|0:74:23       0|0:100:63
+6      151507974       rs11970582      C       T       .       PASS    AA=C;DP=131     GT:GQ:DP        0|1:100:34      0|0:74:23       0|0:100:76
+2      71087837        rs6759863       C       A       .       PASS    AA=A;DP=135     GT:GQ:DP        0|1:100:34      0|0:74:23       0|0:100:80
+5      171103077       .       C       T       .       PASS    AA=C;DP=152     GT:GQ:DP        0|1:100:34      0|0:74:24       0|0:100:42
+3      44427341        rs7626171       A       T       .       PASS    AA=T;DP=121     GT:GQ:DP        0|1:100:34      0|0:74:24       0|0:100:64
+9      79018203        rs7037530       A       G       .       PASS    AA=A;DP=138     GT:GQ:DP        0|1:100:34      0|0:74:24       0|0:100:76
+19     40698786        .       A       G       .       PASS    AA=A;DP=155     GT:GQ:DP        0|1:100:34      0|0:74:25       0|0:100:95
+22     43405154        rs58668779      C       G       .       PASS    AA=C;DP=160     GT:GQ:DP        0|1:100:34      0|0:74:26       0|0:100:50
+5      14088757        rs16903033      G       A       .       PASS    AA=G;DP=160     GT:GQ:DP        0|1:100:34      0|0:75:35       0|0:100:97
+15     66034225        rs12101950      T       C       .       PASS    AA=T;DP=164     GT:GQ:DP        0|1:100:34      0|0:77:24       0|0:100:64
+11     87334532        rs11235377      G       C       .       PASS    AA=C;DP=129     GT:GQ:DP        0|1:100:34      0|0:77:24       0|0:100:70
+2      121607353       rs55914252      G       A       .       PASS    AA=G;DP=128     GT:GQ:DP        0|1:100:34      0|0:77:24       0|0:100:70
+9      14542427        rs10961568      A       G       .       PASS    AA=A;DP=125     GT:GQ:DP        0|1:100:34      0|0:77:24       0|0:100:71
+11     108420711       rs12576105      G       C       .       PASS    AA=C;DP=131     GT:GQ:DP        0|1:100:34      0|0:77:24       0|0:100:73
+11     119304144       rs681133        C       T       .       PASS    AA=T;DP=135     GT:GQ:DP        0|1:100:34      0|0:77:24       0|0:100:75
+4      173887420       rs10213357      A       G       .       PASS    AA=A;DP=136     GT:GQ:DP        0|1:100:34      0|0:77:25       0|0:100:76
+11     30774015        rs911266        T       C       .       PASS    AA=T;DP=140     GT:GQ:DP        0|1:100:34      0|0:77:26       0|0:100:75
+3      10267140        rs2270454       C       T       .       PASS    AA=C;DP=140     GT:GQ:DP        0|1:100:34      0|0:77:27       0|0:100:83
+19     13868696        rs10415098      G       A       .       PASS    AA=G;DP=128     GT:GQ:DP        0|1:100:34      0|0:77:30       0|0:100:65
+20     45938922        .       A       G       .       PASS    AA=a;DP=153     GT:GQ:DP        0|1:100:34      0|0:79:32       0|0:100:89
+18     46311343        .       G       A       .       PASS    AA=G;DP=129     GT:GQ:DP        0|1:100:34      0|0:80:25       0|0:100:68
+4      182746803       rs6837111       T       C       .       PASS    AA=T;DP=129     GT:GQ:DP        0|1:100:34      0|0:80:25       0|0:100:70
+10     69545144        .       T       C       .       PASS    AA=C;DP=147     GT:GQ:DP        0|1:100:34      0|0:80:25       0|0:100:88
+1      209264979       .       T       C       .       PASS    AA=T;DP=154     GT:GQ:DP        0|1:100:34      0|0:80:25       0|0:100:91
+10     61265116        rs1822913       T       C       .       PASS    AA=T;DP=135     GT:GQ:DP        0|1:100:34      0|0:80:26       0|0:100:76
+3      9027494 rs383563        A       G       .       PASS    AA=A;DP=140     GT:GQ:DP        0|1:100:34      0|0:80:26       0|0:100:85
+10     12495399        rs2724800       A       G       .       PASS    AA=a;DP=150     GT:GQ:DP        0|1:100:34      0|0:80:26       0|0:100:90
+4      175563458       rs34175211      A       C       .       PASS    AA=A;DP=127     GT:GQ:DP        0|1:100:34      0|0:80:27       0|0:100:72
+18     75426434        rs7233024       C       A       .       PASS    AA=C;DP=129     GT:GQ:DP        0|1:100:34      0|0:80:31       0|0:100:64
+20     51010131        .       C       T       .       PASS    AA=C;DP=147     GT:GQ:DP        0|1:100:34      0|0:83:26       0|0:100:45
+7      72831384        .       A       G       .       PASS    AA=A;DP=156     GT:GQ:DP        0|1:100:34      0|0:83:26       0|0:100:56
+10     97225498        rs7085831       G       A       .       PASS    AA=G;DP=125     GT:GQ:DP        0|1:100:34      0|0:83:26       0|0:100:69
+10     6146516 .       C       T       .       PASS    AA=C;DP=148     GT:GQ:DP        0|1:100:34      0|0:83:26       0|0:90:39
+20     38732292        rs17174560      T       A       .       PASS    AA=N;DP=166     GT:GQ:DP        0|1:100:34      0|0:83:27       0|0:100:59
+8      136069250       rs10105274      G       A       .       PASS    AA=G;DP=148     GT:GQ:DP        0|1:100:34      0|0:83:27       0|0:100:87
+2      114292328       rs10202940      A       G       .       PASS    AA=A;DP=148     GT:GQ:DP        0|1:100:34      0|0:83:28       0|0:100:74
+1      105351810       rs12046922      A       G       .       PASS    AA=G;DP=124     GT:GQ:DP        0|1:100:34      0|0:86:27       0|0:100:50
+14     55754846        rs12894921      T       C       .       PASS    AA=T;DP=128     GT:GQ:DP        0|1:100:34      0|0:86:27       0|0:100:61
+20     39705848        .       A       G       .       PASS    AA=A;DP=168     GT:GQ:DP        0|1:100:34      0|0:86:27       0|0:100:62
+6      8628127 .       C       G       .       PASS    AA=C;DP=124     GT:GQ:DP        0|1:100:34      0|0:86:27       0|0:100:64
+14     76363743        .       A       G       .       PASS    AA=A;DP=131     GT:GQ:DP        0|1:100:34      0|0:86:27       0|0:100:68
+12     99442777        rs61046002      G       T       .       PASS    AA=G;DP=136     GT:GQ:DP        0|1:100:34      0|0:86:27       0|0:100:75
+6      20358892        rs2328391       C       G       .       PASS    AA=C;DP=137     GT:GQ:DP        0|1:100:34      0|0:86:27       0|0:100:75
+5      173167450       .       C       T       .       PASS    AA=c;DP=127     GT:GQ:DP        0|1:100:34      0|0:86:28       0|0:100:64
+16     19321265        .       C       T       .       PASS    AA=c;DP=140     GT:GQ:DP        0|1:100:34      0|0:86:28       0|0:100:79
+2      36552512        rs848554        A       G       .       PASS    AA=A;DP=142     GT:GQ:DP        0|1:100:34      0|0:86:28       0|0:100:79
+7      32014641        rs17336340      C       T       .       PASS    AA=T;DP=145     GT:GQ:DP        0|1:100:34      0|0:86:28       0|0:100:83
+8      117507555       .       C       T       .       PASS    AA=C;DP=149     GT:GQ:DP        0|1:100:34      0|0:86:29       0|0:100:80
+19     35517408        rs16964099      C       T       .       PASS    AA=C;DP=160     GT:GQ:DP        0|1:100:34      0|0:86:30       0|0:100:45
+5      108055785       rs10076319      T       A       .       PASS    AA=T;DP=137     GT:GQ:DP        0|1:100:34      0|0:86:30       0|0:100:73
+15     76656634        rs601079        T       A       .       PASS    AA=t;DP=142     GT:GQ:DP        0|1:100:34      0|0:89:28       0|0:100:78
+1      57625101        rs3738552       C       T       .       PASS    AA=C;DP=140;HM2;HM3     GT:GQ:DP        0|1:100:34      0|0:89:28       0|0:100:79
+1      242848300       .       T       C       .       PASS    AA=T;DP=141     GT:GQ:DP        0|1:100:34      0|0:89:28       0|0:100:80
+22     46059567        rs55744137      T       C       .       PASS    AA=t;DP=168     GT:GQ:DP        0|1:100:34      0|0:89:29       0|0:100:64
+7      114228078       .       A       G       .       PASS    AA=A;DP=145     GT:GQ:DP        0|1:100:34      0|0:89:29       0|0:100:83
+13     46635638        rs9595613       C       G       .       PASS    AA=C;DP=127     GT:GQ:DP        0|1:100:34      0|0:89:30       0|0:100:65
+13     109455143       .       T       C       .       PASS    AA=T;DP=146     GT:GQ:DP        0|1:100:34      0|0:89:31       0|0:100:44
+1      162598890       rs2077409       G       A       .       PASS    AA=A;DP=148;HM2 GT:GQ:DP        0|1:100:34      0|0:91:37       0|0:100:78
+2      68328270        rs7560138       A       G       .       PASS    AA=A;DP=162     GT:GQ:DP        0|1:100:34      0|0:92:29       0|0:100:40
+6      137426086       .       T       G       .       PASS    AA=N;DP=148     GT:GQ:DP        0|1:100:34      0|0:92:29       0|0:100:47
+3      198191024       .       C       G       .       PASS    AA=C;DP=161     GT:GQ:DP        0|1:100:34      0|0:92:29       0|0:100:53
+8      62375763        rs2978557       A       G       .       PASS    AA=A;DP=121     GT:GQ:DP        0|1:100:34      0|0:92:29       0|0:100:59
+2      178155452       rs13430517      C       A       .       PASS    AA=C;DP=135     GT:GQ:DP        0|1:100:34      0|0:92:29       0|0:100:74
+1      15048444        rs56293671      A       G       .       PASS    AA=G;DP=153     GT:GQ:DP        0|1:100:34      0|0:92:31       0|0:100:91
+8      98719317        .       T       C       .       PASS    AA=T;DP=170     GT:GQ:DP        0|1:100:34      0|0:95:30       0|0:100:58
+1      146281373       rs2932444       C       G       .       PASS    AA=.;DP=155;HM2 GT:GQ:DP        0|1:100:34      0|0:95:30       0|0:100:91
+11     19705231        .       A       C       .       PASS    AA=A;DP=159     GT:GQ:DP        0|1:100:34      0|0:95:30       0|0:100:96
+14     106220009       .       G       A       .       PASS    AA=g;DP=155     GT:GQ:DP        0|1:100:34      0|0:95:31       0|0:100:48
+11     101984759       rs1711420       T       C       .       PASS    AA=T;DP=133     GT:GQ:DP        0|1:100:34      0|0:95:31       0|0:100:68
+4      139935310       rs62322087      C       T       .       PASS    AA=C;DP=137     GT:GQ:DP        0|1:100:34      0|0:95:31       0|0:100:73
+5      11005521        rs852580        T       G       .       PASS    AA=G;DP=165     GT:GQ:DP        0|1:100:34      0|0:98:31       0|0:100:100
+7      4131283 .       T       C       .       PASS    AA=t;DP=153     GT:GQ:DP        0|1:100:34      0|0:98:31       0|0:100:43
+9      33711193        .       C       T       .       PASS    AA=t;DP=157     GT:GQ:DP        0|1:100:34      0|0:98:33       0|0:100:88
+2      30739362        rs2593468       G       A       .       PASS    AA=G;DP=148     GT:GQ:DP        0|1:100:34      0|1:100:12      0|0:100:97
+2      47105014        rs11885389      G       C       .       PASS    AA=C;DP=115     GT:GQ:DP        0|1:100:34      0|1:100:14      0|0:100:68
+8      92907831        rs7017906       C       T       .       PASS    AA=C;DP=131     GT:GQ:DP        0|1:100:34      0|1:100:16      0|0:100:61
+15     60329678        rs2013615       G       C       .       PASS    AA=N;DP=126     GT:GQ:DP        0|1:100:34      0|1:100:16      0|0:100:76
+4      108418332       rs35689895      T       A       .       PASS    AA=T;DP=119     GT:GQ:DP        0|1:100:34      0|1:100:17      0|0:100:64
+13     111669598       rs11842423      G       A       .       PASS    AA=G;DP=117     GT:GQ:DP        0|1:100:34      0|1:100:17      0|0:100:66
+2      137294094       .       G       A       .       PASS    AA=A;DP=131     GT:GQ:DP        0|1:100:34      0|1:100:18      0|0:100:80
+18     44132298        rs9960516       C       T       .       PASS    AA=C;DP=124     GT:GQ:DP        0|1:100:34      0|1:100:19      0|0:100:73
+12     126749546       rs11613397      G       A       .       PASS    AA=G;DP=154     GT:GQ:DP        0|1:100:34      0|1:100:20      0|0:100:100
+6      47710261        rs9395290       G       A       .       PASS    AA=A;DP=133     GT:GQ:DP        0|1:100:34      0|1:100:20      0|0:100:80
+1      220784411       rs17163186      A       G       .       PASS    AA=A;DP=116     GT:GQ:DP        0|1:100:34      0|1:100:21      0|0:100:61
+3      131617774       rs6439231       G       A       .       PASS    AA=A;DP=135     GT:GQ:DP        0|1:100:34      0|1:100:22      0|0:100:80
+2      187520486       rs10174908      C       T       .       PASS    AA=c;DP=136     GT:GQ:DP        0|1:100:34      0|1:100:22      0|0:100:81
+17     5655686 rs2159635       C       A       .       PASS    AA=C;DP=111     GT:GQ:DP        0|1:100:34      0|1:100:23      0|0:100:56
+21     36468365        rs12482539      T       G       .       PASS    AA=T;DP=144     GT:GQ:DP        0|1:100:34      0|1:100:23      0|0:100:85
+8      21343107        rs1549471       G       A       .       PASS    AA=G;DP=148     GT:GQ:DP        0|1:100:34      0|1:100:23      0|0:94:44
+3      62346598        rs1979673       A       G       .       PASS    AA=A;DP=123     GT:GQ:DP        0|1:100:34      0|1:100:24      0|0:100:66
+7      50725733        rs2158918       C       T       .       PASS    AA=C;DP=130     GT:GQ:DP        0|1:100:34      0|1:100:24      0|0:100:74
+3      144328005       rs4683447       C       T       .       PASS    AA=C;DP=169     GT:GQ:DP        0|1:100:34      0|1:100:25      0|0:100:58
+1      87391072        rs6576868       A       G       .       PASS    AA=A;DP=101     GT:GQ:DP        0|1:100:34      0|1:100:26      0|0:100:41
+3      29753163        rs1866772       C       T       .       PASS    AA=T;DP=129     GT:GQ:DP        0|1:100:34      0|1:100:26      0|0:100:68
+17     19942756        rs918227        A       G       .       PASS    AA=.;DP=168     GT:GQ:DP        0|1:100:34      0|1:100:26      0|0:100:70
+6      167553853       rs7739617       T       A       .       PASS    AA=T;DP=141     GT:GQ:DP        0|1:100:34      0|1:100:26      0|0:100:81
+9      81948144        rs28698819      G       T       .       PASS    AA=G;DP=135     GT:GQ:DP        0|1:100:34      0|1:100:26      0|0:68:30
+5      27830871        rs10055440      T       C       .       PASS    AA=T;DP=114     GT:GQ:DP        0|1:100:34      0|1:100:28      0|0:100:53
+8      2346057 rs6988982       T       C       .       PASS    AA=T;DP=129     GT:GQ:DP        0|1:100:34      0|1:100:28      0|0:100:69
+9      110874126       rs7851951       C       A       .       PASS    AA=A;DP=137     GT:GQ:DP        0|1:100:34      0|1:100:28      0|0:100:76
+17     15291228        rs2906984       T       C       .       PASS    AA=T;DP=146     GT:GQ:DP        0|1:100:34      0|1:100:30      0|0:100:83
+12     62125435        rs7954967       A       C       .       PASS    AA=A;DP=142     GT:GQ:DP        0|1:100:34      0|1:100:31      0|0:100:78
+1      94823316        rs841675        T       C       .       PASS    AA=T;DP=154;HM2;HM3     GT:GQ:DP        0|1:100:34      0|1:100:32      0|0:100:92
+7      147607238       rs6977768       C       A       .       PASS    AA=C;DP=144     GT:GQ:DP        0|1:100:34      0|1:100:33      0|0:100:78
+6      124277983       rs12530266      C       T       .       PASS    AA=T;DP=128     GT:GQ:DP        0|1:100:34      0|1:100:41      0|0:100:43
+7      17099104        rs10268527      T       G       .       PASS    AA=T;DP=121     GT:GQ:DP        0|1:100:34      0|1:26:16       0|0:93:32
+3      61703674        rs3817453       G       A       .       PASS    AA=g;DP=110     GT:GQ:DP        0|1:100:34      0|1:29:8        0|0:100:70
+11     20748345        rs327027        C       T       .       PASS    AA=c;DP=149     GT:GQ:DP        0|1:100:34      0|1:34:27       0|0:100:84
+19     40300972        rs2445827       C       T       .       PASS    AA=C;DP=124     GT:GQ:DP        0|1:100:34      0|1:46:17       0|0:100:71
+6      64921829        rs3013162       G       C       .       PASS    AA=C;DP=107     GT:GQ:DP        0|1:100:34      0|1:59:19       0|0:100:54
+12     14073988        .       T       G       .       PASS    AA=G;DP=130     GT:GQ:DP        0|1:100:34      0|1:61:17       0|0:96:33
+2      69991002        rs1979214       G       C       .       PASS    AA=G;DP=120     GT:GQ:DP        0|1:100:34      0|1:71:22       0|0:100:63
+5      16480726        rs29955 T       C       .       PASS    AA=C;DP=131     GT:GQ:DP        0|1:100:34      0|1:71:22       0|0:100:77
+2      20276935        rs3732163       C       T       .       PASS    AA=C;DP=108     GT:GQ:DP        0|1:100:34      0|1:74:14       0|0:100:61
+8      119465859       rs2450207       T       C       .       PASS    AA=T;DP=124     GT:GQ:DP        0|1:100:34      0|1:77:14       0|0:100:76
+16     71587553        rs7500197       G       A       .       PASS    AA=G;DP=91      GT:GQ:DP        0|1:100:34      0|1:79:12       0|0:96:33
+1      58846423        rs11811483      A       C       .       PASS    AA=C;DP=104     GT:GQ:DP        0|1:100:34      0|1:79:16       0|0:100:55
+7      131441523       rs188151        A       C       .       PASS    AA=C;DP=141     GT:GQ:DP        0|1:100:34      0|1:83:21       0|0:100:85
+19     45013364        rs7247063       C       A       .       PASS    AA=C;DP=157     GT:GQ:DP        0|1:100:34      0|1:84:23       0|0:100:56
+15     60173465        .       T       C       .       PASS    AA=T;DP=149     GT:GQ:DP        0|1:100:34      0|1:92:33       0|0:100:70
+7      125743578       rs481   C       A       .       PASS    AA=C;DP=161     GT:GQ:DP        0|1:100:34      0|1:93:28       0|0:100:47
+2      228521122       rs1524029       T       G       .       PASS    AA=T;DP=161     GT:GQ:DP        0|1:100:34      0|1:93:28       0|0:100:53
+3      29717808        .       T       G       .       PASS    AA=T;DP=146     GT:GQ:DP        0|1:100:34      0|1:96:14       0|0:100:52
+17     48460542        rs792773        G       T       .       PASS    AA=T;DP=142     GT:GQ:DP        0|1:100:34      1|1:100:35      0|1:100:75
+17     46191051        rs2159432       T       C       .       PASS    AA=T;DP=130     GT:GQ:DP        0|1:100:34      1|1:100:37      0|1:100:60
+1      78476493        rs720579        T       C       .       PASS    AA=C;DP=138     GT:GQ:DP        0|1:100:34      1|1:14:20       0|1:100:84
+16     2840716 rs11648457      A       G       .       PASS    AA=a;DP=116     GT:GQ:DP        0|1:100:34      1|1:27:10       0|1:100:68
+6      5702649 rs2326673       C       A       .       PASS    AA=A;DP=119     GT:GQ:DP        0|1:100:34      1|1:27:21       0|1:100:65
+3      13819962        rs56345182      T       G       .       PASS    AA=g;DP=121     GT:GQ:DP        0|1:100:34      1|1:30:11       0|1:100:77
+5      153742846       rs918509        T       C       .       PASS    AA=t;DP=142     GT:GQ:DP        0|1:100:34      1|1:36:22       0|1:100:87
+3      81250923        rs11127722      T       C       .       PASS    AA=C;DP=114     GT:GQ:DP        0|1:100:34      1|1:38:20       0|1:100:60
+1      119947406       rs4659015       C       A       .       PASS    AA=c;DP=126;HM2;HM3     GT:GQ:DP        0|1:100:34      1|1:41:26       0|1:100:66
+2      232164257       rs1865373       G       A       .       PASS    AA=A;DP=111     GT:GQ:DP        0|1:100:34      1|1:42:16       0|1:100:62
+5      10063651        rs434948        C       G       .       PASS    AA=C;DP=110     GT:GQ:DP        0|1:100:34      1|1:42:22       0|1:100:43
+15     83646852        rs7165242       G       T       .       PASS    AA=.;DP=152     GT:GQ:DP        0|1:100:34      1|1:42:25       0|1:100:46
+22     30376022        rs5998069       G       A       .       PASS    AA=A;DP=140     GT:GQ:DP        0|1:100:34      1|1:44:22       0|1:100:83
+10     73313070        rs4281413       C       T       .       PASS    AA=C;DP=116     GT:GQ:DP        0|1:100:34      1|1:45:16       0|1:100:66
+15     23661918        rs1553897       A       G       .       PASS    AA=G;DP=143     GT:GQ:DP        0|1:100:34      1|1:45:17       0|1:100:91
+20     59671083        rs11908152      G       A       .       PASS    AA=A;DP=131     GT:GQ:DP        0|1:100:34      1|1:45:19       0|1:100:79
+5      112395684       rs2080896       A       G       .       PASS    AA=A;DP=112     GT:GQ:DP        0|1:100:34      1|1:45:22       0|1:100:55
+20     51390570        rs200613        C       G       .       PASS    AA=G;DP=141     GT:GQ:DP        0|1:100:34      1|1:45:26       0|1:100:41
+5      123574675       rs6595511       T       G       .       PASS    AA=T;DP=111     GT:GQ:DP        0|1:100:34      1|1:48:17       0|1:100:60
+7      68671550        rs12671695      G       A       .       PASS    AA=g;DP=125     GT:GQ:DP        0|1:100:34      1|1:48:17       0|1:100:74
+4      178155139       rs17064016      G       A       .       PASS    AA=G;DP=124     GT:GQ:DP        0|1:100:34      1|1:48:18       0|1:100:70
+7      71388036        rs2203709       C       T       .       PASS    AA=T;DP=130     GT:GQ:DP        0|1:100:34      1|1:48:22       0|1:100:77
+5      60890827        rs1445978       T       C       .       PASS    AA=C;DP=123     GT:GQ:DP        0|1:100:34      1|1:54:19       0|1:100:71
+4      170420566       rs6817130       T       C       .       PASS    AA=C;DP=127     GT:GQ:DP        0|1:100:34      1|1:54:26       0|1:100:68
+7      50856556        rs6953726       A       C       .       PASS    AA=A;DP=121     GT:GQ:DP        0|1:100:34      1|1:57:20       0|1:100:65
+7      139093140       rs7790519       C       T       .       PASS    AA=T;DP=129     GT:GQ:DP        0|1:100:34      1|1:57:21       0|1:100:75
+20     60823116        rs2427411       A       G       .       PASS    AA=a;DP=135     GT:GQ:DP        0|1:100:34      1|1:57:22       0|1:100:76
+20     22255744        rs4815104       A       G       .       PASS    AA=G;DP=134     GT:GQ:DP        0|1:100:34      1|1:57:22       0|1:100:78
+7      151472312       rs3778919       A       G       .       PASS    AA=G;DP=137     GT:GQ:DP        0|1:100:34      1|1:57:26       0|1:100:77
+5      96513963        rs432482        C       T       .       PASS    AA=T;DP=136     GT:GQ:DP        0|1:100:34      1|1:58:28       0|1:100:74
+9      115484197       rs16907953      T       C       .       PASS    AA=T;DP=128     GT:GQ:DP        0|1:100:34      1|1:5:16        0|1:100:76
+2      222704953       rs11685017      C       T       .       PASS    AA=T;DP=143     GT:GQ:DP        0|1:100:34      1|1:60:21       0|1:100:45
+2      7430183 rs2195620       T       C       .       PASS    AA=C;DP=138     GT:GQ:DP        0|1:100:34      1|1:60:21       0|1:100:85
+22     34331515        rs4140603       T       C       .       PASS    AA=C;DP=145     GT:GQ:DP        0|1:100:34      1|1:60:21       0|1:100:90
+9      18698175        rs521911        G       T       .       PASS    AA=T;DP=122     GT:GQ:DP        0|1:100:34      1|1:63:23       0|1:100:68
+1      231535143       rs1294302       G       A       .       PASS    AA=A;DP=115;HM2;HM3     GT:GQ:DP        0|1:100:34      1|1:69:24       0|1:100:57
+5      165260999       rs1982325       T       C       .       PASS    AA=C;DP=125     GT:GQ:DP        0|1:100:34      1|1:69:24       0|1:100:67
+1      145229489       rs6665597       A       G       .       PASS    AA=A;DP=130;HM2;HM3     GT:GQ:DP        0|1:100:34      1|1:69:24       0|1:100:74
+16     78935705        rs3107212       A       G       .       PASS    AA=G;DP=121     GT:GQ:DP        0|1:100:34      1|1:72:25       0|1:100:62
+20     1405573 rs6042500       G       C       .       PASS    AA=g;DP=137     GT:GQ:DP        0|1:100:34      1|1:75:26       0|1:100:78
+5      77010537        rs351870        T       C       .       PASS    AA=T;DP=133     GT:GQ:DP        0|1:100:34      1|1:75:27       0|1:100:74
+8      33430740        rs10954913      T       C       .       PASS    AA=C;DP=125     GT:GQ:DP        0|1:100:34      1|1:78:27       0|1:100:65
+12     23612451        rs10842182      T       G       .       PASS    AA=G;DP=146     GT:GQ:DP        0|1:100:34      1|1:78:27       0|1:100:82
+7      140772065       rs1181731       T       C       .       PASS    AA=C;DP=119     GT:GQ:DP        0|1:100:34      1|1:78:28       0|1:100:59
+5      112936555       rs6867502       C       T       .       PASS    AA=T;DP=147     GT:GQ:DP        0|1:100:34      1|1:84:29       0|1:100:87
+9      123762419       rs7021247       A       T       .       PASS    AA=T;DP=152     GT:GQ:DP        0|1:100:34      1|1:87:32       0|1:100:83
+18     19218381        rs6507620       C       G       .       PASS    AA=G;DP=151     GT:GQ:DP        0|1:100:34      1|1:87:32       0|1:100:84
+11     76115518        rs7118639       T       C       .       PASS    AA=C;DP=122     GT:GQ:DP        0|1:100:34      1|1:90:31       0|1:100:58
+3      63267010        rs1874927       G       A       .       PASS    AA=A;DP=122     GT:GQ:DP        0|1:100:34      1|1:90:33       0|1:100:54
+1      164889982       rs12026187      T       C       .       PASS    AA=T;DP=162     GT:GQ:DP        0|1:100:35      0|0:100:33      0|0:100:41
+5      43452729        rs6864561       G       A       .       PASS    AA=G;DP=160     GT:GQ:DP        0|1:100:35      0|0:100:33      0|0:100:46
+11     15136660        .       A       C       .       PASS    AA=A;DP=142     GT:GQ:DP        0|1:100:35      0|0:100:34      0|0:100:74
+11     19171337        rs11025051      T       A       .       PASS    AA=T;DP=152     GT:GQ:DP        0|1:100:35      0|0:100:35      0|0:100:83
+3      112965535       rs12490337      G       C       .       PASS    AA=G;DP=156     GT:GQ:DP        0|1:100:35      0|0:100:35      0|0:100:86
+10     64327921        rs7908867       A       G       .       PASS    AA=G;DP=154     GT:GQ:DP        0|1:100:35      0|0:100:35      0|0:100:87
+3      60272421        rs28557335      T       C       .       PASS    AA=T;DP=144     GT:GQ:DP        0|1:100:35      0|0:100:36      0|0:100:73
+5      150467104       .       A       G       .       PASS    AA=A;DP=143     GT:GQ:DP        0|1:100:35      0|0:100:36      0|0:100:73
+17     59123835        .       A       G       .       PASS    AA=A;DP=167     GT:GQ:DP        0|1:100:35      0|0:100:37      0|0:100:55
+9      138810366       rs2784036       C       T       .       PASS    AA=C;DP=100     GT:GQ:DP        0|1:100:35      0|0:23:12       0|0:100:54
+11     72085625        rs11602233      C       A       .       PASS    AA=C;DP=134     GT:GQ:DP        0|1:100:35      0|0:24:19       0|0:100:82
+14     92622939        .       C       A       .       PASS    AA=C;DP=132     GT:GQ:DP        0|1:100:35      0|0:27:18       0|0:100:82
+12     106945878       rs11830861      C       T       .       PASS    AA=C;DP=127     GT:GQ:DP        0|1:100:35      0|0:29:19       0|0:100:73
+9      100986606       rs10988740      C       T       .       PASS    AA=T;DP=116     GT:GQ:DP        0|1:100:35      0|0:32:10       0|0:100:72
+3      57168594        .       G       A       .       PASS    AA=G;DP=114     GT:GQ:DP        0|1:100:35      0|0:32:15       0|0:100:63
+4      186057576       .       G       A       .       PASS    AA=G;DP=159     GT:GQ:DP        0|1:100:35      0|0:35:29       0|0:100:95
+6      150186694       rs9371201       C       T       .       PASS    AA=c;DP=138     GT:GQ:DP        0|1:100:35      0|0:38:11       0|0:100:47
+11     133865560       .       C       T       .       PASS    AA=N;DP=116     GT:GQ:DP        0|1:100:35      0|0:38:11       0|0:100:57
+14     100614684       .       C       G       .       PASS    AA=C;DP=132     GT:GQ:DP        0|1:100:35      0|0:38:11       0|0:100:86
+8      6501161 .       C       A       .       PASS    AA=C;DP=132     GT:GQ:DP        0|1:100:35      0|0:38:11       0|0:100:90
+4      57648035        rs4242004       C       A       .       PASS    AA=C;DP=132     GT:GQ:DP        0|1:100:35      0|0:38:17       0|0:100:39
+9      138096451       rs4842096       G       A       .       PASS    AA=G;DP=125     GT:GQ:DP        0|1:100:35      0|0:41:17       0|0:100:72
+5      80597843        .       T       A       .       PASS    AA=T;DP=113     GT:GQ:DP        0|1:100:35      0|0:41:23       0|0:100:53
+10     24816618        rs2065354       C       A       .       PASS    AA=A;DP=134     GT:GQ:DP        0|1:100:35      0|0:43:24       0|0:100:74
+7      87833087        rs10275463      G       T       .       PASS    AA=G;DP=96      GT:GQ:DP        0|1:100:35      0|0:44:23       0|0:84:28
+22     46554964        .       C       T       .       PASS    AA=T;DP=147     GT:GQ:DP        0|1:100:35      0|0:47:14       0|0:100:60
+21     39027961        rs11088440      T       C       .       PASS    AA=T;DP=137     GT:GQ:DP        0|1:100:35      0|0:47:18       0|0:100:46
+15     25584411        .       A       G       .       PASS    AA=A;DP=140     GT:GQ:DP        0|1:100:35      0|0:49:26       0|0:100:84
+20     45060340        rs59834749      C       T       .       PASS    AA=C;DP=148     GT:GQ:DP        0|1:100:35      0|0:49:26       0|0:100:88
+1      243477973       .       G       A       .       PASS    AA=A;DP=104     GT:GQ:DP        0|1:100:35      0|0:50:15       0|0:100:44
+14     89626295        rs11621541      G       A       .       PASS    AA=G;DP=115     GT:GQ:DP        0|1:100:35      0|0:50:16       0|0:100:49
+1      203746876       rs11240502      A       T       .       PASS    AA=T;DP=127;HM2 GT:GQ:DP        0|1:100:35      0|0:50:16       0|0:100:75
+17     72039884        .       C       T       .       PASS    AA=C;DP=150     GT:GQ:DP        0|1:100:35      0|0:50:17       0|0:100:56
+16     6208007 .       G       A       .       PASS    AA=G;DP=112     GT:GQ:DP        0|1:100:35      0|0:51:21       0|0:100:57
+5      134679476       rs55759857      C       T       .       PASS    AA=C;DP=132     GT:GQ:DP        0|1:100:35      0|0:51:27       0|0:100:70
+12     25963012        rs1495651       T       G       .       PASS    AA=T;DP=130     GT:GQ:DP        0|1:100:35      0|0:53:16       0|0:100:68
+10     115702056       .       A       G       .       PASS    AA=A;DP=133     GT:GQ:DP        0|1:100:35      0|0:53:17       0|0:94:40
+4      124768353       .       A       C       .       PASS    AA=A;DP=114     GT:GQ:DP        0|1:100:35      0|0:55:23       0|0:100:57
+2      136377392       .       G       A       .       PASS    AA=G;DP=140     GT:GQ:DP        0|1:100:35      0|0:56:17       0|0:100:48
+10     23333620        rs4748833       G       A       .       PASS    AA=G;DP=138     GT:GQ:DP        0|1:100:35      0|0:56:17       0|0:100:90
+5      163439646       .       G       A       .       PASS    AA=G;DP=117     GT:GQ:DP        0|1:100:35      0|0:56:18       0|0:100:64
+13     112866040       .       G       A       .       PASS    AA=G;DP=124     GT:GQ:DP        0|1:100:35      0|0:56:18       0|0:100:72
+4      37234043        rs2941010       G       C       .       PASS    AA=A;DP=138     GT:GQ:DP        0|1:100:35      0|0:56:18       0|0:100:86
+10     102212947       rs3793771       G       C       .       PASS    AA=C;DP=130     GT:GQ:DP        0|1:100:35      0|0:56:19       0|0:100:81
+8      98360209        .       T       A       .       PASS    AA=A;DP=128     GT:GQ:DP        0|1:100:35      0|0:56:23       0|0:100:76
+13     98197530        .       C       A       .       PASS    AA=C;DP=122     GT:GQ:DP        0|1:100:35      0|0:57:26       0|0:100:60
+10     15449822        .       C       T       .       PASS    AA=C;DP=139     GT:GQ:DP        0|1:100:35      0|0:58:25       0|0:100:79
+11     19419309        .       G       A       .       PASS    AA=G;DP=127     GT:GQ:DP        0|1:100:35      0|0:59:18       0|0:100:72
+8      23225084        .       G       C       .       PASS    AA=G;DP=108     GT:GQ:DP        0|1:100:35      0|0:59:19       0|0:100:41
+2      28614518        .       G       C       .       PASS    AA=G;DP=174     GT:GQ:DP        0|1:100:35      0|0:59:19       0|0:100:50
+3      80091871        rs58007196      A       G       .       PASS    AA=G;DP=119     GT:GQ:DP        0|1:100:35      0|0:59:19       0|0:100:68
+10     104476812       rs35094483      C       T       .       PASS    AA=C;DP=146     GT:GQ:DP        0|1:100:35      0|0:59:19       0|0:100:89
+8      6052746 rs62503929      G       T       .       PASS    AA=G;DP=136     GT:GQ:DP        0|1:100:35      0|0:60:29       0|0:100:75
+1      33865461        .       T       C       .       PASS    AA=C;DP=153     GT:GQ:DP        0|1:100:35      0|0:62:19       0|0:100:54
+2      109006374       rs6738129       T       C       .       PASS    AA=t;DP=125     GT:GQ:DP        0|1:100:35      0|0:62:19       0|0:100:71
+13     42933671        .       A       G       .       PASS    AA=A;DP=126     GT:GQ:DP        0|1:100:35      0|0:62:19       0|0:100:74
+6      90406943        rs6904681       G       C       .       PASS    AA=G;DP=123     GT:GQ:DP        0|1:100:35      0|0:62:20       0|0:100:70
+1      234869065       .       G       A       .       PASS    AA=G;DP=142     GT:GQ:DP        0|1:100:35      0|0:62:21       0|0:100:73
+9      118531199       rs56283051      G       A       .       PASS    AA=G;DP=130     GT:GQ:DP        0|1:100:35      0|0:62:21       0|0:100:74
+1      185805177       rs2789393       C       T       .       PASS    AA=T;DP=137;HM2;HM3     GT:GQ:DP        0|1:100:35      0|0:62:26       0|0:100:79
+13     100956467       .       C       A       .       PASS    AA=C;DP=149     GT:GQ:DP        0|1:100:35      0|0:63:31       0|0:100:87
+15     39290320        .       C       A       .       PASS    AA=A;DP=125     GT:GQ:DP        0|1:100:35      0|0:64:26       0|0:100:64
+6      166118078       rs6912860       T       A       .       PASS    AA=A;DP=138     GT:GQ:DP        0|1:100:35      0|0:65:20       0|0:100:39
+2      216128295       rs1320135       T       C       .       PASS    AA=T;DP=119     GT:GQ:DP        0|1:100:35      0|0:65:20       0|0:100:65
+1      202263585       .       G       A       .       PASS    AA=G;DP=124     GT:GQ:DP        0|1:100:35      0|0:65:21       0|0:100:68
+13     99043248        rs1570736       G       A       .       PASS    AA=G;DP=127     GT:GQ:DP        0|1:100:35      0|0:65:21       0|0:100:71
+9      30271061        rs13292337      C       T       .       PASS    AA=C;DP=136     GT:GQ:DP        0|1:100:35      0|0:65:21       0|0:100:78
+5      238092  rs6554946       C       T       .       PASS    AA=C;DP=141     GT:GQ:DP        0|1:100:35      0|0:65:21       0|0:100:82
+8      136955885       .       C       T       .       PASS    AA=c;DP=144     GT:GQ:DP        0|1:100:35      0|0:65:21       0|0:100:89
+17     14466303        rs1019154       A       G       .       PASS    AA=G;DP=133     GT:GQ:DP        0|1:100:35      0|0:65:22       0|0:100:78
+6      144653274       rs2502639       C       G       .       PASS    AA=C;DP=157     GT:GQ:DP        0|1:100:35      0|0:65:23       0|0:100:51
+13     38835490        .       T       C       .       PASS    AA=t;DP=149     GT:GQ:DP        0|1:100:35      0|0:66:30       0|0:100:86
+15     74019477        rs10444856      T       C       .       PASS    AA=T;DP=142     GT:GQ:DP        0|1:100:35      0|0:67:27       0|0:100:40
+7      153898383       rs10240448      A       G       .       PASS    AA=A;DP=112     GT:GQ:DP        0|1:100:35      0|0:68:21       0|0:100:56
+12     131231588       .       C       T       .       PASS    AA=C;DP=160     GT:GQ:DP        0|1:100:35      0|0:68:21       0|0:100:57
+16     55495745        rs12708966      G       A       .       PASS    AA=G;DP=165     GT:GQ:DP        0|1:100:35      0|0:68:21       0|0:100:61
+1      19623482        .       G       A       .       PASS    AA=G;DP=127     GT:GQ:DP        0|1:100:35      0|0:68:21       0|0:100:70
+16     72117142        .       G       T       .       PASS    AA=G;DP=138     GT:GQ:DP        0|1:100:35      0|0:68:21       0|0:100:83
+3      152029278       .       T       C       .       PASS    AA=T;DP=154     GT:GQ:DP        0|1:100:35      0|0:68:21       0|0:100:98
+19     46943058        .       G       A       .       PASS    AA=.;DP=152     GT:GQ:DP        0|1:100:35      0|0:68:22       0|0:100:50
+22     43301744        rs4823330       G       A       .       PASS    AA=G;DP=150     GT:GQ:DP        0|1:100:35      0|0:68:22       0|0:100:54
+6      135251021       .       G       C       .       PASS    AA=G;DP=123     GT:GQ:DP        0|1:100:35      0|0:68:22       0|0:100:68
+13     29599259        rs58400270      C       T       .       PASS    AA=C;DP=140     GT:GQ:DP        0|1:100:35      0|0:68:22       0|0:100:83
+1      10557373        .       G       A       .       PASS    AA=A;DP=130     GT:GQ:DP        0|1:100:35      0|0:68:23       0|0:100:71
+8      140402970       .       T       C       .       PASS    AA=T;DP=134     GT:GQ:DP        0|1:100:35      0|0:68:23       0|0:100:77
+8      72100690        rs3110256       A       G       .       PASS    AA=A;DP=139     GT:GQ:DP        0|1:100:35      0|0:68:23       0|0:100:82
+1      234599102       .       A       G       .       PASS    AA=A;DP=136     GT:GQ:DP        0|1:100:35      0|0:68:25       0|0:100:76
+15     42128417        .       G       T       .       PASS    AA=g;DP=152     GT:GQ:DP        0|1:100:35      0|0:70:28       0|0:100:46
+10     24402272        .       G       A       .       PASS    AA=G;DP=116     GT:GQ:DP        0|1:100:35      0|0:71:22       0|0:100:58
+10     61718399        .       T       G       .       PASS    AA=T;DP=117     GT:GQ:DP        0|1:100:35      0|0:71:22       0|0:100:63
+8      119160163       rs17506037      T       C       .       PASS    AA=T;DP=122     GT:GQ:DP        0|1:100:35      0|0:71:22       0|0:100:65
+11     71999938        rs11824863      C       T       .       PASS    AA=C;DP=171     GT:GQ:DP        0|1:100:35      0|0:71:22       0|0:100:67
+3      142011043       rs9835982       T       G       .       PASS    AA=G;DP=139     GT:GQ:DP        0|1:100:35      0|0:71:22       0|0:100:85
+12     63788725        rs12810270      G       T       .       PASS    AA=G;DP=145     GT:GQ:DP        0|1:100:35      0|0:71:22       0|0:100:89
+4      9856675 rs11939276      G       A       .       PASS    AA=N;DP=156     GT:GQ:DP        0|1:100:35      0|0:71:23       0|0:100:59
+6      18077722        .       G       A       .       PASS    AA=G;DP=127     GT:GQ:DP        0|1:100:35      0|0:71:23       0|0:100:70
+12     95669765        rs10507080      T       C       .       PASS    AA=T;DP=143     GT:GQ:DP        0|1:100:35      0|0:71:23       0|0:100:85
+6      154905280       .       A       G       .       PASS    AA=G;DP=131     GT:GQ:DP        0|1:100:35      0|0:72:28       0|0:100:68
+3      132048194       rs2760260       C       T       .       PASS    AA=T;DP=150     GT:GQ:DP        0|1:100:35      0|0:72:29       0|0:100:42
+21     45291113        .       C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        0|1:100:35      0|0:74:23       0|0:100:56
+9      15497907        rs926155        T       C       .       PASS    AA=T;DP=124     GT:GQ:DP        0|1:100:35      0|0:74:23       0|0:100:68
+3      81303044        rs35332353      G       A       .       PASS    AA=A;DP=126     GT:GQ:DP        0|1:100:35      0|0:74:23       0|0:100:71
+4      26660507        rs16878733      C       T       .       PASS    AA=C;DP=129     GT:GQ:DP        0|1:100:35      0|0:74:23       0|0:100:72
+7      16478547        rs12669600      G       A       .       PASS    AA=G;DP=144     GT:GQ:DP        0|1:100:35      0|0:74:23       0|0:100:86
+13     86281437        .       G       A       .       PASS    AA=G;DP=130     GT:GQ:DP        0|1:100:35      0|0:74:24       0|0:100:71
+15     44632328        rs1516850       C       T       .       PASS    AA=C;DP=148     GT:GQ:DP        0|1:100:35      0|0:74:24       0|0:100:85
+8      5446053 .       G       T       .       PASS    AA=G;DP=135     GT:GQ:DP        0|1:100:35      0|0:77:24       0|0:100:37
+16     73357955        rs28475834      C       G       .       PASS    AA=c;DP=142     GT:GQ:DP        0|1:100:35      0|0:77:24       0|0:100:44
+1      19991682        .       T       C       .       PASS    AA=t;DP=124     GT:GQ:DP        0|1:100:35      0|0:77:24       0|0:100:62
+4      54941040        rs6812505       G       C       .       PASS    AA=G;DP=136     GT:GQ:DP        0|1:100:35      0|0:77:24       0|0:100:78
+4      122861002       rs6857690       C       T       .       PASS    AA=T;DP=140     GT:GQ:DP        0|1:100:35      0|0:77:24       0|0:100:84
+4      54882889        .       A       T       .       PASS    AA=T;DP=144     GT:GQ:DP        0|1:100:35      0|0:77:24       0|0:100:85
+1      203552042       rs11805405      C       T       .       PASS    AA=T;DP=145     GT:GQ:DP        0|1:100:35      0|0:77:24       0|0:100:86
+5      81209930        rs2897524       G       A       .       PASS    AA=G;DP=138     GT:GQ:DP        0|1:100:35      0|0:77:25       0|0:100:77
+5      135067689       rs4613698       G       A       .       PASS    AA=G;DP=149     GT:GQ:DP        0|1:100:35      0|0:77:25       0|0:100:91
+6      26448341        .       C       A       .       PASS    AA=C;DP=146     GT:GQ:DP        0|1:100:35      0|0:77:30       0|0:100:84
+5      97807503        .       T       G       .       PASS    AA=T;DP=166     GT:GQ:DP        0|1:100:35      0|0:77:32       0|0:100:48
+14     68251721        rs4902633       T       C       .       PASS    AA=T;DP=185     GT:GQ:DP        0|1:100:35      0|0:78:36       0|0:100:61
+7      119989407       .       A       T       .       PASS    AA=A;DP=118     GT:GQ:DP        0|1:100:35      0|0:80:25       0|0:100:60
+6      125246551       rs12210673      T       G       .       PASS    AA=T;DP=127     GT:GQ:DP        0|1:100:35      0|0:80:25       0|0:100:65
+10     98008263        .       T       C       .       PASS    AA=T;DP=127     GT:GQ:DP        0|1:100:35      0|0:80:25       0|0:100:67
+14     77073637        .       T       C       .       PASS    AA=T;DP=130     GT:GQ:DP        0|1:100:35      0|0:80:25       0|0:100:68
+20     16695544        rs6044299       A       G       .       PASS    AA=G;DP=135     GT:GQ:DP        0|1:100:35      0|0:80:25       0|0:100:75
+4      53059761        .       G       T       .       PASS    AA=g;DP=156     GT:GQ:DP        0|1:100:35      0|0:80:28       0|0:100:52
+4      36501168        .       A       T       .       PASS    AA=A;DP=170     GT:GQ:DP        0|1:100:35      0|0:80:31       0|0:100:61
+19     22113562        .       T       G       .       PASS    AA=T;DP=168     GT:GQ:DP        0|1:100:35      0|0:82:31       0|0:100:101
+11     64120867        rs475688        C       T       .       PASS    AA=C;DP=151     GT:GQ:DP        0|1:100:35      0|0:83:26       0|0:100:87
+4      37890227        .       T       C       .       PASS    AA=T;DP=140     GT:GQ:DP        0|1:100:35      0|0:83:27       0|0:100:78
+3      124761382       .       G       A       .       PASS    AA=G;DP=149     GT:GQ:DP        0|1:100:35      0|0:83:27       0|0:100:83
+1      86813407        .       C       T       .       PASS    AA=C;DP=135     GT:GQ:DP        0|1:100:35      0|0:83:28       0|0:100:59
+16     80910440        rs9940499       C       A       .       PASS    AA=C;DP=135     GT:GQ:DP        0|1:100:35      0|0:83:28       0|0:100:74
+3      41157911        .       T       A       .       PASS    AA=T;DP=133     GT:GQ:DP        0|1:100:35      0|0:86:27       0|0:100:74
+6      33201942        rs9277750       T       G       .       PASS    AA=t;DP=141     GT:GQ:DP        0|1:100:35      0|0:86:27       0|0:100:81
+2      222502019       .       C       T       .       PASS    AA=C;DP=140     GT:GQ:DP        0|1:100:35      0|0:86:28       0|0:100:77
+2      105317254       .       G       A       .       PASS    AA=G;DP=144     GT:GQ:DP        0|1:100:35      0|0:86:28       0|0:100:82
+17     38980878        .       G       A       .       PASS    AA=G;DP=131     GT:GQ:DP        0|1:100:35      0|0:86:29       0|0:100:52
+22     32942525        .       C       G       .       PASS    AA=C;DP=146     GT:GQ:DP        0|1:100:35      0|0:89:28       0|0:100:80
+2      46938917        .       C       T       .       PASS    AA=C;DP=157     GT:GQ:DP        0|1:100:35      0|0:89:28       0|0:100:94
+7      9280744 .       T       C       .       PASS    AA=T;DP=149     GT:GQ:DP        0|1:100:35      0|0:89:29       0|0:100:47
+11     34547529        rs11600055      C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        0|1:100:35      0|0:89:29       0|0:100:55
+1      60522612        .       C       T       .       PASS    AA=C;DP=133     GT:GQ:DP        0|1:100:35      0|0:89:29       0|0:100:72
+5      92361092        .       T       G       .       PASS    AA=t;DP=137     GT:GQ:DP        0|1:100:35      0|0:89:29       0|0:100:72
+3      186263870       .       T       A       .       PASS    AA=T;DP=150     GT:GQ:DP        0|1:100:35      0|0:89:30       0|0:100:87
+22     26000885        rs47808 C       T       .       PASS    AA=C;DP=165     GT:GQ:DP        0|1:100:35      0|0:90:35       0|0:100:95
+6      25997685        rs9467632       A       G       .       PASS    AA=A;DP=134     GT:GQ:DP        0|1:100:35      0|0:92:29       0|0:100:66
+4      133507699       .       G       A       .       PASS    AA=A;DP=136     GT:GQ:DP        0|1:100:35      0|0:92:29       0|0:100:72
+9      100175942       .       T       A       .       PASS    AA=T;DP=155     GT:GQ:DP        0|1:100:35      0|0:92:30       0|0:100:91
+9      96554495        rs60048957      A       G       .       PASS    AA=A;DP=137     GT:GQ:DP        0|1:100:35      0|0:92:33       0|0:100:71
+4      19795934        .       A       G       .       PASS    AA=A;DP=128     GT:GQ:DP        0|1:100:35      0|0:95:30       0|0:100:65
+9      112143947       rs10816978      G       A       .       PASS    AA=G;DP=132     GT:GQ:DP        0|1:100:35      0|0:95:30       0|0:100:69
+12     128686079       rs10773689      C       A       .       PASS    AA=C;DP=138     GT:GQ:DP        0|1:100:35      0|0:95:30       0|0:100:74
+9      4788087 .       C       A       .       PASS    AA=C;DP=146     GT:GQ:DP        0|1:100:35      0|0:95:30       0|0:100:82
+4      189821917       rs1916261       A       G       .       PASS    AA=A;DP=160     GT:GQ:DP        0|1:100:35      0|0:95:31       0|0:100:57
+4      56149593        .       T       A       .       PASS    AA=T;DP=151     GT:GQ:DP        0|1:100:35      0|0:96:34       0|0:100:85
+20     15856461        .       T       G       .       PASS    AA=T;DP=156     GT:GQ:DP        0|1:100:35      0|0:98:32       0|0:100:88
+10     112562920       rs1417634       G       A       .       PASS    AA=A;DP=158     GT:GQ:DP        0|1:100:35      0|0:98:32       0|0:100:90
+10     95381388        rs12049686      C       T       .       PASS    AA=C;DP=105     GT:GQ:DP        0|1:100:35      0|1:100:14      0|0:100:46
+12     106433695       rs11835314      A       G       .       PASS    AA=G;DP=119     GT:GQ:DP        0|1:100:35      0|1:100:16      0|0:100:70
+6      158332507       rs10455936      C       T       .       PASS    AA=C;DP=127     GT:GQ:DP        0|1:100:35      0|1:100:17      0|0:100:75
+1      160244869       .       C       T       .       PASS    AA=C;DP=114     GT:GQ:DP        0|1:100:35      0|1:100:21      0|0:100:59
+20     22462621        rs6048169       C       T       .       PASS    AA=C;DP=127     GT:GQ:DP        0|1:100:35      0|1:100:21      0|0:100:72
+3      109327933       rs326348        T       C       .       PASS    AA=C;DP=121     GT:GQ:DP        0|1:100:35      0|1:100:22      0|0:100:65
+5      36109999        rs267785        A       G       .       PASS    AA=G;DP=125     GT:GQ:DP        0|1:100:35      0|1:100:22      0|0:100:72
+3      184574384       rs4859176       G       A       .       PASS    AA=G;DP=139     GT:GQ:DP        0|1:100:35      0|1:100:22      0|0:100:84
+2      112814911       .       T       C       .       PASS    AA=.;DP=149     GT:GQ:DP        0|1:100:35      0|1:100:22      0|0:100:92
+2      242469841       rs10177754      G       A       .       PASS    AA=.;DP=153     GT:GQ:DP        0|1:100:35      0|1:100:23      0|0:100:50
+9      21920505        rs10965187      G       A       .       PASS    AA=G;DP=136     GT:GQ:DP        0|1:100:35      0|1:100:23      0|0:100:79
+2      105916807       rs12466260      G       A       .       PASS    AA=G;DP=138     GT:GQ:DP        0|1:100:35      0|1:100:25      0|0:100:37
+12     102598450       rs10778277      A       T       .       PASS    AA=T;DP=140     GT:GQ:DP        0|1:100:35      0|1:100:25      0|0:100:81
+5      73298765        rs450853        T       C       .       PASS    AA=C;DP=136     GT:GQ:DP        0|1:100:35      0|1:100:25      0|0:99:35
+2      142248184       rs7590602       G       A       .       PASS    AA=G;DP=132     GT:GQ:DP        0|1:100:35      0|1:100:26      0|0:93:32
+4      108706622       rs1399404       C       G       .       PASS    AA=C;DP=156     GT:GQ:DP        0|1:100:35      0|1:100:27      0|0:100:56
+14     48226499        rs12586387      C       T       .       PASS    AA=C;DP=124     GT:GQ:DP        0|1:100:35      0|1:100:27      0|0:100:66
+9      130441754       .       T       G       .       PASS    AA=T;DP=154     GT:GQ:DP        0|1:100:35      0|1:100:27      0|0:100:98
+5      87631701        rs16903063      A       G       .       PASS    AA=A;DP=158     GT:GQ:DP        0|1:100:35      0|1:100:28      0|0:100:54
+4      5576627 rs3821921       G       A       .       PASS    AA=g;DP=134     GT:GQ:DP        0|1:100:35      0|1:100:28      0|0:100:71
+3      53738263        .       A       G       .       PASS    AA=A;DP=155     GT:GQ:DP        0|1:100:35      0|1:100:28      0|0:100:92
+20     16326925        rs11907528      C       G       .       PASS    AA=C;DP=170     GT:GQ:DP        0|1:100:35      0|1:100:30      0|0:100:59
+20     19919112        rs199604        G       A       .       PASS    AA=G;DP=171     GT:GQ:DP        0|1:100:35      0|1:100:30      0|0:100:65
+3      109144109       rs1370284       G       A       .       PASS    AA=G;DP=140     GT:GQ:DP        0|1:100:35      0|1:100:30      0|0:100:67
+12     4319515 rs7134591       G       A       .       PASS    AA=A;DP=148     GT:GQ:DP        0|1:100:35      0|1:100:30      0|0:100:83
+2      167172983       rs13393241      A       G       .       PASS    AA=G;DP=142     GT:GQ:DP        0|1:100:35      0|1:100:30      0|0:84:31
+19     42865254        rs28431170      G       A       .       PASS    AA=g;DP=140     GT:GQ:DP        0|1:100:35      0|1:100:30      0|0:93:32
+13     26778846        rs17085414      T       C       .       PASS    AA=C;DP=167     GT:GQ:DP        0|1:100:35      0|1:100:31      0|0:100:102
+22     30465812        rs11705329      G       A       .       PASS    AA=A;DP=157     GT:GQ:DP        0|1:100:35      0|1:100:31      0|0:100:90
+6      1029481 rs10081088      G       A       .       PASS    AA=G;DP=161     GT:GQ:DP        0|1:100:35      0|1:100:32      0|0:100:97
+11     115369475       rs12285018      C       G       .       PASS    AA=G;DP=184     GT:GQ:DP        0|1:100:35      0|1:100:35      0|0:100:54
+22     35581407        rs5995355       A       G       .       PASS    AA=N;DP=141     GT:GQ:DP        0|1:100:35      0|1:100:37      0|0:100:69
+1      37669496        rs61780477      A       G       .       PASS    AA=A;DP=120     GT:GQ:DP        0|1:100:35      0|1:44:13       0|0:100:73
+11     82945618        rs501139        A       G       .       PASS    AA=G;DP=133     GT:GQ:DP        0|1:100:35      0|1:50:22       0|0:100:78
+14     101407012       rs7161302       C       G       .       PASS    AA=C;DP=137     GT:GQ:DP        0|1:100:35      0|1:73:19       0|0:100:86
+5      8956415 rs7717614       G       C       .       PASS    AA=G;DP=141     GT:GQ:DP        0|1:100:35      0|1:73:31       0|0:100:81
+10     13544712        rs4237432       T       C       .       PASS    AA=T;DP=133     GT:GQ:DP        0|1:100:35      0|1:80:21       0|0:100:77
+8      107602568       rs16874819      G       A       .       PASS    AA=G;DP=120     GT:GQ:DP        0|1:100:35      0|1:84:21       0|0:100:66
+4      153027826       rs244403        T       G       .       PASS    AA=G;DP=139     GT:GQ:DP        0|1:100:35      0|1:85:19       0|0:100:87
+18     43776812        rs12959824      G       A       .       PASS    AA=G;DP=163     GT:GQ:DP        0|1:100:35      0|1:85:29       0|0:100:44
+16     78461530        rs10514469      A       T       .       PASS    AA=A;DP=137     GT:GQ:DP        0|1:100:35      0|1:89:25       0|0:100:80
+10     37922411        rs9733309       G       A       .       PASS    AA=g;DP=151     GT:GQ:DP        0|1:100:35      0|1:89:28       0|0:100:88
+6      143262336       rs7749585       C       T       .       PASS    AA=C;DP=166     GT:GQ:DP        0|1:100:35      0|1:89:34       0|0:100:96
+9      135647525       rs10993802      G       A       .       PASS    AA=A;DP=120     GT:GQ:DP        0|1:100:35      0|1:94:12       0|0:96:33
+6      32806025        rs9276146       A       G       .       PASS    AA=N;DP=131     GT:GQ:DP        0|1:100:35      0|1:98:31       0|0:100:64
+1      235483513       rs10925352      C       T       .       PASS    AA=T;DP=142;HM2;HM3     GT:GQ:DP        0|1:100:35      1|1:100:38      0|1:100:70
+18     45656587        rs645644        G       A       .       PASS    AA=A;DP=176     GT:GQ:DP        0|1:100:35      1|1:100:40      0|1:100:54
+20     41457275        rs2007333       A       G       .       PASS    AA=G;DP=105     GT:GQ:DP        0|1:100:35      1|1:20:18       0|1:100:40
+14     33677115        .       T       C       .       PASS    AA=T;DP=105     GT:GQ:DP        0|1:100:35      1|1:22:17       0|1:100:43
+8      52097286        rs7841979       C       T       .       PASS    AA=T;DP=123     GT:GQ:DP        0|1:100:35      1|1:23:18       0|1:100:69
+7      103434858       .       A       T       .       PASS    AA=A;DP=142     GT:GQ:DP        0|1:100:35      1|1:29:21       0|1:100:87
+5      129453681       rs60947206      A       G       .       PASS    AA=a;DP=146     GT:GQ:DP        0|1:100:35      1|1:32:25       0|1:100:84
+11     16656395        rs4756862       G       A       .       PASS    AA=A;DP=117     GT:GQ:DP        0|1:100:35      1|1:33:12       0|1:100:70
+8      143238302       rs60347109      A       G       .       PASS    AA=G;DP=119     GT:GQ:DP        0|1:100:35      1|1:33:12       0|1:100:72
+16     74064197        rs977986        T       G       .       PASS    AA=T;DP=130     GT:GQ:DP        0|1:100:35      1|1:33:13       0|1:100:85
+14     21873332        rs12432181      A       G       .       PASS    AA=G;DP=129     GT:GQ:DP        0|1:100:35      1|1:36:22       0|1:100:72
+11     69553120        rs10793254      A       C       .       PASS    AA=C;DP=109     GT:GQ:DP        0|1:100:35      1|1:39:14       0|1:100:59
+2      218527772       rs3791891       C       T       .       PASS    AA=T;DP=119     GT:GQ:DP        0|1:100:35      1|1:40:23       0|1:100:55
+8      6457887 rs3020256       C       G       .       PASS    AA=G;DP=146     GT:GQ:DP        0|1:100:35      1|1:45:16       0|1:100:52
+5      205209  rs7706965       C       T       .       PASS    AA=.;DP=125     GT:GQ:DP        0|1:100:35      1|1:48:17       0|1:100:64
+7      156925429       rs9690548       T       C       .       PASS    AA=N;DP=115     GT:GQ:DP        0|1:100:35      1|1:48:17       0|1:100:65
+10     50044324        rs12771123      A       G       .       PASS    AA=A;DP=130     GT:GQ:DP        0|1:100:35      1|1:48:18       0|1:100:78
+13     101341004       rs9557751       A       G       .       PASS    AA=G;DP=144     GT:GQ:DP        0|1:100:35      1|1:48:18       0|1:100:91
+2      54980995        rs10195230      C       T       .       PASS    AA=C;DP=121     GT:GQ:DP        0|1:100:35      1|1:54:19       0|1:100:68
+10     126350492       rs4962682       C       T       .       PASS    AA=C;DP=155     GT:GQ:DP        0|1:100:35      1|1:54:20       0|1:100:60
+18     57061006        rs981956        G       T       .       PASS    AA=G;DP=144     GT:GQ:DP        0|1:100:35      1|1:54:27       0|1:100:42
+1      116206319       rs1498116       G       A       .       PASS    AA=N;DP=107;HM2;HM3     GT:GQ:DP        0|1:100:35      1|1:57:20       0|1:100:52
+20     55748045        rs6015071       A       G       .       PASS    AA=a;DP=123     GT:GQ:DP        0|1:100:35      1|1:63:23       0|1:100:63
+22     27634253        rs132539        T       C       .       PASS    AA=C;DP=134     GT:GQ:DP        0|1:100:35      1|1:63:23       0|1:100:78
+7      139662180       rs6952838       G       A       .       PASS    AA=G;DP=145     GT:GQ:DP        0|1:100:35      1|1:66:23       0|1:100:50
+2      8384895 rs3102956       A       G       .       PASS    AA=a;DP=139     GT:GQ:DP        0|1:100:35      1|1:66:23       0|1:100:82
+11     12154048        rs7122994       C       T       .       PASS    AA=T;DP=162     GT:GQ:DP        0|1:100:35      1|1:69:25       0|1:100:103
+1      12595212        rs12044197      T       C       .       PASS    AA=C;DP=150     GT:GQ:DP        0|1:100:35      1|1:75:26       0|1:100:44
+5      14125315        rs10074855      C       T       .       PASS    AA=T;DP=147     GT:GQ:DP        0|1:100:35      1|1:75:26       0|1:100:79
+10     131400283       rs4751115       T       C       .       PASS    AA=C;DP=131     GT:GQ:DP        0|1:100:35      1|1:75:27       0|1:100:68
+19     38707046        rs33846 A       C       .       PASS    AA=A;DP=140     GT:GQ:DP        0|1:100:35      1|1:7:13        0|1:100:91
+14     58212301        rs182579        T       C       .       PASS    AA=T;DP=122     GT:GQ:DP        0|1:100:35      1|1:81:30       0|1:100:58
+20     16259310        rs2208059       T       C       .       PASS    AA=C;DP=140     GT:GQ:DP        0|1:100:35      1|1:87:32       0|1:100:72
+7      30727944        rs255151        G       A       .       PASS    AA=A;DP=154     GT:GQ:DP        0|1:100:35      1|1:90:32       0|1:100:87
+5      107959351       rs10077221      C       T       .       PASS    AA=C;DP=155     GT:GQ:DP        0|1:100:35      1|1:99:34       0|1:100:85
+10     42996652        .       G       A       .       PASS    AA=A;DP=144     GT:GQ:DP        0|1:100:36      0|0:100:32      0|0:100:74
+7      29068833        rs317711        C       G       .       PASS    AA=G;DP=153     GT:GQ:DP        0|1:100:36      0|0:100:32      0|0:100:82
+14     98356398        .       T       C       .       PASS    AA=T;DP=167     GT:GQ:DP        0|1:100:36      0|0:100:33      0|0:100:52
+15     86242577        rs7170498       G       C       .       PASS    AA=G;DP=141     GT:GQ:DP        0|1:100:36      0|0:100:33      0|0:100:69
+10     1803903 .       G       C       .       PASS    AA=G;DP=142     GT:GQ:DP        0|1:100:36      0|0:100:33      0|0:100:72
+8      136034532       rs12680218      T       A       .       PASS    AA=T;DP=144     GT:GQ:DP        0|1:100:36      0|0:100:33      0|0:100:74
+2      135462192       rs10928526      A       G       .       PASS    AA=G;DP=144     GT:GQ:DP        0|1:100:36      0|0:100:34      0|0:100:75
+18     47043069        rs16953028      G       A       .       PASS    AA=G;DP=156     GT:GQ:DP        0|1:100:36      0|0:100:34      0|0:100:87
+13     28134346        rs1340816       A       T       .       PASS    AA=T;DP=132     GT:GQ:DP        0|1:100:36      0|0:100:35      0|0:100:62
+4      79424862        rs1958276       G       A       .       PASS    AA=G;DP=144     GT:GQ:DP        0|1:100:36      0|0:100:38      0|0:100:71
+2      193884081       rs13426933      C       T       .       PASS    AA=C;DP=124     GT:GQ:DP        0|1:100:36      0|0:27:15       0|0:100:75
+1      58099682        rs1886138       C       T       .       PASS    AA=C;DP=114;HM2 GT:GQ:DP        0|1:100:36      0|0:28:16       0|0:100:61
+4      187741916       .       C       T       .       PASS    AA=C;DP=137     GT:GQ:DP        0|1:100:36      0|0:32:9        0|0:100:50
+15     60924741        .       C       A       .       PASS    AA=C;DP=133     GT:GQ:DP        0|1:100:36      0|0:39:15       0|0:100:83
+19     8068971 rs8104517       T       C       .       PASS    AA=T;DP=131     GT:GQ:DP        0|1:100:36      0|0:41:13       0|0:100:77
+8      75766155        rs55806120      A       T       .       PASS    AA=A;DP=143     GT:GQ:DP        0|1:100:36      0|0:41:23       0|0:100:84
+4      11515636        .       T       C       .       PASS    AA=T;DP=151     GT:GQ:DP        0|1:100:36      0|0:42:21       0|0:100:87
+19     444029  .       T       A       .       PASS    AA=t;DP=108     GT:GQ:DP        0|1:100:36      0|0:44:13       0|0:100:61
+19     57495036        .       T       C       .       PASS    AA=.;DP=116     GT:GQ:DP        0|1:100:36      0|0:44:13       0|0:100:68
+14     93338209        rs7149972       A       G       .       PASS    AA=G;DP=144     GT:GQ:DP        0|1:100:36      0|0:46:23       0|0:100:87
+4      160745617       .       G       T       .       PASS    AA=G;DP=145     GT:GQ:DP        0|1:100:36      0|0:46:24       0|0:100:87
+16     22067194        .       G       A       .       PASS    AA=g;DP=99      GT:GQ:DP        0|1:100:36      0|0:47:15       0|0:100:50
+3      102374158       rs2627551       G       C       .       PASS    AA=G;DP=128     GT:GQ:DP        0|1:100:36      0|0:47:17       0|0:100:38
+3      24378701        rs59516705      C       T       .       PASS    AA=C;DP=131     GT:GQ:DP        0|1:100:36      0|0:49:26       0|0:100:71
+3      129789013       rs4857910       C       T       .       PASS    AA=C;DP=111     GT:GQ:DP        0|1:100:36      0|0:50:15       0|0:100:48
+16     10968567        .       T       G       .       PASS    AA=T;DP=119     GT:GQ:DP        0|1:100:36      0|0:50:16       0|0:100:69
+5      95686412        .       C       T       .       PASS    AA=C;DP=123     GT:GQ:DP        0|1:100:36      0|0:50:16       0|0:100:70
+13     109646188       rs7996925       C       T       .       PASS    AA=T;DP=133     GT:GQ:DP        0|1:100:36      0|0:50:16       0|0:79:38
+6      54797212        rs10948858      G       T       .       PASS    AA=G;DP=127     GT:GQ:DP        0|1:100:36      0|0:51:21       0|0:100:71
+8      144736905       rs4874157       G       A       .       PASS    AA=G;DP=127     GT:GQ:DP        0|1:100:36      0|0:53:16       0|0:100:73
+12     14755217        rs1468858       G       A       .       PASS    AA=G;DP=154     GT:GQ:DP        0|1:100:36      0|0:53:19       0|0:100:52
+19     44758659        rs7251932       A       T       .       PASS    AA=N;DP=116     GT:GQ:DP        0|1:100:36      0|0:53:20       0|0:100:63
+7      3013274 .       G       A       .       PASS    AA=G;DP=137     GT:GQ:DP        0|1:100:36      0|0:53:21       0|0:100:36
+10     117127721       .       A       C       .       PASS    AA=A;DP=164     GT:GQ:DP        0|1:100:36      0|0:53:22       0|0:100:60
+10     17174097        .       C       A       .       PASS    AA=C;DP=151     GT:GQ:DP        0|1:100:36      0|0:53:24       0|0:100:91
+2      566665  .       G       T       .       PASS    AA=G;DP=140     GT:GQ:DP        0|1:100:36      0|0:55:28       0|0:100:75
+8      11539543        rs2252540       A       G       .       PASS    AA=a;DP=116     GT:GQ:DP        0|1:100:36      0|0:56:17       0|0:100:52
+10     80621313        .       G       A       .       PASS    AA=G;DP=127     GT:GQ:DP        0|1:100:36      0|0:56:17       0|0:100:75
+12     11778331        .       C       T       .       PASS    AA=C;DP=132     GT:GQ:DP        0|1:100:36      0|0:56:17       0|0:88:41
+17     38091057        .       C       T       .       PASS    AA=C;DP=131     GT:GQ:DP        0|1:100:36      0|0:56:20       0|0:100:73
+19     62836078        rs56191433      G       A       .       PASS    AA=A;DP=134     GT:GQ:DP        0|1:100:36      0|0:57:22       0|0:100:78
+12     111949032       rs16942470      G       A       .       PASS    AA=G;DP=144     GT:GQ:DP        0|1:100:36      0|0:57:27       0|0:100:82
+4      177613623       .       A       G       .       PASS    AA=A;DP=107     GT:GQ:DP        0|1:100:36      0|0:59:18       0|0:100:52
+6      31230105        rs2073717       G       C       .       PASS    AA=.;DP=152     GT:GQ:DP        0|1:100:36      0|0:59:20       0|0:100:52
+5      18736659        .       C       T       .       PASS    AA=C;DP=113     GT:GQ:DP        0|1:100:36      0|0:59:20       0|0:100:57
+14     82749364        .       G       A       .       PASS    AA=G;DP=124     GT:GQ:DP        0|1:100:36      0|0:59:24       0|0:100:65
+13     42668831        rs4942193       T       C       .       PASS    AA=t;DP=135     GT:GQ:DP        0|1:100:36      0|0:62:19       0|0:100:40
+2      50328441        rs7576851       T       C       .       PASS    AA=T;DP=128     GT:GQ:DP        0|1:100:36      0|0:62:19       0|0:100:73
+4      169777091       rs11731836      C       G       .       PASS    AA=C;DP=137     GT:GQ:DP        0|1:100:36      0|0:63:23       0|0:100:79
+3      73428884        .       G       A       .       PASS    AA=G;DP=146     GT:GQ:DP        0|1:100:36      0|0:64:27       0|0:100:87
+12     30980939        rs10771783      G       A       .       PASS    AA=g;DP=148     GT:GQ:DP        0|1:100:36      0|0:65:20       0|0:100:51
+3      172915055       rs17518961      G       T       .       PASS    AA=G;DP=129     GT:GQ:DP        0|1:100:36      0|0:65:20       0|0:100:73
+4      186096444       .       C       A       .       PASS    AA=C;DP=138     GT:GQ:DP        0|1:100:36      0|0:65:20       0|0:100:79
+10     109474554       rs2244628       T       C       .       PASS    AA=T;DP=138     GT:GQ:DP        0|1:100:36      0|0:65:20       0|0:100:81
+5      173034463       .       A       G       .       PASS    AA=a;DP=146     GT:GQ:DP        0|1:100:36      0|0:65:20       0|0:100:83
+12     26039548        .       T       A       .       PASS    AA=T;DP=107     GT:GQ:DP        0|1:100:36      0|0:65:21       0|0:100:45
+13     18778404        rs9512517       A       G       .       PASS    AA=G;DP=129     GT:GQ:DP        0|1:100:36      0|0:65:21       0|0:100:73
+10     119812478       .       G       A       .       PASS    AA=G;DP=133     GT:GQ:DP        0|1:100:36      0|0:65:22       0|0:100:80
+2      230083369       .       C       T       .       PASS    AA=C;DP=150     GT:GQ:DP        0|1:100:36      0|0:65:23       0|0:100:94
+6      12392025        rs9357336       G       A       .       PASS    AA=G;DP=159     GT:GQ:DP        0|1:100:36      0|0:65:30       0|0:100:53
+8      1474776 .       C       G       .       PASS    AA=C;DP=143     GT:GQ:DP        0|1:100:36      0|0:68:22       0|0:100:44
+18     68737070        rs1943660       A       C       .       PASS    AA=C;DP=146     GT:GQ:DP        0|1:100:36      0|0:68:22       0|0:100:49
+6      102136162       .       T       A       .       PASS    AA=T;DP=128     GT:GQ:DP        0|1:100:36      0|0:68:22       0|0:100:67
+10     4280662 rs12264861      C       T       .       PASS    AA=C;DP=143     GT:GQ:DP        0|1:100:36      0|0:68:22       0|0:100:86
+10     30793849        .       T       A       .       PASS    AA=T;DP=149     GT:GQ:DP        0|1:100:36      0|0:68:27       0|0:100:88
+1      21715720        .       G       A       .       PASS    AA=g;DP=176     GT:GQ:DP        0|1:100:36      0|0:69:28       0|0:100:41
+1      234428911       .       G       A       .       PASS    AA=G;DP=144     GT:GQ:DP        0|1:100:36      0|0:69:32       0|0:100:73
+20     56890309        .       T       C       .       PASS    AA=T;DP=162     GT:GQ:DP        0|1:100:36      0|0:69:33       0|0:100:47
+9      37657994        rs4463517       C       T       .       PASS    AA=C;DP=177     GT:GQ:DP        0|1:100:36      0|0:69:37       0|0:100:53
+9      18970850        rs10811073      C       T       .       PASS    AA=C;DP=130     GT:GQ:DP        0|1:100:36      0|0:71:22       0|0:96:32
+1      181681941       rs4047801       A       G       .       PASS    AA=G;DP=139;HM2;HM3     GT:GQ:DP        0|1:100:36      0|0:71:23       0|0:100:36
+8      4177120 .       G       A       .       PASS    AA=G;DP=123     GT:GQ:DP        0|1:100:36      0|0:71:23       0|0:100:67
+15     99765880        rs28684649      C       T       .       PASS    AA=c;DP=147     GT:GQ:DP        0|1:100:36      0|0:71:23       0|0:100:85
+2      84169997        rs10182606      A       T       .       PASS    AA=T;DP=122     GT:GQ:DP        0|1:100:36      0|0:71:24       0|0:100:63
+7      157995691       rs11980070      G       A       .       PASS    AA=g;DP=125     GT:GQ:DP        0|1:100:36      0|0:72:25       0|0:100:66
+7      111416037       rs9655814       C       T       .       PASS    AA=C;DP=139     GT:GQ:DP        0|1:100:36      0|0:72:28       0|0:100:35
+13     88136648        .       G       T       .       PASS    AA=G;DP=150     GT:GQ:DP        0|1:100:36      0|0:72:34       0|0:100:79
+1      177505653       .       C       T       .       PASS    AA=T;DP=141     GT:GQ:DP        0|1:100:36      0|0:74:23       0|0:100:81
+4      120918191       rs10011567      C       T       .       PASS    AA=T;DP=114     GT:GQ:DP        0|1:100:36      0|0:74:24       0|0:100:54
+10     130736148       .       A       G       .       PASS    AA=A;DP=123     GT:GQ:DP        0|1:100:36      0|0:74:24       0|0:100:64
+14     22188808        .       T       C       .       PASS    AA=T;DP=141     GT:GQ:DP        0|1:100:36      0|0:74:24       0|0:100:80
+4      37651415        rs2890591       T       C       .       PASS    AA=T;DP=136     GT:GQ:DP        0|1:100:36      0|0:74:26       0|0:100:74
+7      152756426       rs57296913      G       A       .       PASS    AA=G;DP=144     GT:GQ:DP        0|1:100:36      0|0:75:26       0|0:100:82
+8      1676584 rs11782618      A       C       .       PASS    AA=A;DP=126     GT:GQ:DP        0|1:100:36      0|0:77:24       0|0:100:67
+22     46245836        rs7286090       T       C       .       PASS    AA=T;DP=139     GT:GQ:DP        0|1:100:36      0|0:77:24       0|0:100:80
+22     23854337        .       C       T       .       PASS    AA=C;DP=145     GT:GQ:DP        0|1:100:36      0|0:77:24       0|0:100:89
+17     40668483        rs9903656       G       A       .       PASS    AA=A;DP=139     GT:GQ:DP        0|1:100:36      0|0:77:25       0|0:100:79
+16     56140712        rs4784827       C       T       .       PASS    AA=C;DP=142     GT:GQ:DP        0|1:100:36      0|0:77:25       0|0:100:82
+2      49252072        rs10865240      C       G       .       PASS    AA=G;DP=145     GT:GQ:DP        0|1:100:36      0|0:77:25       0|0:100:86
+8      56682638        rs6990132       C       T       .       PASS    AA=C;DP=140     GT:GQ:DP        0|1:100:36      0|0:77:27       0|0:84:29
+8      15128976        .       A       G       .       PASS    AA=A;DP=154     GT:GQ:DP        0|1:100:36      0|0:78:36       0|0:100:82
+1      47238460        rs56294988      C       T       .       PASS    AA=C;DP=146     GT:GQ:DP        0|1:100:36      0|0:80:25       0|0:100:48
+9      130243395       .       C       A       .       PASS    AA=A;DP=156     GT:GQ:DP        0|1:100:36      0|0:80:25       0|0:100:53
+2      9629704 .       G       A       .       PASS    AA=g;DP=124     GT:GQ:DP        0|1:100:36      0|0:80:25       0|0:100:63
+11     86153150        .       A       G       .       PASS    AA=A;DP=139     GT:GQ:DP        0|1:100:36      0|0:80:25       0|0:100:81
+2      37862996        rs6718541       A       G       .       PASS    AA=A;DP=147     GT:GQ:DP        0|1:100:36      0|0:80:25       0|0:100:87
+10     2960305 rs6601995       G       C       .       PASS    AA=G;DP=147     GT:GQ:DP        0|1:100:36      0|0:80:25       0|0:100:92
+18     41713145        rs34545102      A       G       .       PASS    AA=A;DP=147     GT:GQ:DP        0|1:100:36      0|0:80:26       0|0:100:86
+17     53065891        .       G       A       .       PASS    AA=G;DP=129     GT:GQ:DP        0|1:100:36      0|0:83:26       0|0:100:60
+11     125855545       .       G       A       .       PASS    AA=G;DP=125     GT:GQ:DP        0|1:100:36      0|0:83:26       0|0:100:65
+5      43840733        rs4493678       A       G       .       PASS    AA=a;DP=144     GT:GQ:DP        0|1:100:36      0|0:83:26       0|0:100:81
+10     71859936        rs4553291       G       C       .       PASS    AA=G;DP=143     GT:GQ:DP        0|1:100:36      0|0:83:26       0|0:100:83
+2      13597804        rs13386046      A       T       .       PASS    AA=A;DP=144     GT:GQ:DP        0|1:100:36      0|0:83:27       0|0:100:40
+7      105452913       rs56235770      C       T       .       PASS    AA=T;DP=147     GT:GQ:DP        0|1:100:36      0|0:83:28       0|0:100:86
+3      7494516 .       C       T       .       PASS    AA=C;DP=157     GT:GQ:DP        0|1:100:36      0|0:86:27       0|0:100:48
+11     6542246 rs16915423      C       T       .       PASS    AA=C;DP=148     GT:GQ:DP        0|1:100:36      0|0:86:27       0|0:100:85
+12     103907071       rs55916348      T       C       .       PASS    AA=T;DP=155     GT:GQ:DP        0|1:100:36      0|0:86:28       0|0:100:44
+2      16487928        rs7606503       G       A       .       PASS    AA=A;DP=138     GT:GQ:DP        0|1:100:36      0|0:86:29       0|0:100:75
+17     46294057        rs8081903       G       A       .       PASS    AA=G;DP=149     GT:GQ:DP        0|1:100:36      0|0:86:30       0|0:100:37
+12     67372240        .       G       A       .       PASS    AA=G;DP=158     GT:GQ:DP        0|1:100:36      0|0:89:28       0|0:100:55
+8      26103445        .       C       A       .       PASS    AA=C;DP=129     GT:GQ:DP        0|1:100:36      0|0:89:28       0|0:100:66
+1      117986243       rs319509        T       C       .       PASS    AA=C;DP=161     GT:GQ:DP        0|1:100:36      0|0:89:29       0|0:100:51
+12     77816343        .       G       C       .       PASS    AA=G;DP=120     GT:GQ:DP        0|1:100:36      0|0:92:29       0|0:100:54
+6      132905487       rs9493368       T       G       .       PASS    AA=T;DP=135     GT:GQ:DP        0|1:100:36      0|0:92:29       0|0:100:70
+4      69802782        .       G       A       .       PASS    AA=g;DP=145     GT:GQ:DP        0|1:100:36      0|0:92:29       0|0:100:80
+6      32500923        rs3135351       C       A       .       PASS    AA=C;DP=167     GT:GQ:DP        0|1:100:36      0|0:92:30       0|0:100:58
+2      212827612       rs7572366       C       T       .       PASS    AA=T;DP=143     GT:GQ:DP        0|1:100:36      0|0:92:30       0|0:100:77
+2      55576271        .       T       G       .       PASS    AA=T;DP=153     GT:GQ:DP        0|1:100:36      0|0:92:30       0|0:71:33
+6      16206088        .       G       A       .       PASS    AA=G;DP=146     GT:GQ:DP        0|1:100:36      0|0:95:30       0|0:100:79
+4      37327550        rs2292298       A       G       .       PASS    AA=a;DP=164     GT:GQ:DP        0|1:100:36      0|0:95:31       0|0:100:54
+11     81656280        rs17143367      C       T       .       PASS    AA=C;DP=127     GT:GQ:DP        0|1:100:36      0|0:95:31       0|0:100:61
+3      24444797        rs4557108       C       T       .       PASS    AA=C;DP=136     GT:GQ:DP        0|1:100:36      0|0:95:32       0|0:100:69
+1      1151225 .       A       G       .       PASS    AA=G;DP=145     GT:GQ:DP        0|1:100:36      0|0:98:31       0|0:100:77
+15     56581667        .       T       C       .       PASS    AA=T;DP=149     GT:GQ:DP        0|1:100:36      0|0:98:32       0|0:100:81
+6      150104648       rs10872644      T       C       .       PASS    AA=T;DP=142     GT:GQ:DP        0|1:100:36      0|1:100:14      0|0:100:92
+7      106209800       rs2029876       G       A       .       PASS    AA=A;DP=135     GT:GQ:DP        0|1:100:36      0|1:100:21      0|0:100:78
+6      16783712        rs9464933       A       G       .       PASS    AA=A;DP=142     GT:GQ:DP        0|1:100:36      0|1:100:21      0|0:100:84
+8      108024577       rs58384262      C       T       .       PASS    AA=C;DP=141     GT:GQ:DP        0|1:100:36      0|1:100:22      0|0:100:43
+14     50555532        rs12896768      T       C       .       PASS    AA=C;DP=129     GT:GQ:DP        0|1:100:36      0|1:100:22      0|0:100:67
+18     55393325        rs2851854       A       G       .       PASS    AA=G;DP=140     GT:GQ:DP        0|1:100:36      0|1:100:22      0|0:100:80
+12     45142362        rs6582658       G       A       .       PASS    AA=G;DP=126     GT:GQ:DP        0|1:100:36      0|1:100:23      0|0:100:68
+5      37926467        .       C       T       .       PASS    AA=C;DP=144     GT:GQ:DP        0|1:100:36      0|1:100:24      0|0:100:86
+1      166725888       rs11484809      C       T       .       PASS    AA=C;DP=160;HM2 GT:GQ:DP        0|1:100:36      0|1:100:25      0|0:100:50
+5      111934006       .       T       G       .       PASS    AA=T;DP=134     GT:GQ:DP        0|1:100:36      0|1:100:25      0|0:100:74
+4      47228358        rs9999398       G       A       .       PASS    AA=g;DP=139     GT:GQ:DP        0|1:100:36      0|1:100:26      0|0:100:78
+6      76351685        rs504323        G       A       .       PASS    AA=G;DP=142     GT:GQ:DP        0|1:100:36      0|1:100:27      0|0:100:79
+5      119442080       .       C       T       .       PASS    AA=C;DP=109     GT:GQ:DP        0|1:100:36      0|1:100:27      0|0:99:34
+9      76683294        rs10869454      T       A       .       PASS    AA=t;DP=152     GT:GQ:DP        0|1:100:36      0|1:100:29      0|0:100:87
+6      17899020        rs1359229       T       C       .       PASS    AA=C;DP=155     GT:GQ:DP        0|1:100:36      0|1:100:30      0|0:100:90
+11     127764630       .       C       G       .       PASS    AA=C;DP=158     GT:GQ:DP        0|1:100:36      0|1:100:30      0|0:100:95
+14     58933645        rs1253139       C       G       .       PASS    AA=G;DP=135     GT:GQ:DP        0|1:100:36      0|1:100:31      0|0:100:46
+22     45035469        rs6519994       G       A       .       PASS    AA=g;DP=129     GT:GQ:DP        0|1:100:36      0|1:100:32      0|0:100:61
+12     129378610       .       G       T       .       PASS    AA=G;DP=160     GT:GQ:DP        0|1:100:36      0|1:100:33      0|0:100:47
+18     43879638        .       G       A       .       PASS    AA=G;DP=165     GT:GQ:DP        0|1:100:36      0|1:100:33      0|0:100:50
+2      170641763       rs961313        T       A       .       PASS    AA=A;DP=178     GT:GQ:DP        0|1:100:36      0|1:100:35      0|0:100:61
+3      103694940       rs9872024       C       T       .       PASS    AA=C;DP=147     GT:GQ:DP        0|1:100:36      0|1:100:36      0|0:100:75
+11     106382809       .       A       G       .       PASS    AA=A;DP=180     GT:GQ:DP        0|1:100:36      0|1:100:41      0|0:100:58
+13     102056601       rs756040        T       C       .       PASS    AA=C;DP=126     GT:GQ:DP        0|1:100:36      0|1:23:22       0|0:100:73
+2      239084468       rs6752403       G       A       .       PASS    AA=g;DP=129     GT:GQ:DP        0|1:100:36      0|1:25:17       0|0:100:77
+1      92395667        rs2209337       C       G       .       PASS    AA=G;DP=133     GT:GQ:DP        0|1:100:36      0|1:32:16       0|0:100:85
+20     22001109        rs59282496      A       G       .       PASS    AA=A;DP=132     GT:GQ:DP        0|1:100:36      0|1:44:15       0|0:100:77
+18     58800111        rs580750        C       A       .       PASS    AA=A;DP=109     GT:GQ:DP        0|1:100:36      0|1:59:14       0|0:100:58
+12     3028591 rs12312740      G       A       .       PASS    AA=g;DP=113     GT:GQ:DP        0|1:100:36      0|1:68:14       0|0:100:62
+20     51780550        .       C       T       .       PASS    AA=C;DP=134     GT:GQ:DP        0|1:100:36      0|1:69:23       0|0:100:79
+15     90456266        rs207959        T       C       .       PASS    AA=t;DP=167     GT:GQ:DP        0|1:100:36      0|1:71:19       0|0:100:68
+9      89110932        rs56310708      C       T       .       PASS    AA=T;DP=104     GT:GQ:DP        0|1:100:36      0|1:73:27       0|0:90:31
+2      185293051       .       A       C       .       PASS    AA=A;DP=140     GT:GQ:DP        0|1:100:36      0|1:81:23       0|0:100:85
+6      32802430        rs9275999       C       T       .       PASS    AA=t;DP=135     GT:GQ:DP        0|1:100:36      0|1:86:17       0|0:100:84
+4      125017535       .       C       T       .       PASS    AA=C;DP=142     GT:GQ:DP        0|1:100:36      0|1:87:30       0|0:100:79
+17     1643536 rs12602913      G       C       .       PASS    AA=G;DP=122     GT:GQ:DP        0|1:100:36      0|1:89:19       0|0:100:66
+15     72563835        rs4886598       T       A       .       PASS    AA=T;DP=105     GT:GQ:DP        0|1:100:36      0|1:91:20       0|0:48:45
+5      7166974 rs16878364      G       A       .       PASS    AA=G;DP=136     GT:GQ:DP        0|1:100:36      0|1:94:23       0|0:80:35
+5      113669310       .       G       A       .       PASS    AA=G;DP=145     GT:GQ:DP        0|1:100:36      0|1:95:23       0|0:100:85
+8      90185590        rs1240093       G       A       .       PASS    AA=G;DP=130     GT:GQ:DP        0|1:100:36      1|1:14:17       0|1:100:78
+4      172753095       rs60391549      C       A       .       PASS    AA=C;DP=146     GT:GQ:DP        0|1:100:36      1|1:17:24       0|1:100:87
+9      136520772       rs62571282      G       A       .       PASS    AA=G;DP=134     GT:GQ:DP        0|1:100:36      1|1:21:19       0|1:100:81
+6      149844875       rs2789504       A       G       .       PASS    AA=G;DP=81      GT:GQ:DP        0|1:100:36      1|1:27:10       0|1:100:32
+11     132145566       rs1105289       G       A       .       PASS    AA=A;DP=118     GT:GQ:DP        0|1:100:36      1|1:30:18       0|1:100:63
+19     8913236 rs7507380       A       G       .       PASS    AA=G;DP=114     GT:GQ:DP        0|1:100:36      1|1:31:16       0|1:100:64
+12     120696191       rs55695154      A       C       .       PASS    AA=C;DP=116     GT:GQ:DP        0|1:100:36      1|1:36:14       0|1:100:69
+2      17513288        rs1715128       G       A       .       PASS    AA=A;DP=107     GT:GQ:DP        0|1:100:36      1|1:38:19       0|1:100:53
+19     20264541        rs10410777      G       T       .       PASS    AA=-;DP=117     GT:GQ:DP        0|1:100:36      1|1:44:23       0|1:100:60
+11     114995488       rs11215636      A       G       .       PASS    AA=A;DP=104     GT:GQ:DP        0|1:100:36      1|1:45:20       0|1:100:46
+17     42409148        rs3851788       A       G       .       PASS    AA=G;DP=112     GT:GQ:DP        0|1:100:36      1|1:48:17       0|1:100:60
+3      158060740       rs9861359       C       G       .       PASS    AA=C;DP=129     GT:GQ:DP        0|1:100:36      1|1:48:19       0|1:100:74
+14     97968664        rs1350584       T       A       .       PASS    AA=A;DP=133     GT:GQ:DP        0|1:100:36      1|1:49:23       0|1:100:73
+2      218490299       rs890051        C       T       .       PASS    AA=C;DP=146     GT:GQ:DP        0|1:100:36      1|1:50:29       0|1:100:83
+3      57837780        rs1381012       G       A       .       PASS    AA=A;DP=122     GT:GQ:DP        0|1:100:36      1|1:51:18       0|1:100:68
+15     65033640        rs7181316       G       A       .       PASS    AA=G;DP=124     GT:GQ:DP        0|1:100:36      1|1:51:18       0|1:100:70
+17     36335239        rs8037  A       G       .       PASS    AA=G;DP=137     GT:GQ:DP        0|1:100:36      1|1:54:19       0|1:100:81
+2      219399634       rs1000936       A       G       .       PASS    AA=a;DP=126     GT:GQ:DP        0|1:100:36      1|1:54:22       0|1:100:70
+2      30411944        rs11127271      G       A       .       PASS    AA=G;DP=136     GT:GQ:DP        0|1:100:36      1|1:57:20       0|1:100:75
+15     92699450        rs3809554       T       G       .       PASS    AA=G;DP=134     GT:GQ:DP        0|1:100:36      1|1:59:26       0|1:100:72
+5      95909850        rs263375        C       A       .       PASS    AA=C;DP=125     GT:GQ:DP        0|1:100:36      1|1:60:21       0|1:100:70
+11     12534758        rs6485827       C       T       .       PASS    AA=C;DP=138     GT:GQ:DP        0|1:100:36      1|1:60:23       0|1:100:78
+12     4172639 rs10774205      A       T       .       PASS    AA=A;DP=129     GT:GQ:DP        0|1:100:36      1|1:63:22       0|1:100:73
+16     11593428        rs8054395       C       T       .       PASS    AA=C;DP=138     GT:GQ:DP        0|1:100:36      1|1:63:23       0|1:100:80
+5      1694815 rs6888166       C       T       .       PASS    AA=T;DP=152     GT:GQ:DP        0|1:100:36      1|1:63:25       0|1:100:50
+4      163680642       rs2100763       T       C       .       PASS    AA=T;DP=158     GT:GQ:DP        0|1:100:36      1|1:63:28       0|1:100:54
+6      23911122        rs6904242       C       T       .       PASS    AA=T;DP=117     GT:GQ:DP        0|1:100:36      1|1:66:23       0|1:100:56
+18     37533635        rs16975197      C       T       .       PASS    AA=T;DP=123     GT:GQ:DP        0|1:100:36      1|1:66:23       0|1:100:63
+2      206731840       rs4147709       C       A       .       PASS    AA=A;DP=143     GT:GQ:DP        0|1:100:36      1|1:69:24       0|1:100:83
+3      193176607       rs2669960       C       A       .       PASS    AA=c;DP=149     GT:GQ:DP        0|1:100:36      1|1:69:24       0|1:100:88
+4      88207564        rs2280952       T       C       .       PASS    AA=C;DP=137     GT:GQ:DP        0|1:100:36      1|1:69:26       0|1:100:77
+6      151088066       rs7740199       T       C       .       PASS    AA=C;DP=141     GT:GQ:DP        0|1:100:36      1|1:69:26       0|1:100:78
+1      236173871       rs2130550       C       T       .       PASS    AA=C;DP=136     GT:GQ:DP        0|1:100:36      1|1:72:25       0|1:100:76
+1      202463105       rs4614318       C       T       .       PASS    AA=C;DP=164;HM2;HM3     GT:GQ:DP        0|1:100:36      1|1:73:37       0|1:100:44
+15     61826103        rs8034675       T       C       .       PASS    AA=T;DP=133     GT:GQ:DP        0|1:100:36      1|1:75:26       0|1:100:72
+17     29909071        rs12943903      G       T       .       PASS    AA=G;DP=150     GT:GQ:DP        0|1:100:36      1|1:93:33       0|1:100:81
+12     104316049       rs12370020      T       A       .       PASS    AA=T;DP=148     GT:GQ:DP        0|1:100:37      0|0:100:32      0|0:100:81
+11     108351292       rs7943414       A       G       .       PASS    AA=A;DP=158     GT:GQ:DP        0|1:100:37      0|0:100:33      0|0:100:45
+10     24318754        rs10828584      T       C       .       PASS    AA=T;DP=159     GT:GQ:DP        0|1:100:37      0|0:100:33      0|0:100:50
+11     44980325        rs11038256      T       A       .       PASS    AA=T;DP=176     GT:GQ:DP        0|1:100:37      0|0:100:35      0|0:100:105
+1      91821497        rs17131494      G       A       .       PASS    AA=G;DP=168;HM2;HM3     GT:GQ:DP        0|1:100:37      0|0:100:36      0|0:100:81
+1      240070287       .       C       T       .       PASS    AA=T;DP=159     GT:GQ:DP        0|1:100:37      0|0:100:37      0|0:100:86
+8      14265526        rs7831683       C       G       .       PASS    AA=C;DP=142     GT:GQ:DP        0|1:100:37      0|0:100:42      0|0:100:63
+3      40029585        rs9825940       A       C       .       PASS    AA=C;DP=159     GT:GQ:DP        0|1:100:37      0|0:30:24       0|0:100:97
+1      189580097       rs12072606      T       C       .       PASS    AA=T;DP=127     GT:GQ:DP        0|1:100:37      0|0:35:10       0|0:100:82
+1      6447472 .       A       G       .       PASS    AA=A;DP=151     GT:GQ:DP        0|1:100:37      0|0:37:17       0|0:100:47
+11     119486995       rs10736502      G       C       .       PASS    AA=C;DP=135     GT:GQ:DP        0|1:100:37      0|0:38:18       0|0:100:80
+11     118845462       rs6589753       G       T       .       PASS    AA=G;DP=114     GT:GQ:DP        0|1:100:37      0|0:38:19       0|0:100:58
+2      233614500       .       G       A       .       PASS    AA=g;DP=115     GT:GQ:DP        0|1:100:37      0|0:41:12       0|0:100:67
+8      140103545       .       G       A       .       PASS    AA=G;DP=123     GT:GQ:DP        0|1:100:37      0|0:41:12       0|0:100:71
+12     115355807       rs2091676       G       T       .       PASS    AA=T;DP=170     GT:GQ:DP        0|1:100:37      0|0:43:24       0|0:100:65
+16     80224724        .       A       G       .       PASS    AA=A;DP=127     GT:GQ:DP        0|1:100:37      0|0:44:13       0|0:100:78
+12     50222675        .       G       A       .       PASS    AA=G;DP=114     GT:GQ:DP        0|1:100:37      0|0:47:14       0|0:100:64
+2      16071402        .       T       C       .       PASS    AA=T;DP=121     GT:GQ:DP        0|1:100:37      0|0:47:14       0|0:100:69
+17     69358337        .       A       G       .       PASS    AA=A;DP=128     GT:GQ:DP        0|1:100:37      0|0:47:14       0|0:100:76
+10     78603528        rs17482756      T       G       .       PASS    AA=T;DP=114     GT:GQ:DP        0|1:100:37      0|0:50:15       0|0:100:62
+6      32759878        rs6457614       T       G       .       PASS    AA=t;DP=122     GT:GQ:DP        0|1:100:37      0|0:50:16       0|0:100:68
+20     13004603        rs243890        A       C       .       PASS    AA=A;DP=124     GT:GQ:DP        0|1:100:37      0|0:52:27       0|0:100:59
+17     51527839        rs1155520       T       G       .       PASS    AA=T;DP=155     GT:GQ:DP        0|1:100:37      0|0:53:16       0|0:100:102
+19     48855621        rs397374        A       T       .       PASS    AA=A;DP=138     GT:GQ:DP        0|1:100:37      0|0:53:16       0|0:100:43
+16     80675563        rs9788807       C       A       .       PASS    AA=C;DP=116     GT:GQ:DP        0|1:100:37      0|0:53:16       0|0:100:64
+20     25535533        rs6083899       C       T       .       PASS    AA=C;DP=136     GT:GQ:DP        0|1:100:37      0|0:53:17       0|0:100:42
+2      7181601 rs10929460      C       G       .       PASS    AA=G;DP=123     GT:GQ:DP        0|1:100:37      0|0:53:17       0|0:100:70
+2      215997084       .       A       C       .       PASS    AA=A;DP=142     GT:GQ:DP        0|1:100:37      0|0:54:23       0|0:100:79
+16     55243102        .       G       A       .       PASS    AA=-;DP=154     GT:GQ:DP        0|1:100:37      0|0:56:17       0|0:100:102
+2      177726406       .       T       C       .       PASS    AA=T;DP=103     GT:GQ:DP        0|1:100:37      0|0:56:17       0|0:100:52
+16     77007269        rs60231039      G       T       .       PASS    AA=G;DP=128     GT:GQ:DP        0|1:100:37      0|0:56:17       0|0:100:75
+2      159566053       rs16843538      C       T       .       PASS    AA=C;DP=134     GT:GQ:DP        0|1:100:37      0|0:56:17       0|0:100:75
+5      43748739        rs10064711      C       T       .       PASS    AA=T;DP=131     GT:GQ:DP        0|1:100:37      0|0:56:17       0|0:100:77
+1      118131155       rs10923419      C       G       .       PASS    AA=C;DP=140;HM2 GT:GQ:DP        0|1:100:37      0|0:56:19       0|0:100:74
+5      178481860       rs10447301      G       C       .       PASS    AA=A;DP=148     GT:GQ:DP        0|1:100:37      0|0:56:19       0|0:92:38
+7      150124123       rs59997037      G       A       .       PASS    AA=G;DP=142     GT:GQ:DP        0|1:100:37      0|0:59:18       0|0:100:86
+2      219837139       rs12477209      C       T       .       PASS    AA=T;DP=135     GT:GQ:DP        0|1:100:37      0|0:62:19       0|0:100:39
+16     79224327        rs56713233      T       C       .       PASS    AA=T;DP=145     GT:GQ:DP        0|1:100:37      0|0:62:19       0|0:100:47
+17     76823592        .       C       T       .       PASS    AA=t;DP=164     GT:GQ:DP        0|1:100:37      0|0:62:19       0|0:100:50
+8      103012000       rs11986127      A       G       .       PASS    AA=G;DP=116     GT:GQ:DP        0|1:100:37      0|0:62:19       0|0:100:61
+20     61178443        rs6011593       A       G       .       PASS    AA=A;DP=138     GT:GQ:DP        0|1:100:37      0|0:62:20       0|0:100:84
+X      1146925 .       A       G       .       PASS    AA=.;DP=112     GT:GQ:DP        0|1:100:37      0|0:65:20       0|0:100:43
+12     118446415       .       G       A       .       PASS    AA=G;DP=150     GT:GQ:DP        0|1:100:37      0|0:65:20       0|0:100:53
+12     116724056       rs11068678      G       A       .       PASS    AA=G;DP=114     GT:GQ:DP        0|1:100:37      0|0:65:20       0|0:100:58
+14     38316296        .       C       A       .       PASS    AA=C;DP=144     GT:GQ:DP        0|1:100:37      0|0:65:20       0|0:100:89
+18     73256838        .       T       C       .       PASS    AA=T;DP=119     GT:GQ:DP        0|1:100:37      0|0:65:21       0|0:100:60
+10     29914508        rs2368369       A       C       .       PASS    AA=A;DP=150     GT:GQ:DP        0|1:100:37      0|0:68:21       0|0:100:52
+13     97114185        .       C       T       .       PASS    AA=C;DP=165     GT:GQ:DP        0|1:100:37      0|0:68:24       0|0:100:57
+1      230828657       .       T       C       .       PASS    AA=T;DP=151     GT:GQ:DP        0|1:100:37      0|0:68:32       0|0:100:82
+12     30458352        .       A       G       .       PASS    AA=A;DP=151     GT:GQ:DP        0|1:100:37      0|0:71:22       0|0:100:52
+20     59350556        .       T       G       .       PASS    AA=T;DP=120     GT:GQ:DP        0|1:100:37      0|0:71:22       0|0:100:61
+8      125681041       .       G       A       .       PASS    AA=G;DP=123     GT:GQ:DP        0|1:100:37      0|0:71:22       0|0:100:62
+15     91461313        .       T       C       .       PASS    AA=T;DP=142     GT:GQ:DP        0|1:100:37      0|0:71:22       0|0:100:83
+3      16116468        rs4504158       G       T       .       PASS    AA=G;DP=146     GT:GQ:DP        0|1:100:37      0|0:71:22       0|0:100:91
+2      219467323       rs4674347       C       G       .       PASS    AA=C;DP=154     GT:GQ:DP        0|1:100:37      0|0:71:22       0|0:100:99
+8      106068733       rs7845707       A       G       .       PASS    AA=A;DP=118     GT:GQ:DP        0|1:100:37      0|0:71:23       0|0:100:57
+8      55687394        rs10112903      G       A       .       PASS    AA=G;DP=132     GT:GQ:DP        0|1:100:37      0|0:71:23       0|0:100:73
+1      88097221        .       T       C       .       PASS    AA=T;DP=145     GT:GQ:DP        0|1:100:37      0|0:71:23       0|0:100:87
+6      148011801       rs702358        C       T       .       PASS    AA=C;DP=142     GT:GQ:DP        0|1:100:37      0|0:71:24       0|0:100:70
+8      6798259 rs28508526      T       C       .       PASS    AA=.;DP=159     GT:GQ:DP        0|1:100:37      0|0:71:33       0|0:100:51
+2      17309256        rs6740320       T       C       .       PASS    AA=C;DP=142     GT:GQ:DP        0|1:100:37      0|0:74:23       0|0:100:65
+13     38600112        .       A       G       .       PASS    AA=A;DP=133     GT:GQ:DP        0|1:100:37      0|0:74:23       0|0:100:75
+11     11518582        rs4910382       A       G       .       PASS    AA=A;DP=136     GT:GQ:DP        0|1:100:37      0|0:74:23       0|0:100:77
+8      118086024       rs2047963       T       C       .       PASS    AA=C;DP=138     GT:GQ:DP        0|1:100:37      0|0:74:23       0|0:100:79
+11     31864087        rs694777        A       G       .       PASS    AA=A;DP=140     GT:GQ:DP        0|1:100:37      0|0:74:23       0|0:100:81
+3      6295215 rs4054459       A       G       .       PASS    AA=A;DP=142     GT:GQ:DP        0|1:100:37      0|0:74:23       0|0:100:82
+13     79502586        rs9574541       T       A       .       PASS    AA=T;DP=143     GT:GQ:DP        0|1:100:37      0|0:74:23       0|0:100:87
+3      47890122        rs319682        A       G       .       PASS    AA=G;DP=144     GT:GQ:DP        0|1:100:37      0|0:74:23       0|0:98:39
+10     115623254       .       T       C       .       PASS    AA=T;DP=148     GT:GQ:DP        0|1:100:37      0|0:74:25       0|0:100:45
+1      3223347 .       C       T       .       PASS    AA=N;DP=178     GT:GQ:DP        0|1:100:37      0|0:74:27       0|0:100:56
+1      40839855        rs9438943       A       G       .       PASS    AA=a;DP=151     GT:GQ:DP        0|1:100:37      0|0:77:25       0|0:100:47
+9      79689144        .       C       T       .       PASS    AA=T;DP=138     GT:GQ:DP        0|1:100:37      0|0:77:27       0|0:100:74
+5      149622887       .       G       T       .       PASS    AA=T;DP=140     GT:GQ:DP        0|1:100:37      0|0:80:25       0|0:100:36
+2      192018038       rs59486172      T       C       .       PASS    AA=T;DP=150     GT:GQ:DP        0|1:100:37      0|0:80:25       0|0:100:45
+10     80560680        rs4979845       T       C       .       PASS    AA=T;DP=117     GT:GQ:DP        0|1:100:37      0|0:80:25       0|0:100:55
+15     27271102        rs11071263      C       T       .       PASS    AA=T;DP=120     GT:GQ:DP        0|1:100:37      0|0:80:25       0|0:100:55
+16     75801562        .       C       A       .       PASS    AA=C;DP=140     GT:GQ:DP        0|1:100:37      0|0:80:25       0|0:100:77
+6      138396251       .       G       A       .       PASS    AA=G;DP=142     GT:GQ:DP        0|1:100:37      0|0:80:25       0|0:100:80
+10     57751850        rs7918023       G       A       .       PASS    AA=G;DP=112     GT:GQ:DP        0|1:100:37      0|0:80:26       0|0:100:42
+12     27959890        .       A       G       .       PASS    AA=A;DP=176     GT:GQ:DP        0|1:100:37      0|0:80:26       0|0:100:49
+16     27299392        rs8062714       G       A       .       PASS    AA=G;DP=179     GT:GQ:DP        0|1:100:37      0|0:80:28       0|0:100:61
+1      28221740        rs12144354      T       C       .       PASS    AA=T;DP=151;HM2;HM3     GT:GQ:DP        0|1:100:37      0|0:83:26       0|0:100:48
+8      29912369        .       G       A       .       PASS    AA=G;DP=167     GT:GQ:DP        0|1:100:37      0|0:83:26       0|0:100:50
+10     12420205        .       C       A       .       PASS    AA=C;DP=142     GT:GQ:DP        0|1:100:37      0|0:83:26       0|0:100:80
+1      222518362       .       A       T       .       PASS    AA=A;DP=144     GT:GQ:DP        0|1:100:37      0|0:83:26       0|0:100:81
+8      8387122 rs10217017      G       A       .       PASS    AA=G;DP=161     GT:GQ:DP        0|1:100:37      0|0:83:27       0|0:100:56
+9      120490509       rs2416680       C       T       .       PASS    AA=T;DP=129     GT:GQ:DP        0|1:100:37      0|0:83:27       0|0:100:65
+14     85043600        rs10151388      T       C       .       PASS    AA=C;DP=137     GT:GQ:DP        0|1:100:37      0|0:83:27       0|0:100:73
+8      81764260        .       G       A       .       PASS    AA=A;DP=137     GT:GQ:DP        0|1:100:37      0|0:83:27       0|0:100:76
+2      79804327        .       C       G       .       PASS    AA=C;DP=145     GT:GQ:DP        0|1:100:37      0|0:83:27       0|0:100:82
+13     105045125       rs10508158      C       T       .       PASS    AA=T;DP=167     GT:GQ:DP        0|1:100:37      0|0:83:27       0|0:100:85
+4      18145914        .       C       G       .       PASS    AA=G;DP=154     GT:GQ:DP        0|1:100:37      0|0:83:27       0|0:100:91
+12     114397600       rs12309531      C       G       .       PASS    AA=C;DP=126     GT:GQ:DP        0|1:100:37      0|0:83:28       0|0:100:64
+2      47688450        rs17036720      C       G       .       PASS    AA=C;DP=140     GT:GQ:DP        0|1:100:37      0|0:83:28       0|0:100:75
+1      199387353       rs2068152       C       A       .       PASS    AA=C;DP=153     GT:GQ:DP        0|1:100:37      0|0:86:27       0|0:100:90
+21     36819343        .       G       A       .       PASS    AA=g;DP=151     GT:GQ:DP        0|1:100:37      0|0:86:27       0|0:100:90
+7      25313576        rs7799869       G       C       .       PASS    AA=G;DP=145     GT:GQ:DP        0|1:100:37      0|0:86:28       0|0:100:80
+9      16107883        .       G       A       .       PASS    AA=G;DP=152     GT:GQ:DP        0|1:100:37      0|0:86:28       0|0:100:83
+1      216747668       .       T       A       .       PASS    AA=T;DP=168     GT:GQ:DP        0|1:100:37      0|0:86:29       0|0:100:104
+3      124108339       .       T       C       .       PASS    AA=T;DP=144     GT:GQ:DP        0|1:100:37      0|0:86:29       0|0:100:82
+1      215627959       .       G       A       .       PASS    AA=G;DP=129     GT:GQ:DP        0|1:100:37      0|0:89:28       0|0:100:64
+20     23579067        rs60143382      G       A       .       PASS    AA=A;DP=128     GT:GQ:DP        0|1:100:37      0|0:89:28       0|0:100:66
+18     68590576        .       A       G       .       PASS    AA=a;DP=142     GT:GQ:DP        0|1:100:37      0|0:89:28       0|0:100:79
+3      168326329       rs9637459       T       C       .       PASS    AA=t;DP=151     GT:GQ:DP        0|1:100:37      0|0:89:28       0|0:100:89
+21     42840539        .       C       T       .       PASS    AA=C;DP=158     GT:GQ:DP        0|1:100:37      0|0:89:28       0|0:100:92
+1      117916766       rs1963278       G       A       .       PASS    AA=G;DP=155;HM2;HM3     GT:GQ:DP        0|1:100:37      0|0:89:29       0|0:100:91
+1      107244265       .       G       A       .       PASS    AA=G;DP=147     GT:GQ:DP        0|1:100:37      0|0:89:30       0|0:100:80
+1      108205865       .       C       T       .       PASS    AA=C;DP=143     GT:GQ:DP        0|1:100:37      0|0:90:35       0|0:100:65
+7      117444296       rs13227352      T       C       .       PASS    AA=T;DP=129     GT:GQ:DP        0|1:100:37      0|0:92:29       0|0:100:61
+1      209056342       .       G       A       .       PASS    AA=G;DP=129     GT:GQ:DP        0|1:100:37      0|0:92:29       0|0:100:65
+12     5891509 .       G       A       .       PASS    AA=G;DP=152     GT:GQ:DP        0|1:100:37      0|0:92:29       0|0:100:87
+2      7366409 rs16866095      A       G       .       PASS    AA=N;DP=137     GT:GQ:DP        0|1:100:37      0|0:92:30       0|0:100:69
+7      21232714        .       G       A       .       PASS    AA=A;DP=166     GT:GQ:DP        0|1:100:37      0|0:92:31       0|0:100:98
+6      107358270       .       G       A       .       PASS    AA=G;DP=140     GT:GQ:DP        0|1:100:37      0|0:94:36       0|0:100:71
+15     90403318        rs8032656       G       C       .       PASS    AA=G;DP=173     GT:GQ:DP        0|1:100:37      0|0:95:31       0|0:100:59
+17     11491427        .       A       G       .       PASS    AA=a;DP=126     GT:GQ:DP        0|1:100:37      0|0:95:31       0|0:100:59
+7      50302742        rs10239000      A       G       .       PASS    AA=G;DP=131     GT:GQ:DP        0|1:100:37      0|0:95:31       0|0:100:63
+4      77246513        .       G       A       .       PASS    AA=G;DP=150     GT:GQ:DP        0|1:100:37      0|0:95:31       0|0:100:83
+12     876630  rs12307778      A       G       .       PASS    AA=A;DP=154     GT:GQ:DP        0|1:100:37      0|0:95:31       0|0:100:86
+9      34806459        .       C       T       .       PASS    AA=C;DP=145     GT:GQ:DP        0|1:100:37      0|0:98:31       0|0:100:79
+17     11337208        rs16944868      A       C       .       PASS    AA=A;DP=144     GT:GQ:DP        0|1:100:37      0|0:98:31       0|0:96:32
+14     55495013        .       G       C       .       PASS    AA=G;DP=131     GT:GQ:DP        0|1:100:37      0|0:98:32       0|0:100:61
+14     32010835        .       T       C       .       PASS    AA=T;DP=139     GT:GQ:DP        0|1:100:37      0|0:98:32       0|0:100:70
+2      204283366       .       T       C       .       PASS    AA=T;DP=146     GT:GQ:DP        0|1:100:37      0|0:98:32       0|0:100:77
+19     61609247        .       T       C       .       PASS    AA=C;DP=159     GT:GQ:DP        0|1:100:37      0|0:98:32       0|0:100:91
+2      21861804        rs1376631       A       G       .       PASS    AA=A;DP=125     GT:GQ:DP        0|1:100:37      0|1:100:17      0|0:100:71
+7      113569313       .       G       A       .       PASS    AA=g;DP=118     GT:GQ:DP        0|1:100:37      0|1:100:18      0|0:100:65
+4      106742768       .       G       A       .       PASS    AA=G;DP=145     GT:GQ:DP        0|1:100:37      0|1:100:20      0|0:100:89
+20     29646930        rs6060171       C       T       .       PASS    AA=C;DP=148     GT:GQ:DP        0|1:100:37      0|1:100:21      0|0:100:92
+2      231258428       rs13011835      C       G       .       PASS    AA=G;DP=151     GT:GQ:DP        0|1:100:37      0|1:100:22      0|0:100:56
+5      115288352       .       A       G       .       PASS    AA=A;DP=125     GT:GQ:DP        0|1:100:37      0|1:100:22      0|0:100:67
+2      224998935       rs764405        C       T       .       PASS    AA=C;DP=150     GT:GQ:DP        0|1:100:37      0|1:100:22      0|0:100:93
+7      144047082       rs6971371       A       T       .       PASS    AA=A;DP=161     GT:GQ:DP        0|1:100:37      0|1:100:23      0|0:100:61
+1      205488195       rs10864167      A       C       .       PASS    AA=C;DP=127;HM2 GT:GQ:DP        0|1:100:37      0|1:100:23      0|0:100:68
+10     26551788        rs7074534       A       G       .       PASS    AA=G;DP=147     GT:GQ:DP        0|1:100:37      0|1:100:23      0|0:100:85
+16     11096649        rs12917716      G       C       .       PASS    AA=C;DP=149     GT:GQ:DP        0|1:100:37      0|1:100:23      0|0:100:92
+2      215323041       rs13429493      C       T       .       PASS    AA=C;DP=177     GT:GQ:DP        0|1:100:37      0|1:100:26      0|0:100:61
+17     2684347 rs11658501      C       A       .       PASS    AA=C;DP=135     GT:GQ:DP        0|1:100:37      0|1:100:26      0|0:100:74
+16     56852201        rs2550340       C       G       .       PASS    AA=G;DP=146     GT:GQ:DP        0|1:100:37      0|1:100:26      0|0:100:83
+14     36691994        rs8014303       T       C       .       PASS    AA=t;DP=124     GT:GQ:DP        0|1:100:37      0|1:100:27      0|0:100:61
+7      22382436        rs60447703      C       A       .       PASS    AA=A;DP=146     GT:GQ:DP        0|1:100:37      0|1:100:27      0|0:100:82
+2      58233671        rs35844949      G       A       .       PASS    AA=G;DP=169     GT:GQ:DP        0|1:100:37      0|1:100:28      0|0:100:55
+3      187901499       rs57576310      T       A       .       PASS    AA=T;DP=134     GT:GQ:DP        0|1:100:37      0|1:100:29      0|0:100:69
+17     56855115        rs4968433       G       A       .       PASS    AA=A;DP=139     GT:GQ:DP        0|1:100:37      0|1:100:29      0|0:100:73
+16     6809039 rs9929176       T       C       .       PASS    AA=C;DP=143     GT:GQ:DP        0|1:100:37      0|1:100:29      0|0:93:32
+19     39991411        rs60179627      G       T       .       PASS    AA=g;DP=145     GT:GQ:DP        0|1:100:37      0|1:100:29      0|0:94:39
+2      111618512       .       C       T       .       PASS    AA=C;DP=181     GT:GQ:DP        0|1:100:37      0|1:100:30      0|0:100:68
+5      1873557 rs6864000       G       A       .       PASS    AA=G;DP=138     GT:GQ:DP        0|1:100:37      0|1:100:30      0|0:100:72
+16     85303077        rs300008        C       T       .       PASS    AA=C;DP=149     GT:GQ:DP        0|1:100:37      0|1:100:31      0|0:100:81
+1      144970738       rs12122453      C       G       .       PASS    AA=.;DP=163;HM2;HM3     GT:GQ:DP        0|1:100:37      0|1:100:32      0|0:100:96
+3      64596289        rs9837200       A       C       .       PASS    AA=A;DP=179     GT:GQ:DP        0|1:100:37      0|1:100:34      0|0:100:97
+16     77251259        rs2550634       G       A       .       PASS    AA=g;DP=136     GT:GQ:DP        0|1:100:37      0|1:100:35      0|0:100:66
+10     118070125       rs11197631      C       G       .       PASS    AA=C;DP=155     GT:GQ:DP        0|1:100:37      0|1:100:38      0|0:100:82
+2      124697632       rs6541945       G       A       .       PASS    AA=G;DP=141     GT:GQ:DP        0|1:100:37      0|1:100:41      0|0:100:64
+20     28090024        rs34738358      G       A       .       PASS    AA=g;DP=173     GT:GQ:DP        0|1:100:37      0|1:21:37       0|0:100:82
+8      144479991       rs3829019       G       A       .       PASS    AA=G;DP=131     GT:GQ:DP        0|1:100:37      0|1:45:15       0|0:100:71
+5      128210777       rs4610507       C       G       .       PASS    AA=G;DP=99      GT:GQ:DP        0|1:100:37      0|1:47:18       0|0:100:40
+6      6043090 rs7760311       A       G       .       PASS    AA=G;DP=128     GT:GQ:DP        0|1:100:37      0|1:54:22       0|0:100:69
+3      75352605        .       A       G       .       PASS    AA=A;DP=160     GT:GQ:DP        0|1:100:37      0|1:63:24       0|0:100:57
+15     89275240        rs1052532       T       C       .       PASS    AA=T;DP=143     GT:GQ:DP        0|1:100:37      0|1:64:28       0|0:100:77
+8      128774969       .       A       T       .       PASS    AA=A;DP=112     GT:GQ:DP        0|1:100:37      0|1:65:30       0|0:100:36
+17     19890782        rs1421174       G       T       .       PASS    AA=T;DP=94      GT:GQ:DP        0|1:100:37      0|1:68:10       0|0:100:47
+17     72901818        rs60437362      T       C       .       PASS    AA=t;DP=155     GT:GQ:DP        0|1:100:37      0|1:70:18       0|0:100:98
+11     2807358 rs234852        T       C       .       PASS    AA=t;DP=107     GT:GQ:DP        0|1:100:37      0|1:74:22       0|0:100:48
+11     46685547        rs58561056      T       G       .       PASS    AA=T;DP=148     GT:GQ:DP        0|1:100:37      0|1:78:22       0|0:94:44
+16     54486419        rs1946139       C       T       .       PASS    AA=T;DP=154     GT:GQ:DP        0|1:100:37      0|1:84:31       0|0:100:46
+4      69657661        rs6600848       T       C       .       PASS    AA=N;DP=122     GT:GQ:DP        0|1:100:37      1|1:16:17       0|1:100:68
+7      36403072        rs7776518       C       T       .       PASS    AA=C;DP=146     GT:GQ:DP        0|1:100:37      1|1:25:24       0|1:100:48
+1      202106660       rs4598553       C       A       .       PASS    AA=A;DP=125;HM2;HM3     GT:GQ:DP        0|1:100:37      1|1:27:21       0|1:100:70
+14     49577007        rs7140586       C       T       .       PASS    AA=c;DP=132     GT:GQ:DP        0|1:100:37      1|1:28:17       0|1:100:81
+2      12405235        rs1453500       T       C       .       PASS    AA=T;DP=137     GT:GQ:DP        0|1:100:37      1|1:30:22       0|1:100:74
+10     10006089        rs7098846       G       T       .       PASS    AA=T;DP=128     GT:GQ:DP        0|1:100:37      1|1:32:20       0|1:100:74
+3      140647081       rs2289347       C       A       .       PASS    AA=A;DP=119     GT:GQ:DP        0|1:100:37      1|1:33:13       0|1:100:69
+3      128915577       rs599287        T       G       .       PASS    AA=G;DP=153     GT:GQ:DP        0|1:100:37      1|1:33:19       0|1:100:96
+3      72655597        rs6549466       C       T       .       PASS    AA=T;DP=151     GT:GQ:DP        0|1:100:37      1|1:38:23       0|1:100:89
+10     116161681       rs4752638       A       G       .       PASS    AA=G;DP=135     GT:GQ:DP        0|1:100:37      1|1:38:25       0|1:100:74
+20     24167544        rs858068        C       G       .       PASS    AA=C;DP=148     GT:GQ:DP        0|1:100:37      1|1:41:26       0|1:100:87
+3      31280663        rs57269605      G       T       .       PASS    AA=T;DP=107     GT:GQ:DP        0|1:100:37      1|1:42:15       0|1:100:55
+9      7255257 rs1041285       T       G       .       PASS    AA=G;DP=115     GT:GQ:DP        0|1:100:37      1|1:42:15       0|1:100:60
+10     79331458        rs2818831       T       C       .       PASS    AA=N;DP=126     GT:GQ:DP        0|1:100:37      1|1:45:17       0|1:100:72
+1      25169330        rs10751776      A       C       .       PASS    AA=C;DP=131;HM2 GT:GQ:DP        0|1:100:37      1|1:48:17       0|1:100:78
+11     86862455        rs10792957      T       C       .       PASS    AA=T;DP=120     GT:GQ:DP        0|1:100:37      1|1:48:18       0|1:100:65
+4      26725821        rs6833982       T       C       .       PASS    AA=C;DP=125     GT:GQ:DP        0|1:100:37      1|1:48:18       0|1:100:73
+13     109106993       rs9515092       T       C       .       PASS    AA=C;DP=129     GT:GQ:DP        0|1:100:37      1|1:51:18       0|1:100:75
+1      201730263       rs6702882       G       A       .       PASS    AA=G;DP=106     GT:GQ:DP        0|1:100:37      1|1:52:23       0|1:100:46
+11     86295542        rs11607737      G       A       .       PASS    AA=A;DP=122     GT:GQ:DP        0|1:100:37      1|1:54:19       0|1:100:67
+7      71339384        rs1034617       T       A       .       PASS    AA=A;DP=128     GT:GQ:DP        0|1:100:37      1|1:54:19       0|1:100:71
+3      24732262        rs4405860       G       A       .       PASS    AA=A;DP=109     GT:GQ:DP        0|1:100:37      1|1:57:20       0|1:100:54
+10     102358149       rs1343522       T       C       .       PASS    AA=T;DP=154     GT:GQ:DP        0|1:100:37      1|1:60:21       0|1:100:94
+11     5674789 rs10838546      C       A       .       PASS    AA=A;DP=112     GT:GQ:DP        0|1:100:37      1|1:60:22       0|1:100:52
+5      136633320       rs2060426       A       G       .       PASS    AA=G;DP=162     GT:GQ:DP        0|1:100:37      1|1:66:24       0|1:100:62
+15     78658008        rs6495508       G       A       .       PASS    AA=G;DP=141     GT:GQ:DP        0|1:100:37      1|1:66:25       0|1:100:80
+8      87923531        rs1841019       G       T       .       PASS    AA=T;DP=140     GT:GQ:DP        0|1:100:37      1|1:66:25       0|1:100:81
+15     89571255        rs7179149       A       G       .       PASS    AA=A;DP=151     GT:GQ:DP        0|1:100:37      1|1:66:25       0|1:100:91
+3      124676220       rs11719060      C       T       .       PASS    AA=C;DP=116     GT:GQ:DP        0|1:100:37      1|1:69:24       0|1:100:53
+6      9654734 rs10434858      C       T       .       PASS    AA=T;DP=116     GT:GQ:DP        0|1:100:37      1|1:69:26       0|1:100:54
+7      50030384        rs1947947       A       G       .       PASS    AA=G;DP=122     GT:GQ:DP        0|1:100:37      1|1:69:26       0|1:100:58
+6      23873630        rs6911755       T       C       .       PASS    AA=T;DP=145     GT:GQ:DP        0|1:100:37      1|1:72:31       0|1:100:77
+11     71684798        rs472837        C       T       .       PASS    AA=A;DP=158     GT:GQ:DP        0|1:100:37      1|1:75:26       0|1:100:53
+3      136415076       rs874738        G       A       .       PASS    AA=A;DP=152     GT:GQ:DP        0|1:100:37      1|1:75:26       0|1:100:89
+4      156045018       rs28628694      C       G       .       PASS    AA=G;DP=154     GT:GQ:DP        0|1:100:37      1|1:75:27       0|1:100:87
+16     5708040 rs9939075       G       A       .       PASS    AA=G;DP=141     GT:GQ:DP        0|1:100:37      1|1:76:28       0|1:100:77
+1      7605327 rs12138735      A       G       .       PASS    AA=G;DP=174;HM2 GT:GQ:DP        0|1:100:37      1|1:78:27       0|1:100:62
+10     44562911        rs10793557      G       T       .       PASS    AA=T;DP=136     GT:GQ:DP        0|1:100:37      1|1:84:29       0|1:100:71
+9      9382387 rs2382004       T       G       .       PASS    AA=G;DP=145     GT:GQ:DP        0|1:100:37      1|1:90:31       0|1:100:77
+10     133456074       rs4897778       C       A       .       PASS    AA=A;DP=123     GT:GQ:DP        0|1:100:37      1|1:9:15        0|1:100:72
+4      76602704        rs17000572      G       A       .       PASS    AA=G;DP=136     GT:GQ:DP        0|1:100:38      0|0:100:33      0|0:100:66
+6      43898557        rs56933488      C       G       .       PASS    AA=C;DP=142     GT:GQ:DP        0|1:100:38      0|0:100:33      0|0:100:69
+7      66825751        .       T       A       .       PASS    AA=T;DP=150     GT:GQ:DP        0|1:100:38      0|0:100:33      0|0:100:79
+1      174676524       rs12567704      T       C       .       PASS    AA=T;DP=187;HM2;HM3     GT:GQ:DP        0|1:100:38      0|0:100:34      0|0:100:64
+14     99440911        .       T       C       .       PASS    AA=T;DP=129     GT:GQ:DP        0|1:100:38      0|0:100:35      0|0:100:56
+11     70620950        rs3020025       A       T       .       PASS    AA=A;DP=135     GT:GQ:DP        0|1:100:38      0|0:100:36      0|0:100:62
+2      74156945        .       C       T       .       PASS    AA=C;DP=150     GT:GQ:DP        0|1:100:38      0|0:100:36      0|0:100:81
+10     1201817 rs60369097      A       G       .       PASS    AA=G;DP=168     GT:GQ:DP        0|1:100:38      0|0:100:37      0|0:100:53
+10     90835015        rs7094490       G       T       .       PASS    AA=G;DP=179     GT:GQ:DP        0|1:100:38      0|0:100:40      0|0:100:48
+3      130428398       rs60661714      T       G       .       PASS    AA=T;DP=187     GT:GQ:DP        0|1:100:38      0|0:100:43      0|0:100:44
+17     38202238        rs61755635      G       A       .       PASS    AA=G;DP=143     GT:GQ:DP        0|1:100:38      0|0:11:10       0|0:100:46
+18     57829263        rs566666        T       C       .       PASS    AA=T;DP=133     GT:GQ:DP        0|1:100:38      0|0:29:8        0|0:100:46
+22     25424241        rs2157599       A       C       .       PASS    AA=C;DP=139     GT:GQ:DP        0|1:100:38      0|0:31:20       0|0:100:81
+17     75293237        rs9907328       T       C       .       PASS    AA=t;DP=114     GT:GQ:DP        0|1:100:38      0|0:38:11       0|0:100:65
+20     55469384        .       G       A       .       PASS    AA=G;DP=114     GT:GQ:DP        0|1:100:38      0|0:38:11       0|0:100:66
+5      511793  .       C       T       .       PASS    AA=C;DP=138     GT:GQ:DP        0|1:100:38      0|0:43:24       0|0:100:77
+12     108399078       rs10850234      A       C       .       PASS    AA=A;DP=136     GT:GQ:DP        0|1:100:38      0|0:43:24       0|0:74:31
+5      127264119       rs245161        G       A       .       PASS    AA=G;DP=149     GT:GQ:DP        0|1:100:38      0|0:43:27       0|0:100:38
+16     50608758        rs11076294      C       G       .       PASS    AA=c;DP=111     GT:GQ:DP        0|1:100:38      0|0:44:13       0|0:100:60
+1      240202569       .       C       T       .       PASS    AA=.;DP=131     GT:GQ:DP        0|1:100:38      0|0:44:13       0|0:100:80
+3      134977044       rs1049296       C       T       .       PASS    AA=C;DP=152     GT:GQ:DP        0|1:100:38      0|0:47:14       0|0:100:99
+2      104902536       rs60060015      A       G       .       PASS    AA=A;DP=151     GT:GQ:DP        0|1:100:38      0|0:49:21       0|0:100:50
+18     8543091 rs13381208      T       C       .       PASS    AA=T;DP=145     GT:GQ:DP        0|1:100:38      0|0:49:21       0|0:100:87
+6      159427336       rs9355697       T       C       .       PASS    AA=T;DP=148     GT:GQ:DP        0|1:100:38      0|0:49:26       0|0:100:81
+16     3735293 rs129974        G       T       .       PASS    AA=G;DP=150     GT:GQ:DP        0|1:100:38      0|0:49:26       0|0:100:87
+11     95007584        rs61904060      G       T       .       PASS    AA=T;DP=145     GT:GQ:DP        0|1:100:38      0|0:49:28       0|0:100:83
+14     68918680        .       G       C       .       PASS    AA=G;DP=119     GT:GQ:DP        0|1:100:38      0|0:51:21       0|0:100:62
+2      23682650        rs583168        G       A       .       PASS    AA=A;DP=140     GT:GQ:DP        0|1:100:38      0|0:53:16       0|0:100:89
+3      123885464       rs59887682      A       T       .       PASS    AA=A;DP=156     GT:GQ:DP        0|1:100:38      0|0:53:17       0|0:100:54
+8      131775237       .       C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        0|1:100:38      0|0:53:17       0|0:100:54
+2      161617615       rs13399728      A       G       .       PASS    AA=A;DP=126     GT:GQ:DP        0|1:100:38      0|0:53:17       0|0:100:63
+8      10975764        .       C       T       .       PASS    AA=C;DP=131     GT:GQ:DP        0|1:100:38      0|0:53:18       0|0:100:71
+2      14835955        .       G       C       .       PASS    AA=G;DP=149     GT:GQ:DP        0|1:100:38      0|0:55:22       0|0:100:50
+9      70894647        rs953588        C       T       .       PASS    AA=T;DP=142     GT:GQ:DP        0|1:100:38      0|0:56:18       0|0:100:87
+2      19903376        .       T       C       .       PASS    AA=T;DP=130     GT:GQ:DP        0|1:100:38      0|0:58:20       0|0:100:74
+16     56293401        rs7196016       G       C       .       PASS    AA=G;DP=166     GT:GQ:DP        0|1:100:38      0|0:59:18       0|0:100:67
+14     98886330        rs731347        C       T       .       PASS    AA=C;DP=132     GT:GQ:DP        0|1:100:38      0|0:59:18       0|0:100:76
+8      137412078       rs7844280       T       C       .       PASS    AA=C;DP=146     GT:GQ:DP        0|1:100:38      0|0:59:18       0|0:100:93
+1      155150171       .       A       G       .       PASS    AA=A;DP=138     GT:GQ:DP        0|1:100:38      0|0:59:20       0|0:100:76
+13     44150772        rs17066050      C       T       .       PASS    AA=T;DP=138     GT:GQ:DP        0|1:100:38      0|0:59:20       0|0:100:80
+9      8641483 .       G       T       .       PASS    AA=G;DP=144     GT:GQ:DP        0|1:100:38      0|0:60:25       0|0:100:81
+17     24589666        .       G       A       .       PASS    AA=G;DP=122     GT:GQ:DP        0|1:100:38      0|0:62:19       0|0:100:64
+1      78530762        rs56027754      T       G       .       PASS    AA=T;DP=120     GT:GQ:DP        0|1:100:38      0|0:62:19       0|0:100:65
+14     89672738        rs17799142      G       A       .       PASS    AA=G;DP=126     GT:GQ:DP        0|1:100:38      0|0:62:20       0|0:100:68
+8      50501530        .       G       A       .       PASS    AA=.;DP=132     GT:GQ:DP        0|1:100:38      0|0:62:20       0|0:100:76
+17     77917842        rs10852796      C       G       .       PASS    AA=G;DP=135     GT:GQ:DP        0|1:100:38      0|0:62:22       0|0:100:72
+1      200378812       .       A       G       .       PASS    AA=A;DP=141     GT:GQ:DP        0|1:100:38      0|0:64:23       0|0:100:79
+7      86694388        rs11975795      G       T       .       PASS    AA=G;DP=166     GT:GQ:DP        0|1:100:38      0|0:65:20       0|0:100:68
+5      7271261 .       G       A       .       PASS    AA=.;DP=130     GT:GQ:DP        0|1:100:38      0|0:65:20       0|0:100:74
+21     46379718        .       C       G       .       PASS    AA=C;DP=137     GT:GQ:DP        0|1:100:38      0|0:65:20       0|0:100:80
+6      143009194       rs1876842       T       C       .       PASS    AA=C;DP=139     GT:GQ:DP        0|1:100:38      0|0:65:21       0|0:100:82
+8      62956636        .       T       C       .       PASS    AA=T;DP=158     GT:GQ:DP        0|1:100:38      0|0:68:21       0|0:100:59
+1      30750317        rs59006098      G       A       .       PASS    AA=A;DP=123     GT:GQ:DP        0|1:100:38      0|0:68:21       0|0:100:66
+15     47836565        .       G       A       .       PASS    AA=g;DP=148     GT:GQ:DP        0|1:100:38      0|0:68:21       0|0:100:89
+9      20559126        rs7019937       T       C       .       PASS    AA=T;DP=164     GT:GQ:DP        0|1:100:38      0|0:68:22       0|0:100:59
+8      96768123        rs1484583       C       A       .       PASS    AA=C;DP=129     GT:GQ:DP        0|1:100:38      0|0:68:22       0|0:100:66
+1      116112490       rs4074536       T       C       .       PASS    AA=C;DP=134;HM2;HM3     GT:GQ:DP        0|1:100:38      0|0:68:22       0|0:100:76
+2      169682042       .       A       G       .       PASS    AA=A;DP=118     GT:GQ:DP        0|1:100:38      0|0:68:23       0|0:100:56
+3      195190048       rs62288185      C       A       .       PASS    AA=C;DP=149     GT:GQ:DP        0|1:100:38      0|0:69:33       0|0:100:78
+17     53003917        rs60345401      C       T       .       PASS    AA=C;DP=167     GT:GQ:DP        0|1:100:38      0|0:71:22       0|0:100:53
+10     108551998       rs12248379      G       T       .       PASS    AA=g;DP=163     GT:GQ:DP        0|1:100:38      0|0:71:22       0|0:100:57
+20     44989452        rs62201225      G       C       .       PASS    AA=G;DP=159     GT:GQ:DP        0|1:100:38      0|0:71:23       0|0:100:49
+1      205425582       .       C       T       .       PASS    AA=C;DP=127     GT:GQ:DP        0|1:100:38      0|0:71:23       0|0:100:64
+3      54289836        rs12374128      T       A       .       PASS    AA=T;DP=170     GT:GQ:DP        0|1:100:38      0|0:71:24       0|0:100:49
+15     27624469        rs11636798      C       T       .       PASS    AA=C;DP=147     GT:GQ:DP        0|1:100:38      0|0:72:31       0|0:100:81
+3      192981764       rs6792568       T       G       .       PASS    AA=T;DP=147     GT:GQ:DP        0|1:100:38      0|0:73:26       0|0:100:78
+4      78319743        rs6851055       G       A       .       PASS    AA=.;DP=157     GT:GQ:DP        0|1:100:38      0|0:74:23       0|0:100:46
+1      234802101       .       G       A       .       PASS    AA=G;DP=133     GT:GQ:DP        0|1:100:38      0|0:74:23       0|0:100:70
+2      173967685       rs11689493      T       C       .       PASS    AA=T;DP=150     GT:GQ:DP        0|1:100:38      0|0:74:23       0|0:100:90
+20     46806224        rs6066843       C       G       .       PASS    AA=C;DP=153     GT:GQ:DP        0|1:100:38      0|0:74:23       0|0:100:96
+1      50504265        .       C       T       .       PASS    AA=C;DP=125     GT:GQ:DP        0|1:100:38      0|0:74:24       0|0:100:65
+7      47744187        rs17627420      C       T       .       PASS    AA=C;DP=150     GT:GQ:DP        0|1:100:38      0|0:74:24       0|0:100:89
+16     66843659        rs28536091      T       A       .       PASS    AA=T;DP=148     GT:GQ:DP        0|1:100:38      0|0:75:24       0|0:100:46
+3      69963363        rs17638538      A       T       .       PASS    AA=T;DP=140     GT:GQ:DP        0|1:100:38      0|0:77:24       0|0:100:41
+6      31253970        rs3871248       C       T       .       PASS    AA=c;DP=155     GT:GQ:DP        0|1:100:38      0|0:77:24       0|0:100:54
+9      93484651        rs10820896      C       T       .       PASS    AA=C;DP=134     GT:GQ:DP        0|1:100:38      0|0:77:25       0|0:100:71
+2      69102034        .       T       A       .       PASS    AA=T;DP=161     GT:GQ:DP        0|1:100:38      0|0:77:26       0|0:100:49
+5      151876268       .       G       A       .       PASS    AA=G;DP=151     GT:GQ:DP        0|1:100:38      0|0:77:32       0|0:100:39
+3      196235074       .       C       T       .       PASS    AA=C;DP=174     GT:GQ:DP        0|1:100:38      0|0:77:34       0|0:100:61
+1      22554720        rs11578020      C       T       .       PASS    AA=C;DP=137;HM2;HM3     GT:GQ:DP        0|1:100:38      0|0:80:26       0|0:100:75
+12     34153277        .       C       T       .       PASS    AA=c;DP=160     GT:GQ:DP        0|1:100:38      0|0:80:26       0|0:100:97
+6      39461379        rs35249324      G       A       .       PASS    AA=g;DP=159     GT:GQ:DP        0|1:100:38      0|0:80:27       0|0:100:98
+11     123765286       .       G       T       .       PASS    AA=-;DP=162     GT:GQ:DP        0|1:100:38      0|0:80:29       0|0:100:101
+17     53495264        rs9912916       G       C       .       PASS    AA=G;DP=157     GT:GQ:DP        0|1:100:38      0|0:81:31       0|0:100:44
+10     111198265       .       A       G       .       PASS    AA=A;DP=153     GT:GQ:DP        0|1:100:38      0|0:83:26       0|0:100:43
+5      59270257        .       C       T       .       PASS    AA=C;DP=124     GT:GQ:DP        0|1:100:38      0|0:83:27       0|0:100:62
+1      64427585        .       G       A       .       PASS    AA=G;DP=148     GT:GQ:DP        0|1:100:38      0|0:83:27       0|0:100:83
+8      6130888 .       C       T       .       PASS    AA=c;DP=153     GT:GQ:DP        0|1:100:38      0|0:83:27       0|0:100:88
+5      169980727       .       G       A       .       PASS    AA=G;DP=146     GT:GQ:DP        0|1:100:38      0|0:83:28       0|0:100:84
+14     30737723        .       G       A       .       PASS    AA=G;DP=135     GT:GQ:DP        0|1:100:38      0|0:86:28       0|0:100:69
+17     73905875        .       A       G       .       PASS    AA=A;DP=157     GT:GQ:DP        0|1:100:38      0|0:86:28       0|0:100:96
+10     33995588        rs16934733      C       T       .       PASS    AA=C;DP=152     GT:GQ:DP        0|1:100:38      0|0:86:30       0|0:100:82
+6      166686786       .       C       G       .       PASS    AA=C;DP=142     GT:GQ:DP        0|1:100:38      0|0:89:28       0|0:100:76
+8      6615071 .       G       A       .       PASS    AA=A;DP=151     GT:GQ:DP        0|1:100:38      0|0:89:28       0|0:100:82
+9      20176459        rs13284316      C       T       .       PASS    AA=T;DP=149     GT:GQ:DP        0|1:100:38      0|0:89:28       0|0:100:83
+1      62540388        rs17123402      C       G       .       PASS    AA=C;DP=158;HM2 GT:GQ:DP        0|1:100:38      0|0:89:28       0|0:100:94
+9      124553120       .       T       C       .       PASS    AA=T;DP=163     GT:GQ:DP        0|1:100:38      0|0:92:29       0|0:100:47
+20     44397643        rs2425874       T       C       .       PASS    AA=T;DP=131     GT:GQ:DP        0|1:100:38      0|0:92:29       0|0:100:59
+2      119930572       .       T       G       .       PASS    AA=t;DP=157     GT:GQ:DP        0|1:100:38      0|0:95:30       0|0:100:42
+20     43228258        rs62208390      A       C       .       PASS    AA=C;DP=150     GT:GQ:DP        0|1:100:38      0|0:95:30       0|0:100:84
+8      97018974        .       G       A       .       PASS    AA=G;DP=131     GT:GQ:DP        0|1:100:38      0|0:98:31       0|0:100:64
+9      16889897        rs10119555      C       A       .       PASS    AA=A;DP=146     GT:GQ:DP        0|1:100:38      0|0:98:31       0|0:100:75
+7      140946965       rs7785809       A       G       .       PASS    AA=G;DP=154     GT:GQ:DP        0|1:100:38      0|0:98:31       0|0:100:86
+4      14774588        rs55919430      T       C       .       PASS    AA=t;DP=171     GT:GQ:DP        0|1:100:38      0|0:98:33       0|0:100:62
+4      1831333 rs28560064      C       T       .       PASS    AA=c;DP=116     GT:GQ:DP        0|1:100:38      0|1:100:11      0|0:100:68
+10     121926192       .       C       T       .       PASS    AA=C;DP=122     GT:GQ:DP        0|1:100:38      0|1:100:18      0|0:100:65
+5      176436338       rs6879387       C       T       .       PASS    AA=C;DP=134     GT:GQ:DP        0|1:100:38      0|1:100:18      0|0:100:84
+13     102099012       rs662130        T       C       .       PASS    AA=C;DP=108     GT:GQ:DP        0|1:100:38      0|1:100:18      0|0:91:40
+7      24902623        rs136   C       T       .       PASS    AA=C;DP=148     GT:GQ:DP        0|1:100:38      0|1:100:24      0|0:100:47
+10     101655957       rs10883419      T       C       .       PASS    AA=C;DP=139     GT:GQ:DP        0|1:100:38      0|1:100:24      0|0:100:78
+3      52851575        rs4687667       A       C       .       PASS    AA=C;DP=168     GT:GQ:DP        0|1:100:38      0|1:100:25      0|0:100:105
+12     123033157       rs35099862      C       A       .       PASS    AA=A;DP=149     GT:GQ:DP        0|1:100:38      0|1:100:25      0|0:100:86
+12     120894047       rs658957        T       C       .       PASS    AA=T;DP=162     GT:GQ:DP        0|1:100:38      0|1:100:26      0|0:100:52
+3      51415561        .       A       G       .       PASS    AA=a;DP=136     GT:GQ:DP        0|1:100:38      0|1:100:27      0|0:100:69
+12     124667663       rs56711923      T       C       .       PASS    AA=C;DP=143     GT:GQ:DP        0|1:100:38      0|1:100:27      0|0:100:81
+14     54664408        rs57064758      T       A       .       PASS    AA=T;DP=161     GT:GQ:DP        0|1:100:38      0|1:100:28      0|0:100:52
+6      130191479       rs6928716       A       G       .       PASS    AA=A;DP=147     GT:GQ:DP        0|1:100:38      0|1:100:31      0|0:100:68
+2      218447280       rs3791948       C       T       .       PASS    AA=T;DP=164     GT:GQ:DP        0|1:100:38      0|1:100:32      0|0:100:48
+1      182249781       rs4651164       A       T       .       PASS    AA=A;DP=157;HM2;HM3     GT:GQ:DP        0|1:100:38      0|1:100:35      0|0:100:85
+12     434253  rs4980912       T       A       .       PASS    AA=A;DP=177     GT:GQ:DP        0|1:100:38      0|1:100:40      0|0:100:55
+16     79333773        .       A       C       .       PASS    AA=a;DP=168     GT:GQ:DP        0|1:100:38      0|1:26:28       0|0:100:102
+6      81358815        rs11963932      G       A       .       PASS    AA=A;DP=141     GT:GQ:DP        0|1:100:38      0|1:33:24       0|0:100:82
+4      70501620        rs11946584      T       C       .       PASS    AA=C;DP=128     GT:GQ:DP        0|1:100:38      0|1:74:19       0|0:100:70
+6      108160671       rs6568491       A       T       .       PASS    AA=T;DP=140     GT:GQ:DP        0|1:100:38      0|1:74:20       0|0:100:84
+21     45225290        .       A       G       .       PASS    AA=A;DP=119     GT:GQ:DP        0|1:100:38      0|1:76:18       0|0:100:63
+4      90381018        rs7682863       C       A       .       PASS    AA=A;DP=112     GT:GQ:DP        0|1:100:38      0|1:77:23       0|0:100:51
+13     98381414        rs912683        C       G       .       PASS    AA=G;DP=128     GT:GQ:DP        0|1:100:38      0|1:82:21       0|0:72:25
+3      195926602       rs6799823       A       G       .       PASS    AA=G;DP=142     GT:GQ:DP        0|1:100:38      0|1:87:21       0|0:100:84
+5      31974312        rs10053131      G       A       .       PASS    AA=G;DP=139     GT:GQ:DP        0|1:100:38      0|1:90:12       0|0:100:49
+2      228276844       rs55683694      T       C       .       PASS    AA=T;DP=128     GT:GQ:DP        0|1:100:38      0|1:95:20       0|0:100:69
+6      39831228        rs302554        C       G       .       PASS    AA=G;DP=157     GT:GQ:DP        0|1:100:38      1|1:100:37      0|1:100:39
+8      74600166        rs4385460       C       T       .       PASS    AA=T;DP=134     GT:GQ:DP        0|1:100:38      1|1:100:37      0|1:100:58
+1      158771839       rs12036873      G       A       .       PASS    AA=A;DP=149;HM2 GT:GQ:DP        0|1:100:38      1|1:100:37      0|1:100:71
+2      183744715       rs1882444       C       T       .       PASS    AA=C;DP=108     GT:GQ:DP        0|1:100:38      1|1:24:10       0|1:100:59
+10     50151219        rs7098191       A       G       .       PASS    AA=G;DP=123     GT:GQ:DP        0|1:100:38      1|1:30:12       0|1:100:60
+5      170848841       rs3097838       T       C       .       PASS    AA=C;DP=141     GT:GQ:DP        0|1:100:38      1|1:30:18       0|1:100:86
+16     1916669 rs1742407       G       A       .       PASS    AA=G;DP=130     GT:GQ:DP        0|1:100:38      1|1:36:13       0|1:100:82
+20     44860066        rs6018054       C       T       .       PASS    AA=C;DP=125     GT:GQ:DP        0|1:100:38      1|1:43:23       0|1:100:64
+17     37787690        rs6503698       T       C       .       PASS    AA=C;DP=128     GT:GQ:DP        0|1:100:38      1|1:45:17       0|1:100:74
+8      81104552        rs10957952      T       C       .       PASS    AA=C;DP=126     GT:GQ:DP        0|1:100:38      1|1:48:17       0|1:100:68
+2      45000050        rs559503        A       C       .       PASS    AA=C;DP=137     GT:GQ:DP        0|1:100:38      1|1:48:17       0|1:100:81
+16     72189172        rs12933079      A       C       .       PASS    AA=N;DP=149     GT:GQ:DP        0|1:100:38      1|1:48:25       0|1:100:86
+5      168149345       rs891928        C       T       .       PASS    AA=T;DP=147     GT:GQ:DP        0|1:100:38      1|1:50:29       0|1:100:84
+11     78415504        rs7126789       C       T       .       PASS    AA=c;DP=135     GT:GQ:DP        0|1:100:38      1|1:54:21       0|1:100:80
+20     2008151 rs1418029       G       A       .       PASS    AA=G;DP=145     GT:GQ:DP        0|1:100:38      1|1:57:20       0|1:100:86
+7      148094024       rs11768249      T       C       .       PASS    AA=T;DP=116     GT:GQ:DP        0|1:100:38      1|1:57:22       0|1:100:57
+2      96696529        .       G       C       .       PASS    AA=G;DP=124     GT:GQ:DP        0|1:100:38      1|1:59:23       0|1:100:63
+10     49821622        rs2943250       G       A       .       PASS    AA=G;DP=146     GT:GQ:DP        0|1:100:38      1|1:60:22       0|1:100:37
+2      216976181       rs2666286       T       C       .       PASS    AA=C;DP=152     GT:GQ:DP        0|1:100:38      1|1:60:25       0|1:100:89
+2      193148228       rs1515344       C       T       .       PASS    AA=T;DP=135     GT:GQ:DP        0|1:100:38      1|1:63:23       0|1:100:76
+8      35017175        rs9642752       T       C       .       PASS    AA=C;DP=122     GT:GQ:DP        0|1:100:38      1|1:65:29       0|1:100:54
+8      8495699 rs17154302      G       T       .       PASS    AA=G;DP=153     GT:GQ:DP        0|1:100:38      1|1:69:24       0|1:100:86
+16     79485273        rs12445413      G       A       .       PASS    AA=G;DP=141     GT:GQ:DP        0|1:100:38      1|1:72:25       0|1:100:77
+5      31864138        rs6887586       C       T       .       PASS    AA=T;DP=127     GT:GQ:DP        0|1:100:38      1|1:72:26       0|1:100:66
+2      231759040       rs10202782      A       G       .       PASS    AA=G;DP=143     GT:GQ:DP        0|1:100:38      1|1:78:28       0|1:100:78
+13     23639868        rs1220582       G       T       .       PASS    AA=G;DP=140     GT:GQ:DP        0|1:100:38      1|1:80:34       0|1:100:68
+16     83637985        rs8045099       G       A       .       PASS    AA=A;DP=158     GT:GQ:DP        0|1:100:38      1|1:84:29       0|1:100:91
+19     40377327        rs10424585      A       G       .       PASS    AA=A;DP=143     GT:GQ:DP        0|1:100:38      1|1:84:31       0|1:100:75
+9      37483182        rs754951        C       G       .       PASS    AA=G;DP=154     GT:GQ:DP        0|1:100:38      1|1:90:31       0|1:100:85
+14     99504514        rs1191033       G       T       .       PASS    AA=T;DP=153     GT:GQ:DP        0|1:100:38      1|1:93:32       0|1:100:83
+2      40221281        rs6735142       C       T       .       PASS    AA=T;DP=161     GT:GQ:DP        0|1:100:38      1|1:93:32       0|1:100:89
+1      204978142       rs11809303      A       G       .       PASS    AA=A;DP=147     GT:GQ:DP        0|1:100:39      0|0:100:32      0|0:100:77
+2      152919204       rs34581620      T       A       .       PASS    AA=T;DP=150     GT:GQ:DP        0|1:100:39      0|0:100:34      0|0:100:77
+9      27467904        .       C       G       .       PASS    AA=C;DP=146     GT:GQ:DP        0|1:100:39      0|0:100:34      0|0:100:77
+11     87542538        rs16913587      G       C       .       PASS    AA=G;DP=174     GT:GQ:DP        0|1:100:39      0|0:100:35      0|0:100:101
+13     21273611        .       T       G       .       PASS    AA=T;DP=158     GT:GQ:DP        0|1:100:39      0|0:100:37      0|0:100:85
+17     15340064        rs62072571      C       A       .       PASS    AA=T;DP=172     GT:GQ:DP        0|1:100:39      0|0:100:45      0|0:100:46
+11     44350640        rs60750748      C       T       .       PASS    AA=C;DP=100     GT:GQ:DP        0|1:100:39      0|0:41:18       0|0:90:33
+3      14664138        rs1972771       C       A       .       PASS    AA=C;DP=130     GT:GQ:DP        0|1:100:39      0|0:41:23       0|0:100:69
+5      120680120       rs6879181       C       T       .       PASS    AA=C;DP=141     GT:GQ:DP        0|1:100:39      0|0:42:21       0|0:100:83
+1      45556230        .       C       T       .       PASS    AA=c;DP=147     GT:GQ:DP        0|1:100:39      0|0:44:13       0|0:100:75
+6      166950074       .       G       A       .       PASS    AA=G;DP=140     GT:GQ:DP        0|1:100:39      0|0:44:13       0|0:100:92
+16     47241421        rs4493038       A       G       .       PASS    AA=G;DP=121     GT:GQ:DP        0|1:100:39      0|0:47:14       0|0:100:70
+5      180396556       .       T       C       .       PASS    AA=C;DP=128     GT:GQ:DP        0|1:100:39      0|0:50:16       0|0:100:73
+16     74308024        .       T       A       .       PASS    AA=T;DP=142     GT:GQ:DP        0|1:100:39      0|0:52:25       0|0:100:78
+14     32523175        rs17099805      G       A       .       PASS    AA=G;DP=141     GT:GQ:DP        0|1:100:39      0|0:52:27       0|0:100:75
+9      2777528 .       A       G       .       PASS    AA=A;DP=131     GT:GQ:DP        0|1:100:39      0|0:53:17       0|0:100:75
+6      25799276        rs6942245       C       T       .       PASS    AA=C;DP=146     GT:GQ:DP        0|1:100:39      0|0:53:18       0|0:100:45
+8      42487738        .       G       T       .       PASS    AA=G;DP=124     GT:GQ:DP        0|1:100:39      0|0:56:17       0|0:100:68
+22     26475214        rs45619034      G       A       .       PASS    AA=G;DP=127     GT:GQ:DP        0|1:100:39      0|0:56:17       0|0:100:70
+12     46082536        rs59412835      A       G       .       PASS    AA=A;DP=131     GT:GQ:DP        0|1:100:39      0|0:56:17       0|0:100:71
+7      31085775        rs28403521      T       C       .       PASS    AA=T;DP=136     GT:GQ:DP        0|1:100:39      0|0:56:17       0|0:100:82
+10     113779698       .       A       C       .       PASS    AA=C;DP=146     GT:GQ:DP        0|1:100:39      0|0:58:24       0|0:100:87
+17     70610144        .       C       T       .       PASS    AA=C;DP=167     GT:GQ:DP        0|1:100:39      0|0:59:18       0|0:100:61
+17     73401207        rs7222222       C       T       .       PASS    AA=T;DP=144     GT:GQ:DP        0|1:100:39      0|0:59:18       0|0:100:88
+13     75134776        rs12873543      C       A       .       PASS    AA=C;DP=127     GT:GQ:DP        0|1:100:39      0|0:59:26       0|0:100:56
+14     95550667        rs58672844      G       T       .       PASS    AA=G;DP=138     GT:GQ:DP        0|1:100:39      0|0:60:30       0|0:100:67
+2      41438271        .       A       C       .       PASS    AA=C;DP=131     GT:GQ:DP        0|1:100:39      0|0:62:19       0|0:100:75
+12     18693264        .       G       A       .       PASS    AA=g;DP=122     GT:GQ:DP        0|1:100:39      0|0:62:20       0|0:100:65
+1      16554040        .       G       A       .       PASS    AA=G;DP=132     GT:GQ:DP        0|1:100:39      0|0:62:22       0|0:100:72
+9      99571837        rs6478391       T       C       .       PASS    AA=N;DP=135     GT:GQ:DP        0|1:100:39      0|0:65:20       0|0:100:79
+15     66540522        rs12437516      G       A       .       PASS    AA=G;DP=136     GT:GQ:DP        0|1:100:39      0|0:65:21       0|0:100:78
+4      177476332       rs1454160       T       C       .       PASS    AA=T;DP=142     GT:GQ:DP        0|1:100:39      0|0:68:21       0|0:100:37
+19     45621272        .       G       A       .       PASS    AA=G;DP=136     GT:GQ:DP        0|1:100:39      0|0:68:21       0|0:100:80
+11     101862551       rs10750643      A       C       .       PASS    AA=A;DP=125     GT:GQ:DP        0|1:100:39      0|0:68:22       0|0:100:65
+3      61806059        rs17065496      A       G       .       PASS    AA=A;DP=124     GT:GQ:DP        0|1:100:39      0|0:68:22       0|0:100:66
+14     23257863        rs10134608      G       C       .       PASS    AA=g;DP=148     GT:GQ:DP        0|1:100:39      0|0:68:23       0|0:100:88
+6      154857903       .       C       T       .       PASS    AA=C;DP=146     GT:GQ:DP        0|1:100:39      0|0:68:24       0|0:100:81
+3      18564148        rs58695406      G       C       .       PASS    AA=g;DP=128     GT:GQ:DP        0|1:100:39      0|0:71:22       0|0:100:70
+13     50611739        rs7333415       C       T       .       PASS    AA=t;DP=138     GT:GQ:DP        0|1:100:39      0|0:71:23       0|0:100:77
+9      86896439        .       A       G       .       PASS    AA=A;DP=162     GT:GQ:DP        0|1:100:39      0|0:74:23       0|0:100:55
+20     50291163        .       G       A       .       PASS    AA=G;DP=133     GT:GQ:DP        0|1:100:39      0|0:74:23       0|0:100:70
+10     4776297 rs11252698      C       T       .       PASS    AA=C;DP=136     GT:GQ:DP        0|1:100:39      0|0:74:23       0|0:100:78
+5      26435054        rs10069613      C       T       .       PASS    AA=C;DP=128     GT:GQ:DP        0|1:100:39      0|0:74:24       0|0:100:65
+19     16940281        rs16981511      T       C       .       PASS    AA=T;DP=136     GT:GQ:DP        0|1:100:39      0|0:74:24       0|0:100:75
+8      53990162        .       A       T       .       PASS    AA=T;DP=141     GT:GQ:DP        0|1:100:39      0|0:74:24       0|0:100:78
+2      238611128       rs821511        G       C       .       PASS    AA=G;DP=99      GT:GQ:DP        0|1:100:39      0|0:74:24       0|0:81:27
+14     102609528       rs7149290       A       G       .       PASS    AA=a;DP=165     GT:GQ:DP        0|1:100:39      0|0:74:25       0|0:100:60
+9      70326518        rs56927673      C       T       .       PASS    AA=C;DP=147     GT:GQ:DP        0|1:100:39      0|0:75:28       0|0:100:79
+9      70956832        .       G       A       .       PASS    AA=G;DP=145     GT:GQ:DP        0|1:100:39      0|0:77:24       0|0:100:68
+1      26574035        .       C       T       .       PASS    AA=C;DP=145     GT:GQ:DP        0|1:100:39      0|0:77:25       0|0:100:84
+7      66029858        .       A       T       .       PASS    AA=a;DP=111     GT:GQ:DP        0|1:100:39      0|0:77:26       0|0:100:34
+7      86381171        .       T       C       .       PASS    AA=T;DP=138     GT:GQ:DP        0|1:100:39      0|0:77:26       0|0:100:75
+2      23332127        .       T       C       .       PASS    AA=T;DP=126     GT:GQ:DP        0|1:100:39      0|0:77:27       0|0:100:63
+6      118704792       .       G       A       .       PASS    AA=G;DP=141     GT:GQ:DP        0|1:100:39      0|0:80:25       0|0:100:76
+14     99633515        rs11846716      C       T       .       PASS    AA=C;DP=141     GT:GQ:DP        0|1:100:39      0|0:80:26       0|0:100:76
+3      187197033       .       A       G       .       PASS    AA=A;DP=166     GT:GQ:DP        0|1:100:39      0|0:80:28       0|0:100:48
+11     131527243       .       A       G       .       PASS    AA=A;DP=142     GT:GQ:DP        0|1:100:39      0|0:83:26       0|0:100:76
+3      126256444       .       G       A       .       PASS    AA=G;DP=142     GT:GQ:DP        0|1:100:39      0|0:83:26       0|0:100:77
+3      141789390       rs164346        G       T       .       PASS    AA=G;DP=141     GT:GQ:DP        0|1:100:39      0|0:83:26       0|0:100:78
+12     51397149        .       G       A       .       PASS    AA=G;DP=134     GT:GQ:DP        0|1:100:39      0|0:83:27       0|0:100:66
+10     105393212       .       C       T       .       PASS    AA=C;DP=186     GT:GQ:DP        0|1:100:39      0|0:83:28       0|0:100:64
+19     43573820        .       A       G       .       PASS    AA=a;DP=137     GT:GQ:DP        0|1:100:39      0|0:83:30       0|0:100:68
+7      23710722        rs11978661      G       A       .       PASS    AA=G;DP=149     GT:GQ:DP        0|1:100:39      0|0:84:28       0|0:100:83
+12     20135297        rs4237919       A       G       .       PASS    AA=a;DP=145     GT:GQ:DP        0|1:100:39      0|0:86:27       0|0:100:82
+2      199546618       .       C       G       .       PASS    AA=C;DP=147     GT:GQ:DP        0|1:100:39      0|0:86:27       0|0:100:83
+2      213695732       rs7580022       C       G       .       PASS    AA=C;DP=125     GT:GQ:DP        0|1:100:39      0|0:86:28       0|0:100:55
+11     111226890       rs621440        C       T       .       PASS    AA=C;DP=125     GT:GQ:DP        0|1:100:39      0|0:86:28       0|0:100:58
+4      140757370       rs28662808      C       T       .       PASS    AA=C;DP=144     GT:GQ:DP        0|1:100:39      0|0:89:28       0|0:100:79
+4      41869025        .       A       G       .       PASS    AA=A;DP=168     GT:GQ:DP        0|1:100:39      0|0:89:29       0|0:100:99
+13     36853846        .       G       A       .       PASS    AA=G;DP=143     GT:GQ:DP        0|1:100:39      0|0:92:29       0|0:100:68
+10     120664585       rs59492950      A       C       .       PASS    AA=A;DP=143     GT:GQ:DP        0|1:100:39      0|0:92:29       0|0:100:78
+11     118007573       rs7943460       G       A       .       PASS    AA=G;DP=174     GT:GQ:DP        0|1:100:39      0|0:95:30       0|0:100:49
+12     121529133       rs6489014       A       G       .       PASS    AA=G;DP=141     GT:GQ:DP        0|1:100:39      0|0:95:30       0|0:100:70
+12     120053288       .       C       T       .       PASS    AA=T;DP=134     GT:GQ:DP        0|1:100:39      0|0:98:31       0|0:100:65
+20     59569746        rs4925254       G       C       .       PASS    AA=G;DP=119     GT:GQ:DP        0|1:100:39      0|1:100:13      0|0:100:55
+8      27357077        rs10113756      A       G       .       PASS    AA=G;DP=168     GT:GQ:DP        0|1:100:39      0|1:100:21      0|0:100:61
+2      38615795        rs6544167       C       T       .       PASS    AA=C;DP=126     GT:GQ:DP        0|1:100:39      0|1:100:22      0|0:100:65
+8      86204586        .       T       C       .       PASS    AA=.;DP=110     GT:GQ:DP        0|1:100:39      0|1:100:23      0|0:100:35
+20     1576396 rs12625449      C       T       .       PASS    AA=C;DP=170     GT:GQ:DP        0|1:100:39      0|1:100:25      0|0:100:63
+10     62244711        rs7078769       G       A       .       PASS    AA=G;DP=164     GT:GQ:DP        0|1:100:39      0|1:100:26      0|0:100:54
+5      135272395       rs6895227       G       C       .       PASS    AA=G;DP=161     GT:GQ:DP        0|1:100:39      0|1:100:27      0|0:100:48
+17     68522257        rs7221308       T       C       .       PASS    AA=T;DP=124     GT:GQ:DP        0|1:100:39      0|1:100:28      0|0:100:57
+19     14846652        .       G       T       .       PASS    AA=G;DP=158     GT:GQ:DP        0|1:100:39      0|1:100:28      0|0:100:86
+8      62907202        rs1157914       T       G       .       PASS    AA=G;DP=137     GT:GQ:DP        0|1:100:39      0|1:100:32      0|0:100:64
+9      115786937       rs814701        G       A       .       PASS    AA=A;DP=168     GT:GQ:DP        0|1:100:39      0|1:100:33      0|0:100:49
+11     59237592        rs537595        C       T       .       PASS    AA=T;DP=145     GT:GQ:DP        0|1:100:39      0|1:100:36      0|0:100:70
+21     39410897        rs2836891       C       T       .       PASS    AA=T;DP=129     GT:GQ:DP        0|1:100:39      0|1:37:12       0|0:100:77
+6      7760518 rs267802        C       A       .       PASS    AA=A;DP=113     GT:GQ:DP        0|1:100:39      0|1:46:13       0|0:100:62
+9      36497639        rs329366        C       T       .       PASS    AA=C;DP=132     GT:GQ:DP        0|1:100:39      0|1:51:18       0|0:100:78
+1      246144971       rs4925769       A       G       .       PASS    AA=G;DP=156;HM2 GT:GQ:DP        0|1:100:39      0|1:64:30       0|0:100:89
+11     81573371        rs648623        T       C       .       PASS    AA=C;DP=120     GT:GQ:DP        0|1:100:39      0|1:76:16       0|0:100:65
+18     1666816 rs16941871      C       T       .       PASS    AA=T;DP=146     GT:GQ:DP        0|1:100:39      0|1:77:17       0|0:100:52
+7      7332656 rs1294611       T       C       .       PASS    AA=C;DP=169     GT:GQ:DP        0|1:100:39      0|1:81:40       0|0:100:89
+8      144577342       rs13267722      C       T       .       PASS    AA=T;DP=124     GT:GQ:DP        0|1:100:39      0|1:87:19       0|0:100:65
+21     27659930        rs1452096       T       G       .       PASS    AA=G;DP=144     GT:GQ:DP        0|1:100:39      0|1:92:21       0|0:100:81
+18     73178966        rs1540050       T       G       .       PASS    AA=G;DP=155     GT:GQ:DP        0|1:100:39      0|1:92:24       0|0:100:52
+16     73537148        rs8045295       G       T       .       PASS    AA=t;DP=140     GT:GQ:DP        0|1:100:39      0|1:95:21       0|0:100:38
+1      221787939       rs35916490      A       G       .       PASS    AA=a;DP=128     GT:GQ:DP        0|1:100:39      1|1:16:17       0|1:100:73
+3      177682150       rs10936894      C       T       .       PASS    AA=T;DP=136     GT:GQ:DP        0|1:100:39      1|1:21:19       0|1:100:38
+17     60626918        rs4791218       T       C       .       PASS    AA=C;DP=138     GT:GQ:DP        0|1:100:39      1|1:21:19       0|1:100:81
+2      231930175       .       A       C       .       PASS    AA=A;DP=109     GT:GQ:DP        0|1:100:39      1|1:24:20       0|1:100:42
+2      191944462       rs7609247       A       T       .       PASS    AA=T;DP=122     GT:GQ:DP        0|1:100:39      1|1:26:19       0|1:100:63
+20     25331979        rs4815420       C       T       .       PASS    AA=C;DP=112     GT:GQ:DP        0|1:100:39      1|1:30:11       0|1:100:65
+2      164913506       rs2196802       C       T       .       PASS    AA=T;DP=119     GT:GQ:DP        0|1:100:39      1|1:45:16       0|1:100:65
+17     40828104        rs1059504       A       G       .       PASS    AA=G;DP=141     GT:GQ:DP        0|1:100:39      1|1:45:16       0|1:100:89
+17     37324673        rs12951230      A       G       .       PASS    AA=A;DP=132     GT:GQ:DP        0|1:100:39      1|1:45:24       0|1:100:70
+1      235193288       rs3955487       A       G       .       PASS    AA=A;DP=140;HM2;HM3     GT:GQ:DP        0|1:100:39      1|1:48:17       0|1:100:82
+15     65890260        rs6494696       G       C       .       PASS    AA=C;DP=150     GT:GQ:DP        0|1:100:39      1|1:48:21       0|1:100:91
+20     36373360        rs4811691       G       C       .       PASS    AA=C;DP=120     GT:GQ:DP        0|1:100:39      1|1:51:21       0|1:100:62
+8      109473219       rs2187485       C       A       .       PASS    AA=C;DP=123     GT:GQ:DP        0|1:100:39      1|1:54:19       0|1:100:66
+2      18357213        .       C       G       .       PASS    AA=C;DP=136     GT:GQ:DP        0|1:100:39      1|1:56:27       0|1:100:71
+2      222005514       rs62178655      G       A       .       PASS    AA=A;DP=132     GT:GQ:DP        0|1:100:39      1|1:57:20       0|1:100:75
+20     33022912        rs17092195      T       C       .       PASS    AA=C;DP=129     GT:GQ:DP        0|1:100:39      1|1:60:21       0|1:100:71
+2      10107286        rs6432053       C       T       .       PASS    AA=C;DP=138     GT:GQ:DP        0|1:100:39      1|1:60:21       0|1:100:76
+14     72520658        rs2806025       T       C       .       PASS    AA=t;DP=130     GT:GQ:DP        0|1:100:39      1|1:60:22       0|1:100:69
+12     125606615       rs10773297      T       C       .       PASS    AA=C;DP=137     GT:GQ:DP        0|1:100:39      1|1:60:22       0|1:100:76
+4      157601411       rs4691343       A       C       .       PASS    AA=C;DP=103     GT:GQ:DP        0|1:100:39      1|1:63:23       0|1:100:38
+6      32433813        rs2894249       C       T       .       PASS    AA=T;DP=131     GT:GQ:DP        0|1:100:39      1|1:63:24       0|1:100:32
+8      13827098        rs2127807       C       T       .       PASS    AA=C;DP=146     GT:GQ:DP        0|1:100:39      1|1:66:24       0|1:100:85
+4      147399977       rs2356940       A       G       .       PASS    AA=G;DP=156     GT:GQ:DP        0|1:100:39      1|1:69:25       0|1:100:92
+3      57959593        rs9881809       G       A       .       PASS    AA=G;DP=140     GT:GQ:DP        0|1:100:39      1|1:75:26       0|1:100:76
+1      167365685       rs1200157       G       A       .       PASS    AA=A;DP=139     GT:GQ:DP        0|1:100:39      1|1:76:33       0|1:100:66
+14     98271439        rs10148385      C       T       .       PASS    AA=C;DP=154     GT:GQ:DP        0|1:100:40      0|0:100:34      0|0:100:39
+10     29405584        rs10740796      A       G       .       PASS    AA=G;DP=167     GT:GQ:DP        0|1:100:40      0|0:100:34      0|0:100:47
+15     79360711        rs28441111      G       T       .       PASS    AA=G;DP=133     GT:GQ:DP        0|1:100:40      0|0:11:10       0|0:100:84
+19     365284  rs7408201       T       C       .       PASS    AA=T;DP=108     GT:GQ:DP        0|1:100:40      0|0:23:7        0|0:100:63
+19     45518562        .       A       C       .       PASS    AA=A;DP=131     GT:GQ:DP        0|1:100:40      0|0:25:16       0|0:100:77
+1      20514858        rs12144694      G       C       .       PASS    AA=G;DP=149     GT:GQ:DP        0|1:100:40      0|0:38:22       0|0:100:88
+7      133753811       rs9656437       G       A       .       PASS    AA=G;DP=123     GT:GQ:DP        0|1:100:40      0|0:43:19       0|0:100:67
+19     44917623        rs10402365      C       T       .       PASS    AA=c;DP=140     GT:GQ:DP        0|1:100:40      0|0:44:14       0|0:100:86
+10     48110507        rs11204236      C       T       .       PASS    AA=C;DP=151     GT:GQ:DP        0|1:100:40      0|0:47:20       0|0:100:51
+18     13618979        rs1284426       G       A       .       PASS    AA=A;DP=121     GT:GQ:DP        0|1:100:40      0|0:4:16        0|0:100:64
+5      155920806       rs1036180       C       T       .       PASS    AA=C;DP=121     GT:GQ:DP        0|1:100:40      0|0:50:15       0|0:100:70
+5      101226203       rs11954388      A       C       .       PASS    AA=A;DP=108     GT:GQ:DP        0|1:100:40      0|0:53:16       0|0:100:52
+20     38839126        .       C       T       .       PASS    AA=C;DP=150     GT:GQ:DP        0|1:100:40      0|0:53:17       0|0:100:89
+6      31739900        rs35265780      G       A       .       PASS    AA=G;DP=133     GT:GQ:DP        0|1:100:40      0|0:56:17       0|0:100:75
+3      160336324       .       C       T       .       PASS    AA=C;DP=138     GT:GQ:DP        0|1:100:40      0|0:56:17       0|0:100:80
+10     91690339        rs1343367       G       A       .       PASS    AA=G;DP=140     GT:GQ:DP        0|1:100:40      0|0:56:25       0|0:100:78
+12     63686870        rs12320162      G       T       .       PASS    AA=G;DP=160     GT:GQ:DP        0|1:100:40      0|0:56:32       0|0:100:83
+2      30459455        rs6709177       A       G       .       PASS    AA=A;DP=119     GT:GQ:DP        0|1:100:40      0|0:59:20       0|0:100:60
+3      129646284       rs7614323       T       C       .       PASS    AA=T;DP=123     GT:GQ:DP        0|1:100:40      0|0:59:20       0|0:100:64
+15     68461825        rs4261484       T       C       .       PASS    AA=T;DP=135     GT:GQ:DP        0|1:100:40      0|0:59:20       0|0:100:75
+14     19581104        rs1959643       G       A       .       PASS    AA=A;DP=126     GT:GQ:DP        0|1:100:40      0|0:62:19       0|0:100:68
+16     66374406        rs13330383      C       G       .       PASS    AA=c;DP=143     GT:GQ:DP        0|1:100:40      0|0:62:20       0|0:100:85
+1      68012554        rs3766276       A       C       .       PASS    AA=C;DP=165;HM2;HM3     GT:GQ:DP        0|1:100:40      0|0:62:27       0|0:100:96
+6      148903409       rs6909677       G       A       .       PASS    AA=G;DP=148     GT:GQ:DP        0|1:100:40      0|0:63:25       0|0:100:85
+17     64411295        .       C       G       .       PASS    AA=C;DP=170     GT:GQ:DP        0|1:100:40      0|0:63:31       0|0:100:48
+3      192032445       .       C       A       .       PASS    AA=C;DP=171     GT:GQ:DP        0|1:100:40      0|0:64:32       0|0:100:56
+18     31510891        .       T       A       .       PASS    AA=T;DP=137     GT:GQ:DP        0|1:100:40      0|0:65:20       0|0:100:78
+2      113555757       rs4848314       G       A       .       PASS    AA=G;DP=173     GT:GQ:DP        0|1:100:40      0|0:65:21       0|0:100:62
+14     19741053        rs10130542      T       A       .       PASS    AA=T;DP=141     GT:GQ:DP        0|1:100:40      0|0:68:21       0|0:100:38
+4      25637444        rs6841055       G       A       .       PASS    AA=G;DP=162     GT:GQ:DP        0|1:100:40      0|0:68:27       0|0:100:48
+5      13299670        rs11133731      C       T       .       PASS    AA=T;DP=152     GT:GQ:DP        0|1:100:40      0|0:71:22       0|0:100:46
+8      11399686        rs12155745      G       T       .       PASS    AA=T;DP=141     GT:GQ:DP        0|1:100:40      0|0:71:22       0|0:100:76
+22     40099029        rs11090046      T       C       .       PASS    AA=C;DP=141     GT:GQ:DP        0|1:100:40      0|0:71:22       0|0:100:79
+15     67410894        rs7182765       G       C       .       PASS    AA=G;DP=164     GT:GQ:DP        0|1:100:40      0|0:71:23       0|0:100:63
+4      187309885       rs2276915       G       C       .       PASS    AA=G;DP=135     GT:GQ:DP        0|1:100:40      0|0:71:25       0|0:100:73
+7      70706886        rs35752933      G       A       .       PASS    AA=G;DP=154     GT:GQ:DP        0|1:100:40      0|0:71:27       0|0:100:89
+12     119878824       rs9669493       C       T       .       PASS    AA=C;DP=134     GT:GQ:DP        0|1:100:40      0|0:73:24       0|0:100:69
+11     10617392        rs7936267       G       A       .       PASS    AA=A;DP=133     GT:GQ:DP        0|1:100:40      0|0:74:23       0|0:100:73
+12     108175381       .       G       A       .       PASS    AA=G;DP=143     GT:GQ:DP        0|1:100:40      0|0:74:23       0|0:100:81
+4      10662752        .       G       A       .       PASS    AA=G;DP=158     GT:GQ:DP        0|1:100:40      0|0:74:23       0|0:100:98
+3      41067551        rs17052630      A       G       .       PASS    AA=A;DP=168     GT:GQ:DP        0|1:100:40      0|0:74:24       0|0:100:56
+11     11345466        rs1487128       C       T       .       PASS    AA=T;DP=154     GT:GQ:DP        0|1:100:40      0|0:75:35       0|0:100:77
+16     87451719        rs28557030      A       C       .       PASS    AA=A;DP=159     GT:GQ:DP        0|1:100:40      0|0:77:24       0|0:100:93
+1      95642831        .       T       G       .       PASS    AA=T;DP=124     GT:GQ:DP        0|1:100:40      0|0:77:25       0|0:100:49
+10     85319346        rs12251849      G       C       .       PASS    AA=G;DP=134     GT:GQ:DP        0|1:100:40      0|0:77:26       0|0:100:52
+16     12326469        .       C       G       .       PASS    AA=C;DP=136     GT:GQ:DP        0|1:100:40      0|0:77:27       0|0:100:67
+19     55207616        rs10407701      T       G       .       PASS    AA=G;DP=159     GT:GQ:DP        0|1:100:40      0|0:80:25       0|0:100:45
+7      96114703        rs10242216      A       G       .       PASS    AA=A;DP=127     GT:GQ:DP        0|1:100:40      0|0:80:25       0|0:100:57
+14     71362469        .       T       C       .       PASS    AA=T;DP=138     GT:GQ:DP        0|1:100:40      0|0:80:26       0|0:100:73
+4      83815769        rs10030631      T       C       .       PASS    AA=T;DP=143     GT:GQ:DP        0|1:100:40      0|0:81:31       0|0:100:75
+13     18740146        .       A       G       .       PASS    AA=A;DP=144     GT:GQ:DP        0|1:100:40      0|0:83:27       0|0:100:77
+5      132608889       rs7736339       T       G       .       PASS    AA=T;DP=145     GT:GQ:DP        0|1:100:40      0|0:86:27       0|0:100:79
+10     23435794        .       G       A       .       PASS    AA=A;DP=156     GT:GQ:DP        0|1:100:40      0|0:86:27       0|0:100:92
+1      165793840       rs1737481       A       G       .       PASS    AA=A;DP=156;HM2;HM3     GT:GQ:DP        0|1:100:40      0|0:89:28       0|0:100:45
+2      175015721       rs10930670      C       T       .       PASS    AA=T;DP=135     GT:GQ:DP        0|1:100:40      0|0:89:28       0|0:100:68
+2      235657504       .       C       G       .       PASS    AA=C;DP=140     GT:GQ:DP        0|1:100:40      0|0:89:28       0|0:100:70
+1      91079412        rs34668418      G       A       .       PASS    AA=G;DP=145     GT:GQ:DP        0|1:100:40      0|0:89:29       0|0:100:78
+9      12713530        rs7876041       G       A       .       PASS    AA=A;DP=157     GT:GQ:DP        0|1:100:40      0|0:89:32       0|0:100:44
+2      17955952        rs13396005      C       T       .       PASS    AA=A;DP=146     GT:GQ:DP        0|1:100:40      0|0:92:30       0|0:100:77
+3      196019477       .       C       T       .       PASS    AA=C;DP=166     GT:GQ:DP        0|1:100:40      0|0:92:32       0|0:100:94
+17     17346302        rs55874034      G       A       .       PASS    AA=A;DP=142     GT:GQ:DP        0|1:100:40      0|0:98:32       0|0:100:74
+7      42186259        rs34123493      G       A       .       PASS    AA=G;DP=125     GT:GQ:DP        0|1:100:40      0|1:100:12      0|0:100:74
+14     21584229        rs10130648      A       C       .       PASS    AA=C;DP=155     GT:GQ:DP        0|1:100:40      0|1:100:19      0|0:100:51
+2      56601064        rs989730        A       T       .       PASS    AA=t;DP=181     GT:GQ:DP        0|1:100:40      0|1:100:24      0|0:100:61
+5      39862676        .       G       A       .       PASS    AA=G;DP=142     GT:GQ:DP        0|1:100:40      0|1:100:24      0|0:100:74
+10     112506269       rs17762750      T       A       .       PASS    AA=T;DP=140     GT:GQ:DP        0|1:100:40      0|1:100:27      0|0:100:73
+6      164449371       rs3752534       G       A       .       PASS    AA=A;DP=161     GT:GQ:DP        0|1:100:40      0|1:100:28      0|0:100:49
+1      165433447       rs6671175       G       A       .       PASS    AA=G;DP=167     GT:GQ:DP        0|1:100:40      0|1:100:31      0|0:100:56
+15     79725170        .       G       A       .       PASS    AA=G;DP=146     GT:GQ:DP        0|1:100:40      0|1:65:18       0|0:100:90
+11     133970430       rs4937919       T       C       .       PASS    AA=N;DP=160     GT:GQ:DP        0|1:100:40      0|1:76:26       0|0:100:97
+15     61075174        rs4775590       A       C       .       PASS    AA=a;DP=141     GT:GQ:DP        0|1:100:40      0|1:87:16       0|0:100:38
+15     60401388        rs608844        C       G       .       PASS    AA=C;DP=128     GT:GQ:DP        0|1:100:40      1|1:19:22       0|1:100:70
+2      96485847        rs28795241      G       C       .       PASS    AA=G;DP=129     GT:GQ:DP        0|1:100:40      1|1:31:18       0|1:100:73
+14     21668559        .       C       T       .       PASS    AA=c;DP=132     GT:GQ:DP        0|1:100:40      1|1:41:22       0|1:100:74
+21     32831859        rs2833866       C       A       .       PASS    AA=A;DP=106     GT:GQ:DP        0|1:100:40      1|1:45:16       0|1:100:55
+22     25040661        rs6005010       C       A       .       PASS    AA=C;DP=129     GT:GQ:DP        0|1:100:40      1|1:45:24       0|1:100:64
+11     18693453        rs4993024       A       G       .       PASS    AA=a;DP=135     GT:GQ:DP        0|1:100:40      1|1:48:17       0|1:100:81
+2      240117104       rs7568886       G       A       .       PASS    AA=G;DP=164     GT:GQ:DP        0|1:100:40      1|1:57:20       0|1:100:54
+4      109150060       rs6810610       A       G       .       PASS    AA=a;DP=133     GT:GQ:DP        0|1:100:40      1|1:57:20       0|1:100:76
+12     4031958 rs2724243       G       A       .       PASS    AA=A;DP=125     GT:GQ:DP        0|1:100:40      1|1:60:21       0|1:100:65
+17     23814995        rs57932087      A       G       .       PASS    AA=.;DP=152     GT:GQ:DP        0|1:100:40      1|1:60:24       0|1:100:88
+10     122290963       rs1571097       C       A       .       PASS    AA=C;DP=168     GT:GQ:DP        0|1:100:40      1|1:61:33       0|1:100:41
+1      31932175        rs2275097       A       C       .       PASS    AA=C;DP=159     GT:GQ:DP        0|1:100:40      1|1:61:33       0|1:100:84
+5      87359073        rs10053814      A       G       .       PASS    AA=G;DP=141     GT:GQ:DP        0|1:100:40      1|1:63:23       0|1:100:78
+14     95107563        rs12436189      T       A       .       PASS    AA=T;DP=139     GT:GQ:DP        0|1:100:40      1|1:66:23       0|1:100:74
+5      105942662       rs35138549      A       G       .       PASS    AA=A;DP=141     GT:GQ:DP        0|1:100:40      1|1:66:23       0|1:100:78
+8      3061851 rs13262871      A       G       .       PASS    AA=G;DP=153     GT:GQ:DP        0|1:100:40      1|1:66:29       0|1:100:86
+12     106197332       rs2374688       T       G       .       PASS    AA=G;DP=137     GT:GQ:DP        0|1:100:40      1|1:69:24       0|1:100:72
+3      163790313       rs7426960       A       G       .       PASS    AA=G;DP=136     GT:GQ:DP        0|1:100:40      1|1:72:26       0|1:100:58
+18     8889357 rs12456822      A       G       .       PASS    AA=G;DP=151     GT:GQ:DP        0|1:100:40      1|1:79:34       0|1:100:79
+2      223307247       rs2894472       T       G       .       PASS    AA=G;DP=140     GT:GQ:DP        0|1:100:40      1|1:81:28       0|1:100:72
+12     34611303        .       C       G       .       PASS    AA=.;DP=146     GT:GQ:DP        0|1:100:41      0|0:100:32      0|0:100:73
+12     103510884       rs7979531       C       G       .       PASS    AA=G;DP=176     GT:GQ:DP        0|1:100:41      0|0:100:32      0|0:100:87
+9      79256501        .       G       A       .       PASS    AA=G;DP=149     GT:GQ:DP        0|1:100:41      0|0:100:33      0|0:100:73
+3      158972987       rs7613139       C       T       .       PASS    AA=C;DP=166     GT:GQ:DP        0|1:100:41      0|0:100:33      0|0:100:89
+1      171814486       .       G       A       .       PASS    AA=G;DP=162     GT:GQ:DP        0|1:100:41      0|0:100:36      0|0:100:85
+22     42614889        rs5764380       A       G       .       PASS    AA=G;DP=130     GT:GQ:DP        0|1:100:41      0|0:21:16       0|0:100:73
+20     34911556        rs11697412      C       A       .       PASS    AA=C;DP=154     GT:GQ:DP        0|1:100:41      0|0:40:16       0|0:100:52
+20     49232028        rs8124501       G       A       .       PASS    AA=G;DP=140     GT:GQ:DP        0|1:100:41      0|0:41:16       0|0:100:46
+5      56855960        rs4700199       A       G       .       PASS    AA=A;DP=141     GT:GQ:DP        0|1:100:41      0|0:46:25       0|0:100:76
+17     76526397        .       A       G       .       PASS    AA=A;DP=102     GT:GQ:DP        0|1:100:41      0|0:47:14       0|0:100:46
+7      42395003        rs7800269       A       T       .       PASS    AA=A;DP=138     GT:GQ:DP        0|1:100:41      0|0:49:26       0|0:100:72
+22     29722366        .       A       G       .       PASS    AA=A;DP=114     GT:GQ:DP        0|1:100:41      0|0:53:16       0|0:100:58
+20     45434367        rs941528        C       T       .       PASS    AA=C;DP=149     GT:GQ:DP        0|1:100:41      0|0:53:17       0|0:100:94
+22     18129458        .       C       T       .       PASS    AA=C;DP=159     GT:GQ:DP        0|1:100:41      0|0:53:18       0|0:100:42
+15     86817307        .       A       G       .       PASS    AA=A;DP=152     GT:GQ:DP        0|1:100:41      0|0:56:19       0|0:100:94
+3      3722790 rs2010019       T       C       .       PASS    AA=T;DP=140     GT:GQ:DP        0|1:100:41      0|0:56:23       0|0:100:76
+1      30706571        rs262623        C       T       .       PASS    AA=C;DP=152;HM2;HM3     GT:GQ:DP        0|1:100:41      0|0:59:18       0|0:100:86
+6      132192739       rs7771242       A       G       .       PASS    AA=A;DP=138     GT:GQ:DP        0|1:100:41      0|0:59:20       0|0:100:81
+22     22841629        .       C       G       .       PASS    AA=C;DP=152     GT:GQ:DP        0|1:100:41      0|0:62:19       0|0:100:97
+16     31136961        rs9933960       G       C       .       PASS    AA=G;DP=134     GT:GQ:DP        0|1:100:41      0|0:62:20       0|0:100:75
+8      29304571        .       C       T       .       PASS    AA=C;DP=147     GT:GQ:DP        0|1:100:41      0|0:62:20       0|0:100:88
+11     44753419        rs751705        G       A       .       PASS    AA=G;DP=163     GT:GQ:DP        0|1:100:41      0|0:62:22       0|0:100:48
+1      70610093        rs56983797      T       A       .       PASS    AA=-;DP=136     GT:GQ:DP        0|1:100:41      0|0:62:26       0|0:100:68
+3      19243325        rs17005761      T       C       .       PASS    AA=T;DP=133     GT:GQ:DP        0|1:100:41      0|0:65:20       0|0:100:71
+3      184739750       rs6795537       C       T       .       PASS    AA=-;DP=144     GT:GQ:DP        0|1:100:41      0|0:65:20       0|0:100:86
+20     29361966        rs6089202       G       C       .       PASS    AA=G;DP=141     GT:GQ:DP        0|1:100:41      0|0:65:22       0|0:100:78
+13     51155092        .       A       C       .       PASS    AA=A;DP=168     GT:GQ:DP        0|1:100:41      0|0:66:26       0|0:100:57
+19     16596821        .       C       G       .       PASS    AA=C;DP=167     GT:GQ:DP        0|1:100:41      0|0:66:32       0|0:100:97
+11     131042158       .       C       A       .       PASS    AA=C;DP=129     GT:GQ:DP        0|1:100:41      0|0:68:21       0|0:100:68
+8      22744395        .       A       C       .       PASS    AA=A;DP=132     GT:GQ:DP        0|1:100:41      0|0:68:21       0|0:100:70
+1      54742194        rs7552961       G       T       .       PASS    AA=g;DP=133     GT:GQ:DP        0|1:100:41      0|0:68:21       0|0:100:71
+5      143699575       .       G       A       .       PASS    AA=g;DP=127     GT:GQ:DP        0|1:100:41      0|0:68:22       0|0:100:64
+15     54022478        .       C       A       .       PASS    AA=C;DP=165     GT:GQ:DP        0|1:100:41      0|0:70:28       0|0:100:97
+1      84258958        .       C       T       .       PASS    AA=c;DP=121     GT:GQ:DP        0|1:100:41      0|0:71:23       0|0:100:55
+11     93356828        rs2939619       C       T       .       PASS    AA=C;DP=173     GT:GQ:DP        0|1:100:41      0|0:71:24       0|0:100:53
+17     30637790        rs16970816      G       A       .       PASS    AA=G;DP=146     GT:GQ:DP        0|1:100:41      0|0:74:25       0|0:100:82
+3      99713179        rs2316131       T       C       .       PASS    AA=T;DP=144     GT:GQ:DP        0|1:100:41      0|0:77:24       0|0:100:77
+14     49904009        rs4901022       C       T       .       PASS    AA=C;DP=183     GT:GQ:DP        0|1:100:41      0|0:77:25       0|0:100:48
+4      17782576        rs57150735      G       C       .       PASS    AA=G;DP=157     GT:GQ:DP        0|1:100:41      0|0:77:25       0|0:100:49
+11     20317071        .       A       G       .       PASS    AA=A;DP=187     GT:GQ:DP        0|1:100:41      0|0:79:39       0|0:100:55
+8      131552193       rs10738136      T       C       .       PASS    AA=T;DP=156     GT:GQ:DP        0|1:100:41      0|0:80:25       0|0:100:76
+4      40889473        rs57307432      G       A       .       PASS    AA=G;DP=142     GT:GQ:DP        0|1:100:41      0|0:80:25       0|0:100:79
+10     87155581        rs61868115      G       A       .       PASS    AA=g;DP=146     GT:GQ:DP        0|1:100:41      0|0:80:26       0|0:100:81
+3      72918704        .       A       G       .       PASS    AA=a;DP=173     GT:GQ:DP        0|1:100:41      0|0:83:27       0|0:100:60
+9      36158293        .       T       A       .       PASS    AA=T;DP=158     GT:GQ:DP        0|1:100:41      0|0:86:27       0|0:100:47
+12     51991273        .       G       A       .       PASS    AA=G;DP=129     GT:GQ:DP        0|1:100:41      0|0:86:27       0|0:100:61
+18     41812161        rs1370827       A       G       .       PASS    AA=A;DP=155     GT:GQ:DP        0|1:100:41      0|0:89:28       0|0:100:86
+11     93546186        rs11020672      A       C       .       PASS    AA=A;DP=158     GT:GQ:DP        0|1:100:41      0|0:89:28       0|0:100:90
+17     78079721        .       A       G       .       PASS    AA=A;DP=140     GT:GQ:DP        0|1:100:41      0|0:92:29       0|0:100:71
+12     107104505       rs58210521      G       A       .       PASS    AA=G;DP=164     GT:GQ:DP        0|1:100:41      0|0:92:29       0|0:100:95
+21     16664499        .       A       G       .       PASS    AA=A;DP=150     GT:GQ:DP        0|1:100:41      0|0:92:30       0|0:100:77
+2      234679637       rs57171395      T       C       .       PASS    AA=T;DP=170     GT:GQ:DP        0|1:100:41      0|0:95:30       0|0:100:54
+2      181893808       .       G       A       .       PASS    AA=G;DP=176     GT:GQ:DP        0|1:100:41      0|0:95:30       0|0:100:62
+17     66178578        rs17792069      T       C       .       PASS    AA=T;DP=149     GT:GQ:DP        0|1:100:41      0|0:98:31       0|0:100:81
+1      44764483        rs12069261      G       A       .       PASS    AA=G;DP=140;HM2;HM3     GT:GQ:DP        0|1:100:41      0|0:99:35       0|0:100:66
+5      13748212        rs13358387      T       C       .       PASS    AA=T;DP=147     GT:GQ:DP        0|1:100:41      0|1:100:18      0|0:100:45
+8      96290298        rs734666        T       C       .       PASS    AA=t;DP=153     GT:GQ:DP        0|1:100:41      0|1:100:18      0|0:100:52
+5      42955736        rs2548368       C       T       .       PASS    AA=C;DP=139     GT:GQ:DP        0|1:100:41      0|1:100:24      0|0:100:75
+2      25891041        rs35430508      G       A       .       PASS    AA=G;DP=162     GT:GQ:DP        0|1:100:41      0|1:100:25      0|0:100:76
+3      192109926       rs866986        C       T       .       PASS    AA=c;DP=142     GT:GQ:DP        0|1:100:41      0|1:100:27      0|0:100:74
+2      27275104        .       C       T       .       PASS    AA=C;DP=183     GT:GQ:DP        0|1:100:41      0|1:100:29      0|0:100:74
+14     60848668        rs872147        A       G       .       PASS    AA=A;DP=141     GT:GQ:DP        0|1:100:41      0|1:31:21       0|0:100:79
+4      6089048 rs4330301       T       A       .       PASS    AA=T;DP=129     GT:GQ:DP        0|1:100:41      0|1:42:13       0|0:100:79
+19     6497785 rs10407602      G       C       .       PASS    AA=G;DP=154     GT:GQ:DP        0|1:100:41      0|1:45:17       0|0:100:53
+12     127900767       rs11059973      C       T       .       PASS    AA=C;DP=124     GT:GQ:DP        0|1:100:41      0|1:54:15       0|0:100:68
+5      101684754       rs1597768       G       C       .       PASS    AA=G;DP=143     GT:GQ:DP        0|1:100:41      0|1:84:21       0|0:100:83
+17     63904460        rs57197811      T       C       .       PASS    AA=T;DP=150     GT:GQ:DP        0|1:100:41      0|1:92:15       0|0:100:94
+2      54260474        rs13399915      T       C       .       PASS    AA=T;DP=143     GT:GQ:DP        0|1:100:41      1|1:10:18       0|1:100:71
+19     6856105 rs4807110       G       C       .       PASS    AA=G;DP=137     GT:GQ:DP        0|1:100:41      1|1:32:20       0|1:100:76
+15     64740659        rs2469109       G       T       .       PASS    AA=T;DP=143     GT:GQ:DP        0|1:100:41      1|1:36:22       0|1:100:79
+2      153149582       rs3811572       T       C       .       PASS    AA=T;DP=117     GT:GQ:DP        0|1:100:41      1|1:50:24       0|1:100:52
+1      7509245 rs1725225       G       T       .       PASS    AA=T;DP=155     GT:GQ:DP        0|1:100:41      1|1:51:19       0|1:100:52
+1      6133557 rs12564469      G       A       .       PASS    AA=g;DP=122     GT:GQ:DP        0|1:100:41      1|1:54:19       0|1:100:50
+10     73415829        rs11000124      T       A       .       PASS    AA=A;DP=143     GT:GQ:DP        0|1:100:41      1|1:55:31       0|1:100:71
+1      227912422       rs1931324       T       C       .       PASS    AA=C;DP=141;HM2;HM3     GT:GQ:DP        0|1:100:41      1|1:60:21       0|1:100:65
+7      26094907        rs6945001       A       G       .       PASS    AA=G;DP=168     GT:GQ:DP        0|1:100:41      1|1:60:25       0|1:100:57
+4      7843898 rs11944501      G       C       .       PASS    AA=G;DP=147     GT:GQ:DP        0|1:100:41      1|1:66:23       0|1:100:44
+12     61800541        .       G       T       .       PASS    AA=g;DP=144     GT:GQ:DP        0|1:100:41      1|1:66:24       0|1:100:64
+12     3905782 rs653766        G       A       .       PASS    AA=A;DP=161     GT:GQ:DP        0|1:100:41      1|1:69:25       0|1:100:93
+3      138183145       rs75976 G       A       .       PASS    AA=G;DP=173     GT:GQ:DP        0|1:100:42      0|0:100:32      0|0:100:43
+18     68871803        rs2194631       C       T       .       PASS    AA=T;DP=153     GT:GQ:DP        0|1:100:42      0|0:100:32      0|0:100:82
+12     25524018        rs1960721       A       G       .       PASS    AA=G;DP=156     GT:GQ:DP        0|1:100:42      0|0:100:33      0|0:100:83
+3      197186648       .       T       A       .       PASS    AA=.;DP=177     GT:GQ:DP        0|1:100:42      0|0:100:34      0|0:100:55
+14     67975727        rs11158743      C       T       .       PASS    AA=C;DP=160     GT:GQ:DP        0|1:100:42      0|0:100:34      0|0:100:86
+7      77496836        rs3779349       G       C       .       PASS    AA=C;DP=139     GT:GQ:DP        0|1:100:42      0|0:18:15       0|0:100:82
+11     70795292        rs1557465       A       G       .       PASS    AA=A;DP=184     GT:GQ:DP        0|1:100:42      0|0:40:25       0|0:100:73
+6      9455583 rs11758572      G       T       .       PASS    AA=G;DP=162     GT:GQ:DP        0|1:100:42      0|0:43:24       0|0:100:50
+5      142973756       .       G       T       .       PASS    AA=G;DP=136     GT:GQ:DP        0|1:100:42      0|0:49:26       0|0:100:70
+6      37288215        rs1224329       G       A       .       PASS    AA=G;DP=175     GT:GQ:DP        0|1:100:42      0|0:50:16       0|0:100:65
+9      100641992       rs2277189       C       G       .       PASS    AA=C;DP=143     GT:GQ:DP        0|1:100:42      0|0:50:16       0|0:100:86
+14     73471653        .       G       T       .       PASS    AA=T;DP=129     GT:GQ:DP        0|1:100:42      0|0:53:16       0|0:100:70
+15     99466142        .       T       A       .       PASS    AA=T;DP=119     GT:GQ:DP        0|1:100:42      0|0:56:17       0|0:100:59
+5      67771260        .       C       T       .       PASS    AA=C;DP=153     GT:GQ:DP        0|1:100:42      0|0:62:19       0|0:100:40
+9      16149016        .       C       T       .       PASS    AA=c;DP=133     GT:GQ:DP        0|1:100:42      0|0:62:19       0|0:100:75
+4      160512993       rs1881754       C       A       .       PASS    AA=C;DP=138     GT:GQ:DP        0|1:100:42      0|0:62:19       0|0:100:79
+2      235787660       rs57376631      G       A       .       PASS    AA=G;DP=147     GT:GQ:DP        0|1:100:42      0|0:62:21       0|0:100:74
+12     27522647        rs415192        A       C       .       PASS    AA=C;DP=155     GT:GQ:DP        0|1:100:42      0|0:63:31       0|0:100:82
+11     25190109        .       C       T       .       PASS    AA=C;DP=147     GT:GQ:DP        0|1:100:42      0|0:64:26       0|0:100:78
+11     70224867        rs11603415      G       A       .       PASS    AA=G;DP=116     GT:GQ:DP        0|1:100:42      0|0:65:20       0|0:100:54
+16     13738019        .       G       C       .       PASS    AA=G;DP=146     GT:GQ:DP        0|1:100:42      0|0:65:21       0|0:100:77
+11     126821072       rs11220919      C       T       .       PASS    AA=C;DP=158     GT:GQ:DP        0|1:100:42      0|0:65:22       0|0:100:50
+3      142099425       rs949943        C       T       .       PASS    AA=C;DP=142     GT:GQ:DP        0|1:100:42      0|0:67:28       0|0:100:73
+13     78447856        rs17070618      C       T       .       PASS    AA=c;DP=153     GT:GQ:DP        0|1:100:42      0|0:68:21       0|0:100:89
+12     23715714        rs16926567      T       C       .       PASS    AA=T;DP=130     GT:GQ:DP        0|1:100:42      0|0:68:22       0|0:100:67
+5      177615079       .       C       T       .       PASS    AA=c;DP=134     GT:GQ:DP        0|1:100:42      0|0:71:22       0|0:100:70
+1      158976867       rs573702        G       A       .       PASS    AA=G;DP=141;HM3 GT:GQ:DP        0|1:100:42      0|0:71:22       0|0:100:81
+7      158215689       .       G       C       .       PASS    AA=g;DP=146     GT:GQ:DP        0|1:100:42      0|0:71:22       0|0:100:82
+9      132416837       rs12346094      G       A       .       PASS    AA=G;DP=128     GT:GQ:DP        0|1:100:42      0|0:74:23       0|0:100:67
+15     43359634        .       C       T       .       PASS    AA=C;DP=144     GT:GQ:DP        0|1:100:42      0|0:74:23       0|0:100:80
+2      42136342        .       C       G       .       PASS    AA=C;DP=184     GT:GQ:DP        0|1:100:42      0|0:76:29       0|0:100:66
+2      44662307        rs17032391      A       G       .       PASS    AA=A;DP=115     GT:GQ:DP        0|1:100:42      0|0:77:24       0|0:100:48
+1      25700598        .       C       T       .       PASS    AA=c;DP=140     GT:GQ:DP        0|1:100:42      0|0:77:24       0|0:100:76
+3      173318583       rs2124546       G       A       .       PASS    AA=A;DP=144     GT:GQ:DP        0|1:100:42      0|0:77:24       0|0:100:79
+20     40090219        rs6102637       T       C       .       PASS    AA=C;DP=145     GT:GQ:DP        0|1:100:42      0|0:80:25       0|0:100:77
+1      212671254       rs17022929      C       T       .       PASS    AA=C;DP=149;HM2 GT:GQ:DP        0|1:100:42      0|0:80:26       0|0:100:84
+3      61145535        rs9870560       C       T       .       PASS    AA=C;DP=151     GT:GQ:DP        0|1:100:42      0|0:80:27       0|0:100:79
+6      11532907        rs4076120       C       T       .       PASS    AA=T;DP=161     GT:GQ:DP        0|1:100:42      0|0:83:26       0|0:100:52
+1      22606440        rs4654799       T       G       .       PASS    AA=G;DP=167     GT:GQ:DP        0|1:100:42      0|0:86:28       0|0:100:50
+2      73681818        rs1320374       T       C       .       PASS    AA=T;DP=147     GT:GQ:DP        0|1:100:42      0|0:86:28       0|0:100:78
+3      78382844        rs9844417       A       T       .       PASS    AA=A;DP=176     GT:GQ:DP        0|1:100:42      0|0:89:28       0|0:100:52
+8      48873508        rs7830743       A       G       .       PASS    AA=A;DP=142     GT:GQ:DP        0|1:100:42      0|0:92:29       0|0:100:71
+3      124581978       .       C       T       .       PASS    AA=C;DP=158     GT:GQ:DP        0|1:100:42      0|0:92:30       0|0:100:47
+5      55877219        rs30335 G       A       .       PASS    AA=A;DP=173     GT:GQ:DP        0|1:100:42      0|0:92:30       0|0:100:57
+3      154093248       rs34245652      G       A       .       PASS    AA=G;DP=178     GT:GQ:DP        0|1:100:42      0|0:92:33       0|0:100:104
+9      133378383       .       C       T       .       PASS    AA=C;DP=130     GT:GQ:DP        0|1:100:42      0|1:100:24      0|0:100:66
+2      111711758       rs12329287      A       T       .       PASS    AA=A;DP=141     GT:GQ:DP        0|1:100:42      0|1:100:25      0|0:100:74
+16     75947263        rs8058333       C       T       .       PASS    AA=T;DP=158     GT:GQ:DP        0|1:100:42      0|1:100:28      0|0:100:45
+18     13343145        rs8085540       T       C       .       PASS    AA=C;DP=129     GT:GQ:DP        0|1:100:42      0|1:100:28      0|0:100:61
+9      93746489        rs10820925      C       A       .       PASS    AA=C;DP=134     GT:GQ:DP        0|1:100:42      0|1:100:31      0|0:100:60
+12     32134313        rs2347210       C       T       .       PASS    AA=T;DP=163     GT:GQ:DP        0|1:100:42      0|1:100:31      0|0:100:88
+7      16853757        rs2177784       G       A       .       PASS    AA=G;DP=165     GT:GQ:DP        0|1:100:42      0|1:100:36      0|0:100:87
+4      77601092        rs4859445       T       C       .       PASS    AA=T;DP=130     GT:GQ:DP        0|1:100:42      0|1:38:24       0|0:100:65
+9      47002226        rs28624725      T       A       .       PASS    AA=-;DP=109     GT:GQ:DP        0|1:100:42      0|1:55:41       0|0:57:21
+19     45348045        rs6508931       T       C       .       PASS    AA=T;DP=164     GT:GQ:DP        0|1:100:42      0|1:64:32       0|0:94:49
+7      30187587        .       G       A       .       PASS    AA=G;DP=139     GT:GQ:DP        0|1:100:42      0|1:66:27       0|0:100:70
+11     128291504       rs4937391       G       A       .       PASS    AA=-;DP=160     GT:GQ:DP        0|1:100:42      0|1:88:23       0|0:100:49
+13     30085734        rs6490471       T       C       .       PASS    AA=C;DP=142     GT:GQ:DP        0|1:100:42      1|1:100:37      0|1:100:61
+20     30982213        rs13041716      C       G       .       PASS    AA=G;DP=120     GT:GQ:DP        0|1:100:42      1|1:16:17       0|1:100:46
+8      121385625       rs10100841      C       T       .       PASS    AA=T;DP=132     GT:GQ:DP        0|1:100:42      1|1:36:13       0|1:100:72
+22     43514983        rs58205594      C       T       .       PASS    AA=C;DP=132     GT:GQ:DP        0|1:100:42      1|1:3:6 0|1:100:85
+1      206008364       rs2488255       C       T       .       PASS    AA=T;DP=145;HM2 GT:GQ:DP        0|1:100:42      1|1:53:25       0|1:100:78
+22     30653511        rs5994451       T       G       .       PASS    AA=G;DP=147     GT:GQ:DP        0|1:100:42      1|1:54:20       0|1:100:41
+7      22482025        rs28452566      G       A       .       PASS    AA=A;DP=160     GT:GQ:DP        0|1:100:42      1|1:54:20       0|1:100:94
+12     93763136        rs7307348       T       A       .       PASS    AA=A;DP=176     GT:GQ:DP        0|1:100:42      1|1:60:21       0|1:100:42
+8      125712963       rs11780949      A       G       .       PASS    AA=G;DP=138     GT:GQ:DP        0|1:100:42      1|1:69:24       0|1:100:73
+20     16485006        rs8119828       A       C       .       PASS    AA=C;DP=155     GT:GQ:DP        0|1:100:42      1|1:78:27       0|1:100:84
+7      25346281        rs12672230      C       T       .       PASS    AA=C;DP=161     GT:GQ:DP        0|1:100:43      0|0:100:35      0|0:100:44
+15     59299798        rs11637553      C       T       .       PASS    AA=T;DP=178     GT:GQ:DP        0|1:100:43      0|0:100:36      0|0:100:47
+4      55671107        rs17085320      T       A       .       PASS    AA=A;DP=169     GT:GQ:DP        0|1:100:43      0|0:100:37      0|0:100:44
+1      87555104        rs12125614      C       A       .       PASS    AA=A;DP=163;HM2 GT:GQ:DP        0|1:100:43      0|0:29:34       0|0:100:87
+5      5796909 rs666878        G       T       .       PASS    AA=N;DP=131     GT:GQ:DP        0|1:100:43      0|0:3:16        0|0:100:68
+14     69065314        .       C       T       .       PASS    AA=C;DP=148     GT:GQ:DP        0|1:100:43      0|0:50:15       0|0:100:46
+19     50262933        .       G       A       .       PASS    AA=G;DP=142     GT:GQ:DP        0|1:100:43      0|0:50:15       0|0:100:82
+17     74172366        .       G       C       .       PASS    AA=G;DP=142     GT:GQ:DP        0|1:100:43      0|0:50:15       0|0:100:83
+16     20538339        rs6497510       A       T       .       PASS    AA=T;DP=146     GT:GQ:DP        0|1:100:43      0|0:56:18       0|0:100:83
+5      14923848        .       C       T       .       PASS    AA=C;DP=132     GT:GQ:DP        0|1:100:43      0|0:59:19       0|0:100:72
+11     3159365 rs7931110       G       C       .       PASS    AA=g;DP=162     GT:GQ:DP        0|1:100:43      0|0:59:29       0|0:100:53
+6      144679025       rs2502634       A       G       .       PASS    AA=A;DP=129     GT:GQ:DP        0|1:100:43      0|0:62:19       0|0:100:69
+1      30867071        rs56047801      A       G       .       PASS    AA=A;DP=134     GT:GQ:DP        0|1:100:43      0|0:62:19       0|0:100:72
+5      125566396       .       G       A       .       PASS    AA=G;DP=130     GT:GQ:DP        0|1:100:43      0|0:65:20       0|0:100:67
+5      178795696       rs10035682      A       G       .       PASS    AA=A;DP=154     GT:GQ:DP        0|1:100:43      0|0:65:21       0|0:100:46
+16     9709670 rs35786714      C       G       .       PASS    AA=C;DP=147     GT:GQ:DP        0|1:100:43      0|0:65:28       0|0:100:70
+2      215057282       rs4578854       C       T       .       PASS    AA=T;DP=136     GT:GQ:DP        0|1:100:43      0|0:68:21       0|0:100:73
+3      5854649 rs1961585       T       C       .       PASS    AA=T;DP=148     GT:GQ:DP        0|1:100:43      0|0:68:21       0|0:100:82
+4      190431329       rs62342929      G       C       .       PASS    AA=G;DP=169     GT:GQ:DP        0|1:100:43      0|0:70:29       0|0:100:97
+14     69270784        .       G       A       .       PASS    AA=G;DP=166     GT:GQ:DP        0|1:100:43      0|0:71:22       0|0:100:102
+3      50225219        rs9847853       C       T       .       PASS    AA=C;DP=142     GT:GQ:DP        0|1:100:43      0|0:71:22       0|0:100:77
+7      30418982        rs61253134      T       C       .       PASS    AA=T;DP=152     GT:GQ:DP        0|1:100:43      0|0:75:31       0|0:100:77
+3      56885131        rs7611431       G       A       .       PASS    AA=G;DP=162     GT:GQ:DP        0|1:100:43      0|0:80:25       0|0:100:51
+2      71231061        rs11898475      C       T       .       PASS    AA=C;DP=183     GT:GQ:DP        0|1:100:43      0|0:80:26       0|0:100:71
+5      168467936       rs60243343      G       T       .       PASS    AA=G;DP=176     GT:GQ:DP        0|1:100:43      0|0:80:29       0|0:100:47
+11     96081480        rs1866534       G       A       .       PASS    AA=G;DP=163     GT:GQ:DP        0|1:100:43      0|0:86:27       0|0:100:42
+18     43164425        .       C       T       .       PASS    AA=C;DP=128     GT:GQ:DP        0|1:100:43      0|0:86:27       0|0:100:48
+12     113068395       .       G       A       .       PASS    AA=G;DP=190     GT:GQ:DP        0|1:100:43      0|0:86:27       0|0:100:66
+15     28785022        .       G       A       .       PASS    AA=G;DP=156     GT:GQ:DP        0|1:100:43      0|0:86:27       0|0:100:88
+1      218034434       rs10779385      A       G       .       PASS    AA=G;DP=145;HM2 GT:GQ:DP        0|1:100:43      0|0:86:28       0|0:100:73
+3      137175251       rs9834104       T       C       .       PASS    AA=T;DP=160     GT:GQ:DP        0|1:100:43      0|0:88:34       0|0:100:83
+6      135299703       rs2235263       T       G       .       PASS    AA=T;DP=159     GT:GQ:DP        0|1:100:43      0|0:89:28       0|0:100:44
+6      125023886       rs6928014       A       C       .       PASS    AA=C;DP=165     GT:GQ:DP        0|1:100:43      0|0:92:29       0|0:100:95
+5      6265193 rs2937791       T       C       .       PASS    AA=T;DP=147     GT:GQ:DP        0|1:100:43      0|1:100:20      0|0:100:82
+4      2962833 rs2471339       T       A       .       PASS    AA=T;DP=158     GT:GQ:DP        0|1:100:43      0|1:100:20      0|0:100:91
+1      207847371       rs760832        T       C       .       PASS    AA=C;DP=170;HM2;HM3     GT:GQ:DP        0|1:100:43      0|1:100:22      0|0:100:100
+2      11005433        rs13025975      A       T       .       PASS    AA=A;DP=136     GT:GQ:DP        0|1:100:43      0|1:100:22      0|0:100:70
+21     14876399        rs2822785       G       A       .       PASS    AA=G;DP=157     GT:GQ:DP        0|1:100:43      0|1:100:23      0|0:100:92
+6      99778347        rs2047357       G       C       .       PASS    AA=C;DP=127     GT:GQ:DP        0|1:100:43      0|1:100:24      0|0:100:61
+6      154623868       .       T       A       .       PASS    AA=T;DP=150     GT:GQ:DP        0|1:100:43      0|1:100:24      0|0:100:87
+11     129890280       rs7944513       A       T       .       PASS    AA=A;DP=145     GT:GQ:DP        0|1:100:43      0|1:100:28      0|0:100:71
+8      10099637        rs28660563      A       G       .       PASS    AA=G;DP=148     GT:GQ:DP        0|1:100:43      0|1:100:30      0|0:100:78
+9      6430619 rs394137        A       G       .       PASS    AA=A;DP=162     GT:GQ:DP        0|1:100:43      0|1:100:32      0|0:100:44
+6      138642529       rs17067340      C       T       .       PASS    AA=C;DP=166     GT:GQ:DP        0|1:100:43      0|1:100:35      0|0:100:86
+4      3081208 rs7691627       G       A       .       PASS    AA=A;DP=168     GT:GQ:DP        0|1:100:43      1|1:51:19       0|1:100:54
+16     12058641        rs350216        A       G       .       PASS    AA=G;DP=153     GT:GQ:DP        0|1:100:43      1|1:65:27       0|1:100:83
+17     28446289        rs3928996       C       T       .       PASS    AA=T;DP=188     GT:GQ:DP        0|1:100:43      1|1:67:29       0|1:100:58
+2      37944426        rs737649        G       T       .       PASS    AA=T;DP=142     GT:GQ:DP        0|1:100:43      1|1:72:26       0|1:100:74
+6      52561944        rs9370135       T       A       .       PASS    AA=A;DP=154     GT:GQ:DP        0|1:100:43      1|1:75:28       0|1:100:83
+10     120282302       rs645662        A       G       .       PASS    AA=G;DP=153     GT:GQ:DP        0|1:100:43      1|1:75:30       0|1:100:84
+3      8450094 rs57627684      A       C       .       PASS    AA=-;DP=165     GT:GQ:DP        0|1:100:44      0|0:100:32      0|0:100:44
+1      158806467       rs7512659       T       C       .       PASS    AA=T;DP=156;HM2 GT:GQ:DP        0|1:100:44      0|0:100:34      0|0:100:80
+9      94293634        .       T       C       .       PASS    AA=T;DP=161     GT:GQ:DP        0|1:100:44      0|0:32:20       0|0:100:101
+19     17514280        .       G       T       .       PASS    AA=g;DP=137     GT:GQ:DP        0|1:100:44      0|0:32:9        0|0:100:80
+1      105967286       rs12724931      T       C       .       PASS    AA=T;DP=144     GT:GQ:DP        0|1:100:44      0|0:37:21       0|0:100:39
+17     47106180        .       G       A       .       PASS    AA=G;DP=134     GT:GQ:DP        0|1:100:44      0|0:59:19       0|0:100:73
+2      237566772       .       G       C       .       PASS    AA=G;DP=160     GT:GQ:DP        0|1:100:44      0|0:62:19       0|0:100:54
+6      169378288       .       T       C       .       PASS    AA=N;DP=124     GT:GQ:DP        0|1:100:44      0|0:62:19       0|0:41:63
+12     933181  .       T       G       .       PASS    AA=T;DP=153     GT:GQ:DP        0|1:100:44      0|0:63:21       0|0:100:92
+16     65014608        rs7185033       T       C       .       PASS    AA=T;DP=136     GT:GQ:DP        0|1:100:44      0|0:65:20       0|0:100:72
+5      179027080       rs4364351       G       C       .       PASS    AA=G;DP=135     GT:GQ:DP        0|1:100:44      0|0:65:20       0|0:100:72
+5      111672938       rs4958036       C       G       .       PASS    AA=G;DP=141     GT:GQ:DP        0|1:100:44      0|0:68:21       0|0:100:79
+18     43086220        rs58880537      G       A       .       PASS    AA=G;DP=154     GT:GQ:DP        0|1:100:44      0|0:68:22       0|0:100:90
+22     16666200        .       G       A       .       PASS    AA=G;DP=155     GT:GQ:DP        0|1:100:44      0|0:68:23       0|0:100:87
+18     3212854 rs1662311       A       G       .       PASS    AA=a;DP=125     GT:GQ:DP        0|1:100:44      0|0:71:22       0|0:100:61
+8      126135494       rs57701401      C       T       .       PASS    AA=C;DP=171     GT:GQ:DP        0|1:100:44      0|0:72:35       0|0:90:30
+1      31642565        rs6425747       G       C       .       PASS    AA=G;DP=155;HM2;HM3     GT:GQ:DP        0|1:100:44      0|0:74:23       0|0:100:90
+2      165372883       rs16849792      C       T       .       PASS    AA=T;DP=132     GT:GQ:DP        0|1:100:44      0|0:77:24       0|0:100:63
+6      161559061       rs3778228       C       T       .       PASS    AA=C;DP=147     GT:GQ:DP        0|1:100:44      0|0:80:25       0|0:100:76
+11     34646845        rs61620932      G       A       .       PASS    AA=G;DP=168     GT:GQ:DP        0|1:100:44      0|0:83:28       0|0:100:50
+4      157983458       rs28454752      T       C       .       PASS    AA=C;DP=162     GT:GQ:DP        0|1:100:44      0|0:83:32       0|0:100:87
+19     44145556        .       C       T       .       PASS    AA=T;DP=169     GT:GQ:DP        0|1:100:44      0|0:86:28       0|0:100:52
+12     7157772 rs34379050      C       A       .       PASS    AA=C;DP=140     GT:GQ:DP        0|1:100:44      0|0:89:28       0|0:100:65
+17     52163425        rs16957740      T       C       .       PASS    AA=C;DP=164     GT:GQ:DP        0|1:100:44      0|0:89:28       0|0:100:96
+2      174517075       rs7588720       A       C       .       PASS    AA=A;DP=146     GT:GQ:DP        0|1:100:44      0|0:89:29       0|0:100:72
+7      29390298        rs4719970       T       C       .       PASS    AA=C;DP=161     GT:GQ:DP        0|1:100:44      0|0:90:36       0|0:100:80
+11     78220310        .       T       C       .       PASS    AA=T;DP=177     GT:GQ:DP        0|1:100:44      0|0:92:30       0|0:100:53
+3      39511840        rs11718481      A       T       .       PASS    AA=A;DP=113     GT:GQ:DP        0|1:100:44      0|0:98:31       0|0:87:30
+7      157451557       rs6957391       T       C       .       PASS    AA=N;DP=156     GT:GQ:DP        0|1:100:44      0|1:100:25      0|0:100:43
+9      89570275        rs4395969       T       C       .       PASS    AA=T;DP=143     GT:GQ:DP        0|1:100:44      0|1:100:30      0|0:100:69
+1      36613051        rs55811039      G       A       .       PASS    AA=A;DP=174     GT:GQ:DP        0|1:100:44      0|1:100:36      0|0:100:95
+1      165750293       rs2949662       T       C       .       PASS    AA=T;DP=126;HM2 GT:GQ:DP        0|1:100:44      0|1:85:17       0|0:100:65
+1      94778746        rs3748017       T       C       .       PASS    AA=T;DP=148;HM2 GT:GQ:DP        0|1:100:44      0|1:91:26       0|0:100:79
+11     68282346        rs2924700       G       A       .       PASS    AA=A;DP=145     GT:GQ:DP        0|1:100:44      1|1:19:18       0|1:100:85
+1      211155660       rs1770778       C       T       .       PASS    AA=T;DP=148;HM2 GT:GQ:DP        0|1:100:44      1|1:39:20       0|1:100:86
+11     19851047        rs7116164       G       A       .       PASS    AA=G;DP=150     GT:GQ:DP        0|1:100:44      1|1:66:25       0|1:100:80
+9      115143913       rs10981742      T       C       .       PASS    AA=C;DP=129     GT:GQ:DP        0|1:100:44      1|1:81:28       0|1:100:45
+1      212046346       rs12028562      T       C       .       PASS    AA=C;DP=148     GT:GQ:DP        0|1:100:45      0|0:100:34      0|0:100:70
+14     77120909        .       T       G       .       PASS    AA=T;DP=186     GT:GQ:DP        0|1:100:45      0|0:100:35      0|0:100:57
+15     51292423        rs16965706      C       T       .       PASS    AA=C;DP=162     GT:GQ:DP        0|1:100:45      0|0:100:37      0|0:100:37
+13     102638342       .       C       T       .       PASS    AA=c;DP=151     GT:GQ:DP        0|1:100:45      0|0:46:22       0|0:100:81
+14     73260696        .       C       T       .       PASS    AA=C;DP=129     GT:GQ:DP        0|1:100:45      0|0:59:18       0|0:100:64
+10     80512461        rs1866160       C       G       .       PASS    AA=C;DP=148     GT:GQ:DP        0|1:100:45      0|0:68:22       0|0:100:80
+20     55055165        rs331608        C       A       .       PASS    AA=C;DP=153     GT:GQ:DP        0|1:100:45      0|0:71:22       0|0:100:38
+7      154444705       rs446938        A       C       .       PASS    AA=C;DP=148     GT:GQ:DP        0|1:100:45      0|0:71:22       0|0:100:38
+3      102052023       .       A       T       .       PASS    AA=A;DP=117     GT:GQ:DP        0|1:100:45      0|0:74:23       0|0:100:47
+4      25504011        .       T       C       .       PASS    AA=T;DP=188     GT:GQ:DP        0|1:100:45      0|0:74:23       0|0:100:69
+17     6190778 .       C       T       .       PASS    AA=C;DP=145     GT:GQ:DP        0|1:100:45      0|0:77:25       0|0:100:74
+1      77712327        rs61080952      T       A       .       PASS    AA=T;DP=162     GT:GQ:DP        0|1:100:45      0|0:80:25       0|0:100:91
+14     68032257        rs3784131       T       G       .       PASS    AA=T;DP=164     GT:GQ:DP        0|1:100:45      0|0:83:26       0|0:100:47
+14     57146022        rs1745697       C       T       .       PASS    AA=C;DP=132     GT:GQ:DP        0|1:100:45      0|0:89:29       0|0:100:60
+9      357030  rs10972564      T       G       .       PASS    AA=T;DP=172     GT:GQ:DP        0|1:100:45      0|0:95:30       0|0:100:49
+12     111592637       rs11066378      T       G       .       PASS    AA=G;DP=146     GT:GQ:DP        0|1:100:45      0|0:98:31       0|0:100:73
+21     14710586        rs9974630       G       A       .       PASS    AA=A;DP=163     GT:GQ:DP        0|1:100:45      0|1:100:13      0|0:100:58
+8      145815695       rs11992503      C       G       .       PASS    AA=G;DP=169     GT:GQ:DP        0|1:100:45      0|1:60:12       0|0:100:68
+8      130649460       .       C       T       .       PASS    AA=C;DP=111     GT:GQ:DP        0|1:100:45      0|1:85:14       0|0:100:52
+12     38768381        rs1482281       C       T       .       PASS    AA=C;DP=126     GT:GQ:DP        0|1:100:45      0|1:99:24       0|0:100:54
+3      31009136        rs6550035       C       A       .       PASS    AA=A;DP=152     GT:GQ:DP        0|1:100:45      1|1:63:22       0|1:100:86
+2      85870576        rs1914821       T       C       .       PASS    AA=C;DP=153     GT:GQ:DP        0|1:100:45      1|1:75:27       0|1:100:83
+11     43853431        rs2434475       C       T       .       PASS    AA=T;DP=165     GT:GQ:DP        0|1:100:45      1|1:87:31       0|1:100:91
+5      96908983        .       G       C       .       PASS    AA=G;DP=140     GT:GQ:DP        0|1:100:46      0|0:100:37      0|0:100:60
+17     68215653        .       T       C       .       PASS    AA=T;DP=159     GT:GQ:DP        0|1:100:46      0|0:100:37      0|0:100:81
+13     27246317        rs4771166       T       C       .       PASS    AA=T;DP=133     GT:GQ:DP        0|1:100:46      0|0:58:20       0|0:100:68
+1      19044734        .       G       A       .       PASS    AA=G;DP=177     GT:GQ:DP        0|1:100:46      0|0:62:19       0|0:100:63
+17     56803740        rs28504402      T       C       .       PASS    AA=T;DP=140     GT:GQ:DP        0|1:100:46      0|0:68:21       0|0:100:73
+1      15410607        .       A       G       .       PASS    AA=A;DP=128     GT:GQ:DP        0|1:100:46      0|0:71:22       0|0:100:61
+1      153295877       rs3765087       A       C       .       PASS    AA=a;DP=142;HM2;HM3     GT:GQ:DP        0|1:100:46      0|0:74:24       0|0:93:31
+20     31229309        rs8117112       C       T       .       PASS    AA=C;DP=155     GT:GQ:DP        0|1:100:46      0|0:75:35       0|0:100:76
+11     29508821        rs10767812      T       C       .       PASS    AA=T;DP=165     GT:GQ:DP        0|1:100:46      0|0:89:28       0|0:100:89
+2      177634775       rs1529087       T       A       .       PASS    AA=A;DP=158     GT:GQ:DP        0|1:100:46      0|0:89:29       0|0:100:42
+3      73330120        rs13074807      T       C       .       PASS    AA=T;DP=170     GT:GQ:DP        0|1:100:46      0|0:92:29       0|0:100:51
+8      102963583       rs554945        G       A       .       PASS    AA=A;DP=170     GT:GQ:DP        0|1:100:46      0|1:100:21      0|0:100:107
+16     48555685        rs7188763       T       C       .       PASS    AA=C;DP=136     GT:GQ:DP        0|1:100:46      0|1:100:22      0|0:100:65
+2      8472503 rs2655457       A       C       .       PASS    AA=a;DP=160     GT:GQ:DP        0|1:100:46      0|1:100:25      0|0:100:49
+7      26529468        rs12700742      G       A       .       PASS    AA=A;DP=151     GT:GQ:DP        0|1:100:46      0|1:100:30      0|0:100:74
+22     22518193        rs59315374      C       G       .       PASS    AA=G;DP=154     GT:GQ:DP        0|1:100:46      0|1:67:19       0|0:100:88
+7      37025234        rs6946017       T       G       .       PASS    AA=T;DP=159     GT:GQ:DP        0|1:100:46      0|1:76:22       0|0:100:42
+8      126547972       rs57863956      G       A       .       PASS    AA=G;DP=134     GT:GQ:DP        0|1:100:46      0|1:93:17       0|0:100:75
+22     36013226        rs4566465       G       C       .       PASS    AA=G;DP=133     GT:GQ:DP        0|1:100:46      1|1:48:18       0|1:100:65
+17     28083911        rs4561522       C       T       .       PASS    AA=C;DP=174     GT:GQ:DP        0|1:100:46      1|1:66:30       0|1:100:98
+3      10844320        rs1485143       A       T       .       PASS    AA=T;DP=165     GT:GQ:DP        0|1:100:46      1|1:90:32       0|1:100:88
+6      90745716        .       G       A       .       PASS    AA=G;DP=153     GT:GQ:DP        0|1:100:47      0|0:100:34      0|0:100:73
+1      24818242        rs4487976       T       C       .       PASS    AA=T;DP=177     GT:GQ:DP        0|1:100:47      0|0:100:36      0|0:100:96
+19     2847818 rs8100809       C       T       .       PASS    AA=C;DP=162     GT:GQ:DP        0|1:100:47      0|0:52:22       0|0:100:93
+16     25156105        rs12930369      T       G       .       PASS    AA=T;DP=136     GT:GQ:DP        0|1:100:47      0|0:55:22       0|0:100:69
+16     27088637        rs10048132      G       A       .       PASS    AA=g;DP=139     GT:GQ:DP        0|1:100:47      0|0:62:20       0|0:100:73
+15     80031883        rs7171039       C       A       .       PASS    AA=C;DP=148     GT:GQ:DP        0|1:100:47      0|0:66:32       0|0:100:68
+22     42564377        .       T       G       .       PASS    AA=T;DP=159     GT:GQ:DP        0|1:100:47      0|0:68:21       0|0:100:93
+22     33817431        .       A       C       .       PASS    AA=A;DP=153     GT:GQ:DP        0|1:100:47      0|0:74:28       0|0:100:80
+10     80295966        .       G       C       .       PASS    AA=G;DP=122     GT:GQ:DP        0|1:100:47      0|0:77:24       0|0:100:42
+11     7437049 rs12278667      T       C       .       PASS    AA=T;DP=146     GT:GQ:DP        0|1:100:47      0|0:77:24       0|0:100:73
+7      73508298        .       G       A       .       PASS    AA=A;DP=161     GT:GQ:DP        0|1:100:47      0|0:80:28       0|0:100:86
+5      56231593        rs10063720      T       C       .       PASS    AA=T;DP=141     GT:GQ:DP        0|1:100:47      0|0:86:28       0|0:100:69
+4      89498601        .       T       C       .       PASS    AA=T;DP=162     GT:GQ:DP        0|1:100:47      0|0:88:34       0|0:100:83
+1      78406971        .       C       T       .       PASS    AA=C;DP=170     GT:GQ:DP        0|1:100:47      0|0:92:29       0|0:100:54
+2      22863785        rs10193123      T       C       .       PASS    AA=T;DP=165     GT:GQ:DP        0|1:100:47      0|0:92:29       0|0:100:88
+6      148973352       .       T       C       .       PASS    AA=T;DP=139     GT:GQ:DP        0|1:100:47      0|0:95:30       0|0:100:66
+11     75133021        rs600518        A       T       .       PASS    AA=T;DP=168     GT:GQ:DP        0|1:100:47      0|0:95:30       0|0:100:93
+8      80974707        rs2001721       G       A       .       PASS    AA=G;DP=167     GT:GQ:DP        0|1:100:47      0|1:100:27      0|0:100:47
+9      17957897        rs1778169       G       A       .       PASS    AA=A;DP=153     GT:GQ:DP        0|1:100:47      0|1:100:33      0|0:100:76
+14     74003299        rs28487998      A       G       .       PASS    AA=A;DP=152     GT:GQ:DP        0|1:100:47      1|1:13:16       0|1:100:88
+12     51206470        rs628232        T       C       .       PASS    AA=C;DP=157     GT:GQ:DP        0|1:100:47      1|1:48:18       0|1:100:90
+5      72825022        rs6453007       C       A       .       PASS    AA=A;DP=158     GT:GQ:DP        0|1:100:47      1|1:96:34       0|1:100:76
+16     4944973 .       G       T       .       PASS    AA=G;DP=144     GT:GQ:DP        0|1:100:48      0|0:42:21       0|0:100:71
+21     35966907        rs9980935       T       C       .       PASS    AA=C;DP=162     GT:GQ:DP        0|1:100:48      0|0:61:19       0|0:100:95
+9      18949521        rs4977479       C       T       .       PASS    AA=C;DP=145     GT:GQ:DP        0|1:100:48      0|0:71:22       0|0:100:78
+12     45323662        rs58806862      A       G       .       PASS    AA=A;DP=160     GT:GQ:DP        0|1:100:48      0|1:100:36      0|0:100:75
+13     35268802        rs3890217       C       A       .       PASS    AA=A;DP=149     GT:GQ:DP        0|1:100:48      1|1:37:20       0|1:100:82
+16     12151416        rs9922784       A       G       .       PASS    AA=A;DP=126     GT:GQ:DP        0|1:100:48      1|1:48:18       0|1:100:58
+18     7460492 rs16951836      T       C       .       PASS    AA=N;DP=171     GT:GQ:DP        0|1:100:48      1|1:55:30       0|1:100:82
+17     53618158        rs6503852       T       C       .       PASS    AA=T;DP=142     GT:GQ:DP        0|1:100:48      1|1:63:22       0|1:100:72
+9      101217377       rs4743349       C       T       .       PASS    AA=T;DP=138     GT:GQ:DP        0|1:100:48      1|1:78:28       0|1:100:60
+1      111703748       rs7511724       A       G       .       PASS    AA=A;DP=135;HM2 GT:GQ:DP        0|1:100:48      1|1:81:28       0|1:100:60
+20     13957394        rs12479467      A       C       .       PASS    AA=A;DP=144     GT:GQ:DP        0|1:100:49      0|0:44:13       0|0:100:83
+15     46166616        .       A       G       .       PASS    AA=A;DP=161     GT:GQ:DP        0|1:100:49      0|0:49:20       0|0:100:52
+20     13318796        .       C       A       .       PASS    AA=C;DP=147     GT:GQ:DP        0|1:100:49      0|0:59:25       0|0:100:63
+6      88121831        rs490447        T       C       .       PASS    AA=C;DP=110     GT:GQ:DP        0|1:100:49      0|0:68:21       0|0:96:34
+6      58007718        rs12662416      C       T       .       PASS    AA=C;DP=158     GT:GQ:DP        0|1:100:49      0|0:80:33       0|0:100:78
+2      242510627       .       T       G       .       PASS    AA=.;DP=160     GT:GQ:DP        0|1:100:49      0|1:76:31       0|0:100:82
+14     19322044        .       C       T       .       PASS    AA=C;DP=192     GT:GQ:DP        0|1:100:50      0|0:100:32      0|0:100:61
+5      157380327       rs7717217       C       T       .       PASS    AA=t;DP=155     GT:GQ:DP        0|1:100:50      0|0:44:13       0|0:93:43
+4      95302843        rs5025474       A       G       .       PASS    AA=A;DP=171     GT:GQ:DP        0|1:100:50      0|0:74:23       0|0:100:98
+11     68680173        rs3019751       T       C       .       PASS    AA=C;DP=154     GT:GQ:DP        0|1:100:50      1|1:45:16       0|1:100:84
+1      177726697       .       C       T       .       PASS    AA=C;DP=163     GT:GQ:DP        0|1:100:51      0|0:92:30       0|0:100:36
+8      12276256        .       G       A       .       PASS    AA=N;DP=186     GT:GQ:DP        0|1:100:51      0|0:92:30       0|0:100:60
+2      181781664       rs4441426       T       C       .       PASS    AA=C;DP=159     GT:GQ:DP        0|1:100:51      0|1:100:31      0|0:100:85
+5      174542450       rs1345733       G       C       .       PASS    AA=G;DP=139     GT:GQ:DP        0|1:100:51      1|1:57:20       0|1:100:68
+7      2738816 rs798529        T       C       .       PASS    AA=C;DP=141     GT:GQ:DP        0|1:100:52      0|0:89:29       0|0:100:61
+14     50517061        rs10134544      C       T       .       PASS    AA=C;DP=173     GT:GQ:DP        0|1:100:52      0|0:93:37       0|0:100:46
+3      178526148       .       G       A       .       PASS    AA=G;DP=167     GT:GQ:DP        0|1:100:53      0|0:50:15       0|0:100:100
+2      84112839        rs12474795      T       A       .       PASS    AA=T;DP=185     GT:GQ:DP        0|1:100:53      0|0:98:37       0|0:100:50
+12     1604868 .       C       T       .       PASS    AA=C;DP=149     GT:GQ:DP        0|1:100:54      0|0:71:24       0|0:100:71
+12     108311293       rs920224        G       A       .       PASS    AA=G;DP=150     GT:GQ:DP        0|1:100:54      0|0:83:30       0|0:100:46
+11     93812715        .       A       G       .       PASS    AA=A;DP=177     GT:GQ:DP        0|1:100:54      0|0:97:36       0|0:100:87
+1      165683494       .       G       A       .       PASS    AA=G;DP=178     GT:GQ:DP        0|1:100:55      0|0:83:26       0|0:100:53
+3      173944184       rs7652910       T       C       .       PASS    AA=T;DP=177     GT:GQ:DP        0|1:100:55      0|0:92:30       0|0:100:54
+4      156297962       .       T       G       .       PASS    AA=T;DP=157     GT:GQ:DP        0|1:100:56      0|0:71:22       0|0:100:82
+19     59432517        rs7256687       G       A       .       PASS    AA=G;DP=144     GT:GQ:DP        0|1:100:62      0|0:29:8        0|0:100:75
+5      101616275       rs61020641      G       A       .       PASS    AA=G;DP=82      GT:GQ:DP        0|1:100:9       0|0:50:15       0|0:100:58
+7      122580418       rs10953973      T       C       .       PASS    AA=T;DP=73      GT:GQ:DP        0|1:100:9       0|0:68:21       0|0:99:33
+6      41605132        rs7762074       C       G       .       PASS    AA=C;DP=121     GT:GQ:DP        0|1:10:33       0|1:78:17       0|0:100:71
+12     27623368        .       T       A       .       PASS    AA=A;DP=135     GT:GQ:DP        0|1:12:33       0|1:100:28      0|0:100:76
+21     16468956        .       A       T       .       PASS    AA=A;DP=59      GT:GQ:DP        0|1:13:17       0|1:53:18       0|0:19:16
+10     42249493        .       T       G       .       PASS    AA=T;DP=140     GT:GQ:DP        0|1:14:33       0|1:71:32       0|0:100:74
+3      80638675        rs7617319       T       C       .       PASS    AA=T;DP=70      GT:GQ:DP        0|1:15:18       1|1:42:15       0|1:100:38
+4      69640001        rs424254        T       C       .       PASS    AA=t;DP=66      GT:GQ:DP        0|1:15:19       1|1:33:12       0|1:100:19
+22     45979875        rs6008082       A       G       .       PASS    AA=G;DP=97      GT:GQ:DP        0|1:15:23       1|1:21:9        0|1:100:63
+20     30515360        rs1737893       C       T       .       PASS    AA=T;DP=99      GT:GQ:DP        0|1:15:29       1|1:30:11       0|1:100:59
+17     28316062        rs9903751       T       A       .       PASS    AA=A;DP=106     GT:GQ:DP        0|1:19:19       1|1:63:22       0|1:100:66
+5      58033154        rs149525        A       C       .       PASS    AA=C;DP=86      GT:GQ:DP        0|1:19:20       1|1:62:22       0|1:100:44
+5      21786134        rs1582956       G       A       .       PASS    AA=A;DP=73      GT:GQ:DP        0|1:21:18       1|1:51:19       0|1:100:23
+4      116583846       .       G       T       .       PASS    AA=G;DP=80      GT:GQ:DP        0|1:23:15       0|1:95:24       0|0:100:41
+18     25554376        rs9957718       G       A       .       PASS    AA=A;DP=92      GT:GQ:DP        0|1:23:19       1|1:87:30       0|1:100:39
+14     58336507        rs8009069       C       T       .       PASS    AA=T;DP=127     GT:GQ:DP        0|1:23:28       0|1:52:26       0|0:100:74
+14     54724139        rs56192604      G       A       .       PASS    AA=G;DP=74      GT:GQ:DP        0|1:24:25       0|1:48:10       0|0:84:29
+2      37917394        rs6715867       A       G       .       PASS    AA=G;DP=127     GT:GQ:DP        0|1:24:40       1|1:36:14       0|1:100:73
+7      124754846       rs34387420      T       C       .       PASS    AA=T;DP=82      GT:GQ:DP        0|1:25:21       1|1:45:18       0|1:100:44
+3      128552167       rs7426662       G       C       .       PASS    AA=G;DP=129     GT:GQ:DP        0|1:25:22       1|1:54:20       0|1:100:89
+14     80049867        rs7156719       G       C       .       PASS    AA=C;DP=110     GT:GQ:DP        0|1:25:25       0|1:100:19      0|0:100:63
+7      120335332       rs2721332       A       T       .       PASS    AA=A;DP=94      GT:GQ:DP        0|1:25:26       1|1:48:17       0|1:100:49
+14     25101722        rs12894028      C       G       .       PASS    AA=C;DP=83      GT:GQ:DP        0|1:26:15       1|1:43:25       0|1:26:44
+3      199306150       rs11916265      T       C       .       PASS    AA=.;DP=99      GT:GQ:DP        0|1:26:20       0|1:95:18       0|0:100:62
+7      156440680       rs12670963      T       C       .       PASS    AA=C;DP=133     GT:GQ:DP        0|1:27:35       1|1:39:16       0|1:100:83
+8      107517924       rs59746221      T       C       .       PASS    AA=T;DP=64      GT:GQ:DP        0|1:28:16       1|1:30:13       0|1:100:28
+8      22652463        rs7841894       T       C       .       PASS    AA=T;DP=137     GT:GQ:DP        0|1:28:38       1|1:57:20       0|1:100:81
+6      129447258       rs4144419       A       G       .       PASS    AA=a;DP=108     GT:GQ:DP        0|1:29:24       1|1:60:23       0|1:100:62
+14     68406385        rs17106441      G       C       .       PASS    AA=G;DP=133     GT:GQ:DP        0|1:29:29       0|1:100:23      0|0:100:83
+20     5580169 .       C       A       .       PASS    AA=C;DP=113     GT:GQ:DP        0|1:30:19       0|1:85:24       0|0:100:70
+10     18985945        rs11015411      G       T       .       PASS    AA=T;DP=88      GT:GQ:DP        0|1:30:22       1|1:9:14        0|1:100:51
+15     32505380        .       C       T       .       PASS    AA=.;DP=169     GT:GQ:DP        0|1:30:47       0|1:85:23       0|0:100:97
+2      156717659       rs1519793       C       G       .       PASS    AA=C;DP=106     GT:GQ:DP        0|1:31:17       0|1:97:28       0|0:100:61
+1      217813858       rs2184860       T       C       .       PASS    AA=C;DP=82      GT:GQ:DP        0|1:31:21       1|1:39:14       0|1:100:46
+10     35282800        .       A       G       .       PASS    AA=A;DP=124     GT:GQ:DP        0|1:31:24       0|1:100:27      0|0:100:74
+11     68191837        rs7104795       A       G       .       PASS    AA=G;DP=89      GT:GQ:DP        0|1:31:26       1|1:10:10       0|1:100:52
+12     122784989       rs10734908      C       A       .       PASS    AA=c;DP=128     GT:GQ:DP        0|1:31:32       0|1:100:21      0|0:100:75
+15     32991407        .       G       A       .       PASS    AA=G;DP=102     GT:GQ:DP        0|1:32:16       0|1:68:15       0|0:68:71
+1      242907406       .       A       T       .       PASS    AA=A;DP=93      GT:GQ:DP        0|1:32:18       1|1:36:14       0|1:100:62
+1      171413544       rs4090390       C       A       .       PASS    AA=A;DP=93;HM2  GT:GQ:DP        0|1:32:21       1|1:39:14       0|1:100:38
+8      70781852        rs34431060      G       A       .       PASS    AA=G;DP=96      GT:GQ:DP        0|1:33:17       1|1:30:16       0|1:100:65
+19     12266552        rs386901        T       C       .       PASS    AA=C;DP=86      GT:GQ:DP        0|1:33:20       1|1:14:11       0|1:100:61
+9      9219566 rs17667884      T       C       .       PASS    AA=C;DP=135     GT:GQ:DP        0|1:33:30       1|1:84:29       0|1:100:77
+3      185703954       rs9842470       C       T       .       PASS    AA=T;DP=72      GT:GQ:DP        0|1:33:9        1|1:31:17       0|1:100:44
+7      142111373       .       C       T       .       PASS    AA=-;DP=91      GT:GQ:DP        0|1:34:10       0|1:73:25       0|0:100:56
+7      54654266        rs7797106       A       G       .       PASS    AA=G;DP=132     GT:GQ:DP        0|1:35:20       0|1:54:16       0|0:100:94
+8      76040610        rs10092310      A       G       .       PASS    AA=G;DP=92      GT:GQ:DP        0|1:35:21       0|1:65:20       0|0:100:48
+1      69304917        rs2842034       A       G       .       PASS    AA=A;DP=94      GT:GQ:DP        0|1:35:24       1|1:60:21       0|1:100:50
+1      49138967        rs3127567       A       G       .       PASS    AA=A;DP=90;HM2  GT:GQ:DP        0|1:36:12       0|1:100:16      0|0:100:61
+5      95054682        rs2545636       A       G       .       PASS    AA=A;DP=89      GT:GQ:DP        0|1:36:14       1|1:26:12       0|1:100:63
+3      45600727        .       A       G       .       PASS    AA=A;DP=104     GT:GQ:DP        0|1:36:20       0|1:77:26       0|0:100:58
+15     25902850        rs3794609       G       A       .       PASS    AA=G;DP=124     GT:GQ:DP        0|1:36:26       0|1:100:21      0|0:93:33
+5      58885151        rs294478        T       G       .       PASS    AA=G;DP=94      GT:GQ:DP        0|1:37:15       1|1:39:14       0|1:100:65
+5      84709970        rs247711        T       C       .       PASS    AA=-;DP=99      GT:GQ:DP        0|1:37:21       1|1:60:21       0|1:100:61
+1      201641869       rs10920638      C       T       .       PASS    AA=T;DP=132;HM2;HM3     GT:GQ:DP        0|1:37:32       1|1:28:16       0|1:100:40
+5      8122529 rs1840158       A       G       .       PASS    AA=a;DP=86      GT:GQ:DP        0|1:38:19       1|1:36:14       0|1:100:53
+6      151125245       rs9383840       T       C       .       PASS    AA=N;DP=97      GT:GQ:DP        0|1:38:22       1|1:9:15        0|1:100:46
+1      23901103        rs516418        A       T       .       PASS    AA=a;DP=93      GT:GQ:DP        0|1:38:25       1|1:30:11       0|1:100:57
+20     56781213        rs2180796       C       T       .       PASS    AA=T;DP=106     GT:GQ:DP        0|1:38:25       1|1:39:15       0|1:100:66
+1      68430098        rs1430740       T       C       .       PASS    AA=T;DP=117;HM2 GT:GQ:DP        0|1:38:40       1|1:60:21       0|1:100:58
+2      56320372        rs969302        G       A       .       PASS    AA=G;DP=87      GT:GQ:DP        0|1:39:12       0|1:83:15       0|0:100:57
+10     109681435       .       T       C       .       PASS    AA=T;DP=86      GT:GQ:DP        0|1:39:12       1|1:45:16       0|1:100:58
+2      50079316        rs7559968       A       T       .       PASS    AA=a;DP=94      GT:GQ:DP        0|1:39:17       1|1:59:27       0|1:83:41
+16     59845898        rs13332115      G       A       .       PASS    AA=G;DP=98      GT:GQ:DP        0|1:39:22       0|1:38:17       0|0:100:59
+10     44478576        rs12783653      C       T       .       PASS    AA=C;DP=124     GT:GQ:DP        0|1:39:26       1|1:51:26       0|1:100:73
+9      30727773        rs7851044       C       T       .       PASS    AA=C;DP=70      GT:GQ:DP        0|1:40:15       1|1:48:18       0|1:100:39
+2      76977391        rs953854        T       A       .       PASS    AA=A;DP=116     GT:GQ:DP        0|1:40:17       0|1:100:25      0|0:84:30
+1      206556220       rs6689238       T       C       .       PASS    AA=C;DP=115;HM2;HM3     GT:GQ:DP        0|1:40:18       1|1:63:24       0|1:100:75
+10     5460248 rs11253172      T       A       .       PASS    AA=T;DP=104     GT:GQ:DP        0|1:40:20       0|1:38:11       0|0:100:76
+18     64577779        rs12458298      T       C       .       PASS    AA=T;DP=110     GT:GQ:DP        0|1:41:18       0|1:100:22      0|0:100:70
+2      157816828       rs35618483      C       T       .       PASS    AA=T;DP=102     GT:GQ:DP        0|1:41:18       0|1:87:24       0|0:100:60
+3      121353518       rs58043269      G       A       .       PASS    AA=G;DP=127     GT:GQ:DP        0|1:41:18       1|1:75:26       0|1:100:85
+11     21718309        rs10741902      A       G       .       PASS    AA=N;DP=115     GT:GQ:DP        0|1:41:31       1|1:16:17       0|1:100:67
+13     103919027       rs9582872       T       C       .       PASS    AA=T;DP=73      GT:GQ:DP        0|1:42:11       0|1:74:20       0|0:100:44
+4      137667893       rs4272066       A       T       .       PASS    AA=T;DP=76      GT:GQ:DP        0|1:42:12       1|1:48:17       0|1:100:47
+4      33068706        rs55681260      G       T       .       PASS    AA=T;DP=67      GT:GQ:DP        0|1:42:13       0|1:100:13      0|0:100:42
+2      238980286       rs6731229       C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        0|1:42:15       0|1:31:9        0|0:100:86
+14     82434642        rs17117637      A       G       .       PASS    AA=G;DP=126     GT:GQ:DP        0|1:42:19       0|1:100:24      0|0:100:83
+19     11852587        rs279222        A       C       .       PASS    AA=-;DP=113     GT:GQ:DP        0|1:42:29       0|1:39:16       0|0:100:67
+12     131476544       rs28516011      C       G       .       PASS    AA=G;DP=59      GT:GQ:DP        0|1:43:18       1|1:18:7        0|1:100:26
+14     105885493       .       G       T       .       PASS    AA=g;DP=89      GT:GQ:DP        0|1:43:19       1|1:15:6        0|1:100:65
+10     117457960       rs7909272       T       C       .       PASS    AA=C;DP=75      GT:GQ:DP        0|1:44:16       0|1:100:20      0|0:100:40
+4      83043631        rs28567404      T       C       .       PASS    AA=C;DP=121     GT:GQ:DP        0|1:44:18       1|1:51:19       0|1:100:76
+3      73846825        rs2221825       T       C       .       PASS    AA=T;DP=106     GT:GQ:DP        0|1:44:20       0|1:100:21      0|0:100:68
+21     41622280        rs449043        A       G       .       PASS    AA=A;DP=99      GT:GQ:DP        0|1:44:21       0|1:100:16      0|0:100:64
+7      152871358       rs4255050       G       A       .       PASS    AA=A;DP=112     GT:GQ:DP        0|1:44:22       0|1:100:26      0|0:100:64
+7      1529212 .       T       C       .       PASS    AA=C;DP=108     GT:GQ:DP        0|1:44:26       1|1:42:15       0|1:100:66
+8      30356379        rs6468318       T       C       .       PASS    AA=C;DP=96      GT:GQ:DP        0|1:44:27       0|1:53:21       0|0:100:49
+20     18410492        rs4813332       A       G       .       PASS    AA=N;DP=105     GT:GQ:DP        0|1:44:33       1|1:51:18       0|1:100:42
+7      80741195        rs2525778       A       G       .       PASS    AA=a;DP=134     GT:GQ:DP        0|1:44:40       1|1:23:25       0|1:100:69
+11     89968763        rs609337        G       A       .       PASS    AA=A;DP=95      GT:GQ:DP        0|1:45:12       0|1:82:16       0|0:100:54
+12     84166005        rs6539886       A       T       .       PASS    AA=T;DP=78      GT:GQ:DP        0|1:45:16       1|1:39:14       0|1:100:43
+14     90985926        rs36103378      T       C       .       PASS    AA=N;DP=111     GT:GQ:DP        0|1:45:23       0|1:65:21       0|0:100:67
+15     39955310        rs1197676       G       A       .       PASS    AA=G;DP=127     GT:GQ:DP        0|1:45:35       0|1:55:18       0|0:100:74
+3      8325853 rs11925887      A       G       .       PASS    AA=A;DP=101     GT:GQ:DP        0|1:46:17       0|1:24:21       0|0:100:60
+2      4127108 rs1898521       A       G       .       PASS    AA=G;DP=88      GT:GQ:DP        0|1:46:23       1|1:24:20       0|1:100:35
+2      33293049        rs4671016       T       C       .       PASS    AA=C;DP=138     GT:GQ:DP        0|1:46:23       1|1:84:29       0|1:100:51
+11     77359222        rs12786047      T       C       .       PASS    AA=T;DP=110     GT:GQ:DP        0|1:46:24       1|1:31:19       0|1:100:67
+10     108761855       rs11816321      G       A       .       PASS    AA=G;DP=117     GT:GQ:DP        0|1:46:26       0|1:100:20      0|0:100:72
+12     42530537        rs1731448       A       G       .       PASS    AA=A;DP=138     GT:GQ:DP        0|1:46:26       0|1:100:34      0|0:100:77
+8      59782520        rs7840939       A       T       .       PASS    AA=T;DP=107     GT:GQ:DP        0|1:47:19       0|1:100:17      0|0:90:31
+7      34354078        rs1419808       G       T       .       PASS    AA=T;DP=70      GT:GQ:DP        0|1:48:15       1|1:9:14        0|1:100:41
+6      129076894       rs9492052       A       C       .       PASS    AA=C;DP=93      GT:GQ:DP        0|1:48:21       0|1:55:15       0|0:100:56
+5      101745271       rs6873738       A       C       .       PASS    AA=A;DP=91      GT:GQ:DP        0|1:48:22       0|1:100:20      0|0:100:51
+9      12386385        rs10960659      C       T       .       PASS    AA=c;DP=126     GT:GQ:DP        0|1:48:23       0|1:100:19      0|0:100:87
+5      142561329       .       T       G       .       PASS    AA=T;DP=116     GT:GQ:DP        0|1:48:24       1|1:5:18        0|1:100:71
+15     24499185        rs28835419      A       G       .       PASS    AA=A;DP=95      GT:GQ:DP        0|1:48:25       0|1:89:25       0|0:100:45
+15     78611464        rs4778803       C       T       .       PASS    AA=T;DP=149     GT:GQ:DP        0|1:48:25       1|1:61:27       0|1:100:55
+19     6574791 rs413956        A       T       .       PASS    AA=t;DP=110     GT:GQ:DP        0|1:49:14       0|1:100:28      0|0:100:70
+8      119583616       rs11774748      A       G       .       PASS    AA=A;DP=99      GT:GQ:DP        0|1:49:16       1|1:63:23       0|1:100:59
+7      21626688        rs11972496      C       T       .       PASS    AA=T;DP=70      GT:GQ:DP        0|1:49:16       1|1:7:13        0|1:100:43
+7      49928312        rs4916999       C       T       .       PASS    AA=C;DP=108     GT:GQ:DP        0|1:49:21       0|1:88:22       0|0:100:66
+20     8398171 rs6055837       A       G       .       PASS    AA=N;DP=97      GT:GQ:DP        0|1:50:13       0|1:79:15       0|0:100:71
+6      159373185       rs4521617       C       T       .       PASS    AA=T;DP=111     GT:GQ:DP        0|1:50:17       0|1:13:20       0|0:96:33
+7      141562064       rs2961056       C       T       .       PASS    AA=T;DP=73      GT:GQ:DP        0|1:50:18       1|1:12:14       0|1:100:40
+1      69496681        rs2791210       A       G       .       PASS    AA=G;DP=101     GT:GQ:DP        0|1:51:19       1|1:60:22       0|1:100:58
+14     79895047        rs969598        C       T       .       PASS    AA=T;DP=101     GT:GQ:DP        0|1:51:20       1|1:42:16       0|1:100:66
+7      28933707        rs1636768       G       C       .       PASS    AA=G;DP=97      GT:GQ:DP        0|1:51:21       0|1:31:17       0|0:100:61
+7      45109633        rs2119056       T       C       .       PASS    AA=C;DP=100     GT:GQ:DP        0|1:51:29       1|1:18:7        0|1:100:58
+20     38632250        rs4812443       T       G       .       PASS    AA=G;DP=124     GT:GQ:DP        0|1:51:31       0|1:100:24      0|0:100:72
+3      134615785       rs11711011      G       C       .       PASS    AA=N;DP=85      GT:GQ:DP        0|1:52:21       1|1:15:6        0|1:100:59
+4      181243904       rs4861830       G       A       .       PASS    AA=G;DP=88      GT:GQ:DP        0|1:52:21       1|1:63:22       0|1:100:46
+2      202710853       rs4494723       G       A       .       PASS    AA=A;DP=100     GT:GQ:DP        0|1:52:24       0|1:64:21       0|0:100:54
+8      130904420       rs837066        T       C       .       PASS    AA=T;DP=81      GT:GQ:DP        0|1:53:10       0|1:88:15       0|0:100:55
+1      240112599       rs1632285       A       G       .       PASS    AA=A;DP=98      GT:GQ:DP        0|1:53:15       1|1:51:19       0|1:100:69
+11     22664432        rs1499245       T       C       .       PASS    AA=T;DP=78      GT:GQ:DP        0|1:53:16       0|1:99:16       0|0:100:45
+21     33370165        .       G       A       .       PASS    AA=G;DP=109     GT:GQ:DP        0|1:53:27       0|1:100:18      0|0:100:64
+6      77999776        rs10806089      C       T       .       PASS    AA=T;DP=94      GT:GQ:DP        0|1:54:17       0|1:100:17      0|0:100:61
+5      128586789       rs6866364       T       G       .       PASS    AA=T;DP=109     GT:GQ:DP        0|1:54:18       0|1:100:27      0|0:100:68
+22     46793258        rs5766988       C       T       .       PASS    AA=C;DP=107     GT:GQ:DP        0|1:54:19       0|1:33:24       0|0:100:67
+1      96595674        rs325950        C       A       .       PASS    AA=C;DP=93;HM2  GT:GQ:DP        0|1:54:22       0|1:100:22      0|0:100:50
+9      107990896       rs7025685       C       T       .       PASS    AA=T;DP=84      GT:GQ:DP        0|1:54:23       1|1:25:15       0|1:100:46
+7      63124956        .       G       C       .       PASS    AA=G;DP=136     GT:GQ:DP        0|1:54:30       0|1:49:24       0|0:95:83
+14     84722576        .       T       C       .       PASS    AA=T;DP=139     GT:GQ:DP        0|1:54:31       0|1:100:21      0|0:100:87
+12     76471240        rs12371938      A       G       .       PASS    AA=G;DP=78      GT:GQ:DP        0|1:55:11       1|1:36:13       0|1:100:52
+8      78976491        rs10099432      A       G       .       PASS    AA=A;DP=105     GT:GQ:DP        0|1:55:17       0|1:100:20      0|0:100:69
+13     107879999       rs4460934       T       C       .       PASS    AA=t;DP=101     GT:GQ:DP        0|1:55:23       1|1:30:11       0|1:100:67
+11     23605066        rs7949051       G       C       .       PASS    AA=.;DP=109     GT:GQ:DP        0|1:55:25       0|1:97:17       0|0:100:65
+14     29264650        rs11626603      T       C       .       PASS    AA=C;DP=120     GT:GQ:DP        0|1:56:18       0|1:92:24       0|0:90:31
+1      53511965        rs11206133      A       G       .       PASS    AA=G;DP=135     GT:GQ:DP        0|1:56:26       0|1:100:23      0|0:100:89
+14     89508082        rs35483543      A       G       .       PASS    AA=A;DP=139     GT:GQ:DP        0|1:56:29       0|1:100:26      0|0:100:84
+5      30769171        rs35275974      T       C       .       PASS    AA=T;DP=86      GT:GQ:DP        0|1:57:14       0|1:35:16       0|0:100:51
+6      152478709       rs2747652       T       C       .       PASS    AA=C;DP=88      GT:GQ:DP        0|1:57:17       1|1:42:15       0|1:100:56
+17     3236340 rs2931819       C       G       .       PASS    AA=G;DP=69      GT:GQ:DP        0|1:57:20       1|1:21:8        0|1:95:38
+3      30565370        rs62242964      G       T       .       PASS    AA=G;DP=97      GT:GQ:DP        0|1:57:21       1|1:15:14       0|1:100:62
+11     24777023        rs1486694       A       G       .       PASS    AA=G;DP=119     GT:GQ:DP        0|1:57:22       1|1:75:26       0|1:100:71
+5      1432269 rs11133756      A       C       .       PASS    AA=a;DP=118     GT:GQ:DP        0|1:57:25       1|1:12:19       0|1:100:74
+11     13026524        rs7939935       T       C       .       PASS    AA=T;DP=130     GT:GQ:DP        0|1:57:29       0|1:100:23      0|0:100:78
+13     106499850       rs28531954      T       G       .       PASS    AA=T;DP=77      GT:GQ:DP        0|1:58:15       0|1:100:14      0|0:100:46
+4      121637940       rs4833643       T       G       .       PASS    AA=T;DP=96      GT:GQ:DP        0|1:58:18       0|1:100:19      0|0:100:60
+16     86751805        rs56357306      G       C       .       PASS    AA=g;DP=76      GT:GQ:DP        0|1:58:23       0|1:13:9        0|0:87:32
+18     38409438        rs3924665       A       G       .       PASS    AA=A;DP=122     GT:GQ:DP        0|1:58:26       1|1:54:21       0|1:100:76
+5      1567462 rs13167887      A       G       .       PASS    AA=A;DP=131     GT:GQ:DP        0|1:58:34       0|1:37:17       0|0:100:79
+12     12590761        rs12297678      T       A       .       PASS    AA=T;DP=138     GT:GQ:DP        0|1:58:35       0|1:100:18      0|0:100:85
+7      30237277        rs7800686       T       G       .       PASS    AA=G;DP=94      GT:GQ:DP        0|1:58:36       1|1:5:11        0|1:100:36
+1      3738962 rs61768913      A       G       .       PASS    AA=a;DP=122     GT:GQ:DP        0|1:58:8        0|0:69:34       0|0:58:82
+12     71131946        rs12301567      G       A       .       PASS    AA=G;DP=93      GT:GQ:DP        0|1:59:13       0|1:50:15       0|0:100:66
+4      71406354        rs28673399      G       A       .       PASS    AA=G;DP=101     GT:GQ:DP        0|1:59:13       0|1:59:16       0|0:100:70
+2      186485972       rs12693421      A       G       .       PASS    AA=a;DP=75      GT:GQ:DP        0|1:59:18       1|1:33:12       0|1:100:45
+3      170292953       rs2041878       A       G       .       PASS    AA=A;DP=82      GT:GQ:DP        0|1:59:19       0|1:100:20      0|0:100:42
+21     44566282        rs4818904       T       C       .       PASS    AA=C;DP=86      GT:GQ:DP        0|1:59:19       1|1:18:8        0|1:100:59
+1      164993553       rs495686        A       C       .       PASS    AA=C;DP=92      GT:GQ:DP        0|1:59:20       1|1:41:20       0|1:100:51
+11     37511386        rs7120139       T       G       .       PASS    AA=G;DP=88      GT:GQ:DP        0|1:59:20       1|1:5:18        0|1:100:41
+5      26107762        rs1411582       A       T       .       PASS    AA=T;DP=106     GT:GQ:DP        0|1:59:27       1|1:46:24       0|1:100:56
+19     63243855        .       C       G       .       PASS    AA=C;DP=95      GT:GQ:DP        0|1:59:28       0|1:54:10       0|0:100:50
+2      35467670        rs4353627       T       C       .       PASS    AA=C;DP=58      GT:GQ:DP        0|1:5:12        0|1:100:23      0|0:5:14
+6      22952658        rs2018387       T       A       .       PASS    AA=T;DP=64      GT:GQ:DP        0|1:5:12        1|1:5:12        0|1:14:43
+2      22916202        rs6544241       A       G       .       PASS    AA=a;DP=74      GT:GQ:DP        0|1:60:13       1|1:45:21       0|1:100:26
+15     89377950        rs11632664      T       G       .       PASS    AA=G;DP=121     GT:GQ:DP        0|1:60:17       1|1:22:16       0|1:100:89
+3      158578219       .       G       T       .       PASS    AA=G;DP=100     GT:GQ:DP        0|1:60:20       1|1:14:19       0|1:100:55
+13     104226811       rs323460        C       T       .       PASS    AA=T;DP=112     GT:GQ:DP        0|1:60:20       1|1:81:28       0|1:100:64
+2      149144264       rs13013424      G       T       .       PASS    AA=T;DP=102     GT:GQ:DP        0|1:60:22       1|1:45:16       0|1:100:66
+5      111883551       rs401722        G       C       .       PASS    AA=C;DP=107     GT:GQ:DP        0|1:60:22       1|1:55:22       0|1:100:63
+3      12449986        rs4135299       G       A       .       PASS    AA=G;DP=101     GT:GQ:DP        0|1:60:24       0|1:100:19      0|0:100:59
+15     57805779        rs8037172       A       G       .       PASS    AA=G;DP=100     GT:GQ:DP        0|1:60:28       1|1:33:12       0|1:100:60
+5      1322132 rs6863697       T       C       .       PASS    AA=t;DP=128     GT:GQ:DP        0|1:60:32       0|1:29:24       0|0:100:74
+X      3619919 .       A       C       .       PASS    AA=a;DP=118     GT:GQ:DP        0|1:60:9        0|0:65:31       0|0:56:30
+7      71042946        rs4719196       C       T       .       PASS    AA=T;DP=100     GT:GQ:DP        0|1:61:13       0|1:72:20       0|0:100:67
+13     111642134       rs552913        T       C       .       PASS    AA=T;DP=92      GT:GQ:DP        0|1:61:17       0|1:61:8        0|0:100:67
+7      105902173       rs59524101      C       T       .       PASS    AA=C;DP=103     GT:GQ:DP        0|1:61:18       0|1:100:23      0|0:100:62
+4      105914560       rs2651355       A       G       .       PASS    AA=G;DP=96      GT:GQ:DP        0|1:61:20       1|1:48:18       0|1:100:58
+9      133121838       rs352960        A       G       .       PASS    AA=A;DP=83      GT:GQ:DP        0|1:61:23       1|1:27:10       0|1:100:44
+3      13039329        rs360851        A       G       .       PASS    AA=G;DP=141     GT:GQ:DP        0|1:61:32       0|1:14:15       0|0:100:95
+4      188857663       rs4376192       G       A       .       PASS    AA=A;DP=84      GT:GQ:DP        0|1:62:13       1|1:54:19       0|1:100:51
+5      99063999        rs7733061       A       G       .       PASS    AA=G;DP=62      GT:GQ:DP        0|1:62:16       1|1:30:11       0|1:100:26
+5      86192546        rs4421141       T       C       .       PASS    AA=T;DP=80      GT:GQ:DP        0|1:62:17       0|1:86:13       0|0:100:48
+5      120464367       rs55844821      T       A       .       PASS    AA=A;DP=91      GT:GQ:DP        0|1:62:19       0|1:100:19      0|0:100:54
+16     70193340        rs58909593      C       A       .       PASS    AA=C;DP=88      GT:GQ:DP        0|1:62:21       1|1:7:13        0|1:100:53
+3      69746779        rs9840980       T       C       .       PASS    AA=C;DP=101     GT:GQ:DP        0|1:62:23       1|1:60:21       0|1:100:57
+12     25260970        rs11047898      T       C       .       PASS    AA=T;DP=112     GT:GQ:DP        0|1:62:25       0|1:100:23      0|0:100:67
+8      32399736        rs11780822      A       G       .       PASS    AA=N;DP=124     GT:GQ:DP        0|1:62:27       1|1:51:20       0|1:100:81
+21     18535753        rs58028404      G       A       .       PASS    AA=G;DP=119     GT:GQ:DP        0|1:62:27       1|1:69:24       0|1:100:67
+3      42304925        rs9823936       T       G       .       PASS    AA=T;DP=140     GT:GQ:DP        0|1:62:30       0|1:100:25      0|0:100:85
+5      84282058        rs16901338      C       T       .       PASS    AA=C;DP=87      GT:GQ:DP        0|1:63:14       0|1:69:14       0|0:100:60
+4      36542225        .       A       T       .       PASS    AA=A;DP=95      GT:GQ:DP        0|1:63:16       0|1:100:28      0|0:100:53
+7      4365567 rs59015221      G       C       .       PASS    AA=C;DP=135     GT:GQ:DP        0|1:63:19       0|1:32:17       0|0:100:54
+2      57512274        rs7591908       T       A       .       PASS    AA=T;DP=104     GT:GQ:DP        0|1:63:20       1|1:48:18       0|1:100:63
+3      190796170       .       A       G       .       PASS    AA=A;DP=133     GT:GQ:DP        0|1:63:23       0|1:100:23      0|0:100:42
+4      185097150       rs4862270       C       G       .       PASS    AA=G;DP=121     GT:GQ:DP        0|1:63:26       1|1:72:27       0|1:100:65
+3      161154958       rs524841        A       G       .       PASS    AA=A;DP=112     GT:GQ:DP        0|1:63:29       0|1:100:14      0|0:100:59
+14     37316191        rs8016889       A       G       .       PASS    AA=A;DP=110     GT:GQ:DP        0|1:64:16       0|1:100:17      0|0:90:31
+1      2353187 rs2494640       G       C       .       PASS    AA=T;DP=102;HM2;HM3     GT:GQ:DP        0|1:64:19       1|1:24:9        0|1:100:73
+2      209680127       rs2177137       C       T       .       PASS    AA=T;DP=114     GT:GQ:DP        0|1:64:20       0|1:100:24      0|0:90:32
+7      5483466 rs7808325       C       T       .       PASS    AA=C;DP=106     GT:GQ:DP        0|1:64:21       0|1:75:15       0|0:100:62
+12     125925795       rs56386424      T       C       .       PASS    AA=C;DP=118     GT:GQ:DP        0|1:64:21       0|1:86:21       0|0:100:76
+16     23781420        rs8052865       T       A       .       PASS    AA=T;DP=97      GT:GQ:DP        0|1:64:23       1|1:41:23       0|1:100:41
+18     64819792        rs4891718       C       T       .       PASS    AA=T;DP=85      GT:GQ:DP        0|1:65:11       0|1:100:17      0|0:100:57
+5      29067398        rs4866998       G       C       .       PASS    AA=G;DP=81      GT:GQ:DP        0|1:65:13       0|1:100:24      0|0:100:45
+4      123560609       rs7684187       G       A       .       PASS    AA=A;DP=81      GT:GQ:DP        0|1:65:17       1|1:33:12       0|1:100:54
+4      115437086       rs4834394       G       A       .       PASS    AA=a;DP=82      GT:GQ:DP        0|1:65:18       1|1:39:16       0|1:100:39
+6      167729816       rs6921128       G       A       .       PASS    AA=.;DP=76      GT:GQ:DP        0|1:65:19       1|1:36:13       0|1:100:38
+2      185495831       rs1594166       G       T       .       PASS    AA=g;DP=124     GT:GQ:DP        0|1:65:21       0|1:100:28      0|0:100:62
+2      180460178       rs12328332      G       C       .       PASS    AA=G;DP=100     GT:GQ:DP        0|1:65:21       0|1:97:18       0|0:100:61
+16     87014081        rs4782360       T       G       .       PASS    AA=G;DP=103     GT:GQ:DP        0|1:65:23       1|1:30:12       0|1:100:67
+18     52965178        rs7506538       T       G       .       PASS    AA=T;DP=109     GT:GQ:DP        0|1:65:25       1|1:29:16       0|1:100:67
+9      115650250       .       G       A       .       PASS    AA=G;DP=119     GT:GQ:DP        0|1:65:28       0|1:22:21       0|0:100:69
+8      13971100        .       A       T       .       PASS    AA=A;DP=119     GT:GQ:DP        0|1:65:30       0|1:76:26       0|0:100:62
+18     52000083        rs1631880       T       C       .       PASS    AA=C;DP=78      GT:GQ:DP        0|1:66:17       1|1:39:14       0|1:100:46
+13     66345545        rs9317622       A       G       .       PASS    AA=G;DP=90      GT:GQ:DP        0|1:66:18       0|1:100:13      0|0:100:60
+2      15799699        rs13423221      A       T       .       PASS    AA=t;DP=84      GT:GQ:DP        0|1:66:19       1|1:26:16       0|1:100:47
+13     84166327        rs4514569       C       A       .       PASS    AA=A;DP=67      GT:GQ:DP        0|1:66:23       1|1:5:11        0|1:100:25
+19     56584495        rs8104425       T       C       .       PASS    AA=C;DP=85      GT:GQ:DP        0|1:66:25       0|1:40:10       0|0:100:53
+16     82297627        rs1364120       T       C       .       PASS    AA=T;DP=152     GT:GQ:DP        0|1:66:36       1|1:69:26       0|1:100:71
+6      132131666       rs13216310      C       T       .       PASS    AA=T;DP=120     GT:GQ:DP        0|1:66:38       1|1:69:25       0|1:100:57
+3      84739923        rs59707627      A       T       .       PASS    AA=T;DP=66      GT:GQ:DP        0|1:67:10       1|1:10:15       0|1:100:31
+15     30925445        rs1258785       A       T       .       PASS    AA=A;DP=68      GT:GQ:DP        0|1:67:12       0|1:60:10       0|0:100:45
+7      114708995       rs7787902       G       A       .       PASS    AA=A;DP=61      GT:GQ:DP        0|1:67:16       1|1:51:19       0|1:100:17
+18     56543289        .       C       T       .       PASS    AA=C;DP=124     GT:GQ:DP        0|1:67:17       0|1:100:27      0|0:100:36
+14     83170895        rs4899836       A       G       .       PASS    AA=G;DP=85      GT:GQ:DP        0|1:67:17       1|1:36:13       0|1:100:54
+2      191875112       .       A       G       .       PASS    AA=G;DP=128     GT:GQ:DP        0|1:67:20       0|1:100:28      0|0:100:77
+16     9794461 rs7186955       T       C       .       PASS    AA=C;DP=133     GT:GQ:DP        0|1:67:24       1|1:52:30       0|1:100:78
+4      64621870        .       A       G       .       PASS    AA=A;DP=119     GT:GQ:DP        0|1:67:26       0|1:54:30       0|0:32:65
+1      241036441       rs2780787       C       T       .       PASS    AA=T;DP=100     GT:GQ:DP        0|1:67:26       1|1:36:14       0|1:100:58
+14     77452901        rs17106611      A       G       .       PASS    AA=A;DP=132     GT:GQ:DP        0|1:67:27       0|1:61:22       0|0:100:83
+22     31906488        rs137364        T       C       .       PASS    AA=T;DP=105     GT:GQ:DP        0|1:67:29       0|1:100:22      0|0:100:52
+1      17286892        rs742795        C       A       .       PASS    AA=C;DP=104     GT:GQ:DP        0|1:67:29       1|1:26:18       0|1:100:57
+8      6237102 rs4840340       G       C       .       PASS    AA=C;DP=129     GT:GQ:DP        0|1:67:32       1|1:84:29       0|1:100:68
+5      161750752       rs13189615      T       C       .       PASS    AA=C;DP=87      GT:GQ:DP        0|1:68:11       1|1:51:18       0|1:100:59
+2      76739039        rs6547093       A       T       .       PASS    AA=A;DP=66      GT:GQ:DP        0|1:68:14       1|1:32:13       0|1:100:33
+21     36399616        rs1124086       C       T       .       PASS    AA=T;DP=108     GT:GQ:DP        0|1:68:17       0|1:56:15       0|0:100:76
+9      136624567       rs10858252      C       T       .       PASS    AA=C;DP=116     GT:GQ:DP        0|1:68:23       0|1:61:12       0|0:100:84
+4      141561158       rs2043160       T       A       .       PASS    AA=T;DP=70      GT:GQ:DP        0|1:68:25       0|1:70:16       0|0:72:26
+13     66426574        rs1323917       T       C       .       PASS    AA=T;DP=99      GT:GQ:DP        0|1:68:30       1|1:48:17       0|1:100:54
+4      136144204       rs13137654      A       G       .       PASS    AA=A;DP=91      GT:GQ:DP        0|1:69:16       0|1:84:19       0|0:100:54
+7      123799309       rs6466912       G       C       .       PASS    AA=G;DP=90      GT:GQ:DP        0|1:69:19       0|1:100:24      0|0:100:44
+20     22210264        rs1569781       G       T       .       PASS    AA=T;DP=81      GT:GQ:DP        0|1:69:19       1|1:60:21       0|1:100:41
+8      127785369       rs2101518       C       T       .       PASS    AA=C;DP=122     GT:GQ:DP        0|1:69:21       0|1:100:32      0|0:100:69
+2      149719629       rs229315        T       C       .       PASS    AA=t;DP=118     GT:GQ:DP        0|1:69:21       1|1:72:27       0|1:100:69
+8      72225543        rs7814031       G       A       .       PASS    AA=G;DP=108     GT:GQ:DP        0|1:69:24       0|1:28:10       0|0:100:75
+4      10500905        .       C       G       .       PASS    AA=C;DP=124     GT:GQ:DP        0|1:69:24       0|1:55:15       0|0:100:89
+20     24147047        rs507148        A       C       .       PASS    AA=A;DP=135     GT:GQ:DP        0|1:69:26       1|1:87:30       0|1:100:79
+7      11134537        rs7811934       T       G       .       PASS    AA=T;DP=98      GT:GQ:DP        0|1:70:14       0|1:100:26      0|0:100:58
+16     10579027        rs28508127      T       C       .       PASS    AA=T;DP=106     GT:GQ:DP        0|1:70:16       1|1:48:17       0|1:100:73
+6      113459574       rs1680127       G       C       .       PASS    AA=G;DP=96      GT:GQ:DP        0|1:70:18       1|1:48:17       0|1:100:62
+1      163990394       rs10800155      A       G       .       PASS    AA=A;DP=82;HM2  GT:GQ:DP        0|1:70:20       1|1:20:16       0|1:100:46
+16     78024819        rs28551747      C       A       .       PASS    AA=C;DP=119     GT:GQ:DP        0|1:70:22       0|1:100:27      0|0:100:69
+9      20081810        rs6475402       C       T       .       PASS    AA=T;DP=145     GT:GQ:DP        0|1:70:23       0|1:100:34      0|0:87:42
+12     53265093        rs1144997       T       C       .       PASS    AA=C;DP=124     GT:GQ:DP        0|1:70:25       1|1:60:23       0|1:100:72
+1      53858789        rs3006900       T       G       .       PASS    AA=G;DP=136;HM2;HM3     GT:GQ:DP        0|1:70:29       1|1:42:23       0|1:100:85
+13     76833360        rs7321675       G       A       .       PASS    AA=A;DP=105     GT:GQ:DP        0|1:70:29       1|1:54:20       0|1:100:58
+15     77677923        rs8039963       G       T       .       PASS    AA=G;DP=123     GT:GQ:DP        0|1:70:36       0|1:100:29      0|0:100:61
+4      9836986 rs11934800      T       G       .       PASS    AA=T;DP=74      GT:GQ:DP        0|1:71:19       0|0:23:14       0|0:71:41
+10     91786150        rs12254739      T       C       .       PASS    AA=T;DP=89      GT:GQ:DP        0|1:71:19       1|1:16:13       0|1:100:57
+16     75059110        rs1002975       C       A       .       PASS    AA=A;DP=121     GT:GQ:DP        0|1:71:22       0|1:100:26      0|0:100:66
+1      149242837       rs1545626       A       G       .       PASS    AA=G;DP=116;HM2;HM3     GT:GQ:DP        0|1:71:22       1|1:22:18       0|1:100:37
+14     102824142       rs10134705      G       C       .       PASS    AA=C;DP=90      GT:GQ:DP        0|1:71:25       0|1:55:14       0|0:100:53
+10     99665755        .       G       A       .       PASS    AA=G;DP=107     GT:GQ:DP        0|1:71:26       0|1:37:13       0|0:100:67
+6      3572686 rs6928959       A       G       .       PASS    AA=A;DP=126     GT:GQ:DP        0|1:71:26       1|1:69:27       0|1:100:74
+16     27972895        rs9923468       T       C       .       PASS    AA=C;DP=123     GT:GQ:DP        0|1:71:27       0|1:62:16       0|0:100:82
+11     70881740        rs4944075       T       C       .       PASS    AA=C;DP=130     GT:GQ:DP        0|1:71:33       0|1:43:19       0|0:100:79
+2      126194041       rs2052811       C       T       .       PASS    AA=C;DP=81      GT:GQ:DP        0|1:72:12       1|1:51:19       0|1:100:51
+9      115906778       rs6478064       A       C       .       PASS    AA=A;DP=89      GT:GQ:DP        0|1:72:16       1|1:19:18       0|1:100:56
+14     105844044       .       T       A       .       PASS    AA=.;DP=88      GT:GQ:DP        0|1:72:17       0|1:12:10       0|0:89:61
+1      36508986        rs2358722       G       A       .       PASS    AA=A;DP=87      GT:GQ:DP        0|1:72:27       1|1:10:13       0|1:100:35
+4      3233891 rs57480689      C       T       .       PASS    AA=c;DP=119     GT:GQ:DP        0|1:72:27       1|1:22:11       0|1:100:82
+10     76508119        rs10762654      G       T       .       PASS    AA=G;DP=112     GT:GQ:DP        0|1:72:29       1|1:41:17       0|1:100:58
+2      214673850       rs6756137       G       A       .       PASS    AA=G;DP=86      GT:GQ:DP        0|1:73:13       0|1:100:14      0|0:100:62
+1      67337327        rs6690573       T       G       .       PASS    AA=G;DP=89      GT:GQ:DP        0|1:73:15       1|1:27:21       0|1:100:54
+11     24164094        rs28552633      A       C       .       PASS    AA=C;DP=62      GT:GQ:DP        0|1:73:17       0|1:66:17       0|0:75:26
+4      177676519       rs407993        C       T       .       PASS    AA=T;DP=120     GT:GQ:DP        0|1:73:18       0|1:97:28       0|0:100:74
+19     53452556        rs7248752       C       T       .       PASS    AA=C;DP=94      GT:GQ:DP        0|1:73:25       1|1:33:17       0|1:100:52
+7      50119318        rs10277913      A       C       .       PASS    AA=T;DP=83      GT:GQ:DP        0|1:73:25       1|1:42:15       0|1:100:42
+3      28787534        rs6764436       T       C       .       PASS    AA=N;DP=146     GT:GQ:DP        0|1:73:26       1|1:62:32       0|1:100:91
+11     134132702       rs55870300      T       C       .       PASS    AA=T;DP=119     GT:GQ:DP        0|1:73:27       0|1:81:20       0|0:100:73
+3      106058115       rs6782803       T       C       .       PASS    AA=T;DP=100     GT:GQ:DP        0|1:73:27       1|1:45:16       0|1:100:56
+6      153570701       rs686147        A       C       .       PASS    AA=C;DP=139     GT:GQ:DP        0|1:73:30       1|1:42:22       0|1:100:40
+7      1852700 rs10231456      A       G       .       PASS    AA=N;DP=111     GT:GQ:DP        0|1:73:32       1|1:15:6        0|1:100:72
+5      114444751       rs2921635       A       G       .       PASS    AA=G;DP=148     GT:GQ:DP        0|1:73:32       1|1:63:22       0|1:100:47
+1      57577283        rs1504594       T       C       .       PASS    AA=C;DP=134;HM2 GT:GQ:DP        0|1:73:34       0|1:100:25      0|0:100:73
+6      19968426        rs932346        T       C       .       PASS    AA=C;DP=128     GT:GQ:DP        0|1:73:36       0|1:43:22       0|0:100:68
+2      225670626       .       A       T       .       PASS    AA=T;DP=111     GT:GQ:DP        0|1:74:14       0|1:100:21      0|0:72:25
+8      120710807       rs58361300      T       C       .       PASS    AA=C;DP=100     GT:GQ:DP        0|1:74:17       0|1:100:24      0|0:100:56
+15     52879291        rs2695676       A       T       .       PASS    AA=A;DP=87      GT:GQ:DP        0|1:74:17       0|1:93:17       0|0:100:53
+8      144248344       rs6980822       A       G       .       PASS    AA=A;DP=84      GT:GQ:DP        0|1:74:18       1|1:15:10       0|1:100:55
+5      36206686        rs33668 G       A       .       PASS    AA=A;DP=111     GT:GQ:DP        0|1:74:19       0|1:100:23      0|0:100:71
+12     95704441        rs34462 T       C       .       PASS    AA=C;DP=108     GT:GQ:DP        0|1:74:19       0|1:99:15       0|0:100:76
+13     109935907       rs9521806       G       A       .       PASS    AA=G;DP=114     GT:GQ:DP        0|1:74:22       1|1:43:16       0|1:100:36
+17     37449150        rs1557742       T       C       .       PASS    AA=T;DP=119     GT:GQ:DP        0|1:74:23       0|1:73:15       0|0:100:81
+6      23854378        rs9379564       C       T       .       PASS    AA=T;DP=124     GT:GQ:DP        0|1:74:23       1|1:75:27       0|1:100:72
+17     71054144        .       T       C       .       PASS    AA=T;DP=114     GT:GQ:DP        0|1:74:25       0|0:11:4        0|0:100:87
+1      176180142       rs10913469      T       C       .       PASS    AA=C;DP=116;HM2;HM3     GT:GQ:DP        0|1:74:26       0|1:95:23       0|0:100:67
+8      27849542        rs2685312       G       A       .       PASS    AA=A;DP=116     GT:GQ:DP        0|1:74:27       0|1:41:14       0|0:100:76
+16     67317964        rs9941030       C       A       .       PASS    AA=C;DP=110     GT:GQ:DP        0|1:74:28       0|1:13:20       0|0:100:64
+5      56745509        .       G       A       .       PASS    AA=G;DP=116     GT:GQ:DP        0|1:74:28       0|1:77:23       0|0:100:65
+11     67914548        .       G       A       .       PASS    AA=G;DP=148     GT:GQ:DP        0|1:74:29       0|1:42:12       0|0:100:58
+12     66457770        rs4913365       C       G       .       PASS    AA=N;DP=95      GT:GQ:DP        0|1:74:29       1|1:27:19       0|1:100:48
+20     44889983        rs2868885       T       G       .       PASS    AA=T;DP=132     GT:GQ:DP        0|1:74:34       0|1:84:16       0|0:100:82
+1      58193423        rs1857373       T       G       .       PASS    AA=G;DP=147;HM2;HM3     GT:GQ:DP        0|1:74:35       1|1:47:24       0|1:100:88
+7      99538800        rs999886        A       G       .       PASS    AA=G;DP=136     GT:GQ:DP        0|1:74:45       1|1:12:19       0|1:100:62
+4      42743403        rs7665889       C       T       .       PASS    AA=T;DP=93      GT:GQ:DP        0|1:75:14       0|1:100:26      0|0:100:53
+6      163850561       rs6915247       G       C       .       PASS    AA=C;DP=85      GT:GQ:DP        0|1:75:15       1|1:4:8 0|1:100:63
+19     12387764        rs55990071      C       T       .       PASS    AA=C;DP=89      GT:GQ:DP        0|1:75:17       1|1:21:12       0|1:100:60
+5      16849069        rs253371        T       C       .       PASS    AA=C;DP=73      GT:GQ:DP        0|1:75:18       1|1:17:11       0|1:100:45
+7      17051846        rs6961860       C       T       .       PASS    AA=C;DP=129     GT:GQ:DP        0|1:75:19       0|1:85:22       0|0:100:42
+4      165631870       rs35270004      G       A       .       PASS    AA=G;DP=99      GT:GQ:DP        0|1:75:20       0|1:10:19       0|0:100:60
+16     6720451 .       A       T       .       PASS    AA=T;DP=87      GT:GQ:DP        0|1:75:23       0|1:20:10       0|0:100:55
+11     3085491 rs3741351       T       C       .       PASS    AA=N;DP=101     GT:GQ:DP        0|1:75:28       0|1:96:18       0|0:100:58
+10     54176084        rs11003104      A       C       .       PASS    AA=C;DP=156     GT:GQ:DP        0|1:75:31       0|1:100:22      0|0:100:50
+17     72509262        rs4789399       A       G       .       PASS    AA=a;DP=89      GT:GQ:DP        0|1:75:32       1|1:42:15       0|1:100:44
+21     38618346        rs2836305       T       C       .       PASS    AA=t;DP=107     GT:GQ:DP        0|1:75:33       1|1:27:10       0|1:100:65
+3      73495029        rs1817692       A       G       .       PASS    AA=G;DP=136     GT:GQ:DP        0|1:75:35       1|1:66:24       0|1:100:81
+17     71819607        rs56047430      T       C       .       PASS    AA=C;DP=144     GT:GQ:DP        0|1:75:37       0|1:100:28      0|0:100:81
+9      78521427        .       A       T       .       PASS    AA=A;DP=74      GT:GQ:DP        0|1:76:12       0|1:71:23       0|0:87:31
+6      47811845        rs2026735       G       C       .       PASS    AA=C;DP=114     GT:GQ:DP        0|1:76:15       0|1:100:17      0|0:100:75
+7      121374983       rs1196490       A       G       .       PASS    AA=A;DP=83      GT:GQ:DP        0|1:76:15       1|1:57:20       0|1:100:49
+3      81348738        rs9881186       A       G       .       PASS    AA=G;DP=81      GT:GQ:DP        0|1:76:16       0|0:8:16        0|0:100:48
+13     85716000        rs1939654       T       C       .       PASS    AA=T;DP=93      GT:GQ:DP        0|1:76:19       1|1:57:20       0|1:100:57
+4      112496653       rs2661763       G       A       .       PASS    AA=G;DP=103     GT:GQ:DP        0|1:76:21       0|1:100:23      0|0:100:62
+9      89358626        rs7021866       G       T       .       PASS    AA=G;DP=94      GT:GQ:DP        0|1:76:24       0|1:72:12       0|0:100:62
+5      3068181 rs2927536       A       G       .       PASS    AA=A;DP=133     GT:GQ:DP        0|1:76:25       1|1:19:18       0|1:100:91
+5      158945481       rs11954416      C       A       .       PASS    AA=C;DP=134     GT:GQ:DP        0|1:76:25       1|1:57:20       0|1:100:44
+6      18391768        rs214546        G       C       .       PASS    AA=G;DP=107     GT:GQ:DP        0|1:76:26       1|1:60:22       0|1:100:59
+17     74703643        rs2612807       A       G       .       PASS    AA=G;DP=112     GT:GQ:DP        0|1:76:32       1|1:34:18       0|1:100:63
+1      204150897       rs6669481       T       C       .       PASS    AA=T;DP=126;HM2;HM3     GT:GQ:DP        0|1:76:34       0|1:10:20       0|0:100:72
+4      34746213        rs4414979       T       C       .       PASS    AA=C;DP=84      GT:GQ:DP        0|1:77:13       1|1:39:14       0|1:100:56
+6      119297872       rs62422267      C       G       .       PASS    AA=C;DP=53      GT:GQ:DP        0|1:77:16       0|1:35:6        0|0:78:27
+6      22590374        rs34278238      G       C       .       PASS    AA=G;DP=79      GT:GQ:DP        0|1:77:16       1|1:51:18       0|1:100:44
+7      43324068        rs6463182       C       A       .       PASS    AA=C;DP=100     GT:GQ:DP        0|1:77:16       1|1:51:18       0|1:100:66
+15     31747867        rs2220900       G       A       .       PASS    AA=a;DP=97      GT:GQ:DP        0|1:77:17       0|1:100:17      0|0:100:64
+7      97754398        rs10237583      A       G       .       PASS    AA=a;DP=71      GT:GQ:DP        0|1:77:18       1|1:15:6        0|1:100:35
+5      58734204        rs35519507      C       A       .       PASS    AA=C;DP=73      GT:GQ:DP        0|1:77:20       0|1:84:11       0|0:96:33
+10     62169004        rs1904399       T       C       .       PASS    AA=T;DP=111     GT:GQ:DP        0|1:77:20       1|1:90:32       0|1:100:60
+2      47739431        rs6722724       G       C       .       PASS    AA=g;DP=101     GT:GQ:DP        0|1:77:22       1|1:23:14       0|1:100:66
+15     25278022        rs9672371       G       T       .       PASS    AA=T;DP=108     GT:GQ:DP        0|1:77:23       1|1:27:17       0|1:100:65
+13     44256537        rs7321487       T       A       .       PASS    AA=A;DP=137     GT:GQ:DP        0|1:77:24       0|1:100:31      0|0:100:83
+5      164488486       rs34405444      T       G       .       PASS    AA=T;DP=112     GT:GQ:DP        0|1:77:26       1|1:87:30       0|1:100:58
+16     698189  .       A       T       .       PASS    AA=A;DP=100     GT:GQ:DP        0|1:77:27       0|1:6:11        0|0:100:53
+22     41889681        rs1005658       G       A       .       PASS    AA=G;DP=120     GT:GQ:DP        0|1:77:28       1|1:23:20       0|1:100:71
+8      143636195       .       C       A       .       PASS    AA=C;DP=120     GT:GQ:DP        0|1:77:35       0|1:21:10       0|0:100:72
+17     6347455 rs3809836       T       C       .       PASS    AA=T;DP=104     GT:GQ:DP        0|1:77:39       1|1:48:19       0|1:100:42
+7      130390004       rs12538354      G       A       .       PASS    AA=A;DP=82      GT:GQ:DP        0|1:78:15       0|1:50:7        0|0:100:61
+6      9888402 rs28414356      C       A       .       PASS    AA=c;DP=89      GT:GQ:DP        0|1:78:16       0|1:57:22       0|0:100:51
+2      63041896        rs58171425      C       A       .       PASS    AA=C;DP=102     GT:GQ:DP        0|1:78:19       1|1:18:16       0|1:100:66
+5      120556044       rs17147478      T       G       .       PASS    AA=T;DP=77      GT:GQ:DP        0|1:78:20       0|1:100:17      0|0:100:40
+3      146786734       rs10935570      A       G       .       PASS    AA=G;DP=92      GT:GQ:DP        0|1:78:20       0|1:100:18      0|0:100:54
+13     37509467        rs9285118       C       T       .       PASS    AA=C;DP=103     GT:GQ:DP        0|1:78:20       0|1:100:19      0|0:100:64
+15     46036636        rs2924574       A       C       .       PASS    AA=C;DP=103     GT:GQ:DP        0|1:78:21       0|1:34:22       0|0:100:62
+2      143009947       rs13010316      T       G       .       PASS    AA=T;DP=112     GT:GQ:DP        0|1:78:21       1|1:30:24       0|1:100:62
+10     55764665        rs990205        C       G       .       PASS    AA=C;DP=100     GT:GQ:DP        0|1:78:24       1|1:36:16       0|1:100:63
+9      127853915       rs7031734       A       G       .       PASS    AA=A;DP=111     GT:GQ:DP        0|1:78:27       0|1:54:12       0|0:100:66
+17     77675789        rs6502058       A       C       .       PASS    AA=C;DP=119     GT:GQ:DP        0|1:78:28       1|1:6:21        0|1:100:69
+4      62283018        rs4351047       A       G       .       PASS    AA=A;DP=133     GT:GQ:DP        0|1:78:30       1|1:66:24       0|1:100:74
+13     58735063        rs59483928      T       G       .       PASS    AA=T;DP=128     GT:GQ:DP        0|1:78:31       0|1:100:31      0|0:100:65
+14     62899422        rs12323683      T       C       .       PASS    AA=T;DP=111     GT:GQ:DP        0|1:78:31       0|1:68:19       0|0:100:61
+12     132028165       .       G       C       .       PASS    AA=C;DP=137     GT:GQ:DP        0|1:78:32       0|1:83:18       0|0:100:88
+1      216618910       rs6604607       T       C       .       PASS    AA=T;DP=124;HM2 GT:GQ:DP        0|1:78:34       0|1:83:18       0|0:100:69
+22     44053369        rs8142817       C       G       .       PASS    AA=C;DP=112     GT:GQ:DP        0|1:79:15       1|1:36:14       0|1:100:39
+5      112340427       rs33556 T       C       .       PASS    AA=T;DP=70      GT:GQ:DP        0|1:79:17       0|0:8:5 0|0:85:40
+7      90825937        rs6957957       T       C       .       PASS    AA=T;DP=111     GT:GQ:DP        0|1:79:25       0|1:90:13       0|0:100:70
+2      187216217       rs1448424       C       T       .       PASS    AA=T;DP=116     GT:GQ:DP        0|1:79:25       1|1:51:19       0|1:100:65
+1      74638773        rs699837        C       T       .       PASS    AA=C;DP=112;HM2 GT:GQ:DP        0|1:79:27       1|1:19:18       0|1:100:67
+3      136524145       rs4271939       T       C       .       PASS    AA=T;DP=145     GT:GQ:DP        0|1:79:29       0|1:87:25       0|0:100:92
+22     45110992        .       G       C       .       PASS    AA=G;DP=110     GT:GQ:DP        0|1:79:30       0|1:6:9 0|0:100:57
+1      150156612       rs6659029       C       T       .       PASS    AA=T;DP=109;HM3 GT:GQ:DP        0|1:79:30       1|1:28:15       0|1:100:59
+1      112099005       rs197388        A       T       .       PASS    AA=T;DP=134;HM2 GT:GQ:DP        0|1:79:31       0|1:41:25       0|0:100:36
+16     83006122        rs12446219      T       C       .       PASS    AA=C;DP=121     GT:GQ:DP        0|1:79:31       0|1:63:15       0|0:100:78
+6      737284  rs6597265       C       T       .       PASS    AA=T;DP=142     GT:GQ:DP        0|1:79:35       0|1:99:18       0|0:100:86
+4      170328138       rs7664461       C       T       .       PASS    AA=c;DP=101     GT:GQ:DP        0|1:80:19       0|1:88:18       0|0:100:64
+8      3567490 rs7837830       G       A       .       PASS    AA=A;DP=112     GT:GQ:DP        0|1:80:19       1|1:42:17       0|1:100:76
+21     18242313        rs693881        A       G       .       PASS    AA=A;DP=118     GT:GQ:DP        0|1:80:20       0|1:100:23      0|0:90:31
+11     26004028        rs11029100      A       G       .       PASS    AA=A;DP=81      GT:GQ:DP        0|1:80:21       1|1:33:18       0|1:100:42
+1      100821900       rs1577515       G       C       .       PASS    AA=G;DP=103;HM2 GT:GQ:DP        0|1:80:23       0|1:100:19      0|0:100:62
+2      200199544       rs13419888      A       G       .       PASS    AA=a;DP=81      GT:GQ:DP        0|1:80:23       1|1:7:13        0|1:100:44
+4      95231707        rs1904096       C       A       .       PASS    AA=A;DP=99      GT:GQ:DP        0|1:80:24       1|1:10:15       0|1:100:56
+9      81179965        rs4273931       A       G       .       PASS    AA=G;DP=83      GT:GQ:DP        0|1:80:24       1|1:23:26       0|1:100:29
+4      66205744        rs11131608      G       A       .       PASS    AA=A;DP=104     GT:GQ:DP        0|1:80:24       1|1:36:13       0|1:100:68
+10     126467396       rs1552345       A       G       .       PASS    AA=G;DP=96      GT:GQ:DP        0|1:80:24       1|1:45:17       0|1:100:56
+18     63834611        rs1878654       G       A       .       PASS    AA=A;DP=85      GT:GQ:DP        0|1:80:25       1|1:39:14       0|1:100:35
+6      91425059        rs6918231       G       A       .       PASS    AA=G;DP=128     GT:GQ:DP        0|1:80:26       0|1:100:28      0|0:100:66
+7      100130766       rs221784        A       G       .       PASS    AA=G;DP=93      GT:GQ:DP        0|1:80:28       1|1:45:17       0|1:100:38
+8      14941035        rs1598190       A       C       .       PASS    AA=C;DP=131     GT:GQ:DP        0|1:80:28       1|1:81:28       0|1:100:32
+4      122271465       rs1511094       A       C       .       PASS    AA=C;DP=116     GT:GQ:DP        0|1:80:29       0|1:100:25      0|0:100:61
+1      166688995       .       A       G       .       PASS    AA=A;DP=101     GT:GQ:DP        0|1:80:30       0|1:71:12       0|0:100:60
+19     32480381        .       T       A       .       PASS    AA=.;DP=156     GT:GQ:DP        0|1:80:31       0|1:59:39       0|0:7:79
+6      106060417       rs9486131       T       C       .       PASS    AA=T;DP=151     GT:GQ:DP        0|1:80:36       0|1:100:19      0|0:100:54
+16     23281597        rs13333693      A       G       .       PASS    AA=A;DP=117     GT:GQ:DP        0|1:80:36       1|1:38:14       0|1:100:68
+1      109855813       rs12066164      A       G       .       PASS    AA=A;DP=162;HM3 GT:GQ:DP        0|1:80:40       0|1:95:25       0|0:100:98
+4      27164413        rs10939166      G       T       .       PASS    AA=T;DP=82      GT:GQ:DP        0|1:81:12       1|1:21:8        0|1:100:61
+20     23535063        rs35701829      G       A       .       PASS    AA=g;DP=72      GT:GQ:DP        0|1:81:16       1|1:15:6        0|1:100:49
+19     17645221        rs10403209      T       G       .       PASS    AA=G;DP=60      GT:GQ:DP        0|1:81:17       1|1:12:6        0|1:100:41
+22     30282166        .       A       G       .       PASS    AA=A;DP=102     GT:GQ:DP        0|1:81:20       0|1:100:25      0|0:100:61
+6      32799257        rs9275856       A       C       .       PASS    AA=N;DP=82      GT:GQ:DP        0|1:81:20       0|1:84:12       0|0:100:48
+18     63243551        rs4891614       T       A       .       PASS    AA=N;DP=98      GT:GQ:DP        0|1:81:20       1|1:23:24       0|1:82:55
+7      30568402        rs11981518      G       A       .       PASS    AA=g;DP=115     GT:GQ:DP        0|1:81:21       1|1:48:18       0|1:100:76
+5      10606563        rs2062462       A       G       .       PASS    AA=G;DP=139     GT:GQ:DP        0|1:81:24       0|1:100:22      0|0:100:48
+3      151254481       .       G       A       .       PASS    AA=g;DP=109     GT:GQ:DP        0|1:81:24       0|1:63:18       0|0:100:68
+6      95406190        rs4706455       A       G       .       PASS    AA=G;DP=112     GT:GQ:DP        0|1:81:26       0|1:58:19       0|0:100:65
+7      81810284        rs7784888       A       G       .       PASS    AA=A;DP=113     GT:GQ:DP        0|1:81:29       0|1:86:25       0|0:100:60
+20     30279411        rs6141641       T       C       .       PASS    AA=t;DP=120     GT:GQ:DP        0|1:81:29       1|1:45:17       0|1:100:72
+5      7846739 rs2388802       C       T       .       PASS    AA=C;DP=132     GT:GQ:DP        0|1:81:29       1|1:79:34       0|1:100:69
+12     67928950        rs10878947      A       T       .       PASS    AA=T;DP=67      GT:GQ:DP        0|1:82:11       1|1:60:21       0|1:100:24
+1      75562929        rs1249657       C       T       .       PASS    AA=T;DP=92;HM2;HM3      GT:GQ:DP        0|1:82:16       1|1:44:19       0|1:100:45
+6      5849790 rs10155695      T       C       .       PASS    AA=T;DP=106     GT:GQ:DP        0|1:82:16       1|1:69:24       0|1:100:64
+7      11368760        .       A       T       .       PASS    AA=A;DP=62      GT:GQ:DP        0|1:82:17       0|1:77:12       0|0:69:24
+9      31528024        .       A       C       .       PASS    AA=A;DP=108     GT:GQ:DP        0|1:82:18       0|1:100:27      0|0:100:60
+3      75242292        rs4677462       C       T       .       PASS    AA=T;DP=85      GT:GQ:DP        0|1:82:21       0|1:77:15       0|0:100:53
+19     57304857        rs28411159      C       T       .       PASS    AA=T;DP=89      GT:GQ:DP        0|1:82:23       0|0:5:15        0|0:100:52
+8      39568956        rs62511873      T       G       .       PASS    AA=T;DP=103     GT:GQ:DP        0|1:82:23       1|1:31:18       0|1:100:62
+16     83050533        rs3743654       C       T       .       PASS    AA=C;DP=105     GT:GQ:DP        0|1:82:24       0|1:100:12      0|0:100:69
+4      54609622        rs2049170       T       C       .       PASS    AA=C;DP=114     GT:GQ:DP        0|1:82:25       1|1:51:19       0|1:100:72
+2      138142850       rs10176739      A       T       .       PASS    AA=A;DP=106     GT:GQ:DP        0|1:82:26       0|0:5:22        0|0:100:60
+14     91939396        rs11626106      T       C       .       PASS    AA=T;DP=141     GT:GQ:DP        0|1:82:34       1|1:66:25       0|1:100:83
+5      91919409        rs6893562       C       T       .       PASS    AA=C;DP=113     GT:GQ:DP        0|1:83:13       0|1:54:15       0|0:100:84
+3      193196012       rs2458485       A       T       .       PASS    AA=A;DP=66      GT:GQ:DP        0|1:83:13       1|1:10:10       0|1:100:35
+11     102852310       rs11225826      T       C       .       PASS    AA=T;DP=99      GT:GQ:DP        0|1:83:14       1|1:44:27       0|1:100:59
+18     32178879        rs1996141       T       C       .       PASS    AA=C;DP=97      GT:GQ:DP        0|1:83:15       0|1:92:19       0|0:100:58
+9      9406962 rs1333111       A       G       .       PASS    AA=A;DP=98      GT:GQ:DP        0|1:83:16       1|1:51:20       0|1:100:62
+8      85871680        rs1427052       T       C       .       PASS    AA=T;DP=114     GT:GQ:DP        0|1:83:19       0|1:100:26      0|0:100:66
+10     70429186        rs2245565       T       G       .       PASS    AA=t;DP=84      GT:GQ:DP        0|1:83:20       1|1:24:9        0|1:100:56
+12     36687131        rs12372536      C       G       .       PASS    AA=.;DP=94      GT:GQ:DP        0|1:83:22       0|1:76:23       0|0:100:49
+4      173117821       rs332971        G       C       .       PASS    AA=G;DP=101     GT:GQ:DP        0|1:83:23       1|1:45:18       0|1:100:62
+6      161239925       rs2489959       T       C       .       PASS    AA=C;DP=116     GT:GQ:DP        0|1:83:25       1|1:45:17       0|1:100:75
+10     67254000        .       A       C       .       PASS    AA=C;DP=124     GT:GQ:DP        0|1:83:25       1|1:51:23       0|1:100:80
+5      76508831        rs6890018       A       C       .       PASS    AA=A;DP=127     GT:GQ:DP        0|1:83:26       0|1:100:24      0|0:100:79
+5      130158094       rs7724716       T       C       .       PASS    AA=t;DP=94      GT:GQ:DP        0|1:83:26       0|1:80:14       0|0:100:55
+5      84401554        rs10068261      T       C       .       PASS    AA=C;DP=132     GT:GQ:DP        0|1:83:27       0|1:75:23       0|0:100:81
+10     130117814       rs10829401      G       T       .       PASS    AA=G;DP=115     GT:GQ:DP        0|1:83:27       1|1:42:16       0|1:100:72
+3      186790763       rs11916386      G       T       .       PASS    AA=G;DP=89      GT:GQ:DP        0|1:83:27       1|1:6:12        0|1:100:50
+3      160395606       .       A       T       .       PASS    AA=A;DP=114     GT:GQ:DP        0|1:83:28       0|1:96:21       0|0:100:66
+8      18137713        rs10102201      T       C       .       PASS    AA=.;DP=105     GT:GQ:DP        0|1:83:31       1|1:46:23       0|1:100:51
+16     4296378 rs17136969      G       C       .       PASS    AA=G;DP=114     GT:GQ:DP        0|1:83:32       0|1:49:22       0|0:100:58
+11     127855863       rs7108562       T       C       .       PASS    AA=T;DP=120     GT:GQ:DP        0|1:83:34       1|1:51:19       0|1:100:69
+6      48198928        rs9473251       C       T       .       PASS    AA=T;DP=100     GT:GQ:DP        0|1:84:14       1|1:54:19       0|1:100:64
+22     32772940        rs408446        C       T       .       PASS    AA=C;DP=90      GT:GQ:DP        0|1:84:15       1|1:39:15       0|1:100:60
+7      13600800        rs6960309       G       T       .       PASS    AA=G;DP=77      GT:GQ:DP        0|1:84:15       1|1:7:10        0|1:100:55
+19     23634452        rs8100161       G       A       .       PASS    AA=A;DP=102     GT:GQ:DP        0|1:84:19       1|1:75:26       0|1:100:60
+5      3033652 rs10475189      T       C       .       PASS    AA=C;DP=104     GT:GQ:DP        0|1:84:20       1|1:44:20       0|1:100:59
+11     84292354        rs11234235      T       C       .       PASS    AA=t;DP=108     GT:GQ:DP        0|1:84:20       1|1:78:27       0|1:100:59
+7      1916911 rs10243920      G       A       .       PASS    AA=G;DP=105     GT:GQ:DP        0|1:84:22       0|1:11:16       0|0:100:54
+7      1766384 .       G       T       .       PASS    AA=G;DP=110     GT:GQ:DP        0|1:84:24       0|1:9:18        0|0:100:67
+1      200638256       rs2843411       C       A       .       PASS    AA=A;DP=117;HM2;HM3     GT:GQ:DP        0|1:84:24       1|1:57:20       0|1:100:71
+8      34539586        .       C       T       .       PASS    AA=C;DP=128     GT:GQ:DP        0|1:84:26       0|1:95:29       0|0:100:72
+4      74948470        rs12643330      T       C       .       PASS    AA=C;DP=130     GT:GQ:DP        0|1:84:27       0|1:100:21      0|0:100:81
+14     24559123        rs1062229       C       T       .       PASS    AA=T;DP=153     GT:GQ:DP        0|1:84:28       0|1:100:37      0|0:100:44
+13     111952288       .       G       A       .       PASS    AA=G;DP=124     GT:GQ:DP        0|1:84:30       0|1:100:24      0|0:100:70
+14     60693654        rs10134737      A       G       .       PASS    AA=G;DP=157     GT:GQ:DP        0|1:84:32       0|1:96:23       0|0:100:60
+18     67729384        rs2367670       T       C       .       PASS    AA=T;DP=80      GT:GQ:DP        0|1:85:16       1|1:23:14       0|1:100:50
+5      77666054        rs4704501       T       C       .       PASS    AA=C;DP=99      GT:GQ:DP        0|1:85:16       1|1:24:15       0|1:100:62
+8      39950114        rs1468962       C       T       .       PASS    AA=T;DP=93      GT:GQ:DP        0|1:85:17       0|1:100:17      0|0:100:59
+9      138138963       .       G       T       .       PASS    AA=G;DP=59      GT:GQ:DP        0|1:85:17       1|1:12:5        0|1:100:26
+18     22466470        rs11660653      T       G       .       PASS    AA=T;DP=106     GT:GQ:DP        0|1:85:18       0|1:60:18       0|0:100:70
+4      175606106       .       A       C       .       PASS    AA=A;DP=96      GT:GQ:DP        0|1:85:18       0|1:81:16       0|0:100:57
+21     29186830        rs2142372       T       C       .       PASS    AA=C;DP=94      GT:GQ:DP        0|1:85:19       0|1:42:17       0|0:100:58
+4      3846618 rs28612119      A       T       .       PASS    AA=.;DP=111     GT:GQ:DP        0|1:85:19       1|1:54:22       0|1:100:70
+2      171427229       rs45609237      G       C       .       PASS    AA=C;DP=96      GT:GQ:DP        0|1:85:20       0|1:100:23      0|0:100:52
+13     89614599        rs1602420       T       C       .       PASS    AA=C;DP=116     GT:GQ:DP        0|1:85:21       1|1:37:34       0|1:100:63
+2      141100430       rs484862        A       G       .       PASS    AA=A;DP=82      GT:GQ:DP        0|1:85:21       1|1:45:17       0|1:100:43
+21     43562311        rs638268        G       A       .       PASS    AA=G;DP=109     GT:GQ:DP        0|1:85:22       1|1:33:14       0|1:100:67
+1      83112898        rs876339        C       T       .       PASS    AA=T;DP=111;HM2;HM3     GT:GQ:DP        0|1:85:22       1|1:75:27       0|1:100:63
+4      159906834       rs35350460      A       G       .       PASS    AA=A;DP=100     GT:GQ:DP        0|1:85:23       0|1:100:23      0|0:100:42
+14     58470492        rs6573230       A       G       .       PASS    AA=A;DP=102     GT:GQ:DP        0|1:85:26       0|1:84:23       0|0:100:56
+8      144311234       rs10109061      A       G       .       PASS    AA=G;DP=132     GT:GQ:DP        0|1:85:29       1|1:51:18       0|1:100:35
+6      42547740        rs9471871       T       C       .       PASS    AA=C;DP=123     GT:GQ:DP        0|1:85:35       1|1:72:25       0|1:100:63
+11     28746200        rs4028106       A       G       .       PASS    AA=A;DP=107     GT:GQ:DP        0|1:86:11       1|1:35:15       0|1:100:81
+15     38026769        rs2917836       A       G       .       PASS    AA=A;DP=89      GT:GQ:DP        0|1:86:15       1|1:39:14       0|1:100:20
+11     29665098        .       C       G       .       PASS    AA=C;DP=88      GT:GQ:DP        0|1:86:17       1|1:57:22       0|1:100:50
+11     103855073       rs1487692       G       A       .       PASS    AA=G;DP=67      GT:GQ:DP        0|1:86:18       1|1:45:16       0|1:100:22
+20     14442119        rs436322        G       A       .       PASS    AA=A;DP=82      GT:GQ:DP        0|1:86:19       0|1:100:17      0|0:100:45
+2      146589697       rs12691735      T       C       .       PASS    AA=C;DP=124     GT:GQ:DP        0|1:86:20       1|1:63:24       0|1:100:79
+12     20822477        rs10770729      C       G       .       PASS    AA=G;DP=112     GT:GQ:DP        0|1:86:21       1|1:13:16       0|1:100:74
+2      20243337        rs6531219       G       C       .       PASS    AA=C;DP=104     GT:GQ:DP        0|1:86:21       1|1:30:11       0|1:100:74
+11     62122195        rs11231155      A       G       .       PASS    AA=G;DP=126     GT:GQ:DP        0|1:86:23       0|1:100:29      0|0:100:79
+18     36240862        rs9947240       G       T       .       PASS    AA=G;DP=120     GT:GQ:DP        0|1:86:23       1|1:31:22       0|1:100:35
+5      174157694       rs11949674      G       A       .       PASS    AA=A;DP=94      GT:GQ:DP        0|1:86:24       0|1:41:21       0|0:100:51
+15     93670968        rs12593526      T       C       .       PASS    AA=C;DP=79      GT:GQ:DP        0|1:86:24       1|1:9:14        0|1:100:29
+14     31637986        .       C       T       .       PASS    AA=T;DP=120     GT:GQ:DP        0|1:86:25       0|1:100:24      0|0:100:72
+3      168646663       rs7615516       G       A       .       PASS    AA=A;DP=120     GT:GQ:DP        0|1:86:25       0|1:100:33      0|0:100:61
+5      172170884       rs2448017       C       G       .       PASS    AA=C;DP=93      GT:GQ:DP        0|1:86:25       1|1:23:16       0|1:100:53
+14     62139572        rs8006592       C       A       .       PASS    AA=A;DP=97      GT:GQ:DP        0|1:86:25       1|1:60:21       0|1:100:47
+6      149157435       rs4897049       T       G       .       PASS    AA=G;DP=152     GT:GQ:DP        0|1:86:28       0|1:100:34      0|0:100:90
+18     8969589 rs11081449      A       G       .       PASS    AA=A;DP=109     GT:GQ:DP        0|1:86:29       0|1:100:18      0|0:100:63
+5      154555131       rs55877838      C       T       .       PASS    AA=C;DP=150     GT:GQ:DP        0|1:86:29       0|1:100:35      0|0:100:46
+8      53853554        rs4873221       A       G       .       PASS    AA=G;DP=133     GT:GQ:DP        0|1:86:30       0|1:72:22       0|0:100:77
+14     22111358        rs34309148      G       A       .       PASS    AA=G;DP=125     GT:GQ:DP        0|1:86:30       1|1:78:28       0|1:100:71
+19     8801790 .       A       C       .       PASS    AA=A;DP=158     GT:GQ:DP        0|1:86:32       0|1:91:26       0|0:100:51
+22     35042756        rs1557536       C       G       .       PASS    AA=C;DP=145     GT:GQ:DP        0|1:86:34       0|1:28:22       0|0:100:51
+18     70094313        .       A       G       .       PASS    AA=A;DP=120     GT:GQ:DP        0|1:86:35       0|1:39:13       0|0:100:70
+12     45022996        rs12317787      T       C       .       PASS    AA=t;DP=126     GT:GQ:DP        0|1:86:35       0|1:69:20       0|0:100:71
+22     34895526        .       C       T       .       PASS    AA=.;DP=80      GT:GQ:DP        0|1:87:12       0|1:37:18       0|0:100:49
+8      90261052        rs318246        A       G       .       PASS    AA=A;DP=95      GT:GQ:DP        0|1:87:15       0|1:47:19       0|0:100:61
+9      20025279        rs9792640       A       G       .       PASS    AA=A;DP=110     GT:GQ:DP        0|1:87:16       0|1:100:19      0|0:87:30
+17     66397737        rs56065013      T       C       .       PASS    AA=T;DP=86      GT:GQ:DP        0|1:87:19       0|1:100:18      0|0:100:49
+12     20683079        rs4762977       C       T       .       PASS    AA=T;DP=91      GT:GQ:DP        0|1:87:19       0|1:100:24      0|0:100:49
+5      80347739        rs509741        G       A       .       PASS    AA=A;DP=124     GT:GQ:DP        0|1:87:19       0|1:71:23       0|0:100:70
+12     65816780        rs1918140       A       G       .       PASS    AA=A;DP=83      GT:GQ:DP        0|1:87:19       1|1:45:16       0|1:100:49
+2      131229320       rs2625051       C       T       .       PASS    AA=.;DP=88      GT:GQ:DP        0|1:87:21       1|1:34:14       0|1:100:53
+8      3583076 rs2720825       C       T       .       PASS    AA=T;DP=70      GT:GQ:DP        0|1:87:21       1|1:51:18       0|1:100:27
+22     17516722        rs5993542       G       A       .       PASS    AA=G;DP=73      GT:GQ:DP        0|1:87:23       0|0:23:8        0|0:63:31
+9      107938763       .       T       C       .       PASS    AA=T;DP=119     GT:GQ:DP        0|1:87:23       0|1:100:24      0|0:100:74
+6      17942307        rs4716192       G       A       .       PASS    AA=G;DP=87      GT:GQ:DP        0|1:87:23       0|1:96:19       0|0:100:45
+6      35841756        rs2817055       G       C       .       PASS    AA=C;DP=93      GT:GQ:DP        0|1:87:23       1|1:35:20       0|1:100:38
+5      24711905        .       C       T       .       PASS    AA=C;DP=94      GT:GQ:DP        0|1:87:24       0|1:43:20       0|0:100:49
+10     29194458        rs4749355       A       G       .       PASS    AA=A;DP=143     GT:GQ:DP        0|1:87:27       0|1:74:28       0|0:100:88
+13     49754097        rs806342        A       C       .       PASS    AA=A;DP=124     GT:GQ:DP        0|1:87:27       1|1:72:25       0|1:100:69
+2      231173973       .       C       T       .       PASS    AA=c;DP=120     GT:GQ:DP        0|1:87:28       0|1:82:24       0|0:100:70
+7      156045098       rs13236262      C       A       .       PASS    AA=a;DP=129     GT:GQ:DP        0|1:87:34       0|1:86:23       0|0:100:75
+3      75876746        .       C       T       .       PASS    AA=c;DP=183     GT:GQ:DP        0|1:87:38       0|1:55:36       0|0:55:86
+1      197338804       rs2117335       T       C       .       PASS    AA=T;DP=106;HM3 GT:GQ:DP        0|1:88:13       0|1:100:22      0|0:100:71
+9      112844933       .       T       G       .       PASS    AA=T;DP=77      GT:GQ:DP        0|1:88:13       1|1:42:15       0|1:100:51
+11     7859140 rs10769844      T       G       .       PASS    AA=A;DP=66      GT:GQ:DP        0|1:88:18       0|1:33:12       0|0:78:27
+4      109828758       rs2851356       T       G       .       PASS    AA=G;DP=115     GT:GQ:DP        0|1:88:21       0|1:100:21      0|0:100:67
+6      52925103        rs568644        A       G       .       PASS    AA=A;DP=124     GT:GQ:DP        0|1:88:21       0|1:72:20       0|0:100:40
+15     88239299        rs10459674      G       C       .       PASS    AA=C;DP=98      GT:GQ:DP        0|1:88:21       0|1:94:16       0|0:100:63
+3      193073935       rs36020108      A       C       .       PASS    AA=a;DP=102     GT:GQ:DP        0|1:88:22       0|1:100:24      0|0:100:57
+10     118185315       .       A       T       .       PASS    AA=t;DP=120     GT:GQ:DP        0|1:88:23       0|1:100:27      0|0:100:72
+6      77537444        rs1580199       C       T       .       PASS    AA=c;DP=95      GT:GQ:DP        0|1:88:23       1|1:16:17       0|1:100:57
+2      105185443       rs34042919      T       C       .       PASS    AA=-;DP=101     GT:GQ:DP        0|1:88:23       1|1:57:20       0|1:100:57
+2      55439299        rs2864828       A       C       .       PASS    AA=a;DP=84      GT:GQ:DP        0|1:88:24       1|1:25:15       0|1:100:46
+7      30141714        .       T       C       .       PASS    AA=N;DP=70      GT:GQ:DP        0|1:88:25       0|0:8:5 0|0:74:41
+1      145022950       rs4528168       G       C       .       PASS    AA=C;DP=108     GT:GQ:DP        0|1:88:25       1|1:35:19       0|1:100:63
+8      14133376        rs34293153      T       C       .       PASS    AA=T;DP=87      GT:GQ:DP        0|1:88:25       1|1:63:23       0|1:100:29
+8      9398809 rs36029604      C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        0|1:88:26       0|1:90:28       0|0:100:66
+12     96335194        rs4762387       T       C       .       PASS    AA=C;DP=111     GT:GQ:DP        0|1:88:26       1|1:13:14       0|1:100:70
+7      144067980       rs55947654      T       C       .       PASS    AA=C;DP=134     GT:GQ:DP        0|1:88:27       0|1:77:29       0|0:100:79
+19     59835264        rs1061680       T       C       .       PASS    AA=C;DP=127     GT:GQ:DP        0|1:88:32       1|1:36:13       0|1:100:40
+10     24683247        rs739572        T       C       .       PASS    AA=C;DP=108     GT:GQ:DP        0|1:88:32       1|1:54:19       0|1:100:56
+1      37095025        .       A       G       .       PASS    AA=G;DP=126     GT:GQ:DP        0|1:88:33       0|1:27:16       0|0:100:78
+1      116156094       rs950369        A       G       .       PASS    AA=G;DP=137;HM2;HM3     GT:GQ:DP        0|1:88:34       1|1:66:23       0|1:100:83
+7      155925075       rs13242381      A       C       .       PASS    AA=C;DP=131     GT:GQ:DP        0|1:88:38       1|1:5:14        0|1:100:79
+13     92508995        rs507406        G       A       .       PASS    AA=A;DP=102     GT:GQ:DP        0|1:89:14       0|1:100:28      0|0:100:61
+20     8107405 rs6055597       C       T       .       PASS    AA=T;DP=87      GT:GQ:DP        0|1:89:17       1|1:18:13       0|1:100:59
+6      55255656        rs2653351       A       T       .       PASS    AA=A;DP=66      GT:GQ:DP        0|1:89:18       1|1:20:16       0|1:100:22
+7      23930432        rs2059449       G       A       .       PASS    AA=A;DP=102     GT:GQ:DP        0|1:89:18       1|1:75:26       0|1:100:58
+2      203083050       rs7562876       C       T       .       PASS    AA=T;DP=92      GT:GQ:DP        0|1:89:20       1|1:20:16       0|1:100:59
+2      158713092       rs13031798      T       G       .       PASS    AA=N;DP=94      GT:GQ:DP        0|1:89:20       1|1:21:13       0|1:100:61
+2      76668487        .       A       G       .       PASS    AA=A;DP=95      GT:GQ:DP        0|1:89:23       0|1:100:18      0|0:100:60
+16     83878078        rs4783156       T       C       .       PASS    AA=C;DP=84      GT:GQ:DP        0|1:89:23       1|1:39:14       0|1:100:47
+8      124497854       .       C       T       .       PASS    AA=C;DP=74      GT:GQ:DP        0|1:89:24       0|0:20:5        0|0:100:36
+1      171642620       rs6671832       C       T       .       PASS    AA=T;DP=115;HM2;HM3     GT:GQ:DP        0|1:89:24       1|1:48:19       0|1:100:72
+7      153804171       rs10252777      T       C       .       PASS    AA=C;DP=122     GT:GQ:DP        0|1:89:26       0|1:75:20       0|0:100:38
+4      155934179       .       A       C       .       PASS    AA=A;DP=123     GT:GQ:DP        0|1:89:28       0|1:95:25       0|0:100:70
+9      131987403       rs3901424       T       C       .       PASS    AA=C;DP=154     GT:GQ:DP        0|1:89:29       0|1:55:16       0|0:100:57
+6      42983443        rs9296401       T       C       .       PASS    AA=C;DP=125     GT:GQ:DP        0|1:89:30       1|1:48:18       0|1:100:80
+10     53128053        rs3740228       A       G       .       PASS    AA=G;DP=138     GT:GQ:DP        0|1:89:32       1|1:60:21       0|1:100:85
+5      116249370       rs712613        A       G       .       PASS    AA=a;DP=144     GT:GQ:DP        0|1:89:33       1|1:72:26       0|1:100:44
+10     26690576        rs10828978      T       C       .       PASS    AA=T;DP=167     GT:GQ:DP        0|1:89:35       0|1:100:30      0|0:100:38
+2      39898492        rs6718749       C       G       .       PASS    AA=C;DP=154     GT:GQ:DP        0|1:89:36       1|1:100:36      0|1:100:82
+21     20050184        rs2825782       T       C       .       PASS    AA=T;DP=84      GT:GQ:DP        0|1:8:15        1|1:57:20       0|1:100:49
+22     17276429        rs5747925       T       C       .       PASS    AA=.;DP=56      GT:GQ:DP        0|1:8:18        1|1:5:3 0|1:100:32
+1      31344150        .       A       G       .       PASS    AA=N;DP=88      GT:GQ:DP        0|1:90:17       1|1:30:12       0|1:100:49
+8      137991878       rs1827139       G       A       .       PASS    AA=G;DP=96      GT:GQ:DP        0|1:90:20       1|1:55:23       0|1:100:53
+19     18360784        rs1055150       C       G       .       PASS    AA=C;DP=91      GT:GQ:DP        0|1:90:21       0|1:52:12       0|0:100:55
+2      1522397 rs4927631       A       G       .       PASS    AA=G;DP=80      GT:GQ:DP        0|1:90:21       1|1:15:6        0|1:100:55
+9      9259284 rs4363255       C       T       .       PASS    AA=T;DP=103     GT:GQ:DP        0|1:90:21       1|1:60:21       0|1:100:64
+17     2629128 rs12600878      A       G       .       PASS    AA=a;DP=128     GT:GQ:DP        0|1:90:22       0|1:39:15       0|0:100:52
+12     124773911       rs2190489       G       A       .       PASS    AA=G;DP=117     GT:GQ:DP        0|1:90:24       0|1:100:22      0|0:100:74
+18     29335121        rs4146470       T       C       .       PASS    AA=T;DP=111     GT:GQ:DP        0|1:90:25       1|1:60:22       0|1:100:64
+17     75351696        rs9916606       C       G       .       PASS    AA=G;DP=107     GT:GQ:DP        0|1:90:26       0|1:28:13       0|0:100:64
+6      110599257       rs6568633       T       C       .       PASS    AA=C;DP=92      GT:GQ:DP        0|1:90:27       1|1:54:19       0|1:100:33
+14     91877083        rs11160059      T       C       .       PASS    AA=C;DP=111     GT:GQ:DP        0|1:90:29       1|1:54:19       0|1:100:63
+11     109083484       rs1790926       C       G       .       PASS    AA=C;DP=127     GT:GQ:DP        0|1:90:30       1|1:51:19       0|1:100:65
+5      65001513        rs27394 G       A       .       PASS    AA=A;DP=110     GT:GQ:DP        0|1:90:30       1|1:84:29       0|1:100:53
+17     51451433        rs1560467       G       A       .       PASS    AA=C;DP=125     GT:GQ:DP        0|1:90:31       0|1:72:17       0|0:100:38
+12     130740731       rs4964907       T       C       .       PASS    AA=.;DP=123     GT:GQ:DP        0|1:90:32       1|1:36:23       0|1:100:68
+10     3920424 rs10795088      A       G       .       PASS    AA=A;DP=137     GT:GQ:DP        0|1:90:32       1|1:60:22       0|1:100:83
+9      33376064        .       C       G       .       PASS    AA=.;DP=147     GT:GQ:DP        0|1:90:39       0|1:48:17       0|0:4:89
+13     61146574        rs1417470       C       T       .       PASS    AA=T;DP=86      GT:GQ:DP        0|1:90:9        1|1:63:22       0|1:100:53
+19     22534698        rs9305000       G       A       .       PASS    AA=g;DP=120     GT:GQ:DP        0|1:91:15       1|1:81:28       0|1:100:74
+12     131407027       rs28455494      A       G       .       PASS    AA=a;DP=66      GT:GQ:DP        0|1:91:16       0|0:21:10       0|0:93:32
+9      75195077        .       G       T       .       PASS    AA=G;DP=108     GT:GQ:DP        0|1:91:16       1|1:63:22       0|1:100:70
+9      31587702        rs10970434      C       T       .       PASS    AA=C;DP=66      GT:GQ:DP        0|1:91:20       1|1:21:8        0|1:100:34
+10     54584576        rs2891432       A       G       .       PASS    AA=G;DP=110     GT:GQ:DP        0|1:91:20       1|1:60:23       0|1:100:69
+6      50078724        rs9473711       A       G       .       PASS    AA=A;DP=88      GT:GQ:DP        0|1:91:21       0|1:100:19      0|0:100:48
+1      185656887       rs4570380       A       G       .       PASS    AA=G;DP=128     GT:GQ:DP        0|1:91:21       0|1:71:24       0|0:100:83
+8      114817975       rs986599        G       A       .       PASS    AA=G;DP=101     GT:GQ:DP        0|1:91:21       1|1:54:19       0|1:100:60
+5      2706463 rs6555118       C       G       .       PASS    AA=G;DP=121     GT:GQ:DP        0|1:91:21       1|1:63:22       0|1:100:72
+8      24719999        rs17052675      A       G       .       PASS    AA=A;DP=108     GT:GQ:DP        0|1:91:22       0|1:79:25       0|0:100:61
+5      95847193        rs2125793       T       C       .       PASS    AA=C;DP=114     GT:GQ:DP        0|1:91:25       1|1:54:20       0|1:100:72
+6      2406566 rs17135071      T       C       .       PASS    AA=T;DP=151     GT:GQ:DP        0|1:91:26       0|1:88:18       0|0:100:65
+15     27657265        rs4779664       T       C       .       PASS    AA=C;DP=116     GT:GQ:DP        0|1:91:26       1|1:30:18       0|1:100:70
+7      137586482       rs4031401       T       C       .       PASS    AA=C;DP=139     GT:GQ:DP        0|1:91:27       0|1:69:28       0|0:100:46
+15     34113019        rs12438799      T       C       .       PASS    AA=C;DP=114     GT:GQ:DP        0|1:91:27       0|1:83:21       0|0:100:64
+7      97829061        rs6965424       A       G       .       PASS    AA=G;DP=79      GT:GQ:DP        0|1:91:27       1|1:15:10       0|1:100:31
+5      164303448       rs6556787       T       G       .       PASS    AA=T;DP=122     GT:GQ:DP        0|1:91:28       0|1:100:31      0|0:100:64
+19     2451459 rs16991183      A       C       .       PASS    AA=A;DP=125     GT:GQ:DP        0|1:91:28       1|1:13:15       0|1:100:82
+1      226157904       .       G       T       .       PASS    AA=G;DP=107     GT:GQ:DP        0|1:91:29       0|1:25:11       0|0:100:70
+6      164239825       rs9295247       A       G       .       PASS    AA=G;DP=107     GT:GQ:DP        0|1:91:29       0|1:71:17       0|0:100:61
+12     5820026 .       T       G       .       PASS    AA=T;DP=142     GT:GQ:DP        0|1:91:29       0|1:90:19       0|0:100:47
+10     16589819        rs34743968      T       C       .       PASS    AA=T;DP=126     GT:GQ:DP        0|1:91:30       0|1:100:24      0|0:100:75
+18     61602950        rs10503102      G       A       .       PASS    AA=G;DP=135     GT:GQ:DP        0|1:91:33       0|1:100:29      0|0:87:30
+16     60278430        rs8055238       A       G       .       PASS    AA=A;DP=76      GT:GQ:DP        0|1:92:14       0|1:100:11      0|0:100:50
+1      85938156        rs1775993       G       T       .       PASS    AA=T;DP=79;HM2;HM3      GT:GQ:DP        0|1:92:14       1|1:39:14       0|1:100:52
+19     61916974        rs4801365       G       A       .       PASS    AA=A;DP=87      GT:GQ:DP        0|1:92:15       1|1:51:18       0|1:100:54
+2      107495133       rs266260        T       C       .       PASS    AA=T;DP=119     GT:GQ:DP        0|1:92:17       0|1:49:13       0|0:100:46
+12     29242323        rs11050114      A       C       .       PASS    AA=A;DP=76      GT:GQ:DP        0|1:92:17       0|1:94:21       0|0:100:39
+6      147381906       rs59226448      A       T       .       PASS    AA=T;DP=86      GT:GQ:DP        0|1:92:17       1|1:63:22       0|1:100:47
+4      65562211        rs920510        T       C       .       PASS    AA=C;DP=87      GT:GQ:DP        0|1:92:20       0|1:19:15       0|0:100:50
+15     96251182        rs11633333      C       T       .       PASS    AA=C;DP=93      GT:GQ:DP        0|1:92:21       0|1:78:17       0|0:100:55
+11     129966205       rs4937541       C       T       .       PASS    AA=C;DP=105     GT:GQ:DP        0|1:92:22       0|1:100:15      0|0:100:69
+14     75657553        rs2591089       A       C       .       PASS    AA=A;DP=118     GT:GQ:DP        0|1:92:27       0|1:100:23      0|0:100:70
+6      72237197        rs1738071       A       G       .       PASS    AA=A;DP=106     GT:GQ:DP        0|1:92:28       1|1:42:16       0|1:100:62
+14     47208927        rs12882310      A       G       .       PASS    AA=A;DP=127     GT:GQ:DP        0|1:92:30       0|1:88:25       0|0:100:73
+12     100131247       .       A       G       .       PASS    AA=A;DP=145     GT:GQ:DP        0|1:92:31       0|1:100:30      0|0:84:41
+2      37685986        rs7591693       C       G       .       PASS    AA=C;DP=113     GT:GQ:DP        0|1:92:32       1|1:33:23       0|1:100:59
+15     32749177        rs16959368      T       C       .       PASS    AA=T;DP=183     GT:GQ:DP        0|1:92:43       0|1:100:30      0|0:100:56
+17     50228609        rs28667730      A       T       .       PASS    AA=T;DP=89      GT:GQ:DP        0|1:93:13       0|1:89:12       0|0:100:63
+3      180897399       rs4854947       G       A       .       PASS    AA=A;DP=74      GT:GQ:DP        0|1:93:14       1|1:44:22       0|1:100:39
+6      34800563        rs6906500       A       G       .       PASS    AA=G;DP=107     GT:GQ:DP        0|1:93:17       0|1:100:18      0|0:84:29
+2      209743184       rs61426921      A       G       .       PASS    AA=N;DP=66      GT:GQ:DP        0|1:93:17       0|1:75:16       0|0:55:25
+17     34271635        rs11870254      A       C       .       PASS    AA=C;DP=112     GT:GQ:DP        0|1:93:18       0|1:67:15       0|0:100:82
+13     53955516        rs7318440       A       T       .       PASS    AA=A;DP=93      GT:GQ:DP        0|1:93:19       0|1:28:20       0|0:100:48
+6      84885658        rs2324636       A       G       .       PASS    AA=G;DP=87      GT:GQ:DP        0|1:93:20       0|1:77:19       0|0:100:46
+3      50449736        rs28580410      A       G       .       PASS    AA=A;DP=105     GT:GQ:DP        0|1:93:20       0|1:90:16       0|0:100:71
+6      123795318       rs4348340       C       G       .       PASS    AA=C;DP=90      GT:GQ:DP        0|1:93:21       0|1:76:15       0|0:100:55
+6      30046457        rs7754245       A       G       .       PASS    AA=.;DP=109     GT:GQ:DP        0|1:93:23       1|1:42:15       0|1:100:71
+4      42590901        rs6816077       C       T       .       PASS    AA=T;DP=112     GT:GQ:DP        0|1:93:23       1|1:49:27       0|1:100:62
+10     94555566        rs2422066       T       A       .       PASS    AA=t;DP=93      GT:GQ:DP        0|1:93:24       0|1:36:14       0|0:100:43
+5      127370171       rs17164449      C       T       .       PASS    AA=c;DP=118     GT:GQ:DP        0|1:93:24       1|1:54:19       0|1:100:75
+11     80540599        rs2461665       T       C       .       PASS    AA=C;DP=111     GT:GQ:DP        0|1:93:24       1|1:60:23       0|1:100:65
+9      26741369        rs4978103       T       C       .       PASS    AA=G;DP=112     GT:GQ:DP        0|1:93:24       1|1:75:26       0|1:100:62
+3      187684555       rs12107740      C       A       .       PASS    AA=C;DP=110     GT:GQ:DP        0|1:93:25       0|1:88:24       0|0:100:47
+8      26032393        rs2976325       C       T       .       PASS    AA=C;DP=101     GT:GQ:DP        0|1:93:26       0|0:20:10       0|0:100:65
+6      139519733       rs2149045       G       C       .       PASS    AA=C;DP=97      GT:GQ:DP        0|1:93:26       1|1:39:14       0|1:100:57
+4      109212895       rs3796994       G       A       .       PASS    AA=A;DP=121     GT:GQ:DP        0|1:93:26       1|1:39:15       0|1:100:76
+5      61248345        .       T       C       .       PASS    AA=T;DP=125     GT:GQ:DP        0|1:93:28       1|1:70:30       0|1:100:62
+19     5351865 rs8103191       C       G       .       PASS    AA=G;DP=127     GT:GQ:DP        0|1:93:30       1|1:60:21       0|1:100:74
+4      100677471       rs10000018      A       G       .       PASS    AA=G;DP=103     GT:GQ:DP        0|1:93:31       0|1:63:17       0|0:100:56
+12     120822081       rs1177573       C       T       .       PASS    AA=C;DP=125     GT:GQ:DP        0|1:93:33       0|1:56:12       0|0:100:76
+1      76012561        rs11810154      C       G       .       PASS    AA=C;DP=118;HM2 GT:GQ:DP        0|1:93:34       0|1:100:25      0|0:100:60
+11     78373171        rs625895        G       A       .       PASS    AA=A;DP=162     GT:GQ:DP        0|1:93:34       0|1:95:19       0|0:100:52
+9      5812475 rs1573119       A       T       .       PASS    AA=T;DP=100     GT:GQ:DP        0|1:94:14       0|1:100:23      0|0:100:62
+5      29088461        rs519037        G       T       .       PASS    AA=T;DP=67      GT:GQ:DP        0|1:94:15       0|1:100:14      0|0:100:36
+2      139282774       .       A       G       .       PASS    AA=A;DP=92      GT:GQ:DP        0|1:94:19       0|0:8:5 0|0:100:69
+2      175797665       rs2082503       A       G       .       PASS    AA=G;DP=99      GT:GQ:DP        0|1:94:19       0|1:96:26       0|0:100:54
+5      162788271       rs58778444      T       A       .       PASS    AA=T;DP=63      GT:GQ:DP        0|1:94:20       0|0:25:14       0|0:4:18
+5      160506053       rs349754        G       A       .       PASS    AA=A;DP=115     GT:GQ:DP        0|1:94:20       1|1:90:31       0|1:100:58
+1      176923076       rs12742156      G       A       .       PASS    AA=G;DP=110     GT:GQ:DP        0|1:94:21       1|1:48:18       0|1:100:73
+8      78561812        rs11990452      T       G       .       PASS    AA=T;DP=101     GT:GQ:DP        0|1:94:22       1|1:21:19       0|1:100:58
+6      44112751        .       G       A       .       PASS    AA=g;DP=99      GT:GQ:DP        0|1:94:22       1|1:43:23       0|1:100:53
+4      99192959        rs783932        C       G       .       PASS    AA=C;DP=115     GT:GQ:DP        0|1:94:22       1|1:69:25       0|1:100:66
+5      58814171        rs931855        G       T       .       PASS    AA=T;DP=111     GT:GQ:DP        0|1:94:23       0|1:100:19      0|0:100:72
+17     45914036        rs11871603      T       G       .       PASS    AA=G;DP=122     GT:GQ:DP        0|1:94:23       0|1:100:29      0|0:100:66
+10     87381997        rs34144044      A       G       .       PASS    AA=G;DP=130     GT:GQ:DP        0|1:94:26       0|1:87:27       0|0:100:76
+5      177775299       rs4432911       A       G       .       PASS    AA=A;DP=83      GT:GQ:DP        0|1:94:27       1|1:36:14       0|1:100:35
+11     76003469        rs7118304       A       G       .       PASS    AA=G;DP=109     GT:GQ:DP        0|1:94:28       1|1:57:21       0|1:100:60
+3      96195081        .       G       A       .       PASS    AA=A;DP=116     GT:GQ:DP        0|1:94:29       0|1:100:22      0|0:100:67
+3      132587761       .       C       G       .       PASS    AA=C;DP=160     GT:GQ:DP        0|1:94:29       0|1:92:24       0|0:100:61
+19     926387  rs11085230      T       C       .       PASS    AA=T;DP=84      GT:GQ:DP        0|1:94:29       1|1:21:12       0|1:100:43
+15     54653674        rs6493876       T       C       .       PASS    AA=T;DP=116     GT:GQ:DP        0|1:94:29       1|1:8:19        0|1:100:69
+8      139820484       rs10106218      A       G       .       PASS    AA=A;DP=139     GT:GQ:DP        0|1:94:31       1|1:63:23       0|1:100:87
+9      76613387        .       T       C       .       PASS    AA=T;DP=138     GT:GQ:DP        0|1:94:33       0|1:99:22       0|0:100:81
+4      1489132 rs28539813      C       T       .       PASS    AA=t;DP=93      GT:GQ:DP        0|1:94:34       1|1:30:11       0|1:100:41
+5      28242991        rs4518412       C       T       .       PASS    AA=T;DP=64      GT:GQ:DP        0|1:95:11       1|1:36:13       0|1:100:40
+4      69070042        rs4860300       C       T       .       PASS    AA=.;DP=79      GT:GQ:DP        0|1:95:12       0|0:74:23       0|0:95:45
+10     123503222       rs1693674       C       T       .       PASS    AA=C;DP=83      GT:GQ:DP        0|1:95:15       1|1:51:19       0|1:100:48
+6      20875680        rs4320364       A       T       .       PASS    AA=T;DP=64      GT:GQ:DP        0|1:95:17       1|1:8:16        0|1:6:26
+1      62266408        rs2183996       A       G       .       PASS    AA=G;DP=83      GT:GQ:DP        0|1:95:18       1|1:48:17       0|1:100:47
+11     17562413        rs10832811      C       A       .       PASS    AA=A;DP=91      GT:GQ:DP        0|1:95:19       0|1:100:17      0|0:100:55
+5      132238335       rs803221        T       C       .       PASS    AA=C;DP=101     GT:GQ:DP        0|1:95:19       0|1:100:24      0|0:100:58
+20     10812326        rs6040218       C       T       .       PASS    AA=T;DP=86      GT:GQ:DP        0|1:95:19       1|1:19:13       0|1:100:54
+6      124081658       rs342648        G       T       .       PASS    AA=T;DP=97      GT:GQ:DP        0|1:95:19       1|1:35:24       0|1:100:51
+4      8352469 .       T       A       .       PASS    AA=t;DP=91      GT:GQ:DP        0|1:95:20       0|1:12:18       0|0:100:53
+5      26042973        .       C       G       .       PASS    AA=C;DP=105     GT:GQ:DP        0|1:95:20       1|1:42:15       0|1:100:70
+13     85843650        rs9585223       T       C       .       PASS    AA=T;DP=64      GT:GQ:DP        0|1:95:21       0|1:36:14       0|0:47:23
+18     10406085        rs206505        C       A       .       PASS    AA=A;DP=99      GT:GQ:DP        0|1:95:23       1|1:39:18       0|1:100:61
+13     78114179        rs9601108       G       A       .       PASS    AA=G;DP=112     GT:GQ:DP        0|1:95:24       0|1:100:22      0|0:100:65
+8      47503279        .       C       T       .       PASS    AA=.;DP=130     GT:GQ:DP        0|1:95:24       0|1:45:34       0|0:92:74
+7      14615041        rs7796807       C       T       .       PASS    AA=T;DP=100     GT:GQ:DP        0|1:95:24       0|1:90:16       0|0:100:58
+12     114838988       rs11067834      G       A       .       PASS    AA=G;DP=123     GT:GQ:DP        0|1:95:24       1|1:54:21       0|1:100:83
+11     115525936       rs510116        A       C       .       PASS    AA=a;DP=103     GT:GQ:DP        0|1:95:26       0|1:19:20       0|0:100:56
+2      210217175       rs2663651       A       G       .       PASS    AA=N;DP=119     GT:GQ:DP        0|1:95:28       0|1:76:14       0|0:100:75
+13     44848597        .       C       G       .       PASS    AA=.;DP=122     GT:GQ:DP        0|1:95:29       0|1:54:7        0|0:100:88
+5      179984647       rs307824        T       G       .       PASS    AA=G;DP=91      GT:GQ:DP        0|1:95:29       1|1:33:14       0|1:100:36
+14     71539344        rs2239268       G       A       .       PASS    AA=G;DP=143     GT:GQ:DP        0|1:95:30       0|1:100:34      0|0:100:64
+17     44561098        rs10853109      A       G       .       PASS    AA=N;DP=97      GT:GQ:DP        0|1:95:30       0|1:58:11       0|0:100:57
+6      31193680        rs3094213       G       A       .       PASS    AA=g;DP=99      GT:GQ:DP        0|1:95:31       1|1:24:11       0|1:100:58
+14     19713615        rs7142335       C       T       .       PASS    AA=t;DP=98      GT:GQ:DP        0|1:95:32       0|1:95:23       0|0:100:42
+7      127575532       rs322731        T       C       .       PASS    AA=C;DP=134     GT:GQ:DP        0|1:95:33       1|1:46:21       0|1:100:79
+12     8907476 rs7305103       G       A       .       PASS    AA=A;DP=119     GT:GQ:DP        0|1:95:33       1|1:57:20       0|1:100:66
+12     98301149        rs10777976      T       C       .       PASS    AA=T;DP=139     GT:GQ:DP        0|1:95:33       1|1:90:31       0|1:100:76
+21     34642868        rs56196518      C       T       .       PASS    AA=c;DP=135     GT:GQ:DP        0|1:95:36       0|1:33:25       0|0:100:74
+6      99309943        rs4406241       T       C       .       PASS    AA=T;DP=159     GT:GQ:DP        0|1:95:36       1|1:63:23       0|1:100:100
+4      44184374        .       C       A       .       PASS    AA=c;DP=162     GT:GQ:DP        0|1:95:38       0|0:17:43       0|0:18:84
+6      113389657       rs1288155       T       G       .       PASS    AA=T;DP=139     GT:GQ:DP        0|1:95:39       0|1:44:25       0|0:100:76
+11     67535585        .       G       A       .       PASS    AA=G;DP=149     GT:GQ:DP        0|1:95:39       0|1:62:19       0|0:100:49
+4      72916922        rs55687051      C       A       .       PASS    AA=C;DP=87      GT:GQ:DP        0|1:96:14       0|0:18:15       0|0:100:59
+5      66989416        rs6449891       A       G       .       PASS    AA=G;DP=82      GT:GQ:DP        0|1:96:16       1|1:45:17       0|1:100:48
+9      26279217        rs353436        T       C       .       PASS    AA=C;DP=102     GT:GQ:DP        0|1:96:19       1|1:31:24       0|1:100:58
+2      239564309       rs4852080       G       A       .       PASS    AA=A;DP=106     GT:GQ:DP        0|1:96:20       0|1:100:20      0|0:100:62
+8      19825255        .       T       C       .       PASS    AA=T;DP=128     GT:GQ:DP        0|1:96:20       0|1:100:25      0|0:100:82
+8      139174001       rs1325048       A       G       .       PASS    AA=-;DP=79      GT:GQ:DP        0|1:96:20       1|1:12:16       0|1:100:43
+6      98863054        rs12175271      T       C       .       PASS    AA=T;DP=123     GT:GQ:DP        0|1:96:22       0|1:100:28      0|0:100:74
+12     66921463        rs10878796      A       G       .       PASS    AA=A;DP=137     GT:GQ:DP        0|1:96:22       0|1:71:26       0|0:100:89
+8      3797954 rs2740859       G       A       .       PASS    AA=A;DP=71      GT:GQ:DP        0|1:96:24       1|1:24:9        0|1:100:39
+9      265049  rs523830        G       A       .       PASS    AA=A;DP=121     GT:GQ:DP        0|1:96:24       1|1:57:20       0|1:100:78
+1      40356713        rs61779042      G       A       .       PASS    AA=G;DP=124     GT:GQ:DP        0|1:96:25       0|1:100:33      0|0:100:63
+9      82090630        rs7020811       T       C       .       PASS    AA=C;DP=119     GT:GQ:DP        0|1:96:25       1|1:57:20       0|1:100:75
+14     72690290        rs10136911      T       C       .       PASS    AA=T;DP=93      GT:GQ:DP        0|1:96:26       0|0:13:12       0|0:100:55
+19     52052391        rs2008300       C       T       .       PASS    AA=T;DP=125     GT:GQ:DP        0|1:96:27       1|1:34:23       0|1:100:63
+9      132620443       rs4740366       A       G       .       PASS    AA=G;DP=161     GT:GQ:DP        0|1:96:29       0|1:100:27      0|0:100:63
+9      100502996       rs337538        G       A       .       PASS    AA=g;DP=129     GT:GQ:DP        0|1:96:30       0|1:100:25      0|0:100:71
+2      48666058        rs55858189      C       T       .       PASS    AA=T;DP=112     GT:GQ:DP        0|1:96:31       0|1:82:17       0|0:100:66
+4      60967239        rs1840591       A       C       .       PASS    AA=C;DP=112     GT:GQ:DP        0|1:96:34       1|1:7:13        0|1:100:65
+7      124897390       .       A       C       .       PASS    AA=A;DP=98      GT:GQ:DP        0|1:97:13       1|1:47:27       0|1:100:57
+21     22102441        rs2827050       C       A       .       PASS    AA=C;DP=117     GT:GQ:DP        0|1:97:15       0|1:100:26      0|0:93:32
+12     74528942        rs12230172      A       G       .       PASS    AA=A;DP=102     GT:GQ:DP        0|1:97:16       1|1:66:23       0|1:100:61
+19     23978717        rs55901327      G       A       .       PASS    AA=G;DP=76      GT:GQ:DP        0|1:97:17       0|0:29:8        0|0:100:51
+7      66748855        rs7799784       C       A       .       PASS    AA=C;DP=98      GT:GQ:DP        0|1:97:20       0|1:89:11       0|0:100:69
+12     128839060       .       T       A       .       PASS    AA=T;DP=108     GT:GQ:DP        0|1:97:21       1|1:48:17       0|1:100:72
+2      157471847       .       A       G       .       PASS    AA=A;DP=88      GT:GQ:DP        0|1:97:23       0|1:100:15      0|0:100:50
+17     73530936        rs9908896       G       A       .       PASS    AA=A;DP=112     GT:GQ:DP        0|1:97:23       0|1:87:19       0|0:100:66
+2      202633073       rs6756196       G       A       .       PASS    AA=A;DP=114     GT:GQ:DP        0|1:97:24       1|1:57:20       0|1:100:69
+7      156089232       rs3778929       T       C       .       PASS    AA=T;DP=126     GT:GQ:DP        0|1:97:25       0|1:23:18       0|0:100:83
+6      139597594       .       C       T       .       PASS    AA=T;DP=113     GT:GQ:DP        0|1:97:26       0|1:48:18       0|0:100:70
+16     48877701        rs3760011       T       C       .       PASS    AA=C;DP=100     GT:GQ:DP        0|1:97:27       0|0:8:13        0|0:100:60
+3      8158799 rs607390        G       A       .       PASS    AA=G;DP=138     GT:GQ:DP        0|1:97:27       1|1:69:24       0|1:100:87
+13     80022911        rs4885731       G       A       .       PASS    AA=A;DP=92      GT:GQ:DP        0|1:97:28       1|1:6:12        0|1:100:52
+11     10464557        rs11042846      A       G       .       PASS    AA=G;DP=107     GT:GQ:DP        0|1:97:29       0|0:22:10       0|0:100:68
+4      117704498       rs4834563       A       G       .       PASS    AA=G;DP=130     GT:GQ:DP        0|1:97:30       1|1:75:26       0|1:100:75
+21     19910552        rs2825681       A       G       .       PASS    AA=G;DP=143     GT:GQ:DP        0|1:97:30       1|1:84:31       0|1:100:82
+1      71136337        rs35368675      C       G       .       PASS    AA=C;DP=137     GT:GQ:DP        0|1:97:31       0|1:100:28      0|0:100:81
+11     68941057        rs7943577       A       G       .       PASS    AA=A;DP=116     GT:GQ:DP        0|1:97:32       1|1:54:19       0|1:100:63
+7      154630041       rs11763457      G       A       .       PASS    AA=G;DP=138     GT:GQ:DP        0|1:97:36       0|1:36:13       0|0:100:84
+6      160682670       .       T       C       .       PASS    AA=T;DP=71      GT:GQ:DP        0|1:98:13       0|0:35:10       0|0:100:47
+3      163876115       rs16851252      A       C       .       PASS    AA=C;DP=74      GT:GQ:DP        0|1:98:13       0|1:95:22       0|0:100:41
+13     53237375        rs4476053       G       T       .       PASS    AA=T;DP=77      GT:GQ:DP        0|1:98:15       1|1:12:16       0|1:100:48
+8      64601819        rs13255857      C       T       .       PASS    AA=T;DP=92      GT:GQ:DP        0|1:98:16       0|1:100:19      0|0:100:57
+13     89592577        rs1352743       G       A       .       PASS    AA=G;DP=82      GT:GQ:DP        0|1:98:16       1|1:51:18       0|1:100:49
+2      132276073       rs12999946      G       C       .       PASS    AA=.;DP=71      GT:GQ:DP        0|1:98:19       0|0:29:9        0|0:100:44
+10     55016708        rs351845        G       C       .       PASS    AA=C;DP=103     GT:GQ:DP        0|1:98:19       1|1:63:23       0|1:100:60
+1      97680482        rs10783063      T       G       .       PASS    AA=G;DP=117;HM2;HM3     GT:GQ:DP        0|1:98:20       0|1:98:22       0|0:100:36
+13     61243964        rs7998919       G       A       .       PASS    AA=A;DP=97      GT:GQ:DP        0|1:98:21       1|1:60:21       0|1:100:50
+22     19081255        rs361591        C       T       .       PASS    AA=.;DP=109     GT:GQ:DP        0|1:98:22       0|1:100:20      0|0:100:69
+7      115643838       rs1528246       T       C       .       PASS    AA=C;DP=132     GT:GQ:DP        0|1:98:23       1|1:69:28       0|1:100:65
+11     22209226        rs10833724      G       A       .       PASS    AA=A;DP=106     GT:GQ:DP        0|1:98:23       1|1:71:27       0|1:100:57
+19     34530603        rs8112567       T       G       .       PASS    AA=G;DP=94      GT:GQ:DP        0|1:98:24       1|1:46:21       0|1:100:49
+16     1080021 rs11860798      G       A       .       PASS    AA=g;DP=94      GT:GQ:DP        0|1:98:26       0|1:28:9        0|0:100:59
+9      6697144 .       A       T       .       PASS    AA=T;DP=117     GT:GQ:DP        0|1:98:28       0|1:44:16       0|0:100:71
+6      54959924        rs1503136       A       C       .       PASS    AA=A;DP=113     GT:GQ:DP        0|1:98:28       1|1:65:32       0|1:100:44
+1      240941582       rs10803075      G       A       .       PASS    AA=G;DP=141;HM2;HM3     GT:GQ:DP        0|1:98:29       0|1:100:37      0|0:100:74
+3      176974360       rs28572309      A       G       .       PASS    AA=A;DP=113     GT:GQ:DP        0|1:98:29       0|1:38:27       0|0:100:55
+8      38440710        rs4733948       T       C       .       PASS    AA=C;DP=86      GT:GQ:DP        0|1:98:29       1|1:33:13       0|1:100:45
+13     70237628        rs1280903       G       C       .       PASS    AA=G;DP=152     GT:GQ:DP        0|1:98:29       1|1:93:32       0|1:100:88
+8      4031033 rs3849838       T       G       .       PASS    AA=G;DP=107     GT:GQ:DP        0|1:98:30       1|1:54:19       0|1:100:48
+13     40995057        rs348217        A       G       .       PASS    AA=a;DP=143     GT:GQ:DP        0|1:98:30       1|1:59:28       0|1:100:41
+17     54132648        rs7208872       A       G       .       PASS    AA=A;DP=132     GT:GQ:DP        0|1:98:31       0|1:79:18       0|0:100:84
+12     13729905        rs2268108       C       G       .       PASS    AA=C;DP=144     GT:GQ:DP        0|1:98:32       0|1:50:22       0|0:100:46
+15     86928464        rs6496502       A       G       .       PASS    AA=G;DP=123     GT:GQ:DP        0|1:98:34       1|1:60:21       0|1:100:66
+5      36742087        rs13436060      A       C       .       PASS    AA=A;DP=125     GT:GQ:DP        0|1:98:36       0|1:100:27      0|0:100:63
+1      188468347       rs4399162       G       A       .       PASS    AA=T;DP=107;HM2 GT:GQ:DP        0|1:99:13       0|1:63:17       0|0:81:29
+3      192612410       rs497918        T       C       .       PASS    AA=T;DP=68      GT:GQ:DP        0|1:99:16       0|1:67:12       0|0:100:39
+3      131985846       .       G       A       .       PASS    AA=A;DP=93      GT:GQ:DP        0|1:99:16       1|1:69:24       0|1:100:54
+9      136741236       rs7852238       G       C       .       PASS    AA=g;DP=94      GT:GQ:DP        0|1:99:18       0|1:55:10       0|0:100:56
+5      64825705        rs245521        G       A       .       PASS    AA=A;DP=82      GT:GQ:DP        0|1:99:18       1|1:45:16       0|1:100:45
+1      55070572        rs1541426       A       G       .       PASS    AA=A;DP=91;HM2  GT:GQ:DP        0|1:99:19       0|1:34:13       0|0:100:62
+13     81517000        rs7994491       G       A       .       PASS    AA=A;DP=79      GT:GQ:DP        0|1:99:19       0|1:80:18       0|0:100:43
+5      160448301       rs7724310       G       A       .       PASS    AA=G;DP=95      GT:GQ:DP        0|1:99:20       0|1:99:25       0|0:100:50
+5      3219583 rs1494684       A       G       .       PASS    AA=G;DP=122     GT:GQ:DP        0|1:99:22       0|1:76:18       0|0:100:76
+19     14322417        rs12610739      G       A       .       PASS    AA=G;DP=69      GT:GQ:DP        0|1:99:23       0|0:20:5        0|0:100:43
+9      110932422       rs1043998       A       T       .       PASS    AA=A;DP=103     GT:GQ:DP        0|1:99:23       0|1:81:17       0|0:100:65
+5      129704290       rs13172910      G       A       .       PASS    AA=A;DP=109     GT:GQ:DP        0|1:99:26       1|1:39:24       0|1:100:62
+9      15796573        rs56401042      T       C       .       PASS    AA=G;DP=110     GT:GQ:DP        0|1:99:26       1|1:66:23       0|1:100:62
+17     1169917 rs7209189       C       T       .       PASS    AA=C;DP=131     GT:GQ:DP        0|1:99:27       0|1:99:23       0|0:100:82
+17     14361301        rs2323287       A       G       .       PASS    AA=G;DP=115     GT:GQ:DP        0|1:99:27       1|1:75:26       0|1:100:62
+19     7081686 rs8106714       G       A       .       PASS    AA=G;DP=97      GT:GQ:DP        0|1:99:28       0|0:21:16       0|0:100:36
+11     118421829       .       T       C       .       PASS    AA=T;DP=133     GT:GQ:DP        0|1:99:28       0|0:34:16       0|0:100:47
+20     2933533 rs3746692       C       A       .       PASS    AA=A;DP=87      GT:GQ:DP        0|1:99:28       1|1:15:8        0|1:100:54
+4      164009056       rs2320182       C       T       .       PASS    AA=T;DP=137     GT:GQ:DP        0|1:99:30       0|1:51:29       0|0:100:37
+6      121958123       rs6912185       C       T       .       PASS    AA=C;DP=127     GT:GQ:DP        0|1:99:30       0|1:63:17       0|0:100:38
+2      8437339 rs7593528       A       G       .       PASS    AA=G;DP=108     GT:GQ:DP        0|1:99:30       1|1:54:19       0|1:100:49
+8      11128139        .       C       T       .       PASS    AA=C;DP=139     GT:GQ:DP        0|1:99:31       0|0:19:19       0|0:100:90
+9      37866995        .       G       C       .       PASS    AA=G;DP=119     GT:GQ:DP        0|1:99:32       0|0:9:20        0|0:100:69
+6      33903106        rs11754648      T       C       .       PASS    AA=C;DP=146     GT:GQ:DP        0|1:99:32       1|1:34:24       0|1:100:90
+1      218254605       .       A       G       .       PASS    AA=A;DP=142     GT:GQ:DP        0|1:99:36       0|1:100:18      0|0:100:86
+3      186540321       rs4687248       A       C       .       PASS    AA=A;DP=147     GT:GQ:DP        0|1:99:38       0|1:53:29       0|0:84:41
+4      168512556       rs10016118      C       T       .       PASS    AA=T;DP=71      GT:GQ:DP        0|1:9:19        1|1:12:6        0|1:100:38
+12     32368173        rs261901        T       C       .       PASS    AA=C;DP=81      GT:GQ:DP        1/0:100:15      1/0:64:13       1/0:100:54
+8      124071348       .       T       G       .       PASS    AA=T;DP=55      GT:GQ:DP        1/0:100:15      1/0:72:13       1/0:100:20
+8      40694152        rs9643847       G       A       .       PASS    AA=G;DP=115     GT:GQ:DP        1/0:100:16      1/0:100:33      1/0:100:65
+10     99281415        rs10882955      T       C       .       PASS    AA=C;DP=81      GT:GQ:DP        1/0:100:16      1/0:71:14       1/0:100:49
+2      129968525       rs9646707       T       G       .       PASS    AA=T;DP=92      GT:GQ:DP        1/0:100:17      1/0:100:17      1/0:100:57
+12     33227130        rs7967021       T       A       .       PASS    AA=A;DP=109     GT:GQ:DP        1/0:100:17      1/0:100:17      1/0:100:58
+3      5702278 rs6762586       T       C       .       PASS    AA=C;DP=78      GT:GQ:DP        1/0:100:17      1/0:100:21      1/0:100:40
+8      4866876 .       T       C       .       PASS    AA=T;DP=112     GT:GQ:DP        1/0:100:17      1/0:100:23      1/0:100:71
+2      66065411        rs10199647      T       C       .       PASS    AA=T;DP=107     GT:GQ:DP        1/0:100:17      1/0:100:28      1/0:100:59
+5      23875067        rs7731172       T       C       .       PASS    AA=C;DP=74      GT:GQ:DP        1/0:100:17      1/0:47:14       1/0:100:43
+5      24509573        rs722786        C       A       .       PASS    AA=C;DP=81      GT:GQ:DP        1/0:100:17      1/0:71:13       1/0:100:51
+1      182572592       .       G       A       .       PASS    AA=G;DP=108     GT:GQ:DP        1/0:100:17      1/0:72:21       1/0:100:71
+15     29644859        .       T       C       .       PASS    AA=T;DP=75      GT:GQ:DP        1/0:100:17      1/0:78:19       1/0:100:38
+12     471845  rs11063252      G       A       .       PASS    AA=A;DP=81      GT:GQ:DP        1/0:100:17      1/0:89:16       1/0:100:49
+18     26814705        rs9961958       T       G       .       PASS    AA=T;DP=108     GT:GQ:DP        1/0:100:17      1/0:90:23       1/0:100:68
+2      229472916       rs6731969       T       A       .       PASS    AA=T;DP=90      GT:GQ:DP        1/0:100:18      1/0:100:18      1/0:100:55
+17     49781719        rs8082125       G       A       .       PASS    AA=G;DP=84      GT:GQ:DP        1/0:100:18      1/0:100:20      1/0:100:35
+14     43617635        rs1998023       G       A       .       PASS    AA=A;DP=93      GT:GQ:DP        1/0:100:18      1/0:100:20      1/0:100:54
+13     71905522        .       T       A       .       PASS    AA=T;DP=93      GT:GQ:DP        1/0:100:18      1/0:100:22      1/0:100:55
+1      215463415       rs11117808      C       A       .       PASS    AA=A;DP=95;HM2;HM3      GT:GQ:DP        1/0:100:18      1/0:100:23      1/0:100:54
+7      79971968        rs6962693       T       G       .       PASS    AA=T;DP=110     GT:GQ:DP        1/0:100:18      1/0:100:23      1/0:100:70
+2      53666448        .       G       A       .       PASS    AA=G;DP=91      GT:GQ:DP        1/0:100:18      1/0:100:24      1/0:100:45
+13     29091195        rs280940        T       G       .       PASS    AA=G;DP=92      GT:GQ:DP        1/0:100:18      1/0:100:27      1/0:100:39
+10     130580978       rs7898029       G       A       .       PASS    AA=A;DP=84      GT:GQ:DP        1/0:100:18      1/0:18:10       1/0:100:44
+7      2613476 rs1056568       T       G       .       PASS    AA=T;DP=70      GT:GQ:DP        1/0:100:18      1/0:53:14       1/0:86:31
+13     97297848        rs16954570      T       A       .       PASS    AA=T;DP=88      GT:GQ:DP        1/0:100:18      1/0:71:13       1/0:100:57
+18     44848848        .       G       A       .       PASS    AA=A;DP=130     GT:GQ:DP        1/0:100:18      1/0:71:13       1/0:100:57
+8      110330623       rs2980595       T       C       .       PASS    AA=T;DP=97      GT:GQ:DP        1/0:100:18      1/0:71:14       1/0:100:64
+13     48456114        rs7998359       G       A       .       PASS    AA=A;DP=85      GT:GQ:DP        1/0:100:18      1/0:79:21       1/0:100:46
+16     60414449        rs7187971       C       A       .       PASS    AA=C;DP=76      GT:GQ:DP        1/0:100:18      1/0:94:19       1/0:100:41
+20     6443295 rs6140020       G       A       .       PASS    AA=A;DP=99      GT:GQ:DP        1/0:100:19      1/0:100:19      1/0:100:62
+1      108975785       rs59956247      T       C       .       PASS    AA=T;DP=86      GT:GQ:DP        1/0:100:19      1/0:100:20      1/0:100:41
+1      183850827       rs12078333      T       G       .       PASS    AA=T;DP=125     GT:GQ:DP        1/0:100:19      1/0:100:20      1/0:100:81
+6      95223213        rs9360067       T       C       .       PASS    AA=T;DP=85      GT:GQ:DP        1/0:100:19      1/0:100:22      1/0:100:40
+8      133904731       rs235439        G       C       .       PASS    AA=G;DP=89      GT:GQ:DP        1/0:100:19      1/0:100:24      1/0:100:47
+4      27889268        rs16880440      T       A       .       PASS    AA=A;DP=119     GT:GQ:DP        1/0:100:19      1/0:100:24      1/0:100:75
+18     10154781        .       T       C       .       PASS    AA=T;DP=124     GT:GQ:DP        1/0:100:19      1/0:100:26      1/0:100:82
+7      108780279       rs848853        G       A       .       PASS    AA=G;DP=107     GT:GQ:DP        1/0:100:19      1/0:100:30      1/0:100:50
+8      11341526        rs2409770       T       C       .       PASS    AA=C;DP=134     GT:GQ:DP        1/0:100:19      1/0:100:30      1/0:100:85
+17     35407080        rs2241244       G       C       .       PASS    AA=C;DP=115     GT:GQ:DP        1/0:100:19      1/0:45:12       1/0:100:83
+2      43889984        rs10186086      T       A       .       PASS    AA=A;DP=76      GT:GQ:DP        1/0:100:19      1/0:52:9        1/0:100:48
+6      78767828        rs7753955       C       A       .       PASS    AA=C;DP=107     GT:GQ:DP        1/0:100:19      1/0:68:20       1/0:100:63
+4      173696282       rs12331268      C       A       .       PASS    AA=A;DP=95      GT:GQ:DP        1/0:100:19      1/0:6:13        1/0:100:64
+3      194640618       rs1489930       G       A       .       PASS    AA=A;DP=120     GT:GQ:DP        1/0:100:19      1/0:78:17       1/0:100:86
+18     25851754        rs9959426       T       C       .       PASS    AA=C;DP=83      GT:GQ:DP        1/0:100:19      1/0:87:14       1/0:100:51
+13     35702188        rs1328629       T       A       .       PASS    AA=A;DP=65      GT:GQ:DP        1/0:100:19      1/0:90:15       1/0:92:26
+7      49036159        rs7777146       T       C       .       PASS    AA=T;DP=100     GT:GQ:DP        1/0:100:19      1/0:90:21       1/0:100:59
+5      4176457 rs1911912       C       A       .       PASS    AA=A;DP=83      GT:GQ:DP        1/0:100:19      1/0:96:17       1/0:100:34
+1      228917667       rs11122580      T       C       .       PASS    AA=T;DP=96;HM2  GT:GQ:DP        1/0:100:20      1/0:100:17      1/0:100:58
+2      229400859       rs6722072       T       C       .       PASS    AA=C;DP=116     GT:GQ:DP        1/0:100:20      1/0:100:17      1/0:100:81
+5      116879319       .       G       A       .       PASS    AA=A;DP=87      GT:GQ:DP        1/0:100:20      1/0:100:19      1/0:100:46
+2      57723440        rs1405822       T       A       .       PASS    AA=A;DP=101     GT:GQ:DP        1/0:100:20      1/0:100:21      1/0:100:61
+4      155140701       rs12512968      T       C       .       PASS    AA=C;DP=107     GT:GQ:DP        1/0:100:20      1/0:100:23      1/0:100:64
+7      10502105        rs12703015      T       G       .       PASS    AA=G;DP=102     GT:GQ:DP        1/0:100:20      1/0:100:24      1/0:100:58
+9      114752073       rs7874374       T       C       .       PASS    AA=T;DP=103     GT:GQ:DP        1/0:100:20      1/0:100:24      1/0:100:59
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+9      117712464       rs3789263       G       C       .       PASS    AA=C;DP=110     GT:GQ:DP        1/0:100:20      1/0:100:25      1/0:100:67
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+6      104121419       rs4348352       T       C       .       PASS    AA=T;DP=74      GT:GQ:DP        1/0:100:20      1/0:31:5        1/0:100:50
+2      229258671       rs6717576       T       C       .       PASS    AA=C;DP=83      GT:GQ:DP        1/0:100:20      1/0:37:12       1/0:100:55
+3      60029500        rs2630177       T       C       .       PASS    AA=T;DP=76      GT:GQ:DP        1/0:100:20      1/0:37:14       1/0:100:41
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+5      145884613       rs59388392      T       C       .       PASS    AA=T;DP=101     GT:GQ:DP        1/0:100:20      1/0:41:23       1/0:100:44
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+2      115825388       rs2420819       T       C       .       PASS    AA=C;DP=103     GT:GQ:DP        1/0:100:20      1/0:62:16       1/0:100:71
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+4      70698560        rs7669593       T       C       .       PASS    AA=C;DP=91      GT:GQ:DP        1/0:100:20      1/0:72:18       1/0:100:55
+2      21935446        rs7586954       T       A       .       PASS    AA=T;DP=60      GT:GQ:DP        1/0:100:20      1/0:75:10       1/0:100:25
+7      46827157        rs10259613      G       A       .       PASS    AA=A;DP=94      GT:GQ:DP        1/0:100:20      1/0:75:13       1/0:100:61
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+8      31908643        rs435904        T       C       .       PASS    AA=T;DP=110     GT:GQ:DP        1/0:100:20      1/0:90:23       1/0:100:64
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+5      33641497        rs4495187       T       C       .       PASS    AA=T;DP=87      GT:GQ:DP        1/0:100:21      1/0:100:16      1/0:100:50
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+6      48549731        rs9473384       T       C       .       PASS    AA=T;DP=91      GT:GQ:DP        1/0:100:21      1/0:100:20      1/0:100:49
+9      17316202        rs11789741      C       A       .       PASS    AA=C;DP=97      GT:GQ:DP        1/0:100:21      1/0:100:20      1/0:100:60
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+6      145864258       rs387376        T       C       .       PASS    AA=T;DP=112     GT:GQ:DP        1/0:100:21      1/0:100:21      1/0:100:70
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+4      41286616        rs57304616      T       C       .       PASS    AA=T;DP=139     GT:GQ:DP        1/0:100:21      1/0:100:23      1/0:100:97
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+7      67867137        rs11772577      T       C       .       PASS    AA=C;DP=110     GT:GQ:DP        1/0:100:21      1/0:100:28      1/0:100:63
+5      162590078       .       G       A       .       PASS    AA=g;DP=122     GT:GQ:DP        1/0:100:21      1/0:100:30      1/0:100:72
+4      171871014       rs10027290      T       A       .       PASS    AA=A;DP=102     GT:GQ:DP        1/0:100:21      1/0:17:21       1/0:100:61
+15     71041282        rs16957506      T       A       .       PASS    AA=T;DP=135     GT:GQ:DP        1/0:100:21      1/0:26:13       1/0:100:51
+5      113296272       rs6882617       T       G       .       PASS    AA=G;DP=94      GT:GQ:DP        1/0:100:21      1/0:32:26       1/0:100:45
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+9      111823385       rs61187871      T       G       .       PASS    AA=T;DP=99      GT:GQ:DP        1/0:100:21      1/0:42:20       1/0:100:59
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+6      157379604       rs6936043       T       G       .       PASS    AA=T;DP=101     GT:GQ:DP        1/0:100:21      1/0:53:19       1/0:100:62
+6      47375436        .       T       C       .       PASS    AA=T;DP=104     GT:GQ:DP        1/0:100:21      1/0:57:25       1/0:100:56
+5      167754312       rs2008529       G       A       .       PASS    AA=A;DP=97      GT:GQ:DP        1/0:100:21      1/0:60:21       1/0:100:55
+12     126151142       rs12809681      T       C       .       PASS    AA=T;DP=104     GT:GQ:DP        1/0:100:21      1/0:62:16       1/0:100:68
+1      193865313       rs10921879      G       A       .       PASS    AA=A;DP=108     GT:GQ:DP        1/0:100:21      1/0:63:17       1/0:100:66
+9      29097914        rs1012039       C       A       .       PASS    AA=-;DP=79      GT:GQ:DP        1/0:100:21      1/0:68:14       1/0:100:36
+2      196683351       rs6705844       T       A       .       PASS    AA=T;DP=94      GT:GQ:DP        1/0:100:21      1/0:70:13       1/0:100:61
+5      161080020       rs36085124      T       C       .       PASS    AA=C;DP=76      GT:GQ:DP        1/0:100:21      1/0:70:14       1/0:100:43
+22     46973975        .       T       C       .       PASS    AA=T;DP=109     GT:GQ:DP        1/0:100:21      1/0:70:14       1/0:100:74
+4      24181029        rs7657364       T       C       .       PASS    AA=T;DP=98      GT:GQ:DP        1/0:100:21      1/0:71:16       1/0:100:61
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+7      32461315        rs11765387      T       C       .       PASS    AA=C;DP=87      GT:GQ:DP        1/0:100:21      1/0:81:26       1/0:100:30
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+2      194056886       rs1440056       T       C       .       PASS    AA=t;DP=85      GT:GQ:DP        1/0:100:21      1/0:90:15       1/0:100:48
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+6      97436409        rs2182896       T       A       .       PASS    AA=A;DP=88      GT:GQ:DP        1/0:100:22      1/0:100:21      1/0:100:44
+11     70277534        .       T       C       .       PASS    AA=t;DP=117     GT:GQ:DP        1/0:100:22      1/0:100:23      1/0:100:73
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+7      27456682        rs1112620       T       C       .       PASS    AA=T;DP=109     GT:GQ:DP        1/0:100:22      1/0:100:24      1/0:100:63
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+12     24449368        rs1396207       T       C       .       PASS    AA=C;DP=112     GT:GQ:DP        1/0:100:22      1/0:100:27      1/0:100:67
+3      54823681        rs7644892       G       A       .       PASS    AA=G;DP=118     GT:GQ:DP        1/0:100:22      1/0:100:27      1/0:100:70
+11     39178926        rs12277705      T       A       .       PASS    AA=N;DP=100     GT:GQ:DP        1/0:100:22      1/0:100:28      1/0:100:49
+2      161967668       rs4027152       G       A       .       PASS    AA=G;DP=114     GT:GQ:DP        1/0:100:22      1/0:100:32      1/0:100:59
+3      146950410       rs2399948       T       C       .       PASS    AA=T;DP=115     GT:GQ:DP        1/0:100:22      1/0:100:33      1/0:100:59
+6      111074572       rs2691173       T       C       .       PASS    AA=C;DP=124     GT:GQ:DP        1/0:100:22      1/0:16:9        1/0:100:39
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+1      31792394        .       T       C       .       PASS    AA=T;DP=88      GT:GQ:DP        1/0:100:22      1/0:41:18       1/0:100:50
+8      133980144       rs853324        T       G       .       PASS    AA=G;DP=87      GT:GQ:DP        1/0:100:22      1/0:46:16       1/0:100:40
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+2      221900490       rs59976144      T       A       .       PASS    AA=T;DP=99      GT:GQ:DP        1/0:100:22      1/0:56:14       1/0:100:61
+6      99568796        rs2747739       G       A       .       PASS    AA=g;DP=115     GT:GQ:DP        1/0:100:22      1/0:57:13       1/0:100:82
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+3      14912051        rs6442485       T       C       .       PASS    AA=C;DP=119     GT:GQ:DP        1/0:100:22      1/0:62:19       1/0:100:39
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+9      90003835        rs2814831       T       C       .       PASS    AA=T;DP=75      GT:GQ:DP        1/0:100:22      1/0:72:19       1/0:100:25
+2      118259004       rs7592499       T       C       .       PASS    AA=T;DP=101     GT:GQ:DP        1/0:100:22      1/0:72:27       1/0:100:51
+8      5385259 rs2732965       T       C       .       PASS    AA=C;DP=132     GT:GQ:DP        1/0:100:22      1/0:78:21       1/0:100:90
+2      206485402       rs2160646       T       C       .       PASS    AA=T;DP=98      GT:GQ:DP        1/0:100:22      1/0:81:22       1/0:100:52
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+5      147374561       rs1363728       T       G       .       PASS    AA=T;DP=120     GT:GQ:DP        1/0:100:22      1/0:83:24       1/0:100:67
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+13     105168387       rs9519754       T       C       .       PASS    AA=C;DP=95      GT:GQ:DP        1/0:100:22      1/0:90:20       1/0:100:53
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+2      218002336       rs13016875      T       A       .       PASS    AA=T;DP=96      GT:GQ:DP        1/0:100:22      1/0:93:18       1/0:100:58
+8      15721545        rs28432952      T       A       .       PASS    AA=T;DP=81      GT:GQ:DP        1/0:100:22      1/0:94:18       1/0:100:29
+4      37789570        rs28608906      T       G       .       PASS    AA=T;DP=91      GT:GQ:DP        1/0:100:22      1/0:94:21       1/0:100:47
+4      108761050       .       T       C       .       PASS    AA=T;DP=88      GT:GQ:DP        1/0:100:22      1/0:94:22       1/0:100:45
+5      92017433        rs10476540      G       A       .       PASS    AA=G;DP=123     GT:GQ:DP        1/0:100:22      1/0:95:25       1/0:100:73
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+8      40574573        rs11997383      T       A       .       PASS    AA=T;DP=93      GT:GQ:DP        1/0:100:23      1/0:100:20      1/0:100:47
+12     23771787        rs7980059       T       A       .       PASS    AA=T;DP=97      GT:GQ:DP        1/0:100:23      1/0:100:20      1/0:100:54
+4      17593375        rs6840334       T       C       .       PASS    AA=T;DP=82      GT:GQ:DP        1/0:100:23      1/0:100:21      1/0:100:38
+1      218980024       rs1119946       T       G       .       PASS    AA=T;DP=93      GT:GQ:DP        1/0:100:23      1/0:100:21      1/0:100:51
+1      20937754        rs1888759       G       A       .       PASS    AA=A;DP=96;HM3  GT:GQ:DP        1/0:100:23      1/0:100:21      1/0:100:52
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+6      31438174        rs9266314       T       C       .       PASS    AA=t;DP=97      GT:GQ:DP        1/0:100:23      1/0:100:23      1/0:100:52
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+4      55834763        rs56229453      T       G       .       PASS    AA=T;DP=111     GT:GQ:DP        1/0:100:23      1/0:100:24      1/0:100:64
+2      149052014       rs4972379       T       A       .       PASS    AA=t;DP=114     GT:GQ:DP        1/0:100:23      1/0:100:25      1/0:100:65
+2      122031313       rs10210974      T       C       .       PASS    AA=C;DP=108     GT:GQ:DP        1/0:100:23      1/0:100:26      1/0:100:57
+6      75060657        rs12526986      C       A       .       PASS    AA=C;DP=116     GT:GQ:DP        1/0:100:23      1/0:100:26      1/0:100:67
+9      135672215       rs7048247       T       C       .       PASS    AA=C;DP=126     GT:GQ:DP        1/0:100:23      1/0:100:26      1/0:100:79
+8      33125460        rs28613748      C       A       .       PASS    AA=C;DP=102     GT:GQ:DP        1/0:100:23      1/0:100:29      1/0:100:50
+17     13082157        rs59683701      T       C       .       PASS    AA=T;DP=124     GT:GQ:DP        1/0:100:23      1/0:100:29      1/0:100:72
+6      161012255       .       C       A       .       PASS    AA=.;DP=103     GT:GQ:DP        1/0:100:23      1/0:100:33      1/0:100:37
+17     14878216        rs16950897      T       C       .       PASS    AA=T;DP=94      GT:GQ:DP        1/0:100:23      1/0:10:7        1/0:100:64
+7      115585650       rs7800449       T       A       .       PASS    AA=A;DP=79      GT:GQ:DP        1/0:100:23      1/0:26:12       1/0:100:46
+7      41490951        rs6953805       G       A       .       PASS    AA=g;DP=92      GT:GQ:DP        1/0:100:23      1/0:26:27       1/0:100:33
+8      132637681       rs35795271      T       G       .       PASS    AA=G;DP=110     GT:GQ:DP        1/0:100:23      1/0:31:20       1/0:100:69
+12     32977908        rs28687351      G       A       .       PASS    AA=G;DP=94      GT:GQ:DP        1/0:100:23      1/0:32:12       1/0:100:60
+1      74059004        .       T       G       .       PASS    AA=T;DP=87      GT:GQ:DP        1/0:100:23      1/0:44:15       1/0:100:47
+6      163803073       rs2757587       G       C       .       PASS    AA=G;DP=111     GT:GQ:DP        1/0:100:23      1/0:44:21       1/0:100:65
+3      30027403        rs1857883       G       A       .       PASS    AA=A;DP=109     GT:GQ:DP        1/0:100:23      1/0:44:22       1/0:100:63
+7      22781559        rs2893094       G       A       .       PASS    AA=A;DP=98      GT:GQ:DP        1/0:100:23      1/0:46:18       1/0:100:57
+22     42154562        rs7290966       T       G       .       PASS    AA=G;DP=104     GT:GQ:DP        1/0:100:23      1/0:52:15       1/0:100:66
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+3      1431418 rs11920453      T       C       .       PASS    AA=T;DP=110     GT:GQ:DP        1/0:100:23      1/0:53:26       1/0:100:63
+1      161942265       rs2789905       G       A       .       PASS    AA=N;DP=88      GT:GQ:DP        1/0:100:23      1/0:57:21       1/0:100:31
+2      221286642       rs6705773       T       C       .       PASS    AA=T;DP=106     GT:GQ:DP        1/0:100:23      1/0:59:24       1/0:100:56
+2      36063115        rs2372380       T       G       .       PASS    AA=G;DP=106     GT:GQ:DP        1/0:100:23      1/0:60:22       1/0:100:61
+11     96321919        rs681999        T       A       .       PASS    AA=T;DP=85      GT:GQ:DP        1/0:100:23      1/0:61:16       1/0:100:48
+13     58274144        rs17055484      T       C       .       PASS    AA=T;DP=96      GT:GQ:DP        1/0:100:23      1/0:62:16       1/0:100:54
+4      33466641        rs1822681       G       A       .       PASS    AA=G;DP=91      GT:GQ:DP        1/0:100:23      1/0:65:16       1/0:100:53
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+8      52282297        rs1437595       T       C       .       PASS    AA=T;DP=97      GT:GQ:DP        1/0:100:23      1/0:86:19       1/0:100:55
+9      29189413        rs7856748       G       C       .       PASS    AA=G;DP=100     GT:GQ:DP        1/0:100:23      1/0:87:20       1/0:100:57
+8      81339094        rs10957969      T       G       .       PASS    AA=T;DP=118     GT:GQ:DP        1/0:100:23      1/0:87:23       1/0:100:72
+13     61724101        .       T       C       .       PASS    AA=T;DP=112     GT:GQ:DP        1/0:100:23      1/0:87:30       1/0:100:59
+7      103099481       rs12705138      T       C       .       PASS    AA=C;DP=78      GT:GQ:DP        1/0:100:23      1/0:91:13       1/0:100:44
+5      146414111       rs720303        T       C       .       PASS    AA=C;DP=97      GT:GQ:DP        1/0:100:23      1/0:91:14       1/0:100:56
+6      14688266        rs6459363       G       A       .       PASS    AA=G;DP=113     GT:GQ:DP        1/0:100:23      1/0:91:18       1/0:76:30
+4      116639836       rs10012098      G       A       .       PASS    AA=A;DP=89      GT:GQ:DP        1/0:100:23      1/0:92:13       1/0:100:57
+12     25057914        .       T       A       .       PASS    AA=T;DP=73      GT:GQ:DP        1/0:100:23      1/0:95:17       1/0:100:21
+2      226380532       rs9288611       T       C       .       PASS    AA=T;DP=125     GT:GQ:DP        1/0:100:23      1/0:96:19       1/0:100:83
+2      221927848       rs10168570      G       A       .       PASS    AA=G;DP=95      GT:GQ:DP        1/0:100:23      1/0:96:21       1/0:100:49
+21     19530192        rs2825429       T       C       .       PASS    AA=N;DP=87      GT:GQ:DP        1/0:100:23      1/0:98:15       1/0:100:47
+12     11259920        rs6488361       T       C       .       PASS    AA=T;DP=113     GT:GQ:DP        1/0:100:23      1/0:99:26       1/0:100:67
+7      91419057        rs417   C       A       .       PASS    AA=C;DP=77      GT:GQ:DP        1/0:100:24      1/0:100:15      1/0:100:27
+1      183467684       rs12096987      T       C       .       PASS    AA=C;DP=105;HM2 GT:GQ:DP        1/0:100:24      1/0:100:17      1/0:100:65
+8      71308604        rs2977988       G       C       .       PASS    AA=G;DP=99      GT:GQ:DP        1/0:100:24      1/0:100:19      1/0:100:55
+2      156807097       rs7597551       T       C       .       PASS    AA=T;DP=85      GT:GQ:DP        1/0:100:24      1/0:100:20      1/0:100:41
+5      29246141        rs10472681      G       A       .       PASS    AA=A;DP=102     GT:GQ:DP        1/0:100:24      1/0:100:20      1/0:100:61
+5      15353730        .       T       C       .       PASS    AA=T;DP=92      GT:GQ:DP        1/0:100:24      1/0:100:21      1/0:100:45
+13     102434828       rs9586028       T       A       .       PASS    AA=T;DP=113     GT:GQ:DP        1/0:100:24      1/0:100:21      1/0:100:63
+6      54909135        rs2062781       T       C       .       PASS    AA=C;DP=117     GT:GQ:DP        1/0:100:24      1/0:100:21      1/0:100:69
+3      99384520        rs13085972      G       C       .       PASS    AA=G;DP=114     GT:GQ:DP        1/0:100:24      1/0:100:22      1/0:100:68
+18     51516736        rs9946839       T       C       .       PASS    AA=C;DP=115     GT:GQ:DP        1/0:100:24      1/0:100:23      1/0:100:67
+8      119349825       .       T       C       .       PASS    AA=T;DP=121     GT:GQ:DP        1/0:100:24      1/0:100:23      1/0:100:77
+1      207688310       rs12045481      G       A       .       PASS    AA=G;DP=140;HM2;HM3     GT:GQ:DP        1/0:100:24      1/0:100:25      1/0:100:47
+6      145763055       rs1856262       G       C       .       PASS    AA=C;DP=107     GT:GQ:DP        1/0:100:24      1/0:100:25      1/0:100:57
+4      14239431        rs60838178      T       C       .       PASS    AA=A;DP=128     GT:GQ:DP        1/0:100:24      1/0:100:28      1/0:100:61
+4      103330784       rs6826222       T       A       .       PASS    AA=T;DP=118     GT:GQ:DP        1/0:100:24      1/0:100:28      1/0:100:68
+4      181096143       rs10000486      G       A       .       PASS    AA=G;DP=108     GT:GQ:DP        1/0:100:24      1/0:100:29      1/0:100:54
+10     61774782        rs4582919       T       C       .       PASS    AA=T;DP=108     GT:GQ:DP        1/0:100:24      1/0:100:29      1/0:100:55
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+8      128696613       rs10103860      G       A       .       PASS    AA=G;DP=129     GT:GQ:DP        1/0:100:24      1/0:100:30      1/0:100:74
+1      197715468       rs7529033       G       A       .       PASS    AA=G;DP=131;HM2 GT:GQ:DP        1/0:100:24      1/0:100:36      1/0:100:70
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+6      93066450        rs12525836      G       C       .       PASS    AA=G;DP=91      GT:GQ:DP        1/0:100:24      1/0:13:11       1/0:100:55
+18     60175594        rs28572586      T       A       .       PASS    AA=T;DP=87      GT:GQ:DP        1/0:100:24      1/0:20:17       1/0:100:39
+11     98974767        rs11220589      T       A       .       PASS    AA=T;DP=75      GT:GQ:DP        1/0:100:24      1/0:36:10       1/0:100:41
+20     55895484        rs6015114       T       A       .       PASS    AA=T;DP=107     GT:GQ:DP        1/0:100:24      1/0:42:22       1/0:100:61
+4      113723751       rs6838392       T       C       .       PASS    AA=T;DP=104     GT:GQ:DP        1/0:100:24      1/0:43:19       1/0:100:59
+9      13791600        rs1576067       T       G       .       PASS    AA=G;DP=109     GT:GQ:DP        1/0:100:24      1/0:46:25       1/0:100:58
+5      94061705        rs11955373      G       A       .       PASS    AA=G;DP=99      GT:GQ:DP        1/0:100:24      1/0:50:13       1/0:100:62
+12     16149068        rs2598333       T       A       .       PASS    AA=t;DP=79      GT:GQ:DP        1/0:100:24      1/0:54:16       1/0:100:28
+12     84900940        rs6539935       T       C       .       PASS    AA=C;DP=113     GT:GQ:DP        1/0:100:24      1/0:61:16       1/0:100:71
+7      101703860       rs712838        G       A       .       PASS    AA=G;DP=111     GT:GQ:DP        1/0:100:24      1/0:62:15       1/0:100:74
+1      105300102       rs12029779      G       A       .       PASS    AA=G;DP=69;HM2  GT:GQ:DP        1/0:100:24      1/0:64:13       1/0:100:24
+4      164481749       rs4487297       T       C       .       PASS    AA=T;DP=80      GT:GQ:DP        1/0:100:24      1/0:69:16       1/0:100:41
+2      194322166       rs4850479       T       C       .       PASS    AA=T;DP=128     GT:GQ:DP        1/0:100:24      1/0:72:24       1/0:100:82
+7      70450849        rs2527308       T       C       .       PASS    AA=t;DP=89      GT:GQ:DP        1/0:100:24      1/0:76:14       1/0:100:51
+13     91047818        rs8002472       C       A       .       PASS    AA=C;DP=125     GT:GQ:DP        1/0:100:24      1/0:78:18       1/0:100:82
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+8      138628068       rs7827231       G       A       .       PASS    AA=A;DP=84      GT:GQ:DP        1/0:100:24      1/0:86:13       1/0:100:47
+2      40588234        rs13029763      C       A       .       PASS    AA=A;DP=113     GT:GQ:DP        1/0:100:24      1/0:89:26       1/0:100:62
+2      137908941       rs10192668      T       C       .       PASS    AA=T;DP=97      GT:GQ:DP        1/0:100:24      1/0:91:25       1/0:100:38
+4      113524261       rs4833406       G       A       .       PASS    AA=G;DP=113     GT:GQ:DP        1/0:100:24      1/0:99:19       1/0:100:70
+18     57924490        rs9319996       T       A       .       PASS    AA=A;DP=121     GT:GQ:DP        1/0:100:24      1/0:99:22       1/0:100:72
+9      8045157 rs1575324       G       A       .       PASS    AA=A;DP=103     GT:GQ:DP        1/0:100:25      1/0:100:16      1/0:100:59
+2      123640090       rs12711622      G       A       .       PASS    AA=G;DP=112     GT:GQ:DP        1/0:100:25      1/0:100:17      1/0:100:28
+6      92297177        rs4235850       T       A       .       PASS    AA=A;DP=91      GT:GQ:DP        1/0:100:25      1/0:100:17      1/0:100:48
+4      18380727        rs7677013       G       A       .       PASS    AA=g;DP=103     GT:GQ:DP        1/0:100:25      1/0:100:19      1/0:100:57
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+18     59079321        rs8088662       T       C       .       PASS    AA=C;DP=131     GT:GQ:DP        1/0:100:25      1/0:100:22      1/0:100:85
+15     85706049        .       T       C       .       PASS    AA=T;DP=95      GT:GQ:DP        1/0:100:25      1/0:100:23      1/0:100:46
+16     50081953        .       G       A       .       PASS    AA=G;DP=118     GT:GQ:DP        1/0:100:25      1/0:100:24      1/0:100:69
+15     91786673        rs12898974      G       C       .       PASS    AA=C;DP=119     GT:GQ:DP        1/0:100:25      1/0:100:24      1/0:100:72
+8      106607227       rs1450164       T       C       .       PASS    AA=T;DP=93      GT:GQ:DP        1/0:100:25      1/0:100:25      1/0:100:42
+7      144000389       rs6968218       G       A       .       PASS    AA=G;DP=106     GT:GQ:DP        1/0:100:25      1/0:100:25      1/0:100:55
+20     11026406        rs2207315       T       C       .       PASS    AA=C;DP=121     GT:GQ:DP        1/0:100:25      1/0:100:26      1/0:100:72
+8      142826268       .       T       C       .       PASS    AA=T;DP=121     GT:GQ:DP        1/0:100:25      1/0:100:27      1/0:100:69
+4      21626265        rs13125289      G       A       .       PASS    AA=A;DP=111     GT:GQ:DP        1/0:100:25      1/0:100:29      1/0:100:56
+5      179391546       rs10078845      T       A       .       PASS    AA=T;DP=117     GT:GQ:DP        1/0:100:25      1/0:100:29      1/0:100:58
+10     16198686        rs11253799      G       A       .       PASS    AA=N;DP=124     GT:GQ:DP        1/0:100:25      1/0:100:29      1/0:100:69
+16     79575834        rs16954396      T       C       .       PASS    AA=T;DP=116     GT:GQ:DP        1/0:100:25      1/0:100:30      1/0:100:61
+10     19877770        rs60371835      T       C       .       PASS    AA=T;DP=144     GT:GQ:DP        1/0:100:25      1/0:100:31      1/0:100:89
+10     14011832        rs2610792       G       A       .       PASS    AA=G;DP=119     GT:GQ:DP        1/0:100:25      1/0:100:33      1/0:100:60
+15     95640985        rs2895465       C       A       .       PASS    AA=A;DP=112     GT:GQ:DP        1/0:100:25      1/0:38:27       1/0:100:60
+1      239255003       rs680449        C       A       .       PASS    AA=A;DP=106;HM3 GT:GQ:DP        1/0:100:25      1/0:40:18       1/0:100:63
+8      91501384        rs11994061      G       A       .       PASS    AA=g;DP=110     GT:GQ:DP        1/0:100:25      1/0:4:27        1/0:100:55
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+6      132860163       rs2788939       T       C       .       PASS    AA=T;DP=92      GT:GQ:DP        1/0:100:25      1/0:50:18       1/0:100:48
+19     3526422 rs10420721      T       C       .       PASS    AA=T;DP=105     GT:GQ:DP        1/0:100:25      1/0:54:11       1/0:100:71
+15     38697999        rs12914743      T       C       .       PASS    AA=T;DP=85      GT:GQ:DP        1/0:100:25      1/0:54:15       1/0:100:46
+18     52143189        rs7240719       T       C       .       PASS    AA=t;DP=117     GT:GQ:DP        1/0:100:25      1/0:55:24       1/0:100:67
+6      101827512       rs546176        T       C       .       PASS    AA=T;DP=93      GT:GQ:DP        1/0:100:25      1/0:58:14       1/0:100:58
+15     53536362        .       G       C       .       PASS    AA=G;DP=99      GT:GQ:DP        1/0:100:25      1/0:59:17       1/0:100:57
+12     29566674        rs299431        T       C       .       PASS    AA=T;DP=107     GT:GQ:DP        1/0:100:25      1/0:65:18       1/0:100:65
+9      1714823 rs576652        G       A       .       PASS    AA=A;DP=113     GT:GQ:DP        1/0:100:25      1/0:66:18       1/0:100:66
+5      130809238       rs7711311       G       A       .       PASS    AA=A;DP=105     GT:GQ:DP        1/0:100:25      1/0:71:19       1/0:100:63
+14     45715230        .       G       A       .       PASS    AA=G;DP=127     GT:GQ:DP        1/0:100:25      1/0:74:25       1/0:100:68
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+13     70142290        rs9572529       T       C       .       PASS    AA=T;DP=96      GT:GQ:DP        1/0:100:25      1/0:77:13       1/0:100:57
+5      124659904       rs930415        G       A       .       PASS    AA=A;DP=106     GT:GQ:DP        1/0:100:25      1/0:82:14       1/0:100:66
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+20     22587632        rs4815131       T       C       .       PASS    AA=N;DP=129     GT:GQ:DP        1/0:100:25      1/0:85:19       1/0:100:67
+5      18529832        rs7705147       G       A       .       PASS    AA=A;DP=105     GT:GQ:DP        1/0:100:25      1/0:85:20       1/0:100:62
+1      208571443       .       T       C       .       PASS    AA=T;DP=106     GT:GQ:DP        1/0:100:25      1/0:85:21       1/0:100:61
+7      136892181       rs1646385       T       G       .       PASS    AA=T;DP=100     GT:GQ:DP        1/0:100:25      1/0:87:14       1/0:100:60
+18     71959787        rs2243850       C       A       .       PASS    AA=A;DP=107     GT:GQ:DP        1/0:100:25      1/0:88:21       1/0:100:62
+17     75678998        rs9905685       G       C       .       PASS    AA=G;DP=113     GT:GQ:DP        1/0:100:25      1/0:89:22       1/0:100:66
+4      4298104 rs12512067      G       A       .       PASS    AA=A;DP=132     GT:GQ:DP        1/0:100:25      1/0:90:25       1/0:100:81
+20     30765599        rs28728231      C       A       .       PASS    AA=C;DP=111     GT:GQ:DP        1/0:100:25      1/0:91:17       1/0:75:69
+14     26664390        rs8018244       T       A       .       PASS    AA=T;DP=99      GT:GQ:DP        1/0:100:25      1/0:92:16       1/0:100:52
+10     57256191        rs4304686       G       A       .       PASS    AA=G;DP=92      GT:GQ:DP        1/0:100:25      1/0:92:25       1/0:100:43
+7      115097751       rs7806735       T       C       .       PASS    AA=T;DP=125     GT:GQ:DP        1/0:100:25      1/0:92:29       1/0:100:69
+12     104560423       rs12317480      T       G       .       PASS    AA=T;DP=113     GT:GQ:DP        1/0:100:25      1/0:95:21       1/0:100:69
+10     67662077        rs1979362       G       A       .       PASS    AA=A;DP=84      GT:GQ:DP        1/0:100:25      1/0:97:16       1/0:100:44
+3      150323884       rs2176753       T       G       .       PASS    AA=T;DP=102     GT:GQ:DP        1/0:100:25      1/0:97:18       1/0:100:17
+15     68719714        rs2162554       T       C       .       PASS    AA=t;DP=121     GT:GQ:DP        1/0:100:25      1/0:99:25       1/0:100:73
+20     3291308 rs6115861       G       A       .       PASS    AA=G;DP=98      GT:GQ:DP        1/0:100:25      1/0:9:12        1/0:100:60
+16     47776985        rs7187779       T       C       .       PASS    AA=C;DP=100     GT:GQ:DP        1/0:100:26      1/0:100:18      1/0:100:55
+4      96055767        rs7661079       T       A       .       PASS    AA=T;DP=103     GT:GQ:DP        1/0:100:26      1/0:100:19      1/0:100:56
+17     76381059        rs8069962       G       A       .       PASS    AA=G;DP=115     GT:GQ:DP        1/0:100:26      1/0:100:19      1/0:100:71
+5      123993532       rs4311413       T       A       .       PASS    AA=A;DP=112     GT:GQ:DP        1/0:100:26      1/0:100:20      1/0:100:66
+22     25775437        rs738161        C       A       .       PASS    AA=A;DP=120     GT:GQ:DP        1/0:100:26      1/0:100:20      1/0:100:73
+5      160944121       rs1444730       T       G       .       PASS    AA=T;DP=114     GT:GQ:DP        1/0:100:26      1/0:100:21      1/0:100:68
+12     79359984        rs11838287      C       A       .       PASS    AA=C;DP=114     GT:GQ:DP        1/0:100:26      1/0:100:21      1/0:100:70
+3      165755108       rs12633984      T       C       .       PASS    AA=T;DP=117     GT:GQ:DP        1/0:100:26      1/0:100:22      1/0:100:66
+2      22676161        rs2049730       G       A       .       PASS    AA=G;DP=142     GT:GQ:DP        1/0:100:26      1/0:100:23      1/0:100:48
+2      166632718       rs1461197       G       A       .       PASS    AA=A;DP=135     GT:GQ:DP        1/0:100:26      1/0:100:23      1/0:100:86
+3      107573064       .       T       C       .       PASS    AA=C;DP=96      GT:GQ:DP        1/0:100:26      1/0:100:24      1/0:100:32
+5      20416904        .       C       A       .       PASS    AA=C;DP=112     GT:GQ:DP        1/0:100:26      1/0:100:24      1/0:100:62
+5      80481924        rs248990        G       A       .       PASS    AA=A;DP=133     GT:GQ:DP        1/0:100:26      1/0:100:24      1/0:100:84
+4      88972828        rs17013206      T       C       .       PASS    AA=T;DP=97      GT:GQ:DP        1/0:100:26      1/0:100:25      1/0:100:47
+18     66948511        rs7227963       T       G       .       PASS    AA=T;DP=115     GT:GQ:DP        1/0:100:26      1/0:100:25      1/0:100:65
+9      14365058        rs61265825      G       C       .       PASS    AA=G;DP=126     GT:GQ:DP        1/0:100:26      1/0:100:25      1/0:100:75
+8      122192541       rs4871160       T       C       .       PASS    AA=t;DP=108     GT:GQ:DP        1/0:100:26      1/0:100:26      1/0:100:56
+9      8816588 rs10120450      T       C       .       PASS    AA=T;DP=122     GT:GQ:DP        1/0:100:26      1/0:100:31      1/0:100:64
+17     13468459        .       T       A       .       PASS    AA=T;DP=146     GT:GQ:DP        1/0:100:26      1/0:100:33      1/0:100:90
+12     66214616        rs10784632      T       G       .       PASS    AA=G;DP=140     GT:GQ:DP        1/0:100:26      1/0:100:39      1/0:100:76
+2      65505355        rs12470883      G       A       .       PASS    AA=G;DP=99      GT:GQ:DP        1/0:100:26      1/0:37:13       1/0:100:58
+4      186732865       rs10013457      G       A       .       PASS    AA=G;DP=98      GT:GQ:DP        1/0:100:26      1/0:43:11       1/0:100:63
+1      214563570       rs1805050       G       A       .       PASS    AA=G;DP=114;HM2;HM3     GT:GQ:DP        1/0:100:26      1/0:43:20       1/0:100:69
+2      222212390       rs2392935       G       A       .       PASS    AA=G;DP=121     GT:GQ:DP        1/0:100:26      1/0:47:21       1/0:100:78
+1      14353647        rs6683667       T       C       .       PASS    AA=C;DP=95      GT:GQ:DP        1/0:100:26      1/0:51:11       1/0:100:59
+12     95428031        .       G       A       .       PASS    AA=G;DP=101     GT:GQ:DP        1/0:100:26      1/0:52:21       1/0:100:53
+20     47056828        .       T       G       .       PASS    AA=T;DP=93      GT:GQ:DP        1/0:100:26      1/0:55:17       1/0:100:50
+6      6527000 rs2026487       T       C       .       PASS    AA=T;DP=119     GT:GQ:DP        1/0:100:26      1/0:55:21       1/0:100:68
+16     26243320        rs8048431       C       A       .       PASS    AA=C;DP=117     GT:GQ:DP        1/0:100:26      1/0:70:16       1/0:100:75
+11     28908144        rs2959110       G       C       .       PASS    AA=G;DP=92      GT:GQ:DP        1/0:100:26      1/0:72:14       1/0:100:54
+13     89357548        rs7321580       T       G       .       PASS    AA=T;DP=84      GT:GQ:DP        1/0:100:26      1/0:72:16       1/0:100:42
+1      245378481       rs57793630      T       C       .       PASS    AA=C;DP=118     GT:GQ:DP        1/0:100:26      1/0:72:18       1/0:100:74
+9      107596496       rs13283916      G       C       .       PASS    AA=G;DP=93      GT:GQ:DP        1/0:100:26      1/0:75:16       1/0:100:37
+8      87001701        rs1834635       T       C       .       PASS    AA=C;DP=117     GT:GQ:DP        1/0:100:26      1/0:76:20       1/0:100:74
+7      39006514        .       G       A       .       PASS    AA=G;DP=114     GT:GQ:DP        1/0:100:26      1/0:77:15       1/0:100:74
+10     3506061 rs11251907      G       C       .       PASS    AA=G;DP=121     GT:GQ:DP        1/0:100:26      1/0:78:26       1/0:100:68
+1      150968300       rs1571914       T       C       .       PASS    AA=T;DP=109;HM2;HM3     GT:GQ:DP        1/0:100:26      1/0:79:20       1/0:100:62
+6      37733668        rs13198513      T       C       .       PASS    AA=C;DP=145     GT:GQ:DP        1/0:100:26      1/0:79:20       1/0:100:99
+4      161840767       rs10012767      G       A       .       PASS    AA=G;DP=126     GT:GQ:DP        1/0:100:26      1/0:79:22       1/0:100:33
+11     88264534        rs644251        T       C       .       PASS    AA=T;DP=95      GT:GQ:DP        1/0:100:26      1/0:7:20        1/0:100:51
+13     53856599        rs9536700       T       G       .       PASS    AA=G;DP=79      GT:GQ:DP        1/0:100:26      1/0:80:20       1/0:100:28
+18     70512883        rs571832        G       A       .       PASS    AA=A;DP=118     GT:GQ:DP        1/0:100:26      1/0:81:27       1/0:100:66
+1      64554997        rs2020304       G       A       .       PASS    AA=G;DP=134;HM2 GT:GQ:DP        1/0:100:26      1/0:83:25       1/0:100:83
+7      68476350        rs2938499       G       A       .       PASS    AA=G;DP=122     GT:GQ:DP        1/0:100:26      1/0:84:16       1/0:100:82
+8      8724255 rs3789850       C       A       .       PASS    AA=A;DP=142     GT:GQ:DP        1/0:100:26      1/0:87:21       1/0:100:55
+19     36713910        rs3885120       T       C       .       PASS    AA=C;DP=118     GT:GQ:DP        1/0:100:26      1/0:90:18       1/0:100:76
+3      8018153 .       T       C       .       PASS    AA=T;DP=139     GT:GQ:DP        1/0:100:26      1/0:90:23       1/0:100:87
+3      131142364       rs9839577       G       A       .       PASS    AA=G;DP=98      GT:GQ:DP        1/0:100:26      1/0:91:16       1/0:100:56
+13     58025636        rs12871847      G       A       .       PASS    AA=G;DP=90      GT:GQ:DP        1/0:100:26      1/0:91:17       1/0:100:24
+2      102463127       rs6543146       T       G       .       PASS    AA=G;DP=73      GT:GQ:DP        1/0:100:26      1/0:92:17       1/0:100:18
+10     124024769       rs7097124       G       A       .       PASS    AA=g;DP=92      GT:GQ:DP        1/0:100:26      1/0:92:21       1/0:100:45
+6      122397582       rs2816131       G       A       .       PASS    AA=A;DP=99      GT:GQ:DP        1/0:100:26      1/0:92:21       1/0:100:52
+18     5990569 .       T       A       .       PASS    AA=T;DP=92      GT:GQ:DP        1/0:100:26      1/0:94:20       1/0:100:41
+3      26459579        rs57213363      G       A       .       PASS    AA=A;DP=129     GT:GQ:DP        1/0:100:26      1/0:95:22       1/0:100:84
+3      141096605       rs12495959      T       A       .       PASS    AA=A;DP=129     GT:GQ:DP        1/0:100:26      1/0:97:15       1/0:100:46
+16     5136263 rs4306511       G       C       .       PASS    AA=C;DP=122     GT:GQ:DP        1/0:100:26      1/0:97:20       1/0:100:78
+10     2686431 rs10794931      C       A       .       PASS    AA=A;DP=122     GT:GQ:DP        1/0:100:26      1/0:99:18       1/0:100:34
+4      28859750        rs60698341      G       A       .       PASS    AA=G;DP=105     GT:GQ:DP        1/0:100:27      1/0:100:17      1/0:100:61
+4      115828103       rs6834036       T       C       .       PASS    AA=T;DP=116     GT:GQ:DP        1/0:100:27      1/0:100:21      1/0:100:69
+20     43173904        rs2157360       G       C       .       PASS    AA=C;DP=132     GT:GQ:DP        1/0:100:27      1/0:100:21      1/0:100:83
+17     43799609        rs7210708       T       A       .       PASS    AA=T;DP=108     GT:GQ:DP        1/0:100:27      1/0:100:22      1/0:100:61
+3      12125852        rs160211        G       A       .       PASS    AA=A;DP=110     GT:GQ:DP        1/0:100:27      1/0:100:22      1/0:100:62
+1      84677442        rs7515964       T       C       .       PASS    AA=T;DP=112     GT:GQ:DP        1/0:100:27      1/0:100:23      1/0:100:63
+11     68633163        rs1551304       T       C       .       PASS    AA=C;DP=146     GT:GQ:DP        1/0:100:27      1/0:100:23      1/0:100:95
+1      34523978        rs1342155       C       A       .       PASS    AA=A;DP=108;HM2 GT:GQ:DP        1/0:100:27      1/0:100:24      1/0:100:56
+3      111820872       rs986206        T       A       .       PASS    AA=T;DP=120     GT:GQ:DP        1/0:100:27      1/0:100:25      1/0:100:67
+6      66659483        rs2351720       G       A       .       PASS    AA=A;DP=125     GT:GQ:DP        1/0:100:27      1/0:100:25      1/0:100:72
+8      124008453       rs7816289       T       C       .       PASS    AA=T;DP=130     GT:GQ:DP        1/0:100:27      1/0:100:26      1/0:100:39
+7      111123667       rs17158740      G       A       .       PASS    AA=A;DP=127     GT:GQ:DP        1/0:100:27      1/0:100:26      1/0:100:76
+7      95702044        rs6957975       T       C       .       PASS    AA=C;DP=111     GT:GQ:DP        1/0:100:27      1/0:100:27      1/0:100:59
+12     41581334        rs12315537      C       A       .       PASS    AA=A;DP=133     GT:GQ:DP        1/0:100:27      1/0:100:28      1/0:100:65
+7      48056096        rs2708890       C       A       .       PASS    AA=C;DP=135     GT:GQ:DP        1/0:100:27      1/0:100:28      1/0:100:79
+8      131975820       rs10956558      C       A       .       PASS    AA=N;DP=133     GT:GQ:DP        1/0:100:27      1/0:100:28      1/0:100:79
+15     33090356        rs8042678       T       C       .       PASS    AA=C;DP=144     GT:GQ:DP        1/0:100:27      1/0:100:30      1/0:100:89
+3      12559005        rs11710908      G       A       .       PASS    AA=G;DP=147     GT:GQ:DP        1/0:100:27      1/0:100:31      1/0:100:48
+15     37384326        rs7171648       T       C       .       PASS    AA=T;DP=137     GT:GQ:DP        1/0:100:27      1/0:100:31      1/0:100:79
+20     9781733 .       G       A       .       PASS    AA=G;DP=148     GT:GQ:DP        1/0:100:27      1/0:100:33      1/0:100:47
+2      162217485       rs6432699       C       A       .       PASS    AA=C;DP=138     GT:GQ:DP        1/0:100:27      1/0:100:33      1/0:100:81
+13     101241759       rs9557737       T       C       .       PASS    AA=C;DP=125     GT:GQ:DP        1/0:100:27      1/0:100:34      1/0:100:58
+6      6185102 rs1742920       G       A       .       PASS    AA=G;DP=140     GT:GQ:DP        1/0:100:27      1/0:100:36      1/0:100:77
+6      63605468        rs6917266       T       A       .       PASS    AA=t;DP=85      GT:GQ:DP        1/0:100:27      1/0:27:11       1/0:100:37
+18     72452017        rs9954539       C       A       .       PASS    AA=A;DP=88      GT:GQ:DP        1/0:100:27      1/0:29:11       1/0:100:36
+10     122827695       rs2420912       G       C       .       PASS    AA=G;DP=112     GT:GQ:DP        1/0:100:27      1/0:31:24       1/0:100:62
+4      16694305        rs28483930      G       A       .       PASS    AA=A;DP=87      GT:GQ:DP        1/0:100:27      1/0:38:11       1/0:100:49
+1      162005574       rs3845534       G       A       .       PASS    AA=G;DP=114;HM2 GT:GQ:DP        1/0:100:27      1/0:39:15       1/0:100:73
+11     119116558       rs11217440      G       A       .       PASS    AA=A;DP=105     GT:GQ:DP        1/0:100:27      1/0:40:12       1/0:100:62
+3      57100767        rs11927968      T       A       .       PASS    AA=T;DP=107     GT:GQ:DP        1/0:100:27      1/0:42:16       1/0:100:64
+10     36722008        rs59175361      C       A       .       PASS    AA=A;DP=100     GT:GQ:DP        1/0:100:27      1/0:42:18       1/0:100:54
+6      164672466       rs9459066       G       A       .       PASS    AA=A;DP=92      GT:GQ:DP        1/0:100:27      1/0:44:16       1/0:100:50
+13     23875790        rs61089957      T       A       .       PASS    AA=t;DP=94      GT:GQ:DP        1/0:100:27      1/0:49:14       1/0:100:56
+2      1065751 rs10188332      T       C       .       PASS    AA=C;DP=84      GT:GQ:DP        1/0:100:27      1/0:50:7        1/0:100:46
+13     70021645        rs9564714       G       A       .       PASS    AA=G;DP=119     GT:GQ:DP        1/0:100:27      1/0:52:24       1/0:100:69
+4      186006118       rs2046812       G       A       .       PASS    AA=A;DP=99      GT:GQ:DP        1/0:100:27      1/0:54:12       1/0:100:60
+13     89015014        rs7981794       G       A       .       PASS    AA=g;DP=132     GT:GQ:DP        1/0:100:27      1/0:58:36       1/0:100:71
+2      80063366        rs6756771       T       C       .       PASS    AA=C;DP=96      GT:GQ:DP        1/0:100:27      1/0:60:22       1/0:100:48
+4      23324080        rs1021401       T       C       .       PASS    AA=C;DP=97      GT:GQ:DP        1/0:100:27      1/0:62:23       1/0:100:43
+9      103541388       rs2067056       T       C       .       PASS    AA=T;DP=133     GT:GQ:DP        1/0:100:27      1/0:62:28       1/0:100:78
+3      171670709       rs57670513      T       C       .       PASS    AA=T;DP=107     GT:GQ:DP        1/0:100:27      1/0:64:20       1/0:100:59
+6      36943527        rs12529769      G       A       .       PASS    AA=g;DP=110     GT:GQ:DP        1/0:100:27      1/0:65:17       1/0:100:64
+4      146891420       rs11734721      T       G       .       PASS    AA=T;DP=92      GT:GQ:DP        1/0:100:27      1/0:66:20       1/0:100:47
+7      8653521 rs2349502       T       G       .       PASS    AA=N;DP=115     GT:GQ:DP        1/0:100:27      1/0:66:20       1/0:100:63
+18     50835453        rs949026        T       A       .       PASS    AA=T;DP=101     GT:GQ:DP        1/0:100:27      1/0:67:18       1/0:100:55
+12     92156035        rs7306971       G       C       .       PASS    AA=C;DP=133     GT:GQ:DP        1/0:100:27      1/0:70:21       1/0:100:83
+7      15384155        .       T       C       .       PASS    AA=T;DP=88      GT:GQ:DP        1/0:100:27      1/0:74:13       1/0:100:49
+18     21230059        rs4310950       C       A       .       PASS    AA=C;DP=119     GT:GQ:DP        1/0:100:27      1/0:78:28       1/0:100:63
+5      148129547       rs6874997       T       C       .       PASS    AA=T;DP=110     GT:GQ:DP        1/0:100:27      1/0:80:22       1/0:100:60
+8      93389511        rs10092275      G       A       .       PASS    AA=A;DP=106     GT:GQ:DP        1/0:100:27      1/0:83:17       1/0:100:62
+1      53266128        rs17107639      T       C       .       PASS    AA=T;DP=105;HM2 GT:GQ:DP        1/0:100:27      1/0:87:20       1/0:100:60
+11     32963158        rs9919531       T       C       .       PASS    AA=T;DP=111     GT:GQ:DP        1/0:100:27      1/0:87:21       1/0:100:66
+12     22297684        .       G       A       .       PASS    AA=G;DP=137     GT:GQ:DP        1/0:100:27      1/0:91:28       1/0:100:81
+8      58837720        rs13439668      T       G       .       PASS    AA=T;DP=113     GT:GQ:DP        1/0:100:27      1/0:92:18       1/0:100:68
+18     37703653        rs6507447       C       A       .       PASS    AA=A;DP=115     GT:GQ:DP        1/0:100:27      1/0:96:18       1/0:100:67
+13     61357597        rs9539355       T       G       .       PASS    AA=T;DP=110     GT:GQ:DP        1/0:100:27      1/0:97:22       1/0:100:61
+17     11177516        rs205037        T       A       .       PASS    AA=A;DP=133     GT:GQ:DP        1/0:100:27      1/0:97:23       1/0:100:83
+10     100328917       rs7101349       T       C       .       PASS    AA=C;DP=106     GT:GQ:DP        1/0:100:28      1/0:100:19      1/0:100:58
+6      76949380        rs1032153       T       C       .       PASS    AA=C;DP=99      GT:GQ:DP        1/0:100:28      1/0:100:21      1/0:100:49
+4      96992942        .       C       A       .       PASS    AA=C;DP=98      GT:GQ:DP        1/0:100:28      1/0:100:22      1/0:100:47
+20     52011821        rs393744        T       C       .       PASS    AA=C;DP=118     GT:GQ:DP        1/0:100:28      1/0:100:23      1/0:100:67
+20     42007236        rs6031252       C       A       .       PASS    AA=A;DP=132     GT:GQ:DP        1/0:100:28      1/0:100:23      1/0:100:77
+14     39645140        rs61458052      T       C       .       PASS    AA=T;DP=103     GT:GQ:DP        1/0:100:28      1/0:100:24      1/0:100:51
+9      72642865        rs1890017       G       A       .       PASS    AA=g;DP=102     GT:GQ:DP        1/0:100:28      1/0:100:25      1/0:100:48
+1      235295527       rs6673755       T       C       .       PASS    AA=t;DP=118;HM2 GT:GQ:DP        1/0:100:28      1/0:100:25      1/0:100:67
+9      103493366       rs2485521       G       A       .       PASS    AA=G;DP=126     GT:GQ:DP        1/0:100:28      1/0:100:25      1/0:100:72
+20     20736104        rs2328561       G       C       .       PASS    AA=C;DP=127     GT:GQ:DP        1/0:100:28      1/0:100:25      1/0:100:76
+17     68296480        .       C       A       .       PASS    AA=A;DP=155     GT:GQ:DP        1/0:100:28      1/0:100:26      1/0:100:101
+6      17602082        rs12190896      G       A       .       PASS    AA=G;DP=129     GT:GQ:DP        1/0:100:28      1/0:100:26      1/0:100:76
+8      118548282       rs1387435       G       C       .       PASS    AA=G;DP=144     GT:GQ:DP        1/0:100:28      1/0:100:27      1/0:100:43
+7      124360152       rs10264766      T       A       .       PASS    AA=T;DP=107     GT:GQ:DP        1/0:100:28      1/0:100:27      1/0:100:52
+11     23768349        .       G       A       .       PASS    AA=.;DP=140     GT:GQ:DP        1/0:100:28      1/0:100:28      1/0:100:80
+14     81775017        .       G       A       .       PASS    AA=G;DP=111     GT:GQ:DP        1/0:100:28      1/0:100:29      1/0:100:46
+5      11730028        rs10040329      T       C       .       PASS    AA=T;DP=122     GT:GQ:DP        1/0:100:28      1/0:100:32      1/0:100:61
+15     56380858        rs28697198      C       A       .       PASS    AA=C;DP=142     GT:GQ:DP        1/0:100:28      1/0:100:32      1/0:100:82
+6      74911975        rs1934011       G       C       .       PASS    AA=C;DP=150     GT:GQ:DP        1/0:100:28      1/0:100:35      1/0:100:90
+10     6445540 rs11258303      C       A       .       PASS    AA=C;DP=163     GT:GQ:DP        1/0:100:28      1/0:100:43      1/0:100:95
+11     36191160        rs12225447      G       C       .       PASS    AA=g;DP=94      GT:GQ:DP        1/0:100:28      1/0:11:12       1/0:100:54
+1      14957497        rs10754868      G       C       .       PASS    AA=C;DP=92      GT:GQ:DP        1/0:100:28      1/0:27:14       1/0:100:50
+12     80858725        rs10862398      T       C       .       PASS    AA=t;DP=111     GT:GQ:DP        1/0:100:28      1/0:37:19       1/0:100:64
+13     23940210        rs9634401       T       C       .       PASS    AA=T;DP=93      GT:GQ:DP        1/0:100:28      1/0:40:10       1/0:100:42
+2      213252182       rs56314123      T       A       .       PASS    AA=A;DP=105     GT:GQ:DP        1/0:100:28      1/0:48:19       1/0:100:57
+1      95020029        rs7548885       T       C       .       PASS    AA=C;DP=110;HM2;HM3     GT:GQ:DP        1/0:100:28      1/0:50:20       1/0:100:62
+11     61810024        rs7117883       G       A       .       PASS    AA=g;DP=111     GT:GQ:DP        1/0:100:28      1/0:53:17       1/0:100:66
+2      181844623       rs6706833       G       A       .       PASS    AA=A;DP=96      GT:GQ:DP        1/0:100:28      1/0:57:19       1/0:100:50
+8      127548465       rs34560901      G       A       .       PASS    AA=G;DP=107     GT:GQ:DP        1/0:100:28      1/0:58:11       1/0:100:69
+10     124311088       rs11499292      C       A       .       PASS    AA=C;DP=97      GT:GQ:DP        1/0:100:28      1/0:58:17       1/0:100:51
+1      46590806        .       T       G       .       PASS    AA=G;DP=125     GT:GQ:DP        1/0:100:28      1/0:58:22       1/0:100:78
+14     79356147        rs2242643       T       C       .       PASS    AA=T;DP=123     GT:GQ:DP        1/0:100:28      1/0:60:21       1/0:100:76
+4      189422705       rs10002720      C       A       .       PASS    AA=C;DP=120     GT:GQ:DP        1/0:100:28      1/0:62:15       1/0:100:76
+2      211399162       rs7592237       T       C       .       PASS    AA=T;DP=97      GT:GQ:DP        1/0:100:28      1/0:63:18       1/0:100:52
+20     55599939        rs2865393       G       A       .       PASS    AA=G;DP=106     GT:GQ:DP        1/0:100:28      1/0:71:18       1/0:100:60
+3      181719273       .       T       A       .       PASS    AA=A;DP=112     GT:GQ:DP        1/0:100:28      1/0:71:19       1/0:100:68
+1      11215539        rs2746640       T       A       .       PASS    AA=A;DP=99      GT:GQ:DP        1/0:100:28      1/0:71:22       1/0:100:41
+4      154241515       rs1588982       T       C       .       PASS    AA=t;DP=143     GT:GQ:DP        1/0:100:28      1/0:73:29       1/0:100:87
+12     61755158        rs11174764      T       C       .       PASS    AA=T;DP=112     GT:GQ:DP        1/0:100:28      1/0:75:20       1/0:100:65
+20     15619144        rs7261305       G       C       .       PASS    AA=C;DP=118     GT:GQ:DP        1/0:100:28      1/0:75:24       1/0:100:67
+8      133483293       rs2673601       G       A       .       PASS    AA=G;DP=108     GT:GQ:DP        1/0:100:28      1/0:77:20       1/0:100:57
+3      59257705        rs12634846      G       A       .       PASS    AA=A;DP=112     GT:GQ:DP        1/0:100:28      1/0:78:15       1/0:100:68
+3      29792507        rs4610189       T       G       .       PASS    AA=G;DP=109     GT:GQ:DP        1/0:100:28      1/0:79:21       1/0:100:41
+4      143618651       rs7662794       T       C       .       PASS    AA=C;DP=99      GT:GQ:DP        1/0:100:28      1/0:80:17       1/0:100:39
+10     112232528       rs56170699      T       C       .       PASS    AA=C;DP=114     GT:GQ:DP        1/0:100:28      1/0:80:18       1/0:100:69
+3      145113082       rs12496928      G       A       .       PASS    AA=G;DP=104     GT:GQ:DP        1/0:100:28      1/0:80:21       1/0:100:53
+4      4786893 .       T       C       .       PASS    AA=T;DP=127     GT:GQ:DP        1/0:100:28      1/0:81:27       1/0:100:74
+6      24576956        rs9467183       T       C       .       PASS    AA=C;DP=95      GT:GQ:DP        1/0:100:28      1/0:83:15       1/0:100:45
+8      130251874       rs6470699       G       A       .       PASS    AA=G;DP=119     GT:GQ:DP        1/0:100:28      1/0:83:22       1/0:100:69
+12     22650043        rs11046489      T       C       .       PASS    AA=T;DP=105     GT:GQ:DP        1/0:100:28      1/0:85:21       1/0:100:56
+12     79565349        rs1163027       G       A       .       PASS    AA=A;DP=139     GT:GQ:DP        1/0:100:28      1/0:85:25       1/0:100:43
+18     71696896        rs930951        G       A       .       PASS    AA=G;DP=113     GT:GQ:DP        1/0:100:28      1/0:89:22       1/0:100:63
+4      142895952       rs2008563       G       A       .       PASS    AA=A;DP=89      GT:GQ:DP        1/0:100:28      1/0:89:26       1/0:100:26
+13     105248408       rs9583043       G       A       .       PASS    AA=G;DP=123     GT:GQ:DP        1/0:100:28      1/0:92:35       1/0:100:58
+2      217976127       rs59253096      T       C       .       PASS    AA=T;DP=96      GT:GQ:DP        1/0:100:28      1/0:94:23       1/0:100:32
+11     75216440        rs11236545      G       C       .       PASS    AA=G;DP=108     GT:GQ:DP        1/0:100:28      1/0:95:17       1/0:100:63
+2      12730862        rs58091949      T       C       .       PASS    AA=T;DP=104     GT:GQ:DP        1/0:100:29      1/0:100:15      1/0:100:59
+7      106740428       rs6977966       G       C       .       PASS    AA=G;DP=115     GT:GQ:DP        1/0:100:29      1/0:100:16      1/0:100:67
+4      92147510        rs28811665      T       C       .       PASS    AA=T;DP=99      GT:GQ:DP        1/0:100:29      1/0:100:17      1/0:100:54
+15     23953448        rs4906865       G       C       .       PASS    AA=C;DP=150     GT:GQ:DP        1/0:100:29      1/0:100:19      1/0:100:49
+13     76177256        .       T       C       .       PASS    AA=T;DP=124     GT:GQ:DP        1/0:100:29      1/0:100:20      1/0:100:75
+8      89515796        rs6980734       G       A       .       PASS    AA=G;DP=101     GT:GQ:DP        1/0:100:29      1/0:100:23      1/0:100:50
+13     67412525        rs9592538       T       G       .       PASS    AA=G;DP=118     GT:GQ:DP        1/0:100:29      1/0:100:23      1/0:100:54
+11     99778614        rs1216331       T       A       .       PASS    AA=T;DP=113     GT:GQ:DP        1/0:100:29      1/0:100:23      1/0:100:62
+10     17704272        .       G       A       .       PASS    AA=G;DP=123     GT:GQ:DP        1/0:100:29      1/0:100:23      1/0:100:75
+3      188358899       rs11709037      T       C       .       PASS    AA=T;DP=114     GT:GQ:DP        1/0:100:29      1/0:100:24      1/0:100:61
+3      42390209        rs33532 T       C       .       PASS    AA=N;DP=126     GT:GQ:DP        1/0:100:29      1/0:100:24      1/0:100:76
+3      97151812        rs9848303       T       G       .       PASS    AA=T;DP=132     GT:GQ:DP        1/0:100:29      1/0:100:24      1/0:100:78
+4      147319925       .       T       C       .       PASS    AA=C;DP=124     GT:GQ:DP        1/0:100:29      1/0:100:25      1/0:100:30
+18     65329660        rs8087067       G       A       .       PASS    AA=G;DP=113     GT:GQ:DP        1/0:100:29      1/0:100:25      1/0:100:59
+3      83552122        rs4856453       G       A       .       PASS    AA=-;DP=99      GT:GQ:DP        1/0:100:29      1/0:100:26      1/0:100:45
+13     77152289        rs9593253       G       C       .       PASS    AA=g;DP=111     GT:GQ:DP        1/0:100:29      1/0:100:26      1/0:100:54
+3      26567895        rs7651944       T       A       .       PASS    AA=T;DP=115     GT:GQ:DP        1/0:100:29      1/0:100:26      1/0:100:61
+15     84474360        rs12913662      T       C       .       PASS    AA=C;DP=109     GT:GQ:DP        1/0:100:29      1/0:100:27      1/0:100:49
+5      173338857       .       T       C       .       PASS    AA=T;DP=118     GT:GQ:DP        1/0:100:29      1/0:100:27      1/0:100:61
+5      144896192       rs4443474       T       C       .       PASS    AA=T;DP=141     GT:GQ:DP        1/0:100:29      1/0:100:27      1/0:100:86
+4      117362229       rs28436176      G       A       .       PASS    AA=G;DP=139     GT:GQ:DP        1/0:100:29      1/0:100:29      1/0:100:44
+12     112573180       rs12314110      T       A       .       PASS    AA=T;DP=124     GT:GQ:DP        1/0:100:29      1/0:100:30      1/0:100:61
+18     24065154        rs9959163       G       A       .       PASS    AA=G;DP=131     GT:GQ:DP        1/0:100:29      1/0:100:31      1/0:100:69
+6      110831987       rs57333273      T       A       .       PASS    AA=T;DP=132     GT:GQ:DP        1/0:100:29      1/0:100:31      1/0:100:72
+4      42837847        rs7693407       T       C       .       PASS    AA=T;DP=114     GT:GQ:DP        1/0:100:29      1/0:10:19       1/0:100:67
+17     28650848        rs2346688       T       C       .       PASS    AA=T;DP=106     GT:GQ:DP        1/0:100:29      1/0:29:11       1/0:100:70
+10     125426545       rs1219812       T       C       .       PASS    AA=t;DP=102     GT:GQ:DP        1/0:100:29      1/0:29:14       1/0:100:59
+3      199416  rs13100492      G       C       .       PASS    AA=C;DP=94      GT:GQ:DP        1/0:100:29      1/0:33:14       1/0:100:40
+5      40862810        .       G       C       .       PASS    AA=G;DP=126     GT:GQ:DP        1/0:100:29      1/0:37:18       1/0:100:80
+19     34876062        rs55860107      T       C       .       PASS    AA=T;DP=112     GT:GQ:DP        1/0:100:29      1/0:38:13       1/0:100:71
+7      29763513        rs850144        G       C       .       PASS    AA=g;DP=97      GT:GQ:DP        1/0:100:29      1/0:39:16       1/0:100:51
+21     15619386        rs6517365       C       A       .       PASS    AA=A;DP=116     GT:GQ:DP        1/0:100:29      1/0:40:26       1/0:100:65
+19     4286513 rs58169740      T       G       .       PASS    AA=T;DP=123     GT:GQ:DP        1/0:100:29      1/0:42:20       1/0:100:79
+9      93232753        rs2065437       T       A       .       PASS    AA=T;DP=79      GT:GQ:DP        1/0:100:29      1/0:47:11       1/0:100:31
+2      77738855        rs13393834      T       C       .       PASS    AA=T;DP=127     GT:GQ:DP        1/0:100:29      1/0:47:26       1/0:100:72
+2      162684337       rs10174693      C       A       .       PASS    AA=C;DP=129     GT:GQ:DP        1/0:100:29      1/0:50:21       1/0:100:80
+8      143205122       .       G       A       .       PASS    AA=G;DP=87      GT:GQ:DP        1/0:100:29      1/0:53:12       1/0:100:34
+19     21232392        rs2022408       T       C       .       PASS    AA=t;DP=136     GT:GQ:DP        1/0:100:29      1/0:54:23       1/0:100:83
+16     60920415        rs12325164      C       A       .       PASS    AA=C;DP=94      GT:GQ:DP        1/0:100:29      1/0:56:16       1/0:100:50
+12     40070404        rs10880071      T       C       .       PASS    AA=T;DP=105     GT:GQ:DP        1/0:100:29      1/0:57:19       1/0:100:55
+6      150006678       rs28421449      T       A       .       PASS    AA=t;DP=106     GT:GQ:DP        1/0:100:29      1/0:5:25        1/0:100:49
+17     30179500        .       C       A       .       PASS    AA=C;DP=147     GT:GQ:DP        1/0:100:29      1/0:63:18       1/0:100:96
+21     20154485        rs7283615       T       C       .       PASS    AA=T;DP=111     GT:GQ:DP        1/0:100:29      1/0:65:25       1/0:100:54
+11     100268478       rs545183        G       A       .       PASS    AA=A;DP=115     GT:GQ:DP        1/0:100:29      1/0:66:20       1/0:100:65
+1      65633462        rs3930551       T       G       .       PASS    AA=G;DP=110     GT:GQ:DP        1/0:100:29      1/0:67:16       1/0:100:65
+7      118245654       .       G       C       .       PASS    AA=G;DP=136     GT:GQ:DP        1/0:100:29      1/0:68:28       1/0:100:79
+7      11190335        rs6460792       G       A       .       PASS    AA=A;DP=131     GT:GQ:DP        1/0:100:29      1/0:70:20       1/0:100:84
+13     46250980        rs1216955       C       A       .       PASS    AA=C;DP=132     GT:GQ:DP        1/0:100:29      1/0:70:24       1/0:100:70
+20     18529247        rs6136426       G       A       .       PASS    AA=A;DP=112     GT:GQ:DP        1/0:100:29      1/0:73:19       1/0:100:59
+12     55846076        rs1800174       G       A       .       PASS    AA=G;DP=93      GT:GQ:DP        1/0:100:29      1/0:77:19       1/0:100:37
+3      175781067       rs9290505       G       A       .       PASS    AA=A;DP=122     GT:GQ:DP        1/0:100:29      1/0:78:17       1/0:100:73
+20     51584772        rs2766654       G       A       .       PASS    AA=G;DP=106     GT:GQ:DP        1/0:100:29      1/0:79:18       1/0:100:60
+13     34179967        rs7998286       T       C       .       PASS    AA=T;DP=109     GT:GQ:DP        1/0:100:29      1/0:79:20       1/0:100:59
+9      78842341        rs3904192       T       C       .       PASS    AA=C;DP=105     GT:GQ:DP        1/0:100:29      1/0:81:25       1/0:100:49
+11     21899984        rs1379645       G       A       .       PASS    AA=G;DP=115     GT:GQ:DP        1/0:100:29      1/0:84:19       1/0:100:71
+7      110481843       rs6945175       C       A       .       PASS    AA=N;DP=138     GT:GQ:DP        1/0:100:29      1/0:85:27       1/0:100:86
+6      162629519       rs1893559       G       A       .       PASS    AA=G;DP=116     GT:GQ:DP        1/0:100:29      1/0:88:24       1/0:100:64
+1      178017133       rs10913886      T       C       .       PASS    AA=C;DP=127;HM2 GT:GQ:DP        1/0:100:29      1/0:88:26       1/0:100:72
+X      2166242 .       T       A       .       PASS    AA=N;DP=94      GT:GQ:DP        1/0:100:29      1/0:89:18       1/0:100:44
+14     74980937        rs4899564       T       C       .       PASS    AA=C;DP=118     GT:GQ:DP        1/0:100:29      1/0:89:23       1/0:100:68
+5      21567851        rs12186405      G       A       .       PASS    AA=N;DP=131     GT:GQ:DP        1/0:100:29      1/0:89:38       1/0:100:58
+9      116760418       rs6478122       G       C       .       PASS    AA=C;DP=103     GT:GQ:DP        1/0:100:29      1/0:91:26       1/0:100:48
+5      158667095       rs11135058      T       C       .       PASS    AA=C;DP=99      GT:GQ:DP        1/0:100:29      1/0:92:22       1/0:100:49
+10     89697245        rs2248293       T       C       .       PASS    AA=C;DP=113     GT:GQ:DP        1/0:100:29      1/0:96:21       1/0:100:64
+12     114769840       rs12298601      G       A       .       PASS    AA=G;DP=113     GT:GQ:DP        1/0:100:29      1/0:98:20       1/0:100:65
+12     103711726       rs11112191      T       C       .       PASS    AA=T;DP=100     GT:GQ:DP        1/0:100:29      1/0:98:22       1/0:100:50
+5      55668894        rs7706274       T       C       .       PASS    AA=T;DP=128     GT:GQ:DP        1/0:100:29      1/0:98:27       1/0:100:73
+14     65655854        rs4128  G       A       .       PASS    AA=A;DP=146     GT:GQ:DP        1/0:100:30      1/0:100:20      1/0:100:45
+12     22488333        rs12307877      T       C       .       PASS    AA=T;DP=114     GT:GQ:DP        1/0:100:30      1/0:100:20      1/0:100:66
+2      64555951        .       T       C       .       PASS    AA=T;DP=106     GT:GQ:DP        1/0:100:30      1/0:100:21      1/0:100:55
+12     15261277        rs16910692      T       C       .       PASS    AA=T;DP=118     GT:GQ:DP        1/0:100:30      1/0:100:21      1/0:100:66
+4      21971676        .       C       A       .       PASS    AA=C;DP=124     GT:GQ:DP        1/0:100:30      1/0:100:21      1/0:100:75
+13     61658008        rs9528477       T       G       .       PASS    AA=G;DP=99      GT:GQ:DP        1/0:100:30      1/0:100:22      1/0:100:47
+5      149218541       rs759816        T       C       .       PASS    AA=t;DP=139     GT:GQ:DP        1/0:100:30      1/0:100:22      1/0:100:87
+3      43597898        rs4682691       C       A       .       PASS    AA=A;DP=143     GT:GQ:DP        1/0:100:30      1/0:100:23      1/0:100:36
+4      35011180        rs13133889      T       A       .       PASS    AA=A;DP=129     GT:GQ:DP        1/0:100:30      1/0:100:23      1/0:100:75
+1      29144644        rs204057        C       A       .       PASS    AA=C;DP=111;HM2;HM3     GT:GQ:DP        1/0:100:30      1/0:100:24      1/0:100:57
+17     4097463 rs971164        G       C       .       PASS    AA=N;DP=120     GT:GQ:DP        1/0:100:30      1/0:100:24      1/0:100:66
+7      95190315        .       T       G       .       PASS    AA=T;DP=141     GT:GQ:DP        1/0:100:30      1/0:100:24      1/0:100:80
+12     48271477        rs11169081      G       A       .       PASS    AA=A;DP=114     GT:GQ:DP        1/0:100:30      1/0:100:25      1/0:100:58
+8      68990686        rs6472360       T       C       .       PASS    AA=T;DP=119     GT:GQ:DP        1/0:100:30      1/0:100:25      1/0:100:65
+6      11204703        rs9368572       T       C       .       PASS    AA=T;DP=137     GT:GQ:DP        1/0:100:30      1/0:100:25      1/0:100:83
+2      234368344       rs28899490      T       A       .       PASS    AA=A;DP=141     GT:GQ:DP        1/0:100:30      1/0:100:26      1/0:100:43
+17     40322648        .       T       C       .       PASS    AA=T;DP=160     GT:GQ:DP        1/0:100:30      1/0:100:26      1/0:100:62
+5      62594238        rs373666        G       C       .       PASS    AA=G;DP=119     GT:GQ:DP        1/0:100:30      1/0:100:26      1/0:100:63
+12     101454225       rs10860874      T       C       .       PASS    AA=C;DP=138     GT:GQ:DP        1/0:100:30      1/0:100:26      1/0:100:84
+2      183050970       rs10206152      G       A       .       PASS    AA=A;DP=141     GT:GQ:DP        1/0:100:30      1/0:100:28      1/0:100:81
+15     49238477        rs2118784       C       A       .       PASS    AA=C;DP=144     GT:GQ:DP        1/0:100:30      1/0:100:28      1/0:100:86
+6      146009981       rs1292334       G       A       .       PASS    AA=A;DP=136     GT:GQ:DP        1/0:100:30      1/0:100:29      1/0:100:38
+6      52299216        rs6458829       T       C       .       PASS    AA=T;DP=137     GT:GQ:DP        1/0:100:30      1/0:100:29      1/0:100:83
+6      104178315       rs7744186       G       A       .       PASS    AA=A;DP=134     GT:GQ:DP        1/0:100:30      1/0:100:34      1/0:100:70
+2      140536519       rs1918616       T       C       .       PASS    AA=T;DP=127     GT:GQ:DP        1/0:100:30      1/0:100:41      1/0:100:56
+10     38523738        .       T       A       .       PASS    AA=t;DP=126     GT:GQ:DP        1/0:100:30      1/0:13:29       1/0:31:49
+6      132802656       rs4897585       C       A       .       PASS    AA=C;DP=161     GT:GQ:DP        1/0:100:30      1/0:19:28       1/0:100:103
+6      3138490 rs9503438       G       A       .       PASS    AA=A;DP=120     GT:GQ:DP        1/0:100:30      1/0:25:19       1/0:100:71
+19     13942143        .       T       C       .       PASS    AA=C;DP=119     GT:GQ:DP        1/0:100:30      1/0:26:11       1/0:100:79
+12     53370523        rs768126        G       C       .       PASS    AA=C;DP=106     GT:GQ:DP        1/0:100:30      1/0:30:12       1/0:100:68
+16     58534643        rs13330352      G       A       .       PASS    AA=G;DP=117     GT:GQ:DP        1/0:100:30      1/0:32:20       1/0:100:67
+4      4898706 rs4367121       C       A       .       PASS    AA=C;DP=74      GT:GQ:DP        1/0:100:30      1/0:37:9        1/0:100:29
+1      239397017       rs4660036       G       A       .       PASS    AA=N;DP=103;HM2;HM3     GT:GQ:DP        1/0:100:30      1/0:38:21       1/0:100:53
+5      20504032        rs4257774       T       C       .       PASS    AA=C;DP=96      GT:GQ:DP        1/0:100:30      1/0:39:13       1/0:100:56
+10     44789881        rs10900149      T       C       .       PASS    AA=T;DP=107     GT:GQ:DP        1/0:100:30      1/0:40:13       1/0:100:63
+4      100206865       rs62325240      T       C       .       PASS    AA=T;DP=104     GT:GQ:DP        1/0:100:30      1/0:40:19       1/0:100:46
+6      62977255        rs9454634       T       C       .       PASS    AA=T;DP=96      GT:GQ:DP        1/0:100:30      1/0:45:27       1/0:100:38
+6      145047710       rs4896736       T       C       .       PASS    AA=T;DP=108     GT:GQ:DP        1/0:100:30      1/0:48:19       1/0:100:59
+18     3322506 rs7232103       G       A       .       PASS    AA=A;DP=98      GT:GQ:DP        1/0:100:30      1/0:49:15       1/0:100:49
+12     29063512        rs1561129       G       A       .       PASS    AA=G;DP=110     GT:GQ:DP        1/0:100:30      1/0:49:20       1/0:100:60
+8      18974459        rs13276898      T       C       .       PASS    AA=T;DP=114     GT:GQ:DP        1/0:100:30      1/0:50:12       1/0:100:73
+3      66787915        rs11719935      T       C       .       PASS    AA=C;DP=114     GT:GQ:DP        1/0:100:30      1/0:54:15       1/0:100:70
+16     20626440        rs3848252       G       A       .       PASS    AA=.;DP=126     GT:GQ:DP        1/0:100:30      1/0:55:14       1/0:100:73
+2      164784974       rs1371181       T       C       .       PASS    AA=C;DP=101     GT:GQ:DP        1/0:100:30      1/0:57:15       1/0:100:53
+22     40889770        .       G       A       .       PASS    AA=G;DP=150     GT:GQ:DP        1/0:100:30      1/0:61:20       1/0:100:100
+10     44162054        rs10793536      G       C       .       PASS    AA=C;DP=110     GT:GQ:DP        1/0:100:30      1/0:61:20       1/0:100:63
+2      123761288       rs1607510       T       C       .       PASS    AA=C;DP=103     GT:GQ:DP        1/0:100:30      1/0:61:22       1/0:100:51
+1      155323289       rs12126066      T       C       .       PASS    AA=T;DP=128     GT:GQ:DP        1/0:100:30      1/0:61:34       1/0:100:65
+11     59515948        rs521320        T       C       .       PASS    AA=T;DP=104     GT:GQ:DP        1/0:100:30      1/0:65:19       1/0:100:55
+7      75292388        rs9649643       T       C       .       PASS    AA=C;DP=129     GT:GQ:DP        1/0:100:30      1/0:67:20       1/0:100:81
+9      135017667       rs36080351      T       G       .       PASS    AA=T;DP=144     GT:GQ:DP        1/0:100:30      1/0:69:23       1/0:100:93
+6      120011289       rs13192985      T       C       .       PASS    AA=T;DP=108     GT:GQ:DP        1/0:100:30      1/0:75:23       1/0:100:55
+6      155258957       rs6918967       G       A       .       PASS    AA=A;DP=115     GT:GQ:DP        1/0:100:30      1/0:77:24       1/0:100:61
+3      102866252       rs11712748      G       A       .       PASS    AA=A;DP=103     GT:GQ:DP        1/0:100:30      1/0:79:16       1/0:100:58
+8      140846769       rs1551760       T       G       .       PASS    AA=G;DP=120     GT:GQ:DP        1/0:100:30      1/0:80:16       1/0:100:73
+10     18518673        rs58887549      G       A       .       PASS    AA=G;DP=119     GT:GQ:DP        1/0:100:30      1/0:80:18       1/0:100:73
+3      155874826       rs60616384      G       A       .       PASS    AA=A;DP=114     GT:GQ:DP        1/0:100:30      1/0:80:23       1/0:100:63
+18     4977241 rs11081167      G       C       .       PASS    AA=C;DP=122     GT:GQ:DP        1/0:100:30      1/0:82:18       1/0:100:34
+12     103653534       rs312169        G       A       .       PASS    AA=G;DP=115     GT:GQ:DP        1/0:100:30      1/0:82:25       1/0:100:48
+11     26509272        rs2131696       T       A       .       PASS    AA=T;DP=101     GT:GQ:DP        1/0:100:30      1/0:83:21       1/0:100:37
+18     63398789        rs416584        C       A       .       PASS    AA=C;DP=116     GT:GQ:DP        1/0:100:30      1/0:85:18       1/0:100:70
+22     36248418        rs6000762       T       C       .       PASS    AA=C;DP=129     GT:GQ:DP        1/0:100:30      1/0:87:20       1/0:100:81
+10     93040313        rs10509625      G       A       .       PASS    AA=G;DP=110     GT:GQ:DP        1/0:100:30      1/0:88:15       1/0:100:64
+22     42207213        rs11703733      G       A       .       PASS    AA=G;DP=127     GT:GQ:DP        1/0:100:30      1/0:88:26       1/0:100:69
+12     18541592        rs964357        C       A       .       PASS    AA=C;DP=113     GT:GQ:DP        1/0:100:30      1/0:90:18       1/0:100:68
+16     72062700        rs34149712      T       C       .       PASS    AA=T;DP=137     GT:GQ:DP        1/0:100:30      1/0:90:21       1/0:100:83
+6      70588638        rs6919250       T       G       .       PASS    AA=T;DP=102     GT:GQ:DP        1/0:100:30      1/0:91:21       1/0:100:48
+8      11739695        rs1803249       T       C       .       PASS    AA=T;DP=140     GT:GQ:DP        1/0:100:30      1/0:92:25       1/0:100:87
+10     110989716       rs11815989      T       C       .       PASS    AA=T;DP=136     GT:GQ:DP        1/0:100:30      1/0:94:22       1/0:100:39
+15     47517449        .       G       A       .       PASS    AA=A;DP=119     GT:GQ:DP        1/0:100:30      1/0:95:18       1/0:100:72
+4      143151932       rs1604240       G       A       .       PASS    AA=G;DP=92      GT:GQ:DP        1/0:100:30      1/0:96:24       1/0:100:38
+14     56230692        rs10873099      G       A       .       PASS    AA=G;DP=154     GT:GQ:DP        1/0:100:30      1/0:96:29       1/0:100:88
+9      10736979        rs58981305      T       C       .       PASS    AA=T;DP=123     GT:GQ:DP        1/0:100:30      1/0:97:25       1/0:100:66
+10     91890176        rs10881758      T       A       .       PASS    AA=T;DP=112     GT:GQ:DP        1/0:100:30      1/0:98:22       1/0:100:59
+19     5758596 rs2436530       G       A       .       PASS    AA=G;DP=123     GT:GQ:DP        1/0:100:31      1/0:100:15      1/0:100:78
+19     41502319        rs2972636       T       C       .       PASS    AA=t;DP=108     GT:GQ:DP        1/0:100:31      1/0:100:19      1/0:100:57
+9      106398804       rs1523682       T       A       .       PASS    AA=t;DP=109     GT:GQ:DP        1/0:100:31      1/0:100:19      1/0:100:61
+17     45681922        rs2412300       C       A       .       PASS    AA=C;DP=105     GT:GQ:DP        1/0:100:31      1/0:100:20      1/0:100:55
+5      66124833        rs257712        G       A       .       PASS    AA=A;DP=129     GT:GQ:DP        1/0:100:31      1/0:100:21      1/0:100:76
+6      145317366       .       G       A       .       PASS    AA=G;DP=118     GT:GQ:DP        1/0:100:31      1/0:100:22      1/0:100:55
+5      27061441        rs3792734       G       C       .       PASS    AA=G;DP=125     GT:GQ:DP        1/0:100:31      1/0:100:22      1/0:100:73
+20     44085799        rs7363950       T       C       .       PASS    AA=C;DP=130     GT:GQ:DP        1/0:100:31      1/0:100:23      1/0:100:76
+2      133118446       rs9967655       T       G       .       PASS    AA=T;DP=109     GT:GQ:DP        1/0:100:31      1/0:100:25      1/0:100:53
+20     54766061        rs7268610       G       A       .       PASS    AA=A;DP=112     GT:GQ:DP        1/0:100:31      1/0:100:25      1/0:100:56
+16     79552180        rs8062360       T       C       .       PASS    AA=T;DP=113     GT:GQ:DP        1/0:100:31      1/0:100:25      1/0:100:57
+3      189284761       rs7619439       T       C       .       PASS    AA=T;DP=123     GT:GQ:DP        1/0:100:31      1/0:100:25      1/0:100:62
+8      141004567       rs11166939      G       C       .       PASS    AA=G;DP=134     GT:GQ:DP        1/0:100:31      1/0:100:25      1/0:100:73
+9      90475322        rs10114472      G       A       .       PASS    AA=A;DP=119     GT:GQ:DP        1/0:100:31      1/0:100:26      1/0:100:63
+3      67323803        rs61568280      T       C       .       PASS    AA=T;DP=147     GT:GQ:DP        1/0:100:31      1/0:100:26      1/0:100:91
+3      3937182 rs13100718      T       C       .       PASS    AA=T;DP=122     GT:GQ:DP        1/0:100:31      1/0:100:27      1/0:100:64
+1      59190997        rs7555848       G       A       .       PASS    AA=G;DP=136     GT:GQ:DP        1/0:100:31      1/0:100:28      1/0:100:79
+15     33774579        rs61147653      T       C       .       PASS    AA=T;DP=122     GT:GQ:DP        1/0:100:31      1/0:100:29      1/0:100:62
+20     9979342 rs668091        G       A       .       PASS    AA=A;DP=131     GT:GQ:DP        1/0:100:31      1/0:100:29      1/0:100:69
+5      62266070        rs1521988       T       C       .       PASS    AA=C;DP=136     GT:GQ:DP        1/0:100:31      1/0:100:29      1/0:100:75
+3      5764422 rs1836580       G       A       .       PASS    AA=A;DP=117     GT:GQ:DP        1/0:100:31      1/0:100:30      1/0:100:56
+14     80643369        rs2024426       T       C       .       PASS    AA=T;DP=125     GT:GQ:DP        1/0:100:31      1/0:100:30      1/0:100:66
+12     101595891       rs10860900      T       C       .       PASS    AA=T;DP=131     GT:GQ:DP        1/0:100:31      1/0:100:31      1/0:100:72
+1      235140093       rs12062747      T       G       .       PASS    AA=T;DP=144;HM2 GT:GQ:DP        1/0:100:31      1/0:100:32      1/0:100:43
+11     83288111        rs12277615      T       C       .       PASS    AA=T;DP=139     GT:GQ:DP        1/0:100:31      1/0:100:32      1/0:100:77
+1      169174118       rs2143383       T       G       .       PASS    AA=T;DP=133;HM2;HM3     GT:GQ:DP        1/0:100:31      1/0:100:33      1/0:100:68
+21     15911464        rs10482873      G       A       .       PASS    AA=G;DP=149     GT:GQ:DP        1/0:100:31      1/0:100:37      1/0:100:29
+6      147140770       .       G       A       .       PASS    AA=G;DP=146     GT:GQ:DP        1/0:100:31      1/0:100:39      1/0:100:73
+6      57420643        rs5001500       T       A       .       PASS    AA=t;DP=152     GT:GQ:DP        1/0:100:31      1/0:100:42      1/0:100:63
+8      107174381       rs12155858      G       A       .       PASS    AA=G;DP=130     GT:GQ:DP        1/0:100:31      1/0:14:22       1/0:100:76
+5      95771558        rs156021        T       C       .       PASS    AA=C;DP=110     GT:GQ:DP        1/0:100:31      1/0:26:20       1/0:100:60
+14     94900357        rs61983037      C       A       .       PASS    AA=c;DP=135     GT:GQ:DP        1/0:100:31      1/0:30:19       1/0:100:83
+1      210677677       rs595066        G       A       .       PASS    AA=A;DP=125     GT:GQ:DP        1/0:100:31      1/0:32:17       1/0:100:78
+1      87037080        .       G       A       .       PASS    AA=G;DP=109     GT:GQ:DP        1/0:100:31      1/0:36:19       1/0:100:60
+3      126103881       rs4679366       G       C       .       PASS    AA=G;DP=109     GT:GQ:DP        1/0:100:31      1/0:39:20       1/0:100:58
+7      14939997        rs17372113      T       C       .       PASS    AA=T;DP=95      GT:GQ:DP        1/0:100:31      1/0:41:10       1/0:100:55
+4      72489377        .       T       C       .       PASS    AA=T;DP=82      GT:GQ:DP        1/0:100:31      1/0:41:18       1/0:83:20
+3      113508328       rs9852176       C       A       .       PASS    AA=C;DP=133     GT:GQ:DP        1/0:100:31      1/0:44:25       1/0:100:76
+11     17756912        rs1003921       G       A       .       PASS    AA=G;DP=98      GT:GQ:DP        1/0:100:31      1/0:4:5 1/0:100:62
+7      136984162       rs7789901       T       G       .       PASS    AA=T;DP=89      GT:GQ:DP        1/0:100:31      1/0:50:19       1/0:100:28
+1      240306191       rs10803014      G       A       .       PASS    AA=A;DP=129;HM2;HM3     GT:GQ:DP        1/0:100:31      1/0:57:16       1/0:100:84
+6      8577244 rs7750064       T       A       .       PASS    AA=A;DP=114     GT:GQ:DP        1/0:100:31      1/0:61:19       1/0:100:64
+10     113008589       rs4278450       G       A       .       PASS    AA=A;DP=143     GT:GQ:DP        1/0:100:31      1/0:61:22       1/0:100:92
+14     105609210       .       T       A       .       PASS    AA=.;DP=128     GT:GQ:DP        1/0:100:31      1/0:62:17       1/0:100:82
+15     55820116        .       G       A       .       PASS    AA=G;DP=155     GT:GQ:DP        1/0:100:31      1/0:63:32       1/0:100:93
+8      40163266        rs2925036       G       A       .       PASS    AA=A;DP=105     GT:GQ:DP        1/0:100:31      1/0:65:12       1/0:100:61
+5      173242622       rs2973353       C       A       .       PASS    AA=C;DP=99      GT:GQ:DP        1/0:100:31      1/0:65:23       1/0:100:46
+7      38692408        rs12701651      C       A       .       PASS    AA=C;DP=130     GT:GQ:DP        1/0:100:31      1/0:70:17       1/0:100:83
+11     119916720       rs58313956      G       C       .       PASS    AA=G;DP=139     GT:GQ:DP        1/0:100:31      1/0:70:26       1/0:100:80
+15     87171306        .       T       C       .       PASS    AA=T;DP=134     GT:GQ:DP        1/0:100:31      1/0:71:27       1/0:100:80
+4      127879929       rs17011528      G       A       .       PASS    AA=G;DP=105     GT:GQ:DP        1/0:100:31      1/0:74:17       1/0:100:57
+16     25857102        rs8051001       G       C       .       PASS    AA=C;DP=123     GT:GQ:DP        1/0:100:31      1/0:76:18       1/0:100:72
+6      163298825       rs7769875       G       A       .       PASS    AA=G;DP=109     GT:GQ:DP        1/0:100:31      1/0:78:28       1/0:100:51
+18     44720482        rs9955731       G       A       .       PASS    AA=A;DP=97      GT:GQ:DP        1/0:100:31      1/0:80:15       1/0:100:52
+10     92412681        rs2263618       C       A       .       PASS    AA=c;DP=95      GT:GQ:DP        1/0:100:31      1/0:81:11       1/0:100:53
+7      20971823        rs7779289       G       A       .       PASS    AA=G;DP=118     GT:GQ:DP        1/0:100:31      1/0:84:21       1/0:100:67
+1      16338590        rs11260745      T       C       .       PASS    AA=T;DP=126;HM2;HM3     GT:GQ:DP        1/0:100:31      1/0:84:21       1/0:100:77
+13     52834099        rs7981317       T       A       .       PASS    AA=A;DP=133     GT:GQ:DP        1/0:100:31      1/0:85:19       1/0:100:83
+6      47040710        .       G       C       .       PASS    AA=G;DP=139     GT:GQ:DP        1/0:100:31      1/0:86:22       1/0:100:47
+10     18785587        rs11014316      T       C       .       PASS    AA=C;DP=133     GT:GQ:DP        1/0:100:31      1/0:87:20       1/0:100:85
+6      38855277        .       T       C       .       PASS    AA=T;DP=137     GT:GQ:DP        1/0:100:31      1/0:87:30       1/0:100:80
+6      25447699        rs62839562      G       A       .       PASS    AA=A;DP=126     GT:GQ:DP        1/0:100:31      1/0:88:24       1/0:100:75
+22     31243298        rs2710369       T       C       .       PASS    AA=T;DP=129     GT:GQ:DP        1/0:100:31      1/0:88:27       1/0:100:71
+3      111460189       rs1461766       G       A       .       PASS    AA=G;DP=94      GT:GQ:DP        1/0:100:31      1/0:89:15       1/0:100:45
+1      229560961       rs2491402       T       C       .       PASS    AA=C;DP=125     GT:GQ:DP        1/0:100:31      1/0:91:20       1/0:100:72
+5      126605056       rs34336089      G       A       .       PASS    AA=A;DP=120     GT:GQ:DP        1/0:100:31      1/0:91:21       1/0:100:66
+14     19453249        rs1686598       T       G       .       PASS    AA=T;DP=147     GT:GQ:DP        1/0:100:31      1/0:95:19       1/0:100:76
+10     99354999        .       T       C       .       PASS    AA=C;DP=101     GT:GQ:DP        1/0:100:31      1/0:97:20       1/0:100:51
+10     73558400        rs7098039       G       A       .       PASS    AA=A;DP=119     GT:GQ:DP        1/0:100:31      1/0:99:18       1/0:100:69
+3      118142557       rs6776688       G       A       .       PASS    AA=G;DP=113     GT:GQ:DP        1/0:100:32      1/0:100:17      1/0:100:64
+12     50704342        rs1732235       T       C       .       PASS    AA=C;DP=124     GT:GQ:DP        1/0:100:32      1/0:100:17      1/0:100:76
+8      75204792        rs1909530       T       G       .       PASS    AA=G;DP=128     GT:GQ:DP        1/0:100:32      1/0:100:19      1/0:100:83
+11     26422856        rs10047414      G       A       .       PASS    AA=G;DP=106     GT:GQ:DP        1/0:100:32      1/0:100:20      1/0:100:53
+9      88859576        rs7019492       T       A       .       PASS    AA=T;DP=118     GT:GQ:DP        1/0:100:32      1/0:100:20      1/0:100:64
+12     46881512        rs11168458      G       C       .       PASS    AA=g;DP=135     GT:GQ:DP        1/0:100:32      1/0:100:24      1/0:100:80
+2      226688014       rs16866841      T       G       .       PASS    AA=T;DP=133     GT:GQ:DP        1/0:100:32      1/0:100:25      1/0:100:76
+2      18947148        rs13420742      G       A       .       PASS    AA=G;DP=139     GT:GQ:DP        1/0:100:32      1/0:100:25      1/0:100:81
+10     24098810        rs10828544      T       C       .       PASS    AA=C;DP=136     GT:GQ:DP        1/0:100:32      1/0:100:26      1/0:100:78
+16     56736097        rs11860708      G       A       .       PASS    AA=N;DP=136     GT:GQ:DP        1/0:100:32      1/0:100:26      1/0:100:78
+1      46063064        rs6697830       C       A       .       PASS    AA=C;DP=114     GT:GQ:DP        1/0:100:32      1/0:100:28      1/0:100:55
+1      45959163        rs28890893      T       G       .       PASS    AA=T;DP=122;HM3 GT:GQ:DP        1/0:100:32      1/0:100:32      1/0:100:58
+4      105996282       rs2522488       G       A       .       PASS    AA=G;DP=123     GT:GQ:DP        1/0:100:32      1/0:100:32      1/0:100:58
+8      3320635 rs10106196      G       A       .       PASS    AA=A;DP=122     GT:GQ:DP        1/0:100:32      1/0:100:32      1/0:100:58
+18     55647518        rs1788893       G       A       .       PASS    AA=G;DP=142     GT:GQ:DP        1/0:100:32      1/0:100:34      1/0:100:76
+3      190300432       rs2001402       G       A       .       PASS    AA=G;DP=136     GT:GQ:DP        1/0:100:32      1/0:100:35      1/0:100:71
+3      8537292 .       G       C       .       PASS    AA=C;DP=139     GT:GQ:DP        1/0:100:32      1/0:100:35      1/0:100:72
+15     34489436        rs8030443       T       C       .       PASS    AA=T;DP=122     GT:GQ:DP        1/0:100:32      1/0:12:25       1/0:100:52
+11     92962967        rs1939562       T       G       .       PASS    AA=T;DP=126     GT:GQ:DP        1/0:100:32      1/0:14:22       1/0:100:75
+7      52390656        rs28550389      G       A       .       PASS    AA=g;DP=125     GT:GQ:DP        1/0:100:32      1/0:17:25       1/0:100:68
+12     47785018        rs2279596       G       A       .       PASS    AA=A;DP=122     GT:GQ:DP        1/0:100:32      1/0:23:19       1/0:100:71
+16     11350925        rs7197188       C       A       .       PASS    AA=A;DP=129     GT:GQ:DP        1/0:100:32      1/0:41:19       1/0:100:78
+8      89597264        rs16883962      G       C       .       PASS    AA=C;DP=120     GT:GQ:DP        1/0:100:32      1/0:43:23       1/0:100:65
+10     87701273        rs10788472      G       A       .       PASS    AA=A;DP=140     GT:GQ:DP        1/0:100:32      1/0:44:18       1/0:100:46
+5      140724579       rs57308563      T       C       .       PASS    AA=C;DP=112     GT:GQ:DP        1/0:100:32      1/0:52:18       1/0:100:61
+2      148869915       .       T       G       .       PASS    AA=T;DP=123     GT:GQ:DP        1/0:100:32      1/0:57:19       1/0:100:73
+3      138948732       rs201700        T       C       .       PASS    AA=T;DP=122     GT:GQ:DP        1/0:100:32      1/0:63:27       1/0:100:60
+7      146745196       rs6464799       G       A       .       PASS    AA=G;DP=119     GT:GQ:DP        1/0:100:32      1/0:67:23       1/0:100:67
+8      75381994        rs1005231       T       G       .       PASS    AA=G;DP=160     GT:GQ:DP        1/0:100:32      1/0:75:19       1/0:100:64
+1      238499255       rs57420278      T       G       .       PASS    AA=T;DP=112     GT:GQ:DP        1/0:100:32      1/0:77:16       1/0:100:62
+4      56220593        rs6857642       G       A       .       PASS    AA=A;DP=109     GT:GQ:DP        1/0:100:32      1/0:79:18       1/0:100:59
+4      140036925       rs28407397      C       A       .       PASS    AA=C;DP=116     GT:GQ:DP        1/0:100:32      1/0:79:26       1/0:100:59
+21     45505521        rs2838858       T       A       .       PASS    AA=A;DP=135     GT:GQ:DP        1/0:100:32      1/0:81:14       1/0:100:91
+10     616237  rs10128217      G       A       .       PASS    AA=G;DP=144     GT:GQ:DP        1/0:100:32      1/0:87:28       1/0:100:61
+13     44568199        rs9567526       G       A       .       PASS    AA=G;DP=149     GT:GQ:DP        1/0:100:32      1/0:88:27       1/0:100:94
+5      167788146       rs3733982       T       A       .       PASS    AA=T;DP=97      GT:GQ:DP        1/0:100:32      1/0:89:19       1/0:100:43
+4      136930189       .       C       A       .       PASS    AA=C;DP=141     GT:GQ:DP        1/0:100:32      1/0:90:25       1/0:100:88
+2      180400446       rs165377        T       C       .       PASS    AA=T;DP=102     GT:GQ:DP        1/0:100:32      1/0:93:19       1/0:100:49
+12     83640295        rs4294601       T       C       .       PASS    AA=C;DP=130     GT:GQ:DP        1/0:100:32      1/0:96:28       1/0:100:73
+2      105972537       rs3860448       G       A       .       PASS    AA=G;DP=105     GT:GQ:DP        1/0:100:32      1/0:97:15       1/0:100:59
+1      10031538        .       T       G       .       PASS    AA=T;DP=156     GT:GQ:DP        1/0:100:32      1/0:97:22       1/0:100:55
+4      27860949        rs7698910       T       A       .       PASS    AA=T;DP=110     GT:GQ:DP        1/0:100:32      1/0:99:18       1/0:100:61
+X      236049  rs2738396       C       A       .       PASS    AA=C;DP=103     GT:GQ:DP        1/0:100:32      1/0:99:18       1/0:98:47
+10     52313227        rs6479769       T       C       .       PASS    AA=T;DP=123     GT:GQ:DP        1/0:100:33      1/0:100:19      1/0:100:69
+3      39817610        rs6766629       G       A       .       PASS    AA=A;DP=118     GT:GQ:DP        1/0:100:33      1/0:100:20      1/0:100:63
+12     110490712       rs12314647      T       C       .       PASS    AA=T;DP=136     GT:GQ:DP        1/0:100:33      1/0:100:23      1/0:100:83
+2      118350818       rs1072231       T       C       .       PASS    AA=T;DP=118     GT:GQ:DP        1/0:100:33      1/0:100:24      1/0:100:60
+6      136577063       rs936629        G       C       .       PASS    AA=C;DP=153     GT:GQ:DP        1/0:100:33      1/0:100:25      1/0:100:97
+7      135154818       rs2960904       T       C       .       PASS    AA=t;DP=134     GT:GQ:DP        1/0:100:33      1/0:100:26      1/0:100:75
+20     54359413        rs6014699       T       C       .       PASS    AA=C;DP=143     GT:GQ:DP        1/0:100:33      1/0:100:27      1/0:100:82
+10     44380310        rs10793544      G       A       .       PASS    AA=A;DP=125     GT:GQ:DP        1/0:100:33      1/0:100:28      1/0:100:65
+8      110275431       rs4735114       T       G       .       PASS    AA=T;DP=137     GT:GQ:DP        1/0:100:33      1/0:100:28      1/0:100:76
+8      6090256 rs4563906       G       A       .       PASS    AA=A;DP=132     GT:GQ:DP        1/0:100:33      1/0:100:28      1/0:100:76
+3      128713965       rs2720226       T       C       .       PASS    AA=G;DP=149     GT:GQ:DP        1/0:100:33      1/0:100:28      1/0:100:88
+3      157774459       rs12630138      T       A       .       PASS    AA=T;DP=146     GT:GQ:DP        1/0:100:33      1/0:100:29      1/0:100:44
+9      117181336       rs7466770       T       G       .       PASS    AA=T;DP=138     GT:GQ:DP        1/0:100:33      1/0:100:30      1/0:100:36
+7      45444263        rs58546745      T       C       .       PASS    AA=C;DP=143     GT:GQ:DP        1/0:100:33      1/0:100:30      1/0:100:80
+22     32890083        rs4821219       G       C       .       PASS    AA=C;DP=141     GT:GQ:DP        1/0:100:33      1/0:100:30      1/0:100:85
+6      111205765       rs1775138       T       A       .       PASS    AA=A;DP=139     GT:GQ:DP        1/0:100:33      1/0:100:31      1/0:100:73
+3      163260556       rs28411090      T       C       .       PASS    AA=T;DP=133     GT:GQ:DP        1/0:100:33      1/0:100:32      1/0:100:68
+20     18595054        rs6136460       T       C       .       PASS    AA=T;DP=148     GT:GQ:DP        1/0:100:33      1/0:100:34      1/0:100:78
+4      63374403        rs59583769      T       C       .       PASS    AA=T;DP=86      GT:GQ:DP        1/0:100:33      1/0:13:11       1/0:100:44
+2      46440601        rs7583554       T       C       .       PASS    AA=T;DP=137     GT:GQ:DP        1/0:100:33      1/0:19:26       1/0:100:78
+18     66608004        rs1282597       G       A       .       PASS    AA=G;DP=136     GT:GQ:DP        1/0:100:33      1/0:29:30       1/0:100:75
+7      148648721       rs11761128      T       C       .       PASS    AA=T;DP=128     GT:GQ:DP        1/0:100:33      1/0:30:22       1/0:100:73
+16     87306116        rs7205989       G       A       .       PASS    AA=G;DP=102     GT:GQ:DP        1/0:100:33      1/0:32:10       1/0:100:57
+10     28972134        rs4749330       G       A       .       PASS    AA=g;DP=101     GT:GQ:DP        1/0:100:33      1/0:35:16       1/0:100:51
+9      17621143        rs975696        T       C       .       PASS    AA=C;DP=110     GT:GQ:DP        1/0:100:33      1/0:40:20       1/0:100:58
+10     10829575        .       G       A       .       PASS    AA=A;DP=112     GT:GQ:DP        1/0:100:33      1/0:47:16       1/0:100:62
+9      125929397       rs7037568       G       A       .       PASS    AA=G;DP=132     GT:GQ:DP        1/0:100:33      1/0:49:22       1/0:100:75
+1      235232101       rs7533115       T       C       .       PASS    AA=T;DP=122;HM2 GT:GQ:DP        1/0:100:33      1/0:52:23       1/0:100:66
+21     24838215        rs17000056      G       C       .       PASS    AA=G;DP=111     GT:GQ:DP        1/0:100:33      1/0:54:15       1/0:100:64
+3      4679636 rs10514656      T       C       .       PASS    AA=t;DP=124     GT:GQ:DP        1/0:100:33      1/0:59:23       1/0:100:71
+1      200921323       rs7512250       G       A       .       PASS    AA=G;DP=123;HM2 GT:GQ:DP        1/0:100:33      1/0:5:23        1/0:100:67
+5      116670762       rs10079046      T       C       .       PASS    AA=T;DP=126     GT:GQ:DP        1/0:100:33      1/0:60:21       1/0:100:74
+6      168790373       rs7761615       T       C       .       PASS    AA=T;DP=109     GT:GQ:DP        1/0:100:33      1/0:63:15       1/0:100:61
+16     55934082        rs28401442      C       A       .       PASS    AA=A;DP=126     GT:GQ:DP        1/0:100:33      1/0:67:16       1/0:100:79
+10     16167143        rs7901311       G       A       .       PASS    AA=A;DP=126     GT:GQ:DP        1/0:100:33      1/0:68:19       1/0:100:75
+8      83590937        rs57129712      T       C       .       PASS    AA=T;DP=129     GT:GQ:DP        1/0:100:33      1/0:68:27       1/0:100:70
+10     125686475       .       G       A       .       PASS    AA=A;DP=127     GT:GQ:DP        1/0:100:33      1/0:72:19       1/0:100:74
+15     69962017        rs62023343      C       A       .       PASS    AA=C;DP=115     GT:GQ:DP        1/0:100:33      1/0:77:20       1/0:100:63
+8      47261663        rs7293777       T       C       .       PASS    AA=.;DP=121     GT:GQ:DP        1/0:100:33      1/0:77:26       1/0:100:63
+6      63565238        rs9359107       G       A       .       PASS    AA=g;DP=97      GT:GQ:DP        1/0:100:33      1/0:78:21       1/0:100:43
+5      40737915        rs6451537       T       G       .       PASS    AA=G;DP=127     GT:GQ:DP        1/0:100:33      1/0:79:26       1/0:100:70
+10     59957641        rs1346300       G       C       .       PASS    AA=C;DP=130     GT:GQ:DP        1/0:100:33      1/0:82:21       1/0:100:77
+4      100520851       .       T       C       .       PASS    AA=T;DP=128     GT:GQ:DP        1/0:100:33      1/0:86:27       1/0:100:37
+4      103974375       rs57970082      G       A       .       PASS    AA=G;DP=135     GT:GQ:DP        1/0:100:33      1/0:87:26       1/0:100:75
+7      150044845       rs3800786       T       C       .       PASS    AA=T;DP=131     GT:GQ:DP        1/0:100:33      1/0:91:17       1/0:100:85
+3      178934701       rs4857620       G       A       .       PASS    AA=G;DP=129     GT:GQ:DP        1/0:100:33      1/0:92:26       1/0:100:70
+6      117427156       rs13213573      T       G       .       PASS    AA=T;DP=111     GT:GQ:DP        1/0:100:33      1/0:93:15       1/0:100:63
+2      43554717        rs13396401      G       A       .       PASS    AA=G;DP=132     GT:GQ:DP        1/0:100:33      1/0:93:23       1/0:100:75
+3      121609926       rs869247        T       C       .       PASS    AA=T;DP=140     GT:GQ:DP        1/0:100:33      1/0:94:28       1/0:100:81
+18     54950872        rs12963410      T       C       .       PASS    AA=C;DP=126     GT:GQ:DP        1/0:100:33      1/0:96:26       1/0:100:66
+9      135560910       rs2510245       G       A       .       PASS    AA=G;DP=125     GT:GQ:DP        1/0:100:33      1/0:97:21       1/0:100:72
+1      8350307 .       T       A       .       PASS    AA=t;DP=141     GT:GQ:DP        1/0:100:34      1/0:100:19      1/0:100:87
+1      55502725        rs6670546       G       A       .       PASS    AA=A;DP=115     GT:GQ:DP        1/0:100:34      1/0:100:21      1/0:100:62
+1      25757227        .       T       C       .       PASS    AA=T;DP=149     GT:GQ:DP        1/0:100:34      1/0:100:21      1/0:100:95
+4      14445593        .       T       C       .       PASS    AA=t;DP=137     GT:GQ:DP        1/0:100:34      1/0:100:22      1/0:100:38
+18     38139797        rs10502782      G       A       .       PASS    AA=G;DP=127     GT:GQ:DP        1/0:100:34      1/0:100:23      1/0:100:73
+14     45762810        .       T       C       .       PASS    AA=C;DP=135     GT:GQ:DP        1/0:100:34      1/0:100:23      1/0:100:77
+2      241714126       .       T       A       .       PASS    AA=A;DP=154     GT:GQ:DP        1/0:100:34      1/0:100:24      1/0:100:95
+14     62667297        rs2883863       T       C       .       PASS    AA=t;DP=139     GT:GQ:DP        1/0:100:34      1/0:100:25      1/0:100:41
+2      168548335       rs10199275      G       C       .       PASS    AA=G;DP=119     GT:GQ:DP        1/0:100:34      1/0:100:25      1/0:100:60
+6      47436982        rs62400763      C       A       .       PASS    AA=C;DP=146     GT:GQ:DP        1/0:100:34      1/0:100:25      1/0:100:88
+7      25062373        rs39409 T       C       .       PASS    AA=T;DP=149     GT:GQ:DP        1/0:100:34      1/0:100:27      1/0:100:48
+7      146831158       rs7788685       G       A       .       PASS    AA=G;DP=128     GT:GQ:DP        1/0:100:34      1/0:100:27      1/0:100:66
+15     36283412        .       T       C       .       PASS    AA=T;DP=132     GT:GQ:DP        1/0:100:34      1/0:100:27      1/0:100:70
+12     10249364        rs10772241      T       C       .       PASS    AA=C;DP=130     GT:GQ:DP        1/0:100:34      1/0:100:27      1/0:100:71
+19     59151865        rs11084305      T       G       .       PASS    AA=T;DP=133     GT:GQ:DP        1/0:100:34      1/0:100:27      1/0:100:75
+6      112116120       rs11153312      T       G       .       PASS    AA=T;DP=137     GT:GQ:DP        1/0:100:34      1/0:100:27      1/0:100:77
+9      10662699        rs10738179      G       A       .       PASS    AA=A;DP=124     GT:GQ:DP        1/0:100:34      1/0:100:28      1/0:100:65
+1      52366176        .       G       A       .       PASS    AA=G;DP=143     GT:GQ:DP        1/0:100:34      1/0:100:28      1/0:100:81
+1      245845557       .       T       C       .       PASS    AA=t;DP=161     GT:GQ:DP        1/0:100:34      1/0:100:29      1/0:100:45
+2      43736435        rs2374566       G       A       .       PASS    AA=A;DP=158     GT:GQ:DP        1/0:100:34      1/0:100:29      1/0:100:55
+5      154369572       rs61386671      G       A       .       PASS    AA=G;DP=135     GT:GQ:DP        1/0:100:34      1/0:100:29      1/0:100:73
+6      31380560        rs4713451       T       C       .       PASS    AA=t;DP=145     GT:GQ:DP        1/0:100:34      1/0:100:29      1/0:100:82
+22     25671944        .       T       A       .       PASS    AA=T;DP=147     GT:GQ:DP        1/0:100:34      1/0:100:29      1/0:100:84
+21     29798945        rs9636825       G       A       .       PASS    AA=G;DP=137     GT:GQ:DP        1/0:100:34      1/0:100:30      1/0:100:35
+3      61269428        rs7636531       G       A       .       PASS    AA=A;DP=125     GT:GQ:DP        1/0:100:34      1/0:100:30      1/0:100:59
+1      112197934       rs1777659       G       A       .       PASS    AA=G;DP=139;HM2;HM3     GT:GQ:DP        1/0:100:34      1/0:100:30      1/0:100:73
+1      204742954       rs3860295       G       A       .       PASS    AA=G;DP=150;HM2;HM3     GT:GQ:DP        1/0:100:34      1/0:100:30      1/0:100:86
+19     58884536        rs11084274      G       A       .       PASS    AA=A;DP=118     GT:GQ:DP        1/0:100:34      1/0:100:32      1/0:100:41
+5      13784975        rs6554807       T       G       .       PASS    AA=G;DP=144     GT:GQ:DP        1/0:100:34      1/0:100:32      1/0:100:77
+1      183808864       rs528985        G       A       .       PASS    AA=A;DP=142     GT:GQ:DP        1/0:100:34      1/0:100:35      1/0:100:77
+10     60757957        .       T       A       .       PASS    AA=T;DP=151     GT:GQ:DP        1/0:100:34      1/0:100:38      1/0:100:77
+1      245460278       rs6693807       T       C       .       PASS    AA=C;DP=180;HM2;HM3     GT:GQ:DP        1/0:100:34      1/0:100:45      1/0:100:57
+1      13717964        rs4089350       G       A       .       PASS    AA=G;DP=103;HM2 GT:GQ:DP        1/0:100:34      1/0:27:18       1/0:100:52
+9      128388450       .       G       A       .       PASS    AA=G;DP=115     GT:GQ:DP        1/0:100:34      1/0:28:18       1/0:100:63
+10     83552909        rs10883751      T       C       .       PASS    AA=N;DP=107     GT:GQ:DP        1/0:100:34      1/0:28:22       1/0:100:51
+15     98421872        rs34365483      G       A       .       PASS    AA=G;DP=153     GT:GQ:DP        1/0:100:34      1/0:28:28       1/0:100:49
+20     34038483        rs6121116       G       A       .       PASS    AA=G;DP=138     GT:GQ:DP        1/0:100:34      1/0:38:12       1/0:100:95
+12     130055585       rs12312121      T       C       .       PASS    AA=C;DP=120     GT:GQ:DP        1/0:100:34      1/0:40:9        1/0:100:76
+20     5746757 rs6139845       G       C       .       PASS    AA=g;DP=123     GT:GQ:DP        1/0:100:34      1/0:49:21       1/0:100:66
+2      227443146       rs2303856       T       C       .       PASS    AA=t;DP=141     GT:GQ:DP        1/0:100:34      1/0:54:20       1/0:100:90
+7      95940518        rs3113045       G       A       .       PASS    AA=A;DP=134     GT:GQ:DP        1/0:100:34      1/0:56:26       1/0:100:73
+12     124077496       rs11058000      G       A       .       PASS    AA=G;DP=90      GT:GQ:DP        1/0:100:34      1/0:58:13       1/0:100:39
+10     94967173        rs4918925       C       A       .       PASS    AA=C;DP=130     GT:GQ:DP        1/0:100:34      1/0:60:21       1/0:100:75
+9      100208481       rs6478702       T       C       .       PASS    AA=T;DP=130     GT:GQ:DP        1/0:100:34      1/0:65:21       1/0:100:73
+8      24845789        rs196843        T       G       .       PASS    AA=T;DP=131     GT:GQ:DP        1/0:100:34      1/0:65:26       1/0:100:74
+5      2838311 rs2896970       T       C       .       PASS    AA=t;DP=116     GT:GQ:DP        1/0:100:34      1/0:66:11       1/0:100:72
+7      2979610 rs60786703      T       C       .       PASS    AA=T;DP=144     GT:GQ:DP        1/0:100:34      1/0:69:28       1/0:100:82
+1      99812107        rs1890753       G       C       .       PASS    AA=G;DP=115;HM2 GT:GQ:DP        1/0:100:34      1/0:75:14       1/0:100:67
+6      57668202        .       C       A       .       PASS    AA=c;DP=129     GT:GQ:DP        1/0:100:34      1/0:75:25       1/0:100:57
+10     84256054        .       G       A       .       PASS    AA=G;DP=129     GT:GQ:DP        1/0:100:34      1/0:78:16       1/0:100:36
+19     2787477 rs1029843       G       A       .       PASS    AA=N;DP=128     GT:GQ:DP        1/0:100:34      1/0:84:27       1/0:100:68
+2      56058604        rs6724635       G       C       .       PASS    AA=C;DP=102     GT:GQ:DP        1/0:100:34      1/0:86:15       1/0:100:50
+11     116063992       rs12800424      G       A       .       PASS    AA=g;DP=122     GT:GQ:DP        1/0:100:34      1/0:86:19       1/0:100:68
+20     17010452        rs16998666      C       A       .       PASS    AA=C;DP=120     GT:GQ:DP        1/0:100:34      1/0:86:23       1/0:100:64
+2      102649841       rs17027659      T       A       .       PASS    AA=T;DP=113     GT:GQ:DP        1/0:100:34      1/0:87:30       1/0:100:48
+2      129848603       rs1568769       T       C       .       PASS    AA=C;DP=145     GT:GQ:DP        1/0:100:34      1/0:88:17       1/0:100:78
+2      216739573       rs3821107       T       C       .       PASS    AA=C;DP=130     GT:GQ:DP        1/0:100:34      1/0:89:18       1/0:100:80
+2      59962491        rs13021864      G       A       .       PASS    AA=g;DP=126     GT:GQ:DP        1/0:100:34      1/0:90:20       1/0:100:72
+6      168295980       rs11750994      G       A       .       PASS    AA=G;DP=139     GT:GQ:DP        1/0:100:34      1/0:91:17       1/0:100:90
+2      9395323 .       T       C       .       PASS    AA=C;DP=108     GT:GQ:DP        1/0:100:34      1/0:95:19       1/0:100:56
+3      197892884       rs2686589       T       C       .       PASS    AA=C;DP=153     GT:GQ:DP        1/0:100:34      1/0:97:32       1/0:100:88
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+13     103582559       .       T       A       .       PASS    AA=T;DP=102     GT:GQ:DP        1/0:100:35      1/0:100:21      1/0:100:45
+17     51288394        rs766260        G       A       .       PASS    AA=A;DP=98      GT:GQ:DP        1/0:100:35      1/0:100:22      1/0:100:41
+12     10133514        .       T       G       .       PASS    AA=T;DP=111     GT:GQ:DP        1/0:100:35      1/0:100:22      1/0:100:51
+4      88647729        rs6837379       T       A       .       PASS    AA=N;DP=114     GT:GQ:DP        1/0:100:35      1/0:100:22      1/0:100:59
+12     89193215        .       G       A       .       PASS    AA=G;DP=137     GT:GQ:DP        1/0:100:35      1/0:100:23      1/0:100:80
+9      135119537       rs4962116       G       A       .       PASS    AA=N;DP=146     GT:GQ:DP        1/0:100:35      1/0:100:25      1/0:100:86
+8      72894105        rs6472624       C       A       .       PASS    AA=A;DP=136     GT:GQ:DP        1/0:100:35      1/0:100:26      1/0:100:74
+13     41036588        rs1034204       T       C       .       PASS    AA=C;DP=140     GT:GQ:DP        1/0:100:35      1/0:100:26      1/0:100:80
+3      23968192        rs4131404       G       A       .       PASS    AA=G;DP=121     GT:GQ:DP        1/0:100:35      1/0:100:28      1/0:100:58
+5      119006718       rs994149        C       A       .       PASS    AA=C;DP=146     GT:GQ:DP        1/0:100:35      1/0:100:30      1/0:100:84
+11     128648441       rs4616048       T       C       .       PASS    AA=T;DP=166     GT:GQ:DP        1/0:100:35      1/0:100:32      1/0:100:97
+15     68936018        .       G       A       .       PASS    AA=G;DP=146     GT:GQ:DP        1/0:100:35      1/0:100:33      1/0:100:78
+5      116822468       rs58752187      G       C       .       PASS    AA=G;DP=133     GT:GQ:DP        1/0:100:35      1/0:100:36      1/0:100:62
+16     19018077        rs7192528       T       C       .       PASS    AA=T;DP=167     GT:GQ:DP        1/0:100:35      1/0:100:37      1/0:100:53
+16     78612330        rs8061758       T       C       .       PASS    AA=T;DP=149     GT:GQ:DP        1/0:100:35      1/0:100:37      1/0:100:78
+4      46991195        rs7699194       G       A       .       PASS    AA=-;DP=109     GT:GQ:DP        1/0:100:35      1/0:26:15       1/0:100:59
+2      2500231 rs58461590      C       A       .       PASS    AA=C;DP=135     GT:GQ:DP        1/0:100:35      1/0:27:13       1/0:100:84
+9      91457098        rs12340151      G       A       .       PASS    AA=G;DP=102     GT:GQ:DP        1/0:100:35      1/0:32:15       1/0:100:42
+3      8838809 rs17049612      T       G       .       PASS    AA=T;DP=120     GT:GQ:DP        1/0:100:35      1/0:34:20       1/0:100:66
+1      110896142       rs6683833       T       C       .       PASS    AA=T;DP=123     GT:GQ:DP        1/0:100:35      1/0:62:22       1/0:100:67
+1      7352981 rs3752543       T       C       .       PASS    AA=N;DP=120;HM2;HM3     GT:GQ:DP        1/0:100:35      1/0:63:21       1/0:100:62
+15     99375164        rs963333        G       A       .       PASS    AA=A;DP=115     GT:GQ:DP        1/0:100:35      1/0:65:18       1/0:100:63
+19     56626367        rs12460692      G       A       .       PASS    AA=G;DP=146     GT:GQ:DP        1/0:100:35      1/0:66:19       1/0:100:40
+14     22522724        rs8012568       T       C       .       PASS    AA=T;DP=121     GT:GQ:DP        1/0:100:35      1/0:68:15       1/0:100:70
+7      35364947        rs2160622       T       G       .       PASS    AA=T;DP=117     GT:GQ:DP        1/0:100:35      1/0:69:17       1/0:100:64
+15     61147617        rs2729827       G       A       .       PASS    AA=A;DP=133     GT:GQ:DP        1/0:100:35      1/0:73:21       1/0:100:79
+9      21158306        rs2891157       G       C       .       PASS    AA=C;DP=125     GT:GQ:DP        1/0:100:35      1/0:74:17       1/0:100:72
+4      91879726        rs7687983       G       A       .       PASS    AA=A;DP=147     GT:GQ:DP        1/0:100:35      1/0:81:29       1/0:100:84
+1      177234544       rs997420        T       C       .       PASS    AA=N;DP=157;HM2 GT:GQ:DP        1/0:100:35      1/0:82:26       1/0:100:48
+2      8579277 rs7576378       G       A       .       PASS    AA=G;DP=136     GT:GQ:DP        1/0:100:35      1/0:83:26       1/0:100:73
+16     17925665        rs12444645      T       C       .       PASS    AA=T;DP=142     GT:GQ:DP        1/0:100:35      1/0:87:28       1/0:100:80
+2      16925157        rs4446073       T       G       .       PASS    AA=G;DP=127     GT:GQ:DP        1/0:100:35      1/0:88:26       1/0:100:66
+8      134163356       .       G       A       .       PASS    AA=g;DP=140     GT:GQ:DP        1/0:100:35      1/0:92:28       1/0:100:74
+9      8891758 rs1897671       G       C       .       PASS    AA=C;DP=125     GT:GQ:DP        1/0:100:35      1/0:93:25       1/0:100:64
+20     34306636        rs6060874       G       A       .       PASS    AA=A;DP=123     GT:GQ:DP        1/0:100:35      1/0:95:16       1/0:100:71
+2      10902801        rs2969888       T       C       .       PASS    AA=T;DP=143     GT:GQ:DP        1/0:100:35      1/0:97:28       1/0:100:81
+7      3059081 rs4722377       T       G       .       PASS    AA=T;DP=132     GT:GQ:DP        1/0:100:36      1/0:100:21      1/0:100:78
+7      155037611       .       T       C       .       PASS    AA=T;DP=157     GT:GQ:DP        1/0:100:36      1/0:100:22      1/0:100:60
+9      94787210        rs7850247       T       C       .       PASS    AA=T;DP=122     GT:GQ:DP        1/0:100:36      1/0:100:22      1/0:100:65
+13     74240713        rs1547675       G       A       .       PASS    AA=g;DP=135     GT:GQ:DP        1/0:100:36      1/0:100:23      1/0:100:74
+3      54884144        rs60490870      G       A       .       PASS    AA=G;DP=111     GT:GQ:DP        1/0:100:36      1/0:100:25      1/0:100:38
+4      41904989        rs6822543       C       A       .       PASS    AA=C;DP=159     GT:GQ:DP        1/0:100:36      1/0:100:25      1/0:100:58
+17     4192736 rs1113857       G       A       .       PASS    AA=G;DP=138     GT:GQ:DP        1/0:100:36      1/0:100:25      1/0:100:79
+6      6267874 rs3024304       T       G       .       PASS    AA=T;DP=138     GT:GQ:DP        1/0:100:36      1/0:100:26      1/0:100:60
+8      3670962 rs11787086      G       C       .       PASS    AA=G;DP=123     GT:GQ:DP        1/0:100:36      1/0:100:26      1/0:100:61
+6      40685409        rs846514        T       G       .       PASS    AA=T;DP=148     GT:GQ:DP        1/0:100:36      1/0:100:26      1/0:100:85
+2      152604545       rs4664521       G       A       .       PASS    AA=G;DP=142     GT:GQ:DP        1/0:100:36      1/0:100:28      1/0:100:34
+7      27955928        rs757138        T       G       .       PASS    AA=G;DP=113     GT:GQ:DP        1/0:100:36      1/0:100:28      1/0:100:50
+12     40621399        rs59980396      G       C       .       PASS    AA=C;DP=135     GT:GQ:DP        1/0:100:36      1/0:100:29      1/0:100:37
+1      83673242        rs11163749      T       C       .       PASS    AA=T;DP=139;HM2 GT:GQ:DP        1/0:100:36      1/0:100:30      1/0:100:73
+16     8394059 rs57169312      G       A       .       PASS    AA=G;DP=146     GT:GQ:DP        1/0:100:36      1/0:100:30      1/0:100:81
+10     23196932        rs7097316       T       C       .       PASS    AA=T;DP=126     GT:GQ:DP        1/0:100:36      1/0:100:31      1/0:100:59
+3      53797507        rs7652251       C       A       .       PASS    AA=C;DP=170     GT:GQ:DP        1/0:100:36      1/0:100:32      1/0:100:101
+9      111891974       rs59371645      T       C       .       PASS    AA=T;DP=159     GT:GQ:DP        1/0:100:36      1/0:100:32      1/0:100:89
+22     32841965        rs7290158       T       C       .       PASS    AA=C;DP=133     GT:GQ:DP        1/0:100:36      1/0:100:33      1/0:100:64
+4      71134714        .       C       A       .       PASS    AA=C;DP=139     GT:GQ:DP        1/0:100:36      1/0:100:34      1/0:100:70
+1      38512429        rs7515168       T       C       .       PASS    AA=T;DP=136;HM2 GT:GQ:DP        1/0:100:36      1/0:100:35      1/0:100:66
+1      160863624       rs61810404      T       A       .       PASS    AA=T;DP=126     GT:GQ:DP        1/0:100:36      1/0:100:37      1/0:100:48
+10     73722019        rs7099642       G       C       .       PASS    AA=C;DP=131     GT:GQ:DP        1/0:100:36      1/0:18:22       1/0:100:67
+4      82708271        rs10035092      T       G       .       PASS    AA=T;DP=124     GT:GQ:DP        1/0:100:36      1/0:22:14       1/0:100:76
+8      37253395        rs369863        G       A       .       PASS    AA=G;DP=109     GT:GQ:DP        1/0:100:36      1/0:29:13       1/0:100:60
+11     63574375        rs477400        G       C       .       PASS    AA=G;DP=138     GT:GQ:DP        1/0:100:36      1/0:32:14       1/0:100:44
+20     57284353        rs910098        G       A       .       PASS    AA=A;DP=133     GT:GQ:DP        1/0:100:36      1/0:42:16       1/0:100:81
+1      59260964        rs4912208       T       A       .       PASS    AA=T;DP=150     GT:GQ:DP        1/0:100:36      1/0:44:25       1/0:62:43
+16     88301897        rs1110331       G       A       .       PASS    AA=G;DP=133     GT:GQ:DP        1/0:100:36      1/0:46:12       1/0:100:84
+4      16752349        rs60281935      G       A       .       PASS    AA=G;DP=113     GT:GQ:DP        1/0:100:36      1/0:46:14       1/0:100:63
+16     76455709        .       G       A       .       PASS    AA=G;DP=124     GT:GQ:DP        1/0:100:36      1/0:48:18       1/0:100:70
+20     33680797        rs6060519       G       A       .       PASS    AA=A;DP=136     GT:GQ:DP        1/0:100:36      1/0:63:19       1/0:100:84
+16     26292646        rs62033218      T       C       .       PASS    AA=t;DP=136     GT:GQ:DP        1/0:100:36      1/0:67:16       1/0:100:92
+19     9421133 rs6512136       G       A       .       PASS    AA=G;DP=110     GT:GQ:DP        1/0:100:36      1/0:71:22       1/0:100:55
+13     112562426       .       G       A       .       PASS    AA=G;DP=119     GT:GQ:DP        1/0:100:36      1/0:71:23       1/0:100:61
+2      127971206       .       G       A       .       PASS    AA=g;DP=115     GT:GQ:DP        1/0:100:36      1/0:72:16       1/0:100:61
+20     25684308        .       G       C       .       PASS    AA=.;DP=165     GT:GQ:DP        1/0:100:36      1/0:75:47       1/0:100:82
+20     16533314        rs928624        T       C       .       PASS    AA=C;DP=132     GT:GQ:DP        1/0:100:36      1/0:76:24       1/0:100:72
+22     42270472        rs737770        G       C       .       PASS    AA=G;DP=148     GT:GQ:DP        1/0:100:36      1/0:77:26       1/0:100:86
+11     110175654       rs226100        T       G       .       PASS    AA=T;DP=125     GT:GQ:DP        1/0:100:36      1/0:84:16       1/0:100:73
+1      47815191        rs2457048       G       A       .       PASS    AA=A;DP=144;HM2 GT:GQ:DP        1/0:100:36      1/0:85:17       1/0:100:93
+8      131345214       rs1978550       T       C       .       PASS    AA=C;DP=163     GT:GQ:DP        1/0:100:36      1/0:90:29       1/0:100:52
+5      177650779       rs890809        C       A       .       PASS    AA=C;DP=114     GT:GQ:DP        1/0:100:36      1/0:93:20       1/0:100:44
+11     11215705        rs7120631       T       C       .       PASS    AA=N;DP=121     GT:GQ:DP        1/0:100:36      1/0:93:28       1/0:100:56
+2      233658509       rs4356648       C       A       .       PASS    AA=C;DP=152     GT:GQ:DP        1/0:100:36      1/0:95:20       1/0:100:41
+7      75126388        rs2097793       T       G       .       PASS    AA=G;DP=131     GT:GQ:DP        1/0:100:36      1/0:99:20       1/0:100:77
+4      142584678       .       G       A       .       PASS    AA=G;DP=109     GT:GQ:DP        1/0:100:36      1/0:99:26       1/0:100:48
+11     19527078        rs16936962      T       G       .       PASS    AA=T;DP=142     GT:GQ:DP        1/0:100:37      1/0:100:18      1/0:100:40
+1      170883614       rs1041907       T       C       .       PASS    AA=C;DP=110     GT:GQ:DP        1/0:100:37      1/0:100:19      1/0:100:54
+13     45383950        rs2573284       T       C       .       PASS    AA=t;DP=143     GT:GQ:DP        1/0:100:37      1/0:100:21      1/0:100:85
+2      26588096        rs13014684      T       G       .       PASS    AA=G;DP=153     GT:GQ:DP        1/0:100:37      1/0:100:22      1/0:100:83
+7      6708241 .       G       C       .       PASS    AA=.;DP=138     GT:GQ:DP        1/0:100:37      1/0:100:24      1/0:100:79
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+6      157333854       .       T       C       .       PASS    AA=T;DP=132     GT:GQ:DP        1/0:100:37      1/0:100:25      1/0:100:69
+17     23240217        rs7224724       T       C       .       PASS    AA=C;DP=160     GT:GQ:DP        1/0:100:37      1/0:100:27      1/0:100:98
+9      1258635 rs7033618       G       C       .       PASS    AA=g;DP=151     GT:GQ:DP        1/0:100:37      1/0:100:28      1/0:100:85
+11     57990621        rs58899483      G       A       .       PASS    AA=G;DP=156     GT:GQ:DP        1/0:100:37      1/0:100:29      1/0:100:49
+8      65092271        rs13273889      T       C       .       PASS    AA=C;DP=146     GT:GQ:DP        1/0:100:37      1/0:100:29      1/0:100:79
+3      185675749       rs9823910       T       C       .       PASS    AA=C;DP=146     GT:GQ:DP        1/0:100:37      1/0:100:29      1/0:100:81
+7      104298690       rs57437921      C       A       .       PASS    AA=C;DP=146     GT:GQ:DP        1/0:100:37      1/0:100:30      1/0:100:81
+15     97698439        rs8040850       G       A       .       PASS    AA=G;DP=157     GT:GQ:DP        1/0:100:37      1/0:100:31      1/0:100:90
+22     22312186        rs17003000      G       A       .       PASS    AA=g;DP=111     GT:GQ:DP        1/0:100:37      1/0:37:13       1/0:100:51
+5      162131084       rs62398126      T       C       .       PASS    AA=T;DP=106     GT:GQ:DP        1/0:100:37      1/0:42:18       1/0:100:50
+2      26631101        rs4665879       T       C       .       PASS    AA=T;DP=159     GT:GQ:DP        1/0:100:37      1/0:44:22       1/0:100:56
+6      39241544        rs12525011      G       A       .       PASS    AA=G;DP=145     GT:GQ:DP        1/0:100:37      1/0:48:23       1/0:100:45
+3      198060506       rs4916561       G       A       .       PASS    AA=N;DP=146     GT:GQ:DP        1/0:100:37      1/0:55:27       1/0:100:83
+4      114697931       rs11724156      T       C       .       PASS    AA=C;DP=146     GT:GQ:DP        1/0:100:37      1/0:57:18       1/0:100:93
+12     117343973       rs2062522       T       C       .       PASS    AA=C;DP=100     GT:GQ:DP        1/0:100:37      1/0:64:14       1/0:100:47
+3      115033872       rs12631130      G       A       .       PASS    AA=g;DP=130     GT:GQ:DP        1/0:100:37      1/0:73:16       1/0:100:75
+6      38949079        rs9380795       G       A       .       PASS    AA=A;DP=138     GT:GQ:DP        1/0:100:37      1/0:74:29       1/0:100:72
+17     32224992        .       G       A       .       PASS    AA=G;DP=128     GT:GQ:DP        1/0:100:37      1/0:75:22       1/0:100:69
+12     5532980 rs17787293      G       C       .       PASS    AA=G;DP=142     GT:GQ:DP        1/0:100:37      1/0:76:25       1/0:100:37
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+6      1000794 rs12192911      G       A       .       PASS    AA=A;DP=122     GT:GQ:DP        1/0:100:37      1/0:78:19       1/0:100:66
+15     63523254        rs11545071      T       C       .       PASS    AA=T;DP=144     GT:GQ:DP        1/0:100:37      1/0:78:24       1/0:100:84
+8      82182650        rs4237094       T       C       .       PASS    AA=C;DP=127     GT:GQ:DP        1/0:100:37      1/0:81:20       1/0:100:72
+4      3595787 rs12331915      G       A       .       PASS    AA=G;DP=178     GT:GQ:DP        1/0:100:37      1/0:81:21       1/0:100:83
+17     69405952        rs7502667       C       A       .       PASS    AA=C;DP=113     GT:GQ:DP        1/0:100:37      1/0:82:21       1/0:100:56
+1      4130834 rs12067530      G       C       .       PASS    AA=C;DP=136;HM2 GT:GQ:DP        1/0:100:37      1/0:84:22       1/0:100:78
+7      24384261        .       G       A       .       PASS    AA=G;DP=113     GT:GQ:DP        1/0:100:37      1/0:88:18       1/0:100:57
+6      71145434        rs16869142      T       A       .       PASS    AA=T;DP=122     GT:GQ:DP        1/0:100:37      1/0:88:20       1/0:100:53
+7      115424806       rs10223913      T       C       .       PASS    AA=T;DP=123     GT:GQ:DP        1/0:100:37      1/0:88:24       1/0:100:62
+7      131131522       rs6979353       G       A       .       PASS    AA=G;DP=145     GT:GQ:DP        1/0:100:37      1/0:88:26       1/0:100:44
+9      90720233        rs13297660      T       C       .       PASS    AA=C;DP=116     GT:GQ:DP        1/0:100:37      1/0:90:15       1/0:100:64
+19     50313568        rs10402479      T       C       .       PASS    AA=.;DP=129     GT:GQ:DP        1/0:100:37      1/0:93:19       1/0:100:73
+8      69920160        rs11990498      G       A       .       PASS    AA=g;DP=115     GT:GQ:DP        1/0:100:37      1/0:97:18       1/0:100:60
+10     73944222        rs12412460      T       C       .       PASS    AA=T;DP=144     GT:GQ:DP        1/0:100:37      1/0:97:28       1/0:100:84
+5      85650937        .       T       C       .       PASS    AA=N;DP=118     GT:GQ:DP        1/0:100:37      1/0:99:25       1/0:100:56
+7      37837141        .       C       A       .       PASS    AA=C;DP=130     GT:GQ:DP        1/0:100:38      1/0:100:17      1/0:100:75
+14     105994035       rs7156386       G       A       .       PASS    AA=a;DP=172     GT:GQ:DP        1/0:100:38      1/0:100:19      1/0:100:117
+15     84277327        rs6496285       C       A       .       PASS    AA=A;DP=117     GT:GQ:DP        1/0:100:38      1/0:100:22      1/0:100:56
+8      125007677       rs4871430       T       A       .       PASS    AA=T;DP=149     GT:GQ:DP        1/0:100:38      1/0:100:23      1/0:100:88
+6      156197120       rs12192663      T       C       .       PASS    AA=C;DP=125     GT:GQ:DP        1/0:100:38      1/0:100:24      1/0:100:62
+15     31795284        rs4779638       C       A       .       PASS    AA=A;DP=131     GT:GQ:DP        1/0:100:38      1/0:100:25      1/0:100:68
+16     20160221        rs4238584       T       C       .       PASS    AA=t;DP=145     GT:GQ:DP        1/0:100:38      1/0:100:25      1/0:100:81
+4      186628862       rs28581909      T       C       .       PASS    AA=C;DP=143     GT:GQ:DP        1/0:100:38      1/0:100:25      1/0:100:82
+9      103434406       rs4742820       G       A       .       PASS    AA=A;DP=148     GT:GQ:DP        1/0:100:38      1/0:100:25      1/0:100:86
+12     101142939       .       G       A       .       PASS    AA=A;DP=124     GT:GQ:DP        1/0:100:38      1/0:100:26      1/0:100:59
+10     77672660        .       T       C       .       PASS    AA=T;DP=170     GT:GQ:DP        1/0:100:38      1/0:100:27      1/0:100:53
+2      41813145        rs4142228       G       A       .       PASS    AA=A;DP=158     GT:GQ:DP        1/0:100:38      1/0:100:28      1/0:100:57
+1      215303424       rs1416527       G       A       .       PASS    AA=A;DP=135;HM2;HM3     GT:GQ:DP        1/0:100:38      1/0:100:29      1/0:100:71
+14     33811428        rs1958598       T       C       .       PASS    AA=C;DP=145     GT:GQ:DP        1/0:100:38      1/0:100:29      1/0:100:73
+1      92949466        rs6680578       T       A       .       PASS    AA=T;DP=146;HM2;HM3     GT:GQ:DP        1/0:100:38      1/0:100:30      1/0:100:40
+1      199848232       rs677093        G       A       .       PASS    AA=A;DP=158     GT:GQ:DP        1/0:100:38      1/0:100:33      1/0:100:86
+6      57398444        rs35444204      T       C       .       PASS    AA=T;DP=160     GT:GQ:DP        1/0:100:38      1/0:100:35      1/0:100:89
+8      102090549       rs6468750       C       A       .       PASS    AA=A;DP=107     GT:GQ:DP        1/0:100:38      1/0:37:15       1/0:100:44
+11     33825183        rs11032423      T       C       .       PASS    AA=T;DP=136     GT:GQ:DP        1/0:100:38      1/0:48:20       1/0:100:81
+6      32407800        rs1003878       G       A       .       PASS    AA=G;DP=139     GT:GQ:DP        1/0:100:38      1/0:50:29       1/0:100:74
+4      87096907        rs2118043       T       A       .       PASS    AA=T;DP=120     GT:GQ:DP        1/0:100:38      1/0:54:15       1/0:100:55
+2      235241238       rs940953        G       C       .       PASS    AA=C;DP=136     GT:GQ:DP        1/0:100:38      1/0:55:16       1/0:100:81
+3      9066946 rs2662090       T       G       .       PASS    AA=T;DP=141     GT:GQ:DP        1/0:100:38      1/0:57:24       1/0:100:80
+22     38396364        rs4821909       T       C       .       PASS    AA=C;DP=125     GT:GQ:DP        1/0:100:38      1/0:59:22       1/0:100:68
+1      5558226 rs904526        G       C       .       PASS    AA=g;DP=122;HM2 GT:GQ:DP        1/0:100:38      1/0:60:14       1/0:100:69
+18     10676131        rs9807618       T       C       .       PASS    AA=T;DP=120     GT:GQ:DP        1/0:100:38      1/0:63:21       1/0:100:64
+19     4147845 rs7256061       G       C       .       PASS    AA=G;DP=128     GT:GQ:DP        1/0:100:38      1/0:65:23       1/0:100:67
+10     61392963        rs968626        T       C       .       PASS    AA=C;DP=150     GT:GQ:DP        1/0:100:38      1/0:68:28       1/0:100:86
+12     118519919       rs10774503      G       A       .       PASS    AA=G;DP=133     GT:GQ:DP        1/0:100:38      1/0:73:22       1/0:100:71
+21     32329222        rs2833618       T       G       .       PASS    AA=G;DP=134     GT:GQ:DP        1/0:100:38      1/0:76:28       1/0:100:69
+16     8523306 rs11077315      G       C       .       PASS    AA=C;DP=130     GT:GQ:DP        1/0:100:38      1/0:80:17       1/0:100:71
+12     121199956       rs925460        T       C       .       PASS    AA=C;DP=120     GT:GQ:DP        1/0:100:38      1/0:82:18       1/0:100:65
+22     34380262        rs1540294       C       A       .       PASS    AA=A;DP=152     GT:GQ:DP        1/0:100:38      1/0:89:29       1/0:100:88
+15     51758172        rs515611        T       G       .       PASS    AA=G;DP=138     GT:GQ:DP        1/0:100:38      1/0:91:16       1/0:100:84
+19     24092680        rs10403647      G       A       .       PASS    AA=G;DP=133     GT:GQ:DP        1/0:100:38      1/0:93:36       1/0:100:60
+5      167875176       rs12520552      G       A       .       PASS    AA=A;DP=147     GT:GQ:DP        1/0:100:38      1/0:97:29       1/0:100:78
+3      162232286       rs16831796      T       A       .       PASS    AA=N;DP=124     GT:GQ:DP        1/0:100:39      1/0:100:21      1/0:100:65
+8      128666686       rs6415496       T       A       .       PASS    AA=T;DP=146     GT:GQ:DP        1/0:100:39      1/0:100:21      1/0:100:89
+4      153778918       rs4696332       T       C       .       PASS    AA=T;DP=158     GT:GQ:DP        1/0:100:39      1/0:100:24      1/0:100:56
+15     43423959        rs12439274      T       C       .       PASS    AA=C;DP=150     GT:GQ:DP        1/0:100:39      1/0:100:24      1/0:100:86
+5      115422216       rs6880244       G       C       .       PASS    AA=C;DP=166     GT:GQ:DP        1/0:100:39      1/0:100:25      1/0:100:55
+20     5015930 rs4142245       T       C       .       PASS    AA=C;DP=155     GT:GQ:DP        1/0:100:39      1/0:100:25      1/0:100:91
+8      9813504 rs587162        G       C       .       PASS    AA=G;DP=156     GT:GQ:DP        1/0:100:39      1/0:100:26      1/0:100:92
+10     100304329       rs7907389       G       A       .       PASS    AA=G;DP=122     GT:GQ:DP        1/0:100:39      1/0:100:27      1/0:100:56
+4      74075477        rs10938065      T       A       .       PASS    AA=T;DP=129     GT:GQ:DP        1/0:100:39      1/0:100:28      1/0:100:63
+2      99799987        rs4621208       G       A       .       PASS    AA=G;DP=167     GT:GQ:DP        1/0:100:39      1/0:100:29      1/0:100:97
+1      35761445        rs11264169      T       C       .       PASS    AA=T;DP=144;HM3 GT:GQ:DP        1/0:100:39      1/0:100:30      1/0:100:75
+2      211342607       rs2111714       T       C       .       PASS    AA=C;DP=156     GT:GQ:DP        1/0:100:39      1/0:100:34      1/0:100:40
+16     69596203        rs1913109       T       A       .       PASS    AA=A;DP=133     GT:GQ:DP        1/0:100:39      1/0:100:34      1/0:100:51
+6      130955349       rs9375745       G       C       .       PASS    AA=N;DP=123     GT:GQ:DP        1/0:100:39      1/0:100:36      1/0:100:49
+9      129816718       rs10760523      T       C       .       PASS    AA=T;DP=122     GT:GQ:DP        1/0:100:39      1/0:10:9        1/0:100:75
+11     5960649 rs4310586       T       A       .       PASS    AA=a;DP=131     GT:GQ:DP        1/0:100:39      1/0:39:19       1/0:100:73
+12     75164951        rs2011837       T       C       .       PASS    AA=C;DP=136     GT:GQ:DP        1/0:100:39      1/0:52:23       1/0:100:73
+7      157306592       rs4144246       T       C       .       PASS    AA=C;DP=128     GT:GQ:DP        1/0:100:39      1/0:54:20       1/0:100:68
+2      15219406        rs7608570       T       C       .       PASS    AA=C;DP=148     GT:GQ:DP        1/0:100:39      1/0:56:23       1/0:100:85
+15     92930341        rs7172334       T       C       .       PASS    AA=C;DP=126     GT:GQ:DP        1/0:100:39      1/0:60:18       1/0:100:69
+10     8356535 rs10905335      T       C       .       PASS    AA=T;DP=124     GT:GQ:DP        1/0:100:39      1/0:67:17       1/0:100:69
+18     47356830        rs11660144      G       C       .       PASS    AA=G;DP=147     GT:GQ:DP        1/0:100:39      1/0:70:19       1/0:100:45
+10     71992481        rs10999401      T       G       .       PASS    AA=T;DP=122     GT:GQ:DP        1/0:100:39      1/0:76:15       1/0:100:66
+6      21604116        .       G       A       .       PASS    AA=G;DP=136     GT:GQ:DP        1/0:100:39      1/0:81:23       1/0:100:76
+7      114943804       rs1534374       G       A       .       PASS    AA=A;DP=126     GT:GQ:DP        1/0:100:39      1/0:96:20       1/0:100:69
+1      229077815       rs41305721      T       C       .       PASS    AA=C;DP=144     GT:GQ:DP        1/0:100:40      1/0:100:20      1/0:100:85
+13     100896439       .       G       A       .       PASS    AA=G;DP=152     GT:GQ:DP        1/0:100:40      1/0:100:22      1/0:100:51
+1      24753493        .       C       A       .       PASS    AA=c;DP=146     GT:GQ:DP        1/0:100:40      1/0:100:23      1/0:100:44
+10     49760635        rs34546247      G       A       .       PASS    AA=A;DP=136     GT:GQ:DP        1/0:100:40      1/0:100:23      1/0:100:77
+2      179568222       rs6730345       T       A       .       PASS    AA=A;DP=139     GT:GQ:DP        1/0:100:40      1/0:100:26      1/0:100:35
+12     122063749       rs59211448      G       C       .       PASS    AA=G;DP=119     GT:GQ:DP        1/0:100:40      1/0:100:27      1/0:100:46
+18     19512297        rs1620152       T       C       .       PASS    AA=C;DP=146     GT:GQ:DP        1/0:100:40      1/0:100:27      1/0:100:82
+16     30747230        rs8049589       T       C       .       PASS    AA=C;DP=152     GT:GQ:DP        1/0:100:40      1/0:100:30      1/0:100:83
+4      120235141       rs11939080      T       C       .       PASS    AA=t;DP=161     GT:GQ:DP        1/0:100:40      1/0:100:31      1/0:100:89
+5      29468787        .       G       A       .       PASS    AA=G;DP=170     GT:GQ:DP        1/0:100:40      1/0:100:34      1/0:100:86
+20     56054666        rs6128259       T       A       .       PASS    AA=T;DP=148     GT:GQ:DP        1/0:100:40      1/0:100:36      1/0:100:74
+12     102893256       rs2723877       T       C       .       PASS    AA=C;DP=143     GT:GQ:DP        1/0:100:40      1/0:100:37      1/0:100:67
+2      235280929       rs1470183       T       G       .       PASS    AA=T;DP=173     GT:GQ:DP        1/0:100:40      1/0:100:38      1/0:100:52
+10     7196624 .       G       A       .       PASS    AA=g;DP=137     GT:GQ:DP        1/0:100:40      1/0:28:15       1/0:100:80
+15     78052943        rs1987102       T       C       .       PASS    AA=C;DP=116     GT:GQ:DP        1/0:100:40      1/0:46:22       1/0:100:55
+6      15611675        rs10949304      G       C       .       PASS    AA=C;DP=119     GT:GQ:DP        1/0:100:40      1/0:62:16       1/0:100:65
+7      19801272        rs10155949      T       C       .       PASS    AA=t;DP=132     GT:GQ:DP        1/0:100:40      1/0:66:21       1/0:100:72
+19     52200530        rs11669745      T       G       .       PASS    AA=G;DP=141     GT:GQ:DP        1/0:100:40      1/0:6:14        1/0:100:83
+4      170930272       .       G       A       .       PASS    AA=G;DP=142     GT:GQ:DP        1/0:100:40      1/0:75:38       1/0:100:64
+12     75196960        rs11106216      T       C       .       PASS    AA=C;DP=125     GT:GQ:DP        1/0:100:40      1/0:78:24       1/0:100:64
+2      43069359        rs7593685       T       C       .       PASS    AA=T;DP=140     GT:GQ:DP        1/0:100:40      1/0:88:22       1/0:100:80
+10     29839258        rs9919377       G       A       .       PASS    AA=g;DP=127     GT:GQ:DP        1/0:100:40      1/0:90:26       1/0:100:63
+12     36735656        .       G       A       .       PASS    AA=.;DP=181     GT:GQ:DP        1/0:100:40      1/0:91:37       1/0:100:58
+9      76166467        rs10781224      T       C       .       PASS    AA=T;DP=145     GT:GQ:DP        1/0:100:40      1/0:93:25       1/0:100:71
+8      127974042       rs1878374       G       A       .       PASS    AA=G;DP=143     GT:GQ:DP        1/0:100:40      1/0:99:23       1/0:100:45
+14     105952600       .       G       A       .       PASS    AA=a;DP=149     GT:GQ:DP        1/0:100:40      1/0:9:19        1/0:100:76
+7      3497151 .       G       C       .       PASS    AA=G;DP=152     GT:GQ:DP        1/0:100:41      1/0:100:23      1/0:100:88
+9      36923965        rs4880040       G       C       .       PASS    AA=C;DP=149     GT:GQ:DP        1/0:100:41      1/0:100:26      1/0:100:83
+6      32469503        rs17202400      T       C       .       PASS    AA=-;DP=156     GT:GQ:DP        1/0:100:41      1/0:100:27      1/0:100:87
+6      33134366        rs34889247      C       A       .       PASS    AA=C;DP=132     GT:GQ:DP        1/0:100:41      1/0:100:28      1/0:100:62
+8      91719725        rs6999898       G       A       .       PASS    AA=A;DP=166     GT:GQ:DP        1/0:100:41      1/0:100:28      1/0:100:99
+6      57340250        rs12662457      C       A       .       PASS    AA=c;DP=181     GT:GQ:DP        1/0:100:41      1/0:100:30      1/0:100:58
+17     73663292        rs60102597      T       C       .       PASS    AA=t;DP=138     GT:GQ:DP        1/0:100:41      1/0:100:33      1/0:100:66
+16     81139412        rs12599108      C       A       .       PASS    AA=C;DP=153     GT:GQ:DP        1/0:100:41      1/0:100:36      1/0:100:69
+2      9916808 rs287998        G       A       .       PASS    AA=A;DP=154     GT:GQ:DP        1/0:100:41      1/0:43:34       1/0:100:80
+18     19109257        rs11873921      G       C       .       PASS    AA=C;DP=113     GT:GQ:DP        1/0:100:41      1/0:79:18       1/0:100:52
+9      125670424       rs625660        T       C       .       PASS    AA=T;DP=153     GT:GQ:DP        1/0:100:41      1/0:79:36       1/0:100:77
+6      153785770       .       T       C       .       PASS    AA=T;DP=151     GT:GQ:DP        1/0:100:41      1/0:81:31       1/0:100:78
+2      191523619       .       T       C       .       PASS    AA=T;DP=132     GT:GQ:DP        1/0:100:42      1/0:100:26      1/0:100:65
+2      30029537        rs11681977      T       C       .       PASS    AA=T;DP=165     GT:GQ:DP        1/0:100:42      1/0:100:27      1/0:100:84
+10     127721355       rs7919338       G       A       .       PASS    AA=G;DP=177     GT:GQ:DP        1/0:100:42      1/0:100:28      1/0:100:61
+10     13898227        rs7067545       G       A       .       PASS    AA=A;DP=144     GT:GQ:DP        1/0:100:42      1/0:100:30      1/0:100:69
+15     43324845        rs4775835       T       C       .       PASS    AA=T;DP=152     GT:GQ:DP        1/0:100:42      1/0:100:31      1/0:100:76
+11     48311874        .       G       A       .       PASS    AA=N;DP=172     GT:GQ:DP        1/0:100:42      1/0:100:46      1/0:100:70
+7      100385850       .       T       A       .       PASS    AA=t;DP=124     GT:GQ:DP        1/0:100:42      1/0:10:17       1/0:100:58
+1      7034977 rs6577410       T       C       .       PASS    AA=C;DP=153;HM2;HM3     GT:GQ:DP        1/0:100:42      1/0:55:17       1/0:100:52
+1      145406249       rs2644581       G       C       .       PASS    AA=G;DP=144     GT:GQ:DP        1/0:100:42      1/0:57:28       1/0:100:74
+4      77755805        rs3733246       G       C       .       PASS    AA=G;DP=141     GT:GQ:DP        1/0:100:42      1/0:66:28       1/0:100:71
+6      38901565        rs1738209       T       C       .       PASS    AA=C;DP=143     GT:GQ:DP        1/0:100:42      1/0:75:26       1/0:100:74
+6      62030949        rs1689239       C       A       .       PASS    AA=.;DP=120     GT:GQ:DP        1/0:100:42      1/0:81:21       1/0:100:58
+1      101544839       rs6658237       G       A       .       PASS    AA=G;DP=154;HM2;HM3     GT:GQ:DP        1/0:100:42      1/0:82:25       1/0:100:87
+4      78402133        rs4859765       T       G       .       PASS    AA=N;DP=157     GT:GQ:DP        1/0:100:42      1/0:85:24       1/0:100:90
+11     87460550        rs10082649      T       C       .       PASS    AA=T;DP=154     GT:GQ:DP        1/0:100:42      1/0:90:24       1/0:100:87
+5      85176912        .       G       A       .       PASS    AA=G;DP=149     GT:GQ:DP        1/0:100:42      1/0:90:31       1/0:100:37
+12     32413427        rs11051960      G       A       .       PASS    AA=A;DP=154     GT:GQ:DP        1/0:100:42      1/0:92:23       1/0:100:87
+8      20194141        rs28590363      G       A       .       PASS    AA=G;DP=146     GT:GQ:DP        1/0:100:43      1/0:100:24      1/0:100:78
+9      126397894       rs59588696      T       C       .       PASS    AA=T;DP=163     GT:GQ:DP        1/0:100:43      1/0:100:28      1/0:100:90
+3      30716794        rs795432        G       A       .       PASS    AA=A;DP=138     GT:GQ:DP        1/0:100:43      1/0:100:31      1/0:100:64
+4      76444961        rs10023045      T       C       .       PASS    AA=N;DP=124     GT:GQ:DP        1/0:100:43      1/0:31:20       1/0:100:59
+7      57618812        rs11982070      G       A       .       PASS    AA=A;DP=144     GT:GQ:DP        1/0:100:43      1/0:55:34       1/0:71:52
+14     105938578       .       G       A       .       PASS    AA=g;DP=147     GT:GQ:DP        1/0:100:43      1/0:57:20       1/0:100:69
+2      16808408        rs12473034      G       C       .       PASS    AA=G;DP=129     GT:GQ:DP        1/0:100:43      1/0:64:22       1/0:100:67
+22     36303879        rs2284056       G       A       .       PASS    AA=G;DP=132     GT:GQ:DP        1/0:100:43      1/0:72:25       1/0:100:64
+14     99121767        rs8020049       G       C       .       PASS    AA=G;DP=156     GT:GQ:DP        1/0:100:43      1/0:83:24       1/0:100:88
+10     5970585 rs6602322       G       A       .       PASS    AA=A;DP=152     GT:GQ:DP        1/0:100:44      1/0:100:18      1/0:100:90
+7      8281641 rs4620183       C       A       .       PASS    AA=C;DP=144     GT:GQ:DP        1/0:100:44      1/0:100:20      1/0:100:77
+5      171997150       .       G       A       .       PASS    AA=G;DP=120     GT:GQ:DP        1/0:100:44      1/0:100:23      1/0:100:53
+13     35430567        rs61948261      T       C       .       PASS    AA=t;DP=170     GT:GQ:DP        1/0:100:44      1/0:100:32      1/0:100:89
+6      57716210        .       T       G       .       PASS    AA=T;DP=173     GT:GQ:DP        1/0:100:44      1/0:52:35       1/0:100:97
+4      124892388       rs10028082      G       C       .       PASS    AA=G;DP=119     GT:GQ:DP        1/0:100:44      1/0:71:17       1/0:100:57
+16     78001460        rs4613078       C       A       .       PASS    AA=A;DP=144     GT:GQ:DP        1/0:100:44      1/0:86:25       1/0:100:74
+7      138046665       rs12707395      G       A       .       PASS    AA=G;DP=150     GT:GQ:DP        1/0:100:44      1/0:92:20       1/0:100:88
+10     21331636        rs3858199       G       A       .       PASS    AA=A;DP=138     GT:GQ:DP        1/0:100:44      1/0:93:21       1/0:100:73
+17     13128089        rs8080781       C       A       .       PASS    AA=C;DP=141     GT:GQ:DP        1/0:100:45      1/0:100:31      1/0:100:66
+1      208011167       .       G       A       .       PASS    AA=g;DP=171     GT:GQ:DP        1/0:100:45      1/0:45:28       1/0:100:57
+2      132775319       .       C       A       .       PASS    AA=a;DP=157     GT:GQ:DP        1/0:100:46      1/0:100:28      1/0:100:84
+1      17432976        rs4920576       T       A       .       PASS    AA=T;DP=132;HM2 GT:GQ:DP        1/0:100:46      1/0:31:21       1/0:100:56
+12     55301509        rs12321709      T       C       .       PASS    AA=T;DP=157     GT:GQ:DP        1/0:100:46      1/0:64:27       1/0:100:80
+20     525709  rs6116718       G       A       .       PASS    AA=G;DP=152     GT:GQ:DP        1/0:100:46      1/0:98:25       1/0:100:83
+15     29286100        rs278353        G       C       .       PASS    AA=C;DP=137     GT:GQ:DP        1/0:100:47      1/0:72:16       1/0:100:72
+8      103726642       rs1991934       T       C       .       PASS    AA=T;DP=143     GT:GQ:DP        1/0:100:47      1/0:89:28       1/0:100:66
+5      14172775        rs32979 T       C       .       PASS    AA=t;DP=146     GT:GQ:DP        1/0:100:47      1/0:91:23       1/0:100:78
+17     25741844        rs4055617       T       C       .       PASS    AA=C;DP=142     GT:GQ:DP        1/0:100:48      1/0:100:19      1/0:100:77
+6      112916971       rs1276584       G       A       .       PASS    AA=G;DP=138     GT:GQ:DP        1/0:100:48      1/0:100:28      1/0:100:64
+12     47912306        rs10875937      C       A       .       PASS    AA=A;DP=149     GT:GQ:DP        1/0:100:48      1/0:52:20       1/0:100:39
+1      46464208        rs953070        T       C       .       PASS    AA=T;DP=161;HM3 GT:GQ:DP        1/0:100:48      1/0:98:27       1/0:100:85
+19     49735650        .       G       C       .       PASS    AA=N;DP=183     GT:GQ:DP        1/0:100:49      1/0:100:26      1/0:100:55
+3      99779472        rs12496562      G       A       .       PASS    AA=G;DP=144     GT:GQ:DP        1/0:100:49      1/0:80:24       1/0:100:68
+18     45920970        rs1623594       G       A       .       PASS    AA=A;DP=162     GT:GQ:DP        1/0:100:50      1/0:100:27      1/0:100:40
+9      117024589       rs10513266      G       C       .       PASS    AA=G;DP=161     GT:GQ:DP        1/0:100:50      1/0:100:28      1/0:100:38
+9      100095025       .       T       C       .       PASS    AA=T;DP=164     GT:GQ:DP        1/0:100:50      1/0:84:28       1/0:100:45
+12     6120257 rs12322958      T       C       .       PASS    AA=C;DP=159     GT:GQ:DP        1/0:100:51      1/0:100:22      1/0:100:84
+12     102545393       rs703618        G       A       .       PASS    AA=G;DP=129     GT:GQ:DP        1/0:100:51      1/0:56:9        1/0:100:70
+16     82663207        rs11642644      T       C       .       PASS    AA=T;DP=120     GT:GQ:DP        1/0:100:52      1/0:71:19       1/0:100:37
+1      228980852       rs12724252      T       C       .       PASS    AA=C;DP=162;HM2;HM3     GT:GQ:DP        1/0:100:53      1/0:84:23       1/0:100:87
+14     79770842        rs10140980      T       C       .       PASS    AA=T;DP=91      GT:GQ:DP        1/0:12:15       1/0:36:16       1/0:100:60
+7      28644502        .       T       C       .       PASS    AA=T;DP=94      GT:GQ:DP        1/0:12:26       1/0:61:14       1/0:100:54
+6      31404755        rs9265463       C       A       .       PASS    AA=c;DP=99      GT:GQ:DP        1/0:12:8        1/0:57:26       1/0:100:63
+20     26011198        .       T       A       .       PASS    AA=-;DP=168     GT:GQ:DP        1/0:13:27       1/0:96:32       1/0:66:53
+7      41645040        rs60151180      G       A       .       PASS    AA=G;DP=61      GT:GQ:DP        1/0:14:15       1/0:61:11       1/0:100:22
+17     9258009 .       T       C       .       PASS    AA=T;DP=154     GT:GQ:DP        1/0:14:36       1/0:56:31       1/0:100:91
+10     124903898       .       C       A       .       PASS    AA=c;DP=115     GT:GQ:DP        1/0:15:24       1/0:48:17       1/0:100:76
+17     77040153        rs4993645       C       A       .       PASS    AA=c;DP=62      GT:GQ:DP        1/0:16:20       1/0:45:11       1/0:66:27
+2      241484813       rs10933516      T       C       .       PASS    AA=t;DP=57      GT:GQ:DP        1/0:17:13       1/0:28:8        1/0:66:28
+8      48168271        rs10282752      T       C       .       PASS    AA=.;DP=96      GT:GQ:DP        1/0:18:16       1/0:69:15       1/0:100:67
+2      149771747       rs13411092      T       C       .       PASS    AA=T;DP=94      GT:GQ:DP        1/0:18:18       1/0:100:26      1/0:100:50
+1      148598217       rs1260374       G       A       .       PASS    AA=A;DP=75;HM2  GT:GQ:DP        1/0:18:30       1/0:59:8        1/0:100:38
+13     91115715        rs16946459      G       C       .       PASS    AA=C;DP=112     GT:GQ:DP        1/0:20:23       1/0:6:10        1/0:100:77
+1      36758841        rs11801674      G       C       .       PASS    AA=G;DP=114;HM2 GT:GQ:DP        1/0:20:31       1/0:70:14       1/0:100:63
+X      124925820       .       G       A       .       PASS    AA=G;DP=52      GT:GQ:DP        1/0:22:9        1/0:44:14       1/0:52:17
+5      35749988        .       G       C       .       PASS    AA=C;DP=65      GT:GQ:DP        1/0:23:10       1/0:56:9        1/0:100:46
+5      134402776       rs1700488       G       A       .       PASS    AA=G;DP=77      GT:GQ:DP        1/0:23:28       1/0:15:7        1/0:100:34
+15     70876678        rs6495017       T       A       .       PASS    AA=T;DP=83      GT:GQ:DP        1/0:25:15       1/0:54:16       1/0:100:42
+7      125888362       rs2283061       G       A       .       PASS    AA=G;DP=114     GT:GQ:DP        1/0:25:17       1/0:100:27      1/0:100:72
+5      128998480       rs30694 T       G       .       PASS    AA=G;DP=100     GT:GQ:DP        1/0:26:26       1/0:17:16       1/0:100:53
+2      3114697 rs7569266       T       C       .       PASS    AA=C;DP=123     GT:GQ:DP        1/0:27:18       1/0:52:12       1/0:100:96
+10     121494501       .       T       A       .       PASS    AA=t;DP=96      GT:GQ:DP        1/0:28:13       1/0:81:31       1/0:100:40
+15     95775178        .       G       C       .       PASS    AA=G;DP=101     GT:GQ:DP        1/0:28:14       1/0:100:23      1/0:100:63
+9      10622596        rs2890924       T       G       .       PASS    AA=G;DP=76      GT:GQ:DP        1/0:28:15       1/0:13:17       1/0:100:44
+X      858304  .       C       A       .       PASS    AA=.;DP=89      GT:GQ:DP        1/0:29:19       1/0:31:12       1/0:100:42
+20     37124366        rs2867898       G       A       .       PASS    AA=G;DP=101     GT:GQ:DP        1/0:29:24       1/0:50:22       1/0:100:56
+2      170765852       .       T       G       .       PASS    AA=T;DP=121     GT:GQ:DP        1/0:29:26       1/0:72:25       1/0:100:72
+2      115897567       rs843380        T       C       .       PASS    AA=T;DP=104     GT:GQ:DP        1/0:30:13       1/0:100:25      1/0:100:54
+1      29268805        rs10753332      T       C       .       PASS    AA=C;DP=90      GT:GQ:DP        1/0:31:24       1/0:45:19       1/0:100:47
+4      190180069       rs35655752      G       A       .       PASS    AA=G;DP=132     GT:GQ:DP        1/0:31:33       1/0:91:22       1/0:100:78
+18     62056857        rs9952004       T       G       .       PASS    AA=N;DP=83      GT:GQ:DP        1/0:32:15       1/0:83:19       1/0:100:48
+18     23701904        rs10469045      T       C       .       PASS    AA=T;DP=81      GT:GQ:DP        1/0:33:17       1/0:60:16       1/0:100:48
+2      1421190 rs11888196      G       C       .       PASS    AA=C;DP=77      GT:GQ:DP        1/0:33:19       1/0:3:12        1/0:100:47
+15     89428856        .       G       A       .       PASS    AA=A;DP=105     GT:GQ:DP        1/0:33:23       1/0:69:29       1/0:100:54
+4      5466155 rs195108        G       A       .       PASS    AA=A;DP=114     GT:GQ:DP        1/0:34:18       1/0:100:23      1/0:100:73
+1      189326058       rs56179515      G       A       .       PASS    AA=G;DP=110     GT:GQ:DP        1/0:34:18       1/0:66:20       1/0:100:73
+13     88029304        rs9521387       G       A       .       PASS    AA=G;DP=111     GT:GQ:DP        1/0:34:23       1/0:13:16       1/0:100:71
+10     13290096        rs11258250      T       G       .       PASS    AA=g;DP=96      GT:GQ:DP        1/0:34:27       1/0:32:14       1/0:100:49
+3      603533  rs4992931       G       A       .       PASS    AA=A;DP=175     GT:GQ:DP        1/0:34:43       1/0:65:30       1/0:100:53
+6      66675571        rs9354340       T       G       .       PASS    AA=G;DP=62      GT:GQ:DP        1/0:35:10       1/0:45:17       1/0:100:32
+10     67376858        rs10996785      T       G       .       PASS    AA=t;DP=84      GT:GQ:DP        1/0:35:13       1/0:100:34      1/0:100:27
+2      40391788        .       T       C       .       PASS    AA=T;DP=83      GT:GQ:DP        1/0:35:14       1/0:96:15       1/0:100:55
+1      100768921       rs7520540       T       A       .       PASS    AA=T;DP=117;HM2 GT:GQ:DP        1/0:35:20       1/0:100:25      1/0:100:70
+6      105333215       .       T       A       .       PASS    AA=T;DP=107     GT:GQ:DP        1/0:35:26       1/0:95:25       1/0:100:44
+10     41828784        .       C       A       .       PASS    AA=.;DP=150     GT:GQ:DP        1/0:35:36       1/0:89:39       1/0:100:74
+17     21951011        rs57846925      G       C       .       PASS    AA=g;DP=117     GT:GQ:DP        1/0:36:25       1/0:100:19      1/0:100:75
+9      95419249        .       G       A       .       PASS    AA=-;DP=128     GT:GQ:DP        1/0:36:37       1/0:81:27       1/0:35:64
+6      1437477 .       G       A       .       PASS    AA=G;DP=73      GT:GQ:DP        1/0:37:12       1/0:17:12       1/0:100:51
+8      122281903       .       G       C       .       PASS    AA=C;DP=89      GT:GQ:DP        1/0:37:18       1/0:77:21       1/0:100:47
+6      3095013 rs13207602      T       C       .       PASS    AA=C;DP=100     GT:GQ:DP        1/0:37:22       1/0:52:14       1/0:100:55
+13     112417708       .       C       A       .       PASS    AA=c;DP=105     GT:GQ:DP        1/0:37:25       1/0:6:14        1/0:100:75
+2      119597984       rs13407729      T       C       .       PASS    AA=C;DP=142     GT:GQ:DP        1/0:37:29       1/0:63:23       1/0:100:86
+10     49792187        rs7094610       C       A       .       PASS    AA=C;DP=143     GT:GQ:DP        1/0:37:34       1/0:97:26       1/0:100:42
+1      46231030        .       G       A       .       PASS    AA=G;DP=103     GT:GQ:DP        1/0:39:27       1/0:79:20       1/0:100:56
+18     11549059        rs9303740       T       C       .       PASS    AA=T;DP=115     GT:GQ:DP        1/0:3:17        1/0:100:26      1/0:100:71
+3      104880611       rs12488655      G       A       .       PASS    AA=A;DP=67      GT:GQ:DP        1/0:40:13       1/0:68:17       1/0:100:37
+7      13667035        rs10216053      T       C       .       PASS    AA=C;DP=89      GT:GQ:DP        1/0:40:15       1/0:7:19        1/0:100:55
+2      236278125       rs56201314      G       A       .       PASS    AA=A;DP=105     GT:GQ:DP        1/0:40:27       1/0:50:14       1/0:100:64
+6      110213295       rs10499055      G       A       .       PASS    AA=G;DP=93      GT:GQ:DP        1/0:41:13       1/0:71:17       1/0:100:63
+2      80507376        rs56099623      T       C       .       PASS    AA=T;DP=89      GT:GQ:DP        1/0:41:17       1/0:9:9 1/0:100:62
+12     39613693        rs55976072      T       G       .       PASS    AA=T;DP=91      GT:GQ:DP        1/0:41:21       1/0:100:21      1/0:100:36
+1      44302627        rs12124324      G       A       .       PASS    AA=G;DP=86;HM2  GT:GQ:DP        1/0:42:12       1/0:100:23      1/0:100:54
+16     79746112        rs34196884      G       A       .       PASS    AA=G;DP=116     GT:GQ:DP        1/0:42:22       1/0:100:20      1/0:100:34
+1      112786793       rs2492530       T       G       .       PASS    AA=T;DP=137;HM2 GT:GQ:DP        1/0:42:31       1/0:95:25       1/0:100:39
+14     86217874        rs1953527       T       G       .       PASS    AA=G;DP=123     GT:GQ:DP        1/0:43:19       1/0:99:28       1/0:100:77
+6      67422257        rs4263569       T       C       .       PASS    AA=C;DP=66      GT:GQ:DP        1/0:43:22       1/0:7:6 1/0:100:34
+12     50002665        rs35854730      T       G       .       PASS    AA=t;DP=112     GT:GQ:DP        1/0:43:29       1/0:13:20       1/0:100:63
+19     4679964 rs764271        T       A       .       PASS    AA=A;DP=154     GT:GQ:DP        1/0:43:33       1/0:55:24       1/0:100:58
+15     52910203        rs7172738       G       A       .       PASS    AA=g;DP=132     GT:GQ:DP        1/0:43:37       1/0:100:25      1/0:100:69
+1      164711369       rs10918478      T       C       .       PASS    AA=C;DP=110;HM2;HM3     GT:GQ:DP        1/0:44:13       1/0:35:24       1/0:100:73
+13     101175100       rs7318046       T       C       .       PASS    AA=T;DP=74      GT:GQ:DP        1/0:44:14       1/0:60:15       1/0:100:46
+6      92515780        rs1983741       G       A       .       PASS    AA=A;DP=89      GT:GQ:DP        1/0:44:19       1/0:97:14       1/0:100:56
+17     7500402 rs1641511       G       A       .       PASS    AA=A;DP=130     GT:GQ:DP        1/0:44:26       1/0:83:19       1/0:100:45
+6      162841993       rs6918583       G       A       .       PASS    AA=G;DP=82      GT:GQ:DP        1/0:45:11       1/0:64:18       1/0:100:51
+7      113704775       rs1209254       T       C       .       PASS    AA=C;DP=80      GT:GQ:DP        1/0:45:14       1/0:90:18       1/0:100:47
+16     83703540        rs9940839       G       C       .       PASS    AA=G;DP=77      GT:GQ:DP        1/0:45:18       1/0:48:13       1/0:100:40
+6      93397094        rs783618        T       C       .       PASS    AA=C;DP=78      GT:GQ:DP        1/0:46:12       1/0:82:19       1/0:100:47
+10     3758173 rs4001951       T       C       .       PASS    AA=T;DP=112     GT:GQ:DP        1/0:46:19       1/0:100:26      1/0:100:66
+1      27581607        rs2504779       T       C       .       PASS    AA=C;DP=84;HM2;HM3      GT:GQ:DP        1/0:46:19       1/0:29:9        1/0:100:56
+7      21330612        rs1637311       T       A       .       PASS    AA=A;DP=102     GT:GQ:DP        1/0:46:21       1/0:95:22       1/0:100:61
+7      63990727        rs871076        C       A       .       PASS    AA=C;DP=130     GT:GQ:DP        1/0:46:22       1/0:28:15       1/0:100:93
+14     102887657       rs8003159       T       C       .       PASS    AA=C;DP=98      GT:GQ:DP        1/0:46:27       1/0:21:9        1/0:100:63
+1      34854492        rs956848        G       A       .       PASS    AA=A;DP=138     GT:GQ:DP        1/0:46:27       1/0:58:21       1/0:100:34
+5      123699573       rs12109643      T       G       .       PASS    AA=T;DP=80      GT:GQ:DP        1/0:47:13       1/0:85:26       1/0:100:29
+15     87929838        rs11639246      G       A       .       PASS    AA=G;DP=88      GT:GQ:DP        1/0:47:22       1/0:75:16       1/0:100:51
+6      84258505        .       T       G       .       PASS    AA=T;DP=135     GT:GQ:DP        1/0:47:24       1/0:96:33       1/0:100:80
+9      91196095        rs28377168      G       A       .       PASS    AA=G;DP=140     GT:GQ:DP        1/0:47:38       1/0:74:22       1/0:100:81
+3      78686977        rs9682630       G       A       .       PASS    AA=G;DP=128     GT:GQ:DP        1/0:48:15       1/0:100:36      1/0:100:74
+11     69647118        rs1893085       T       C       .       PASS    AA=T;DP=79      GT:GQ:DP        1/0:48:17       1/0:35:11       1/0:100:52
+4      59976077        rs9995709       G       A       .       PASS    AA=G;DP=75      GT:GQ:DP        1/0:48:18       1/0:15:9        1/0:100:49
+1      56931724        rs1418442       T       C       .       PASS    AA=T;DP=65;HM2;HM3      GT:GQ:DP        1/0:48:6        1/0:24:19       1/0:100:40
+14     45602775        .       G       A       .       PASS    AA=G;DP=93      GT:GQ:DP        1/0:49:20       1/0:89:18       1/0:100:58
+4      135515874       rs6835373       T       G       .       PASS    AA=g;DP=104     GT:GQ:DP        1/0:49:24       1/0:98:20       1/0:100:59
+4      43640321        rs1947678       G       A       .       PASS    AA=A;DP=73      GT:GQ:DP        1/0:49:26       1/0:5:9 1/0:100:38
+12     82974955        rs7301909       T       C       .       PASS    AA=T;DP=108     GT:GQ:DP        1/0:4:24        1/0:19:18       1/0:100:67
+X      58487381        .       T       A       .       PASS    AA=.;DP=125     GT:GQ:DP        1/0:4:30        1/0:61:28       1/0:100:52
+13     30304907        rs9670610       T       C       .       PASS    AA=T;DP=59      GT:GQ:DP        1/0:50:11       1/0:43:10       1/0:49:26
+8      14550825        rs1470201       T       C       .       PASS    AA=T;DP=94      GT:GQ:DP        1/0:50:19       1/0:100:20      1/0:100:57
+21     33616345        .       T       C       .       PASS    AA=t;DP=91      GT:GQ:DP        1/0:50:19       1/0:7:24        1/0:100:38
+7      146954301       .       T       C       .       PASS    AA=T;DP=101     GT:GQ:DP        1/0:50:24       1/0:68:15       1/0:100:61
+9      19690135        rs7848178       T       C       .       PASS    AA=T;DP=110     GT:GQ:DP        1/0:50:26       1/0:93:29       1/0:100:45
+10     113598453       rs1592663       T       C       .       PASS    AA=C;DP=125     GT:GQ:DP        1/0:50:29       1/0:98:23       1/0:100:72
+2      154093196       rs28875543      T       G       .       PASS    AA=T;DP=68      GT:GQ:DP        1/0:51:13       1/0:53:15       1/0:100:28
+5      15384850        .       C       A       .       PASS    AA=c;DP=68      GT:GQ:DP        1/0:51:13       1/0:71:18       1/0:100:27
+4      66696308        rs2614877       T       C       .       PASS    AA=C;DP=81      GT:GQ:DP        1/0:51:14       1/0:32:12       1/0:100:56
+1      216038856       rs11117941      T       C       .       PASS    AA=N;DP=63      GT:GQ:DP        1/0:51:16       1/0:11:12       1/0:46:25
+2      543605  .       T       C       .       PASS    AA=C;DP=62      GT:GQ:DP        1/0:51:17       1/0:16:9        1/0:40:27
+11     4720081 rs11033659      C       A       .       PASS    AA=C;DP=133     GT:GQ:DP        1/0:51:22       1/0:100:30      1/0:100:83
+8      110247681       rs4734197       T       C       .       PASS    AA=t;DP=135     GT:GQ:DP        1/0:51:24       1/0:100:38      1/0:100:75
+11     112497579       rs1079021       G       A       .       PASS    AA=G;DP=131     GT:GQ:DP        1/0:51:25       1/0:100:21      1/0:100:37
+3      75793166        rs7340626       T       G       .       PASS    AA=t;DP=167     GT:GQ:DP        1/0:51:26       1/0:15:35       1/0:61:76
+8      127294630       rs4871675       G       A       .       PASS    AA=A;DP=119     GT:GQ:DP        1/0:51:27       1/0:100:25      1/0:100:65
+11     71410698        rs4945411       G       A       .       PASS    AA=A;DP=114     GT:GQ:DP        1/0:51:35       1/0:15:21       1/0:100:57
+12     57628853        .       G       A       .       PASS    AA=G;DP=110     GT:GQ:DP        1/0:52:18       1/0:78:32       1/0:100:59
+8      59133415        .       T       C       .       PASS    AA=T;DP=103     GT:GQ:DP        1/0:52:20       1/0:29:11       1/0:61:30
+4      30693900        rs35316591      T       C       .       PASS    AA=C;DP=86      GT:GQ:DP        1/0:52:20       1/0:80:16       1/0:100:52
+11     38552325        .       T       C       .       PASS    AA=T;DP=116     GT:GQ:DP        1/0:52:22       1/0:64:28       1/0:100:65
+6      104157296       rs9386373       G       A       .       PASS    AA=G;DP=102     GT:GQ:DP        1/0:52:22       1/0:8:21        1/0:100:59
+13     80868365        rs7358983       C       A       .       PASS    AA=C;DP=103     GT:GQ:DP        1/0:52:24       1/0:81:17       1/0:100:65
+5      143839916       rs349693        T       C       .       PASS    AA=A;DP=118     GT:GQ:DP        1/0:52:29       1/0:90:30       1/0:100:61
+11     83571525        rs12808441      T       C       .       PASS    AA=T;DP=60      GT:GQ:DP        1/0:53:17       1/0:67:12       1/0:100:23
+11     105318049       rs641574        G       A       .       PASS    AA=A;DP=83      GT:GQ:DP        1/0:53:20       1/0:9:10        1/0:100:53
+1      52279658        rs2809958       T       A       .       PASS    AA=A;DP=97;HM2  GT:GQ:DP        1/0:53:26       1/0:100:24      1/0:100:47
+7      15402679        .       G       A       .       PASS    AA=G;DP=122     GT:GQ:DP        1/0:53:28       1/0:99:25       1/0:100:68
+1      193104762       rs7535168       T       A       .       PASS    AA=T;DP=70      GT:GQ:DP        1/0:53:9        1/0:94:19       1/0:100:28
+20     58247319        rs6100811       T       C       .       PASS    AA=C;DP=99      GT:GQ:DP        1/0:54:14       1/0:32:13       1/0:100:72
+3      166975311       .       T       C       .       PASS    AA=T;DP=95      GT:GQ:DP        1/0:54:15       1/0:43:15       1/0:100:66
+11     88126283        rs34096746      G       A       .       PASS    AA=G;DP=104     GT:GQ:DP        1/0:54:23       1/0:68:24       1/0:100:60
+6      75900080        rs240727        G       A       .       PASS    AA=A;DP=75      GT:GQ:DP        1/0:55:13       1/0:63:16       1/0:100:41
+7      108855538       .       G       A       .       PASS    AA=A;DP=80      GT:GQ:DP        1/0:55:13       1/0:76:20       1/0:100:45
+6      95182549        rs10944737      G       A       .       PASS    AA=A;DP=78      GT:GQ:DP        1/0:55:13       1/0:86:13       1/0:100:54
+2      123536138       rs299543        G       A       .       PASS    AA=-;DP=80      GT:GQ:DP        1/0:55:15       1/0:37:17       1/0:100:46
+2      4890119 rs10196214      T       C       .       PASS    AA=C;DP=81      GT:GQ:DP        1/0:55:15       1/0:3:11        1/0:100:55
+4      185056229       rs10031743      G       A       .       PASS    AA=G;DP=79      GT:GQ:DP        1/0:55:15       1/0:98:15       1/0:100:50
+2      5842707 rs1560242       T       C       .       PASS    AA=T;DP=105     GT:GQ:DP        1/0:55:18       1/0:24:15       1/0:100:72
+13     84550199        rs4133787       G       A       .       PASS    AA=g;DP=76      GT:GQ:DP        1/0:55:18       1/0:57:18       1/0:100:41
+14     82017527        rs12896597      C       A       .       PASS    AA=c;DP=82      GT:GQ:DP        1/0:55:21       1/0:39:16       1/0:100:45
+4      5501707 rs4688932       G       C       .       PASS    AA=C;DP=93      GT:GQ:DP        1/0:55:23       1/0:9:17        1/0:100:53
+10     18594594        rs1857423       T       C       .       PASS    AA=T;DP=109     GT:GQ:DP        1/0:55:24       1/0:76:20       1/0:100:66
+19     9521094 rs8105606       T       C       .       PASS    AA=T;DP=141     GT:GQ:DP        1/0:55:33       1/0:92:23       1/0:100:86
+8      106905586       .       G       A       .       PASS    AA=g;DP=91      GT:GQ:DP        1/0:56:19       1/0:63:18       1/0:100:56
+8      22426198        rs2461489       G       A       .       PASS    AA=G;DP=121     GT:GQ:DP        1/0:56:28       1/0:100:22      1/0:100:75
+13     89535990        rs1491011       T       C       .       PASS    AA=T;DP=98      GT:GQ:DP        1/0:57:12       1/0:79:16       1/0:100:68
+19     22453942        rs8109219       G       A       .       PASS    AA=g;DP=81      GT:GQ:DP        1/0:57:14       1/0:70:12       1/0:100:55
+8      3602091 rs34493359      T       C       .       PASS    AA=T;DP=101     GT:GQ:DP        1/0:57:16       1/0:61:22       1/0:100:62
+6      67635168        rs6918922       T       C       .       PASS    AA=T;DP=102     GT:GQ:DP        1/0:57:23       1/0:26:20       1/0:100:60
+6      31470313        rs1052405       G       C       .       PASS    AA=N;DP=66      GT:GQ:DP        1/0:57:33       1/0:5:2 1/0:32:30
+7      78641694        rs10953786      G       A       .       PASS    AA=A;DP=79      GT:GQ:DP        1/0:58:16       1/0:100:13      1/0:100:50
+5      128924368       rs7447262       T       C       .       PASS    AA=C;DP=108     GT:GQ:DP        1/0:58:19       1/0:50:21       1/0:100:69
+3      57046069        rs752466        G       A       .       PASS    AA=G;DP=124     GT:GQ:DP        1/0:58:21       1/0:56:22       1/0:100:77
+6      82676660        rs57037663      T       C       .       PASS    AA=T;DP=112     GT:GQ:DP        1/0:58:22       1/0:100:19      1/0:100:71
+8      17424194        rs10106501      G       C       .       PASS    AA=C;DP=65      GT:GQ:DP        1/0:58:23       1/0:3:12        1/0:5:22
+8      64378427        rs10091141      G       A       .       PASS    AA=G;DP=80      GT:GQ:DP        1/0:59:10       1/0:89:15       1/0:100:55
+9      125962164       rs2767772       G       A       .       PASS    AA=A;DP=87      GT:GQ:DP        1/0:59:10       1/0:97:23       1/0:100:53
+6      52968367        rs6909523       T       C       .       PASS    AA=t;DP=107     GT:GQ:DP        1/0:59:15       1/0:16:18       1/0:100:76
+11     21379009        .       T       C       .       PASS    AA=T;DP=107     GT:GQ:DP        1/0:59:16       1/0:100:26      1/0:100:66
+18     63955139        rs9960704       G       C       .       PASS    AA=G;DP=87      GT:GQ:DP        1/0:59:22       1/0:100:20      1/0:100:30
+2      20161651        rs6710203       T       C       .       PASS    AA=N;DP=89      GT:GQ:DP        1/0:59:24       1/0:68:16       1/0:100:47
+6      135993702       rs9402729       G       A       .       PASS    AA=N;DP=127     GT:GQ:DP        1/0:59:25       1/0:95:25       1/0:100:76
+3      196336964       rs3892194       G       A       .       PASS    AA=G;DP=108     GT:GQ:DP        1/0:59:28       1/0:47:13       1/0:100:69
+6      139873674       rs635769        T       C       .       PASS    AA=T;DP=78      GT:GQ:DP        1/0:60:14       1/0:96:20       1/0:100:32
+8      15624141        rs189525        T       G       .       PASS    AA=t;DP=107     GT:GQ:DP        1/0:60:17       1/0:71:24       1/0:20:66
+4      115951810       rs59187191      T       G       .       PASS    AA=G;DP=99      GT:GQ:DP        1/0:60:23       1/0:100:18      1/0:100:54
+9      10492749        rs833448        G       C       .       PASS    AA=G;DP=102     GT:GQ:DP        1/0:60:26       1/0:84:20       1/0:100:57
+1      204903146       rs12044844      T       C       .       PASS    AA=C;DP=141;HM2 GT:GQ:DP        1/0:60:30       1/0:57:22       1/0:100:42
+19     39226122        rs60976840      G       C       .       PASS    AA=G;DP=149     GT:GQ:DP        1/0:60:31       1/0:28:25       1/0:100:93
+12     55962522        rs7133939       T       A       .       PASS    AA=T;DP=96      GT:GQ:DP        1/0:61:19       1/0:87:19       1/0:100:58
+21     29086296        rs2832092       T       C       .       PASS    AA=C;DP=136     GT:GQ:DP        1/0:61:24       1/0:100:27      1/0:100:83
+9      29510049        rs12554986      G       C       .       PASS    AA=g;DP=105     GT:GQ:DP        1/0:61:25       1/0:55:19       1/0:100:62
+12     76330817        rs4761378       T       C       .       PASS    AA=C;DP=103     GT:GQ:DP        1/0:61:25       1/0:84:18       1/0:100:46
+4      12854744        rs6847194       T       C       .       PASS    AA=C;DP=107     GT:GQ:DP        1/0:61:29       1/0:44:17       1/0:100:66
+13     109705857       .       G       A       .       PASS    AA=G;DP=86      GT:GQ:DP        1/0:62:17       1/0:36:6        1/0:100:65
+6      97690663        rs1206144       G       A       .       PASS    AA=A;DP=89      GT:GQ:DP        1/0:62:18       1/0:8:19        1/0:100:42
+9      82716956        rs7867945       G       A       .       PASS    AA=-;DP=63      GT:GQ:DP        1/0:62:19       1/0:5:10        1/0:100:30
+15     43670413        .       T       C       .       PASS    AA=T;DP=99      GT:GQ:DP        1/0:62:20       1/0:100:25      1/0:100:56
+17     45322841        rs380355        G       A       .       PASS    AA=A;DP=114     GT:GQ:DP        1/0:62:26       1/0:6:15        1/0:100:73
+15     45190874        .       T       A       .       PASS    AA=C;DP=149     GT:GQ:DP        1/0:62:48       1/0:43:32       1/0:100:70
+13     57796329        .       C       A       .       PASS    AA=C;DP=66      GT:GQ:DP        1/0:63:13       1/0:70:13       1/0:100:40
+8      27756892        rs11779934      T       C       .       PASS    AA=T;DP=76      GT:GQ:DP        1/0:63:14       1/0:64:14       1/0:100:45
+12     33130526        rs1392333       T       C       .       PASS    AA=C;DP=84      GT:GQ:DP        1/0:63:17       1/0:53:20       1/0:100:39
+10     70957423        rs1227953       T       C       .       PASS    AA=C;DP=99      GT:GQ:DP        1/0:63:21       1/0:97:16       1/0:100:62
+1      114450770       rs729300        T       C       .       PASS    AA=T;DP=118;HM2;HM3     GT:GQ:DP        1/0:63:24       1/0:67:22       1/0:100:76
+1      2522276 rs2985859       T       C       .       PASS    AA=C;DP=131;HM2 GT:GQ:DP        1/0:63:31       1/0:100:24      1/0:100:67
+4      60525597        rs349217        T       G       .       PASS    AA=G;DP=78      GT:GQ:DP        1/0:64:18       1/0:81:14       1/0:100:46
+8      10910454        .       G       C       .       PASS    AA=G;DP=80      GT:GQ:DP        1/0:64:20       1/0:62:14       1/0:100:37
+6      118969574       rs17080307      T       C       .       PASS    AA=T;DP=98      GT:GQ:DP        1/0:64:22       1/0:37:13       1/0:100:60
+12     98391881        rs955526        T       A       .       PASS    AA=A;DP=113     GT:GQ:DP        1/0:64:23       1/0:67:21       1/0:100:52
+11     113452281       rs12283291      G       A       .       PASS    AA=G;DP=88      GT:GQ:DP        1/0:65:14       1/0:76:21       1/0:100:53
+3      184234105       rs4859266       T       C       .       PASS    AA=T;DP=82      GT:GQ:DP        1/0:65:16       1/0:99:17       1/0:100:50
+10     122148009       rs12572388      T       C       .       PASS    AA=T;DP=121     GT:GQ:DP        1/0:65:20       1/0:100:31      1/0:100:70
+20     22508971        rs1203907       T       C       .       PASS    AA=C;DP=120     GT:GQ:DP        1/0:65:20       1/0:78:22       1/0:100:78
+6      8511703 rs6925765       C       A       .       PASS    AA=A;DP=59      GT:GQ:DP        1/0:65:21       1/0:43:10       1/0:100:18
+3      149739577       rs35274114      T       C       .       PASS    AA=T;DP=91      GT:GQ:DP        1/0:65:24       1/0:63:20       1/0:100:47
+4      100962536       rs3775500       T       G       .       PASS    AA=T;DP=138     GT:GQ:DP        1/0:65:25       1/0:100:28      1/0:100:79
+10     134562857       rs12766207      G       A       .       PASS    AA=G;DP=107     GT:GQ:DP        1/0:65:26       1/0:24:8        1/0:100:70
+10     59987093        rs1649058       G       A       .       PASS    AA=A;DP=77      GT:GQ:DP        1/0:66:11       1/0:61:13       1/0:100:53
+4      65481784        rs1348096       T       A       .       PASS    AA=T;DP=80      GT:GQ:DP        1/0:66:15       1/0:80:13       1/0:100:54
+16     74959687        rs12935373      T       C       .       PASS    AA=T;DP=102     GT:GQ:DP        1/0:66:16       1/0:100:30      1/0:100:54
+1      157607215       rs7548833       T       C       .       PASS    AA=T;DP=94;HM2  GT:GQ:DP        1/0:66:19       1/0:100:20      1/0:100:44
+17     28701273        rs439783        T       C       .       PASS    AA=t;DP=126     GT:GQ:DP        1/0:66:19       1/0:100:20      1/0:100:90
+7      154890180       rs2885338       G       A       .       PASS    AA=G;DP=77      GT:GQ:DP        1/0:66:20       1/0:61:13       1/0:100:36
+4      98495161        .       T       C       .       PASS    AA=T;DP=80      GT:GQ:DP        1/0:66:21       1/0:41:13       1/0:100:45
+18     577511  rs511784        T       G       .       PASS    AA=T;DP=110     GT:GQ:DP        1/0:66:29       1/0:78:32       1/0:100:49
+17     43929261        rs4794741       T       C       .       PASS    AA=C;DP=134     GT:GQ:DP        1/0:66:37       1/0:77:21       1/0:100:80
+4      136754670       rs1394550       G       A       .       PASS    AA=G;DP=91      GT:GQ:DP        1/0:67:13       1/0:100:17      1/0:100:57
+10     126263404       rs60812935      T       C       .       PASS    AA=C;DP=99      GT:GQ:DP        1/0:67:15       1/0:9:15        1/0:100:69
+13     68243167        rs4884804       T       G       .       PASS    AA=G;DP=83      GT:GQ:DP        1/0:67:17       1/0:96:12       1/0:100:48
+7      2273372 rs4721528       G       A       .       PASS    AA=G;DP=100     GT:GQ:DP        1/0:67:17       1/0:9:12        1/0:100:72
+9      10575469        .       G       A       .       PASS    AA=A;DP=82      GT:GQ:DP        1/0:67:20       1/0:78:17       1/0:100:45
+12     15175108        rs7310431       T       C       .       PASS    AA=C;DP=88      GT:GQ:DP        1/0:67:26       1/0:91:16       1/0:100:46
+11     95846039        rs11021605      T       C       .       PASS    AA=C;DP=122     GT:GQ:DP        1/0:67:36       1/0:99:21       1/0:100:65
+2      151676375       rs1485113       T       C       .       PASS    AA=T;DP=99      GT:GQ:DP        1/0:68:16       1/0:100:22      1/0:100:61
+12     131169532       rs7299476       T       C       .       PASS    AA=T;DP=99      GT:GQ:DP        1/0:68:23       1/0:22:8        1/0:100:67
+13     32490527        rs425686        G       C       .       PASS    AA=G;DP=100     GT:GQ:DP        1/0:68:25       1/0:91:21       1/0:100:44
+2      8788793 rs1044280       C       A       .       PASS    AA=C;DP=126     GT:GQ:DP        1/0:68:33       1/0:63:21       1/0:100:73
+7      100647356       rs1056678       T       C       .       PASS    AA=C;DP=68      GT:GQ:DP        1/0:69:17       1/0:35:8        1/0:100:37
+3      107368689       rs2895302       G       A       .       PASS    AA=A;DP=82      GT:GQ:DP        1/0:69:18       1/0:51:19       1/0:100:46
+7      67628488        rs28884525      G       A       .       PASS    AA=g;DP=106     GT:GQ:DP        1/0:69:22       1/0:88:21       1/0:100:62
+3      140530040       rs6770374       G       A       .       PASS    AA=G;DP=114     GT:GQ:DP        1/0:69:23       1/0:45:13       1/0:100:76
+20     4037177 rs6133086       G       A       .       PASS    AA=G;DP=93      GT:GQ:DP        1/0:69:25       1/0:47:11       1/0:100:57
+18     76039892        rs884779        G       A       .       PASS    AA=G;DP=105     GT:GQ:DP        1/0:69:29       1/0:45:12       1/0:100:63
+11     20979624        rs7120041       T       C       .       PASS    AA=C;DP=122     GT:GQ:DP        1/0:69:35       1/0:99:21       1/0:100:66
+20     60617777        .       T       C       .       PASS    AA=N;DP=90      GT:GQ:DP        1/0:6:27        1/0:25:7        1/0:8:56
+16     33851554        .       T       C       .       PASS    AA=.;DP=212     GT:GQ:DP        1/0:6:40        1/0:16:16       1/0:100:89
+12     88681110        rs10745515      T       C       .       PASS    AA=C;DP=81      GT:GQ:DP        1/0:70:16       1/0:71:12       1/0:100:52
+9      86215898        rs7042006       T       G       .       PASS    AA=N;DP=74      GT:GQ:DP        1/0:70:23       1/0:100:19      1/0:100:24
+12     126221617       rs1553700       G       A       .       PASS    AA=G;DP=118     GT:GQ:DP        1/0:70:28       1/0:67:13       1/0:100:76
+10     107925936       rs3780929       T       G       .       PASS    AA=G;DP=86      GT:GQ:DP        1/0:71:13       1/0:80:17       1/0:100:54
+11     117386811       rs2512149       T       C       .       PASS    AA=C;DP=106     GT:GQ:DP        1/0:71:17       1/0:27:19       1/0:100:71
+10     60488030        rs10491006      G       A       .       PASS    AA=G;DP=88      GT:GQ:DP        1/0:71:18       1/0:73:17       1/0:100:44
+3      62099866        rs9865754       G       A       .       PASS    AA=G;DP=101     GT:GQ:DP        1/0:71:18       1/0:87:17       1/0:100:68
+14     69404125        .       T       C       .       PASS    AA=T;DP=108     GT:GQ:DP        1/0:71:22       1/0:85:22       1/0:100:62
+5      14577552        rs60958090      T       C       .       PASS    AA=T;DP=117     GT:GQ:DP        1/0:71:24       1/0:73:17       1/0:100:80
+4      179260492       rs592506        G       A       .       PASS    AA=G;DP=74      GT:GQ:DP        1/0:71:28       1/0:21:11       1/0:100:29
+15     55940750        rs2414524       T       C       .       PASS    AA=t;DP=145     GT:GQ:DP        1/0:71:28       1/0:68:25       1/0:100:47
+5      57086116        rs12652479      C       A       .       PASS    AA=C;DP=84      GT:GQ:DP        1/0:72:15       1/0:96:21       1/0:100:49
+9      30682818        rs10122554      T       C       .       PASS    AA=T;DP=107     GT:GQ:DP        1/0:72:17       1/0:100:25      1/0:100:26
+2      170884384       .       G       A       .       PASS    AA=G;DP=67      GT:GQ:DP        1/0:72:18       1/0:100:18      1/0:100:31
+2      33891293        rs6737845       G       A       .       PASS    AA=A;DP=130     GT:GQ:DP        1/0:72:18       1/0:84:30       1/0:100:79
+9      135723278       rs6479627       T       C       .       PASS    AA=C;DP=108     GT:GQ:DP        1/0:72:19       1/0:13:14       1/0:100:76
+18     18590893        rs167248        T       C       .       PASS    AA=T;DP=75      GT:GQ:DP        1/0:72:22       1/0:17:14       1/0:100:28
+4      86489301        rs439128        G       A       .       PASS    AA=G;DP=107     GT:GQ:DP        1/0:72:26       1/0:94:23       1/0:100:59
+1      163418765       rs59534386      G       A       .       PASS    AA=G;DP=119     GT:GQ:DP        1/0:72:29       1/0:60:22       1/0:100:59
+6      32479932        .       G       A       .       PASS    AA=a;DP=119     GT:GQ:DP        1/0:72:38       1/0:89:26       1/0:100:55
+4      104075577       rs9307281       T       C       .       PASS    AA=T;DP=92      GT:GQ:DP        1/0:73:17       1/0:68:26       1/0:100:46
+18     35514196        rs474394        C       A       .       PASS    AA=C;DP=96      GT:GQ:DP        1/0:73:19       1/0:100:20      1/0:100:60
+3      163287907       .       T       C       .       PASS    AA=T;DP=78      GT:GQ:DP        1/0:73:20       1/0:63:17       1/0:100:40
+7      92162291        rs10225660      T       C       .       PASS    AA=C;DP=112     GT:GQ:DP        1/0:73:21       1/0:100:26      1/0:100:59
+6      25659861        rs118855        T       A       .       PASS    AA=T;DP=114     GT:GQ:DP        1/0:73:21       1/0:100:31      1/0:100:59
+10     128027826       rs7912998       G       A       .       PASS    AA=A;DP=134     GT:GQ:DP        1/0:73:22       1/0:100:20      1/0:100:72
+13     95918136        rs7337702       C       A       .       PASS    AA=C;DP=120     GT:GQ:DP        1/0:73:28       1/0:58:21       1/0:100:72
+4      55903843        .       T       C       .       PASS    AA=C;DP=93      GT:GQ:DP        1/0:74:15       1/0:99:16       1/0:100:61
+3      110708227       rs12485546      T       A       .       PASS    AA=T;DP=84      GT:GQ:DP        1/0:74:17       1/0:65:10       1/0:100:56
+11     98868874        rs7945925       G       A       .       PASS    AA=A;DP=117     GT:GQ:DP        1/0:74:18       1/0:65:20       1/0:100:78
+5      73323807        .       C       A       .       PASS    AA=C;DP=90      GT:GQ:DP        1/0:74:18       1/0:74:17       1/0:100:55
+7      327341  rs28613779      T       C       .       PASS    AA=N;DP=101     GT:GQ:DP        1/0:74:19       1/0:21:11       1/0:100:60
+4      140181366       .       G       A       .       PASS    AA=G;DP=105     GT:GQ:DP        1/0:74:21       1/0:100:27      1/0:100:54
+4      128312725       .       G       A       .       PASS    AA=G;DP=102     GT:GQ:DP        1/0:74:23       1/0:30:19       1/0:100:55
+1      224607674       rs1991865       G       A       .       PASS    AA=G;DP=109;HM2;HM3     GT:GQ:DP        1/0:74:23       1/0:57:17       1/0:100:70
+4      28583225        rs61672762      G       A       .       PASS    AA=g;DP=133     GT:GQ:DP        1/0:74:23       1/0:97:23       1/0:100:87
+4      187857841       rs6843324       T       G       .       PASS    AA=T;DP=99      GT:GQ:DP        1/0:74:25       1/0:32:24       1/0:100:41
+5      24350187        .       G       A       .       PASS    AA=g;DP=112     GT:GQ:DP        1/0:74:25       1/0:66:19       1/0:100:54
+1      217692140       rs6679784       G       A       .       PASS    AA=G;DP=82      GT:GQ:DP        1/0:74:26       1/0:31:16       1/0:100:41
+2      154215640       rs7562740       T       C       .       PASS    AA=C;DP=107     GT:GQ:DP        1/0:74:27       1/0:100:26      1/0:100:55
+9      89658805        rs7048599       C       A       .       PASS    AA=c;DP=102     GT:GQ:DP        1/0:74:27       1/0:78:21       1/0:100:55
+22     35272269        rs2049974       G       A       .       PASS    AA=A;DP=100     GT:GQ:DP        1/0:74:28       1/0:55:15       1/0:100:58
+1      207265605       rs59432606      G       A       .       PASS    AA=G;DP=115     GT:GQ:DP        1/0:74:29       1/0:25:25       1/0:100:60
+3      196190944       rs2720941       T       C       .       PASS    AA=C;DP=159     GT:GQ:DP        1/0:74:33       1/0:100:30      1/0:100:52
+4      14565705        rs12510635      T       C       .       PASS    AA=T;DP=79      GT:GQ:DP        1/0:75:12       1/0:50:12       1/0:100:51
+7      95051547        rs7802814       C       A       .       PASS    AA=C;DP=85      GT:GQ:DP        1/0:75:16       1/0:62:19       1/0:100:51
+11     130541611       .       T       C       .       PASS    AA=T;DP=93      GT:GQ:DP        1/0:75:19       1/0:44:14       1/0:100:60
+18     11741188        rs9967279       G       A       .       PASS    AA=G;DP=101     GT:GQ:DP        1/0:75:23       1/0:56:13       1/0:100:60
+6      85799038        rs9450121       T       C       .       PASS    AA=t;DP=91      GT:GQ:DP        1/0:75:26       1/0:9:13        1/0:100:52
+1      184027552       .       T       C       .       PASS    AA=T;DP=105     GT:GQ:DP        1/0:75:28       1/0:69:18       1/0:100:59
+12     1517598 rs10744543      T       G       .       PASS    AA=G;DP=112     GT:GQ:DP        1/0:75:33       1/0:93:22       1/0:100:48
+20     13573220        rs2423732       T       G       .       PASS    AA=G;DP=59      GT:GQ:DP        1/0:76:14       1/0:21:14       1/0:100:31
+9      8602914 .       T       C       .       PASS    AA=t;DP=104     GT:GQ:DP        1/0:76:16       1/0:87:21       1/0:100:71
+2      69706712        rs10204073      T       C       .       PASS    AA=C;DP=128     GT:GQ:DP        1/0:76:20       1/0:93:23       1/0:100:85
+21     19343367        rs2825324       T       G       .       PASS    AA=T;DP=85      GT:GQ:DP        1/0:76:21       1/0:87:16       1/0:100:48
+15     53286232        rs28591259      T       A       .       PASS    AA=A;DP=99      GT:GQ:DP        1/0:76:22       1/0:50:23       1/0:100:51
+8      91610405        rs7812970       G       A       .       PASS    AA=G;DP=131     GT:GQ:DP        1/0:76:23       1/0:84:11       1/0:100:97
+18     12471470        .       T       C       .       PASS    AA=T;DP=83      GT:GQ:DP        1/0:76:23       1/0:97:15       1/0:100:45
+8      5110734 rs1861750       G       A       .       PASS    AA=G;DP=123     GT:GQ:DP        1/0:76:26       1/0:95:26       1/0:100:71
+4      66091873        rs13143662      G       A       .       PASS    AA=A;DP=97      GT:GQ:DP        1/0:76:27       1/0:28:15       1/0:100:57
+14     85127390        rs58260178      G       A       .       PASS    AA=A;DP=115     GT:GQ:DP        1/0:76:29       1/0:100:25      1/0:100:49
+7      21968076        rs10223966      G       A       .       PASS    AA=G;DP=113     GT:GQ:DP        1/0:76:29       1/0:3:12        1/0:100:71
+16     10345473        rs8044450       G       C       .       PASS    AA=G;DP=103     GT:GQ:DP        1/0:76:30       1/0:40:11       1/0:100:62
+10     55624494        rs61860668      C       A       .       PASS    AA=c;DP=72      GT:GQ:DP        1/0:77:11       1/0:34:21       1/0:100:40
+13     54581635        rs7999502       G       A       .       PASS    AA=G;DP=104     GT:GQ:DP        1/0:77:14       1/0:70:25       1/0:100:65
+6      78051369        rs7772175       G       A       .       PASS    AA=G;DP=85      GT:GQ:DP        1/0:77:15       1/0:100:18      1/0:100:53
+4      19921989        .       G       A       .       PASS    AA=G;DP=98      GT:GQ:DP        1/0:77:16       1/0:100:20      1/0:100:60
+8      92352775        rs56246557      G       C       .       PASS    AA=G;DP=95      GT:GQ:DP        1/0:77:16       1/0:100:23      1/0:100:55
+11     26477131        rs11029585      T       C       .       PASS    AA=t;DP=91      GT:GQ:DP        1/0:77:16       1/0:58:21       1/0:100:52
+1      210577347       .       G       A       .       PASS    AA=G;DP=56      GT:GQ:DP        1/0:77:17       1/0:56:13       1/0:65:18
+14     68156815        rs17106039      G       A       .       PASS    AA=g;DP=101     GT:GQ:DP        1/0:77:22       1/0:53:14       1/0:100:64
+1      11350244        rs2744810       T       C       .       PASS    AA=T;DP=88;HM2  GT:GQ:DP        1/0:77:22       1/0:78:20       1/0:100:38
+20     55993345        rs6070327       T       C       .       PASS    AA=t;DP=100     GT:GQ:DP        1/0:77:23       1/0:54:22       1/0:100:55
+5      55431369        rs58798753      T       G       .       PASS    AA=T;DP=102     GT:GQ:DP        1/0:77:25       1/0:51:26       1/0:100:47
+5      179203358       rs12515005      C       A       .       PASS    AA=C;DP=105     GT:GQ:DP        1/0:77:26       1/0:56:21       1/0:100:56
+3      152199609       rs957231        G       A       .       PASS    AA=g;DP=97      GT:GQ:DP        1/0:77:27       1/0:100:26      1/0:100:35
+8      17626417        rs2979775       G       A       .       PASS    AA=A;DP=119     GT:GQ:DP        1/0:77:28       1/0:100:27      1/0:100:64
+9      27527271        rs7030008       T       C       .       PASS    AA=C;DP=144     GT:GQ:DP        1/0:77:29       1/0:90:29       1/0:100:69
+5      54438160        rs3091252       T       C       .       PASS    AA=T;DP=151     GT:GQ:DP        1/0:77:30       1/0:100:23      1/0:100:56
+1      228219698       rs11122595      G       C       .       PASS    AA=C;DP=110     GT:GQ:DP        1/0:77:31       1/0:9:15        1/0:100:63
+6      32650691        rs41293740      C       A       .       PASS    AA=-;DP=98      GT:GQ:DP        1/0:77:34       1/0:43:10       1/0:100:27
+11     42265644        rs34235341      G       A       .       PASS    AA=G;DP=86      GT:GQ:DP        1/0:78:10       1/0:45:15       1/0:100:58
+12     77167228        rs938030        T       A       .       PASS    AA=T;DP=68      GT:GQ:DP        1/0:78:13       1/0:78:15       1/0:100:28
+14     37717106        .       T       G       .       PASS    AA=G;DP=122     GT:GQ:DP        1/0:78:17       1/0:74:21       1/0:100:86
+9      71322019        rs11139063      G       A       .       PASS    AA=G;DP=109     GT:GQ:DP        1/0:78:22       1/0:75:23       1/0:100:65
+6      66984495        rs208490        G       A       .       PASS    AA=G;DP=109     GT:GQ:DP        1/0:78:22       1/0:98:21       1/0:100:69
+17     46020742        rs1548533       T       C       .       PASS    AA=T;DP=100     GT:GQ:DP        1/0:78:23       1/0:62:21       1/0:100:56
+10     129994385       rs2771230       G       C       .       PASS    AA=N;DP=74      GT:GQ:DP        1/0:78:23       1/0:70:11       1/0:96:36
+12     2987597 rs11062455      G       C       .       PASS    AA=G;DP=110     GT:GQ:DP        1/0:78:25       1/0:100:21      1/0:100:66
+5      109461790       rs1378509       T       C       .       PASS    AA=T;DP=144     GT:GQ:DP        1/0:78:25       1/0:100:36      1/0:100:88
+21     27849710        rs4817181       T       C       .       PASS    AA=T;DP=138     GT:GQ:DP        1/0:78:29       1/0:46:20       1/0:100:84
+22     26089199        rs5752527       T       C       .       PASS    AA=T;DP=80      GT:GQ:DP        1/0:79:13       1/0:50:16       1/0:100:51
+9      2728413 rs10812565      T       G       .       PASS    AA=G;DP=85      GT:GQ:DP        1/0:79:16       1/0:30:12       1/0:100:56
+9      29548217        rs10813123      T       C       .       PASS    AA=T;DP=79      GT:GQ:DP        1/0:79:16       1/0:67:17       1/0:100:46
+7      47998846        rs11773348      G       A       .       PASS    AA=A;DP=71      GT:GQ:DP        1/0:79:17       1/0:24:14       1/0:100:41
+2      66015624        rs7598654       T       C       .       PASS    AA=T;DP=108     GT:GQ:DP        1/0:79:18       1/0:100:25      1/0:100:66
+4      157370786       rs9998388       C       A       .       PASS    AA=A;DP=87      GT:GQ:DP        1/0:79:19       1/0:100:20      1/0:100:47
+4      24426869        rs800450        G       A       .       PASS    AA=A;DP=78      GT:GQ:DP        1/0:79:20       1/0:52:16       1/0:100:33
+4      132906379       rs12640224      G       A       .       PASS    AA=a;DP=114     GT:GQ:DP        1/0:79:21       1/0:100:23      1/0:100:70
+10     107890492       rs10748893      G       A       .       PASS    AA=A;DP=96      GT:GQ:DP        1/0:79:23       1/0:57:16       1/0:100:56
+8      8415512 rs13270194      T       C       .       PASS    AA=C;DP=98      GT:GQ:DP        1/0:79:28       1/0:44:13       1/0:100:57
+11     106913999       rs665905        T       C       .       PASS    AA=T;DP=64      GT:GQ:DP        1/0:7:8 1/0:78:21       1/0:100:36
+2      164212885       .       C       A       .       PASS    AA=C;DP=91      GT:GQ:DP        1/0:80:18       1/0:70:19       1/0:100:54
+2      135124111       rs12691869      T       C       .       PASS    AA=T;DP=98      GT:GQ:DP        1/0:80:22       1/0:94:17       1/0:100:61
+12     98560358        .       G       A       .       PASS    AA=G;DP=105     GT:GQ:DP        1/0:80:26       1/0:100:18      1/0:100:62
+8      89301913        rs1879201       G       A       .       PASS    AA=G;DP=129     GT:GQ:DP        1/0:80:28       1/0:100:20      1/0:100:81
+13     30825128        rs7991415       G       A       .       PASS    AA=G;DP=145     GT:GQ:DP        1/0:80:30       1/0:76:22       1/0:100:91
+3      45105162        rs6784502       T       C       .       PASS    AA=T;DP=150     GT:GQ:DP        1/0:80:35       1/0:100:22      1/0:100:91
+2      191754446       rs7584366       C       A       .       PASS    AA=C;DP=166     GT:GQ:DP        1/0:80:35       1/0:100:28      1/0:100:104
+7      62840563        .       G       A       .       PASS    AA=.;DP=146     GT:GQ:DP        1/0:80:35       1/0:100:34      1/0:100:77
+8      3645208 rs1383948       G       C       .       PASS    AA=C;DP=96      GT:GQ:DP        1/0:81:13       1/0:100:23      1/0:100:59
+2      19642146        rs11899126      G       A       .       PASS    AA=G;DP=121     GT:GQ:DP        1/0:81:19       1/0:100:31      1/0:100:47
+8      128182041       rs6987723       G       A       .       PASS    AA=G;DP=127     GT:GQ:DP        1/0:81:20       1/0:100:27      1/0:100:80
+3      61341147        rs9873719       G       C       .       PASS    AA=C;DP=100     GT:GQ:DP        1/0:81:20       1/0:34:12       1/0:100:61
+18     11869397        rs594853        G       A       .       PASS    AA=G;DP=86      GT:GQ:DP        1/0:81:25       1/0:27:14       1/0:100:37
+11     24804877        rs1486724       T       C       .       PASS    AA=T;DP=97      GT:GQ:DP        1/0:81:27       1/0:68:11       1/0:100:59
+8      131890351       rs263250        T       C       .       PASS    AA=T;DP=134     GT:GQ:DP        1/0:81:29       1/0:73:22       1/0:100:85
+2      120157803       rs10188890      T       C       .       PASS    AA=T;DP=129     GT:GQ:DP        1/0:81:33       1/0:65:20       1/0:100:75
+1      119809075       rs4439385       G       C       .       PASS    AA=G;DP=118;HM2 GT:GQ:DP        1/0:81:36       1/0:41:15       1/0:100:65
+7      12157666        rs10228540      G       C       .       PASS    AA=C;DP=76      GT:GQ:DP        1/0:82:13       1/0:90:22       1/0:100:31
+4      96635353        rs7654545       G       A       .       PASS    AA=G;DP=87      GT:GQ:DP        1/0:82:15       1/0:100:19      1/0:100:41
+1      239940605       rs12093835      G       A       .       PASS    AA=G;DP=100;HM2 GT:GQ:DP        1/0:82:17       1/0:100:17      1/0:100:66
+13     54521728        rs1925051       T       A       .       PASS    AA=A;DP=113     GT:GQ:DP        1/0:82:18       1/0:100:26      1/0:100:68
+11     1113261 rs12808824      G       A       .       PASS    AA=a;DP=85      GT:GQ:DP        1/0:82:19       1/0:11:12       1/0:100:55
+3      7361842 rs17698784      G       A       .       PASS    AA=A;DP=86      GT:GQ:DP        1/0:82:19       1/0:68:18       1/0:100:49
+13     82450613        rs2807435       T       A       .       PASS    AA=A;DP=102     GT:GQ:DP        1/0:82:20       1/0:93:17       1/0:100:65
+7      133715124       rs1646727       G       A       .       PASS    AA=g;DP=93      GT:GQ:DP        1/0:82:21       1/0:68:16       1/0:100:55
+16     77503925        rs7500900       G       A       .       PASS    AA=G;DP=115     GT:GQ:DP        1/0:82:23       1/0:26:16       1/0:100:75
+11     121847779       rs11218638      T       C       .       PASS    AA=T;DP=108     GT:GQ:DP        1/0:82:25       1/0:80:18       1/0:100:61
+6      97848478        rs9488434       T       A       .       PASS    AA=T;DP=114     GT:GQ:DP        1/0:82:26       1/0:100:27      1/0:100:58
+9      90135431        rs6560078       T       C       .       PASS    AA=T;DP=105     GT:GQ:DP        1/0:82:27       1/0:8:19        1/0:100:60
+3      77913944        .       T       G       .       PASS    AA=T;DP=137     GT:GQ:DP        1/0:82:29       1/0:62:31       1/0:75:53
+21     19067651        rs7281110       T       G       .       PASS    AA=G;DP=99      GT:GQ:DP        1/0:83:15       1/0:100:24      1/0:100:57
+10     10110304        rs7094769       G       C       .       PASS    AA=G;DP=93      GT:GQ:DP        1/0:83:16       1/0:64:14       1/0:100:63
+3      181975333       rs6789477       G       A       .       PASS    AA=G;DP=90      GT:GQ:DP        1/0:83:19       1/0:100:28      1/0:100:41
+2      147643709       rs365549        T       C       .       PASS    AA=T;DP=138     GT:GQ:DP        1/0:83:20       1/0:100:28      1/0:100:44
+2      70271543        .       T       G       .       PASS    AA=G;DP=93      GT:GQ:DP        1/0:83:26       1/0:57:13       1/0:93:45
+3      97889890        rs12631234      T       C       .       PASS    AA=t;DP=129     GT:GQ:DP        1/0:83:30       1/0:74:18       1/0:100:80
+8      30053983        rs60479216      T       C       .       PASS    AA=T;DP=93      GT:GQ:DP        1/0:84:18       1/0:26:23       1/0:100:53
+9      24975175        rs10966611      T       C       .       PASS    AA=T;DP=109     GT:GQ:DP        1/0:84:21       1/0:57:19       1/0:100:72
+7      154954206       rs4716599       T       C       .       PASS    AA=T;DP=111     GT:GQ:DP        1/0:84:24       1/0:54:17       1/0:100:71
+1      174556167       rs12096584      T       G       .       PASS    AA=G;DP=82;HM2  GT:GQ:DP        1/0:84:25       1/0:47:13       1/0:100:45
+9      90534475        rs4609263       C       A       .       PASS    AA=C;DP=133     GT:GQ:DP        1/0:84:28       1/0:100:26      1/0:100:78
+2      218367315       rs4674213       T       C       .       PASS    AA=C;DP=101     GT:GQ:DP        1/0:84:30       1/0:35:10       1/0:100:61
+1      194089319       rs4634886       T       C       .       PASS    AA=T;DP=105     GT:GQ:DP        1/0:85:17       1/0:100:26      1/0:100:62
+4      77806281        rs6834891       T       C       .       PASS    AA=N;DP=108     GT:GQ:DP        1/0:85:20       1/0:100:25      1/0:100:63
+10     2401799 rs12255666      G       C       .       PASS    AA=-;DP=85      GT:GQ:DP        1/0:85:26       1/0:58:11       1/0:100:48
+7      16931640        rs847408        T       C       .       PASS    AA=T;DP=144     GT:GQ:DP        1/0:85:27       1/0:92:23       1/0:100:44
+1      41017372        rs2769254       T       C       .       PASS    AA=C;DP=83      GT:GQ:DP        1/0:85:29       1/0:4:11        1/0:64:42
+18     48618869        rs13313672      T       C       .       PASS    AA=C;DP=103     GT:GQ:DP        1/0:85:35       1/0:43:14       1/0:100:61
+12     46684269        rs3803184       G       C       .       PASS    AA=G;DP=105     GT:GQ:DP        1/0:85:37       1/0:17:10       1/0:100:58
+3      42357796        rs56267682      G       A       .       PASS    AA=G;DP=139     GT:GQ:DP        1/0:85:47       1/0:99:27       1/0:100:70
+4      180312582       rs7656579       G       C       .       PASS    AA=C;DP=69      GT:GQ:DP        1/0:86:14       1/0:53:14       1/0:100:43
+4      136368570       rs6832906       G       A       .       PASS    AA=A;DP=87      GT:GQ:DP        1/0:86:14       1/0:65:16       1/0:100:55
+10     85081095        rs12262628      G       A       .       PASS    AA=A;DP=97      GT:GQ:DP        1/0:86:15       1/0:72:20       1/0:100:62
+1      74112363        rs12079619      T       G       .       PASS    AA=G;DP=81;HM2  GT:GQ:DP        1/0:86:18       1/0:85:17       1/0:100:39
+10     59489587        rs10826146      G       A       .       PASS    AA=G;DP=106     GT:GQ:DP        1/0:86:18       1/0:86:21       1/0:100:68
+4      20171178        rs7692811       G       A       .       PASS    AA=G;DP=96      GT:GQ:DP        1/0:86:20       1/0:71:20       1/0:100:56
+15     59000456        rs2062093       G       C       .       PASS    AA=g;DP=98      GT:GQ:DP        1/0:86:21       1/0:100:21      1/0:100:59
+9      86936191        .       C       A       .       PASS    AA=C;DP=94      GT:GQ:DP        1/0:86:25       1/0:71:19       1/0:100:51
+1      92240027        rs2303968       T       C       .       PASS    AA=C;DP=114;HM2;HM3     GT:GQ:DP        1/0:86:26       1/0:100:30      1/0:100:58
+15     80207749        rs8042263       G       C       .       PASS    AA=G;DP=120     GT:GQ:DP        1/0:86:27       1/0:77:19       1/0:100:72
+7      153542062       rs62484080      G       A       .       PASS    AA=G;DP=158     GT:GQ:DP        1/0:86:29       1/0:100:28      1/0:100:58
+3      178848432       rs6780409       G       A       .       PASS    AA=G;DP=110     GT:GQ:DP        1/0:86:30       1/0:100:23      1/0:100:58
+17     41073586        rs439558        T       C       .       PASS    AA=C;DP=97      GT:GQ:DP        1/0:86:35       1/0:24:14       1/0:100:49
+3      145991353       .       T       C       .       PASS    AA=C;DP=133     GT:GQ:DP        1/0:86:36       1/0:12:20       1/0:100:75
+19     16432129        .       T       C       .       PASS    AA=T;DP=90      GT:GQ:DP        1/0:87:14       1/0:37:15       1/0:100:62
+13     82395659        rs2876787       T       C       .       PASS    AA=C;DP=109     GT:GQ:DP        1/0:87:17       1/0:100:22      1/0:100:69
+18     14728810        rs9961438       T       C       .       PASS    AA=.;DP=99      GT:GQ:DP        1/0:87:17       1/0:60:23       1/0:100:47
+21     23397239        rs2827858       T       C       .       PASS    AA=T;DP=92      GT:GQ:DP        1/0:87:18       1/0:100:20      1/0:100:54
+3      114133473       rs7611690       G       A       .       PASS    AA=G;DP=123     GT:GQ:DP        1/0:87:20       1/0:64:14       1/0:100:85
+4      96772583        rs7674945       T       C       .       PASS    AA=T;DP=112     GT:GQ:DP        1/0:87:22       1/0:100:19      1/0:100:71
+9      106568926       rs35350211      T       C       .       PASS    AA=T;DP=81      GT:GQ:DP        1/0:87:25       1/0:91:19       1/0:100:38
+8      5892891 rs2204807       G       C       .       PASS    AA=G;DP=122     GT:GQ:DP        1/0:87:27       1/0:58:24       1/0:100:71
+9      137447589       rs2989740       G       A       .       PASS    AA=A;DP=124     GT:GQ:DP        1/0:87:30       1/0:50:15       1/0:100:80
+18     54735687        rs17834601      T       G       .       PASS    AA=T;DP=120     GT:GQ:DP        1/0:87:38       1/0:15:16       1/0:100:66
+13     62258161        rs7988968       T       G       .       PASS    AA=G;DP=60      GT:GQ:DP        1/0:88:11       1/0:94:16       1/0:100:27
+4      16488918        rs11934934      T       C       .       PASS    AA=T;DP=111     GT:GQ:DP        1/0:88:13       1/0:90:25       1/0:100:75
+8      13853326        rs35517416      T       G       .       PASS    AA=G;DP=78      GT:GQ:DP        1/0:88:16       1/0:92:19       1/0:100:42
+4      148553738       .       T       C       .       PASS    AA=T;DP=79      GT:GQ:DP        1/0:88:17       1/0:100:18      1/0:95:41
+13     75547333        rs1590903       T       C       .       PASS    AA=T;DP=116     GT:GQ:DP        1/0:88:18       1/0:92:31       1/0:100:63
+4      179556245       rs2203009       T       C       .       PASS    AA=T;DP=81      GT:GQ:DP        1/0:88:19       1/0:45:12       1/0:100:43
+15     37241778        rs4290448       T       C       .       PASS    AA=T;DP=84      GT:GQ:DP        1/0:88:21       1/0:100:18      1/0:100:42
+13     30014522        .       T       C       .       PASS    AA=t;DP=83      GT:GQ:DP        1/0:88:21       1/0:47:10       1/0:100:40
+2      205411138       rs13393061      T       G       .       PASS    AA=T;DP=110     GT:GQ:DP        1/0:88:21       1/0:67:21       1/0:100:69
+8      125827314       .       G       A       .       PASS    AA=g;DP=71      GT:GQ:DP        1/0:88:22       1/0:65:12       1/0:100:28
+1      48385511        rs214229        G       A       .       PASS    AA=A;DP=84      GT:GQ:DP        1/0:88:22       1/0:76:15       1/0:100:49
+6      123997666       rs11757453      G       A       .       PASS    AA=G;DP=105     GT:GQ:DP        1/0:88:22       1/0:78:16       1/0:100:67
+11     96774291        rs347780        G       A       .       PASS    AA=g;DP=107     GT:GQ:DP        1/0:88:24       1/0:84:22       1/0:100:62
+11     98826953        rs2656172       T       C       .       PASS    AA=C;DP=95      GT:GQ:DP        1/0:88:24       1/0:87:19       1/0:100:51
+2      14626211        rs4668835       G       A       .       PASS    AA=A;DP=108     GT:GQ:DP        1/0:88:25       1/0:100:20      1/0:100:61
+4      74657852        rs9997572       T       C       .       PASS    AA=C;DP=86      GT:GQ:DP        1/0:88:30       1/0:23:15       1/0:100:36
+11     16975453        rs10832713      T       C       .       PASS    AA=C;DP=168     GT:GQ:DP        1/0:88:42       1/0:81:21       1/0:100:54
+12     84970619        rs7969802       T       A       .       PASS    AA=T;DP=75      GT:GQ:DP        1/0:89:12       1/0:87:21       1/0:100:41
+5      2129833 rs13184440      T       G       .       PASS    AA=T;DP=93      GT:GQ:DP        1/0:89:17       1/0:96:22       1/0:100:52
+12     114253234       .       T       G       .       PASS    AA=t;DP=96      GT:GQ:DP        1/0:89:21       1/0:100:30      1/0:100:38
+9      12602897        rs1359444       G       A       .       PASS    AA=G;DP=124     GT:GQ:DP        1/0:89:21       1/0:100:33      1/0:100:71
+4      19035078        rs10002056      G       A       .       PASS    AA=A;DP=90      GT:GQ:DP        1/0:89:21       1/0:68:19       1/0:100:48
+17     22727931        rs322195        T       A       .       PASS    AA=A;DP=107     GT:GQ:DP        1/0:89:21       1/0:94:22       1/0:100:62
+6      145730952       rs6902581       T       C       .       PASS    AA=C;DP=104     GT:GQ:DP        1/0:89:21       1/0:98:22       1/0:100:61
+3      174295323       rs60693983      G       A       .       PASS    AA=A;DP=100     GT:GQ:DP        1/0:89:22       1/0:100:27      1/0:100:40
+20     10905445        rs6104683       G       A       .       PASS    AA=G;DP=126     GT:GQ:DP        1/0:89:22       1/0:58:19       1/0:100:39
+8      34976953        rs16883314      G       A       .       PASS    AA=G;DP=95      GT:GQ:DP        1/0:89:23       1/0:24:18       1/0:100:56
+10     83811215        rs7091584       T       C       .       PASS    AA=C;DP=117     GT:GQ:DP        1/0:89:24       1/0:100:28      1/0:100:64
+22     48544204        rs138801        G       A       .       PASS    AA=N;DP=105     GT:GQ:DP        1/0:89:25       1/0:65:12       1/0:100:69
+6      56110090        rs1011277       G       A       .       PASS    AA=C;DP=101     GT:GQ:DP        1/0:89:25       1/0:88:17       1/0:100:61
+16     33375471        .       G       C       .       PASS    AA=g;DP=184     GT:GQ:DP        1/0:89:27       1/0:23:28       1/0:100:66
+6      51855482        rs9395738       T       C       .       PASS    AA=T;DP=111     GT:GQ:DP        1/0:89:29       1/0:20:24       1/0:100:59
+20     2633259 rs6076421       G       A       .       PASS    AA=A;DP=135     GT:GQ:DP        1/0:89:38       1/0:18:19       1/0:100:79
+15     58017827        rs10152117      T       C       .       PASS    AA=T;DP=74      GT:GQ:DP        1/0:90:14       1/0:96:21       1/0:100:40
+4      60612927        rs562741        G       A       .       PASS    AA=G;DP=96      GT:GQ:DP        1/0:90:19       1/0:100:23      1/0:100:55
+12     15914029        .       T       G       .       PASS    AA=G;DP=115     GT:GQ:DP        1/0:90:19       1/0:72:29       1/0:100:67
+2      176763015       rs6710142       G       A       .       PASS    AA=G;DP=104     GT:GQ:DP        1/0:90:19       1/0:82:18       1/0:100:67
+4      130199243       rs2118045       C       A       .       PASS    AA=A;DP=100     GT:GQ:DP        1/0:90:21       1/0:73:20       1/0:100:57
+9      15841909        rs34742654      G       A       .       PASS    AA=G;DP=115     GT:GQ:DP        1/0:90:22       1/0:100:30      1/0:100:59
+3      184301189       rs60279676      C       A       .       PASS    AA=C;DP=112     GT:GQ:DP        1/0:90:22       1/0:75:22       1/0:100:69
+14     37914435        rs1168542       T       G       .       PASS    AA=T;DP=114     GT:GQ:DP        1/0:90:22       1/0:92:21       1/0:100:71
+5      166734638       .       G       A       .       PASS    AA=G;DP=144     GT:GQ:DP        1/0:90:25       1/0:100:30      1/0:100:91
+13     31272788        rs7332460       G       A       .       PASS    AA=G;DP=115     GT:GQ:DP        1/0:90:25       1/0:97:18       1/0:100:71
+16     56222743        .       G       A       .       PASS    AA=g;DP=96      GT:GQ:DP        1/0:90:28       1/0:37:14       1/0:100:54
+6      13330856        rs4711939       T       C       .       PASS    AA=T;DP=135     GT:GQ:DP        1/0:90:29       1/0:100:22      1/0:100:85
+3      196972788       rs2641717       T       C       .       PASS    AA=t;DP=127     GT:GQ:DP        1/0:90:29       1/0:62:17       1/0:100:83
+10     93339595        rs4933671       T       G       .       PASS    AA=G;DP=100     GT:GQ:DP        1/0:90:30       1/0:88:20       1/0:100:49
+20     837904  rs56256143      C       A       .       PASS    AA=A;DP=140     GT:GQ:DP        1/0:90:31       1/0:51:22       1/0:100:84
+20     42055276        rs6130494       G       A       .       PASS    AA=A;DP=141     GT:GQ:DP        1/0:90:31       1/0:80:23       1/0:100:88
+6      97160939        .       T       G       .       PASS    AA=T;DP=131     GT:GQ:DP        1/0:90:32       1/0:100:25      1/0:100:75
+8      112342225       .       T       C       .       PASS    AA=T;DP=135     GT:GQ:DP        1/0:90:34       1/0:40:28       1/0:100:70
+18     41293129        rs2542990       T       C       .       PASS    AA=C;DP=113     GT:GQ:DP        1/0:90:34       1/0:97:22       1/0:100:46
+9      21801565        .       G       A       .       PASS    AA=G;DP=147     GT:GQ:DP        1/0:90:36       1/0:100:32      1/0:100:78
+5      31935380        rs7713597       T       G       .       PASS    AA=G;DP=140     GT:GQ:DP        1/0:90:37       1/0:100:20      1/0:100:39
+5      112978076       rs9326897       T       C       .       PASS    AA=C;DP=146     GT:GQ:DP        1/0:90:47       1/0:32:26       1/0:100:75
+4      167644811       rs6829635       T       A       .       PASS    AA=A;DP=97      GT:GQ:DP        1/0:91:15       1/0:68:19       1/0:100:65
+8      79100124        rs4397393       G       C       .       PASS    AA=G;DP=97      GT:GQ:DP        1/0:91:18       1/0:100:29      1/0:100:52
+11     112171267       rs178620        G       A       .       PASS    AA=G;DP=116     GT:GQ:DP        1/0:91:19       1/0:100:18      1/0:100:78
+5      152483041       rs62398815      G       A       .       PASS    AA=G;DP=107     GT:GQ:DP        1/0:91:19       1/0:100:20      1/0:100:66
+7      52243499        rs10242438      T       C       .       PASS    AA=t;DP=85      GT:GQ:DP        1/0:91:20       1/0:62:13       1/0:100:53
+7      90450174        rs802398        G       A       .       PASS    AA=A;DP=90      GT:GQ:DP        1/0:91:22       1/0:17:17       1/0:100:51
+16     76359408        rs8053865       T       C       .       PASS    AA=C;DP=120     GT:GQ:DP        1/0:91:23       1/0:93:28       1/0:100:69
+11     2239593 rs6578256       T       G       .       PASS    AA=T;DP=97      GT:GQ:DP        1/0:91:24       1/0:30:10       1/0:100:65
+6      125740012       rs6569421       G       A       .       PASS    AA=G;DP=107     GT:GQ:DP        1/0:91:26       1/0:77:21       1/0:100:64
+22     47291850        rs4823798       G       A       .       PASS    AA=G;DP=115     GT:GQ:DP        1/0:91:27       1/0:70:18       1/0:100:67
+12     79907634        rs7961694       T       C       .       PASS    AA=C;DP=157     GT:GQ:DP        1/0:91:28       1/0:100:26      1/0:100:69
+13     52779666        rs4555040       G       A       .       PASS    AA=A;DP=140     GT:GQ:DP        1/0:91:30       1/0:100:30      1/0:100:81
+20     52166768        .       T       C       .       PASS    AA=C;DP=110     GT:GQ:DP        1/0:91:31       1/0:38:12       1/0:100:67
+16     58276258        rs1392490       G       A       .       PASS    AA=A;DP=100     GT:GQ:DP        1/0:92:13       1/0:87:23       1/0:100:64
+13     113476579       .       T       C       .       PASS    AA=t;DP=105     GT:GQ:DP        1/0:92:20       1/0:59:20       1/0:100:67
+9      78607658        rs4745584       G       C       .       PASS    AA=C;DP=110     GT:GQ:DP        1/0:92:23       1/0:100:19      1/0:100:69
+5      165338348       rs7733351       T       C       .       PASS    AA=T;DP=108     GT:GQ:DP        1/0:92:24       1/0:100:20      1/0:100:64
+17     1324919 rs9903846       G       A       .       PASS    AA=G;DP=101     GT:GQ:DP        1/0:92:24       1/0:27:7        1/0:100:68
+1      89588736        .       G       C       .       PASS    AA=g;DP=125     GT:GQ:DP        1/0:92:25       1/0:100:30      1/0:100:74
+14     84549509        rs10140942      G       A       .       PASS    AA=A;DP=131     GT:GQ:DP        1/0:92:28       1/0:100:27      1/0:100:72
+15     92528715        rs8028010       G       A       .       PASS    AA=G;DP=130     GT:GQ:DP        1/0:92:28       1/0:100:30      1/0:100:75
+7      22681632        rs6461658       T       C       .       PASS    AA=C;DP=109     GT:GQ:DP        1/0:92:31       1/0:83:21       1/0:100:56
+14     26531550        rs12431881      C       A       .       PASS    AA=A;DP=119     GT:GQ:DP        1/0:92:33       1/0:100:26      1/0:100:59
+1      29042592        rs618886        T       C       .       PASS    AA=C;DP=146;HM3 GT:GQ:DP        1/0:92:39       1/0:100:25      1/0:100:84
+8      11048158        rs2409716       T       C       .       PASS    AA=T;DP=119     GT:GQ:DP        1/0:93:16       1/0:83:24       1/0:100:80
+12     103805784       rs4076550       T       C       .       PASS    AA=T;DP=84      GT:GQ:DP        1/0:93:20       1/0:100:25      1/0:100:39
+4      68514727        rs1866324       G       A       .       PASS    AA=A;DP=77      GT:GQ:DP        1/0:93:20       1/0:92:14       1/0:100:33
+1      49725355        rs1167303       G       A       .       PASS    AA=G;DP=107     GT:GQ:DP        1/0:93:22       1/0:100:29      1/0:100:56
+5      102080902       rs2671581       T       C       .       PASS    AA=T;DP=137     GT:GQ:DP        1/0:93:24       1/0:97:18       1/0:100:71
+2      160102509       rs10189679      C       A       .       PASS    AA=C;DP=116     GT:GQ:DP        1/0:93:25       1/0:45:24       1/0:100:65
+20     56620809        rs6026405       T       C       .       PASS    AA=T;DP=75      GT:GQ:DP        1/0:93:25       1/0:72:16       1/0:100:31
+2      135194109       rs7565713       G       A       .       PASS    AA=N;DP=114     GT:GQ:DP        1/0:93:26       1/0:64:13       1/0:100:77
+7      148695434       rs1723668       G       A       .       PASS    AA=G;DP=123     GT:GQ:DP        1/0:93:27       1/0:78:21       1/0:100:77
+3      117713405       rs6807086       G       A       .       PASS    AA=G;DP=140     GT:GQ:DP        1/0:93:28       1/0:100:35      1/0:100:76
+1      92087279        rs1017956       T       A       .       PASS    AA=A;DP=110;HM2;HM3     GT:GQ:DP        1/0:93:28       1/0:4:22        1/0:100:60
+10     133995143       rs7100410       G       A       .       PASS    AA=G;DP=101     GT:GQ:DP        1/0:93:31       1/0:6:11        1/0:100:59
+9      125359112       rs10818836      G       A       .       PASS    AA=G;DP=146     GT:GQ:DP        1/0:93:40       1/0:64:14       1/0:100:95
+1      89510820        rs2147309       G       C       .       PASS    AA=G;DP=149     GT:GQ:DP        1/0:93:41       1/0:11:26       1/0:100:80
+2      15081094        rs12692541      G       A       .       PASS    AA=A;DP=93      GT:GQ:DP        1/0:94:15       1/0:100:28      1/0:100:50
+8      143056628       rs57066332      G       A       .       PASS    AA=g;DP=92      GT:GQ:DP        1/0:94:20       1/0:47:14       1/0:100:52
+6      100961656       rs13191359      T       C       .       PASS    AA=T;DP=84      GT:GQ:DP        1/0:94:21       1/0:74:22       1/0:100:43
+1      241524651       rs55898123      G       A       .       PASS    AA=G;DP=93      GT:GQ:DP        1/0:94:23       1/0:89:16       1/0:100:55
+14     39675469        rs4625645       G       A       .       PASS    AA=g;DP=99      GT:GQ:DP        1/0:94:24       1/0:85:18       1/0:100:57
+2      140568891       rs2030956       G       C       .       PASS    AA=C;DP=119     GT:GQ:DP        1/0:94:25       1/0:89:24       1/0:100:73
+5      7799667 rs6555490       G       A       .       PASS    AA=g;DP=125     GT:GQ:DP        1/0:94:26       1/0:100:29      1/0:100:69
+8      73647361        rs12056748      G       A       .       PASS    AA=g;DP=131     GT:GQ:DP        1/0:94:27       1/0:75:23       1/0:100:81
+8      143903890       rs2572891       T       C       .       PASS    AA=t;DP=124     GT:GQ:DP        1/0:94:28       1/0:62:22       1/0:100:73
+2      214197711       rs1515913       G       A       .       PASS    AA=A;DP=130     GT:GQ:DP        1/0:94:28       1/0:97:33       1/0:100:70
+3      7884277 rs411165        G       A       .       PASS    AA=G;DP=136     GT:GQ:DP        1/0:94:29       1/0:100:31      1/0:100:79
+19     61307910        .       G       A       .       PASS    AA=G;DP=134     GT:GQ:DP        1/0:94:30       1/0:35:16       1/0:100:89
+10     106151919       rs10786791      C       A       .       PASS    AA=A;DP=104     GT:GQ:DP        1/0:94:33       1/0:54:18       1/0:100:52
+4      5797521 rs1351357       T       C       .       PASS    AA=T;DP=133     GT:GQ:DP        1/0:94:35       1/0:96:17       1/0:100:80
+1      184120828       rs6667046       C       A       .       PASS    AA=C;DP=80;HM2  GT:GQ:DP        1/0:95:14       1/0:44:20       1/0:100:47
+5      15676646        rs12187518      G       A       .       PASS    AA=g;DP=93      GT:GQ:DP        1/0:95:17       1/0:93:21       1/0:100:50
+1      105846289       .       C       A       .       PASS    AA=N;DP=65      GT:GQ:DP        1/0:95:18       1/0:83:13       1/0:100:27
+1      206918142       rs59375904      T       G       .       PASS    AA=G;DP=116     GT:GQ:DP        1/0:95:19       1/0:100:26      1/0:100:74
+19     24023624        rs62113757      G       A       .       PASS    AA=G;DP=100     GT:GQ:DP        1/0:95:19       1/0:39:12       1/0:100:70
+17     3740042 rs12449921      G       C       .       PASS    AA=G;DP=108     GT:GQ:DP        1/0:95:20       1/0:91:18       1/0:100:59
+11     45328757        .       G       C       .       PASS    AA=G;DP=92      GT:GQ:DP        1/0:95:22       1/0:100:24      1/0:100:46
+6      144418912       rs4896693       T       A       .       PASS    AA=A;DP=115     GT:GQ:DP        1/0:95:22       1/0:78:18       1/0:100:77
+16     50871897        rs1477013       T       A       .       PASS    AA=T;DP=109     GT:GQ:DP        1/0:95:24       1/0:100:26      1/0:100:61
+17     22846791        rs9332455       G       C       .       PASS    AA=G;DP=154     GT:GQ:DP        1/0:95:27       1/0:100:25      1/0:100:61
+2      227684357       rs4476340       G       A       .       PASS    AA=A;DP=120     GT:GQ:DP        1/0:95:27       1/0:79:17       1/0:100:76
+18     27301797        rs6506926       T       A       .       PASS    AA=t;DP=135     GT:GQ:DP        1/0:95:27       1/0:93:21       1/0:100:89
+4      181135953       .       G       A       .       PASS    AA=g;DP=116     GT:GQ:DP        1/0:95:30       1/0:100:22      1/0:100:65
+3      3393318 .       G       A       .       PASS    AA=A;DP=111     GT:GQ:DP        1/0:95:31       1/0:12:16       1/0:100:65
+18     73003067        .       G       C       .       PASS    AA=G;DP=138     GT:GQ:DP        1/0:95:36       1/0:91:18       1/0:100:84
+16     77096204        rs1397925       G       A       .       PASS    AA=G;DP=108     GT:GQ:DP        1/0:95:37       1/0:82:22       1/0:100:37
+7      68158520        rs2869743       C       A       .       PASS    AA=A;DP=81      GT:GQ:DP        1/0:96:12       1/0:73:21       1/0:100:47
+4      96004988        rs6829384       T       C       .       PASS    AA=C;DP=91      GT:GQ:DP        1/0:96:16       1/0:58:17       1/0:100:58
+7      122327545       rs2428771       G       C       .       PASS    AA=G;DP=91      GT:GQ:DP        1/0:96:19       1/0:79:18       1/0:100:55
+1      89879285        rs2185195       T       C       .       PASS    AA=C;DP=92      GT:GQ:DP        1/0:96:20       1/0:41:18       1/0:100:55
+12     53913737        rs2371145       G       A       .       PASS    AA=A;DP=99      GT:GQ:DP        1/0:96:20       1/0:82:20       1/0:100:60
+3      141329492       rs2350279       T       C       .       PASS    AA=T;DP=90      GT:GQ:DP        1/0:96:20       1/0:91:22       1/0:100:49
+2      60630720        .       G       A       .       PASS    AA=G;DP=78      GT:GQ:DP        1/0:96:21       1/0:21:10       1/0:100:46
+1      24967301        rs6692599       T       C       .       PASS    AA=T;DP=121;HM2 GT:GQ:DP        1/0:96:22       1/0:74:18       1/0:100:82
+8      75837413        rs11996191      G       A       .       PASS    AA=A;DP=97      GT:GQ:DP        1/0:96:23       1/0:17:13       1/0:100:62
+10     108486437       rs17121352      G       A       .       PASS    AA=G;DP=96      GT:GQ:DP        1/0:96:25       1/0:69:19       1/0:100:51
+8      34733281        rs11988462      T       C       .       PASS    AA=C;DP=118     GT:GQ:DP        1/0:96:26       1/0:100:23      1/0:100:68
+11     61146178        rs169167        C       A       .       PASS    AA=c;DP=118     GT:GQ:DP        1/0:96:27       1/0:100:21      1/0:100:70
+1      29408911        rs2503018       G       C       .       PASS    AA=G;DP=79      GT:GQ:DP        1/0:96:27       1/0:3:9 1/0:100:31
+8      3205265 rs11774749      G       A       .       PASS    AA=A;DP=120     GT:GQ:DP        1/0:96:28       1/0:100:21      1/0:100:73
+3      80594136        rs17017962      T       C       .       PASS    AA=T;DP=131     GT:GQ:DP        1/0:96:28       1/0:100:29      1/0:100:71
+5      65587167        rs10805410      T       G       .       PASS    AA=T;DP=132     GT:GQ:DP        1/0:96:28       1/0:81:21       1/0:100:83
+3      64366493        rs719775        T       A       .       PASS    AA=A;DP=124     GT:GQ:DP        1/0:96:28       1/0:89:27       1/0:100:70
+2      225833099       rs11891761      T       C       .       PASS    AA=C;DP=114     GT:GQ:DP        1/0:96:30       1/0:55:28       1/0:100:54
+22     25453944        rs5761710       T       C       .       PASS    AA=C;DP=152     GT:GQ:DP        1/0:96:33       1/0:100:34      1/0:100:86
+6      30054163        .       T       C       .       PASS    AA=.;DP=136     GT:GQ:DP        1/0:96:33       1/0:55:30       1/0:100:73
+19     2501038 rs8112408       T       G       .       PASS    AA=G;DP=120     GT:GQ:DP        1/0:96:35       1/0:89:16       1/0:100:68
+3      177606890       rs301184        G       A       .       PASS    AA=G;DP=83      GT:GQ:DP        1/0:97:15       1/0:55:17       1/0:100:50
+11     15373266        rs12278251      T       G       .       PASS    AA=T;DP=86      GT:GQ:DP        1/0:97:18       1/0:27:14       1/0:100:51
+15     35827539        rs57331003      C       A       .       PASS    AA=A;DP=92      GT:GQ:DP        1/0:97:20       1/0:100:22      1/0:100:48
+7      108180568       rs57398251      G       A       .       PASS    AA=A;DP=88      GT:GQ:DP        1/0:97:20       1/0:29:23       1/0:100:45
+8      40783470        rs12675440      T       C       .       PASS    AA=T;DP=106     GT:GQ:DP        1/0:97:21       1/0:61:21       1/0:100:65
+4      32560006        rs10008703      G       A       .       PASS    AA=G;DP=117     GT:GQ:DP        1/0:97:22       1/0:100:22      1/0:100:74
+3      25286024        rs1865750       G       A       .       PASS    AA=A;DP=124     GT:GQ:DP        1/0:97:22       1/0:100:24      1/0:100:79
+4      130134513       rs280603        C       A       .       PASS    AA=A;DP=89      GT:GQ:DP        1/0:97:22       1/0:45:17       1/0:100:37
+6      122727927       rs2316671       G       C       .       PASS    AA=C;DP=118     GT:GQ:DP        1/0:97:24       1/0:69:23       1/0:100:71
+6      155429218       rs6900877       T       C       .       PASS    AA=T;DP=107     GT:GQ:DP        1/0:97:26       1/0:18:12       1/0:100:51
+19     17768444        rs2240811       T       C       .       PASS    AA=C;DP=103     GT:GQ:DP        1/0:97:26       1/0:47:13       1/0:100:54
+4      73791285        rs10018826      T       G       .       PASS    AA=T;DP=119     GT:GQ:DP        1/0:97:26       1/0:86:26       1/0:100:65
+13     62513633        .       T       C       .       PASS    AA=T;DP=153     GT:GQ:DP        1/0:97:27       1/0:74:35       1/0:97:94
+4      99983462        .       G       A       .       PASS    AA=G;DP=117     GT:GQ:DP        1/0:97:33       1/0:67:20       1/0:100:66
+7      28025498        rs10273628      G       C       .       PASS    AA=G;DP=150     GT:GQ:DP        1/0:97:34       1/0:14:18       1/0:100:98
+7      145283447       rs11978366      G       A       .       PASS    AA=A;DP=97      GT:GQ:DP        1/0:98:20       1/0:100:26      1/0:100:55
+5      91311069        rs421379        T       C       .       PASS    AA=T;DP=73      GT:GQ:DP        1/0:98:20       1/0:62:17       1/0:100:35
+6      29911865        rs2735019       C       A       .       PASS    AA=.;DP=111     GT:GQ:DP        1/0:98:22       1/0:100:20      1/0:100:60
+11     88178483        rs10831464      T       C       .       PASS    AA=T;DP=94      GT:GQ:DP        1/0:98:22       1/0:76:14       1/0:100:58
+2      226452127       rs16866721      T       C       .       PASS    AA=C;DP=138     GT:GQ:DP        1/0:98:24       1/0:54:23       1/0:100:80
+2      199409996       rs1852261       T       C       .       PASS    AA=T;DP=93      GT:GQ:DP        1/0:98:24       1/0:56:22       1/0:100:45
+4      48018490        rs309879        G       C       .       PASS    AA=C;DP=143     GT:GQ:DP        1/0:98:27       1/0:100:31      1/0:100:45
+4      88996571        rs7680187       T       C       .       PASS    AA=T;DP=105     GT:GQ:DP        1/0:98:28       1/0:35:15       1/0:100:62
+14     106159288       rs58098810      G       A       .       PASS    AA=g;DP=106     GT:GQ:DP        1/0:98:30       1/0:57:18       1/0:100:59
+9      119519158       rs11536891      T       C       .       PASS    AA=T;DP=124     GT:GQ:DP        1/0:98:31       1/0:81:27       1/0:100:55
+6      32744342        rs9274657       G       A       .       PASS    AA=g;DP=121     GT:GQ:DP        1/0:98:32       1/0:98:26       1/0:100:63
+12     40764268        .       T       G       .       PASS    AA=T;DP=174     GT:GQ:DP        1/0:98:37       1/0:100:29      1/0:100:49
+2      101909911       rs12990046      G       A       .       PASS    AA=A;DP=148     GT:GQ:DP        1/0:98:40       1/0:38:28       1/0:100:81
+14     65540656        rs1147439       G       A       .       PASS    AA=A;DP=131     GT:GQ:DP        1/0:99:20       1/0:88:30       1/0:100:81
+7      42268399        rs13438667      T       C       .       PASS    AA=T;DP=99      GT:GQ:DP        1/0:99:20       1/0:95:17       1/0:100:50
+7      12989500        rs10233654      G       C       .       PASS    AA=C;DP=137     GT:GQ:DP        1/0:99:22       1/0:100:33      1/0:100:76
+2      162083719       rs2358149       G       A       .       PASS    AA=A;DP=102     GT:GQ:DP        1/0:99:23       1/0:100:21      1/0:100:57
+6      79399748        rs12201840      T       C       .       PASS    AA=C;DP=95      GT:GQ:DP        1/0:99:23       1/0:23:23       1/0:100:49
+11     19375570        rs34621135      T       C       .       PASS    AA=C;DP=100     GT:GQ:DP        1/0:99:23       1/0:54:9        1/0:100:66
+8      133098040       rs7003648       G       A       .       PASS    AA=g;DP=96      GT:GQ:DP        1/0:99:23       1/0:67:12       1/0:100:61
+13     35951727        rs1927562       T       A       .       PASS    AA=A;DP=102     GT:GQ:DP        1/0:99:24       1/0:100:23      1/0:100:57
+14     52860886        rs8019508       G       C       .       PASS    AA=C;DP=102     GT:GQ:DP        1/0:99:24       1/0:5:23        1/0:100:55
+20     19740891        rs6035445       G       C       .       PASS    AA=G;DP=124     GT:GQ:DP        1/0:99:26       1/0:100:22      1/0:100:78
+8      17463591        rs2705062       G       A       .       PASS    AA=A;DP=116     GT:GQ:DP        1/0:99:26       1/0:92:14       1/0:100:79
+5      155743532       rs140616        T       C       .       PASS    AA=T;DP=131     GT:GQ:DP        1/0:99:29       1/0:98:21       1/0:100:82
+5      142454439       rs12520307      G       A       .       PASS    AA=G;DP=112     GT:GQ:DP        1/0:99:33       1/0:60:20       1/0:100:52
+14     106344748       .       C       A       .       PASS    AA=.;DP=160     GT:GQ:DP        1/0:99:45       1/0:48:21       1/0:100:91
+1      25116061        rs7535613       G       A       .       PASS    AA=G;DP=128;HM2 GT:GQ:DP        1/0:9:28        1/0:58:14       1/0:100:83
+14     84026738        rs8007880       A       T       .       PASS    AA=T;DP=121     GT:GQ:DP        1|0:100:10      0|0:100:34      1|0:100:76
+7      46110997        rs35055408      A       G       .       PASS    AA=A;DP=82      GT:GQ:DP        1|0:100:10      0|0:59:19       1|0:100:54
+7      9485960 rs7807393       A       T       .       PASS    AA=A;DP=63      GT:GQ:DP        1|0:100:10      1|1:11:14       1|1:90:30
+6      101310847       rs9386250       A       G       .       PASS    AA=A;DP=74      GT:GQ:DP        1|0:100:10      1|1:24:8        1|1:100:56
+5      19407444        rs1553948       A       G       .       PASS    AA=G;DP=79      GT:GQ:DP        1|0:100:10      1|1:30:16       1|1:100:55
+3      164447198       .       T       G       .       PASS    AA=T;DP=79      GT:GQ:DP        1|0:100:11      0|0:41:13       1|0:100:55
+3      89784029        rs55748332      G       C       .       PASS    AA=G;DP=63      GT:GQ:DP        1|0:100:11      0|0:50:17       1|0:100:23
+5      146476919       rs1480163       T       C       .       PASS    AA=T;DP=84      GT:GQ:DP        1|0:100:11      0|0:53:18       1|0:100:40
+6      14439111        rs7762073       G       A       .       PASS    AA=A;DP=58      GT:GQ:DP        1|0:100:11      0|0:56:19       1|0:100:17
+3      41458706        rs7621410       C       T       .       PASS    AA=T;DP=83      GT:GQ:DP        1|0:100:11      1|0:100:17      1|1:100:52
+4      59317414        rs6812401       G       T       .       PASS    AA=T;DP=87      GT:GQ:DP        1|0:100:11      1|0:100:24      1|1:95:50
+2      78162881        rs12472580      T       C       .       PASS    AA=T;DP=60      GT:GQ:DP        1|0:100:11      1|1:39:14       1|1:75:25
+7      11720478        rs11975056      T       C       .       PASS    AA=T;DP=70      GT:GQ:DP        1|0:100:12      0|0:41:13       1|0:100:45
+3      84005100        rs62259183      C       T       .       PASS    AA=T;DP=83      GT:GQ:DP        1|0:100:12      0|0:44:14       1|0:100:55
+13     62197530        .       G       C       .       PASS    AA=G;DP=102     GT:GQ:DP        1|0:100:12      0|0:71:23       1|0:100:65
+6      77821306        .       A       G       .       PASS    AA=G;DP=125     GT:GQ:DP        1|0:100:12      0|0:74:26       1|0:100:36
+8      129308934       rs61249239      G       T       .       PASS    AA=G;DP=103     GT:GQ:DP        1|0:100:13      0|0:23:16       1|0:100:35
+4      64471268        .       G       A       .       PASS    AA=A;DP=79      GT:GQ:DP        1|0:100:13      0|0:29:9        1|0:100:57
+X      20368205        rs5950317       T       G       .       PASS    AA=t;DP=76      GT:GQ:DP        1|0:100:13      0|0:38:12       1|0:76:36
+5      28935421        rs312673        G       A       .       PASS    AA=G;DP=71      GT:GQ:DP        1|0:100:13      0|0:50:17       1|0:100:28
+17     44897671        rs56808683      A       G       .       PASS    AA=A;DP=68      GT:GQ:DP        1|0:100:13      0|0:50:17       1|0:100:36
+4      165584232       rs4234969       A       G       .       PASS    AA=A;DP=64      GT:GQ:DP        1|0:100:13      0|0:53:17       1|0:100:23
+6      98694749        rs2029240       G       C       .       PASS    AA=C;DP=74      GT:GQ:DP        1|0:100:13      0|0:59:20       1|0:100:38
+2      32504026        rs62136287      T       A       .       PASS    AA=T;DP=81      GT:GQ:DP        1|0:100:13      0|0:62:20       1|0:100:48
+4      44338769        .       A       T       .       PASS    AA=A;DP=83      GT:GQ:DP        1|0:100:13      0|0:65:22       1|0:100:43
+11     94071174        .       G       A       .       PASS    AA=G;DP=79      GT:GQ:DP        1|0:100:13      0|0:68:24       1|0:100:31
+7      54502709        rs17172341      C       T       .       PASS    AA=C;DP=83      GT:GQ:DP        1|0:100:13      0|0:71:23       1|0:100:47
+4      135679701       rs13111996      A       T       .       PASS    AA=T;DP=105     GT:GQ:DP        1|0:100:13      0|0:80:26       1|0:100:61
+14     39163072        rs8022773       A       T       .       PASS    AA=A;DP=136     GT:GQ:DP        1|0:100:13      0|0:98:33       1|0:100:46
+10     55307089        rs4364970       A       T       .       PASS    AA=N;DP=60      GT:GQ:DP        1|0:100:13      1|0:100:12      1|1:78:27
+14     21766017        rs10129751      T       C       .       PASS    AA=C;DP=79      GT:GQ:DP        1|0:100:13      1|0:100:19      1|1:93:47
+3      167997319       rs12489043      G       A       .       PASS    AA=A;DP=59      GT:GQ:DP        1|0:100:13      1|0:100:21      1|1:60:21
+10     26766382        .       C       T       .       PASS    AA=C;DP=77      GT:GQ:DP        1|0:100:13      1|0:100:22      1|1:84:30
+5      26819504        rs35193917      T       C       .       PASS    AA=C;DP=86      GT:GQ:DP        1|0:100:13      1|0:100:23      1|1:100:46
+2      143916972       rs6706817       C       G       .       PASS    AA=C;DP=78      GT:GQ:DP        1|0:100:13      1|0:94:26       1|1:84:29
+4      92641279        rs6852821       G       A       .       PASS    AA=G;DP=73      GT:GQ:DP        1|0:100:13      1|1:57:19       1|1:88:41
+11     39043235        rs1461622       T       C       .       PASS    AA=T;DP=87      GT:GQ:DP        1|0:100:13      1|1:66:23       1|1:100:50
+8      51602902        .       A       G       .       PASS    AA=A;DP=77      GT:GQ:DP        1|0:100:14      0|0:34:16       1|0:100:46
+4      92088511        .       T       C       .       PASS    AA=T;DP=65      GT:GQ:DP        1|0:100:14      0|0:38:12       1|0:100:36
+7      51843289        rs59938096      A       C       .       PASS    AA=A;DP=68      GT:GQ:DP        1|0:100:14      0|0:41:13       1|0:100:38
+8      93665500        .       T       G       .       PASS    AA=T;DP=85      GT:GQ:DP        1|0:100:14      0|0:41:13       1|0:100:59
+13     86579309        .       A       G       .       PASS    AA=A;DP=88      GT:GQ:DP        1|0:100:14      0|0:41:13       1|0:100:66
+5      146876027       rs7720830       T       C       .       PASS    AA=T;DP=81      GT:GQ:DP        1|0:100:14      0|0:44:14       1|0:100:53
+3      27862230        .       A       G       .       PASS    AA=A;DP=83      GT:GQ:DP        1|0:100:14      0|0:47:21       1|0:100:45
+4      87451928        rs3926499       A       C       .       PASS    AA=C;DP=96      GT:GQ:DP        1|0:100:14      0|0:50:17       1|0:100:65
+13     38334171        .       A       G       .       PASS    AA=A;DP=76      GT:GQ:DP        1|0:100:14      0|0:50:18       1|0:100:43
+13     36991405        rs1322801       T       A       .       PASS    AA=T;DP=66      GT:GQ:DP        1|0:100:14      0|0:53:17       1|0:100:28
+6      72513383        rs6915774       T       C       .       PASS    AA=T;DP=69      GT:GQ:DP        1|0:100:14      0|0:53:17       1|0:100:37
+5      121603465       rs10477628      A       T       .       PASS    AA=A;DP=79      GT:GQ:DP        1|0:100:14      0|0:53:17       1|0:100:43
+12     89391473        .       T       C       .       PASS    AA=T;DP=77      GT:GQ:DP        1|0:100:14      0|0:56:18       1|0:100:46
+5      29507996        rs6863854       A       G       .       PASS    AA=A;DP=67      GT:GQ:DP        1|0:100:14      0|0:56:19       1|0:100:34
+1      194072708       rs4520401       G       A       .       PASS    AA=G;DP=67      GT:GQ:DP        1|0:100:14      0|0:59:19       1|0:100:25
+4      22032779        .       G       A       .       PASS    AA=G;DP=79      GT:GQ:DP        1|0:100:14      0|0:59:21       1|0:100:47
+2      183560527       .       C       T       .       PASS    AA=C;DP=83      GT:GQ:DP        1|0:100:14      0|0:62:20       1|0:100:46
+3      84378322        rs59919163      T       C       .       PASS    AA=T;DP=84      GT:GQ:DP        1|0:100:14      0|0:62:20       1|0:100:49
+21     22591652        .       T       C       .       PASS    AA=T;DP=76      GT:GQ:DP        1|0:100:14      0|0:74:24       1|0:100:38
+9      80716254        rs59292633      T       A       .       PASS    AA=t;DP=101     GT:GQ:DP        1|0:100:14      0|0:80:27       1|0:100:60
+15     59723648        rs56187701      C       T       .       PASS    AA=C;DP=133     GT:GQ:DP        1|0:100:14      0|0:83:28       1|0:100:48
+14     61031278        rs10140070      C       T       .       PASS    AA=T;DP=109     GT:GQ:DP        1|0:100:14      1|0:100:16      1|1:100:75
+7      135740232       rs1882089       G       A       .       PASS    AA=A;DP=83      GT:GQ:DP        1|0:100:14      1|0:100:19      1|1:100:41
+3      62196081        rs6785764       A       G       .       PASS    AA=G;DP=86      GT:GQ:DP        1|0:100:14      1|0:100:21      1|1:100:39
+16     11226796        rs4781049       G       C       .       PASS    AA=G;DP=61      GT:GQ:DP        1|0:100:14      1|0:46:8        1|1:71:35
+7      88787745        rs38962 C       T       .       PASS    AA=t;DP=94      GT:GQ:DP        1|0:100:14      1|0:59:17       1|1:100:62
+12     20738816        .       T       A       .       PASS    AA=T;DP=58      GT:GQ:DP        1|0:100:14      1|0:89:14       1|1:69:25
+5      101129874       rs34840730      A       C       .       PASS    AA=A;DP=54      GT:GQ:DP        1|0:100:14      1|0:94:16       1|1:57:20
+5      142775103       rs4529231       A       G       .       PASS    AA=A;DP=71      GT:GQ:DP        1|0:100:14      1|1:19:18       1|1:87:39
+2      141813367       rs13406775      C       T       .       PASS    AA=C;DP=70      GT:GQ:DP        1|0:100:14      1|1:27:15       1|1:99:33
+14     20131950        rs1263882       G       A       .       PASS    AA=A;DP=75      GT:GQ:DP        1|0:100:14      1|1:42:14       1|1:100:47
+13     33131794        rs2477453       A       C       .       PASS    AA=C;DP=70      GT:GQ:DP        1|0:100:14      1|1:42:14       1|1:96:32
+4      23879500        rs7674889       A       T       .       PASS    AA=A;DP=81      GT:GQ:DP        1|0:100:14      1|1:54:19       1|1:99:33
+4      29363662        rs2310088       A       G       .       PASS    AA=A;DP=71      GT:GQ:DP        1|0:100:14      1|1:57:19       1|1:75:25
+3      31669722        rs12630628      G       C       .       PASS    AA=C;DP=93      GT:GQ:DP        1|0:100:14      1|1:63:21       1|1:100:54
+2      61338060        rs2060824       T       C       .       PASS    AA=C;DP=99      GT:GQ:DP        1|0:100:14      1|1:69:25       1|1:100:59
+14     25236180        rs12436877      A       G       .       PASS    AA=A;DP=98      GT:GQ:DP        1|0:100:14      1|1:78:26       1|1:91:46
+2      107777551       rs1583938       A       C       .       PASS    AA=C;DP=69      GT:GQ:DP        1|0:100:15      0|0:32:10       1|0:100:42
+2      126289295       rs6736902       G       A       .       PASS    AA=G;DP=87      GT:GQ:DP        1|0:100:15      0|0:37:20       1|0:100:50
+8      110835240       rs13262216      T       C       .       PASS    AA=t;DP=79      GT:GQ:DP        1|0:100:15      0|0:38:12       1|0:100:52
+7      25000656        rs173   C       T       .       PASS    AA=C;DP=62      GT:GQ:DP        1|0:100:15      0|0:44:14       1|0:100:22
+22     20808922        .       A       G       .       PASS    AA=-;DP=90      GT:GQ:DP        1|0:100:15      0|0:44:14       1|0:100:60
+12     86330779        .       C       T       .       PASS    AA=C;DP=96      GT:GQ:DP        1|0:100:15      0|0:44:14       1|0:100:66
+1      67120586        rs6680173       A       T       .       PASS    AA=a;DP=87      GT:GQ:DP        1|0:100:15      0|0:44:20       1|0:100:48
+13     61519818        rs7329339       A       G       .       PASS    AA=A;DP=77      GT:GQ:DP        1|0:100:15      0|0:47:15       1|0:100:35
+4      11749781        rs55814096      G       T       .       PASS    AA=G;DP=86      GT:GQ:DP        1|0:100:15      0|0:47:15       1|0:100:59
+6      124639031       rs2626097       A       G       .       PASS    AA=A;DP=60      GT:GQ:DP        1|0:100:15      0|0:47:15       1|0:23:25
+16     26335962        rs13333839      G       A       .       PASS    AA=G;DP=74      GT:GQ:DP        1|0:100:15      0|0:47:17       1|0:100:42
+7      123832302       rs12668695      G       T       .       PASS    AA=G;DP=107     GT:GQ:DP        1|0:100:15      0|0:49:27       1|0:100:64
+4      173446124       .       T       C       .       PASS    AA=T;DP=69      GT:GQ:DP        1|0:100:15      0|0:50:16       1|0:100:37
+7      81650932        rs7796947       G       A       .       PASS    AA=G;DP=76      GT:GQ:DP        1|0:100:15      0|0:50:16       1|0:100:43
+13     62129071        .       C       A       .       PASS    AA=C;DP=86      GT:GQ:DP        1|0:100:15      0|0:50:16       1|0:100:53
+6      163160127       .       G       C       .       PASS    AA=G;DP=103     GT:GQ:DP        1|0:100:15      0|0:50:18       1|0:100:70
+6      105768024       rs6926090       G       A       .       PASS    AA=g;DP=75      GT:GQ:DP        1|0:100:15      0|0:50:19       1|0:100:41
+2      189239422       .       A       G       .       PASS    AA=A;DP=64      GT:GQ:DP        1|0:100:15      0|0:53:17       1|0:100:29
+1      77664659        rs34783278      A       G       .       PASS    AA=A;DP=92      GT:GQ:DP        1|0:100:15      0|0:53:17       1|0:100:60
+3      116854310       rs61377344      T       A       .       PASS    AA=T;DP=96      GT:GQ:DP        1|0:100:15      0|0:53:17       1|0:100:60
+6      141977530       .       A       T       .       PASS    AA=A;DP=80      GT:GQ:DP        1|0:100:15      0|0:56:18       1|0:100:48
+10     103016798       .       G       T       .       PASS    AA=G;DP=83      GT:GQ:DP        1|0:100:15      0|0:56:18       1|0:100:50
+4      155447404       .       A       G       .       PASS    AA=A;DP=90      GT:GQ:DP        1|0:100:15      0|0:56:18       1|0:100:54
+7      27823660        rs59134341      A       G       .       PASS    AA=A;DP=89      GT:GQ:DP        1|0:100:15      0|0:56:18       1|0:100:55
+8      55996542        rs6993691       A       G       .       PASS    AA=A;DP=95      GT:GQ:DP        1|0:100:15      0|0:56:18       1|0:100:62
+12     41936245        rs11181985      A       T       .       PASS    AA=T;DP=77      GT:GQ:DP        1|0:100:15      0|0:59:19       1|0:100:32
+7      136777428       rs997176        G       A       .       PASS    AA=G;DP=82      GT:GQ:DP        1|0:100:15      0|0:62:21       1|0:100:48
+7      99027658        rs10261661      A       T       .       PASS    AA=A;DP=69      GT:GQ:DP        1|0:100:15      0|0:62:22       1|0:100:26
+11     34402493        rs11032692      G       T       .       PASS    AA=G;DP=119     GT:GQ:DP        1|0:100:15      0|0:65:22       1|0:100:40
+14     45894727        rs34232018      A       G       .       PASS    AA=G;DP=75      GT:GQ:DP        1|0:100:15      0|0:68:22       1|0:100:26
+2      174098603       .       G       T       .       PASS    AA=G;DP=91      GT:GQ:DP        1|0:100:15      0|0:68:22       1|0:100:54
+3      24989462        .       T       G       .       PASS    AA=T;DP=109     GT:GQ:DP        1|0:100:15      0|0:68:22       1|0:100:70
+18     39431443        rs9964177       C       T       .       PASS    AA=.;DP=84      GT:GQ:DP        1|0:100:15      0|0:68:23       1|0:100:44
+6      69763850        .       C       A       .       PASS    AA=C;DP=77      GT:GQ:DP        1|0:100:15      0|0:71:23       1|0:100:36
+3      15858443        rs11128762      G       A       .       PASS    AA=G;DP=123     GT:GQ:DP        1|0:100:15      0|0:71:25       1|0:100:41
+12     80189892        rs11834130      T       A       .       PASS    AA=T;DP=79      GT:GQ:DP        1|0:100:15      0|0:74:24       1|0:100:41
+3      88711375        rs56008493      T       C       .       PASS    AA=T;DP=105     GT:GQ:DP        1|0:100:15      0|0:89:30       1|0:100:60
+5      5473612 rs2860243       C       G       .       PASS    AA=G;DP=83      GT:GQ:DP        1|0:100:15      1|0:100:17      1|1:100:42
+5      23708861        rs12658560      A       T       .       PASS    AA=A;DP=72      GT:GQ:DP        1|0:100:15      1|0:100:18      1|1:90:39
+2      34002361        rs13415908      A       G       .       PASS    AA=G;DP=96      GT:GQ:DP        1|0:100:15      1|0:100:19      1|1:100:60
+3      197475219       rs12630070      G       A       .       PASS    AA=N;DP=81      GT:GQ:DP        1|0:100:15      1|0:100:21      1|1:94:45
+19     955358  rs8110879       G       A       .       PASS    AA=g;DP=108     GT:GQ:DP        1|0:100:15      1|0:100:26      1|1:100:68
+6      98177795        rs6940351       G       T       .       PASS    AA=G;DP=109     GT:GQ:DP        1|0:100:15      1|0:100:27      1|1:92:68
+15     32004402        rs694501        A       G       .       PASS    AA=A;DP=76      GT:GQ:DP        1|0:100:15      1|0:74:24       1|1:72:26
+12     85848043        rs12423178      C       A       .       PASS    AA=A;DP=93      GT:GQ:DP        1|0:100:15      1|0:91:20       1|1:100:57
+9      13369241        rs10118696      T       C       .       PASS    AA=G;DP=88      GT:GQ:DP        1|0:100:15      1|0:93:13       1|1:100:59
+3      105940308       rs777956        A       C       .       PASS    AA=A;DP=73      GT:GQ:DP        1|0:100:15      1|1:10:13       1|1:95:44
+3      117535333       .       A       T       .       PASS    AA=T;DP=64      GT:GQ:DP        1|0:100:15      1|1:15:13       1|1:78:27
+2      120726913       rs934722        A       T       .       PASS    AA=T;DP=68      GT:GQ:DP        1|0:100:15      1|1:27:10       1|1:86:43
+7      21531360        rs1473119       G       A       .       PASS    AA=A;DP=91      GT:GQ:DP        1|0:100:15      1|1:36:12       1|1:100:66
+2      193414511       rs13404136      T       C       .       PASS    AA=T;DP=77      GT:GQ:DP        1|0:100:15      1|1:39:23       1|1:90:30
+6      101936276       rs662360        T       C       .       PASS    AA=T;DP=53      GT:GQ:DP        1|0:100:15      1|1:42:14       1|1:63:21
+12     65505063        rs1921010       G       T       .       PASS    AA=T;DP=87      GT:GQ:DP        1|0:100:15      1|1:45:15       1|1:100:57
+14     42583096        rs11157334      G       T       .       PASS    AA=T;DP=52      GT:GQ:DP        1|0:100:15      1|1:45:15       1|1:34:19
+6      98930912        rs6916079       G       T       .       PASS    AA=T;DP=76      GT:GQ:DP        1|0:100:15      1|1:45:15       1|1:83:44
+2      35298557        rs6724932       G       A       .       PASS    AA=A;DP=68      GT:GQ:DP        1|0:100:15      1|1:45:16       1|1:73:37
+2      211472829       rs4327185       C       T       .       PASS    AA=T;DP=84      GT:GQ:DP        1|0:100:15      1|1:48:16       1|1:95:42
+10     33698649        rs4934603       G       A       .       PASS    AA=A;DP=79      GT:GQ:DP        1|0:100:15      1|1:51:17       1|1:100:47
+4      65512500        rs1968552       T       A       .       PASS    AA=A;DP=69      GT:GQ:DP        1|0:100:15      1|1:51:17       1|1:78:26
+13     21187765        rs561010        C       T       .       PASS    AA=T;DP=76      GT:GQ:DP        1|0:100:15      1|1:54:18       1|1:100:34
+2      139591340       rs2376124       G       A       .       PASS    AA=A;DP=98      GT:GQ:DP        1|0:100:15      1|1:66:22       1|1:100:60
+7      141140469       .       G       T       .       PASS    AA=T;DP=139     GT:GQ:DP        1|0:100:16      0|0:100:38      1|0:100:40
+1      246316157       rs12033903      G       T       .       PASS    AA=G;DP=102     GT:GQ:DP        1|0:100:16      0|0:18:23       1|0:100:63
+14     105808857       rs12436429      G       A       .       PASS    AA=G;DP=92      GT:GQ:DP        1|0:100:16      0|0:20:6        1|0:100:66
+10     65184098        rs3852414       C       T       .       PASS    AA=c;DP=81      GT:GQ:DP        1|0:100:16      0|0:26:19       1|0:100:45
+18     31255700        rs7233482       T       A       .       PASS    AA=A;DP=101     GT:GQ:DP        1|0:100:16      0|0:26:19       1|0:100:61
+13     61986122        rs310917        C       T       .       PASS    AA=C;DP=77      GT:GQ:DP        1|0:100:16      0|0:32:11       1|0:100:50
+3      27101430        rs59702052      T       C       .       PASS    AA=T;DP=68      GT:GQ:DP        1|0:100:16      0|0:34:18       1|0:100:33
+6      96157122        .       G       A       .       PASS    AA=G;DP=77      GT:GQ:DP        1|0:100:16      0|0:35:11       1|0:100:50
+19     38644185        .       C       T       .       PASS    AA=C;DP=54      GT:GQ:DP        1|0:100:16      0|0:35:12       1|0:100:24
+3      3647409 .       G       A       .       PASS    AA=g;DP=99      GT:GQ:DP        1|0:100:16      0|0:35:22       1|0:100:60
+5      54980552        rs11749308      T       G       .       PASS    AA=G;DP=80      GT:GQ:DP        1|0:100:16      0|0:36:24       1|0:100:42
+6      140659305       .       A       G       .       PASS    AA=A;DP=71      GT:GQ:DP        1|0:100:16      0|0:41:13       1|0:100:40
+5      141107371       .       T       C       .       PASS    AA=T;DP=117     GT:GQ:DP        1|0:100:16      0|0:41:14       1|0:100:87
+7      146393537       .       G       T       .       PASS    AA=G;DP=85      GT:GQ:DP        1|0:100:16      0|0:44:14       1|0:100:53
+7      19510832        rs28523538      G       A       .       PASS    AA=G;DP=69      GT:GQ:DP        1|0:100:16      0|0:44:15       1|0:100:38
+2      35563522        rs12618056      G       T       .       PASS    AA=G;DP=68      GT:GQ:DP        1|0:100:16      0|0:47:15       1|0:100:27
+7      55512111        rs815960        C       T       .       PASS    AA=C;DP=119     GT:GQ:DP        1|0:100:16      0|0:49:22       1|0:100:83
+16     7623510 rs57050061      A       G       .       PASS    AA=A;DP=71      GT:GQ:DP        1|0:100:16      0|0:50:16       1|0:100:30
+2      159010161       rs17492911      A       G       .       PASS    AA=A;DP=103     GT:GQ:DP        1|0:100:16      0|0:50:24       1|0:100:63
+2      34091968        rs7560652       G       C       .       PASS    AA=G;DP=84      GT:GQ:DP        1|0:100:16      0|0:52:24       1|0:100:43
+5      107631008       rs17161195      T       C       .       PASS    AA=T;DP=71      GT:GQ:DP        1|0:100:16      0|0:53:17       1|0:100:38
+6      81574390        .       G       A       .       PASS    AA=g;DP=84      GT:GQ:DP        1|0:100:16      0|0:53:17       1|0:100:52
+6      168420461       .       T       A       .       PASS    AA=t;DP=99      GT:GQ:DP        1|0:100:16      0|0:53:17       1|0:100:63
+4      76401292        .       A       C       .       PASS    AA=A;DP=103     GT:GQ:DP        1|0:100:16      0|0:53:17       1|0:100:68
+12     61363319        rs4309201       G       A       .       PASS    AA=G;DP=101     GT:GQ:DP        1|0:100:16      0|0:53:17       1|0:100:69
+20     12967924        .       T       C       .       PASS    AA=T;DP=87      GT:GQ:DP        1|0:100:16      0|0:53:19       1|0:100:57
+4      189561178       .       G       T       .       PASS    AA=G;DP=109     GT:GQ:DP        1|0:100:16      0|0:55:29       1|0:100:64
+11     17639192        .       T       A       .       PASS    AA=T;DP=121     GT:GQ:DP        1|0:100:16      0|0:55:29       1|0:100:68
+4      29569556        .       T       G       .       PASS    AA=T;DP=62      GT:GQ:DP        1|0:100:16      0|0:56:18       1|0:100:18
+16     85114840        rs12926277      C       T       .       PASS    AA=C;DP=104     GT:GQ:DP        1|0:100:16      0|0:59:19       1|0:100:67
+7      3228336 rs61105790      A       C       .       PASS    AA=A;DP=93      GT:GQ:DP        1|0:100:16      0|0:59:20       1|0:100:60
+11     102683414       rs7103012       A       G       .       PASS    AA=A;DP=97      GT:GQ:DP        1|0:100:16      0|0:59:20       1|0:100:61
+13     80508169        .       A       C       .       PASS    AA=A;DP=84      GT:GQ:DP        1|0:100:16      0|0:65:21       1|0:100:48
+11     98401456        rs11218093      G       A       .       PASS    AA=G;DP=90      GT:GQ:DP        1|0:100:16      0|0:65:21       1|0:100:51
+5      83942089        .       C       T       .       PASS    AA=C;DP=73      GT:GQ:DP        1|0:100:16      0|0:65:22       1|0:100:25
+1      239479483       .       A       G       .       PASS    AA=A;DP=83      GT:GQ:DP        1|0:100:16      0|0:65:22       1|0:100:45
+13     90399289        rs9515856       A       G       .       PASS    AA=G;DP=82      GT:GQ:DP        1|0:100:16      0|0:68:22       1|0:100:44
+6      75161373        rs7774754       A       C       .       PASS    AA=A;DP=92      GT:GQ:DP        1|0:100:16      0|0:68:22       1|0:100:48
+10     129178488       rs4751428       T       C       .       PASS    AA=T;DP=96      GT:GQ:DP        1|0:100:16      0|0:68:22       1|0:100:59
+2      118879782       .       A       G       .       PASS    AA=A;DP=107     GT:GQ:DP        1|0:100:16      0|0:68:22       1|0:100:68
+4      160985818       .       G       A       .       PASS    AA=G;DP=105     GT:GQ:DP        1|0:100:16      0|0:68:23       1|0:100:67
+14     29084231        rs11848514      T       A       .       PASS    AA=T;DP=81      GT:GQ:DP        1|0:100:16      0|0:71:23       1|0:100:44
+11     42746340        .       G       A       .       PASS    AA=G;DP=94      GT:GQ:DP        1|0:100:16      0|0:71:23       1|0:100:55
+1      105900374       .       A       G       .       PASS    AA=A;DP=108     GT:GQ:DP        1|0:100:16      0|0:71:23       1|0:100:66
+8      3348242 rs59420002      A       G       .       PASS    AA=A;DP=103     GT:GQ:DP        1|0:100:16      0|0:71:23       1|0:100:69
+14     42067585        .       C       T       .       PASS    AA=C;DP=87      GT:GQ:DP        1|0:100:16      0|0:71:24       1|0:100:47
+4      131532648       rs17051005      T       C       .       PASS    AA=T;DP=94      GT:GQ:DP        1|0:100:16      0|0:74:25       1|0:100:52
+3      76521914        rs3913579       A       G       .       PASS    AA=A;DP=98      GT:GQ:DP        1|0:100:16      0|0:74:25       1|0:100:57
+14     50735497        .       C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        1|0:100:16      0|0:80:28       1|0:100:24
+12     59225354        .       G       A       .       PASS    AA=G;DP=96      GT:GQ:DP        1|0:100:16      0|0:80:28       1|0:100:38
+12     110926969       rs28525994      T       C       .       PASS    AA=T;DP=102     GT:GQ:DP        1|0:100:16      0|0:86:28       1|0:100:57
+2      185407000       .       G       A       .       PASS    AA=G;DP=100     GT:GQ:DP        1|0:100:16      0|0:89:31       1|0:100:54
+13     63025002        rs9539807       A       T       .       PASS    AA=A;DP=65      GT:GQ:DP        1|0:100:16      1|0:100:10      1|1:81:28
+12     8502695 rs10743394      G       A       .       PASS    AA=A;DP=75      GT:GQ:DP        1|0:100:16      1|0:100:13      1|1:100:46
+5      103484183       rs2707411       C       A       .       PASS    AA=A;DP=63      GT:GQ:DP        1|0:100:16      1|0:100:14      1|1:57:20
+9      8758771 rs7873146       C       T       .       PASS    AA=T;DP=82      GT:GQ:DP        1|0:100:16      1|0:100:16      1|1:100:40
+3      111359732       rs7434250       C       T       .       PASS    AA=T;DP=71      GT:GQ:DP        1|0:100:16      1|0:100:16      1|1:87:30
+12     98853008        rs7976437       A       C       .       PASS    AA=C;DP=88      GT:GQ:DP        1|0:100:16      1|0:100:17      1|1:92:55
+1      170809076       .       C       T       .       PASS    AA=T;DP=65      GT:GQ:DP        1|0:100:16      1|0:100:18      1|1:60:21
+10     82629878        rs59076773      A       G       .       PASS    AA=A;DP=82      GT:GQ:DP        1|0:100:16      1|0:100:19      1|1:100:47
+13     34674657        rs34714864      C       T       .       PASS    AA=T;DP=114     GT:GQ:DP        1|0:100:16      1|0:100:19      1|1:100:79
+11     106188145       rs4277082       A       G       .       PASS    AA=A;DP=80      GT:GQ:DP        1|0:100:16      1|0:100:21      1|1:75:42
+6      28535109        rs2859372       C       T       .       PASS    AA=T;DP=86      GT:GQ:DP        1|0:100:16      1|0:100:21      1|1:99:47
+17     66332155        rs7225719       A       T       .       PASS    AA=T;DP=78      GT:GQ:DP        1|0:100:16      1|0:100:22      1|1:63:31
+1      239846830       rs6660991       A       G       .       PASS    AA=A;DP=78;HM2;HM3      GT:GQ:DP        1|0:100:16      1|0:100:22      1|1:87:30
+5      132502553       rs4282364       T       A       .       PASS    AA=T;DP=84      GT:GQ:DP        1|0:100:16      1|0:100:24      1|1:63:44
+1      108356573       rs1781048       A       T       .       PASS    AA=A;DP=100;HM2 GT:GQ:DP        1|0:100:16      1|0:100:26      1|1:100:58
+14     85778771        .       C       T       .       PASS    AA=C;DP=91      GT:GQ:DP        1|0:100:16      1|0:100:28      1|1:96:33
+7      119575771       .       C       G       .       PASS    AA=C;DP=112     GT:GQ:DP        1|0:100:16      1|0:100:29      1|1:100:69
+12     13148327        rs12229957      C       A       .       PASS    AA=A;DP=124     GT:GQ:DP        1|0:100:16      1|0:100:32      1|1:100:77
+5      8084105 rs13183180      C       T       .       PASS    AA=t;DP=66      GT:GQ:DP        1|0:100:16      1|0:38:12       1|1:96:38
+13     86019989        rs9555879       T       A       .       PASS    AA=T;DP=74      GT:GQ:DP        1|0:100:16      1|0:4:17        1|1:84:41
+13     86893121        rs11069294      C       T       .       PASS    AA=T;DP=70      GT:GQ:DP        1|0:100:16      1|0:77:12       1|1:76:42
+4      32145558        rs9992066       T       A       .       PASS    AA=T;DP=71      GT:GQ:DP        1|0:100:16      1|0:89:13       1|1:100:41
+5      38237885        rs6859919       A       T       .       PASS    AA=T;DP=93      GT:GQ:DP        1|0:100:16      1|0:90:24       1|1:100:52
+4      149010775       rs10010960      T       C       .       PASS    AA=N;DP=60      GT:GQ:DP        1|0:100:16      1|0:92:10       1|1:69:24
+5      13659452        rs7717994       G       A       .       PASS    AA=G;DP=78      GT:GQ:DP        1|0:100:16      1|0:92:12       1|1:100:51
+5      19113025        rs10941028      C       T       .       PASS    AA=T;DP=54      GT:GQ:DP        1|0:100:16      1|1:17:16       1|1:63:21
+14     35343751        rs10130092      T       C       .       PASS    AA=N;DP=68      GT:GQ:DP        1|0:100:16      1|1:27:11       1|1:70:35
+19     21332318        rs2928208       T       C       .       PASS    AA=C;DP=65      GT:GQ:DP        1|0:100:16      1|1:27:9        1|1:71:35
+11     24233310        rs7110982       A       T       .       PASS    AA=A;DP=66      GT:GQ:DP        1|0:100:16      1|1:29:15       1|1:75:25
+4      174202442       rs9994207       C       G       .       PASS    AA=C;DP=96      GT:GQ:DP        1|0:100:16      1|1:29:19       1|1:100:62
+1      32950336        rs785797        T       C       .       PASS    AA=C;DP=102     GT:GQ:DP        1|0:100:16      1|1:33:12       1|1:100:74
+18     27441164        rs1611949       C       G       .       PASS    AA=G;DP=114     GT:GQ:DP        1|0:100:16      1|1:35:22       1|1:93:32
+2      193958759       rs16835181      C       T       .       PASS    AA=C;DP=72      GT:GQ:DP        1|0:100:16      1|1:36:13       1|1:100:43
+7      50430614        rs6956528       C       T       .       PASS    AA=T;DP=70      GT:GQ:DP        1|0:100:16      1|1:39:14       1|1:100:41
+6      104669260       rs9391164       T       C       .       PASS    AA=T;DP=67      GT:GQ:DP        1|0:100:16      1|1:42:18       1|1:63:21
+9      104100963       rs10739837      C       T       .       PASS    AA=T;DP=68      GT:GQ:DP        1|0:100:16      1|1:45:15       1|1:100:37
+5      12538936        rs245680        A       G       .       PASS    AA=G;DP=89      GT:GQ:DP        1|0:100:16      1|1:48:16       1|1:100:57
+5      72153040        rs155425        A       T       .       PASS    AA=T;DP=79      GT:GQ:DP        1|0:100:16      1|1:51:17       1|1:90:43
+7      34395056        rs7811969       G       A       .       PASS    AA=G;DP=79      GT:GQ:DP        1|0:100:16      1|1:69:23       1|1:71:40
+9      26212208        rs1369203       G       A       .       PASS    AA=T;DP=88      GT:GQ:DP        1|0:100:16      1|1:72:24       1|1:96:47
+5      89020021        rs5002722       T       C       .       PASS    AA=T;DP=73      GT:GQ:DP        1|0:100:16      1|1:75:25       1|1:72:24
+1      223319215       rs2449261       G       A       .       PASS    AA=G;DP=94      GT:GQ:DP        1|0:100:16      1|1:84:28       1|1:100:37
+18     1431929 rs1226033       T       G       .       PASS    AA=G;DP=132     GT:GQ:DP        1|0:100:17      0|0:100:35      1|0:100:40
+22     17464689        rs2793064       G       A       .       PASS    AA=g;DP=102     GT:GQ:DP        1|0:100:17      0|0:21:17       1|0:100:68
+11     103596788       .       C       T       .       PASS    AA=C;DP=90      GT:GQ:DP        1|0:100:17      0|0:29:9        1|0:100:63
+9      83484245        rs2129106       A       C       .       PASS    AA=A;DP=89      GT:GQ:DP        1|0:100:17      0|0:32:11       1|0:100:60
+8      3720566 rs6998661       C       G       .       PASS    AA=G;DP=83      GT:GQ:DP        1|0:100:17      0|0:35:11       1|0:100:47
+4      9957816 rs28459717      G       T       .       PASS    AA=G;DP=75      GT:GQ:DP        1|0:100:17      0|0:35:11       1|0:100:49
+1      222804433       .       A       G       .       PASS    AA=A;DP=60      GT:GQ:DP        1|0:100:17      0|0:35:11       1|0:75:23
+9      33182327        .       C       T       .       PASS    AA=T;DP=109     GT:GQ:DP        1|0:100:17      0|0:37:17       1|0:100:33
+1      229673228       .       C       T       .       PASS    AA=C;DP=75      GT:GQ:DP        1|0:100:17      0|0:40:23       1|0:100:30
+5      67050970        rs59586667      G       T       .       PASS    AA=T;DP=118     GT:GQ:DP        1|0:100:17      0|0:40:24       1|0:100:78
+8      2503704 rs6986208       C       T       .       PASS    AA=t;DP=74      GT:GQ:DP        1|0:100:17      0|0:41:13       1|0:100:44
+10     17249348        rs11254420      A       G       .       PASS    AA=G;DP=80      GT:GQ:DP        1|0:100:17      0|0:41:13       1|0:100:48
+13     69423045        .       C       A       .       PASS    AA=C;DP=80      GT:GQ:DP        1|0:100:17      0|0:41:13       1|0:100:50
+4      123034067       .       T       C       .       PASS    AA=T;DP=90      GT:GQ:DP        1|0:100:17      0|0:41:13       1|0:100:58
+4      115532731       .       G       A       .       PASS    AA=G;DP=81      GT:GQ:DP        1|0:100:17      0|0:41:15       1|0:100:48
+9      103766390       rs11790679      A       C       .       PASS    AA=A;DP=80      GT:GQ:DP        1|0:100:17      0|0:41:16       1|0:100:46
+12     7620435 rs7299184       T       C       .       PASS    AA=C;DP=74      GT:GQ:DP        1|0:100:17      0|0:44:14       1|0:100:43
+8      3913305 .       A       G       .       PASS    AA=A;DP=80      GT:GQ:DP        1|0:100:17      0|0:44:14       1|0:100:49
+5      72058794        rs3846643       T       A       .       PASS    AA=T;DP=60      GT:GQ:DP        1|0:100:17      0|0:44:14       1|0:76:17
+9      28890971        .       T       G       .       PASS    AA=T;DP=91      GT:GQ:DP        1|0:100:17      0|0:44:15       1|0:100:44
+4      171915941       rs60387969      T       C       .       PASS    AA=T;DP=87      GT:GQ:DP        1|0:100:17      0|0:44:15       1|0:100:55
+8      140319947       rs4406371       G       C       .       PASS    AA=C;DP=111     GT:GQ:DP        1|0:100:17      0|0:46:26       1|0:100:56
+7      132673588       .       T       A       .       PASS    AA=T;DP=56      GT:GQ:DP        1|0:100:17      0|0:47:15       1|0:100:20
+18     60787685        rs60904952      A       G       .       PASS    AA=A;DP=68      GT:GQ:DP        1|0:100:17      0|0:47:15       1|0:100:34
+12     31257357        rs12306406      G       A       .       PASS    AA=.;DP=102     GT:GQ:DP        1|0:100:17      0|0:47:15       1|0:100:70
+3      175969875       rs562502        G       A       .       PASS    AA=A;DP=74      GT:GQ:DP        1|0:100:17      0|0:47:16       1|0:100:40
+6      105263348       rs12205944      T       C       .       PASS    AA=T;DP=78      GT:GQ:DP        1|0:100:17      0|0:50:16       1|0:100:45
+3      105059682       rs1172256       C       T       .       PASS    AA=C;DP=89      GT:GQ:DP        1|0:100:17      0|0:50:19       1|0:100:54
+11     30592870        rs11031150      T       C       .       PASS    AA=T;DP=80      GT:GQ:DP        1|0:100:17      0|0:53:17       1|0:100:44
+6      150759350       .       C       G       .       PASS    AA=C;DP=104     GT:GQ:DP        1|0:100:17      0|0:53:17       1|0:100:73
+12     58524359        rs12049943      A       G       .       PASS    AA=A;DP=92      GT:GQ:DP        1|0:100:17      0|0:53:19       1|0:100:56
+4      79818280        rs11942598      C       G       .       PASS    AA=C;DP=94      GT:GQ:DP        1|0:100:17      0|0:53:20       1|0:100:56
+13     65935799        .       G       T       .       PASS    AA=G;DP=95      GT:GQ:DP        1|0:100:17      0|0:55:28       1|0:100:49
+4      31917524        .       A       T       .       PASS    AA=A;DP=67      GT:GQ:DP        1|0:100:17      0|0:56:18       1|0:100:33
+11     56551639        rs12785712      T       A       .       PASS    AA=T;DP=82      GT:GQ:DP        1|0:100:17      0|0:56:18       1|0:100:43
+6      32741174        rs9274440       A       G       .       PASS    AA=N;DP=72      GT:GQ:DP        1|0:100:17      0|0:56:18       1|0:77:29
+12     21070686        .       A       C       .       PASS    AA=A;DP=96      GT:GQ:DP        1|0:100:17      0|0:56:19       1|0:100:57
+8      33243208        rs59676653      C       T       .       PASS    AA=T;DP=90      GT:GQ:DP        1|0:100:17      0|0:56:20       1|0:100:56
+4      48450654        rs10023560      C       G       .       PASS    AA=C;DP=111     GT:GQ:DP        1|0:100:17      0|0:57:24       1|0:100:70
+6      94928645        rs1750590       T       C       .       PASS    AA=T;DP=97      GT:GQ:DP        1|0:100:17      0|0:59:19       1|0:100:54
+2      80136106        .       G       A       .       PASS    AA=g;DP=98      GT:GQ:DP        1|0:100:17      0|0:59:19       1|0:100:61
+4      68350342        rs2630481       T       C       .       PASS    AA=T;DP=101     GT:GQ:DP        1|0:100:17      0|0:59:19       1|0:100:64
+18     63326692        rs17077389      T       C       .       PASS    AA=T;DP=102     GT:GQ:DP        1|0:100:17      0|0:59:19       1|0:100:66
+4      162208743       rs17040596      A       G       .       PASS    AA=A;DP=117     GT:GQ:DP        1|0:100:17      0|0:62:20       1|0:100:34
+1      237988760       .       C       T       .       PASS    AA=T;DP=102     GT:GQ:DP        1|0:100:17      0|0:62:20       1|0:100:62
+5      147060791       .       G       T       .       PASS    AA=G;DP=111     GT:GQ:DP        1|0:100:17      0|0:63:32       1|0:100:52
+16     75482477        .       A       G       .       PASS    AA=A;DP=81      GT:GQ:DP        1|0:100:17      0|0:65:21       1|0:100:43
+5      103941411       rs62362445      T       C       .       PASS    AA=T;DP=85      GT:GQ:DP        1|0:100:17      0|0:65:21       1|0:100:45
+12     85313836        .       A       C       .       PASS    AA=A;DP=91      GT:GQ:DP        1|0:100:17      0|0:65:21       1|0:100:53
+5      107925982       .       A       G       .       PASS    AA=A;DP=96      GT:GQ:DP        1|0:100:17      0|0:65:21       1|0:100:63
+2      147064707       .       T       G       .       PASS    AA=T;DP=89      GT:GQ:DP        1|0:100:17      0|0:68:22       1|0:100:50
+5      97559666        .       G       A       .       PASS    AA=G;DP=103     GT:GQ:DP        1|0:100:17      0|0:68:23       1|0:100:65
+18     69465557        rs7244912       A       T       .       PASS    AA=A;DP=105     GT:GQ:DP        1|0:100:17      0|0:69:31       1|0:100:58
+2      164649385       rs268269        C       A       .       PASS    AA=C;DP=89      GT:GQ:DP        1|0:100:17      0|0:74:24       1|0:100:49
+18     61949569        .       T       C       .       PASS    AA=T;DP=119     GT:GQ:DP        1|0:100:17      0|0:74:25       1|0:100:56
+16     72490417        rs17332447      A       G       .       PASS    AA=A;DP=119     GT:GQ:DP        1|0:100:17      0|0:74:25       1|0:100:77
+6      96422948        rs62419769      A       G       .       PASS    AA=A;DP=84      GT:GQ:DP        1|0:100:17      0|0:77:25       1|0:100:41
+3      113038903       .       T       C       .       PASS    AA=T;DP=108     GT:GQ:DP        1|0:100:17      0|0:77:26       1|0:100:63
+3      60733321        rs9842547       A       G       .       PASS    AA=N;DP=106     GT:GQ:DP        1|0:100:17      0|0:77:27       1|0:100:62
+1      163859795       rs6701006       A       G       .       PASS    AA=a;DP=85;HM2  GT:GQ:DP        1|0:100:17      0|0:7:23        1|0:100:44
+12     49518882        rs1659375       A       G       .       PASS    AA=A;DP=120     GT:GQ:DP        1|0:100:17      0|0:80:26       1|0:100:35
+9      27147034        rs7856747       A       G       .       PASS    AA=G;DP=93      GT:GQ:DP        1|0:100:17      0|0:80:26       1|0:100:51
+2      35873327        .       T       C       .       PASS    AA=T;DP=99      GT:GQ:DP        1|0:100:17      0|0:83:27       1|0:100:56
+3      119018346       rs4688050       C       T       .       PASS    AA=T;DP=90      GT:GQ:DP        1|0:100:17      0|0:83:28       1|0:100:44
+7      54024142        .       G       A       .       PASS    AA=G;DP=102     GT:GQ:DP        1|0:100:17      0|0:83:28       1|0:100:58
+19     61139206        rs10416683      G       A       .       PASS    AA=G;DP=110     GT:GQ:DP        1|0:100:17      0|0:89:30       1|0:100:61
+15     45719464        .       A       C       .       PASS    AA=A;DP=118     GT:GQ:DP        1|0:100:17      0|0:92:30       1|0:100:71
+11     23235019        rs1384470       A       G       .       PASS    AA=A;DP=86      GT:GQ:DP        1|0:100:17      1|0:100:16      1|1:100:54
+15     90591409        rs4777818       A       G       .       PASS    AA=G;DP=76      GT:GQ:DP        1|0:100:17      1|0:100:17      1|1:100:45
+7      119539686       .       A       G       .       PASS    AA=G;DP=81      GT:GQ:DP        1|0:100:17      1|0:100:17      1|1:100:47
+4      177289577       rs10017197      T       A       .       PASS    AA=A;DP=76      GT:GQ:DP        1|0:100:17      1|0:100:17      1|1:76:41
+11     115662975       rs10891950      T       C       .       PASS    AA=T;DP=111     GT:GQ:DP        1|0:100:17      1|0:100:18      1|1:100:76
+8      124529046       rs4419795       A       C       .       PASS    AA=A;DP=85      GT:GQ:DP        1|0:100:17      1|0:100:18      1|1:86:38
+6      116716894       rs60678552      C       G       .       PASS    AA=C;DP=88      GT:GQ:DP        1|0:100:17      1|0:100:19      1|1:100:51
+10     87594699        rs7899700       A       G       .       PASS    AA=A;DP=84      GT:GQ:DP        1|0:100:17      1|0:100:20      1|1:89:46
+6      102803961       rs2399561       C       T       .       PASS    AA=T;DP=91      GT:GQ:DP        1|0:100:17      1|0:100:24      1|1:100:46
+9      37249236        rs10973275      A       G       .       PASS    AA=A;DP=89      GT:GQ:DP        1|0:100:17      1|0:100:24      1|1:100:47
+5      109336515       rs245264        A       G       .       PASS    AA=A;DP=106     GT:GQ:DP        1|0:100:17      1|0:100:25      1|1:100:64
+11     57389284        rs61444907      A       C       .       PASS    AA=A;DP=110     GT:GQ:DP        1|0:100:17      1|0:100:27      1|1:100:68
+11     122349197       rs1461499       C       A       .       PASS    AA=C;DP=115     GT:GQ:DP        1|0:100:17      1|0:100:27      1|1:100:70
+18     48544569        rs1835716       G       C       .       PASS    AA=C;DP=117     GT:GQ:DP        1|0:100:17      1|0:100:27      1|1:100:73
+20     53662983        rs6123510       C       T       .       PASS    AA=C;DP=66      GT:GQ:DP        1|0:100:17      1|0:52:10       1|1:78:29
+7      55249323        .       A       G       .       PASS    AA=A;DP=98      GT:GQ:DP        1|0:100:17      1|0:53:14       1|1:100:66
+2      184302649       rs12617731      C       T       .       PASS    AA=C;DP=71      GT:GQ:DP        1|0:100:17      1|0:62:15       1|1:74:38
+1      73002935        rs11210055      C       T       .       PASS    AA=T;DP=84;HM2  GT:GQ:DP        1|0:100:17      1|0:71:15       1|1:100:52
+2      161339984       rs4664369       G       A       .       PASS    AA=G;DP=69      GT:GQ:DP        1|0:100:17      1|0:84:21       1|1:75:26
+13     88361667        .       A       G       .       PASS    AA=A;DP=113     GT:GQ:DP        1|0:100:17      1|0:86:27       1|1:100:70
+4      133713665       rs10019033      T       G       .       PASS    AA=G;DP=72      GT:GQ:DP        1|0:100:17      1|0:87:11       1|1:96:46
+2      182140514       rs56200880      C       T       .       PASS    AA=T;DP=70      GT:GQ:DP        1|0:100:17      1|0:94:10       1|1:100:44
+3      133039227       rs12639530      T       C       .       PASS    AA=C;DP=77      GT:GQ:DP        1|0:100:17      1|0:99:12       1|1:100:49
+1      22154305        rs12140171      T       A       .       PASS    AA=A;DP=74;HM2  GT:GQ:DP        1|0:100:17      1|1:24:8        1|1:100:48
+12     73623211        rs12296233      A       T       .       PASS    AA=T;DP=58      GT:GQ:DP        1|0:100:17      1|1:36:12       1|1:66:23
+3      85222876        rs7636138       A       C       .       PASS    AA=C;DP=116     GT:GQ:DP        1|0:100:17      1|1:38:18       1|1:100:81
+14     40558074        rs2600583       T       C       .       PASS    AA=T;DP=68      GT:GQ:DP        1|0:100:17      1|1:39:13       1|1:62:28
+9      8960493 rs10816022      C       T       .       PASS    AA=T;DP=81      GT:GQ:DP        1|0:100:17      1|1:45:15       1|1:72:25
+6      65480452        rs1390269       G       A       .       PASS    AA=A;DP=90      GT:GQ:DP        1|0:100:17      1|1:45:16       1|1:100:59
+15     79536816        rs6495587       C       T       .       PASS    AA=T;DP=90      GT:GQ:DP        1|0:100:17      1|1:48:16       1|1:100:49
+7      137398623       rs1424380       T       C       .       PASS    AA=C;DP=93      GT:GQ:DP        1|0:100:17      1|1:51:17       1|1:100:54
+6      101270327       rs6907444       G       T       .       PASS    AA=G;DP=72      GT:GQ:DP        1|0:100:17      1|1:51:17       1|1:87:36
+7      46357313        rs898930        T       C       .       PASS    AA=T;DP=96      GT:GQ:DP        1|0:100:17      1|1:51:18       1|1:100:61
+6      100544424       rs2397685       C       T       .       PASS    AA=C;DP=73      GT:GQ:DP        1|0:100:17      1|1:54:18       1|1:100:38
+1      217261229       rs1256585       C       T       .       PASS    AA=c;DP=70      GT:GQ:DP        1|0:100:17      1|1:54:18       1|1:72:24
+2      46656438        rs13413254      A       T       .       PASS    AA=A;DP=77      GT:GQ:DP        1|0:100:17      1|1:57:19       1|1:100:41
+3      35024094        rs1531572       A       T       .       PASS    AA=A;DP=70      GT:GQ:DP        1|0:100:17      1|1:57:19       1|1:87:29
+2      102491614       rs6724322       C       T       .       PASS    AA=T;DP=83      GT:GQ:DP        1|0:100:17      1|1:60:20       1|1:96:45
+7      107174831       rs10255946      C       T       .       PASS    AA=C;DP=85      GT:GQ:DP        1|0:100:17      1|1:60:21       1|1:100:46
+6      66643099        rs7762015       T       C       .       PASS    AA=T;DP=89      GT:GQ:DP        1|0:100:17      1|1:60:21       1|1:100:51
+2      70719731        rs1859922       A       G       .       PASS    AA=A;DP=107     GT:GQ:DP        1|0:100:17      1|1:61:26       1|1:100:64
+21     22995334        .       T       A       .       PASS    AA=A;DP=103     GT:GQ:DP        1|0:100:17      1|1:78:26       1|1:100:57
+13     89068638        rs7325733       A       T       .       PASS    AA=A;DP=101     GT:GQ:DP        1|0:100:17      1|1:81:28       1|1:84:56
+11     91177917        rs7947925       C       T       .       PASS    AA=T;DP=103     GT:GQ:DP        1|0:100:17      1|1:87:29       1|1:100:57
+1      163219956       rs17394768      C       T       .       PASS    AA=T;DP=138;HM2 GT:GQ:DP        1|0:100:18      0|0:100:34      1|0:100:87
+1      204697344       rs7546842       G       A       .       PASS    AA=G;DP=139;HM2;HM3     GT:GQ:DP        1|0:100:18      0|0:100:34      1|0:100:88
+7      19360370        .       G       C       .       PASS    AA=G;DP=129     GT:GQ:DP        1|0:100:18      0|0:100:40      1|0:100:72
+11     32236289        rs2418589       T       C       .       PASS    AA=T;DP=88      GT:GQ:DP        1|0:100:18      0|0:12:16       1|0:100:52
+12     15501148        rs6488777       A       T       .       PASS    AA=T;DP=87      GT:GQ:DP        1|0:100:18      0|0:21:17       1|0:100:47
+4      130901780       rs7687465       G       T       .       PASS    AA=G;DP=88      GT:GQ:DP        1|0:100:18      0|0:21:17       1|0:100:54
+11     104940228       rs948782        C       T       .       PASS    AA=T;DP=84      GT:GQ:DP        1|0:100:18      0|0:26:17       1|0:100:48
+6      153294503       rs9384053       C       T       .       PASS    AA=T;DP=102     GT:GQ:DP        1|0:100:18      0|0:26:19       1|0:100:64
+6      147247186       rs7755932       G       A       .       PASS    AA=G;DP=103     GT:GQ:DP        1|0:100:18      0|0:35:12       1|0:100:72
+4      83272026        rs6855138       A       G       .       PASS    AA=A;DP=71      GT:GQ:DP        1|0:100:18      0|0:36:17       1|0:100:24
+11     97587271        rs2852007       T       G       .       PASS    AA=G;DP=78      GT:GQ:DP        1|0:100:18      0|0:38:12       1|0:100:48
+6      45676699        rs7768962       A       C       .       PASS    AA=G;DP=81      GT:GQ:DP        1|0:100:18      0|0:39:21       1|0:100:42
+7      50687765        rs2282927       A       C       .       PASS    AA=C;DP=105     GT:GQ:DP        1|0:100:18      0|0:40:23       1|0:100:63
+6      66763595        rs6455066       A       G       .       PASS    AA=A;DP=57      GT:GQ:DP        1|0:100:18      0|0:41:13       1|0:100:20
+2      1640933 .       C       A       .       PASS    AA=N;DP=77      GT:GQ:DP        1|0:100:18      0|0:41:13       1|0:100:46
+15     51644905        rs2414244       C       A       .       PASS    AA=A;DP=115     GT:GQ:DP        1|0:100:18      0|0:42:25       1|0:100:71
+11     77050426        .       A       T       .       PASS    AA=A;DP=81      GT:GQ:DP        1|0:100:18      0|0:44:14       1|0:100:41
+11     23120553        rs4491218       G       A       .       PASS    AA=G;DP=95      GT:GQ:DP        1|0:100:18      0|0:44:14       1|0:100:61
+11     55481156        rs10792425      G       T       .       PASS    AA=G;DP=100     GT:GQ:DP        1|0:100:18      0|0:44:14       1|0:100:66
+6      128792683       .       A       T       .       PASS    AA=T;DP=86      GT:GQ:DP        1|0:100:18      0|0:44:15       1|0:100:52
+7      19569732        .       C       T       .       PASS    AA=C;DP=80      GT:GQ:DP        1|0:100:18      0|0:44:16       1|0:100:46
+1      115579586       .       A       G       .       PASS    AA=A;DP=97      GT:GQ:DP        1|0:100:18      0|0:45:19       1|0:100:60
+4      177222329       .       G       T       .       PASS    AA=G;DP=75      GT:GQ:DP        1|0:100:18      0|0:45:24       1|0:100:25
+3      112182427       rs16857530      T       C       .       PASS    AA=T;DP=71      GT:GQ:DP        1|0:100:18      0|0:47:15       1|0:100:26
+18     8176727 .       G       A       .       PASS    AA=G;DP=83      GT:GQ:DP        1|0:100:18      0|0:47:15       1|0:100:38
+3      88089452        .       T       G       .       PASS    AA=t;DP=81      GT:GQ:DP        1|0:100:18      0|0:47:15       1|0:100:48
+9      29710092        .       A       G       .       PASS    AA=A;DP=94      GT:GQ:DP        1|0:100:18      0|0:47:16       1|0:100:61
+5      117540528       rs13358190      G       C       .       PASS    AA=G;DP=113     GT:GQ:DP        1|0:100:18      0|0:47:18       1|0:100:70
+12     18235196        .       G       C       .       PASS    AA=G;DP=81      GT:GQ:DP        1|0:100:18      0|0:50:16       1|0:100:45
+11     130032139       .       C       A       .       PASS    AA=A;DP=81      GT:GQ:DP        1|0:100:18      0|0:50:16       1|0:100:47
+6      54704876        rs16885911      A       G       .       PASS    AA=A;DP=92      GT:GQ:DP        1|0:100:18      0|0:50:16       1|0:100:61
+10     105689228       rs11815654      A       T       .       PASS    AA=A;DP=94      GT:GQ:DP        1|0:100:18      0|0:50:16       1|0:100:62
+14     65091077        .       T       C       .       PASS    AA=T;DP=106     GT:GQ:DP        1|0:100:18      0|0:50:16       1|0:100:77
+5      117908124       .       A       C       .       PASS    AA=A;DP=71      GT:GQ:DP        1|0:100:18      0|0:50:16       1|0:84:25
+2      166083425       rs58014149      G       C       .       PASS    AA=G;DP=71      GT:GQ:DP        1|0:100:18      0|0:50:17       1|0:100:26
+8      115138707       rs10100114      C       T       .       PASS    AA=T;DP=92      GT:GQ:DP        1|0:100:18      0|0:50:17       1|0:100:51
+3      56436332        .       G       T       .       PASS    AA=T;DP=98      GT:GQ:DP        1|0:100:18      0|0:50:25       1|0:100:53
+1      155790470       .       A       G       .       PASS    AA=A;DP=125     GT:GQ:DP        1|0:100:18      0|0:53:17       1|0:100:41
+6      102944240       .       A       G       .       PASS    AA=A;DP=62      GT:GQ:DP        1|0:100:18      0|0:53:17       1|0:80:16
+2      14787057        rs2705876       C       T       .       PASS    AA=T;DP=92      GT:GQ:DP        1|0:100:18      0|0:53:18       1|0:100:55
+9      2186447 rs2104340       C       G       .       PASS    AA=A;DP=90      GT:GQ:DP        1|0:100:18      0|0:53:18       1|0:100:55
+13     39885613        rs2245845       A       T       .       PASS    AA=T;DP=85      GT:GQ:DP        1|0:100:18      0|0:55:29       1|0:100:38
+4      63529776        .       T       A       .       PASS    AA=T;DP=71      GT:GQ:DP        1|0:100:18      0|0:56:18       1|0:100:34
+7      1987626 .       G       A       .       PASS    AA=G;DP=86      GT:GQ:DP        1|0:100:18      0|0:56:18       1|0:100:42
+1      67379324        rs9724915       G       C       .       PASS    AA=g;DP=79      GT:GQ:DP        1|0:100:18      0|0:56:18       1|0:100:43
+13     103306182       rs9558181       T       C       .       PASS    AA=C;DP=85      GT:GQ:DP        1|0:100:18      0|0:56:18       1|0:100:50
+5      73121174        rs61045213      A       T       .       PASS    AA=A;DP=89      GT:GQ:DP        1|0:100:18      0|0:56:18       1|0:100:54
+3      24700007        rs4858631       A       G       .       PASS    AA=A;DP=88      GT:GQ:DP        1|0:100:18      0|0:56:19       1|0:100:52
+5      36527717        .       T       A       .       PASS    AA=T;DP=89      GT:GQ:DP        1|0:100:18      0|0:56:24       1|0:100:47
+2      19122465        .       T       C       .       PASS    AA=C;DP=142     GT:GQ:DP        1|0:100:18      0|0:56:27       1|0:100:90
+6      63529447        rs2843091       C       T       .       PASS    AA=c;DP=97      GT:GQ:DP        1|0:100:18      0|0:57:24       1|0:100:52
+15     85805209        rs16940408      T       C       .       PASS    AA=T;DP=85      GT:GQ:DP        1|0:100:18      0|0:59:19       1|0:100:48
+1      108310966       rs17229521      T       G       .       PASS    AA=T;DP=89      GT:GQ:DP        1|0:100:18      0|0:59:19       1|0:100:50
+12     18355019        rs11044021      A       G       .       PASS    AA=A;DP=87      GT:GQ:DP        1|0:100:18      0|0:59:19       1|0:100:52
+5      42078860        rs276300        C       T       .       PASS    AA=T;DP=87      GT:GQ:DP        1|0:100:18      0|0:59:19       1|0:100:52
+1      14653398        rs6429661       A       C       .       PASS    AA=A;DP=99;HM2;HM3      GT:GQ:DP        1|0:100:18      0|0:59:19       1|0:100:60
+2      168154652       .       C       T       .       PASS    AA=C;DP=107     GT:GQ:DP        1|0:100:18      0|0:59:19       1|0:100:69
+15     78951875        rs56066447      T       C       .       PASS    AA=T;DP=118     GT:GQ:DP        1|0:100:18      0|0:59:19       1|0:100:70
+2      222409979       rs35823479      C       T       .       PASS    AA=T;DP=92      GT:GQ:DP        1|0:100:18      0|0:59:20       1|0:100:50
+14     78560925        rs874315        T       C       .       PASS    AA=C;DP=80      GT:GQ:DP        1|0:100:18      0|0:62:20       1|0:100:32
+1      197401778       rs12067783      T       C       .       PASS    AA=T;DP=83;HM2  GT:GQ:DP        1|0:100:18      0|0:62:20       1|0:100:46
+7      70036373        rs1546773       T       C       .       PASS    AA=T;DP=92      GT:GQ:DP        1|0:100:18      0|0:62:20       1|0:100:55
+11     26068412        rs11029176      T       C       .       PASS    AA=T;DP=105     GT:GQ:DP        1|0:100:18      0|0:62:20       1|0:100:68
+13     100306810       rs7989546       A       G       .       PASS    AA=A;DP=108     GT:GQ:DP        1|0:100:18      0|0:62:20       1|0:100:69
+7      83170157        .       T       C       .       PASS    AA=T;DP=102     GT:GQ:DP        1|0:100:18      0|0:62:21       1|0:100:57
+2      227766105       rs4542837       A       T       .       PASS    AA=A;DP=99      GT:GQ:DP        1|0:100:18      0|0:62:21       1|0:100:63
+4      45836485        rs10023736      G       A       .       PASS    AA=G;DP=93      GT:GQ:DP        1|0:100:18      0|0:62:26       1|0:100:50
+3      181353496       rs7631766       T       G       .       PASS    AA=T;DP=101     GT:GQ:DP        1|0:100:18      0|0:64:28       1|0:100:54
+7      83536592        rs17158561      T       G       .       PASS    AA=t;DP=90      GT:GQ:DP        1|0:100:18      0|0:65:21       1|0:100:51
+11     26896104        rs12288441      A       G       .       PASS    AA=A;DP=97      GT:GQ:DP        1|0:100:18      0|0:65:21       1|0:100:57
+19     48107056        rs59139532      G       A       .       PASS    AA=N;DP=101     GT:GQ:DP        1|0:100:18      0|0:65:21       1|0:100:59
+2      68111791        .       T       C       .       PASS    AA=T;DP=99      GT:GQ:DP        1|0:100:18      0|0:65:21       1|0:100:59
+7      144998903       rs10250955      G       C       .       PASS    AA=G;DP=82      GT:GQ:DP        1|0:100:18      0|0:65:22       1|0:100:41
+6      127886029       rs9482817       G       A       .       PASS    AA=G;DP=92      GT:GQ:DP        1|0:100:18      0|0:65:22       1|0:100:46
+11     22486187        rs1514087       C       A       .       PASS    AA=C;DP=91      GT:GQ:DP        1|0:100:18      0|0:65:22       1|0:100:50
+4      102752335       .       A       G       .       PASS    AA=G;DP=91      GT:GQ:DP        1|0:100:18      0|0:68:22       1|0:100:51
+6      96299803        .       T       A       .       PASS    AA=T;DP=89      GT:GQ:DP        1|0:100:18      0|0:68:22       1|0:100:51
+4      36268679        rs4279221       A       C       .       PASS    AA=A;DP=104     GT:GQ:DP        1|0:100:18      0|0:68:22       1|0:100:63
+11     130785451       .       C       A       .       PASS    AA=C;DP=84      GT:GQ:DP        1|0:100:18      0|0:68:23       1|0:100:37
+12     43130040        .       C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        1|0:100:18      0|0:68:23       1|0:100:71
+13     81449841        .       C       T       .       PASS    AA=C;DP=107     GT:GQ:DP        1|0:100:18      0|0:68:24       1|0:100:64
+2      146363436       rs11895335      G       A       .       PASS    AA=G;DP=122     GT:GQ:DP        1|0:100:18      0|0:68:28       1|0:100:64
+13     58233704        .       T       C       .       PASS    AA=C;DP=80      GT:GQ:DP        1|0:100:18      0|0:71:23       1|0:100:39
+7      85129084        .       G       A       .       PASS    AA=G;DP=91      GT:GQ:DP        1|0:100:18      0|0:71:23       1|0:100:48
+2      82274153        rs59872928      C       T       .       PASS    AA=C;DP=92      GT:GQ:DP        1|0:100:18      0|0:71:23       1|0:100:49
+8      51657515        rs57253126      A       G       .       PASS    AA=A;DP=112     GT:GQ:DP        1|0:100:18      0|0:71:23       1|0:100:71
+14     45856901        rs8009392       C       T       .       PASS    AA=c;DP=77      GT:GQ:DP        1|0:100:18      0|0:71:24       1|0:100:27
+3      32071379        rs9822128       A       C       .       PASS    AA=C;DP=118     GT:GQ:DP        1|0:100:18      0|0:71:24       1|0:100:77
+3      151296236       rs61124265      A       G       .       PASS    AA=A;DP=105     GT:GQ:DP        1|0:100:18      0|0:71:26       1|0:100:55
+5      67465088        rs7727769       G       A       .       PASS    AA=A;DP=97      GT:GQ:DP        1|0:100:18      0|0:73:31       1|0:100:38
+8      114187953       .       T       C       .       PASS    AA=T;DP=111     GT:GQ:DP        1|0:100:18      0|0:74:24       1|0:100:72
+7      119721653       .       C       T       .       PASS    AA=c;DP=104     GT:GQ:DP        1|0:100:18      0|0:74:25       1|0:100:61
+3      111636460       .       A       G       .       PASS    AA=G;DP=105     GT:GQ:DP        1|0:100:18      0|0:74:25       1|0:100:62
+10     49232909        .       G       A       .       PASS    AA=G;DP=107     GT:GQ:DP        1|0:100:18      0|0:74:25       1|0:100:64
+18     65132151        rs17762570      G       A       .       PASS    AA=G;DP=95      GT:GQ:DP        1|0:100:18      0|0:74:29       1|0:100:45
+5      152997611       rs2910263       G       A       .       PASS    AA=A;DP=110     GT:GQ:DP        1|0:100:18      0|0:77:25       1|0:100:67
+6      32788703        rs17219302      T       C       .       PASS    AA=N;DP=114     GT:GQ:DP        1|0:100:18      0|0:77:25       1|0:100:72
+4      59634586        .       C       G       .       PASS    AA=C;DP=85      GT:GQ:DP        1|0:100:18      0|0:77:26       1|0:100:41
+7      9730662 .       A       G       .       PASS    AA=A;DP=103     GT:GQ:DP        1|0:100:18      0|0:77:27       1|0:100:57
+13     58060893        rs9597790       G       C       .       PASS    AA=G;DP=112     GT:GQ:DP        1|0:100:18      0|0:77:28       1|0:100:62
+6      129568560       rs57146140      T       G       .       PASS    AA=T;DP=88      GT:GQ:DP        1|0:100:18      0|0:80:26       1|0:100:45
+11     42686419        .       A       G       .       PASS    AA=A;DP=98      GT:GQ:DP        1|0:100:18      0|0:80:26       1|0:100:53
+3      62942368        rs6806614       G       A       .       PASS    AA=G;DP=108     GT:GQ:DP        1|0:100:18      0|0:80:26       1|0:100:64
+8      124590508       .       C       T       .       PASS    AA=c;DP=105     GT:GQ:DP        1|0:100:18      0|0:80:27       1|0:100:59
+7      79417256        rs1005245       G       A       .       PASS    AA=A;DP=99      GT:GQ:DP        1|0:100:18      0|0:83:28       1|0:100:55
+7      112012062       rs58197097      G       A       .       PASS    AA=G;DP=113     GT:GQ:DP        1|0:100:18      0|0:86:30       1|0:100:66
+2      44431170        .       G       A       .       PASS    AA=G;DP=87      GT:GQ:DP        1|0:100:18      0|0:92:30       1|0:100:40
+4      155575723       rs10013533      T       C       .       PASS    AA=T;DP=131     GT:GQ:DP        1|0:100:18      0|0:92:32       1|0:100:37
+6      134174558       .       G       A       .       PASS    AA=G;DP=114     GT:GQ:DP        1|0:100:18      0|0:95:32       1|0:100:63
+21     26696104        rs219613        C       G       .       PASS    AA=C;DP=122     GT:GQ:DP        1|0:100:18      0|0:98:32       1|0:100:71
+18     34795214        rs16971296      G       A       .       PASS    AA=A;DP=90      GT:GQ:DP        1|0:100:18      1|0:100:13      1|1:100:59
+1      103432807       rs9943066       A       G       .       PASS    AA=G;DP=77      GT:GQ:DP        1|0:100:18      1|0:100:14      1|1:100:44
+4      8446165 rs9291391       A       G       .       PASS    AA=G;DP=92      GT:GQ:DP        1|0:100:18      1|0:100:15      1|1:100:60
+6      19293630        rs55889953      C       T       .       PASS    AA=C;DP=64      GT:GQ:DP        1|0:100:18      1|0:100:15      1|1:60:21
+18     73494159        rs6566016       T       C       .       PASS    AA=N;DP=69      GT:GQ:DP        1|0:100:18      1|0:100:16      1|1:87:30
+7      136693308       rs320690        A       G       .       PASS    AA=A;DP=78      GT:GQ:DP        1|0:100:18      1|0:100:16      1|1:94:43
+8      21053760        rs13267839      G       T       .       PASS    AA=T;DP=92      GT:GQ:DP        1|0:100:18      1|0:100:18      1|1:100:58
+5      104121949       rs324344        A       T       .       PASS    AA=T;DP=98      GT:GQ:DP        1|0:100:18      1|0:100:18      1|1:100:60
+13     77639621        rs2254690       G       T       .       PASS    AA=T;DP=93      GT:GQ:DP        1|0:100:18      1|0:100:22      1|1:100:53
+11     38224930        rs16931439      G       A       .       PASS    AA=A;DP=73      GT:GQ:DP        1|0:100:18      1|0:100:25      1|1:60:22
+7      14253379        rs60628751      G       A       .       PASS    AA=G;DP=99      GT:GQ:DP        1|0:100:18      1|0:100:28      1|1:100:54
+4      30184690        rs10028403      T       G       .       PASS    AA=t;DP=124     GT:GQ:DP        1|0:100:18      1|0:100:28      1|1:100:78
+10     66249906        rs971895        A       C       .       PASS    AA=A;DP=89      GT:GQ:DP        1|0:100:18      1|0:100:28      1|1:89:44
+3      123127383       rs1920318       G       T       .       PASS    AA=T;DP=91      GT:GQ:DP        1|0:100:18      1|0:28:12       1|1:100:62
+10     134670763       rs11146108      C       T       .       PASS    AA=c;DP=82      GT:GQ:DP        1|0:100:18      1|0:38:21       1|1:77:36
+3      104836106       rs9864275       A       G       .       PASS    AA=G;DP=60      GT:GQ:DP        1|0:100:18      1|0:68:12       1|1:59:21
+18     59546112        rs2048033       C       T       .       PASS    AA=C;DP=81      GT:GQ:DP        1|0:100:18      1|0:70:11       1|1:78:51
+6      69338429        rs9360353       A       G       .       PASS    AA=A;DP=96      GT:GQ:DP        1|0:100:18      1|0:86:27       1|1:100:51
+12     112500592       rs933869        T       C       .       PASS    AA=C;DP=95      GT:GQ:DP        1|0:100:18      1|0:88:18       1|1:65:59
+6      32763050        rs2856685       A       T       .       PASS    AA=N;DP=64      GT:GQ:DP        1|0:100:18      1|0:89:13       1|1:10:30
+8      68740255        rs10504406      C       G       .       PASS    AA=C;DP=115     GT:GQ:DP        1|0:100:18      1|0:94:19       1|1:100:71
+3      36185939        rs7634584       T       C       .       PASS    AA=T;DP=67      GT:GQ:DP        1|0:100:18      1|0:95:15       1|1:36:35
+7      112945212       .       T       C       .       PASS    AA=T;DP=78      GT:GQ:DP        1|0:100:18      1|0:98:18       1|1:48:28
+13     34776899        rs2244609       T       A       .       PASS    AA=N;DP=75      GT:GQ:DP        1|0:100:18      1|1:10:16       1|1:85:35
+6      8232720 rs2152104       C       T       .       PASS    AA=T;DP=75      GT:GQ:DP        1|0:100:18      1|1:16:22       1|1:40:28
+19     60351049        rs2562509       A       G       .       PASS    AA=-;DP=78      GT:GQ:DP        1|0:100:18      1|1:21:7        1|1:100:52
+6      165728624       rs491517        A       T       .       PASS    AA=A;DP=68      GT:GQ:DP        1|0:100:18      1|1:27:9        1|1:84:28
+4      63774384        rs2635392       T       C       .       PASS    AA=C;DP=104     GT:GQ:DP        1|0:100:18      1|1:30:16       1|1:100:70
+6      83196626        rs1321785       T       A       .       PASS    AA=t;DP=95      GT:GQ:DP        1|0:100:18      1|1:30:21       1|1:99:45
+14     29024415        rs7151440       T       A       .       PASS    AA=A;DP=72      GT:GQ:DP        1|0:100:18      1|1:33:12       1|1:93:31
+6      114598096       rs59158898      T       A       .       PASS    AA=-;DP=56      GT:GQ:DP        1|0:100:18      1|1:36:12       1|1:57:19
+3      108691378       rs6437736       A       G       .       PASS    AA=A;DP=78      GT:GQ:DP        1|0:100:18      1|1:36:13       1|1:68:48
+12     40376944        rs4768363       A       G       .       PASS    AA=G;DP=91      GT:GQ:DP        1|0:100:18      1|1:39:13       1|1:100:55
+2      79470642        .       A       G       .       PASS    AA=A;DP=89      GT:GQ:DP        1|0:100:18      1|1:39:19       1|1:100:52
+13     68746846        rs2065840       A       G       .       PASS    AA=G;DP=78      GT:GQ:DP        1|0:100:18      1|1:42:14       1|1:100:35
+13     83716548        rs9575540       A       G       .       PASS    AA=G;DP=107     GT:GQ:DP        1|0:100:18      1|1:42:18       1|1:100:70
+1      214022927       rs7518466       A       G       .       PASS    AA=a;DP=80;HM2;HM3      GT:GQ:DP        1|0:100:18      1|1:48:16       1|1:100:46
+15     58258709        rs11071505      C       T       .       PASS    AA=C;DP=84      GT:GQ:DP        1|0:100:18      1|1:48:16       1|1:69:50
+18     34419615        rs10853457      C       T       .       PASS    AA=T;DP=78      GT:GQ:DP        1|0:100:18      1|1:48:16       1|1:96:43
+12     14679574        rs1592711       G       A       .       PASS    AA=A;DP=93      GT:GQ:DP        1|0:100:18      1|1:51:17       1|1:100:60
+9      105992476       rs10991151      T       G       .       PASS    AA=T;DP=73      GT:GQ:DP        1|0:100:18      1|1:51:17       1|1:93:31
+4      80691658        rs11098741      A       T       .       PASS    AA=A;DP=71      GT:GQ:DP        1|0:100:18      1|1:54:18       1|1:69:23
+14     78768482        rs7161669       G       T       .       PASS    AA=T;DP=88      GT:GQ:DP        1|0:100:18      1|1:54:19       1|1:100:52
+18     2877886 rs677396        G       A       .       PASS    AA=A;DP=96      GT:GQ:DP        1|0:100:18      1|1:54:19       1|1:100:60
+3      176328942       rs2054329       T       C       .       PASS    AA=C;DP=78      GT:GQ:DP        1|0:100:18      1|1:54:20       1|1:44:29
+21     15090436        rs8126479       A       G       .       PASS    AA=G;DP=83      GT:GQ:DP        1|0:100:18      1|1:54:20       1|1:95:45
+8      106191616       rs285807        G       A       .       PASS    AA=A;DP=69      GT:GQ:DP        1|0:100:18      1|1:57:19       1|1:63:21
+11     99201204        rs1145404       T       C       .       PASS    AA=T;DP=87      GT:GQ:DP        1|0:100:18      1|1:60:20       1|1:100:48
+18     39551082        rs1371726       T       G       .       PASS    AA=.;DP=76      GT:GQ:DP        1|0:100:18      1|1:63:21       1|1:100:39
+5      16750449        rs31576 G       A       .       PASS    AA=A;DP=125     GT:GQ:DP        1|0:100:18      1|1:63:21       1|1:100:87
+1      195849070       rs10922266      T       A       .       PASS    AA=T;DP=106;HM2 GT:GQ:DP        1|0:100:18      1|1:72:24       1|1:100:61
+6      118499674       rs9401055       T       A       .       PASS    AA=A;DP=109     GT:GQ:DP        1|0:100:18      1|1:72:26       1|1:100:67
+5      89301714        rs13362216      T       C       .       PASS    AA=T;DP=116     GT:GQ:DP        1|0:100:18      1|1:75:28       1|1:100:71
+1      195239677       rs7554757       A       T       .       PASS    AA=T;DP=93;HM2  GT:GQ:DP        1|0:100:18      1|1:78:27       1|1:100:50
+4      99165396        rs13110903      A       G       .       PASS    AA=G;DP=108     GT:GQ:DP        1|0:100:19      0|0:100:37      1|0:100:48
+11     112763972       .       C       G       .       PASS    AA=C;DP=71      GT:GQ:DP        1|0:100:19      0|0:10:8        1|0:100:36
+6      62893999        .       G       A       .       PASS    AA=G;DP=80      GT:GQ:DP        1|0:100:19      0|0:11:16       1|0:100:30
+8      60193122        rs61183853      T       C       .       PASS    AA=T;DP=98      GT:GQ:DP        1|0:100:19      0|0:17:10       1|0:100:69
+10     56839689        .       G       T       .       PASS    AA=G;DP=94      GT:GQ:DP        1|0:100:19      0|0:18:16       1|0:100:59
+4      92265084        .       T       C       .       PASS    AA=T;DP=85      GT:GQ:DP        1|0:100:19      0|0:20:6        1|0:100:59
+8      2397925 rs59284469      C       G       .       PASS    AA=N;DP=94      GT:GQ:DP        1|0:100:19      0|0:25:19       1|0:100:44
+7      118337191       rs59418019      C       T       .       PASS    AA=C;DP=89      GT:GQ:DP        1|0:100:19      0|0:26:19       1|0:100:52
+15     29947442        rs56367847      A       T       .       PASS    AA=A;DP=64      GT:GQ:DP        1|0:100:19      0|0:26:9        1|0:100:28
+10     55705580        .       C       T       .       PASS    AA=C;DP=81      GT:GQ:DP        1|0:100:19      0|0:32:13       1|0:100:51
+9      90300239        .       G       A       .       PASS    AA=G;DP=95      GT:GQ:DP        1|0:100:19      0|0:35:11       1|0:100:55
+3      85687854        .       C       A       .       PASS    AA=C;DP=90      GT:GQ:DP        1|0:100:19      0|0:38:13       1|0:100:52
+10     120455196       .       T       C       .       PASS    AA=T;DP=91      GT:GQ:DP        1|0:100:19      0|0:38:13       1|0:100:57
+17     42635004        .       C       G       .       PASS    AA=G;DP=96      GT:GQ:DP        1|0:100:19      0|0:38:13       1|0:100:64
+2      116979202       rs13022723      C       T       .       PASS    AA=C;DP=80      GT:GQ:DP        1|0:100:19      0|0:41:15       1|0:100:46
+5      164752543       rs12188191      C       A       .       PASS    AA=C;DP=99      GT:GQ:DP        1|0:100:19      0|0:41:27       1|0:100:54
+4      33023943        rs975476        T       A       .       PASS    AA=t;DP=69      GT:GQ:DP        1|0:100:19      0|0:42:18       1|0:100:33
+2      165023040       .       G       A       .       PASS    AA=G;DP=110     GT:GQ:DP        1|0:100:19      0|0:43:25       1|0:100:68
+2      77700193        rs62161486      A       C       .       PASS    AA=C;DP=70      GT:GQ:DP        1|0:100:19      0|0:44:14       1|0:100:38
+13     76997334        rs613640        C       T       .       PASS    AA=C;DP=78      GT:GQ:DP        1|0:100:19      0|0:44:14       1|0:100:47
+16     62562062        rs1461183       G       A       .       PASS    AA=A;DP=90      GT:GQ:DP        1|0:100:19      0|0:44:14       1|0:100:57
+10     99890470        .       C       T       .       PASS    AA=C;DP=84      GT:GQ:DP        1|0:100:19      0|0:44:15       1|0:100:37
+2      12440867        rs34260221      A       C       .       PASS    AA=A;DP=72      GT:GQ:DP        1|0:100:19      0|0:47:15       1|0:100:30
+1      192904935       .       C       T       .       PASS    AA=c;DP=65      GT:GQ:DP        1|0:100:19      0|0:47:15       1|0:100:32
+9      12272741        .       A       G       .       PASS    AA=A;DP=76      GT:GQ:DP        1|0:100:19      0|0:47:15       1|0:100:41
+3      79781707        .       C       T       .       PASS    AA=C;DP=77      GT:GQ:DP        1|0:100:19      0|0:47:15       1|0:100:44
+7      9941421 rs62443899      G       C       .       PASS    AA=G;DP=92      GT:GQ:DP        1|0:100:19      0|0:47:15       1|0:100:57
+5      125621801       .       C       T       .       PASS    AA=c;DP=92      GT:GQ:DP        1|0:100:19      0|0:47:16       1|0:100:60
+1      120100545       rs662924        T       A       .       PASS    AA=T;DP=95;HM2  GT:GQ:DP        1|0:100:19      0|0:47:16       1|0:100:63
+2      109731503       .       C       A       .       PASS    AA=C;DP=83      GT:GQ:DP        1|0:100:19      0|0:49:22       1|0:100:34
+2      51618538        .       C       G       .       PASS    AA=C;DP=76      GT:GQ:DP        1|0:100:19      0|0:50:16       1|0:100:40
+5      75449406        .       G       T       .       PASS    AA=G;DP=76      GT:GQ:DP        1|0:100:19      0|0:50:16       1|0:100:43
+12     101961460       rs8181611       T       C       .       PASS    AA=T;DP=84      GT:GQ:DP        1|0:100:19      0|0:50:16       1|0:100:49
+15     94202305        .       A       T       .       PASS    AA=A;DP=85      GT:GQ:DP        1|0:100:19      0|0:50:16       1|0:100:50
+1      96218746        .       A       G       .       PASS    AA=A;DP=90      GT:GQ:DP        1|0:100:19      0|0:50:16       1|0:100:56
+12     84057606        .       T       C       .       PASS    AA=T;DP=106     GT:GQ:DP        1|0:100:19      0|0:50:16       1|0:100:71
+13     89437635        rs9588825       C       G       .       PASS    AA=C;DP=80      GT:GQ:DP        1|0:100:19      0|0:50:17       1|0:100:31
+17     55834343        .       G       A       .       PASS    AA=G;DP=107     GT:GQ:DP        1|0:100:19      0|0:50:18       1|0:100:71
+4      52846429        .       T       C       .       PASS    AA=T;DP=112     GT:GQ:DP        1|0:100:19      0|0:50:19       1|0:100:76
+19     33972763        rs16961881      C       T       .       PASS    AA=T;DP=98      GT:GQ:DP        1|0:100:19      0|0:50:23       1|0:100:57
+4      166489935       rs56218993      A       G       .       PASS    AA=A;DP=110     GT:GQ:DP        1|0:100:19      0|0:50:23       1|0:100:69
+14     32657497        .       C       G       .       PASS    AA=C;DP=118     GT:GQ:DP        1|0:100:19      0|0:51:22       1|0:100:31
+7      54567268        rs600744        G       A       .       PASS    AA=A;DP=92      GT:GQ:DP        1|0:100:19      0|0:52:19       1|0:100:28
+13     71004930        .       G       C       .       PASS    AA=G;DP=72      GT:GQ:DP        1|0:100:19      0|0:53:17       1|0:100:25
+11     103524439       rs7940550       T       A       .       PASS    AA=N;DP=71      GT:GQ:DP        1|0:100:19      0|0:53:17       1|0:100:34
+2      129540916       .       C       T       .       PASS    AA=-;DP=85      GT:GQ:DP        1|0:100:19      0|0:53:17       1|0:100:36
+11     106528228       rs7126185       G       C       .       PASS    AA=G;DP=71      GT:GQ:DP        1|0:100:19      0|0:53:17       1|0:100:37
+10     56595158        .       G       C       .       PASS    AA=G;DP=77      GT:GQ:DP        1|0:100:19      0|0:53:17       1|0:100:41
+5      130908642       rs60068196      T       G       .       PASS    AA=T;DP=85      GT:GQ:DP        1|0:100:19      0|0:53:17       1|0:100:46
+4      11124727        .       T       C       .       PASS    AA=T;DP=105     GT:GQ:DP        1|0:100:19      0|0:53:17       1|0:100:67
+11     83861577        .       A       G       .       PASS    AA=A;DP=86      GT:GQ:DP        1|0:100:19      0|0:56:18       1|0:100:32
+5      179333576       .       C       T       .       PASS    AA=C;DP=131     GT:GQ:DP        1|0:100:19      0|0:56:18       1|0:100:47
+8      76892373        .       C       T       .       PASS    AA=C;DP=90      GT:GQ:DP        1|0:100:19      0|0:56:18       1|0:100:54
+19     45303070        .       A       G       .       PASS    AA=-;DP=91      GT:GQ:DP        1|0:100:19      0|0:56:18       1|0:100:56
+7      12652225        rs6971941       A       G       .       PASS    AA=A;DP=96      GT:GQ:DP        1|0:100:19      0|0:56:18       1|0:100:59
+5      50882213        rs2405692       T       A       .       PASS    AA=T;DP=62      GT:GQ:DP        1|0:100:19      0|0:56:18       1|0:80:18
+5      85511078        rs1363270       C       T       .       PASS    AA=T;DP=82      GT:GQ:DP        1|0:100:19      0|0:56:19       1|0:100:42
+5      89557327        rs1434598       C       T       .       PASS    AA=C;DP=81      GT:GQ:DP        1|0:100:19      0|0:56:19       1|0:100:43
+21     44706970        .       C       G       .       PASS    AA=C;DP=109     GT:GQ:DP        1|0:100:19      0|0:56:20       1|0:100:70
+1      237875652       rs10802785      C       G       .       PASS    AA=G;DP=83;HM2  GT:GQ:DP        1|0:100:19      0|0:59:19       1|0:100:33
+1      161579523       rs12142484      A       G       .       PASS    AA=A;DP=84;HM2  GT:GQ:DP        1|0:100:19      0|0:59:19       1|0:100:48
+5      19332184        .       C       G       .       PASS    AA=c;DP=101     GT:GQ:DP        1|0:100:19      0|0:59:19       1|0:100:62
+12     79947883        rs11114694      C       T       .       PASS    AA=T;DP=103     GT:GQ:DP        1|0:100:19      0|0:59:19       1|0:100:67
+8      68916213        .       C       T       .       PASS    AA=c;DP=111     GT:GQ:DP        1|0:100:19      0|0:59:19       1|0:100:72
+4      20372442        rs16869931      T       C       .       PASS    AA=T;DP=112     GT:GQ:DP        1|0:100:19      0|0:59:19       1|0:100:76
+17     8911881 rs9912742       C       T       .       PASS    AA=C;DP=95      GT:GQ:DP        1|0:100:19      0|0:59:20       1|0:100:37
+1      103047325       rs526349        A       G       .       PASS    AA=G;DP=96;HM2  GT:GQ:DP        1|0:100:19      0|0:59:20       1|0:100:59
+6      94291745        .       C       T       .       PASS    AA=C;DP=100     GT:GQ:DP        1|0:100:19      0|0:59:20       1|0:100:60
+1      66056324        rs4259616       C       T       .       PASS    AA=C;DP=105;HM2 GT:GQ:DP        1|0:100:19      0|0:59:20       1|0:100:67
+6      69414059        rs2802696       A       G       .       PASS    AA=A;DP=75      GT:GQ:DP        1|0:100:19      0|0:59:21       1|0:100:22
+7      26753868        rs1548480       C       T       .       PASS    AA=C;DP=109     GT:GQ:DP        1|0:100:19      0|0:62:20       1|0:100:30
+1      232628213       rs4920240       T       A       .       PASS    AA=A;DP=73      GT:GQ:DP        1|0:100:19      0|0:62:20       1|0:100:33
+6      165773275       rs3799189       A       C       .       PASS    AA=A;DP=90      GT:GQ:DP        1|0:100:19      0|0:62:20       1|0:100:49
+13     69225803        rs17085328      A       C       .       PASS    AA=A;DP=95      GT:GQ:DP        1|0:100:19      0|0:62:20       1|0:100:56
+3      63503954        rs11130944      T       C       .       PASS    AA=T;DP=105     GT:GQ:DP        1|0:100:19      0|0:62:20       1|0:100:67
+18     37260279        .       C       T       .       PASS    AA=T;DP=107     GT:GQ:DP        1|0:100:19      0|0:62:20       1|0:100:70
+22     35195590        rs12159295      T       C       .       PASS    AA=.;DP=123     GT:GQ:DP        1|0:100:19      0|0:62:20       1|0:100:83
+5      86066775        rs166223        T       A       .       PASS    AA=A;DP=78      GT:GQ:DP        1|0:100:19      0|0:62:21       1|0:100:38
+5      8860562 rs4702583       C       T       .       PASS    AA=C;DP=83      GT:GQ:DP        1|0:100:19      0|0:62:21       1|0:100:43
+5      50256790        .       C       T       .       PASS    AA=C;DP=87      GT:GQ:DP        1|0:100:19      0|0:62:21       1|0:100:51
+3      184509026       rs6794741       G       A       .       PASS    AA=A;DP=97      GT:GQ:DP        1|0:100:19      0|0:62:21       1|0:100:52
+21     20006203        rs9977980       A       G       .       PASS    AA=A;DP=91      GT:GQ:DP        1|0:100:19      0|0:62:22       1|0:100:52
+8      40938829        rs7005651       G       A       .       PASS    AA=G;DP=87      GT:GQ:DP        1|0:100:19      0|0:65:21       1|0:100:48
+3      78446131        rs60146005      T       G       .       PASS    AA=T;DP=92      GT:GQ:DP        1|0:100:19      0|0:65:21       1|0:100:53
+2      124746068       .       C       T       .       PASS    AA=C;DP=78      GT:GQ:DP        1|0:100:19      0|0:65:22       1|0:100:36
+20     32512272        .       C       T       .       PASS    AA=c;DP=108     GT:GQ:DP        1|0:100:19      0|0:65:22       1|0:100:68
+3      126377034       rs17319456      G       C       .       PASS    AA=G;DP=110     GT:GQ:DP        1|0:100:19      0|0:65:22       1|0:100:69
+9      104881631       rs698477        G       A       .       PASS    AA=G;DP=100     GT:GQ:DP        1|0:100:19      0|0:65:23       1|0:100:58
+4      126413189       .       A       G       .       PASS    AA=A;DP=116     GT:GQ:DP        1|0:100:19      0|0:65:23       1|0:100:77
+2      148225016       rs10182559      A       G       .       PASS    AA=A;DP=80      GT:GQ:DP        1|0:100:19      0|0:68:22       1|0:100:39
+13     85620780        .       G       A       .       PASS    AA=G;DP=85      GT:GQ:DP        1|0:100:19      0|0:68:22       1|0:100:46
+17     68138888        rs12603063      T       C       .       PASS    AA=T;DP=96      GT:GQ:DP        1|0:100:19      0|0:68:22       1|0:100:56
+7      81338068        .       C       T       .       PASS    AA=C;DP=100     GT:GQ:DP        1|0:100:19      0|0:68:22       1|0:100:60
+10     123466433       .       A       G       .       PASS    AA=A;DP=110     GT:GQ:DP        1|0:100:19      0|0:68:22       1|0:100:69
+16     62296116        rs12598203      C       T       .       PASS    AA=C;DP=112     GT:GQ:DP        1|0:100:19      0|0:68:22       1|0:100:72
+8      78031097        .       C       T       .       PASS    AA=C;DP=87      GT:GQ:DP        1|0:100:19      0|0:68:23       1|0:100:46
+4      121701344       rs12504050      A       G       .       PASS    AA=A;DP=109     GT:GQ:DP        1|0:100:19      0|0:68:24       1|0:100:67
+6      40808750        rs7756298       C       T       .       PASS    AA=T;DP=122     GT:GQ:DP        1|0:100:19      0|0:68:24       1|0:100:80
+5      20309516        rs3925823       A       G       .       PASS    AA=A;DP=73      GT:GQ:DP        1|0:100:19      0|0:71:23       1|0:100:22
+7      118101455       rs2063374       C       T       .       PASS    AA=C;DP=105     GT:GQ:DP        1|0:100:19      0|0:71:23       1|0:100:65
+18     36605539        rs16973724      C       A       .       PASS    AA=c;DP=113     GT:GQ:DP        1|0:100:19      0|0:71:23       1|0:100:69
+10     130280331       rs11016367      G       A       .       PASS    AA=G;DP=120     GT:GQ:DP        1|0:100:19      0|0:71:23       1|0:100:80
+3      182400064       rs2567657       A       G       .       PASS    AA=G;DP=91      GT:GQ:DP        1|0:100:19      0|0:71:24       1|0:100:47
+13     105526035       rs12862506      A       G       .       PASS    AA=G;DP=95      GT:GQ:DP        1|0:100:19      0|0:71:24       1|0:100:51
+18     5550422 rs1719990       T       G       .       PASS    AA=T;DP=125     GT:GQ:DP        1|0:100:19      0|0:71:24       1|0:100:82
+6      72550565        rs34083603      T       C       .       PASS    AA=T;DP=127     GT:GQ:DP        1|0:100:19      0|0:71:24       1|0:100:83
+2      181140230       rs6728917       C       T       .       PASS    AA=C;DP=93      GT:GQ:DP        1|0:100:19      0|0:74:24       1|0:100:37
+17     1704149 .       A       T       .       PASS    AA=A;DP=105     GT:GQ:DP        1|0:100:19      0|0:74:24       1|0:100:61
+11     62616417        rs4391823       A       G       .       PASS    AA=A;DP=86      GT:GQ:DP        1|0:100:19      0|0:74:25       1|0:100:40
+3      62454701        rs9840701       A       T       .       PASS    AA=T;DP=87      GT:GQ:DP        1|0:100:19      0|0:74:25       1|0:100:45
+20     40723291        .       C       T       .       PASS    AA=C;DP=113     GT:GQ:DP        1|0:100:19      0|0:74:26       1|0:100:27
+12     96397547        .       C       T       .       PASS    AA=C;DP=122     GT:GQ:DP        1|0:100:19      0|0:75:30       1|0:100:73
+11     59833269        rs11824734      G       A       .       PASS    AA=g;DP=90      GT:GQ:DP        1|0:100:19      0|0:77:25       1|0:100:46
+3      20348036        rs62243536      C       T       .       PASS    AA=C;DP=104     GT:GQ:DP        1|0:100:19      0|0:77:25       1|0:100:59
+4      40690019        rs34585974      G       A       .       PASS    AA=G;DP=118     GT:GQ:DP        1|0:100:19      0|0:77:25       1|0:100:75
+8      61979121        .       C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        1|0:100:19      0|0:77:25       1|0:100:77
+8      33317584        rs60332122      G       A       .       PASS    AA=G;DP=97      GT:GQ:DP        1|0:100:19      0|0:77:26       1|0:100:52
+4      18233979        .       C       T       .       PASS    AA=c;DP=108     GT:GQ:DP        1|0:100:19      0|0:77:26       1|0:100:65
+6      94595137        rs55828529      G       A       .       PASS    AA=A;DP=86      GT:GQ:DP        1|0:100:19      0|0:78:29       1|0:100:26
+18     51914575        rs17090065      G       A       .       PASS    AA=A;DP=106     GT:GQ:DP        1|0:100:19      0|0:80:26       1|0:100:61
+11     30638547        rs12277358      A       T       .       PASS    AA=A;DP=106     GT:GQ:DP        1|0:100:19      0|0:80:26       1|0:100:62
+13     82830821        rs9318938       A       G       .       PASS    AA=A;DP=108     GT:GQ:DP        1|0:100:19      0|0:80:27       1|0:100:58
+13     74644867        .       T       A       .       PASS    AA=T;DP=119     GT:GQ:DP        1|0:100:19      0|0:80:27       1|0:100:75
+7      112968703       .       A       T       .       PASS    AA=A;DP=110     GT:GQ:DP        1|0:100:19      0|0:83:27       1|0:100:64
+1      191892439       .       A       G       .       PASS    AA=A;DP=115     GT:GQ:DP        1|0:100:19      0|0:83:27       1|0:100:69
+7      152977947       rs4726321       T       A       .       PASS    AA=T;DP=128     GT:GQ:DP        1|0:100:19      0|0:83:28       1|0:100:31
+3      15609041        .       A       G       .       PASS    AA=-;DP=112     GT:GQ:DP        1|0:100:19      0|0:83:28       1|0:100:49
+7      26301532        rs972158        G       T       .       PASS    AA=G;DP=113     GT:GQ:DP        1|0:100:19      0|0:83:28       1|0:100:66
+3      153395657       .       A       G       .       PASS    AA=A;DP=126     GT:GQ:DP        1|0:100:19      0|0:83:28       1|0:100:78
+7      67392758        rs6965268       C       T       .       PASS    AA=C;DP=119     GT:GQ:DP        1|0:100:19      0|0:83:29       1|0:100:68
+2      194218825       rs61491284      G       A       .       PASS    AA=G;DP=98      GT:GQ:DP        1|0:100:19      0|0:83:33       1|0:100:47
+12     77368046        rs1031297       G       C       .       PASS    AA=C;DP=120     GT:GQ:DP        1|0:100:19      0|0:86:28       1|0:100:71
+7      130186932       rs11982376      T       C       .       PASS    AA=T;DP=120     GT:GQ:DP        1|0:100:19      0|0:86:28       1|0:100:73
+3      113733261       rs13063171      G       C       .       PASS    AA=G;DP=115     GT:GQ:DP        1|0:100:19      0|0:86:29       1|0:100:68
+10     19600257        rs2499073       C       T       .       PASS    AA=c;DP=118     GT:GQ:DP        1|0:100:19      0|0:89:29       1|0:100:70
+8      3625420 .       G       C       .       PASS    AA=G;DP=120     GT:GQ:DP        1|0:100:19      0|0:92:31       1|0:100:69
+3      106199402       rs13066011      G       A       .       PASS    AA=G;DP=100     GT:GQ:DP        1|0:100:19      0|0:95:32       1|0:100:50
+5      157605079       rs1173468       C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        1|0:100:19      0|0:98:34       1|0:100:62
+6      94015743        rs2450422       G       A       .       PASS    AA=A;DP=67      GT:GQ:DP        1|0:100:19      1|0:100:12      1|1:78:27
+6      4490614 rs9328257       C       T       .       PASS    AA=T;DP=90      GT:GQ:DP        1|0:100:19      1|0:100:13      1|1:100:59
+16     7262761 rs4538031       G       C       .       PASS    AA=C;DP=91      GT:GQ:DP        1|0:100:19      1|0:100:14      1|1:100:59
+7      48447397        rs12718269      T       A       .       PASS    AA=A;DP=65      GT:GQ:DP        1|0:100:19      1|0:100:14      1|1:87:30
+11     56263806        rs630816        T       C       .       PASS    AA=T;DP=89      GT:GQ:DP        1|0:100:19      1|0:100:14      1|1:89:57
+8      76600729        rs58423341      A       G       .       PASS    AA=G;DP=88      GT:GQ:DP        1|0:100:19      1|0:100:16      1|1:100:51
+12     100409887       .       T       C       .       PASS    AA=T;DP=90      GT:GQ:DP        1|0:100:19      1|0:100:16      1|1:84:55
+13     88496509        .       G       A       .       PASS    AA=G;DP=83      GT:GQ:DP        1|0:100:19      1|0:100:17      1|1:100:39
+18     73715834        rs8097984       A       T       .       PASS    AA=A;DP=85      GT:GQ:DP        1|0:100:19      1|0:100:17      1|1:100:49
+2      34309304        rs5023566       G       T       .       PASS    AA=T;DP=74      GT:GQ:DP        1|0:100:19      1|0:100:17      1|1:39:25
+2      17260994        rs55722545      T       C       .       PASS    AA=T;DP=76      GT:GQ:DP        1|0:100:19      1|0:100:18      1|1:81:28
+6      128302175       rs761333        C       G       .       PASS    AA=C;DP=86      GT:GQ:DP        1|0:100:19      1|0:100:19      1|1:100:49
+8      5972385 rs10106426      T       G       .       PASS    AA=G;DP=98      GT:GQ:DP        1|0:100:19      1|0:100:19      1|1:100:61
+9      12414114        rs12337073      T       A       .       PASS    AA=T;DP=61      GT:GQ:DP        1|0:100:19      1|0:100:19      1|1:35:19
+10     34900195        rs59423020      C       A       .       PASS    AA=C;DP=107     GT:GQ:DP        1|0:100:19      1|0:100:21      1|1:100:62
+13     68381588        rs2438456       G       A       .       PASS    AA=A;DP=104     GT:GQ:DP        1|0:100:19      1|0:100:21      1|1:100:66
+8      50676636        rs4410922       C       T       .       PASS    AA=.;DP=79      GT:GQ:DP        1|0:100:19      1|0:100:21      1|1:96:33
+5      12792801        rs6895262       C       T       .       PASS    AA=.;DP=88      GT:GQ:DP        1|0:100:19      1|0:100:23      1|1:100:46
+3      113474519       rs7642447       C       T       .       PASS    AA=T;DP=99      GT:GQ:DP        1|0:100:19      1|0:100:23      1|1:100:57
+14     26249910        rs1955832       A       G       .       PASS    AA=G;DP=111     GT:GQ:DP        1|0:100:19      1|0:100:23      1|1:100:69
+2      77204712        .       G       A       .       PASS    AA=G;DP=78      GT:GQ:DP        1|0:100:19      1|0:100:23      1|1:60:25
+4      122561710       rs9995433       T       G       .       PASS    AA=N;DP=85      GT:GQ:DP        1|0:100:19      1|0:100:23      1|1:80:42
+14     32933948        rs2133892       T       C       .       PASS    AA=C;DP=93      GT:GQ:DP        1|0:100:19      1|0:100:23      1|1:93:49
+3      111156465       rs680008        A       G       .       PASS    AA=G;DP=111     GT:GQ:DP        1|0:100:19      1|0:100:25      1|1:100:55
+11     22041984        rs7128326       A       G       .       PASS    AA=a;DP=81      GT:GQ:DP        1|0:100:19      1|0:100:26      1|1:66:23
+12     71720335        rs13377660      C       T       .       PASS    AA=A;DP=98      GT:GQ:DP        1|0:100:19      1|0:100:27      1|1:100:52
+4      86215583        rs6838806       A       G       .       PASS    AA=A;DP=104     GT:GQ:DP        1|0:100:19      1|0:100:28      1|1:100:56
+2      141584728       rs9287312       C       T       .       PASS    AA=C;DP=112     GT:GQ:DP        1|0:100:19      1|0:100:30      1|1:100:62
+3      35920778        rs1455497       G       A       .       PASS    AA=G;DP=77      GT:GQ:DP        1|0:100:19      1|0:21:16       1|1:96:33
+1      38122193        rs9329570       G       T       .       PASS    AA=T;DP=102;HM2;HM3     GT:GQ:DP        1|0:100:19      1|0:29:19       1|1:100:65
+16     4119955 rs499879        T       C       .       PASS    AA=N;DP=72      GT:GQ:DP        1|0:100:19      1|0:31:18       1|1:31:28
+12     71852751        rs11609647      T       A       .       PASS    AA=A;DP=81      GT:GQ:DP        1|0:100:19      1|0:41:14       1|1:98:47
+7      48553041        rs12670340      A       T       .       PASS    AA=T;DP=79      GT:GQ:DP        1|0:100:19      1|0:50:11       1|1:73:43
+1      167654292       rs7534851       C       T       .       PASS    AA=C;DP=68;HM2  GT:GQ:DP        1|0:100:19      1|0:50:14       1|1:90:34
+4      132250683       rs6534830       T       G       .       PASS    AA=T;DP=91      GT:GQ:DP        1|0:100:19      1|0:65:15       1|1:75:53
+15     35323476        rs28650927      T       C       .       PASS    AA=T;DP=82      GT:GQ:DP        1|0:100:19      1|0:69:9        1|1:100:54
+3      95924574        rs59174987      C       T       .       PASS    AA=C;DP=101     GT:GQ:DP        1|0:100:19      1|0:71:16       1|1:100:63
+16     75525887        rs28602446      A       G       .       PASS    AA=A;DP=84      GT:GQ:DP        1|0:100:19      1|0:72:14       1|1:88:50
+2      35783937        rs7569703       T       C       .       PASS    AA=T;DP=67      GT:GQ:DP        1|0:100:19      1|0:73:10       1|1:100:37
+5      170274628       rs921467        G       T       .       PASS    AA=G;DP=88      GT:GQ:DP        1|0:100:19      1|0:75:14       1|1:100:56
+18     64856600        .       G       A       .       PASS    AA=A;DP=83      GT:GQ:DP        1|0:100:19      1|0:75:16       1|1:100:48
+8      57531394        rs12115083      G       A       .       PASS    AA=G;DP=85      GT:GQ:DP        1|0:100:19      1|0:77:17       1|1:96:48
+3      176306365       rs58074245      A       G       .       PASS    AA=G;DP=94      GT:GQ:DP        1|0:100:19      1|0:79:18       1|1:83:53
+1      227036414       rs2748096       G       C       .       PASS    AA=C;DP=75      GT:GQ:DP        1|0:100:19      1|0:85:19       1|1:90:31
+12     86137015        rs11612619      G       C       .       PASS    AA=G;DP=86      GT:GQ:DP        1|0:100:19      1|0:95:14       1|1:99:48
+12     20592497        rs4762971       A       G       .       PASS    AA=A;DP=101     GT:GQ:DP        1|0:100:19      1|0:96:28       1|1:100:51
+19     23925398        rs10419452      G       T       .       PASS    AA=g;DP=98      GT:GQ:DP        1|0:100:19      1|0:97:15       1|1:100:67
+13     67120650        rs56170315      G       A       .       PASS    AA=A;DP=85      GT:GQ:DP        1|0:100:19      1|0:97:22       1|1:100:43
+2      234246659       rs7349250       A       G       .       PASS    AA=a;DP=87      GT:GQ:DP        1|0:100:19      1|0:99:16       1|1:100:51
+8      3107252 rs7821543       T       C       .       PASS    AA=C;DP=68      GT:GQ:DP        1|0:100:19      1|1:10:10       1|1:100:39
+20     8668401 rs6086574       T       G       .       PASS    AA=T;DP=90      GT:GQ:DP        1|0:100:19      1|1:17:14       1|1:100:55
+5      67973864        rs2547988       C       T       .       PASS    AA=T;DP=74      GT:GQ:DP        1|0:100:19      1|1:21:8        1|1:100:46
+12     123608825       rs701026        A       G       .       PASS    AA=G;DP=67      GT:GQ:DP        1|0:100:19      1|1:24:8        1|1:100:37
+1      232699757       rs4027051       C       T       .       PASS    AA=T;DP=74      GT:GQ:DP        1|0:100:19      1|1:27:9        1|1:67:45
+14     35907724        rs12884915      T       A       .       PASS    AA=A;DP=71      GT:GQ:DP        1|0:100:19      1|1:27:9        1|1:77:43
+16     791192  rs7195712       A       G       .       PASS    AA=a;DP=67      GT:GQ:DP        1|0:100:19      1|1:30:11       1|1:99:35
+9      106468072       rs4743737       T       C       .       PASS    AA=C;DP=66      GT:GQ:DP        1|0:100:19      1|1:30:12       1|1:69:24
+2      233552351       rs938574        G       C       .       PASS    AA=N;DP=96      GT:GQ:DP        1|0:100:19      1|1:33:12       1|1:10:65
+1      230920219       rs7542989       G       T       .       PASS    AA=T;DP=80;HM3  GT:GQ:DP        1|0:100:19      1|1:34:19       1|1:62:32
+5      89612880        rs2916616       A       G       .       PASS    AA=G;DP=76      GT:GQ:DP        1|0:100:19      1|1:35:16       1|1:84:29
+10     23770197        rs4586049       C       T       .       PASS    AA=C;DP=87      GT:GQ:DP        1|0:100:19      1|1:36:23       1|1:100:36
+7      106163717       rs28834450      C       T       .       PASS    AA=C;DP=93      GT:GQ:DP        1|0:100:19      1|1:36:23       1|1:75:50
+3      174348014       rs9855304       A       C       .       PASS    AA=C;DP=93      GT:GQ:DP        1|0:100:19      1|1:39:13       1|1:100:61
+13     68428665        rs2066219       G       A       .       PASS    AA=N;DP=78      GT:GQ:DP        1|0:100:19      1|1:45:15       1|1:99:33
+6      66468052        rs1490130       T       C       .       PASS    AA=C;DP=104     GT:GQ:DP        1|0:100:19      1|1:47:20       1|1:100:70
+16     8543406 rs4564546       T       C       .       PASS    AA=T;DP=75      GT:GQ:DP        1|0:100:19      1|1:48:16       1|1:100:37
+10     57603697        rs4492740       T       C       .       PASS    AA=T;DP=84      GT:GQ:DP        1|0:100:19      1|1:48:16       1|1:60:20
+5      66836967        rs4976078       A       G       .       PASS    AA=A;DP=84      GT:GQ:DP        1|0:100:19      1|1:51:18       1|1:79:43
+15     77327983        rs12593177      C       T       .       PASS    AA=T;DP=77      GT:GQ:DP        1|0:100:19      1|1:54:18       1|1:80:38
+4      66469195        rs976218        T       C       .       PASS    AA=t;DP=109     GT:GQ:DP        1|0:100:19      1|1:57:20       1|1:100:68
+9      21766714        rs7868253       T       C       .       PASS    AA=T;DP=83      GT:GQ:DP        1|0:100:19      1|1:63:21       1|1:96:32
+12     21222255        rs4149050       T       C       .       PASS    AA=T;DP=100     GT:GQ:DP        1|0:100:19      1|1:66:22       1|1:100:61
+20     8348667 rs708915        T       A       .       PASS    AA=A;DP=96      GT:GQ:DP        1|0:100:19      1|1:69:24       1|1:100:51
+11     42601400        rs7123883       A       G       .       PASS    AA=G;DP=85      GT:GQ:DP        1|0:100:19      1|1:72:24       1|1:75:27
+11     98778537        rs7938071       C       T       .       PASS    AA=C;DP=95      GT:GQ:DP        1|0:100:19      1|1:75:25       1|1:100:51
+17     56292886        .       G       A       .       PASS    AA=G;DP=101     GT:GQ:DP        1|0:100:20      0|0:100:34      1|0:100:34
+2      188399062       .       G       A       .       PASS    AA=a;DP=119     GT:GQ:DP        1|0:100:20      0|0:100:34      1|0:100:70
+1      15941468        .       C       T       .       PASS    AA=c;DP=85      GT:GQ:DP        1|0:100:20      0|0:15:10       1|0:100:54
+6      49099505        rs7755316       T       A       .       PASS    AA=T;DP=88      GT:GQ:DP        1|0:100:20      0|0:18:16       1|0:100:51
+2      18459762        rs4404270       G       A       .       PASS    AA=A;DP=92      GT:GQ:DP        1|0:100:20      0|0:26:8        1|0:100:55
+10     58623433        .       T       C       .       PASS    AA=C;DP=70      GT:GQ:DP        1|0:100:20      0|0:29:10       1|0:100:30
+8      23622854        rs1438456       T       C       .       PASS    AA=T;DP=87      GT:GQ:DP        1|0:100:20      0|0:29:16       1|0:100:52
+7      95242854        rs983350        T       A       .       PASS    AA=T;DP=99      GT:GQ:DP        1|0:100:20      0|0:29:18       1|0:100:60
+1      190610872       .       T       G       .       PASS    AA=T;DP=64      GT:GQ:DP        1|0:100:20      0|0:29:9        1|0:100:24
+10     60525958        .       A       T       .       PASS    AA=A;DP=67      GT:GQ:DP        1|0:100:20      0|0:29:9        1|0:51:38
+13     104798313       .       G       A       .       PASS    AA=G;DP=86      GT:GQ:DP        1|0:100:20      0|0:32:12       1|0:100:54
+10     57912248        .       C       A       .       PASS    AA=C;DP=87      GT:GQ:DP        1|0:100:20      0|0:32:25       1|0:100:41
+15     95370027        rs1399068       G       T       .       PASS    AA=G;DP=94      GT:GQ:DP        1|0:100:20      0|0:35:16       1|0:100:36
+9      29366984        .       T       G       .       PASS    AA=T;DP=100     GT:GQ:DP        1|0:100:20      0|0:37:25       1|0:100:54
+6      78960271        rs6920300       T       C       .       PASS    AA=T;DP=76      GT:GQ:DP        1|0:100:20      0|0:38:12       1|0:100:38
+13     61001748        rs59991505      T       A       .       PASS    AA=T;DP=87      GT:GQ:DP        1|0:100:20      0|0:38:12       1|0:100:58
+11     31511825        rs2973906       T       G       .       PASS    AA=T;DP=98      GT:GQ:DP        1|0:100:20      0|0:38:12       1|0:100:66
+7      152263102       .       G       A       .       PASS    AA=G;DP=101     GT:GQ:DP        1|0:100:20      0|0:38:15       1|0:100:66
+3      146269968       .       A       G       .       PASS    AA=A;DP=94      GT:GQ:DP        1|0:100:20      0|0:38:20       1|0:100:55
+14     39427171        rs28875768      A       C       .       PASS    AA=A;DP=88      GT:GQ:DP        1|0:100:20      0|0:39:18       1|0:100:51
+15     44780629        .       A       G       .       PASS    AA=A;DP=66      GT:GQ:DP        1|0:100:20      0|0:41:13       1|0:100:35
+16     80379187        .       C       T       .       PASS    AA=C;DP=92      GT:GQ:DP        1|0:100:20      0|0:41:13       1|0:100:58
+3      187984196       rs266720        C       A       .       PASS    AA=C;DP=105     GT:GQ:DP        1|0:100:20      0|0:41:13       1|0:100:72
+3      118556170       rs9859267       C       G       .       PASS    AA=C;DP=97      GT:GQ:DP        1|0:100:20      0|0:41:14       1|0:100:65
+13     113207873       rs2490963       T       C       .       PASS    AA=C;DP=114     GT:GQ:DP        1|0:100:20      0|0:41:17       1|0:100:77
+11     103153713       .       G       T       .       PASS    AA=g;DP=88      GT:GQ:DP        1|0:100:20      0|0:43:25       1|0:100:34
+3      77960233        .       C       T       .       PASS    AA=C;DP=118     GT:GQ:DP        1|0:100:20      0|0:43:25       1|0:100:76
+4      133143679       rs13144503      T       C       .       PASS    AA=T;DP=68      GT:GQ:DP        1|0:100:20      0|0:44:14       1|0:100:24
+14     36330346        rs848100        G       T       .       PASS    AA=T;DP=78      GT:GQ:DP        1|0:100:20      0|0:44:14       1|0:100:28
+18     53930703        rs28647359      G       T       .       PASS    AA=G;DP=74      GT:GQ:DP        1|0:100:20      0|0:44:14       1|0:100:32
+2      18433641        rs6722721       G       A       .       PASS    AA=A;DP=77      GT:GQ:DP        1|0:100:20      0|0:44:14       1|0:100:44
+1      187876667       .       T       C       .       PASS    AA=t;DP=84      GT:GQ:DP        1|0:100:20      0|0:44:14       1|0:100:49
+2      99291914        rs60294863      A       T       .       PASS    AA=a;DP=82      GT:GQ:DP        1|0:100:20      0|0:44:14       1|0:100:50
+2      30906731        .       T       G       .       PASS    AA=T;DP=87      GT:GQ:DP        1|0:100:20      0|0:44:14       1|0:100:52
+1      44934432        rs12022162      C       A       .       PASS    AA=A;DP=92;HM2;HM3      GT:GQ:DP        1|0:100:20      0|0:44:14       1|0:100:58
+7      110030205       .       C       G       .       PASS    AA=C;DP=93      GT:GQ:DP        1|0:100:20      0|0:44:14       1|0:100:59
+7      109304488       .       C       G       .       PASS    AA=C;DP=94      GT:GQ:DP        1|0:100:20      0|0:44:14       1|0:100:61
+6      132396788       .       A       G       .       PASS    AA=A;DP=112     GT:GQ:DP        1|0:100:20      0|0:44:14       1|0:100:74
+1      115356777       .       C       T       .       PASS    AA=C;DP=109     GT:GQ:DP        1|0:100:20      0|0:44:14       1|0:100:75
+9      2993144 rs10969469      T       C       .       PASS    AA=T;DP=85      GT:GQ:DP        1|0:100:20      0|0:44:15       1|0:100:52
+7      21485330        .       T       C       .       PASS    AA=T;DP=102     GT:GQ:DP        1|0:100:20      0|0:44:15       1|0:100:67
+2      83047652        .       G       A       .       PASS    AA=A;DP=128     GT:GQ:DP        1|0:100:20      0|0:44:33       1|0:100:74
+4      90946241        rs2583964       A       G       .       PASS    AA=G;DP=75      GT:GQ:DP        1|0:100:20      0|0:47:15       1|0:100:33
+20     49200259        .       T       C       .       PASS    AA=C;DP=88      GT:GQ:DP        1|0:100:20      0|0:47:15       1|0:100:52
+13     103847231       rs59457393      G       T       .       PASS    AA=G;DP=87      GT:GQ:DP        1|0:100:20      0|0:47:15       1|0:100:54
+15     91993364        rs16948319      A       G       .       PASS    AA=A;DP=93      GT:GQ:DP        1|0:100:20      0|0:47:15       1|0:100:55
+13     84762674        rs9547133       G       A       .       PASS    AA=g;DP=103     GT:GQ:DP        1|0:100:20      0|0:47:15       1|0:100:68
+5      2917097 rs6870655       A       G       .       PASS    AA=A;DP=102     GT:GQ:DP        1|0:100:20      0|0:47:15       1|0:100:68
+2      239419380       rs9677648       T       C       .       PASS    AA=T;DP=121     GT:GQ:DP        1|0:100:20      0|0:47:15       1|0:100:80
+8      81402464        rs7841418       T       C       .       PASS    AA=T;DP=84      GT:GQ:DP        1|0:100:20      0|0:50:16       1|0:100:47
+4      66556345        rs10031322      A       G       .       PASS    AA=A;DP=90      GT:GQ:DP        1|0:100:20      0|0:50:16       1|0:100:48
+6      96452479        .       T       C       .       PASS    AA=T;DP=65      GT:GQ:DP        1|0:100:20      0|0:50:16       1|0:32:17
+2      46174384        rs2345955       C       T       .       PASS    AA=T;DP=99      GT:GQ:DP        1|0:100:20      0|0:50:18       1|0:100:60
+18     55072014        rs9965498       A       G       .       PASS    AA=G;DP=98      GT:GQ:DP        1|0:100:20      0|0:51:22       1|0:100:55
+2      111488282       rs6730256       G       A       .       PASS    AA=g;DP=110     GT:GQ:DP        1|0:100:20      0|0:51:24       1|0:100:67
+5      158262813       rs1469070       A       G       .       PASS    AA=A;DP=110     GT:GQ:DP        1|0:100:20      0|0:51:25       1|0:100:65
+7      36744391        rs2110855       T       C       .       PASS    AA=T;DP=109     GT:GQ:DP        1|0:100:20      0|0:52:23       1|0:100:67
+5      2657766 rs1374566       A       T       .       PASS    AA=-;DP=86      GT:GQ:DP        1|0:100:20      0|0:53:17       1|0:100:37
+11     72142118        rs6592484       C       T       .       PASS    AA=C;DP=99      GT:GQ:DP        1|0:100:20      0|0:53:17       1|0:100:61
+5      63448516        .       G       T       .       PASS    AA=G;DP=104     GT:GQ:DP        1|0:100:20      0|0:53:17       1|0:100:64
+7      85029824        rs7785631       A       G       .       PASS    AA=A;DP=75      GT:GQ:DP        1|0:100:20      0|0:53:18       1|0:100:26
+7      154091193       rs13227549      C       T       .       PASS    AA=C;DP=80      GT:GQ:DP        1|0:100:20      0|0:53:18       1|0:100:42
+6      37034390        rs697746        A       T       .       PASS    AA=T;DP=84      GT:GQ:DP        1|0:100:20      0|0:53:18       1|0:100:45
+5      116785783       rs2560552       G       C       .       PASS    AA=T;DP=103     GT:GQ:DP        1|0:100:20      0|0:54:23       1|0:100:61
+2      226871386       rs2713537       T       A       .       PASS    AA=T;DP=105     GT:GQ:DP        1|0:100:20      0|0:55:24       1|0:100:60
+10     54373237        .       A       T       .       PASS    AA=T;DP=81      GT:GQ:DP        1|0:100:20      0|0:56:18       1|0:100:27
+1      80007134        rs940401        G       A       .       PASS    AA=g;DP=87;HM2;HM3      GT:GQ:DP        1|0:100:20      0|0:56:18       1|0:100:48
+5      91450129        .       T       C       .       PASS    AA=T;DP=86      GT:GQ:DP        1|0:100:20      0|0:56:18       1|0:100:51
+9      9632439 .       T       C       .       PASS    AA=t;DP=91      GT:GQ:DP        1|0:100:20      0|0:56:18       1|0:100:51
+5      8481466 .       G       A       .       PASS    AA=G;DP=102     GT:GQ:DP        1|0:100:20      0|0:56:18       1|0:100:63
+4      11829580        rs59171960      C       T       .       PASS    AA=C;DP=107     GT:GQ:DP        1|0:100:20      0|0:56:18       1|0:100:68
+16     60329072        rs10500453      A       G       .       PASS    AA=A;DP=117     GT:GQ:DP        1|0:100:20      0|0:56:18       1|0:100:76
+6      68155930        .       A       C       .       PASS    AA=A;DP=86      GT:GQ:DP        1|0:100:20      0|0:56:19       1|0:100:45
+3      66558327        rs12487264      C       T       .       PASS    AA=T;DP=98      GT:GQ:DP        1|0:100:20      0|0:56:19       1|0:100:56
+3      11844387        rs61161216      G       A       .       PASS    AA=G;DP=106     GT:GQ:DP        1|0:100:20      0|0:56:19       1|0:100:66
+5      127087964       rs790834        G       C       .       PASS    AA=C;DP=104     GT:GQ:DP        1|0:100:20      0|0:56:21       1|0:100:62
+2      8342694 rs7596794       T       C       .       PASS    AA=T;DP=138     GT:GQ:DP        1|0:100:20      0|0:58:20       1|0:100:99
+18     5512980 rs9944555       G       T       .       PASS    AA=G;DP=100     GT:GQ:DP        1|0:100:20      0|0:58:28       1|0:100:52
+13     82893495        rs9546381       A       G       .       PASS    AA=A;DP=81      GT:GQ:DP        1|0:100:20      0|0:59:19       1|0:100:40
+4      64900852        .       A       G       .       PASS    AA=A;DP=89      GT:GQ:DP        1|0:100:20      0|0:59:19       1|0:100:50
+9      29408978        .       C       T       .       PASS    AA=C;DP=90      GT:GQ:DP        1|0:100:20      0|0:59:19       1|0:100:52
+11     21815837        rs1487828       T       A       .       PASS    AA=t;DP=92      GT:GQ:DP        1|0:100:20      0|0:59:19       1|0:100:53
+3      71963360        rs17009019      C       T       .       PASS    AA=C;DP=114     GT:GQ:DP        1|0:100:20      0|0:59:19       1|0:100:56
+18     75869349        .       G       A       .       PASS    AA=G;DP=99      GT:GQ:DP        1|0:100:20      0|0:59:19       1|0:100:59
+4      95018717        rs7666492       T       C       .       PASS    AA=T;DP=102     GT:GQ:DP        1|0:100:20      0|0:59:19       1|0:100:63
+2      10854160        rs1734341       T       A       .       PASS    AA=A;DP=103     GT:GQ:DP        1|0:100:20      0|0:59:19       1|0:100:66
+16     49767726        rs58300611      A       G       .       PASS    AA=A;DP=109     GT:GQ:DP        1|0:100:20      0|0:59:19       1|0:100:71
+2      121185008       rs7576958       G       T       .       PASS    AA=G;DP=89      GT:GQ:DP        1|0:100:20      0|0:59:20       1|0:100:49
+12     124003189       rs6488960       A       G       .       PASS    AA=G;DP=97      GT:GQ:DP        1|0:100:20      0|0:59:20       1|0:100:57
+14     24441365        rs8018441       T       C       .       PASS    AA=T;DP=98      GT:GQ:DP        1|0:100:20      0|0:59:20       1|0:100:62
+10     109522156       rs3982274       C       T       .       PASS    AA=C;DP=109     GT:GQ:DP        1|0:100:20      0|0:59:20       1|0:100:69
+1      156586073       rs12038925      G       A       .       PASS    AA=G;DP=112;HM2 GT:GQ:DP        1|0:100:20      0|0:59:20       1|0:100:72
+5      29935896        rs1428327       C       T       .       PASS    AA=T;DP=97      GT:GQ:DP        1|0:100:20      0|0:59:21       1|0:100:54
+4      180109261       rs9990715       A       G       .       PASS    AA=a;DP=100     GT:GQ:DP        1|0:100:20      0|0:59:21       1|0:100:56
+2      189353438       rs10931382      A       G       .       PASS    AA=A;DP=93      GT:GQ:DP        1|0:100:20      0|0:59:22       1|0:100:51
+12     90054386        rs9971952       T       C       .       PASS    AA=C;DP=70      GT:GQ:DP        1|0:100:20      0|0:62:20       1|0:100:19
+1      60962023        rs1818506       T       C       .       PASS    AA=T;DP=78;HM2  GT:GQ:DP        1|0:100:20      0|0:62:20       1|0:100:26
+20     7005789 .       A       G       .       PASS    AA=A;DP=110     GT:GQ:DP        1|0:100:20      0|0:62:20       1|0:100:45
+4      150716437       .       G       A       .       PASS    AA=G;DP=102     GT:GQ:DP        1|0:100:20      0|0:62:20       1|0:100:63
+6      70836909        rs58860000      A       T       .       PASS    AA=T;DP=83      GT:GQ:DP        1|0:100:20      0|0:62:21       1|0:100:40
+8      9131916 rs12682260      G       C       .       PASS    AA=g;DP=133     GT:GQ:DP        1|0:100:20      0|0:62:21       1|0:100:96
+19     20452125        rs11665803      A       G       .       PASS    AA=-;DP=107     GT:GQ:DP        1|0:100:20      0|0:62:22       1|0:100:66
+10     34669663        rs11009741      C       T       .       PASS    AA=C;DP=113     GT:GQ:DP        1|0:100:20      0|0:63:28       1|0:100:66
+10     54954414        rs7086889       G       A       .       PASS    AA=A;DP=74      GT:GQ:DP        1|0:100:20      0|0:65:21       1|0:100:37
+2      117575825       .       A       C       .       PASS    AA=A;DP=86      GT:GQ:DP        1|0:100:20      0|0:65:21       1|0:100:45
+10     67281911        .       G       A       .       PASS    AA=G;DP=93      GT:GQ:DP        1|0:100:20      0|0:65:21       1|0:100:50
+6      94518756        .       A       C       .       PASS    AA=A;DP=101     GT:GQ:DP        1|0:100:20      0|0:65:21       1|0:100:61
+18     58568947        .       A       G       .       PASS    AA=A;DP=106     GT:GQ:DP        1|0:100:20      0|0:65:21       1|0:100:66
+13     92922735        rs11619626      G       A       .       PASS    AA=G;DP=91      GT:GQ:DP        1|0:100:20      0|0:65:22       1|0:100:37
+6      112995958       rs13201873      A       G       .       PASS    AA=A;DP=126     GT:GQ:DP        1|0:100:20      0|0:65:22       1|0:100:39
+2      35336327        .       A       G       .       PASS    AA=A;DP=82      GT:GQ:DP        1|0:100:20      0|0:65:22       1|0:100:40
+4      134611949       .       C       G       .       PASS    AA=C;DP=96      GT:GQ:DP        1|0:100:20      0|0:65:22       1|0:100:41
+5      20558347        rs883155        C       T       .       PASS    AA=C;DP=93      GT:GQ:DP        1|0:100:20      0|0:65:22       1|0:100:48
+5      62763808        rs60292588      T       C       .       PASS    AA=T;DP=94      GT:GQ:DP        1|0:100:20      0|0:65:22       1|0:100:50
+14     36633726        rs60179583      C       T       .       PASS    AA=C;DP=100     GT:GQ:DP        1|0:100:20      0|0:65:22       1|0:100:59
+5      33048552        .       G       C       .       PASS    AA=G;DP=102     GT:GQ:DP        1|0:100:20      0|0:65:22       1|0:100:59
+6      79714834        rs1283320       C       G       .       PASS    AA=C;DP=104     GT:GQ:DP        1|0:100:20      0|0:65:22       1|0:100:62
+2      12795674        rs34392899      A       C       .       PASS    AA=C;DP=98      GT:GQ:DP        1|0:100:20      0|0:68:22       1|0:100:56
+16     46410554        rs7187134       T       C       .       PASS    AA=C;DP=104     GT:GQ:DP        1|0:100:20      0|0:68:22       1|0:100:57
+4      189900595       rs10005449      A       T       .       PASS    AA=T;DP=104     GT:GQ:DP        1|0:100:20      0|0:68:22       1|0:100:63
+4      179397725       rs12642895      A       C       .       PASS    AA=A;DP=108     GT:GQ:DP        1|0:100:20      0|0:68:22       1|0:100:69
+20     4756875 .       A       G       .       PASS    AA=A;DP=116     GT:GQ:DP        1|0:100:20      0|0:68:22       1|0:100:75
+6      104842863       rs201204        G       A       .       PASS    AA=A;DP=86      GT:GQ:DP        1|0:100:20      0|0:68:23       1|0:100:32
+13     91543553        .       T       C       .       PASS    AA=T;DP=97      GT:GQ:DP        1|0:100:20      0|0:68:23       1|0:100:54
+9      7159311 rs10115707      G       A       .       PASS    AA=A;DP=104     GT:GQ:DP        1|0:100:20      0|0:68:23       1|0:100:61
+7      112205341       .       G       C       .       PASS    AA=G;DP=117     GT:GQ:DP        1|0:100:20      0|0:68:25       1|0:100:73
+15     53967589        rs60482539      A       C       .       PASS    AA=A;DP=102     GT:GQ:DP        1|0:100:20      0|0:70:29       1|0:100:54
+5      8802429 rs10434664      G       T       .       PASS    AA=G;DP=91      GT:GQ:DP        1|0:100:20      0|0:71:23       1|0:100:34
+7      82902397        rs6961910       C       A       .       PASS    AA=C;DP=90      GT:GQ:DP        1|0:100:20      0|0:71:23       1|0:100:46
+2      196236983       rs10204800      G       A       .       PASS    AA=G;DP=96      GT:GQ:DP        1|0:100:20      0|0:71:23       1|0:100:53
+12     85086886        .       T       C       .       PASS    AA=T;DP=97      GT:GQ:DP        1|0:100:20      0|0:71:23       1|0:100:54
+1      118883392       rs58262239      T       G       .       PASS    AA=T;DP=100     GT:GQ:DP        1|0:100:20      0|0:71:23       1|0:100:57
+3      114606337       .       T       C       .       PASS    AA=T;DP=114     GT:GQ:DP        1|0:100:20      0|0:71:24       1|0:100:71
+1      75032178        rs17095968      G       A       .       PASS    AA=G;DP=137;HM2;HM3     GT:GQ:DP        1|0:100:20      0|0:71:25       1|0:100:46
+11     91015937        rs7104958       A       G       .       PASS    AA=G;DP=100     GT:GQ:DP        1|0:100:20      0|0:74:24       1|0:100:57
+1      120241172       rs6428846       C       T       .       PASS    AA=C;DP=127;HM2;HM3     GT:GQ:DP        1|0:100:20      0|0:74:24       1|0:100:85
+14     25916939        rs911086        A       C       .       PASS    AA=C;DP=92      GT:GQ:DP        1|0:100:20      0|0:74:25       1|0:100:48
+6      18558200        rs10456828      T       C       .       PASS    AA=C;DP=121     GT:GQ:DP        1|0:100:20      0|0:74:25       1|0:100:75
+16     58575287        rs12447518      A       G       .       PASS    AA=A;DP=99      GT:GQ:DP        1|0:100:20      0|0:77:25       1|0:100:57
+2      1171767 .       A       G       .       PASS    AA=A;DP=114     GT:GQ:DP        1|0:100:20      0|0:77:25       1|0:100:68
+4      86605769        .       A       G       .       PASS    AA=A;DP=113     GT:GQ:DP        1|0:100:20      0|0:77:25       1|0:100:69
+12     32558942        rs59238477      T       C       .       PASS    AA=T;DP=116     GT:GQ:DP        1|0:100:20      0|0:77:25       1|0:100:71
+2      141964769       rs16846250      C       T       .       PASS    AA=C;DP=123     GT:GQ:DP        1|0:100:20      0|0:77:25       1|0:100:75
+7      52212935        rs10238949      T       C       .       PASS    AA=T;DP=85      GT:GQ:DP        1|0:100:20      0|0:77:26       1|0:100:30
+14     82686766        rs1263434       G       T       .       PASS    AA=G;DP=109     GT:GQ:DP        1|0:100:20      0|0:77:27       1|0:100:65
+8      13942410        .       G       C       .       PASS    AA=g;DP=123     GT:GQ:DP        1|0:100:20      0|0:80:26       1|0:100:32
+10     122493119       .       A       T       .       PASS    AA=A;DP=91      GT:GQ:DP        1|0:100:20      0|0:80:26       1|0:100:33
+14     33134398        rs1958548       T       A       .       PASS    AA=T;DP=89      GT:GQ:DP        1|0:100:20      0|0:80:26       1|0:100:42
+18     8498222 rs58404494      A       T       .       PASS    AA=A;DP=95      GT:GQ:DP        1|0:100:20      0|0:80:26       1|0:100:47
+1      230381784       rs11122445      T       C       .       PASS    AA=C;DP=116;HM2 GT:GQ:DP        1|0:100:20      0|0:80:26       1|0:100:65
+17     50457524        rs9891616       T       A       .       PASS    AA=T;DP=81      GT:GQ:DP        1|0:100:20      0|0:80:26       1|0:80:22
+6      66962484        rs12111378      T       C       .       PASS    AA=T;DP=94      GT:GQ:DP        1|0:100:20      0|0:80:27       1|0:100:46
+7      40634383        .       C       T       .       PASS    AA=T;DP=121     GT:GQ:DP        1|0:100:20      0|0:80:27       1|0:100:74
+3      50372311        .       T       C       .       PASS    AA=T;DP=142     GT:GQ:DP        1|0:100:20      0|0:80:28       1|0:100:92
+4      62205959        rs7656051       T       A       .       PASS    AA=T;DP=90      GT:GQ:DP        1|0:100:20      0|0:83:27       1|0:100:33
+4      172095103       .       C       T       .       PASS    AA=C;DP=102     GT:GQ:DP        1|0:100:20      0|0:83:27       1|0:100:54
+16     70383499        rs28704189      G       A       .       PASS    AA=G;DP=127     GT:GQ:DP        1|0:100:20      0|0:83:27       1|0:100:73
+7      92441088        rs424   G       A       .       PASS    AA=G;DP=125     GT:GQ:DP        1|0:100:20      0|0:83:28       1|0:100:66
+1      15141888        .       G       A       .       PASS    AA=G;DP=144     GT:GQ:DP        1|0:100:20      0|0:83:28       1|0:100:96
+2      167224219       .       G       C       .       PASS    AA=G;DP=112     GT:GQ:DP        1|0:100:20      0|0:83:29       1|0:100:55
+18     7492326 .       G       T       .       PASS    AA=G;DP=138     GT:GQ:DP        1|0:100:20      0|0:83:29       1|0:100:77
+12     90345522        rs7295316       T       C       .       PASS    AA=T;DP=135     GT:GQ:DP        1|0:100:20      0|0:83:30       1|0:100:70
+4      24245022        rs60353305      A       G       .       PASS    AA=A;DP=93      GT:GQ:DP        1|0:100:20      0|0:86:28       1|0:100:43
+7      154546134       .       G       A       .       PASS    AA=G;DP=110     GT:GQ:DP        1|0:100:20      0|0:86:28       1|0:100:63
+3      109993492       rs2218634       A       T       .       PASS    AA=a;DP=125     GT:GQ:DP        1|0:100:20      0|0:86:28       1|0:100:76
+16     25088257        rs277891        G       A       .       PASS    AA=G;DP=129     GT:GQ:DP        1|0:100:20      0|0:86:28       1|0:100:82
+5      24068282        rs56737988      T       C       .       PASS    AA=T;DP=107     GT:GQ:DP        1|0:100:20      0|0:86:30       1|0:100:60
+1      219712354       .       C       T       .       PASS    AA=C;DP=109     GT:GQ:DP        1|0:100:20      0|0:89:30       1|0:100:60
+9      83095571        rs35926288      T       G       .       PASS    AA=T;DP=111     GT:GQ:DP        1|0:100:20      0|0:89:30       1|0:100:60
+6      146155693       .       C       G       .       PASS    AA=T;DP=136     GT:GQ:DP        1|0:100:20      0|0:92:31       1|0:100:72
+13     85576554        .       T       C       .       PASS    AA=T;DP=114     GT:GQ:DP        1|0:100:20      0|0:95:31       1|0:100:64
+13     101284383       .       G       A       .       PASS    AA=G;DP=119     GT:GQ:DP        1|0:100:20      0|0:95:32       1|0:100:66
+2      213123078       rs16848802      A       G       .       PASS    AA=A;DP=139     GT:GQ:DP        1|0:100:20      0|0:95:33       1|0:100:88
+19     14805510        rs10406749      G       A       .       PASS    AA=A;DP=63      GT:GQ:DP        1|0:100:20      1|0:100:12      1|1:75:26
+18     22058022        rs7228645       G       A       .       PASS    AA=A;DP=85      GT:GQ:DP        1|0:100:20      1|0:100:15      1|1:100:50
+4      61129898        rs6845401       T       C       .       PASS    AA=C;DP=98      GT:GQ:DP        1|0:100:20      1|0:100:17      1|1:100:65
+11     30457408        rs551935        T       G       .       PASS    AA=T;DP=92      GT:GQ:DP        1|0:100:20      1|0:100:18      1|1:100:52
+4      138983736       rs6823023       T       C       .       PASS    AA=T;DP=76      GT:GQ:DP        1|0:100:20      1|0:100:18      1|1:75:26
+19     4377112 rs59923524      A       G       .       PASS    AA=A;DP=110     GT:GQ:DP        1|0:100:20      1|0:100:18      1|1:96:34
+2      129364372       rs2255216       C       T       .       PASS    AA=C;DP=84      GT:GQ:DP        1|0:100:20      1|0:100:19      1|1:100:45
+2      229020318       rs56681128      G       T       .       PASS    AA=G;DP=97      GT:GQ:DP        1|0:100:20      1|0:100:19      1|1:100:57
+16     72752547        rs9940031       A       T       .       PASS    AA=A;DP=85      GT:GQ:DP        1|0:100:20      1|0:100:19      1|1:88:44
+9      112483729       .       G       A       .       PASS    AA=G;DP=94      GT:GQ:DP        1|0:100:20      1|0:100:20      1|1:100:43
+4      149235701       rs10025943      C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        1|0:100:20      1|0:100:24      1|1:100:77
+12     21166718        rs327543        A       C       .       PASS    AA=C;DP=97      GT:GQ:DP        1|0:100:20      1|0:100:24      1|1:90:53
+1      34016863        rs574753        A       G       .       PASS    AA=G;DP=104;HM2 GT:GQ:DP        1|0:100:20      1|0:100:25      1|1:100:56
+3      35511597        rs59531721      G       T       .       PASS    AA=G;DP=105     GT:GQ:DP        1|0:100:20      1|0:100:25      1|1:100:59
+2      58568039        .       A       G       .       PASS    AA=A;DP=117     GT:GQ:DP        1|0:100:20      1|0:100:25      1|1:100:69
+5      73491711        rs6891167       C       T       .       PASS    AA=C;DP=104     GT:GQ:DP        1|0:100:20      1|0:100:28      1|1:100:56
+7      89531495        rs10273266      C       T       .       PASS    AA=c;DP=108     GT:GQ:DP        1|0:100:20      1|0:100:30      1|1:100:56
+11     20162060        rs1004786       G       A       .       PASS    AA=G;DP=109     GT:GQ:DP        1|0:100:20      1|0:100:30      1|1:100:58
+5      46002185        .       A       G       .       PASS    AA=.;DP=96      GT:GQ:DP        1|0:100:20      1|0:15:20       1|1:100:53
+6      10211126        rs12111229      T       C       .       PASS    AA=T;DP=82      GT:GQ:DP        1|0:100:20      1|0:23:11       1|1:100:49
+18     1461648 .       A       T       .       PASS    AA=A;DP=61      GT:GQ:DP        1|0:100:20      1|0:27:9        1|1:37:22
+3      32464148        rs164212        G       A       .       PASS    AA=G;DP=93      GT:GQ:DP        1|0:100:20      1|0:33:18       1|1:100:56
+11     67973332        rs2291467       C       T       .       PASS    AA=C;DP=105     GT:GQ:DP        1|0:100:20      1|0:34:13       1|1:90:31
+8      103150755       rs34093878      A       G       .       PASS    AA=A;DP=76      GT:GQ:DP        1|0:100:20      1|0:45:15       1|1:78:33
+1      103390975       rs12080813      G       A       .       PASS    AA=G;DP=94;HM2  GT:GQ:DP        1|0:100:20      1|0:55:22       1|1:100:51
+6      19216571        .       T       C       .       PASS    AA=T;DP=59      GT:GQ:DP        1|0:100:20      1|0:58:12       1|1:51:18
+5      25527299        rs13436073      C       A       .       PASS    AA=N;DP=73      GT:GQ:DP        1|0:100:20      1|0:59:14       1|1:78:27
+4      91169785        rs6830566       G       T       .       PASS    AA=T;DP=78      GT:GQ:DP        1|0:100:20      1|0:61:20       1|1:56:26
+2      120310501       rs10177641      C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        1|0:100:20      1|0:63:26       1|1:100:69
+12     122710746       rs6488889       T       C       .       PASS    AA=C;DP=85      GT:GQ:DP        1|0:100:20      1|0:65:15       1|1:66:49
+15     93587615        .       T       C       .       PASS    AA=C;DP=87      GT:GQ:DP        1|0:100:20      1|0:6:20        1|1:100:49
+3      113444116       rs9847583       A       G       .       PASS    AA=A;DP=105     GT:GQ:DP        1|0:100:20      1|0:84:21       1|1:94:44
+16     75148552        rs12934466      C       T       .       PASS    AA=C;DP=87      GT:GQ:DP        1|0:100:20      1|0:97:14       1|1:100:52
+7      19602418        rs62452813      T       G       .       PASS    AA=T;DP=120     GT:GQ:DP        1|0:100:20      1|0:97:19       1|1:100:39
+17     78538161        rs1870372       T       C       .       PASS    AA=C;DP=85      GT:GQ:DP        1|0:100:20      1|1:11:14       1|1:100:50
+3      104588598       rs62270937      T       G       .       PASS    AA=G;DP=90      GT:GQ:DP        1|0:100:20      1|1:16:12       1|1:76:56
+8      25963805        rs9314319       A       C       .       PASS    AA=C;DP=60      GT:GQ:DP        1|0:100:20      1|1:18:6        1|1:87:29
+12     115275417       rs3934048       C       T       .       PASS    AA=T;DP=119     GT:GQ:DP        1|0:100:20      1|1:24:19       1|1:100:79
+2      33968347        rs773824        A       G       .       PASS    AA=G;DP=83      GT:GQ:DP        1|0:100:20      1|1:25:17       1|1:100:46
+15     59486467        rs4254270       T       C       .       PASS    AA=T;DP=84      GT:GQ:DP        1|0:100:20      1|1:29:15       1|1:100:48
+9      125435006       rs10283412      A       T       .       PASS    AA=T;DP=61      GT:GQ:DP        1|0:100:20      1|1:30:10       1|1:44:31
+20     49575231        rs6063664       C       T       .       PASS    AA=T;DP=73      GT:GQ:DP        1|0:100:20      1|1:36:12       1|1:88:40
+1      118564586       rs4659072       T       C       .       PASS    AA=C;DP=79;HM2  GT:GQ:DP        1|0:100:20      1|1:39:13       1|1:100:47
+2      102382476       .       C       A       .       PASS    AA=-;DP=89      GT:GQ:DP        1|0:100:20      1|1:39:13       1|1:89:54
+2      234894057       rs60814978      T       C       .       PASS    AA=C;DP=104     GT:GQ:DP        1|0:100:20      1|1:40:17       1|1:100:67
+2      35410387        .       G       C       .       PASS    AA=G;DP=86      GT:GQ:DP        1|0:100:20      1|1:42:14       1|1:100:48
+22     46387442        rs6007704       A       C       .       PASS    AA=C;DP=74      GT:GQ:DP        1|0:100:20      1|1:42:14       1|1:62:32
+1      63934566        rs2658419       C       T       .       PASS    AA=T;DP=90      GT:GQ:DP        1|0:100:20      1|1:42:15       1|1:100:55
+8      14183352        rs13269662      A       T       .       PASS    AA=T;DP=75      GT:GQ:DP        1|0:100:20      1|1:45:15       1|1:100:43
+7      124302582       rs6466954       T       C       .       PASS    AA=T;DP=79      GT:GQ:DP        1|0:100:20      1|1:45:15       1|1:100:44
+13     38426790        rs7999145       A       G       .       PASS    AA=N;DP=94      GT:GQ:DP        1|0:100:20      1|1:51:17       1|1:100:56
+9      82406344        rs10867590      G       A       .       PASS    AA=A;DP=102     GT:GQ:DP        1|0:100:20      1|1:51:17       1|1:100:60
+6      125109697       rs9372790       G       A       .       PASS    AA=A;DP=73      GT:GQ:DP        1|0:100:20      1|1:54:18       1|1:68:35
+2      77074469        rs1584236       G       C       .       PASS    AA=C;DP=89      GT:GQ:DP        1|0:100:20      1|1:56:19       1|1:72:47
+5      108840383       rs4631225       A       G       .       PASS    AA=G;DP=97      GT:GQ:DP        1|0:100:20      1|1:56:23       1|1:100:57
+3      40876656        rs9840937       G       A       .       PASS    AA=A;DP=88      GT:GQ:DP        1|0:100:20      1|1:57:19       1|1:93:48
+5      91505871        rs6452994       G       A       .       PASS    AA=A;DP=82      GT:GQ:DP        1|0:100:20      1|1:57:19       1|1:99:33
+2      16526995        rs4422157       A       G       .       PASS    AA=A;DP=113     GT:GQ:DP        1|0:100:20      1|1:60:20       1|1:100:74
+1      196717235       rs10801671      A       G       .       PASS    AA=G;DP=111;HM2 GT:GQ:DP        1|0:100:20      1|1:63:21       1|1:84:29
+2      50060236        rs2882594       T       C       .       PASS    AA=t;DP=90      GT:GQ:DP        1|0:100:20      1|1:63:23       1|1:100:47
+14     41396322        rs1957861       A       G       .       PASS    AA=G;DP=104     GT:GQ:DP        1|0:100:20      1|1:63:23       1|1:100:61
+10     59195280        rs906027        A       G       .       PASS    AA=A;DP=97      GT:GQ:DP        1|0:100:20      1|1:63:23       1|1:95:55
+11     94624565        rs10458853      A       G       .       PASS    AA=G;DP=118     GT:GQ:DP        1|0:100:20      1|1:66:22       1|1:100:77
+2      35850977        rs13032137      C       G       .       PASS    AA=G;DP=98      GT:GQ:DP        1|0:100:20      1|1:66:23       1|1:100:55
+4      176170301       rs10024868      T       C       .       PASS    AA=C;DP=108     GT:GQ:DP        1|0:100:20      1|1:68:34       1|1:100:56
+2      36103796        rs7573821       T       C       .       PASS    AA=T;DP=87      GT:GQ:DP        1|0:100:20      1|1:69:23       1|1:100:45
+11     134036846       rs3017988       A       C       .       PASS    AA=C;DP=112     GT:GQ:DP        1|0:100:20      1|1:69:23       1|1:100:68
+4      151016216       .       A       T       .       PASS    AA=T;DP=82      GT:GQ:DP        1|0:100:20      1|1:69:23       1|1:89:40
+1      65718709        rs2025804       G       A       .       PASS    AA=A;DP=109;HM2;HM3     GT:GQ:DP        1|0:100:20      1|1:69:24       1|1:100:62
+5      125217953       rs28729612      A       G       .       PASS    AA=A;DP=92      GT:GQ:DP        1|0:100:20      1|1:72:24       1|1:100:50
+2      102526875       rs6739426       A       G       .       PASS    AA=G;DP=99      GT:GQ:DP        1|0:100:20      1|1:72:24       1|1:100:51
+13     58778520        rs1327921       C       A       .       PASS    AA=C;DP=124     GT:GQ:DP        1|0:100:20      1|1:75:25       1|1:100:80
+7      149840032       rs10238154      C       T       .       PASS    AA=T;DP=101     GT:GQ:DP        1|0:100:20      1|1:75:27       1|1:100:52
+1      85405832        rs817424        T       C       .       PASS    AA=C;DP=79      GT:GQ:DP        1|0:100:20      1|1:7:10        1|1:55:40
+1      192227264       rs610121        C       A       .       PASS    AA=c;DP=110;HM2;HM3     GT:GQ:DP        1|0:100:20      1|1:81:27       1|1:100:66
+4      163375084       rs6833659       T       C       .       PASS    AA=C;DP=120     GT:GQ:DP        1|0:100:20      1|1:87:29       1|1:100:70
+4      150859822       rs10017846      T       C       .       PASS    AA=T;DP=89      GT:GQ:DP        1|0:100:20      1|1:8:21        1|1:70:40
+18     53500742        rs58555484      C       T       .       PASS    AA=C;DP=150     GT:GQ:DP        1|0:100:21      0|0:100:35      1|0:100:43
+12     37712690        rs11610110      G       T       .       PASS    AA=T;DP=136     GT:GQ:DP        1|0:100:21      0|0:100:35      1|0:100:79
+8      6307768 .       A       G       .       PASS    AA=A;DP=129     GT:GQ:DP        1|0:100:21      0|0:100:36      1|0:100:69
+9      103034092       .       C       G       .       PASS    AA=C;DP=127     GT:GQ:DP        1|0:100:21      0|0:100:38      1|0:100:64
+22     40255710        .       G       T       .       PASS    AA=T;DP=86      GT:GQ:DP        1|0:100:21      0|0:13:14       1|0:100:51
+18     56632523        .       C       T       .       PASS    AA=T;DP=68      GT:GQ:DP        1|0:100:21      0|0:15:15       1|0:100:20
+8      51505511        .       G       T       .       PASS    AA=G;DP=83      GT:GQ:DP        1|0:100:21      0|0:15:15       1|0:100:49
+4      32450994        rs61360398      T       C       .       PASS    AA=T;DP=107     GT:GQ:DP        1|0:100:21      0|0:15:9        1|0:100:62
+2      78234666        rs7586393       C       T       .       PASS    AA=C;DP=78      GT:GQ:DP        1|0:100:21      0|0:27:17       1|0:100:39
+21     42913155        rs933158        G       A       .       PASS    AA=G;DP=107     GT:GQ:DP        1|0:100:21      0|0:29:10       1|0:100:72
+9      78306010        rs12553343      G       C       .       PASS    AA=G;DP=99      GT:GQ:DP        1|0:100:21      0|0:31:14       1|0:100:65
+13     91835331        .       A       T       .       PASS    AA=A;DP=89      GT:GQ:DP        1|0:100:21      0|0:32:10       1|0:100:57
+7      45634000        rs1467270       A       C       .       PASS    AA=A;DP=95      GT:GQ:DP        1|0:100:21      0|0:32:10       1|0:100:65
+5      23937539        .       G       A       .       PASS    AA=g;DP=93      GT:GQ:DP        1|0:100:21      0|0:32:15       1|0:100:57
+3      82980791        rs12107385      T       G       .       PASS    AA=T;DP=101     GT:GQ:DP        1|0:100:21      0|0:32:21       1|0:100:61
+17     10062874        rs7208611       A       G       .       PASS    AA=A;DP=88      GT:GQ:DP        1|0:100:21      0|0:33:21       1|0:100:48
+2      103800916       rs17029176      T       C       .       PASS    AA=T;DP=88      GT:GQ:DP        1|0:100:21      0|0:35:11       1|0:100:54
+17     10483528        rs2285473       T       C       .       PASS    AA=C;DP=135     GT:GQ:DP        1|0:100:21      0|0:37:20       1|0:100:96
+10     2987932 rs56749704      C       T       .       PASS    AA=C;DP=80      GT:GQ:DP        1|0:100:21      0|0:38:14       1|0:100:45
+7      69076981        rs34617709      C       T       .       PASS    AA=T;DP=98      GT:GQ:DP        1|0:100:21      0|0:38:14       1|0:100:59
+15     31542670        rs2676095       T       A       .       PASS    AA=T;DP=99      GT:GQ:DP        1|0:100:21      0|0:40:27       1|0:100:42
+15     35226527        rs2681320       T       A       .       PASS    AA=T;DP=82      GT:GQ:DP        1|0:100:21      0|0:41:13       1|0:100:34
+2      34279334        rs13431362      T       C       .       PASS    AA=T;DP=70      GT:GQ:DP        1|0:100:21      0|0:41:13       1|0:100:34
+4      54263537        .       G       A       .       PASS    AA=G;DP=103     GT:GQ:DP        1|0:100:21      0|0:41:13       1|0:100:69
+4      151366690       rs966120        C       T       .       PASS    AA=T;DP=88      GT:GQ:DP        1|0:100:21      0|0:41:14       1|0:100:53
+4      28483101        rs11727526      C       A       .       PASS    AA=C;DP=91      GT:GQ:DP        1|0:100:21      0|0:41:19       1|0:100:52
+X      2276696 .       A       G       .       PASS    AA=a;DP=68      GT:GQ:DP        1|0:100:21      0|0:42:21       1|0:100:24
+6      78932286        .       G       T       .       PASS    AA=T;DP=90      GT:GQ:DP        1|0:100:21      0|0:42:21       1|0:100:48
+1      70789603        rs4274012       A       C       .       PASS    AA=A;DP=78      GT:GQ:DP        1|0:100:21      0|0:44:14       1|0:100:44
+6      95558193        rs60013620      T       C       .       PASS    AA=T;DP=80      GT:GQ:DP        1|0:100:21      0|0:44:15       1|0:100:45
+9      115056090       rs10981704      C       G       .       PASS    AA=C;DP=90      GT:GQ:DP        1|0:100:21      0|0:44:15       1|0:100:55
+9      36248630        .       T       A       .       PASS    AA=T;DP=95      GT:GQ:DP        1|0:100:21      0|0:44:15       1|0:100:59
+9      136785867       rs11103501      A       G       .       PASS    AA=G;DP=89      GT:GQ:DP        1|0:100:21      0|0:44:16       1|0:100:53
+14     73596943        rs8204  A       G       .       PASS    AA=A;DP=130     GT:GQ:DP        1|0:100:21      0|0:44:22       1|0:100:84
+12     55033681        .       C       A       .       PASS    AA=c;DP=93      GT:GQ:DP        1|0:100:21      0|0:47:15       1|0:100:57
+3      76111267        rs61201780      T       C       .       PASS    AA=T;DP=96      GT:GQ:DP        1|0:100:21      0|0:47:15       1|0:100:59
+15     62467444        rs16947927      C       A       .       PASS    AA=C;DP=100     GT:GQ:DP        1|0:100:21      0|0:47:15       1|0:100:62
+3      473640  .       C       G       .       PASS    AA=C;DP=80      GT:GQ:DP        1|0:100:21      0|0:47:16       1|0:100:43
+1      246574779       rs60801031      A       G       .       PASS    AA=.;DP=82      GT:GQ:DP        1|0:100:21      0|0:47:16       1|0:100:48
+10     76959339        rs60863650      G       A       .       PASS    AA=G;DP=92      GT:GQ:DP        1|0:100:21      0|0:47:16       1|0:100:56
+5      146538536       .       A       G       .       PASS    AA=A;DP=98      GT:GQ:DP        1|0:100:21      0|0:47:16       1|0:100:62
+18     2374040 rs12963476      G       A       .       PASS    AA=G;DP=99      GT:GQ:DP        1|0:100:21      0|0:47:16       1|0:100:63
+3      164946453       rs866942        C       T       .       PASS    AA=C;DP=118     GT:GQ:DP        1|0:100:21      0|0:47:18       1|0:100:82
+16     58323162        .       A       G       .       PASS    AA=A;DP=117     GT:GQ:DP        1|0:100:21      0|0:47:25       1|0:100:72
+1      148216555       .       C       A       .       PASS    AA=C;DP=105     GT:GQ:DP        1|0:100:21      0|0:49:23       1|0:100:59
+2      138392884       rs1824045       A       T       .       PASS    AA=A;DP=79      GT:GQ:DP        1|0:100:21      0|0:50:16       1|0:100:42
+20     20846101        rs59969774      A       C       .       PASS    AA=A;DP=97      GT:GQ:DP        1|0:100:21      0|0:50:16       1|0:100:63
+9      78484629        rs4744802       C       G       .       PASS    AA=C;DP=80      GT:GQ:DP        1|0:100:21      0|0:50:17       1|0:100:44
+5      91226824        rs10474379      G       A       .       PASS    AA=G;DP=95      GT:GQ:DP        1|0:100:21      0|0:50:17       1|0:100:57
+14     104227988       rs12147791      G       A       .       PASS    AA=g;DP=116     GT:GQ:DP        1|0:100:21      0|0:50:17       1|0:100:78
+2      214820978       .       C       T       .       PASS    AA=C;DP=117     GT:GQ:DP        1|0:100:21      0|0:50:17       1|0:100:81
+8      85353531        rs59138295      G       C       .       PASS    AA=C;DP=118     GT:GQ:DP        1|0:100:21      0|0:50:20       1|0:100:81
+9      26005642        rs28591579      T       C       .       PASS    AA=T;DP=113     GT:GQ:DP        1|0:100:21      0|0:51:21       1|0:100:71
+9      24765471        rs7036834       A       G       .       PASS    AA=G;DP=119     GT:GQ:DP        1|0:100:21      0|0:51:24       1|0:100:73
+16     62339670        .       C       T       .       PASS    AA=C;DP=124     GT:GQ:DP        1|0:100:21      0|0:52:32       1|0:100:73
+4      99374803        .       A       G       .       PASS    AA=A;DP=79      GT:GQ:DP        1|0:100:21      0|0:53:17       1|0:100:41
+20     16916836        rs7271862       A       G       .       PASS    AA=A;DP=99      GT:GQ:DP        1|0:100:21      0|0:53:17       1|0:100:47
+1      219843384       .       A       G       .       PASS    AA=A;DP=96      GT:GQ:DP        1|0:100:21      0|0:53:17       1|0:100:59
+10     3167817 rs2306316       G       A       .       PASS    AA=.;DP=97      GT:GQ:DP        1|0:100:21      0|0:53:17       1|0:100:61
+3      64951897        rs2678314       G       A       .       PASS    AA=A;DP=97      GT:GQ:DP        1|0:100:21      0|0:53:17       1|0:100:61
+4      18099505        rs931837        T       C       .       PASS    AA=t;DP=98      GT:GQ:DP        1|0:100:21      0|0:53:17       1|0:100:61
+7      14969783        rs59827390      A       G       .       PASS    AA=A;DP=120     GT:GQ:DP        1|0:100:21      0|0:53:17       1|0:100:81
+7      151302016       rs6958581       G       A       .       PASS    AA=A;DP=123     GT:GQ:DP        1|0:100:21      0|0:53:17       1|0:100:85
+14     80273149        .       G       A       .       PASS    AA=G;DP=84      GT:GQ:DP        1|0:100:21      0|0:53:18       1|0:100:32
+2      210273905       .       A       T       .       PASS    AA=A;DP=83      GT:GQ:DP        1|0:100:21      0|0:53:18       1|0:100:42
+14     89253575        .       A       T       .       PASS    AA=A;DP=87      GT:GQ:DP        1|0:100:21      0|0:53:18       1|0:100:50
+5      5923945 .       A       G       .       PASS    AA=A;DP=94      GT:GQ:DP        1|0:100:21      0|0:53:18       1|0:100:55
+3      189434167       .       T       C       .       PASS    AA=T;DP=114     GT:GQ:DP        1|0:100:21      0|0:53:18       1|0:100:73
+17     54260787        .       A       G       .       PASS    AA=A;DP=115     GT:GQ:DP        1|0:100:21      0|0:53:18       1|0:100:76
+7      12940108        rs34062 T       A       .       PASS    AA=T;DP=89      GT:GQ:DP        1|0:100:21      0|0:53:18       1|0:63:24
+1      157500271       rs4255380       A       G       .       PASS    AA=A;DP=73      GT:GQ:DP        1|0:100:21      0|0:56:18       1|0:100:26
+1      192129281       rs525696        T       C       .       PASS    AA=C;DP=91;HM2;HM3      GT:GQ:DP        1|0:100:21      0|0:56:18       1|0:100:49
+4      150299397       rs1438774       G       T       .       PASS    AA=G;DP=88      GT:GQ:DP        1|0:100:21      0|0:56:18       1|0:100:49
+4      95603223        .       C       T       .       PASS    AA=T;DP=94      GT:GQ:DP        1|0:100:21      0|0:56:18       1|0:100:53
+22     27783193        rs12321 G       C       .       PASS    AA=G;DP=95      GT:GQ:DP        1|0:100:21      0|0:56:18       1|0:100:56
+13     81210063        rs9545844       A       C       .       PASS    AA=C;DP=96      GT:GQ:DP        1|0:100:21      0|0:56:18       1|0:100:57
+9      28211934        rs10511826      A       G       .       PASS    AA=A;DP=97      GT:GQ:DP        1|0:100:21      0|0:56:18       1|0:100:57
+2      212163733       .       T       C       .       PASS    AA=T;DP=102     GT:GQ:DP        1|0:100:21      0|0:56:18       1|0:100:63
+12     33881234        .       G       A       .       PASS    AA=G;DP=107     GT:GQ:DP        1|0:100:21      0|0:56:18       1|0:100:67
+7      32494525        .       C       T       .       PASS    AA=C;DP=91      GT:GQ:DP        1|0:100:21      0|0:56:19       1|0:100:52
+4      167709762       .       C       A       .       PASS    AA=C;DP=96      GT:GQ:DP        1|0:100:21      0|0:56:19       1|0:100:57
+7      7079003 rs10247097      G       T       .       PASS    AA=t;DP=110     GT:GQ:DP        1|0:100:21      0|0:56:19       1|0:100:72
+4      45805957        rs11943042      G       C       .       PASS    AA=G;DP=100     GT:GQ:DP        1|0:100:21      0|0:56:20       1|0:100:56
+2      125263734       rs12465657      A       C       .       PASS    AA=A;DP=97      GT:GQ:DP        1|0:100:21      0|0:56:25       1|0:100:48
+9      80674575        rs12339232      T       A       .       PASS    AA=T;DP=138     GT:GQ:DP        1|0:100:21      0|0:56:26       1|0:100:92
+7      123883965       .       T       C       .       PASS    AA=C;DP=100     GT:GQ:DP        1|0:100:21      0|0:57:26       1|0:100:37
+1      74927687        rs549607        T       G       .       PASS    AA=T;DP=81      GT:GQ:DP        1|0:100:21      0|0:59:19       1|0:100:28
+13     96531273        rs7319368       T       C       .       PASS    AA=T;DP=88      GT:GQ:DP        1|0:100:21      0|0:59:19       1|0:100:36
+6      132449894       rs2223260       G       A       .       PASS    AA=G;DP=109     GT:GQ:DP        1|0:100:21      0|0:59:19       1|0:100:69
+7      52962827        rs10238144      T       A       .       PASS    AA=T;DP=113     GT:GQ:DP        1|0:100:21      0|0:59:19       1|0:100:73
+6      32701063        rs9271696       T       C       .       PASS    AA=T;DP=118     GT:GQ:DP        1|0:100:21      0|0:59:19       1|0:100:78
+1      187301399       rs12122990      C       T       .       PASS    AA=C;DP=88;HM2;HM3      GT:GQ:DP        1|0:100:21      0|0:59:20       1|0:100:37
+4      155687339       .       T       C       .       PASS    AA=T;DP=102     GT:GQ:DP        1|0:100:21      0|0:59:20       1|0:100:61
+3      1813475 .       T       A       .       PASS    AA=T;DP=97      GT:GQ:DP        1|0:100:21      0|0:60:27       1|0:100:46
+3      198427427       rs28524078      T       C       .       PASS    AA=T;DP=66      GT:GQ:DP        1|0:100:21      0|0:62:20       1|0:100:15
+7      118140809       .       C       A       .       PASS    AA=A;DP=76      GT:GQ:DP        1|0:100:21      0|0:62:20       1|0:100:29
+12     123111454       .       G       A       .       PASS    AA=G;DP=103     GT:GQ:DP        1|0:100:21      0|0:62:20       1|0:100:59
+7      18904606        rs13438248      A       G       .       PASS    AA=G;DP=101     GT:GQ:DP        1|0:100:21      0|0:62:20       1|0:100:60
+3      150816237       rs7610908       G       A       .       PASS    AA=G;DP=106     GT:GQ:DP        1|0:100:21      0|0:62:20       1|0:100:64
+8      128118195       rs57135351      A       G       .       PASS    AA=A;DP=109     GT:GQ:DP        1|0:100:21      0|0:62:20       1|0:100:67
+3      3502227 .       T       A       .       PASS    AA=T;DP=113     GT:GQ:DP        1|0:100:21      0|0:62:20       1|0:100:68
+17     26574267        rs2905883       G       A       .       PASS    AA=G;DP=116     GT:GQ:DP        1|0:100:21      0|0:62:20       1|0:100:76
+2      39999238        .       T       C       .       PASS    AA=T;DP=105     GT:GQ:DP        1|0:100:21      0|0:62:21       1|0:100:62
+11     38916665        rs7932391       C       T       .       PASS    AA=T;DP=115     GT:GQ:DP        1|0:100:21      0|0:62:25       1|0:100:65
+10     120042659       rs60420080      A       T       .       PASS    AA=A;DP=99      GT:GQ:DP        1|0:100:21      0|0:62:26       1|0:100:51
+14     61877783        .       A       G       .       PASS    AA=A;DP=127     GT:GQ:DP        1|0:100:21      0|0:64:27       1|0:100:76
+6      63950783        rs9350764       G       T       .       PASS    AA=T;DP=71      GT:GQ:DP        1|0:100:21      0|0:65:21       1|0:100:18
+4      47476616        .       A       C       .       PASS    AA=A;DP=116     GT:GQ:DP        1|0:100:21      0|0:65:21       1|0:100:38
+7      13412775        rs2723420       G       A       .       PASS    AA=G;DP=85      GT:GQ:DP        1|0:100:21      0|0:65:21       1|0:100:38
+3      104066377       rs6441682       T       C       .       PASS    AA=T;DP=85      GT:GQ:DP        1|0:100:21      0|0:65:21       1|0:100:41
+4      188641559       .       C       T       .       PASS    AA=C;DP=88      GT:GQ:DP        1|0:100:21      0|0:65:21       1|0:100:46
+7      11308964        rs10267055      A       G       .       PASS    AA=G;DP=105     GT:GQ:DP        1|0:100:21      0|0:65:21       1|0:100:63
+3      34022881        rs9845173       G       T       .       PASS    AA=G;DP=120     GT:GQ:DP        1|0:100:21      0|0:65:21       1|0:100:75
+11     3724326 rs623109        T       C       .       PASS    AA=T;DP=113     GT:GQ:DP        1|0:100:21      0|0:65:22       1|0:100:29
+10     117764318       .       A       G       .       PASS    AA=A;DP=95      GT:GQ:DP        1|0:100:21      0|0:65:22       1|0:100:51
+18     13232748        .       A       G       .       PASS    AA=N;DP=97      GT:GQ:DP        1|0:100:21      0|0:65:22       1|0:100:52
+1      52002785        .       A       G       .       PASS    AA=A;DP=99      GT:GQ:DP        1|0:100:21      0|0:65:22       1|0:100:56
+1      61008667        rs56873001      G       A       .       PASS    AA=G;DP=104     GT:GQ:DP        1|0:100:21      0|0:65:22       1|0:100:62
+19     17275843        rs1544940       A       T       .       PASS    AA=A;DP=109     GT:GQ:DP        1|0:100:21      0|0:65:22       1|0:100:65
+13     106887665       rs56125085      G       C       .       PASS    AA=G;DP=101     GT:GQ:DP        1|0:100:21      0|0:65:23       1|0:100:55
+8      36325829        .       C       T       .       PASS    AA=C;DP=123     GT:GQ:DP        1|0:100:21      0|0:65:25       1|0:100:75
+11     7379122 .       A       G       .       PASS    AA=A;DP=81      GT:GQ:DP        1|0:100:21      0|0:68:22       1|0:100:33
+8      115308723       .       A       C       .       PASS    AA=A;DP=95      GT:GQ:DP        1|0:100:21      0|0:68:22       1|0:100:52
+8      71913791        rs13272692      C       A       .       PASS    AA=C;DP=97      GT:GQ:DP        1|0:100:21      0|0:68:22       1|0:100:54
+6      81536776        .       T       C       .       PASS    AA=T;DP=102     GT:GQ:DP        1|0:100:21      0|0:68:22       1|0:100:59
+3      85062563        rs9917774       A       T       .       PASS    AA=A;DP=112     GT:GQ:DP        1|0:100:21      0|0:68:22       1|0:100:69
+7      3717229 rs10266883      T       C       .       PASS    AA=t;DP=90      GT:GQ:DP        1|0:100:21      0|0:68:23       1|0:100:46
+8      40051250        rs57503829      G       C       .       PASS    AA=C;DP=95      GT:GQ:DP        1|0:100:21      0|0:68:23       1|0:100:53
+14     78472129        .       C       T       .       PASS    AA=C;DP=114     GT:GQ:DP        1|0:100:21      0|0:68:23       1|0:100:73
+15     99512491        rs61016136      C       G       .       PASS    AA=G;DP=113     GT:GQ:DP        1|0:100:21      0|0:68:24       1|0:100:68
+3      130894136       rs16862433      G       A       .       PASS    AA=G;DP=123     GT:GQ:DP        1|0:100:21      0|0:71:23       1|0:100:39
+8      114091710       .       T       C       .       PASS    AA=T;DP=91      GT:GQ:DP        1|0:100:21      0|0:71:23       1|0:100:46
+4      88884081        rs59988944      A       G       .       PASS    AA=A;DP=137     GT:GQ:DP        1|0:100:21      0|0:71:23       1|0:100:48
+7      83235269        .       C       T       .       PASS    AA=C;DP=97      GT:GQ:DP        1|0:100:21      0|0:71:23       1|0:100:53
+2      182671151       rs6748404       C       T       .       PASS    AA=T;DP=103     GT:GQ:DP        1|0:100:21      0|0:71:23       1|0:100:59
+13     81737722        rs61051139      C       T       .       PASS    AA=C;DP=102     GT:GQ:DP        1|0:100:21      0|0:71:23       1|0:100:60
+2      233273008       rs56113308      G       A       .       PASS    AA=G;DP=106     GT:GQ:DP        1|0:100:21      0|0:71:23       1|0:100:65
+6      50320008        .       T       C       .       PASS    AA=t;DP=110     GT:GQ:DP        1|0:100:21      0|0:71:23       1|0:100:68
+7      38421741        .       G       A       .       PASS    AA=G;DP=122     GT:GQ:DP        1|0:100:21      0|0:71:23       1|0:100:77
+8      17735857        rs377813        G       C       .       PASS    AA=G;DP=128     GT:GQ:DP        1|0:100:21      0|0:74:24       1|0:100:41
+3      74570375        rs13072685      A       G       .       PASS    AA=A;DP=101     GT:GQ:DP        1|0:100:21      0|0:74:25       1|0:100:53
+6      48515818        rs1582093       A       G       .       PASS    AA=A;DP=102     GT:GQ:DP        1|0:100:21      0|0:74:25       1|0:100:57
+4      132175153       rs10029259      T       G       .       PASS    AA=T;DP=93      GT:GQ:DP        1|0:100:21      0|0:77:25       1|0:100:47
+5      38130628        rs2453338       A       T       .       PASS    AA=A;DP=98      GT:GQ:DP        1|0:100:21      0|0:77:25       1|0:100:51
+10     126701681       rs7086797       C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        1|0:100:21      0|0:77:25       1|0:100:61
+5      18253375        .       C       A       .       PASS    AA=C;DP=110     GT:GQ:DP        1|0:100:21      0|0:77:25       1|0:100:65
+10     1230519 rs7081523       C       T       .       PASS    AA=C;DP=122     GT:GQ:DP        1|0:100:21      0|0:77:25       1|0:100:75
+6      14071235        .       T       C       .       PASS    AA=T;DP=102     GT:GQ:DP        1|0:100:21      0|0:77:26       1|0:100:58
+2      78868081        .       T       A       .       PASS    AA=T;DP=113     GT:GQ:DP        1|0:100:21      0|0:77:27       1|0:100:64
+2      49722075        .       G       C       .       PASS    AA=C;DP=125     GT:GQ:DP        1|0:100:21      0|0:77:27       1|0:100:75
+20     36098550        rs62203564      G       A       .       PASS    AA=G;DP=127     GT:GQ:DP        1|0:100:21      0|0:77:27       1|0:100:80
+8      13369819        rs11781856      T       G       .       PASS    AA=T;DP=101     GT:GQ:DP        1|0:100:21      0|0:80:26       1|0:100:52
+12     3494769 rs56718697      A       G       .       PASS    AA=A;DP=123     GT:GQ:DP        1|0:100:21      0|0:80:26       1|0:100:74
+4      142284981       rs2636767       A       G       .       PASS    AA=A;DP=123     GT:GQ:DP        1|0:100:21      0|0:80:26       1|0:100:77
+1      51431605        .       A       G       .       PASS    AA=A;DP=127     GT:GQ:DP        1|0:100:21      0|0:80:26       1|0:100:82
+9      87988052        .       T       C       .       PASS    AA=T;DP=105     GT:GQ:DP        1|0:100:21      0|0:83:27       1|0:100:57
+6      130366523       .       G       A       .       PASS    AA=A;DP=119     GT:GQ:DP        1|0:100:21      0|0:83:27       1|0:100:61
+12     130572889       rs11061595      A       G       .       PASS    AA=A;DP=113     GT:GQ:DP        1|0:100:21      0|0:83:27       1|0:100:62
+6      147966752       rs17077062      G       A       .       PASS    AA=G;DP=114     GT:GQ:DP        1|0:100:21      0|0:83:27       1|0:100:66
+5      91569804        .       C       T       .       PASS    AA=T;DP=111     GT:GQ:DP        1|0:100:21      0|0:83:28       1|0:100:60
+2      205830221       rs16837126      C       G       .       PASS    AA=C;DP=114     GT:GQ:DP        1|0:100:21      0|0:83:28       1|0:100:67
+5      149299017       .       C       T       .       PASS    AA=C;DP=144     GT:GQ:DP        1|0:100:21      0|0:86:28       1|0:100:44
+13     46861147        rs1578303       C       T       .       PASS    AA=C;DP=107     GT:GQ:DP        1|0:100:21      0|0:86:28       1|0:100:60
+21     40764667        .       T       C       .       PASS    AA=T;DP=113     GT:GQ:DP        1|0:100:21      0|0:86:28       1|0:100:65
+11     131864023       .       C       T       .       PASS    AA=C;DP=101     GT:GQ:DP        1|0:100:21      0|0:86:29       1|0:100:52
+17     64240027        .       G       C       .       PASS    AA=G;DP=102     GT:GQ:DP        1|0:100:21      0|0:86:29       1|0:100:52
+21     28756991        rs2831832       G       A       .       PASS    AA=g;DP=112     GT:GQ:DP        1|0:100:21      0|0:86:30       1|0:100:59
+15     98220655        .       C       T       .       PASS    AA=.;DP=106     GT:GQ:DP        1|0:100:21      0|0:89:29       1|0:100:44
+1      104693848       .       G       A       .       PASS    AA=G;DP=105     GT:GQ:DP        1|0:100:21      0|0:89:29       1|0:100:54
+17     54792794        .       G       T       .       PASS    AA=G;DP=118     GT:GQ:DP        1|0:100:21      0|0:89:29       1|0:100:69
+1      44608420        rs11576254      C       T       .       PASS    AA=C;DP=129     GT:GQ:DP        1|0:100:21      0|0:89:30       1|0:100:81
+2      4012974 rs12477080      C       T       .       PASS    AA=C;DP=129     GT:GQ:DP        1|0:100:21      0|0:89:32       1|0:100:77
+20     47612517        rs8125371       T       C       .       PASS    AA=T;DP=100     GT:GQ:DP        1|0:100:21      0|0:8:13        1|0:100:66
+7      112613881       rs55837751      C       G       .       PASS    AA=c;DP=58      GT:GQ:DP        1|0:100:21      0|0:8:8 1|0:45:24
+11     69784990        .       G       A       .       PASS    AA=G;DP=134     GT:GQ:DP        1|0:100:21      0|0:94:34       1|0:100:37
+6      98028905        rs200810        T       C       .       PASS    AA=C;DP=110     GT:GQ:DP        1|0:100:21      0|0:98:33       1|0:100:57
+7      78569216        rs11489636      C       T       .       PASS    AA=C;DP=75      GT:GQ:DP        1|0:100:21      1|0:100:14      1|1:100:40
+6      49141291        rs4145251       G       A       .       PASS    AA=g;DP=86      GT:GQ:DP        1|0:100:21      1|0:100:14      1|1:100:51
+13     112065067       rs1330551       T       C       .       PASS    AA=T;DP=64      GT:GQ:DP        1|0:100:21      1|0:100:14      1|1:57:20
+11     11278395        rs4375432       T       C       .       PASS    AA=C;DP=87      GT:GQ:DP        1|0:100:21      1|0:100:17      1|1:100:49
+14     61189746        rs710046        A       G       .       PASS    AA=a;DP=102     GT:GQ:DP        1|0:100:21      1|0:100:17      1|1:100:64
+3      149351312       .       T       C       .       PASS    AA=T;DP=102     GT:GQ:DP        1|0:100:21      1|0:100:17      1|1:100:66
+2      55362275        rs12617316      G       A       .       PASS    AA=A;DP=82      GT:GQ:DP        1|0:100:21      1|0:100:17      1|1:94:44
+2      153832659       rs1821980       C       G       .       PASS    AA=C;DP=105     GT:GQ:DP        1|0:100:21      1|0:100:18      1|1:100:65
+20     58363202        rs61559981      G       T       .       PASS    AA=G;DP=81      GT:GQ:DP        1|0:100:21      1|0:100:19      1|1:100:43
+18     64962752        rs7236810       A       G       .       PASS    AA=A;DP=90      GT:GQ:DP        1|0:100:21      1|0:100:19      1|1:100:49
+7      76159307        .       G       A       .       PASS    AA=G;DP=92      GT:GQ:DP        1|0:100:21      1|0:100:20      1|1:100:44
+2      196353036       rs1145935       C       T       .       PASS    AA=T;DP=87      GT:GQ:DP        1|0:100:21      1|0:100:20      1|1:100:46
+1      99159031        rs12567897      G       A       .       PASS    AA=G;DP=93      GT:GQ:DP        1|0:100:21      1|0:100:20      1|1:100:51
+3      36669416        .       T       A       .       PASS    AA=T;DP=125     GT:GQ:DP        1|0:100:21      1|0:100:20      1|1:100:82
+6      165106653       rs4579332       C       G       .       PASS    AA=C;DP=100     GT:GQ:DP        1|0:100:21      1|0:100:21      1|1:100:55
+2      208594926       rs11891759      T       C       .       PASS    AA=T;DP=84      GT:GQ:DP        1|0:100:21      1|0:100:21      1|1:99:34
+18     68776416        rs4268837       T       A       .       PASS    AA=A;DP=105     GT:GQ:DP        1|0:100:21      1|0:100:22      1|1:100:65
+8      55953369        rs6994175       T       A       .       PASS    AA=T;DP=93      GT:GQ:DP        1|0:100:21      1|0:100:23      1|1:88:51
+7      83386342        rs10232617      G       A       .       PASS    AA=G;DP=93      GT:GQ:DP        1|0:100:21      1|0:100:24      1|1:100:38
+8      16527498        rs1719420       C       G       .       PASS    AA=G;DP=88      GT:GQ:DP        1|0:100:21      1|0:100:24      1|1:100:41
+4      97696296        rs10012417      G       C       .       PASS    AA=C;DP=93      GT:GQ:DP        1|0:100:21      1|0:100:24      1|1:100:44
+19     55978797        rs57028658      G       A       .       PASS    AA=g;DP=102     GT:GQ:DP        1|0:100:21      1|0:100:24      1|1:100:58
+7      67941804        .       G       C       .       PASS    AA=T;DP=109     GT:GQ:DP        1|0:100:21      1|0:100:24      1|1:100:63
+6      159147756       rs3123129       T       C       .       PASS    AA=T;DP=112     GT:GQ:DP        1|0:100:21      1|0:100:24      1|1:100:71
+5      23648614        rs1589419       T       C       .       PASS    AA=t;DP=97      GT:GQ:DP        1|0:100:21      1|0:100:24      1|1:29:48
+1      238022299       rs693948        T       C       .       PASS    AA=C;DP=90;HM2;HM3      GT:GQ:DP        1|0:100:21      1|0:100:24      1|1:97:46
+7      3327282 rs4311565       T       C       .       PASS    AA=T;DP=96      GT:GQ:DP        1|0:100:21      1|0:100:25      1|1:100:51
+3      95498500        rs1598226       A       G       .       PASS    AA=G;DP=109     GT:GQ:DP        1|0:100:21      1|0:100:25      1|1:100:62
+2      228950567       .       C       T       .       PASS    AA=C;DP=124     GT:GQ:DP        1|0:100:21      1|0:100:25      1|1:100:76
+1      244724229       rs7517207       A       G       .       PASS    AA=a;DP=130;HM2;HM3     GT:GQ:DP        1|0:100:21      1|0:100:25      1|1:100:86
+4      127474897       rs11938961      T       C       .       PASS    AA=C;DP=111     GT:GQ:DP        1|0:100:21      1|0:100:26      1|1:100:64
+3      159450933       rs1095635       C       A       .       PASS    AA=C;DP=115     GT:GQ:DP        1|0:100:21      1|0:100:28      1|1:100:66
+4      138244693       rs28818309      T       C       .       PASS    AA=T;DP=113     GT:GQ:DP        1|0:100:21      1|0:100:30      1|1:100:61
+8      41386501        rs2354563       T       C       .       PASS    AA=C;DP=100     GT:GQ:DP        1|0:100:21      1|0:100:32      1|1:100:48
+2      225720122       rs61333102      A       G       .       PASS    AA=A;DP=112     GT:GQ:DP        1|0:100:21      1|0:100:32      1|1:100:61
+17     36878532        rs9895886       C       T       .       PASS    AA=C;DP=129     GT:GQ:DP        1|0:100:21      1|0:100:33      1|1:100:76
+3      190578684       rs13065691      G       T       .       PASS    AA=g;DP=68      GT:GQ:DP        1|0:100:21      1|0:20:11       1|1:20:24
+19     37726538        rs11084655      A       G       .       PASS    AA=a;DP=71      GT:GQ:DP        1|0:100:21      1|0:28:8        1|1:100:42
+14     39729434        rs1950231       T       C       .       PASS    AA=T;DP=73      GT:GQ:DP        1|0:100:21      1|0:37:10       1|1:93:32
+5      173840896       .       G       A       .       PASS    AA=G;DP=99      GT:GQ:DP        1|0:100:21      1|0:42:23       1|1:100:57
+10     59410043        rs1017121       T       C       .       PASS    AA=C;DP=101     GT:GQ:DP        1|0:100:21      1|0:67:19       1|1:100:65
+8      66440693        rs10087366      G       A       .       PASS    AA=A;DP=108     GT:GQ:DP        1|0:100:21      1|0:71:23       1|1:100:62
+8      125486437       .       C       T       .       PASS    AA=C;DP=114     GT:GQ:DP        1|0:100:21      1|0:71:23       1|1:100:71
+10     19170444        rs4748533       A       G       .       PASS    AA=A;DP=98      GT:GQ:DP        1|0:100:21      1|0:76:15       1|1:100:66
+7      82789982        rs10228277      C       A       .       PASS    AA=C;DP=87      GT:GQ:DP        1|0:100:21      1|0:80:13       1|1:100:55
+14     82549376        rs1263478       C       T       .       PASS    AA=c;DP=76      GT:GQ:DP        1|0:100:21      1|0:80:24       1|1:78:27
+1      74445929        rs520806        C       T       .       PASS    AA=T;DP=95;HM2;HM3      GT:GQ:DP        1|0:100:21      1|0:83:21       1|1:100:39
+6      141296723       rs9321790       A       G       .       PASS    AA=a;DP=89      GT:GQ:DP        1|0:100:21      1|0:85:17       1|1:57:50
+13     71217096        rs1981738       A       C       .       PASS    AA=T;DP=95      GT:GQ:DP        1|0:100:21      1|0:89:18       1|1:100:58
+2      228354462       rs4399717       C       T       .       PASS    AA=T;DP=92      GT:GQ:DP        1|0:100:21      1|0:8:8 1|1:100:55
+19     58688579        rs2708841       T       C       .       PASS    AA=N;DP=67      GT:GQ:DP        1|0:100:21      1|0:91:9        1|1:70:37
+9      30221619        rs10511848      T       C       .       PASS    AA=T;DP=96      GT:GQ:DP        1|0:100:21      1|0:96:17       1|1:100:58
+7      131035353       .       A       G       .       PASS    AA=A;DP=112     GT:GQ:DP        1|0:100:21      1|0:96:19       1|1:100:72
+2      5481515 rs700954        G       T       .       PASS    AA=A;DP=92      GT:GQ:DP        1|0:100:21      1|0:98:15       1|1:100:55
+20     23372886        rs6083127       T       C       .       PASS    AA=C;DP=81      GT:GQ:DP        1|0:100:21      1|1:16:15       1|1:100:35
+10     31285512        rs3011602       C       G       .       PASS    AA=G;DP=90      GT:GQ:DP        1|0:100:21      1|1:16:16       1|1:100:53
+2      183256826       rs7588247       T       A       .       PASS    AA=T;DP=106     GT:GQ:DP        1|0:100:21      1|1:23:27       1|1:89:59
+15     32404867        rs9972323       C       A       .       PASS    AA=A;DP=78      GT:GQ:DP        1|0:100:21      1|1:27:20       1|1:80:38
+6      54167274        rs1292569       C       A       .       PASS    AA=a;DP=92      GT:GQ:DP        1|0:100:21      1|1:29:19       1|1:100:49
+19     55470355        rs788338        T       C       .       PASS    AA=C;DP=109     GT:GQ:DP        1|0:100:21      1|1:30:10       1|1:100:79
+1      214756472       rs4846279       T       A       .       PASS    AA=A;DP=69      GT:GQ:DP        1|0:100:21      1|1:30:10       1|1:66:38
+12     17534583        rs1694788       G       A       .       PASS    AA=A;DP=83      GT:GQ:DP        1|0:100:21      1|1:30:11       1|1:100:50
+3      13570026        rs9883693       G       T       .       PASS    AA=T;DP=93      GT:GQ:DP        1|0:100:21      1|1:33:16       1|1:100:56
+6      162801516       rs2223192       A       C       .       PASS    AA=C;DP=74      GT:GQ:DP        1|0:100:21      1|1:33:22       1|1:75:25
+9      71850921        rs3015232       T       C       .       PASS    AA=C;DP=85      GT:GQ:DP        1|0:100:21      1|1:36:12       1|1:100:42
+9      126137834       rs927611        G       C       .       PASS    AA=C;DP=103     GT:GQ:DP        1|0:100:21      1|1:36:12       1|1:100:69
+11     98222927        rs1487096       T       C       .       PASS    AA=C;DP=69      GT:GQ:DP        1|0:100:21      1|1:39:13       1|1:75:35
+6      165838926       rs499253        C       T       .       PASS    AA=T;DP=70      GT:GQ:DP        1|0:100:21      1|1:39:14       1|1:72:36
+1      56062520        rs4558016       T       A       .       PASS    AA=A;DP=83;HM2  GT:GQ:DP        1|0:100:21      1|1:41:25       1|1:84:28
+8      2558001 rs13266317      A       T       .       PASS    AA=t;DP=93      GT:GQ:DP        1|0:100:21      1|1:42:14       1|1:100:53
+7      107019605       rs2107713       T       C       .       PASS    AA=T;DP=82      GT:GQ:DP        1|0:100:21      1|1:42:15       1|1:100:46
+10     8982138 rs7912340       G       T       .       PASS    AA=G;DP=84      GT:GQ:DP        1|0:100:21      1|1:42:20       1|1:78:40
+22     45792015        rs1005554       G       A       .       PASS    AA=g;DP=99      GT:GQ:DP        1|0:100:21      1|1:45:15       1|1:100:64
+4      27649323        rs6816505       T       C       .       PASS    AA=C;DP=118     GT:GQ:DP        1|0:100:21      1|1:45:16       1|1:100:40
+3      36169823        .       C       T       .       PASS    AA=T;DP=87      GT:GQ:DP        1|0:100:21      1|1:51:17       1|1:100:48
+2      154320729       .       C       T       .       PASS    AA=C;DP=88      GT:GQ:DP        1|0:100:21      1|1:51:18       1|1:100:47
+2      51106413        rs7604257       C       T       .       PASS    AA=T;DP=71      GT:GQ:DP        1|0:100:21      1|1:51:19       1|1:78:26
+15     25523778        rs1551868       C       G       .       PASS    AA=C;DP=111     GT:GQ:DP        1|0:100:21      1|1:51:27       1|1:100:65
+1      68494107        rs34669611      C       A       .       PASS    AA=C;DP=106     GT:GQ:DP        1|0:100:21      1|1:52:23       1|1:100:57
+14     64570488        rs8006419       A       G       .       PASS    AA=A;DP=117     GT:GQ:DP        1|0:100:21      1|1:54:18       1|1:100:76
+3      162567219       rs60625846      G       T       .       PASS    AA=G;DP=79      GT:GQ:DP        1|0:100:21      1|1:54:18       1|1:88:40
+6      96639963        rs6920907       A       G       .       PASS    AA=G;DP=84      GT:GQ:DP        1|0:100:21      1|1:54:19       1|1:100:36
+12     28171334        rs12316166      A       G       .       PASS    AA=G;DP=103     GT:GQ:DP        1|0:100:21      1|1:55:24       1|1:100:47
+2      240627212       rs4854053       T       G       .       PASS    AA=G;DP=96      GT:GQ:DP        1|0:100:21      1|1:57:19       1|1:100:59
+5      4558958 rs11747408      A       G       .       PASS    AA=G;DP=106     GT:GQ:DP        1|0:100:21      1|1:57:19       1|1:100:61
+15     96379298        rs59429270      C       T       .       PASS    AA=T;DP=103     GT:GQ:DP        1|0:100:21      1|1:57:19       1|1:100:63
+4      67289904        rs11947910      C       T       .       PASS    AA=C;DP=104     GT:GQ:DP        1|0:100:21      1|1:57:19       1|1:100:64
+2      158423688       rs4664902       C       T       .       PASS    AA=T;DP=107     GT:GQ:DP        1|0:100:21      1|1:57:19       1|1:100:74
+17     15126248        rs9944503       A       G       .       PASS    AA=G;DP=126     GT:GQ:DP        1|0:100:21      1|1:57:20       1|1:100:36
+6      113602646       rs1406831       C       A       .       PASS    AA=A;DP=89      GT:GQ:DP        1|0:100:21      1|1:57:20       1|1:86:46
+14     80107564        rs8013422       T       C       .       PASS    AA=T;DP=111     GT:GQ:DP        1|0:100:21      1|1:57:26       1|1:100:63
+14     47642382        rs2197465       G       T       .       PASS    AA=T;DP=109     GT:GQ:DP        1|0:100:21      1|1:60:20       1|1:100:65
+4      180704299       rs4591647       G       C       .       PASS    AA=G;DP=107     GT:GQ:DP        1|0:100:21      1|1:60:20       1|1:100:67
+6      65072996        rs9342212       T       C       .       PASS    AA=T;DP=101     GT:GQ:DP        1|0:100:21      1|1:60:21       1|1:100:39
+14     36907965        rs719135        T       C       .       PASS    AA=T;DP=91      GT:GQ:DP        1|0:100:21      1|1:63:21       1|1:100:48
+16     7560065 .       A       G       .       PASS    AA=A;DP=80      GT:GQ:DP        1|0:100:21      1|1:63:21       1|1:59:37
+6      101869258       rs501116        A       G       .       PASS    AA=a;DP=88      GT:GQ:DP        1|0:100:21      1|1:63:23       1|1:100:46
+6      74736477        rs3003184       T       C       .       PASS    AA=T;DP=112     GT:GQ:DP        1|0:100:21      1|1:63:28       1|1:100:65
+11     16353080        rs297334        G       A       .       PASS    AA=G;DP=74      GT:GQ:DP        1|0:100:21      1|1:66:22       1|1:75:25
+11     59890562        rs11230289      C       T       .       PASS    AA=T;DP=107     GT:GQ:DP        1|0:100:21      1|1:66:24       1|1:100:63
+3      3597611 rs9829721       C       T       .       PASS    AA=T;DP=90      GT:GQ:DP        1|0:100:21      1|1:69:23       1|1:100:46
+5      19896690        rs7726859       G       C       .       PASS    AA=G;DP=94      GT:GQ:DP        1|0:100:21      1|1:69:24       1|1:99:48
+3      107769970       rs2120873       C       T       .       PASS    AA=C;DP=93      GT:GQ:DP        1|0:100:21      1|1:72:25       1|1:100:47
+4      77286892        rs13127201      C       A       .       PASS    AA=A;DP=98      GT:GQ:DP        1|0:100:21      1|1:75:25       1|1:100:52
+3      76208861        rs7642285       A       G       .       PASS    AA=a;DP=98      GT:GQ:DP        1|0:100:21      1|1:75:26       1|1:100:51
+15     34683568        rs1377730       T       C       .       PASS    AA=C;DP=105     GT:GQ:DP        1|0:100:21      1|1:75:26       1|1:100:58
+3      3009374 rs973594        A       G       .       PASS    AA=A;DP=107     GT:GQ:DP        1|0:100:21      1|1:81:27       1|1:100:58
+14     39080626        rs1950322       T       A       .       PASS    AA=A;DP=96      GT:GQ:DP        1|0:100:21      1|1:81:28       1|1:100:49
+10     107198028       rs2169035       T       C       .       PASS    AA=T;DP=111     GT:GQ:DP        1|0:100:22      0|0:100:33      1|0:100:57
+8      32362711        rs7844353       G       A       .       PASS    AA=A;DP=148     GT:GQ:DP        1|0:100:22      0|0:100:33      1|0:100:94
+10     82462733        rs11186663      C       T       .       PASS    AA=C;DP=107     GT:GQ:DP        1|0:100:22      0|0:100:35      1|0:100:36
+4      55146873        rs57452905      T       C       .       PASS    AA=T;DP=129     GT:GQ:DP        1|0:100:22      0|0:100:35      1|0:100:72
+3      190506855       rs6785321       A       G       .       PASS    AA=A;DP=124     GT:GQ:DP        1|0:100:22      0|0:100:37      1|0:100:66
+11     7936294 rs1606068       T       C       .       PASS    AA=T;DP=128     GT:GQ:DP        1|0:100:22      0|0:100:42      1|0:100:61
+12     19428072        .       A       T       .       PASS    AA=A;DP=94      GT:GQ:DP        1|0:100:22      0|0:10:12       1|0:100:61
+11     61210766        rs4963307       A       G       .       PASS    AA=A;DP=113     GT:GQ:DP        1|0:100:22      0|0:11:13       1|0:100:80
+7      73404980        rs35857456      T       A       .       PASS    AA=-;DP=65      GT:GQ:DP        1|0:100:22      0|0:16:9        1|0:41:26
+13     84654947        rs9575808       T       C       .       PASS    AA=C;DP=82      GT:GQ:DP        1|0:100:22      0|0:20:6        1|0:100:54
+5      156260445       rs4704816       T       A       .       PASS    AA=A;DP=69      GT:GQ:DP        1|0:100:22      0|0:21:17       1|0:100:19
+4      141263943       .       C       T       .       PASS    AA=C;DP=70      GT:GQ:DP        1|0:100:22      0|0:21:17       1|0:100:25
+14     63855852        .       A       G       .       PASS    AA=A;DP=88      GT:GQ:DP        1|0:100:22      0|0:21:17       1|0:100:52
+4      65209299        .       G       C       .       PASS    AA=G;DP=71      GT:GQ:DP        1|0:100:22      0|0:23:8        1|0:100:39
+13     75518709        rs9318392       G       A       .       PASS    AA=G;DP=84      GT:GQ:DP        1|0:100:22      0|0:26:9        1|0:100:55
+13     69680508        .       C       G       .       PASS    AA=C;DP=81      GT:GQ:DP        1|0:100:22      0|0:29:10       1|0:100:47
+6      53432631        rs499653        C       T       .       PASS    AA=T;DP=117     GT:GQ:DP        1|0:100:22      0|0:29:12       1|0:100:43
+1      187797140       rs397402        A       T       .       PASS    AA=a;DP=92;HM2  GT:GQ:DP        1|0:100:22      0|0:29:9        1|0:100:62
+4      148190288       rs1437272       T       C       .       PASS    AA=T;DP=103     GT:GQ:DP        1|0:100:22      0|0:32:21       1|0:100:57
+22     47589360        rs9628491       A       G       .       PASS    AA=G;DP=120     GT:GQ:DP        1|0:100:22      0|0:32:21       1|0:100:79
+4      56037694        rs62303718      T       C       .       PASS    AA=T;DP=86      GT:GQ:DP        1|0:100:22      0|0:35:11       1|0:100:49
+8      120419348       rs1026594       G       T       .       PASS    AA=G;DP=91      GT:GQ:DP        1|0:100:22      0|0:35:12       1|0:100:57
+19     37189303        rs11882901      G       T       .       PASS    AA=G;DP=87      GT:GQ:DP        1|0:100:22      0|0:38:12       1|0:100:56
+10     119663417       .       T       C       .       PASS    AA=T;DP=91      GT:GQ:DP        1|0:100:22      0|0:38:12       1|0:100:59
+10     21925585        .       T       A       .       PASS    AA=t;DP=73      GT:GQ:DP        1|0:100:22      0|0:38:13       1|0:100:38
+18     74517696        rs12960227      G       A       .       PASS    AA=G;DP=93      GT:GQ:DP        1|0:100:22      0|0:38:13       1|0:100:58
+11     132094163       rs12281281      G       A       .       PASS    AA=G;DP=100     GT:GQ:DP        1|0:100:22      0|0:38:13       1|0:100:66
+5      73933675        rs59981395      C       T       .       PASS    AA=C;DP=101     GT:GQ:DP        1|0:100:22      0|0:38:13       1|0:100:66
+6      144494069       .       C       T       .       PASS    AA=C;DP=104     GT:GQ:DP        1|0:100:22      0|0:38:13       1|0:100:73
+7      88699991        .       C       T       .       PASS    AA=C;DP=97      GT:GQ:DP        1|0:100:22      0|0:38:17       1|0:100:58
+1      30094155        rs34527566      C       A       .       PASS    AA=C;DP=110     GT:GQ:DP        1|0:100:22      0|0:38:18       1|0:100:70
+19     36501695        rs4805677       A       C       .       PASS    AA=A;DP=114     GT:GQ:DP        1|0:100:22      0|0:39:24       1|0:100:66
+6      91197183        rs1376378       A       G       .       PASS    AA=A;DP=119     GT:GQ:DP        1|0:100:22      0|0:40:24       1|0:97:32
+6      122281875       rs9320845       G       T       .       PASS    AA=G;DP=119     GT:GQ:DP        1|0:100:22      0|0:41:13       1|0:100:30
+12     74779958        .       G       A       .       PASS    AA=G;DP=98      GT:GQ:DP        1|0:100:22      0|0:41:13       1|0:100:45
+10     87076708        .       T       A       .       PASS    AA=T;DP=91      GT:GQ:DP        1|0:100:22      0|0:41:13       1|0:100:56
+9      90834376        rs9285047       G       A       .       PASS    AA=G;DP=92      GT:GQ:DP        1|0:100:22      0|0:41:14       1|0:100:57
+1      59816545        rs11805572      T       C       .       PASS    AA=T;DP=98;HM2  GT:GQ:DP        1|0:100:22      0|0:41:14       1|0:100:62
+8      64770619        .       T       C       .       PASS    AA=T;DP=67      GT:GQ:DP        1|0:100:22      0|0:41:15       1|0:100:30
+12     46805787        rs60612567      G       A       .       PASS    AA=G;DP=88      GT:GQ:DP        1|0:100:22      0|0:41:15       1|0:100:50
+1      187171593       .       G       A       .       PASS    AA=g;DP=111     GT:GQ:DP        1|0:100:22      0|0:41:15       1|0:100:72
+8      47413249        .       G       A       .       PASS    AA=.;DP=109     GT:GQ:DP        1|0:100:22      0|0:41:19       1|0:100:69
+18     24342622        .       C       A       .       PASS    AA=C;DP=105     GT:GQ:DP        1|0:100:22      0|0:43:25       1|0:100:58
+13     43715584        rs873530        G       A       .       PASS    AA=G;DP=110     GT:GQ:DP        1|0:100:22      0|0:43:25       1|0:100:60
+15     21280449        rs8033881       C       G       .       PASS    AA=c;DP=124     GT:GQ:DP        1|0:100:22      0|0:43:29       1|0:100:72
+6      101978711       .       A       G       .       PASS    AA=A;DP=67      GT:GQ:DP        1|0:100:22      0|0:44:14       1|0:100:20
+14     60036398        rs8010060       C       T       .       PASS    AA=C;DP=90      GT:GQ:DP        1|0:100:22      0|0:44:14       1|0:100:36
+9      38406145        rs7045947       A       G       .       PASS    AA=G;DP=73      GT:GQ:DP        1|0:100:22      0|0:44:14       1|0:100:40
+15     55595434        rs7183994       C       G       .       PASS    AA=G;DP=86      GT:GQ:DP        1|0:100:22      0|0:44:14       1|0:100:41
+2      70362673        rs7560553       C       T       .       PASS    AA=C;DP=82      GT:GQ:DP        1|0:100:22      0|0:44:14       1|0:100:46
+11     11243654        .       A       G       .       PASS    AA=A;DP=90      GT:GQ:DP        1|0:100:22      0|0:44:15       1|0:100:54
+7      17439068        .       T       C       .       PASS    AA=t;DP=112     GT:GQ:DP        1|0:100:22      0|0:44:15       1|0:100:61
+6      113237959       .       G       C       .       PASS    AA=G;DP=104     GT:GQ:DP        1|0:100:22      0|0:44:15       1|0:100:65
+12     73202451        .       G       A       .       PASS    AA=G;DP=102     GT:GQ:DP        1|0:100:22      0|0:44:15       1|0:100:68
+19     20331269        rs12462024      C       T       .       PASS    AA=-;DP=96      GT:GQ:DP        1|0:100:22      0|0:44:20       1|0:100:55
+17     55894289        rs7219325       G       T       .       PASS    AA=T;DP=97      GT:GQ:DP        1|0:100:22      0|0:45:24       1|0:100:51
+7      4499390 rs4723812       C       G       .       PASS    AA=C;DP=114     GT:GQ:DP        1|0:100:22      0|0:46:22       1|0:100:70
+7      51977210        rs12718567      G       A       .       PASS    AA=G;DP=89      GT:GQ:DP        1|0:100:22      0|0:47:15       1|0:100:44
+18     69342480        .       G       T       .       PASS    AA=G;DP=94      GT:GQ:DP        1|0:100:22      0|0:47:15       1|0:100:59
+3      155204747       .       T       A       .       PASS    AA=T;DP=117     GT:GQ:DP        1|0:100:22      0|0:47:15       1|0:100:75
+4      62416027        rs7654106       C       A       .       PASS    AA=C;DP=69      GT:GQ:DP        1|0:100:22      0|0:47:16       1|0:100:29
+9      36659877        .       A       G       .       PASS    AA=A;DP=78      GT:GQ:DP        1|0:100:22      0|0:47:16       1|0:100:29
+10     50363587        .       G       A       .       PASS    AA=G;DP=94      GT:GQ:DP        1|0:100:22      0|0:47:17       1|0:100:55
+9      8359713 rs10815840      A       T       .       PASS    AA=A;DP=79      GT:GQ:DP        1|0:100:22      0|0:50:16       1|0:100:42
+1      28606580        rs12091029      G       T       .       PASS    AA=T;DP=89;HM2;HM3      GT:GQ:DP        1|0:100:22      0|0:50:16       1|0:100:51
+7      54615347        rs59228555      A       T       .       PASS    AA=A;DP=95      GT:GQ:DP        1|0:100:22      0|0:50:16       1|0:100:57
+8      23254506        .       C       T       .       PASS    AA=C;DP=105     GT:GQ:DP        1|0:100:22      0|0:50:16       1|0:100:66
+6      124106303       .       G       A       .       PASS    AA=G;DP=114     GT:GQ:DP        1|0:100:22      0|0:50:16       1|0:100:74
+7      41597276        .       T       C       .       PASS    AA=T;DP=106     GT:GQ:DP        1|0:100:22      0|0:50:17       1|0:100:62
+10     127225740       .       C       A       .       PASS    AA=C;DP=102     GT:GQ:DP        1|0:100:22      0|0:50:17       1|0:100:63
+3      7976835 .       C       T       .       PASS    AA=T;DP=102     GT:GQ:DP        1|0:100:22      0|0:50:17       1|0:100:66
+6      54569642        rs13192762      C       T       .       PASS    AA=C;DP=108     GT:GQ:DP        1|0:100:22      0|0:50:17       1|0:100:69
+14     51637973        .       A       G       .       PASS    AA=A;DP=111     GT:GQ:DP        1|0:100:22      0|0:50:17       1|0:100:73
+6      164208942       rs6901859       G       A       .       PASS    AA=A;DP=114     GT:GQ:DP        1|0:100:22      0|0:51:22       1|0:100:71
+7      114645006       rs10258197      C       T       .       PASS    AA=C;DP=68      GT:GQ:DP        1|0:100:22      0|0:53:17       1|0:100:26
+4      83083840        rs60909247      A       C       .       PASS    AA=A;DP=88      GT:GQ:DP        1|0:100:22      0|0:53:17       1|0:100:47
+10     17797973        rs57797707      T       G       .       PASS    AA=T;DP=89      GT:GQ:DP        1|0:100:22      0|0:53:17       1|0:100:51
+3      159365  rs7619069       T       G       .       PASS    AA=T;DP=92      GT:GQ:DP        1|0:100:22      0|0:53:17       1|0:100:55
+5      73077958        rs11747023      T       C       .       PASS    AA=T;DP=93      GT:GQ:DP        1|0:100:22      0|0:53:17       1|0:100:55
+13     97020807        rs9584602       T       C       .       PASS    AA=C;DP=113     GT:GQ:DP        1|0:100:22      0|0:53:17       1|0:100:59
+3      147483032       .       G       A       .       PASS    AA=G;DP=82      GT:GQ:DP        1|0:100:22      0|0:53:18       1|0:100:42
+6      163554945       rs62429971      G       A       .       PASS    AA=G;DP=93      GT:GQ:DP        1|0:100:22      0|0:53:18       1|0:100:50
+4      81059197        rs12505128      G       C       .       PASS    AA=C;DP=90      GT:GQ:DP        1|0:100:22      0|0:53:18       1|0:100:51
+8      72550466        rs60607582      C       A       .       PASS    AA=C;DP=97      GT:GQ:DP        1|0:100:22      0|0:53:18       1|0:100:53
+6      38105328        rs11753388      C       T       .       PASS    AA=C;DP=111     GT:GQ:DP        1|0:100:22      0|0:53:18       1|0:100:61
+3      171434865       .       T       C       .       PASS    AA=T;DP=89      GT:GQ:DP        1|0:100:22      0|0:53:19       1|0:100:47
+12     73964847        .       G       A       .       PASS    AA=G;DP=104     GT:GQ:DP        1|0:100:22      0|0:53:19       1|0:100:58
+4      73887781        .       C       T       .       PASS    AA=C;DP=79      GT:GQ:DP        1|0:100:22      0|0:56:18       1|0:100:31
+10     72169434        rs7088582       C       T       .       PASS    AA=C;DP=98      GT:GQ:DP        1|0:100:22      0|0:56:18       1|0:100:46
+6      53970556        .       A       C       .       PASS    AA=A;DP=94      GT:GQ:DP        1|0:100:22      0|0:56:18       1|0:100:53
+12     23028350        rs12320053      A       C       .       PASS    AA=A;DP=98      GT:GQ:DP        1|0:100:22      0|0:56:18       1|0:100:55
+15     56643898        .       G       A       .       PASS    AA=G;DP=101     GT:GQ:DP        1|0:100:22      0|0:56:18       1|0:100:61
+7      91346773        rs2269810       T       C       .       PASS    AA=t;DP=103     GT:GQ:DP        1|0:100:22      0|0:56:18       1|0:100:61
+1      106480329       rs11590544      A       G       .       PASS    AA=A;DP=108;HM2;HM3     GT:GQ:DP        1|0:100:22      0|0:56:18       1|0:100:67
+2      6354481 .       C       T       .       PASS    AA=C;DP=112     GT:GQ:DP        1|0:100:22      0|0:56:18       1|0:100:70
+4      27960648        .       G       A       .       PASS    AA=N;DP=97      GT:GQ:DP        1|0:100:22      0|0:56:19       1|0:100:57
+2      139852014       rs16842200      C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        1|0:100:22      0|0:56:19       1|0:100:68
+6      115218080       rs6912259       T       A       .       PASS    AA=t;DP=91      GT:GQ:DP        1|0:100:22      0|0:57:30       1|0:100:40
+11     7529143 rs10839805      G       A       .       PASS    AA=G;DP=141     GT:GQ:DP        1|0:100:22      0|0:58:28       1|0:100:92
+2      31953814        rs34805211      A       T       .       PASS    AA=A;DP=68      GT:GQ:DP        1|0:100:22      0|0:59:19       1|0:100:20
+11     21748201        .       T       C       .       PASS    AA=T;DP=84      GT:GQ:DP        1|0:100:22      0|0:59:19       1|0:100:42
+1      237509367       rs2820047       A       T       .       PASS    AA=A;DP=87;HM2  GT:GQ:DP        1|0:100:22      0|0:59:19       1|0:100:45
+16     7304862 .       T       C       .       PASS    AA=T;DP=100     GT:GQ:DP        1|0:100:22      0|0:59:19       1|0:100:45
+2      11876715        rs57450916      A       G       .       PASS    AA=A;DP=90      GT:GQ:DP        1|0:100:22      0|0:59:19       1|0:100:51
+12     73471914        rs17114229      A       G       .       PASS    AA=A;DP=96      GT:GQ:DP        1|0:100:22      0|0:59:19       1|0:100:54
+1      239311196       rs59852263      C       T       .       PASS    AA=C;DP=98      GT:GQ:DP        1|0:100:22      0|0:59:19       1|0:100:55
+2      174153840       rs6715056       T       C       .       PASS    AA=T;DP=103     GT:GQ:DP        1|0:100:22      0|0:59:19       1|0:100:58
+4      155779202       .       C       T       .       PASS    AA=C;DP=105     GT:GQ:DP        1|0:100:22      0|0:59:19       1|0:100:63
+1      182045244       rs61349224      A       C       .       PASS    AA=G;DP=117     GT:GQ:DP        1|0:100:22      0|0:59:19       1|0:100:79
+2      80852909        rs12714017      T       C       .       PASS    AA=T;DP=93      GT:GQ:DP        1|0:100:22      0|0:59:20       1|0:100:52
+4      81725349        .       G       A       .       PASS    AA=G;DP=119     GT:GQ:DP        1|0:100:22      0|0:59:21       1|0:100:60
+2      23012   rs13423995      A       G       .       PASS    AA=.;DP=112     GT:GQ:DP        1|0:100:22      0|0:59:22       1|0:100:68
+3      59416278        rs12496711      A       T       .       PASS    AA=T;DP=115     GT:GQ:DP        1|0:100:22      0|0:60:25       1|0:100:70
+6      48869186        rs2495874       T       C       .       PASS    AA=T;DP=125     GT:GQ:DP        1|0:100:22      0|0:60:25       1|0:100:79
+10     19743431        rs7068177       A       G       .       PASS    AA=A;DP=90      GT:GQ:DP        1|0:100:22      0|0:62:20       1|0:100:48
+8      97298701        .       C       A       .       PASS    AA=C;DP=91      GT:GQ:DP        1|0:100:22      0|0:62:20       1|0:100:53
+1      12500033        .       G       T       .       PASS    AA=T;DP=96      GT:GQ:DP        1|0:100:22      0|0:62:20       1|0:100:55
+1      106685048       rs61789793      T       C       .       PASS    AA=T;DP=101     GT:GQ:DP        1|0:100:22      0|0:62:20       1|0:100:63
+8      138964911       rs907460        C       G       .       PASS    AA=G;DP=111     GT:GQ:DP        1|0:100:22      0|0:62:20       1|0:100:68
+11     35521416        rs680742        G       A       .       PASS    AA=G;DP=116     GT:GQ:DP        1|0:100:22      0|0:62:20       1|0:100:75
+7      32405598        .       A       T       .       PASS    AA=T;DP=99      GT:GQ:DP        1|0:100:22      0|0:62:21       1|0:100:55
+6      85399834        rs59178872      G       A       .       PASS    AA=G;DP=106     GT:GQ:DP        1|0:100:22      0|0:62:21       1|0:100:62
+3      87485041        rs12638152      G       A       .       PASS    AA=A;DP=99      GT:GQ:DP        1|0:100:22      0|0:62:23       1|0:100:55
+10     109554861       rs2418998       G       C       .       PASS    AA=G;DP=96      GT:GQ:DP        1|0:100:22      0|0:65:21       1|0:100:38
+7      15035543        rs17168605      A       T       .       PASS    AA=T;DP=81      GT:GQ:DP        1|0:100:22      0|0:65:21       1|0:100:39
+13     85476316        rs9594094       G       A       .       PASS    AA=G;DP=89      GT:GQ:DP        1|0:100:22      0|0:65:21       1|0:100:47
+7      116188272       rs60649413      G       T       .       PASS    AA=G;DP=94      GT:GQ:DP        1|0:100:22      0|0:65:21       1|0:100:51
+7      94918274        rs992630        T       C       .       PASS    AA=T;DP=97      GT:GQ:DP        1|0:100:22      0|0:65:21       1|0:100:51
+13     38900310        .       C       T       .       PASS    AA=T;DP=96      GT:GQ:DP        1|0:100:22      0|0:65:21       1|0:100:52
+22     22358190        rs9624290       T       C       .       PASS    AA=.;DP=110     GT:GQ:DP        1|0:100:22      0|0:65:21       1|0:100:64
+4      180906622       .       A       T       .       PASS    AA=A;DP=105     GT:GQ:DP        1|0:100:22      0|0:65:22       1|0:100:60
+4      25454516        rs35198951      G       A       .       PASS    AA=A;DP=118     GT:GQ:DP        1|0:100:22      0|0:65:22       1|0:100:74
+17     63668121        .       T       C       .       PASS    AA=t;DP=122     GT:GQ:DP        1|0:100:22      0|0:65:22       1|0:100:76
+18     67394964        rs9953955       T       C       .       PASS    AA=T;DP=107     GT:GQ:DP        1|0:100:22      0|0:65:24       1|0:100:63
+10     116221910       .       T       C       .       PASS    AA=T;DP=126     GT:GQ:DP        1|0:100:22      0|0:65:28       1|0:100:76
+17     56480307        .       G       T       .       PASS    AA=G;DP=97      GT:GQ:DP        1|0:100:22      0|0:68:22       1|0:100:41
+2      22202044        rs7601596       G       T       .       PASS    AA=T;DP=89      GT:GQ:DP        1|0:100:22      0|0:68:22       1|0:100:45
+5      55036076        rs7701956       A       C       .       PASS    AA=C;DP=91      GT:GQ:DP        1|0:100:22      0|0:68:22       1|0:100:46
+9      1100070 rs28891068      A       G       .       PASS    AA=A;DP=112     GT:GQ:DP        1|0:100:22      0|0:68:22       1|0:100:69
+18     166523  .       T       A       .       PASS    AA=T;DP=95      GT:GQ:DP        1|0:100:22      0|0:68:23       1|0:100:50
+16     46152506        rs16945408      A       G       .       PASS    AA=A;DP=96      GT:GQ:DP        1|0:100:22      0|0:68:23       1|0:100:52
+12     41179059        rs2600925       A       G       .       PASS    AA=A;DP=112     GT:GQ:DP        1|0:100:22      0|0:68:23       1|0:100:67
+2      29490544        rs4233734       T       C       .       PASS    AA=T;DP=113     GT:GQ:DP        1|0:100:22      0|0:68:23       1|0:100:70
+19     36826671        rs16966006      T       C       .       PASS    AA=C;DP=95      GT:GQ:DP        1|0:100:22      0|0:71:23       1|0:100:50
+4      151460335       .       A       G       .       PASS    AA=A;DP=93      GT:GQ:DP        1|0:100:22      0|0:71:23       1|0:100:51
+2      69368991        .       A       C       .       PASS    AA=a;DP=99      GT:GQ:DP        1|0:100:22      0|0:71:23       1|0:100:54
+21     26715520        .       A       G       .       PASS    AA=A;DP=107     GT:GQ:DP        1|0:100:22      0|0:71:23       1|0:100:63
+11     81928698        rs1939640       T       C       .       PASS    AA=T;DP=110     GT:GQ:DP        1|0:100:22      0|0:71:23       1|0:100:68
+8      71825664        rs4581087       T       G       .       PASS    AA=T;DP=127     GT:GQ:DP        1|0:100:22      0|0:71:23       1|0:100:81
+12     56585517        rs7954957       C       T       .       PASS    AA=T;DP=131     GT:GQ:DP        1|0:100:22      0|0:71:23       1|0:100:86
+8      85492250        .       T       C       .       PASS    AA=T;DP=90      GT:GQ:DP        1|0:100:22      0|0:71:24       1|0:100:45
+1      99509370        rs11166205      C       T       .       PASS    AA=T;DP=101;HM2 GT:GQ:DP        1|0:100:22      0|0:71:24       1|0:100:55
+16     69846387        rs8056169       G       A       .       PASS    AA=G;DP=106     GT:GQ:DP        1|0:100:22      0|0:71:24       1|0:100:59
+11     56065574        rs7927314       C       T       .       PASS    AA=c;DP=113     GT:GQ:DP        1|0:100:22      0|0:71:24       1|0:100:66
+8      17359908        rs11990937      G       C       .       PASS    AA=g;DP=113     GT:GQ:DP        1|0:100:22      0|0:71:24       1|0:100:68
+9      10925908        rs7871237       C       T       .       PASS    AA=T;DP=118     GT:GQ:DP        1|0:100:22      0|0:71:24       1|0:100:69
+4      118293506       rs1595472       T       C       .       PASS    AA=T;DP=126     GT:GQ:DP        1|0:100:22      0|0:71:24       1|0:100:81
+6      50400899        rs9473790       G       C       .       PASS    AA=N;DP=101     GT:GQ:DP        1|0:100:22      0|0:71:25       1|0:100:56
+7      18665186        rs2285440       T       G       .       PASS    AA=T;DP=97      GT:GQ:DP        1|0:100:22      0|0:74:24       1|0:100:50
+1      192627461       .       A       T       .       PASS    AA=N;DP=99      GT:GQ:DP        1|0:100:22      0|0:74:24       1|0:100:52
+10     36949015        .       G       T       .       PASS    AA=G;DP=98      GT:GQ:DP        1|0:100:22      0|0:74:24       1|0:100:54
+9      106373879       .       C       A       .       PASS    AA=C;DP=107     GT:GQ:DP        1|0:100:22      0|0:74:24       1|0:100:59
+4      61198158        rs17090235      C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        1|0:100:22      0|0:74:24       1|0:100:63
+16     20111881        rs8045526       T       C       .       PASS    AA=C;DP=114     GT:GQ:DP        1|0:100:22      0|0:74:24       1|0:100:66
+21     44527090        .       G       A       .       PASS    AA=G;DP=142     GT:GQ:DP        1|0:100:22      0|0:74:25       1|0:100:50
+4      92044363        .       C       T       .       PASS    AA=C;DP=99      GT:GQ:DP        1|0:100:22      0|0:74:25       1|0:100:52
+13     103831641       rs4772621       C       T       .       PASS    AA=T;DP=114     GT:GQ:DP        1|0:100:22      0|0:74:25       1|0:100:65
+17     41160951        .       T       C       .       PASS    AA=t;DP=123     GT:GQ:DP        1|0:100:22      0|0:74:25       1|0:100:77
+14     22240578        .       T       A       .       PASS    AA=t;DP=128     GT:GQ:DP        1|0:100:22      0|0:74:27       1|0:100:32
+15     85363402        rs28783414      T       C       .       PASS    AA=T;DP=119     GT:GQ:DP        1|0:100:22      0|0:74:27       1|0:100:65
+8      74868749        .       G       A       .       PASS    AA=G;DP=90      GT:GQ:DP        1|0:100:22      0|0:77:25       1|0:100:44
+21     25089932        rs9978232       T       C       .       PASS    AA=T;DP=99      GT:GQ:DP        1|0:100:22      0|0:77:25       1|0:100:53
+16     59204439        rs12447557      G       A       .       PASS    AA=A;DP=115     GT:GQ:DP        1|0:100:22      0|0:77:25       1|0:100:59
+2      211821424       .       C       T       .       PASS    AA=C;DP=106     GT:GQ:DP        1|0:100:22      0|0:77:25       1|0:100:61
+1      74168149        rs12081389      T       A       .       PASS    AA=T;DP=109;HM2 GT:GQ:DP        1|0:100:22      0|0:77:25       1|0:100:62
+16     14161330        .       T       G       .       PASS    AA=T;DP=113     GT:GQ:DP        1|0:100:22      0|0:77:25       1|0:100:65
+5      87860747        .       G       T       .       PASS    AA=T;DP=122     GT:GQ:DP        1|0:100:22      0|0:77:25       1|0:100:75
+5      145794143       rs6880989       C       T       .       PASS    AA=T;DP=131     GT:GQ:DP        1|0:100:22      0|0:77:25       1|0:100:87
+10     96798600        rs1891070       T       C       .       PASS    AA=T;DP=111     GT:GQ:DP        1|0:100:22      0|0:77:26       1|0:100:61
+6      47984698        .       C       T       .       PASS    AA=C;DP=114     GT:GQ:DP        1|0:100:22      0|0:77:27       1|0:100:64
+2      174725960       rs2119137       A       G       .       PASS    AA=A;DP=121     GT:GQ:DP        1|0:100:22      0|0:77:27       1|0:100:75
+10     66034593        rs12243855      A       C       .       PASS    AA=A;DP=108     GT:GQ:DP        1|0:100:22      0|0:80:26       1|0:100:61
+4      64928055        .       C       G       .       PASS    AA=C;DP=129     GT:GQ:DP        1|0:100:22      0|0:80:26       1|0:100:82
+7      144655713       rs7792751       C       T       .       PASS    AA=C;DP=93      GT:GQ:DP        1|0:100:22      0|0:80:27       1|0:100:42
+4      105047753       rs13116278      C       T       .       PASS    AA=C;DP=117     GT:GQ:DP        1|0:100:22      0|0:83:27       1|0:100:66
+3      181658233       .       G       T       .       PASS    AA=T;DP=93      GT:GQ:DP        1|0:100:22      0|0:86:28       1|0:100:39
+1      197507270       .       A       C       .       PASS    AA=A;DP=110     GT:GQ:DP        1|0:100:22      0|0:86:28       1|0:100:62
+11     133545131       .       G       A       .       PASS    AA=G;DP=115     GT:GQ:DP        1|0:100:22      0|0:86:28       1|0:100:63
+3      152255392       rs16863143      A       G       .       PASS    AA=G;DP=143     GT:GQ:DP        1|0:100:22      0|0:86:28       1|0:100:92
+10     54934662        .       C       T       .       PASS    AA=C;DP=125     GT:GQ:DP        1|0:100:22      0|0:86:34       1|0:100:69
+12     76045504        rs11103870      A       G       .       PASS    AA=A;DP=113     GT:GQ:DP        1|0:100:22      0|0:89:29       1|0:100:61
+4      61618166        .       G       A       .       PASS    AA=G;DP=119     GT:GQ:DP        1|0:100:22      0|0:89:29       1|0:100:66
+4      152963360       .       C       T       .       PASS    AA=C;DP=125     GT:GQ:DP        1|0:100:22      0|0:89:29       1|0:100:72
+1      72715251        .       T       G       .       PASS    AA=T;DP=107     GT:GQ:DP        1|0:100:22      0|0:89:30       1|0:100:55
+1      246037482       .       T       C       .       PASS    AA=T;DP=130     GT:GQ:DP        1|0:100:22      0|0:89:30       1|0:100:77
+8      65796774        rs4327887       C       T       .       PASS    AA=C;DP=78      GT:GQ:DP        1|0:100:22      0|0:8:8 1|0:100:49
+8      73446870        .       G       C       .       PASS    AA=G;DP=120     GT:GQ:DP        1|0:100:22      0|0:92:30       1|0:100:65
+21     38535413        rs2836236       G       A       .       PASS    AA=G;DP=141     GT:GQ:DP        1|0:100:22      0|0:95:31       1|0:100:92
+4      11697489        rs12649806      C       G       .       PASS    AA=G;DP=121     GT:GQ:DP        1|0:100:22      0|0:95:33       1|0:100:63
+20     9415525 rs6086906       A       G       .       PASS    AA=G;DP=118     GT:GQ:DP        1|0:100:22      0|0:98:32       1|0:100:65
+20     57676461        .       C       T       .       PASS    AA=C;DP=131     GT:GQ:DP        1|0:100:22      0|0:98:32       1|0:100:77
+1      170323796       .       A       G       .       PASS    AA=A;DP=142     GT:GQ:DP        1|0:100:22      0|0:98:33       1|0:100:88
+2      175267050       rs2358891       G       A       .       PASS    AA=G;DP=104     GT:GQ:DP        1|0:100:22      1|0:100:14      1|1:100:67
+14     62354885        rs11620672      G       A       .       PASS    AA=A;DP=83      GT:GQ:DP        1|0:100:22      1|0:100:14      1|1:85:44
+19     1697688 rs758092        G       T       .       PASS    AA=G;DP=112     GT:GQ:DP        1|0:100:22      1|0:100:15      1|1:100:75
+3      34184504        .       G       A       .       PASS    AA=G;DP=78      GT:GQ:DP        1|0:100:22      1|0:100:15      1|1:86:40
+9      93881790        rs57310547      C       T       .       PASS    AA=C;DP=85      GT:GQ:DP        1|0:100:22      1|0:100:16      1|1:100:38
+7      142809421       .       C       T       .       PASS    AA=C;DP=87      GT:GQ:DP        1|0:100:22      1|0:100:16      1|1:100:50
+9      80171879        rs3010745       G       A       .       PASS    AA=A;DP=98      GT:GQ:DP        1|0:100:22      1|0:100:16      1|1:100:61
+5      74353035        rs4492095       G       C       .       PASS    AA=C;DP=97      GT:GQ:DP        1|0:100:22      1|0:100:16      1|1:99:47
+21     22931604        rs61104646      A       G       .       PASS    AA=A;DP=90      GT:GQ:DP        1|0:100:22      1|0:100:16      1|1:99:52
+3      80433496        rs12493141      T       G       .       PASS    AA=T;DP=98      GT:GQ:DP        1|0:100:22      1|0:100:17      1|1:100:57
+3      175479847       rs7646919       G       A       .       PASS    AA=G;DP=96      GT:GQ:DP        1|0:100:22      1|0:100:17      1|1:100:58
+10     80026589        .       G       T       .       PASS    AA=G;DP=100     GT:GQ:DP        1|0:100:22      1|0:100:17      1|1:100:61
+15     44354406        rs1434685       C       T       .       PASS    AA=T;DP=102     GT:GQ:DP        1|0:100:22      1|0:100:17      1|1:100:61
+12     24229342        rs11047301      G       C       .       PASS    AA=G;DP=105     GT:GQ:DP        1|0:100:22      1|0:100:19      1|1:100:60
+4      86371962        rs13125032      C       T       .       PASS    AA=C;DP=70      GT:GQ:DP        1|0:100:22      1|0:100:19      1|1:63:22
+1      181498170       .       A       G       .       PASS    AA=A;DP=88      GT:GQ:DP        1|0:100:22      1|0:100:20      1|1:100:45
+22     20695205        rs418913        A       G       .       PASS    AA=a;DP=99      GT:GQ:DP        1|0:100:22      1|0:100:20      1|1:100:61
+11     121474619       rs57065439      T       C       .       PASS    AA=T;DP=76      GT:GQ:DP        1|0:100:22      1|0:100:20      1|1:69:24
+1      188097859       rs1400541       C       A       .       PASS    AA=A;DP=104;HM2 GT:GQ:DP        1|0:100:22      1|0:100:21      1|1:100:59
+12     79022606        .       T       A       .       PASS    AA=T;DP=104     GT:GQ:DP        1|0:100:22      1|0:100:21      1|1:100:61
+8      40245518        rs2924998       A       G       .       PASS    AA=G;DP=97      GT:GQ:DP        1|0:100:22      1|0:100:22      1|1:100:53
+18     6915388 rs580679        G       A       .       PASS    AA=A;DP=105     GT:GQ:DP        1|0:100:22      1|0:100:22      1|1:100:62
+2      28646031        rs7574675       A       C       .       PASS    AA=C;DP=110     GT:GQ:DP        1|0:100:22      1|0:100:22      1|1:100:67
+12     19234847        rs11044446      A       T       .       PASS    AA=A;DP=114     GT:GQ:DP        1|0:100:22      1|0:100:22      1|1:100:68
+2      12915802        .       G       C       .       PASS    AA=C;DP=135     GT:GQ:DP        1|0:100:22      1|0:100:23      1|1:100:75
+3      16572818        rs9822805       T       C       .       PASS    AA=C;DP=99      GT:GQ:DP        1|0:100:22      1|0:100:23      1|1:87:42
+7      31145198        .       C       T       .       PASS    AA=C;DP=101     GT:GQ:DP        1|0:100:22      1|0:100:24      1|1:100:53
+3      141032222       .       G       A       .       PASS    AA=G;DP=117     GT:GQ:DP        1|0:100:22      1|0:100:25      1|1:100:68
+15     61270255        rs1039444       T       C       .       PASS    AA=t;DP=99      GT:GQ:DP        1|0:100:22      1|0:100:26      1|1:100:52
+6      74637168        rs1437567       T       G       .       PASS    AA=T;DP=115     GT:GQ:DP        1|0:100:22      1|0:100:26      1|1:100:69
+4      98206296        rs9998866       C       A       .       PASS    AA=A;DP=85      GT:GQ:DP        1|0:100:22      1|0:100:26      1|1:78:27
+20     5813504 rs1287050       G       C       .       PASS    AA=G;DP=128     GT:GQ:DP        1|0:100:22      1|0:100:27      1|1:100:79
+16     64657293        rs2344343       A       G       .       PASS    AA=a;DP=118     GT:GQ:DP        1|0:100:22      1|0:100:28      1|1:100:68
+21     15554684        rs9982222       G       A       .       PASS    AA=G;DP=116     GT:GQ:DP        1|0:100:22      1|0:100:29      1|1:100:64
+10     34436678        rs12414748      T       G       .       PASS    AA=T;DP=111     GT:GQ:DP        1|0:100:22      1|0:100:30      1|1:100:57
+12     71304720        rs11179288      T       A       .       PASS    AA=T;DP=112     GT:GQ:DP        1|0:100:22      1|0:100:30      1|1:75:61
+5      8072602 rs13188518      G       T       .       PASS    AA=g;DP=105     GT:GQ:DP        1|0:100:22      1|0:100:31      1|1:100:52
+10     61357423        rs1684913       C       T       .       PASS    AA=C;DP=74      GT:GQ:DP        1|0:100:22      1|0:25:12       1|1:50:29
+7      33873556        rs58278293      C       T       .       PASS    AA=C;DP=78      GT:GQ:DP        1|0:100:22      1|0:37:15       1|1:100:39
+3      147222748       rs4681284       A       C       .       PASS    AA=C;DP=90      GT:GQ:DP        1|0:100:22      1|0:38:20       1|1:38:37
+14     39480030        rs10146802      G       A       .       PASS    AA=A;DP=95      GT:GQ:DP        1|0:100:22      1|0:48:17       1|1:100:49
+11     26567614        rs294004        G       T       .       PASS    AA=T;DP=96      GT:GQ:DP        1|0:100:22      1|0:59:19       1|1:100:56
+2      51249587        rs2111372       G       C       .       PASS    AA=C;DP=107     GT:GQ:DP        1|0:100:22      1|0:62:16       1|1:100:65
+10     129539555       rs12772462      A       G       .       PASS    AA=G;DP=100     GT:GQ:DP        1|0:100:22      1|0:68:14       1|1:100:64
+2      196947376       rs13408463      C       T       .       PASS    AA=T;DP=112     GT:GQ:DP        1|0:100:22      1|0:68:18       1|1:100:71
+18     23661735        rs8091543       G       T       .       PASS    AA=N;DP=89      GT:GQ:DP        1|0:100:22      1|0:75:15       1|1:100:52
+4      1751094 rs10032922      C       T       .       PASS    AA=C;DP=92      GT:GQ:DP        1|0:100:22      1|0:75:8        1|1:100:52
+15     96923395        rs4965422       G       C       .       PASS    AA=C;DP=79      GT:GQ:DP        1|0:100:22      1|0:76:9        1|1:100:40
+16     13439520        rs12935001      G       A       .       PASS    AA=G;DP=95      GT:GQ:DP        1|0:100:22      1|0:78:14       1|1:100:59
+3      59846089        rs602197        G       A       .       PASS    AA=G;DP=132     GT:GQ:DP        1|0:100:22      1|0:78:24       1|1:100:89
+3      191171924       rs3773935       A       T       .       PASS    AA=T;DP=91      GT:GQ:DP        1|0:100:22      1|0:87:16       1|1:100:54
+7      5598637 rs56156320      A       C       .       PASS    AA=C;DP=97      GT:GQ:DP        1|0:100:22      1|0:8:4 1|1:100:71
+4      143206624       rs6849189       C       A       .       PASS    AA=C;DP=111     GT:GQ:DP        1|0:100:22      1|0:90:16       1|1:90:31
+1      102717969       .       G       A       .       PASS    AA=G;DP=65      GT:GQ:DP        1|0:100:22      1|0:91:18       1|1:51:18
+3      192558343       rs28627146      A       G       .       PASS    AA=A;DP=94      GT:GQ:DP        1|0:100:22      1|0:92:18       1|1:100:44
+7      106358959       .       G       A       .       PASS    AA=G;DP=91      GT:GQ:DP        1|0:100:22      1|0:94:15       1|1:100:55
+22     31867277        rs5026192       A       G       .       PASS    AA=G;DP=95      GT:GQ:DP        1|0:100:22      1|0:94:17       1|1:100:57
+14     38269548        rs17108316      T       G       .       PASS    AA=G;DP=84      GT:GQ:DP        1|0:100:22      1|0:96:18       1|1:91:33
+10     32028034        rs796155        G       A       .       PASS    AA=A;DP=116     GT:GQ:DP        1|0:100:22      1|0:96:24       1|1:100:70
+3      33251049        .       T       G       .       PASS    AA=T;DP=85      GT:GQ:DP        1|0:100:22      1|0:97:15       1|1:100:50
+6      55048361        rs9367609       C       G       .       PASS    AA=C;DP=73      GT:GQ:DP        1|0:100:22      1|1:18:6        1|1:100:46
+18     8465148 rs1993618       T       C       .       PASS    AA=C;DP=88      GT:GQ:DP        1|0:100:22      1|1:23:18       1|1:85:40
+6      139351514       rs3813332       T       G       .       PASS    AA=N;DP=92      GT:GQ:DP        1|0:100:22      1|1:24:8        1|1:100:62
+18     63531011        rs1562070       A       C       .       PASS    AA=C;DP=84      GT:GQ:DP        1|0:100:22      1|1:29:24       1|1:78:26
+22     20843231        rs1467862       C       T       .       PASS    AA=C;DP=108     GT:GQ:DP        1|0:100:22      1|1:29:28       1|1:100:56
+2      207789451       rs759662        A       C       .       PASS    AA=C;DP=101     GT:GQ:DP        1|0:100:22      1|1:31:18       1|1:100:63
+4      102388080       rs2850954       C       T       .       PASS    AA=C;DP=82      GT:GQ:DP        1|0:100:22      1|1:31:18       1|1:51:36
+13     66162176        rs9599134       T       C       .       PASS    AA=T;DP=102     GT:GQ:DP        1|0:100:22      1|1:32:25       1|1:100:55
+5      57195152        rs4562008       A       G       .       PASS    AA=G;DP=102     GT:GQ:DP        1|0:100:22      1|1:34:20       1|1:100:60
+4      181738856       rs3095966       A       G       .       PASS    AA=A;DP=92      GT:GQ:DP        1|0:100:22      1|1:36:19       1|1:100:49
+18     29616325        rs1493914       C       T       .       PASS    AA=T;DP=78      GT:GQ:DP        1|0:100:22      1|1:39:13       1|1:81:41
+6      109169657       rs500108        T       C       .       PASS    AA=T;DP=81      GT:GQ:DP        1|0:100:22      1|1:42:16       1|1:100:43
+5      102030382       rs2657436       G       C       .       PASS    AA=G;DP=77      GT:GQ:DP        1|0:100:22      1|1:42:17       1|1:75:38
+13     92969868        rs2590539       C       T       .       PASS    AA=C;DP=117     GT:GQ:DP        1|0:100:22      1|1:42:23       1|1:100:73
+1      55249915        rs2495510       A       G       .       PASS    AA=.;DP=99;HM2;HM3      GT:GQ:DP        1|0:100:22      1|1:44:26       1|1:100:52
+4      146684544       rs17020313      T       C       .       PASS    AA=T;DP=87      GT:GQ:DP        1|0:100:22      1|1:45:15       1|1:100:39
+18     2639882 rs2509468       A       T       .       PASS    AA=T;DP=91      GT:GQ:DP        1|0:100:22      1|1:45:16       1|1:100:53
+12     104622117       rs4553448       T       C       .       PASS    AA=C;DP=89      GT:GQ:DP        1|0:100:22      1|1:48:16       1|1:100:45
+3      174755057       rs6445111       A       G       .       PASS    AA=G;DP=98      GT:GQ:DP        1|0:100:22      1|1:51:21       1|1:100:52
+13     100400613       rs2490535       G       A       .       PASS    AA=G;DP=105     GT:GQ:DP        1|0:100:22      1|1:51:22       1|1:100:48
+12     106560033       rs9919712       T       C       .       PASS    AA=t;DP=130     GT:GQ:DP        1|0:100:22      1|1:51:24       1|1:100:82
+4      56325848        rs9790437       A       G       .       PASS    AA=G;DP=100     GT:GQ:DP        1|0:100:22      1|1:52:23       1|1:100:42
+20     6124778 rs6053960       T       C       .       PASS    AA=C;DP=103     GT:GQ:DP        1|0:100:22      1|1:54:18       1|1:100:52
+2      166391654       rs2042578       T       C       .       PASS    AA=C;DP=104     GT:GQ:DP        1|0:100:22      1|1:54:18       1|1:100:68
+3      102086144       rs1370160       T       C       .       PASS    AA=T;DP=115     GT:GQ:DP        1|0:100:22      1|1:54:18       1|1:100:75
+20     20093218        rs6046677       A       G       .       PASS    AA=A;DP=122     GT:GQ:DP        1|0:100:22      1|1:57:26       1|1:100:74
+14     51690383        rs2884192       A       G       .       PASS    AA=G;DP=132     GT:GQ:DP        1|0:100:22      1|1:60:20       1|1:100:48
+6      17386788        rs13208056      C       T       .       PASS    AA=C;DP=85      GT:GQ:DP        1|0:100:22      1|1:60:20       1|1:67:38
+3      156491829       rs2291357       A       G       .       PASS    AA=G;DP=116     GT:GQ:DP        1|0:100:22      1|1:60:21       1|1:100:56
+3      97533104        rs7634339       C       T       .       PASS    AA=T;DP=94      GT:GQ:DP        1|0:100:22      1|1:60:22       1|1:100:51
+6      89211700        rs6454693       C       T       .       PASS    AA=T;DP=62      GT:GQ:DP        1|0:100:22      1|1:63:22       1|1:51:17
+1      105590037       rs2653974       A       G       .       PASS    AA=G;DP=100     GT:GQ:DP        1|0:100:22      1|1:66:22       1|1:100:54
+11     98614646        rs59307159      A       G       .       PASS    AA=G;DP=80      GT:GQ:DP        1|0:100:22      1|1:66:22       1|1:89:37
+7      124463290       rs13234368      A       C       .       PASS    AA=A;DP=104     GT:GQ:DP        1|0:100:22      1|1:78:26       1|1:100:53
+3      55422134        rs4955850       C       T       .       PASS    AA=T;DP=104     GT:GQ:DP        1|0:100:22      1|1:78:26       1|1:100:55
+6      24837902        rs4712844       G       C       .       PASS    AA=C;DP=99      GT:GQ:DP        1|0:100:22      1|1:81:27       1|1:100:51
+17     30053844        rs7215529       C       G       .       PASS    AA=G;DP=155     GT:GQ:DP        1|0:100:22      1|1:84:29       1|1:100:87
+12     4824812 rs2041382       C       T       .       PASS    AA=C;DP=127     GT:GQ:DP        1|0:100:22      1|1:96:34       1|1:100:71
+5      92197564        .       T       G       .       PASS    AA=T;DP=120     GT:GQ:DP        1|0:100:23      0|0:100:34      1|0:100:63
+6      94239458        .       G       A       .       PASS    AA=G;DP=124     GT:GQ:DP        1|0:100:23      0|0:100:34      1|0:100:65
+14     78629993        .       T       C       .       PASS    AA=T;DP=121     GT:GQ:DP        1|0:100:23      0|0:100:36      1|0:100:63
+4      43140011        .       A       G       .       PASS    AA=A;DP=130     GT:GQ:DP        1|0:100:23      0|0:100:36      1|0:100:67
+5      138203341       .       A       G       .       PASS    AA=A;DP=149     GT:GQ:DP        1|0:100:23      0|0:100:37      1|0:100:89
+11     108733492       .       A       G       .       PASS    AA=A;DP=131     GT:GQ:DP        1|0:100:23      0|0:100:40      1|0:100:55
+1      57298820        rs60226729      G       T       .       PASS    AA=G;DP=110     GT:GQ:DP        1|0:100:23      0|0:13:14       1|0:100:34
+4      99310111        rs17027308      T       A       .       PASS    AA=T;DP=104     GT:GQ:DP        1|0:100:23      0|0:20:16       1|0:100:66
+11     598180  .       A       G       .       PASS    AA=A;DP=76      GT:GQ:DP        1|0:100:23      0|0:20:6        1|0:100:40
+18     35377608        .       T       C       .       PASS    AA=T;DP=96      GT:GQ:DP        1|0:100:23      0|0:21:17       1|0:100:55
+13     110723711       .       C       G       .       PASS    AA=C;DP=108     GT:GQ:DP        1|0:100:23      0|0:27:15       1|0:100:71
+3      147795607       .       G       A       .       PASS    AA=C;DP=96      GT:GQ:DP        1|0:100:23      0|0:29:10       1|0:100:54
+6      122828770       rs9401547       C       A       .       PASS    AA=A;DP=94      GT:GQ:DP        1|0:100:23      0|0:29:18       1|0:100:53
+11     120267081       rs57657899      C       G       .       PASS    AA=C;DP=111     GT:GQ:DP        1|0:100:23      0|0:29:20       1|0:100:56
+6      68581319        rs9454300       C       T       .       PASS    AA=C;DP=94      GT:GQ:DP        1|0:100:23      0|0:31:15       1|0:100:56
+4      179982552       rs1348364       C       A       .       PASS    AA=A;DP=83      GT:GQ:DP        1|0:100:23      0|0:32:10       1|0:100:48
+4      190269269       .       T       G       .       PASS    AA=T;DP=109     GT:GQ:DP        1|0:100:23      0|0:32:10       1|0:100:77
+3      173584481       rs534756        G       C       .       PASS    AA=C;DP=87      GT:GQ:DP        1|0:100:23      0|0:32:11       1|0:100:54
+6      91161982        rs59269950      C       A       .       PASS    AA=C;DP=118     GT:GQ:DP        1|0:100:23      0|0:32:19       1|0:100:77
+3      33878440        rs59197734      G       A       .       PASS    AA=G;DP=102     GT:GQ:DP        1|0:100:23      0|0:32:21       1|0:100:56
+12     68482162        .       G       T       .       PASS    AA=G;DP=88      GT:GQ:DP        1|0:100:23      0|0:33:20       1|0:100:45
+9      101169735       rs7038667       C       T       .       PASS    AA=C;DP=77      GT:GQ:DP        1|0:100:23      0|0:35:11       1|0:100:33
+5      107703274       rs17161251      T       C       .       PASS    AA=T;DP=83      GT:GQ:DP        1|0:100:23      0|0:35:11       1|0:100:48
+13     103630825       rs59208521      A       C       .       PASS    AA=A;DP=83      GT:GQ:DP        1|0:100:23      0|0:35:11       1|0:100:51
+1      96548296        rs12066611      T       C       .       PASS    AA=T;DP=86;HM2;HM3      GT:GQ:DP        1|0:100:23      0|0:35:11       1|0:100:52
+8      115492174       rs209684        C       A       .       PASS    AA=c;DP=87      GT:GQ:DP        1|0:100:23      0|0:35:11       1|0:100:52
+2      100320623       rs4851299       C       A       .       PASS    AA=C;DP=87      GT:GQ:DP        1|0:100:23      0|0:35:12       1|0:100:52
+17     12418671        rs8073590       A       G       .       PASS    AA=G;DP=97      GT:GQ:DP        1|0:100:23      0|0:36:22       1|0:100:53
+5      16592604        rs767456        A       G       .       PASS    AA=A;DP=70      GT:GQ:DP        1|0:100:23      0|0:38:12       1|0:100:36
+2      114434513       rs34699644      A       G       .       PASS    AA=A;DP=77      GT:GQ:DP        1|0:100:23      0|0:38:13       1|0:100:40
+5      159446387       .       G       T       .       PASS    AA=T;DP=98      GT:GQ:DP        1|0:100:23      0|0:39:18       1|0:100:57
+17     77705512        rs6502068       C       T       .       PASS    AA=C;DP=102     GT:GQ:DP        1|0:100:23      0|0:41:13       1|0:100:56
+14     48787249        rs2790588       A       G       .       PASS    AA=A;DP=114     GT:GQ:DP        1|0:100:23      0|0:41:13       1|0:100:79
+6      33150269        rs9380340       A       G       .       PASS    AA=A;DP=78      GT:GQ:DP        1|0:100:23      0|0:41:14       1|0:100:41
+1      54814306        rs59635221      C       G       .       PASS    AA=C;DP=98      GT:GQ:DP        1|0:100:23      0|0:41:14       1|0:100:60
+4      72006455        .       A       G       .       PASS    AA=A;DP=103     GT:GQ:DP        1|0:100:23      0|0:41:14       1|0:100:65
+5      152294892       .       C       G       .       PASS    AA=C;DP=93      GT:GQ:DP        1|0:100:23      0|0:41:15       1|0:100:55
+9      80853643        rs2378305       C       A       .       PASS    AA=C;DP=101     GT:GQ:DP        1|0:100:23      0|0:41:21       1|0:100:57
+4      66848424        .       A       G       .       PASS    AA=a;DP=110     GT:GQ:DP        1|0:100:23      0|0:42:22       1|0:100:62
+1      242345745       rs61399159      G       T       .       PASS    AA=G;DP=101     GT:GQ:DP        1|0:100:23      0|0:43:25       1|0:100:52
+3      65457785        rs56841534      A       G       .       PASS    AA=A;DP=79      GT:GQ:DP        1|0:100:23      0|0:44:14       1|0:100:32
+2      224945315       rs16865895      T       C       .       PASS    AA=T;DP=89      GT:GQ:DP        1|0:100:23      0|0:44:14       1|0:100:46
+4      44060006        rs16856862      C       T       .       PASS    AA=c;DP=91      GT:GQ:DP        1|0:100:23      0|0:44:14       1|0:100:51
+9      74443549        rs1037031       G       A       .       PASS    AA=G;DP=88      GT:GQ:DP        1|0:100:23      0|0:44:15       1|0:100:50
+11     58944373        .       T       A       .       PASS    AA=T;DP=117     GT:GQ:DP        1|0:100:23      0|0:44:15       1|0:100:63
+5      23098614        rs60960314      C       A       .       PASS    AA=C;DP=107     GT:GQ:DP        1|0:100:23      0|0:44:16       1|0:100:66
+4      177803810       rs10471205      T       C       .       PASS    AA=T;DP=92      GT:GQ:DP        1|0:100:23      0|0:45:22       1|0:100:36
+7      94210128        .       T       A       .       PASS    AA=T;DP=116     GT:GQ:DP        1|0:100:23      0|0:45:24       1|0:100:70
+4      181779149       rs2613040       T       C       .       PASS    AA=C;DP=115     GT:GQ:DP        1|0:100:23      0|0:46:26       1|0:100:63
+12     60305826        rs4758835       G       C       .       PASS    AA=G;DP=120     GT:GQ:DP        1|0:100:23      0|0:46:26       1|0:100:71
+1      74559952        rs484016        C       A       .       PASS    AA=C;DP=81      GT:GQ:DP        1|0:100:23      0|0:47:15       1|0:100:42
+6      122691574       .       T       A       .       PASS    AA=T;DP=85      GT:GQ:DP        1|0:100:23      0|0:47:15       1|0:100:47
+12     59513978        .       T       C       .       PASS    AA=T;DP=103     GT:GQ:DP        1|0:100:23      0|0:47:15       1|0:100:66
+21     24681137        rs2829033       G       C       .       PASS    AA=g;DP=107     GT:GQ:DP        1|0:100:23      0|0:47:15       1|0:100:70
+1      164576634       rs4518879       T       G       .       PASS    AA=G;DP=70      GT:GQ:DP        1|0:100:23      0|0:47:16       1|0:100:27
+5      159775989       .       C       T       .       PASS    AA=T;DP=101     GT:GQ:DP        1|0:100:23      0|0:47:16       1|0:100:58
+1      239718439       .       A       G       .       PASS    AA=A;DP=109     GT:GQ:DP        1|0:100:23      0|0:47:16       1|0:100:70
+1      3264937 rs56215001      A       G       .       PASS    AA=A;DP=108     GT:GQ:DP        1|0:100:23      0|0:47:16       1|0:100:71
+7      146924918       rs10952701      C       A       .       PASS    AA=c;DP=106     GT:GQ:DP        1|0:100:23      0|0:48:21       1|0:100:62
+15     38807826        .       G       A       .       PASS    AA=-;DP=126     GT:GQ:DP        1|0:100:23      0|0:49:22       1|0:100:80
+4      65371824        rs10446804      G       A       .       PASS    AA=G;DP=80      GT:GQ:DP        1|0:100:23      0|0:49:24       1|0:100:32
+5      39538690        .       G       C       .       PASS    AA=G;DP=119     GT:GQ:DP        1|0:100:23      0|0:49:27       1|0:100:68
+3      160079195       rs340255        G       A       .       PASS    AA=G;DP=127     GT:GQ:DP        1|0:100:23      0|0:49:27       1|0:100:80
+2      80190430        rs57527274      C       T       .       PASS    AA=C;DP=91      GT:GQ:DP        1|0:100:23      0|0:50:16       1|0:100:52
+16     12417650        rs6498296       C       G       .       PASS    AA=C;DP=93      GT:GQ:DP        1|0:100:23      0|0:50:16       1|0:100:53
+8      119773891       rs7845584       C       T       .       PASS    AA=T;DP=94      GT:GQ:DP        1|0:100:23      0|0:50:16       1|0:100:56
+13     37571641        rs9315551       C       G       .       PASS    AA=C;DP=99      GT:GQ:DP        1|0:100:23      0|0:50:16       1|0:100:57
+8      72310739        rs16937526      T       C       .       PASS    AA=T;DP=97      GT:GQ:DP        1|0:100:23      0|0:50:16       1|0:100:57
+17     48327619        rs9901013       G       C       .       PASS    AA=c;DP=98      GT:GQ:DP        1|0:100:23      0|0:50:16       1|0:100:58
+20     25150508        rs6050456       A       G       .       PASS    AA=G;DP=102     GT:GQ:DP        1|0:100:23      0|0:50:16       1|0:100:62
+11     64691078        rs61202604      T       G       .       PASS    AA=t;DP=103     GT:GQ:DP        1|0:100:23      0|0:50:16       1|0:100:66
+2      35943943        rs7562162       A       T       .       PASS    AA=T;DP=103     GT:GQ:DP        1|0:100:23      0|0:50:16       1|0:100:67
+2      71284126        rs59664068      G       A       .       PASS    AA=G;DP=105     GT:GQ:DP        1|0:100:23      0|0:50:16       1|0:100:67
+9      1651903 rs1323229       A       T       .       PASS    AA=A;DP=116     GT:GQ:DP        1|0:100:23      0|0:50:16       1|0:100:77
+2      37621255        rs57720355      C       T       .       PASS    AA=C;DP=90      GT:GQ:DP        1|0:100:23      0|0:50:17       1|0:100:48
+4      158675207       .       T       C       .       PASS    AA=T;DP=95      GT:GQ:DP        1|0:100:23      0|0:50:17       1|0:100:56
+22     38797522        .       A       G       .       PASS    AA=A;DP=103     GT:GQ:DP        1|0:100:23      0|0:50:17       1|0:100:66
+12     17589757        .       T       C       .       PASS    AA=T;DP=89      GT:GQ:DP        1|0:100:23      0|0:53:17       1|0:100:49
+7      3854155 .       C       T       .       PASS    AA=C;DP=93      GT:GQ:DP        1|0:100:23      0|0:53:17       1|0:100:53
+5      57556905        rs60207420      A       G       .       PASS    AA=A;DP=102     GT:GQ:DP        1|0:100:23      0|0:53:17       1|0:100:62
+12     130805432       rs1982527       A       G       .       PASS    AA=A;DP=103     GT:GQ:DP        1|0:100:23      0|0:53:17       1|0:100:63
+2      119977632       rs13401517      C       A       .       PASS    AA=C;DP=105     GT:GQ:DP        1|0:100:23      0|0:53:17       1|0:100:67
+9      26157992        rs10116773      T       C       .       PASS    AA=T;DP=115     GT:GQ:DP        1|0:100:23      0|0:53:17       1|0:100:75
+12     72325915        .       A       T       .       PASS    AA=A;DP=95      GT:GQ:DP        1|0:100:23      0|0:53:18       1|0:100:42
+22     47055273        .       C       T       .       PASS    AA=C;DP=99      GT:GQ:DP        1|0:100:23      0|0:53:18       1|0:100:58
+10     107723530       rs481179        C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        1|0:100:23      0|0:53:18       1|0:100:75
+17     78415269        rs56676443      C       T       .       PASS    AA=C;DP=124     GT:GQ:DP        1|0:100:23      0|0:53:18       1|0:100:83
+6      147589832       .       A       G       .       PASS    AA=A;DP=108     GT:GQ:DP        1|0:100:23      0|0:53:19       1|0:100:68
+6      103148106       .       A       G       .       PASS    AA=N;DP=94      GT:GQ:DP        1|0:100:23      0|0:53:24       1|0:100:47
+3      85395914        .       A       T       .       PASS    AA=A;DP=118     GT:GQ:DP        1|0:100:23      0|0:53:29       1|0:100:55
+12     25443018        rs10771208      T       C       .       PASS    AA=C;DP=106     GT:GQ:DP        1|0:100:23      0|0:55:29       1|0:100:54
+4      125950067       rs7677514       G       T       .       PASS    AA=G;DP=85      GT:GQ:DP        1|0:100:23      0|0:56:18       1|0:100:19
+2      59791635        .       T       C       .       PASS    AA=T;DP=92      GT:GQ:DP        1|0:100:23      0|0:56:18       1|0:100:48
+19     33141651        rs2190798       C       T       .       PASS    AA=C;DP=100     GT:GQ:DP        1|0:100:23      0|0:56:18       1|0:100:59
+1      106876767       rs12025734      G       A       .       PASS    AA=G;DP=106;HM2;HM3     GT:GQ:DP        1|0:100:23      0|0:56:18       1|0:100:64
+7      115042968       .       G       T       .       PASS    AA=g;DP=105     GT:GQ:DP        1|0:100:23      0|0:56:18       1|0:100:65
+4      144435805       .       G       C       .       PASS    AA=G;DP=108     GT:GQ:DP        1|0:100:23      0|0:56:18       1|0:100:66
+1      105634384       rs12035180      C       T       .       PASS    AA=c;DP=110;HM2 GT:GQ:DP        1|0:100:23      0|0:56:18       1|0:100:67
+8      137778551       rs4101011       G       C       .       PASS    AA=G;DP=109     GT:GQ:DP        1|0:100:23      0|0:56:18       1|0:100:68
+5      85684769        .       T       C       .       PASS    AA=T;DP=84      GT:GQ:DP        1|0:100:23      0|0:56:19       1|0:100:33
+5      131797073       rs2106854       C       T       .       PASS    AA=C;DP=93      GT:GQ:DP        1|0:100:23      0|0:56:19       1|0:100:48
+3      76265112        rs17013868      G       A       .       PASS    AA=A;DP=97      GT:GQ:DP        1|0:100:23      0|0:56:19       1|0:100:55
+1      186953014       rs12032877      G       A       .       PASS    AA=g;DP=97      GT:GQ:DP        1|0:100:23      0|0:56:19       1|0:100:56
+18     815366  .       G       A       .       PASS    AA=G;DP=103     GT:GQ:DP        1|0:100:23      0|0:56:19       1|0:100:64
+9      105766532       rs7864198       T       A       .       PASS    AA=A;DP=108     GT:GQ:DP        1|0:100:23      0|0:56:19       1|0:100:66
+3      59924938        .       C       T       .       PASS    AA=C;DP=99      GT:GQ:DP        1|0:100:23      0|0:56:20       1|0:100:56
+17     63107731        .       C       T       .       PASS    AA=C;DP=102     GT:GQ:DP        1|0:100:23      0|0:56:20       1|0:100:59
+3      79700373        rs35951469      G       A       .       PASS    AA=G;DP=113     GT:GQ:DP        1|0:100:23      0|0:56:20       1|0:100:73
+6      32709738        rs9272190       A       G       .       PASS    AA=A;DP=98      GT:GQ:DP        1|0:100:23      0|0:56:23       1|0:22:52
+2      212216747       .       T       C       .       PASS    AA=T;DP=104     GT:GQ:DP        1|0:100:23      0|0:56:24       1|0:100:58
+2      239256461       .       C       G       .       PASS    AA=C;DP=85      GT:GQ:DP        1|0:100:23      0|0:59:19       1|0:100:44
+1      239156909       rs16841052      C       A       .       PASS    AA=C;DP=89;HM2  GT:GQ:DP        1|0:100:23      0|0:59:19       1|0:100:47
+9      118912013       rs4838204       T       G       .       PASS    AA=T;DP=103     GT:GQ:DP        1|0:100:23      0|0:59:19       1|0:100:59
+7      19338315        rs7796931       T       C       .       PASS    AA=T;DP=104     GT:GQ:DP        1|0:100:23      0|0:59:19       1|0:100:63
+2      79181116        rs58756406      T       C       .       PASS    AA=T;DP=105     GT:GQ:DP        1|0:100:23      0|0:59:19       1|0:100:65
+3      30352500        rs4639013       C       A       .       PASS    AA=c;DP=111     GT:GQ:DP        1|0:100:23      0|0:59:19       1|0:100:69
+5      16917447        .       C       T       .       PASS    AA=C;DP=83      GT:GQ:DP        1|0:100:23      0|0:59:20       1|0:100:33
+1      67455089        .       G       A       .       PASS    AA=G;DP=108     GT:GQ:DP        1|0:100:23      0|0:59:20       1|0:100:64
+1      79436729        .       G       A       .       PASS    AA=G;DP=113     GT:GQ:DP        1|0:100:23      0|0:59:21       1|0:100:71
+7      28431299        rs28500673      A       G       .       PASS    AA=A;DP=111     GT:GQ:DP        1|0:100:23      0|0:61:25       1|0:100:64
+2      116912499       .       T       C       .       PASS    AA=T;DP=106     GT:GQ:DP        1|0:100:23      0|0:62:20       1|0:100:50
+2      6650242 rs10179518      G       T       .       PASS    AA=G;DP=93      GT:GQ:DP        1|0:100:23      0|0:62:20       1|0:100:50
+9      77024865        .       T       C       .       PASS    AA=T;DP=103     GT:GQ:DP        1|0:100:23      0|0:62:20       1|0:100:59
+9      85972063        rs2249523       A       G       .       PASS    AA=A;DP=112     GT:GQ:DP        1|0:100:23      0|0:62:20       1|0:100:61
+4      116028895       .       T       C       .       PASS    AA=T;DP=112     GT:GQ:DP        1|0:100:23      0|0:62:20       1|0:100:72
+13     110072468       rs441805        G       A       .       PASS    AA=A;DP=127     GT:GQ:DP        1|0:100:23      0|0:62:20       1|0:100:87
+4      125570752       .       G       A       .       PASS    AA=G;DP=109     GT:GQ:DP        1|0:100:23      0|0:62:21       1|0:100:66
+3      174556120       rs12638596      T       C       .       PASS    AA=T;DP=123     GT:GQ:DP        1|0:100:23      0|0:62:21       1|0:100:72
+18     42482870        rs8088803       A       G       .       PASS    AA=A;DP=117     GT:GQ:DP        1|0:100:23      0|0:62:21       1|0:100:75
+13     100867449       .       C       G       .       PASS    AA=C;DP=123     GT:GQ:DP        1|0:100:23      0|0:62:21       1|0:100:80
+18     5224248 .       A       G       .       PASS    AA=A;DP=132     GT:GQ:DP        1|0:100:23      0|0:62:22       1|0:100:42
+4      59811111        .       C       T       .       PASS    AA=C;DP=95      GT:GQ:DP        1|0:100:23      0|0:62:22       1|0:100:50
+22     33537563        .       C       T       .       PASS    AA=C;DP=108     GT:GQ:DP        1|0:100:23      0|0:62:22       1|0:100:65
+13     84937545        rs9319161       C       G       .       PASS    AA=C;DP=114     GT:GQ:DP        1|0:100:23      0|0:62:22       1|0:100:71
+14     64073644        rs7151976       A       C       .       PASS    AA=A;DP=127     GT:GQ:DP        1|0:100:23      0|0:62:22       1|0:100:83
+7      17484169        rs6963451       T       G       .       PASS    AA=T;DP=128     GT:GQ:DP        1|0:100:23      0|0:65:21       1|0:100:43
+5      164021047       rs60766523      A       G       .       PASS    AA=G;DP=103     GT:GQ:DP        1|0:100:23      0|0:65:21       1|0:100:59
+1      70890114        .       G       A       .       PASS    AA=G;DP=95      GT:GQ:DP        1|0:100:23      0|0:65:22       1|0:100:52
+6      121247425       .       C       T       .       PASS    AA=C;DP=101     GT:GQ:DP        1|0:100:23      0|0:65:22       1|0:100:58
+7      135992952       .       C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        1|0:100:23      0|0:65:22       1|0:100:67
+6      129871293       rs2571571       A       G       .       PASS    AA=G;DP=97      GT:GQ:DP        1|0:100:23      0|0:65:23       1|0:100:56
+13     28421838        .       A       G       .       PASS    AA=A;DP=125     GT:GQ:DP        1|0:100:23      0|0:65:23       1|0:100:84
+9      113422270       .       C       A       .       PASS    AA=C;DP=101     GT:GQ:DP        1|0:100:23      0|0:67:26       1|0:100:51
+16     73735820        rs7198880       C       G       .       PASS    AA=C;DP=96      GT:GQ:DP        1|0:100:23      0|0:68:22       1|0:100:49
+7      4090237 rs6961563       G       A       .       PASS    AA=N;DP=98      GT:GQ:DP        1|0:100:23      0|0:68:22       1|0:100:53
+3      76621384        rs6788691       A       C       .       PASS    AA=a;DP=102     GT:GQ:DP        1|0:100:23      0|0:68:22       1|0:100:55
+2      205998941       .       T       C       .       PASS    AA=t;DP=105     GT:GQ:DP        1|0:100:23      0|0:68:22       1|0:100:60
+4      63452380        rs1507323       T       G       .       PASS    AA=G;DP=108     GT:GQ:DP        1|0:100:23      0|0:68:22       1|0:100:64
+10     44906059        rs7902733       A       G       .       PASS    AA=a;DP=100     GT:GQ:DP        1|0:100:23      0|0:68:23       1|0:100:54
+4      61761444        .       T       C       .       PASS    AA=T;DP=105     GT:GQ:DP        1|0:100:23      0|0:68:23       1|0:100:59
+2      52188388        rs62141901      C       G       .       PASS    AA=C;DP=115     GT:GQ:DP        1|0:100:23      0|0:68:23       1|0:100:69
+3      187135641       rs16860342      C       T       .       PASS    AA=C;DP=116     GT:GQ:DP        1|0:100:23      0|0:68:24       1|0:100:59
+4      90308683        .       A       T       .       PASS    AA=A;DP=87      GT:GQ:DP        1|0:100:23      0|0:71:23       1|0:100:31
+12     33344175        rs11052602      G       C       .       PASS    AA=C;DP=94      GT:GQ:DP        1|0:100:23      0|0:71:23       1|0:100:45
+8      4924459 rs10100612      G       C       .       PASS    AA=G;DP=101     GT:GQ:DP        1|0:100:23      0|0:71:23       1|0:100:55
+10     84609900        rs342399        T       A       .       PASS    AA=T;DP=108     GT:GQ:DP        1|0:100:23      0|0:71:23       1|0:100:62
+9      114986321       rs10817454      A       G       .       PASS    AA=A;DP=126     GT:GQ:DP        1|0:100:23      0|0:71:24       1|0:100:67
+18     68153964        rs12968506      G       T       .       PASS    AA=g;DP=119     GT:GQ:DP        1|0:100:23      0|0:71:24       1|0:100:71
+15     37955806        .       G       A       .       PASS    AA=g;DP=123     GT:GQ:DP        1|0:100:23      0|0:71:24       1|0:100:73
+11     92441735        rs4753434       G       C       .       PASS    AA=G;DP=114     GT:GQ:DP        1|0:100:23      0|0:71:25       1|0:100:68
+11     73889567        .       C       A       .       PASS    AA=C;DP=91      GT:GQ:DP        1|0:100:23      0|0:74:24       1|0:100:42
+9      105730608       .       G       T       .       PASS    AA=G;DP=103     GT:GQ:DP        1|0:100:23      0|0:74:24       1|0:100:51
+9      113739498       .       G       A       .       PASS    AA=G;DP=149     GT:GQ:DP        1|0:100:23      0|0:74:24       1|0:100:52
+2      65771491        rs873028        C       T       .       PASS    AA=C;DP=112     GT:GQ:DP        1|0:100:23      0|0:74:24       1|0:100:66
+7      70974248        rs60408127      A       G       .       PASS    AA=N;DP=120     GT:GQ:DP        1|0:100:23      0|0:74:24       1|0:100:73
+5      94451298        rs4869233       T       C       .       PASS    AA=T;DP=119     GT:GQ:DP        1|0:100:23      0|0:74:24       1|0:100:76
+12     77423917        rs1717344       T       A       .       PASS    AA=T;DP=118     GT:GQ:DP        1|0:100:23      0|0:74:26       1|0:100:66
+2      111136425       rs58859153      C       T       .       PASS    AA=c;DP=122     GT:GQ:DP        1|0:100:23      0|0:74:27       1|0:100:73
+3      19094220        .       A       C       .       PASS    AA=A;DP=145     GT:GQ:DP        1|0:100:23      0|0:74:32       1|0:100:92
+3      160602168       .       A       G       .       PASS    AA=a;DP=130     GT:GQ:DP        1|0:100:23      0|0:77:25       1|0:100:38
+6      137273723       rs9494594       C       T       .       PASS    AA=T;DP=107     GT:GQ:DP        1|0:100:23      0|0:77:25       1|0:100:58
+1      169437679       rs12691472      C       T       .       PASS    AA=T;DP=108     GT:GQ:DP        1|0:100:23      0|0:77:25       1|0:100:59
+5      62160207        rs34422982      T       A       .       PASS    AA=T;DP=142     GT:GQ:DP        1|0:100:23      0|0:77:25       1|0:100:76
+4      11286698        rs16885858      A       C       .       PASS    AA=A;DP=141     GT:GQ:DP        1|0:100:23      0|0:77:25       1|0:100:92
+11     11932799        .       G       A       .       PASS    AA=G;DP=112     GT:GQ:DP        1|0:100:23      0|0:77:26       1|0:100:63
+7      85089291        .       A       G       .       PASS    AA=A;DP=114     GT:GQ:DP        1|0:100:23      0|0:77:26       1|0:100:66
+8      38655646        rs7011566       A       C       .       PASS    AA=C;DP=108     GT:GQ:DP        1|0:100:23      0|0:77:27       1|0:100:57
+5      62203684        .       T       C       .       PASS    AA=T;DP=108     GT:GQ:DP        1|0:100:23      0|0:77:27       1|0:100:60
+4      66906084        rs57791969      C       T       .       PASS    AA=T;DP=118     GT:GQ:DP        1|0:100:23      0|0:77:27       1|0:100:70
+7      103588347       rs16873387      A       G       .       PASS    AA=A;DP=94      GT:GQ:DP        1|0:100:23      0|0:77:28       1|0:100:46
+10     59452770        rs16911648      A       T       .       PASS    AA=T;DP=102     GT:GQ:DP        1|0:100:23      0|0:80:26       1|0:100:52
+1      165984713       rs55814614      T       A       .       PASS    AA=A;DP=112     GT:GQ:DP        1|0:100:23      0|0:80:26       1|0:100:61
+6      134274921       rs28683498      C       T       .       PASS    AA=C;DP=117     GT:GQ:DP        1|0:100:23      0|0:80:26       1|0:100:70
+3      173819269       .       C       A       .       PASS    AA=C;DP=114     GT:GQ:DP        1|0:100:23      0|0:80:28       1|0:100:61
+7      28905915        rs61672544      T       C       .       PASS    AA=T;DP=116     GT:GQ:DP        1|0:100:23      0|0:80:28       1|0:100:64
+16     83226174        rs57243122      C       T       .       PASS    AA=C;DP=114     GT:GQ:DP        1|0:100:23      0|0:80:29       1|0:100:63
+11     14656699        rs7113970       G       A       .       PASS    AA=g;DP=119     GT:GQ:DP        1|0:100:23      0|0:80:29       1|0:100:68
+14     89573838        rs34328141      G       A       .       PASS    AA=A;DP=94      GT:GQ:DP        1|0:100:23      0|0:83:27       1|0:100:44
+18     1917847 rs8096690       G       A       .       PASS    AA=G;DP=122     GT:GQ:DP        1|0:100:23      0|0:83:28       1|0:100:31
+4      114976409       rs6533716       C       T       .       PASS    AA=T;DP=92      GT:GQ:DP        1|0:100:23      0|0:83:28       1|0:100:40
+3      181841017       .       T       G       .       PASS    AA=T;DP=97      GT:GQ:DP        1|0:100:23      0|0:83:28       1|0:100:47
+4      24063614        .       G       A       .       PASS    AA=G;DP=117     GT:GQ:DP        1|0:100:23      0|0:83:28       1|0:100:65
+12     96681141        rs10860237      G       A       .       PASS    AA=G;DP=117     GT:GQ:DP        1|0:100:23      0|0:83:28       1|0:100:68
+12     132132534       .       G       A       .       PASS    AA=G;DP=125     GT:GQ:DP        1|0:100:23      0|0:83:29       1|0:100:73
+5      83652159        rs1500226       G       A       .       PASS    AA=A;DP=130     GT:GQ:DP        1|0:100:23      0|0:86:28       1|0:100:81
+6      153239143       rs852649        T       C       .       PASS    AA=C;DP=109     GT:GQ:DP        1|0:100:23      0|0:86:29       1|0:100:54
+12     43841932        rs7978929       A       G       .       PASS    AA=a;DP=110     GT:GQ:DP        1|0:100:23      0|0:86:29       1|0:100:61
+6      33010561        rs10751 G       A       .       PASS    AA=G;DP=137     GT:GQ:DP        1|0:100:23      0|0:86:30       1|0:100:84
+6      74237565        .       C       T       .       PASS    AA=C;DP=103     GT:GQ:DP        1|0:100:23      0|0:89:29       1|0:100:53
+2      82979077        .       A       G       .       PASS    AA=A;DP=126     GT:GQ:DP        1|0:100:23      0|0:89:30       1|0:100:74
+5      147871607       rs10044032      G       A       .       PASS    AA=G;DP=124     GT:GQ:DP        1|0:100:23      0|0:89:31       1|0:100:69
+7      156899848       .       G       C       .       PASS    AA=G;DP=84      GT:GQ:DP        1|0:100:23      0|0:8:10        1|0:100:42
+1      177552562       rs2254623       G       A       .       PASS    AA=g;DP=101     GT:GQ:DP        1|0:100:23      0|0:92:30       1|0:100:47
+5      167199870       rs6865076       T       C       .       PASS    AA=T;DP=109     GT:GQ:DP        1|0:100:23      0|0:92:30       1|0:100:58
+4      126740941       .       A       C       .       PASS    AA=A;DP=118     GT:GQ:DP        1|0:100:23      0|0:92:30       1|0:100:62
+3      21035135        rs13078058      G       T       .       PASS    AA=G;DP=113     GT:GQ:DP        1|0:100:23      0|0:92:30       1|0:100:63
+18     12835377        rs61525946      G       A       .       PASS    AA=G;DP=129     GT:GQ:DP        1|0:100:23      0|0:92:31       1|0:100:36
+17     13033778        rs17562828      G       A       .       PASS    AA=G;DP=108     GT:GQ:DP        1|0:100:23      0|0:92:31       1|0:100:55
+3      114373222       rs7635571       T       C       .       PASS    AA=T;DP=130     GT:GQ:DP        1|0:100:23      0|0:92:31       1|0:100:75
+14     39572553        rs7155384       A       G       .       PASS    AA=a;DP=118     GT:GQ:DP        1|0:100:23      0|0:92:32       1|0:100:45
+1      176756355       .       G       A       .       PASS    AA=G;DP=146     GT:GQ:DP        1|0:100:23      0|0:95:31       1|0:100:50
+2      15274178        rs35863258      G       A       .       PASS    AA=A;DP=102     GT:GQ:DP        1|0:100:23      0|0:95:32       1|0:100:44
+11     18994159        rs59985161      T       G       .       PASS    AA=T;DP=135     GT:GQ:DP        1|0:100:23      0|0:95:32       1|0:100:82
+3      89971154        rs1915742       T       A       .       PASS    AA=A;DP=113     GT:GQ:DP        1|0:100:23      0|0:98:32       1|0:100:57
+11     101070649       rs12270263      A       G       .       PASS    AA=A;DP=131     GT:GQ:DP        1|0:100:23      0|0:98:32       1|0:100:79
+8      89536283        rs821104        A       G       .       PASS    AA=G;DP=124     GT:GQ:DP        1|0:100:23      0|0:98:33       1|0:100:72
+7      157060284       rs221300        T       C       .       PASS    AA=T;DP=109     GT:GQ:DP        1|0:100:23      1|0:100:16      1|1:100:70
+8      55509701        rs4738881       A       G       .       PASS    AA=A;DP=82      GT:GQ:DP        1|0:100:23      1|0:100:16      1|1:75:27
+9      133174493       rs2260983       C       T       .       PASS    AA=C;DP=121     GT:GQ:DP        1|0:100:23      1|0:100:17      1|1:100:83
+5      136027128       rs11242339      T       A       .       PASS    AA=T;DP=85      GT:GQ:DP        1|0:100:23      1|0:100:18      1|1:100:45
+2      3668392 rs35107153      C       G       .       PASS    AA=C;DP=99      GT:GQ:DP        1|0:100:23      1|0:100:18      1|1:100:49
+2      171654818       rs10930455      T       C       .       PASS    AA=T;DP=95      GT:GQ:DP        1|0:100:23      1|0:100:18      1|1:100:54
+10     92289539        rs10458742      C       G       .       PASS    AA=G;DP=106     GT:GQ:DP        1|0:100:23      1|0:100:18      1|1:100:68
+17     17287463        .       T       A       .       PASS    AA=T;DP=113     GT:GQ:DP        1|0:100:23      1|0:100:18      1|1:100:73
+1      170642676       rs63178362      A       T       .       PASS    AA=T;DP=87;HM2  GT:GQ:DP        1|0:100:23      1|0:100:18      1|1:50:44
+1      62822407        rs12042319      G       A       .       PASS    AA=g;DP=86;HM2  GT:GQ:DP        1|0:100:23      1|0:100:18      1|1:91:42
+8      25276917        rs6557837       C       T       .       PASS    AA=C;DP=108     GT:GQ:DP        1|0:100:23      1|0:100:19      1|1:100:68
+2      177675687       rs2034164       A       C       .       PASS    AA=C;DP=84      GT:GQ:DP        1|0:100:23      1|0:100:19      1|1:75:34
+14     86021202        .       T       G       .       PASS    AA=T;DP=96      GT:GQ:DP        1|0:100:23      1|0:100:19      1|1:83:53
+1      236615428       rs12083152      T       A       .       PASS    AA=A;DP=83      GT:GQ:DP        1|0:100:23      1|0:100:19      1|1:88:42
+4      173160027       rs4692644       A       G       .       PASS    AA=A;DP=96      GT:GQ:DP        1|0:100:23      1|0:100:20      1|1:100:50
+9      110215687       .       T       C       .       PASS    AA=T;DP=101     GT:GQ:DP        1|0:100:23      1|0:100:20      1|1:100:57
+13     79197723        rs2039553       A       G       .       PASS    AA=A;DP=108     GT:GQ:DP        1|0:100:23      1|0:100:20      1|1:100:61
+6      168245785       .       G       A       .       PASS    AA=G;DP=105     GT:GQ:DP        1|0:100:23      1|0:100:20      1|1:100:63
+5      28358310        rs3890386       C       T       .       PASS    AA=C;DP=78      GT:GQ:DP        1|0:100:23      1|0:100:20      1|1:69:25
+13     77262030        rs914913        T       G       .       PASS    AA=T;DP=97      GT:GQ:DP        1|0:100:23      1|0:100:21      1|1:100:52
+4      91229943        rs6844776       A       C       .       PASS    AA=A;DP=116     GT:GQ:DP        1|0:100:23      1|0:100:21      1|1:100:74
+7      70743579        rs11971870      A       G       .       PASS    AA=A;DP=79      GT:GQ:DP        1|0:100:23      1|0:100:21      1|1:68:28
+8      141171921       .       C       G       .       PASS    AA=C;DP=108     GT:GQ:DP        1|0:100:23      1|0:100:22      1|1:100:66
+21     36627364        rs11911904      C       T       .       PASS    AA=C;DP=129     GT:GQ:DP        1|0:100:23      1|0:100:22      1|1:100:80
+18     62689094        rs4891579       A       T       .       PASS    AA=A;DP=82      GT:GQ:DP        1|0:100:23      1|0:100:22      1|1:78:27
+13     68564926        rs60806030      A       G       .       PASS    AA=a;DP=78      GT:GQ:DP        1|0:100:23      1|0:100:22      1|1:87:31
+5      150433059       rs6869605       A       C       .       PASS    AA=C;DP=119     GT:GQ:DP        1|0:100:23      1|0:100:23      1|1:100:74
+2      127111645       rs12993668      G       A       .       PASS    AA=A;DP=136     GT:GQ:DP        1|0:100:23      1|0:100:23      1|1:100:92
+17     248856  rs4567793       C       T       .       PASS    AA=C;DP=97      GT:GQ:DP        1|0:100:23      1|0:100:24      1|1:100:48
+2      145257905       rs4662394       G       T       .       PASS    AA=T;DP=97      GT:GQ:DP        1|0:100:23      1|0:100:24      1|1:100:50
+5      123465744       .       T       C       .       PASS    AA=T;DP=107     GT:GQ:DP        1|0:100:23      1|0:100:24      1|1:100:59
+1      176446880       rs963607        T       G       .       PASS    AA=T;DP=113;HM2;HM3     GT:GQ:DP        1|0:100:23      1|0:100:24      1|1:100:64
+21     20209475        rs2825888       G       C       .       PASS    AA=G;DP=101     GT:GQ:DP        1|0:100:23      1|0:100:25      1|1:100:53
+14     92751478        rs1263395       G       A       .       PASS    AA=G;DP=107     GT:GQ:DP        1|0:100:23      1|0:100:25      1|1:100:58
+7      31762381        rs6952967       G       A       .       PASS    AA=A;DP=119     GT:GQ:DP        1|0:100:23      1|0:100:25      1|1:100:72
+9      18826297        rs10963792      G       A       .       PASS    AA=A;DP=103     GT:GQ:DP        1|0:100:23      1|0:100:25      1|1:86:56
+18     39631394        rs12962775      G       A       .       PASS    AA=G;DP=94      GT:GQ:DP        1|0:100:23      1|0:100:25      1|1:92:45
+20     53247739        rs6069171       A       G       .       PASS    AA=a;DP=96      GT:GQ:DP        1|0:100:23      1|0:100:25      1|1:99:48
+4      11887781        .       T       C       .       PASS    AA=T;DP=112     GT:GQ:DP        1|0:100:23      1|0:100:26      1|1:100:62
+5      146697542       rs10042298      T       C       .       PASS    AA=T;DP=124     GT:GQ:DP        1|0:100:23      1|0:100:27      1|1:100:74
+7      53645687        rs6593092       T       C       .       PASS    AA=T;DP=124     GT:GQ:DP        1|0:100:23      1|0:100:27      1|1:100:74
+14     85830307        rs1952582       C       T       .       PASS    AA=T;DP=95      GT:GQ:DP        1|0:100:23      1|0:100:29      1|1:91:44
+16     18738610        rs8046761       T       C       .       PASS    AA=T;DP=114     GT:GQ:DP        1|0:100:23      1|0:100:30      1|1:100:56
+7      48574043        rs13245197      G       C       .       PASS    AA=C;DP=123     GT:GQ:DP        1|0:100:23      1|0:100:30      1|1:100:70
+4      186948725       rs62335686      C       A       .       PASS    AA=C;DP=109     GT:GQ:DP        1|0:100:23      1|0:100:37      1|1:100:49
+4      6438875 rs4490526       G       A       .       PASS    AA=G;DP=107     GT:GQ:DP        1|0:100:23      1|0:16:17       1|1:100:66
+16     8238697 rs4787163       A       G       .       PASS    AA=a;DP=98      GT:GQ:DP        1|0:100:23      1|0:34:16       1|1:53:59
+6      134419844       rs2492304       T       A       .       PASS    AA=T;DP=99      GT:GQ:DP        1|0:100:23      1|0:39:17       1|1:100:58
+1      246961920       .       G       A       .       PASS    AA=G;DP=83      GT:GQ:DP        1|0:100:23      1|0:43:12       1|1:100:40
+18     17211819        rs1992542       G       A       .       PASS    AA=A;DP=90      GT:GQ:DP        1|0:100:23      1|0:51:23       1|1:51:38
+11     6669306 rs60965695      T       C       .       PASS    AA=T;DP=86      GT:GQ:DP        1|0:100:23      1|0:63:16       1|1:100:48
+4      24737672        rs34898725      G       C       .       PASS    AA=G;DP=90      GT:GQ:DP        1|0:100:23      1|0:66:16       1|1:79:49
+13     34587816        rs7998688       G       A       .       PASS    AA=A;DP=70      GT:GQ:DP        1|0:100:23      1|0:67:10       1|1:93:32
+3      20136047        rs17006623      G       T       .       PASS    AA=G;DP=121     GT:GQ:DP        1|0:100:23      1|0:71:22       1|1:100:74
+17     21094745        rs11651892      C       G       .       PASS    AA=C;DP=109     GT:GQ:DP        1|0:100:23      1|0:82:13       1|1:100:72
+11     15222447        rs10832380      A       T       .       PASS    AA=A;DP=103     GT:GQ:DP        1|0:100:23      1|0:87:22       1|1:96:48
+13     66220698        rs12865964      T       G       .       PASS    AA=T;DP=71      GT:GQ:DP        1|0:100:23      1|0:97:15       1|1:75:26
+4      29776790        rs6815106       A       G       .       PASS    AA=G;DP=132     GT:GQ:DP        1|0:100:23      1|1:100:34      1|1:100:77
+3      162491421       rs6441371       C       A       .       PASS    AA=A;DP=76      GT:GQ:DP        1|0:100:23      1|1:13:15       1|1:95:35
+4      58070569        rs56001509      G       C       .       PASS    AA=C;DP=100     GT:GQ:DP        1|0:100:23      1|1:21:12       1|1:100:48
+10     16467050        .       T       G       .       PASS    AA=T;DP=107     GT:GQ:DP        1|0:100:23      1|1:23:22       1|1:100:64
+9      80390577        rs6420241       C       G       .       PASS    AA=G;DP=72      GT:GQ:DP        1|0:100:23      1|1:24:8        1|1:87:29
+5      82457121        rs6452508       A       G       .       PASS    AA=G;DP=76      GT:GQ:DP        1|0:100:23      1|1:27:10       1|1:87:33
+11     68600489        rs6591371       C       G       .       PASS    AA=G;DP=83      GT:GQ:DP        1|0:100:23      1|1:27:9        1|1:100:50
+2      30093838        rs4952178       A       T       .       PASS    AA=T;DP=85      GT:GQ:DP        1|0:100:23      1|1:27:9        1|1:100:51
+9      25382289        rs4480194       T       C       .       PASS    AA=t;DP=99      GT:GQ:DP        1|0:100:23      1|1:29:17       1|1:100:58
+6      39133860        rs1004280       A       G       .       PASS    AA=a;DP=103     GT:GQ:DP        1|0:100:23      1|1:30:10       1|1:100:69
+11     39114687        rs416912        C       T       .       PASS    AA=c;DP=87      GT:GQ:DP        1|0:100:23      1|1:30:10       1|1:86:54
+5      149001659       rs10064928      T       C       .       PASS    AA=T;DP=81      GT:GQ:DP        1|0:100:23      1|1:30:19       1|1:99:33
+6      162780109       rs7754380       A       G       .       PASS    AA=A;DP=114     GT:GQ:DP        1|0:100:23      1|1:30:21       1|1:100:68
+12     17778634        rs4290283       G       T       .       PASS    AA=T;DP=91      GT:GQ:DP        1|0:100:23      1|1:33:18       1|1:96:49
+18     75553387        rs9949776       G       C       .       PASS    AA=g;DP=130     GT:GQ:DP        1|0:100:23      1|1:33:19       1|1:100:42
+6      127779182       rs6914131       T       C       .       PASS    AA=-;DP=100     GT:GQ:DP        1|0:100:23      1|1:33:22       1|1:93:47
+15     90068593        rs11857442      G       A       .       PASS    AA=A;DP=85      GT:GQ:DP        1|0:100:23      1|1:36:12       1|1:100:42
+8      15262910        rs7825686       G       T       .       PASS    AA=T;DP=77      GT:GQ:DP        1|0:100:23      1|1:36:12       1|1:93:31
+2      102418638       rs2110734       C       T       .       PASS    AA=T;DP=98      GT:GQ:DP        1|0:100:23      1|1:36:23       1|1:100:53
+4      73161337        rs10033980      C       T       .       PASS    AA=.;DP=113     GT:GQ:DP        1|0:100:23      1|1:39:14       1|1:100:77
+15     90373513        rs11854488      G       C       .       PASS    AA=G;DP=81      GT:GQ:DP        1|0:100:23      1|1:42:14       1|1:100:36
+4      32218489        rs11725112      T       G       .       PASS    AA=G;DP=79      GT:GQ:DP        1|0:100:23      1|1:42:14       1|1:100:42
+14     36842814        rs10144336      A       T       .       PASS    AA=A;DP=86      GT:GQ:DP        1|0:100:23      1|1:42:14       1|1:100:49
+1      72914042        rs61224710      C       T       .       PASS    AA=C;DP=86      GT:GQ:DP        1|0:100:23      1|1:42:14       1|1:73:47
+2      47173796        rs10176665      T       C       .       PASS    AA=N;DP=92      GT:GQ:DP        1|0:100:23      1|1:42:15       1|1:100:53
+5      135529009       rs6866307       T       G       .       PASS    AA=G;DP=91      GT:GQ:DP        1|0:100:23      1|1:42:15       1|1:98:40
+18     73575277        rs2292062       C       G       .       PASS    AA=G;DP=86      GT:GQ:DP        1|0:100:23      1|1:42:17       1|1:100:48
+18     1153330 rs10459983      A       C       .       PASS    AA=A;DP=97      GT:GQ:DP        1|0:100:23      1|1:42:20       1|1:76:39
+11     44002848        rs7127683       T       C       .       PASS    AA=C;DP=97      GT:GQ:DP        1|0:100:23      1|1:45:15       1|1:100:59
+16     79119353        rs8055858       C       T       .       PASS    AA=T;DP=101     GT:GQ:DP        1|0:100:23      1|1:45:15       1|1:100:62
+3      136000791       rs11921721      T       C       .       PASS    AA=C;DP=108     GT:GQ:DP        1|0:100:23      1|1:45:15       1|1:100:71
+11     90866673        rs10765472      G       C       .       PASS    AA=C;DP=110     GT:GQ:DP        1|0:100:23      1|1:45:16       1|1:100:71
+4      48638158        rs2605255       C       T       .       PASS    AA=C;DP=79      GT:GQ:DP        1|0:100:23      1|1:45:16       1|1:90:30
+9      30336525        .       T       C       .       PASS    AA=T;DP=84      GT:GQ:DP        1|0:100:23      1|1:48:16       1|1:100:47
+22     16863230        rs9605487       A       G       .       PASS    AA=A;DP=75      GT:GQ:DP        1|0:100:23      1|1:48:16       1|1:84:29
+1      185587521       rs1148756       G       A       .       PASS    AA=G;DP=77      GT:GQ:DP        1|0:100:23      1|1:48:16       1|1:87:29
+4      30551638        rs7692914       T       G       .       PASS    AA=T;DP=89      GT:GQ:DP        1|0:100:23      1|1:48:16       1|1:93:49
+6      11929736        rs1033424       T       C       .       PASS    AA=C;DP=90      GT:GQ:DP        1|0:100:23      1|1:48:17       1|1:83:49
+4      181954885       rs1592802       T       G       .       PASS    AA=T;DP=109     GT:GQ:DP        1|0:100:23      1|1:50:22       1|1:100:63
+10     89478804        rs10887750      A       G       .       PASS    AA=G;DP=102     GT:GQ:DP        1|0:100:23      1|1:51:17       1|1:100:64
+4      25069594        rs1588789       G       T       .       PASS    AA=G;DP=108     GT:GQ:DP        1|0:100:23      1|1:51:17       1|1:100:66
+7      113382440       rs13227594      A       T       .       PASS    AA=T;DP=90      GT:GQ:DP        1|0:100:23      1|1:51:18       1|1:100:35
+6      33249231        rs9277932       T       G       .       PASS    AA=T;DP=99      GT:GQ:DP        1|0:100:23      1|1:51:18       1|1:100:56
+15     55120263        rs1820995       A       G       .       PASS    AA=A;DP=105     GT:GQ:DP        1|0:100:23      1|1:52:25       1|1:100:56
+17     44722535        rs3179840       T       G       .       PASS    AA=G;DP=119     GT:GQ:DP        1|0:100:23      1|1:52:26       1|1:100:69
+3      120488989       rs6800377       C       T       .       PASS    AA=T;DP=128     GT:GQ:DP        1|0:100:23      1|1:54:18       1|1:100:42
+14     40680906        rs2415732       T       A       .       PASS    AA=t;DP=96      GT:GQ:DP        1|0:100:23      1|1:54:18       1|1:100:55
+9      120537164       rs6478379       A       G       .       PASS    AA=G;DP=113     GT:GQ:DP        1|0:100:23      1|1:54:18       1|1:100:71
+11     28561053        rs11030382      C       T       .       PASS    AA=C;DP=87      GT:GQ:DP        1|0:100:23      1|1:57:19       1|1:83:45
+11     48556643        rs7481308       T       A       .       PASS    AA=-;DP=88      GT:GQ:DP        1|0:100:23      1|1:60:20       1|1:100:46
+5      165027266       rs262720        C       T       .       PASS    AA=T;DP=94      GT:GQ:DP        1|0:100:23      1|1:60:20       1|1:100:53
+3      118191255       rs10460823      G       A       .       PASS    AA=G;DP=100     GT:GQ:DP        1|0:100:23      1|1:60:20       1|1:100:58
+6      88229886        rs9450701       T       C       .       PASS    AA=C;DP=106     GT:GQ:DP        1|0:100:23      1|1:60:20       1|1:100:65
+20     7989815 rs6140515       A       G       .       PASS    AA=G;DP=86      GT:GQ:DP        1|0:100:23      1|1:60:20       1|1:87:31
+5      67599952        rs2161120       A       G       .       PASS    AA=G;DP=110     GT:GQ:DP        1|0:100:23      1|1:60:21       1|1:100:66
+1      18645558        rs2946532       T       C       .       PASS    AA=T;DP=112;HM2;HM3     GT:GQ:DP        1|0:100:23      1|1:61:26       1|1:100:66
+12     44851664        .       T       C       .       PASS    AA=T;DP=102     GT:GQ:DP        1|0:100:23      1|1:63:21       1|1:100:59
+1      70703618        rs7535568       C       T       .       PASS    AA=C;DP=87      GT:GQ:DP        1|0:100:23      1|1:63:21       1|1:96:32
+11     92653991        rs1900385       T       G       .       PASS    AA=T;DP=92      GT:GQ:DP        1|0:100:23      1|1:63:23       1|1:55:37
+6      62469081        rs16898995      T       C       .       PASS    AA=T;DP=91      GT:GQ:DP        1|0:100:23      1|1:66:22       1|1:100:35
+2      41794377        .       T       A       .       PASS    AA=T;DP=98      GT:GQ:DP        1|0:100:23      1|1:66:23       1|1:100:47
+2      34668257        rs1220210       A       C       .       PASS    AA=A;DP=106     GT:GQ:DP        1|0:100:23      1|1:66:23       1|1:100:60
+10     59684294        rs2790227       C       T       .       PASS    AA=C;DP=85      GT:GQ:DP        1|0:100:23      1|1:66:23       1|1:84:28
+21     21069400        rs9305974       T       G       .       PASS    AA=t;DP=94      GT:GQ:DP        1|0:100:23      1|1:66:24       1|1:100:49
+14     97927063        rs4905686       T       G       .       PASS    AA=A;DP=132     GT:GQ:DP        1|0:100:23      1|1:67:29       1|1:100:80
+16     5301268 rs12325398      A       G       .       PASS    AA=A;DP=94      GT:GQ:DP        1|0:100:23      1|1:69:24       1|1:100:41
+9      82331484        rs4877177       T       A       .       PASS    AA=N;DP=102     GT:GQ:DP        1|0:100:23      1|1:69:24       1|1:100:55
+3      120100449       rs1581374       C       A       .       PASS    AA=C;DP=92      GT:GQ:DP        1|0:100:23      1|1:69:24       1|1:95:45
+2      189310804       rs4667244       A       G       .       PASS    AA=G;DP=104     GT:GQ:DP        1|0:100:23      1|1:72:27       1|1:100:52
+7      7366005 rs10952052      T       C       .       PASS    AA=T;DP=104     GT:GQ:DP        1|0:100:23      1|1:73:28       1|1:76:41
+22     32460860        rs5994791       T       C       .       PASS    AA=T;DP=123     GT:GQ:DP        1|0:100:23      1|1:75:25       1|1:100:77
+1      184319794       rs10911813      C       T       .       PASS    AA=C;DP=106;HM2;HM3     GT:GQ:DP        1|0:100:23      1|1:76:33       1|1:67:49
+4      32182739        rs10035005      C       T       .       PASS    AA=C;DP=85      GT:GQ:DP        1|0:100:23      1|1:7:10        1|1:100:49
+8      94001877        rs7463093       G       A       .       PASS    AA=A;DP=105     GT:GQ:DP        1|0:100:23      1|1:81:27       1|1:100:56
+14     32700447        rs17100286      A       T       .       PASS    AA=T;DP=127     GT:GQ:DP        1|0:100:23      1|1:81:28       1|1:100:75
+9      78684053        rs12348969      A       G       .       PASS    AA=G;DP=110     GT:GQ:DP        1|0:100:23      1|1:87:29       1|1:100:57
+10     77286883        rs28429969      A       C       .       PASS    AA=A;DP=120     GT:GQ:DP        1|0:100:24      0|0:100:33      1|0:100:62
+3      148564026       rs13085449      C       G       .       PASS    AA=C;DP=98      GT:GQ:DP        1|0:100:24      0|0:100:34      1|0:100:41
+2      237864500       rs10175769      G       A       .       PASS    AA=G;DP=126     GT:GQ:DP        1|0:100:24      0|0:100:34      1|0:100:54
+14     97815294        rs7153578       A       G       .       PASS    AA=G;DP=129     GT:GQ:DP        1|0:100:24      0|0:100:35      1|0:100:70
+10     61228166        rs56330865      C       T       .       PASS    AA=C;DP=138     GT:GQ:DP        1|0:100:24      0|0:100:35      1|0:100:84
+9      22009317        rs55922618      C       T       .       PASS    AA=C;DP=147     GT:GQ:DP        1|0:100:24      0|0:100:36      1|0:100:44
+12     121403063       rs58928984      G       A       .       PASS    AA=G;DP=114     GT:GQ:DP        1|0:100:24      0|0:11:13       1|0:100:84
+4      40284119        .       G       C       .       PASS    AA=G;DP=101     GT:GQ:DP        1|0:100:24      0|0:21:17       1|0:100:60
+6      92679770        rs6933355       T       C       .       PASS    AA=T;DP=94      GT:GQ:DP        1|0:100:24      0|0:26:19       1|0:100:47
+14     83849665        .       C       T       .       PASS    AA=C;DP=107     GT:GQ:DP        1|0:100:24      0|0:29:15       1|0:100:70
+7      46301631        rs1385936       A       G       .       PASS    AA=G;DP=81      GT:GQ:DP        1|0:100:24      0|0:31:15       1|0:100:35
+2      49153594        .       T       C       .       PASS    AA=T;DP=114     GT:GQ:DP        1|0:100:24      0|0:32:21       1|0:100:64
+2      3247239 rs10168009      T       G       .       PASS    AA=T;DP=124     GT:GQ:DP        1|0:100:24      0|0:32:21       1|0:100:79
+18     39172952        .       G       T       .       PASS    AA=G;DP=102     GT:GQ:DP        1|0:100:24      0|0:33:27       1|0:100:51
+7      131225099       rs10234439      A       G       .       PASS    AA=G;DP=117     GT:GQ:DP        1|0:100:24      0|0:34:21       1|0:100:73
+13     107984971       rs60582548      A       G       .       PASS    AA=A;DP=109     GT:GQ:DP        1|0:100:24      0|0:35:11       1|0:100:75
+3      198349887       rs60832860      T       C       .       PASS    AA=T;DP=69      GT:GQ:DP        1|0:100:24      0|0:35:12       1|0:100:31
+11     65040907        .       G       A       .       PASS    AA=g;DP=86      GT:GQ:DP        1|0:100:24      0|0:35:12       1|0:100:51
+21     44173937        rs2070545       C       T       .       PASS    AA=C;DP=97      GT:GQ:DP        1|0:100:24      0|0:35:12       1|0:100:54
+12     128212100       rs7306089       C       T       .       PASS    AA=C;DP=102     GT:GQ:DP        1|0:100:24      0|0:35:12       1|0:100:69
+6      150420790       rs9479563       A       T       .       PASS    AA=A;DP=93      GT:GQ:DP        1|0:100:24      0|0:35:14       1|0:100:50
+6      72462304        rs1321835       C       T       .       PASS    AA=C;DP=133     GT:GQ:DP        1|0:100:24      0|0:35:14       1|0:100:96
+5      179265839       rs155795        G       C       .       PASS    AA=G;DP=99      GT:GQ:DP        1|0:100:24      0|0:37:16       1|0:100:57
+2      22822027        rs7421966       G       A       .       PASS    AA=g;DP=97      GT:GQ:DP        1|0:100:24      0|0:38:12       1|0:100:23
+2      238453407       .       G       A       .       PASS    AA=G;DP=95      GT:GQ:DP        1|0:100:24      0|0:38:12       1|0:100:59
+19     50906084        .       A       G       .       PASS    AA=A;DP=107     GT:GQ:DP        1|0:100:24      0|0:38:12       1|0:100:69
+1      80215135        rs61432086      C       T       .       PASS    AA=C;DP=80      GT:GQ:DP        1|0:100:24      0|0:38:13       1|0:100:46
+4      7377685 rs12503728      C       T       .       PASS    AA=C;DP=93      GT:GQ:DP        1|0:100:24      0|0:38:13       1|0:100:49
+20     4943473 .       C       T       .       PASS    AA=C;DP=88      GT:GQ:DP        1|0:100:24      0|0:38:13       1|0:100:52
+2      224320092       rs58872377      A       G       .       PASS    AA=A;DP=109     GT:GQ:DP        1|0:100:24      0|0:38:13       1|0:100:75
+12     21760063        .       A       T       .       PASS    AA=A;DP=97      GT:GQ:DP        1|0:100:24      0|0:38:14       1|0:100:58
+3      169337862       rs55744118      T       C       .       PASS    AA=T;DP=105     GT:GQ:DP        1|0:100:24      0|0:38:14       1|0:100:66
+2      97050282        .       A       G       .       PASS    AA=a;DP=91      GT:GQ:DP        1|0:100:24      0|0:38:21       1|0:100:46
+18     31578730        rs13380962      C       A       .       PASS    AA=C;DP=106     GT:GQ:DP        1|0:100:24      0|0:38:23       1|0:100:58
+11     11733998        .       G       T       .       PASS    AA=G;DP=118     GT:GQ:DP        1|0:100:24      0|0:38:23       1|0:100:73
+15     29224658        rs12148459      T       A       .       PASS    AA=A;DP=122     GT:GQ:DP        1|0:100:24      0|0:3:17        1|0:100:75
+11     4876720 .       C       G       .       PASS    AA=C;DP=104     GT:GQ:DP        1|0:100:24      0|0:40:18       1|0:100:63
+8      92074778        .       G       A       .       PASS    AA=G;DP=83      GT:GQ:DP        1|0:100:24      0|0:41:13       1|0:100:42
+1      68063178        .       C       T       .       PASS    AA=C;DP=97      GT:GQ:DP        1|0:100:24      0|0:41:14       1|0:100:32
+3      16623064        .       G       C       .       PASS    AA=G;DP=105     GT:GQ:DP        1|0:100:24      0|0:41:14       1|0:100:66
+4      4834900 .       C       T       .       PASS    AA=C;DP=92      GT:GQ:DP        1|0:100:24      0|0:41:15       1|0:100:41
+6      66337917        .       A       T       .       PASS    AA=A;DP=87      GT:GQ:DP        1|0:100:24      0|0:41:15       1|0:100:50
+10     118511729       .       C       A       .       PASS    AA=C;DP=110     GT:GQ:DP        1|0:100:24      0|0:41:15       1|0:100:73
+3      78224089        rs62256194      C       T       .       PASS    AA=C;DP=100     GT:GQ:DP        1|0:100:24      0|0:41:16       1|0:100:60
+18     66422088        rs58738329      A       G       .       PASS    AA=A;DP=99      GT:GQ:DP        1|0:100:24      0|0:42:20       1|0:100:47
+3      152131006       rs6440707       G       A       .       PASS    AA=G;DP=91      GT:GQ:DP        1|0:100:24      0|0:44:14       1|0:100:44
+2      116826245       rs13392304      T       C       .       PASS    AA=T;DP=85      GT:GQ:DP        1|0:100:24      0|0:44:14       1|0:100:48
+14     95996780        rs11845059      C       T       .       PASS    AA=C;DP=134     GT:GQ:DP        1|0:100:24      0|0:44:14       1|0:100:56
+5      40387473        rs7712308       A       G       .       PASS    AA=A;DP=95      GT:GQ:DP        1|0:100:24      0|0:44:14       1|0:100:57
+3      20190254        rs12497658      A       C       .       PASS    AA=A;DP=84      GT:GQ:DP        1|0:100:24      0|0:44:14       1|0:97:35
+22     42901056        rs9614360       G       A       .       PASS    AA=G;DP=102     GT:GQ:DP        1|0:100:24      0|0:44:15       1|0:100:54
+12     118200496       .       C       G       .       PASS    AA=C;DP=101     GT:GQ:DP        1|0:100:24      0|0:44:29       1|0:100:49
+2      32789580        .       C       T       .       PASS    AA=C;DP=108     GT:GQ:DP        1|0:100:24      0|0:46:26       1|0:100:58
+9      84087349        .       T       C       .       PASS    AA=T;DP=76      GT:GQ:DP        1|0:100:24      0|0:47:15       1|0:100:25
+20     7758020 .       A       C       .       PASS    AA=A;DP=87      GT:GQ:DP        1|0:100:24      0|0:47:15       1|0:100:47
+18     34741542        rs4396598       G       C       .       PASS    AA=C;DP=102     GT:GQ:DP        1|0:100:24      0|0:47:15       1|0:100:60
+7      113797401       rs2694944       C       T       .       PASS    AA=C;DP=101     GT:GQ:DP        1|0:100:24      0|0:47:15       1|0:100:65
+9      10696388        rs4590490       A       T       .       PASS    AA=T;DP=106     GT:GQ:DP        1|0:100:24      0|0:47:15       1|0:100:67
+16     86586797        .       T       C       .       PASS    AA=T;DP=112     GT:GQ:DP        1|0:100:24      0|0:47:15       1|0:100:73
+6      121483867       rs1273719       G       A       .       PASS    AA=G;DP=88      GT:GQ:DP        1|0:100:24      0|0:47:16       1|0:100:46
+2      163999110       rs12692691      C       G       .       PASS    AA=G;DP=102     GT:GQ:DP        1|0:100:24      0|0:48:21       1|0:100:55
+2      58019886        rs57143434      T       G       .       PASS    AA=T;DP=117     GT:GQ:DP        1|0:100:24      0|0:49:25       1|0:100:68
+3      117851436       .       C       A       .       PASS    AA=C;DP=110     GT:GQ:DP        1|0:100:24      0|0:49:26       1|0:100:60
+14     44413730        .       A       C       .       PASS    AA=A;DP=85      GT:GQ:DP        1|0:100:24      0|0:50:16       1|0:100:34
+6      1787761 rs12192948      C       T       .       PASS    AA=C;DP=85      GT:GQ:DP        1|0:100:24      0|0:50:16       1|0:100:34
+9      82486845        .       A       G       .       PASS    AA=A;DP=80      GT:GQ:DP        1|0:100:24      0|0:50:16       1|0:100:37
+10     20492000        .       A       G       .       PASS    AA=A;DP=81      GT:GQ:DP        1|0:100:24      0|0:50:16       1|0:100:41
+15     84793083        rs6496330       A       G       .       PASS    AA=A;DP=87      GT:GQ:DP        1|0:100:24      0|0:50:16       1|0:100:46
+5      53493113        rs806701        C       T       .       PASS    AA=T;DP=87      GT:GQ:DP        1|0:100:24      0|0:50:16       1|0:100:48
+2      26685585        .       G       A       .       PASS    AA=g;DP=104     GT:GQ:DP        1|0:100:24      0|0:50:16       1|0:100:49
+1      98690142        rs7556292       A       G       .       PASS    AA=A;DP=98      GT:GQ:DP        1|0:100:24      0|0:50:16       1|0:100:57
+2      126410715       rs7579432       A       G       .       PASS    AA=G;DP=106     GT:GQ:DP        1|0:100:24      0|0:50:16       1|0:100:66
+13     97439991        .       T       C       .       PASS    AA=T;DP=112     GT:GQ:DP        1|0:100:24      0|0:50:16       1|0:100:71
+3      48483970        rs3135945       G       A       .       PASS    AA=G;DP=117     GT:GQ:DP        1|0:100:24      0|0:50:16       1|0:100:76
+18     2686398 rs606868        T       C       .       PASS    AA=T;DP=101     GT:GQ:DP        1|0:100:24      0|0:50:17       1|0:100:59
+12     14289391        rs10772755      T       C       .       PASS    AA=T;DP=102     GT:GQ:DP        1|0:100:24      0|0:50:17       1|0:100:65
+16     7158301 .       C       G       .       PASS    AA=C;DP=107     GT:GQ:DP        1|0:100:24      0|0:50:17       1|0:100:65
+8      103662151       rs4454251       T       C       .       PASS    AA=T;DP=120     GT:GQ:DP        1|0:100:24      0|0:50:17       1|0:100:83
+9      86442269        rs7045967       G       T       .       PASS    AA=G;DP=85      GT:GQ:DP        1|0:100:24      0|0:51:23       1|0:100:26
+1      174967785       rs1506783       A       G       .       PASS    AA=A;DP=85      GT:GQ:DP        1|0:100:24      0|0:53:17       1|0:100:31
+19     22025608        rs440102        A       G       .       PASS    AA=G;DP=91      GT:GQ:DP        1|0:100:24      0|0:53:17       1|0:100:40
+1      163571265       .       A       G       .       PASS    AA=A;DP=88      GT:GQ:DP        1|0:100:24      0|0:53:17       1|0:100:47
+3      164902081       .       A       G       .       PASS    AA=A;DP=107     GT:GQ:DP        1|0:100:24      0|0:53:17       1|0:100:69
+12     57135174        rs3899425       C       T       .       PASS    AA=C;DP=113     GT:GQ:DP        1|0:100:24      0|0:53:17       1|0:100:70
+5      54954254        rs7724063       C       T       .       PASS    AA=C;DP=114     GT:GQ:DP        1|0:100:24      0|0:53:17       1|0:100:77
+13     34844029        rs2105174       C       T       .       PASS    AA=T;DP=115     GT:GQ:DP        1|0:100:24      0|0:53:18       1|0:100:36
+13     101680851       .       G       A       .       PASS    AA=G;DP=85      GT:GQ:DP        1|0:100:24      0|0:53:18       1|0:100:41
+1      36811495        rs35789532      C       T       .       PASS    AA=C;DP=96      GT:GQ:DP        1|0:100:24      0|0:53:18       1|0:100:46
+13     47059664        rs1326472       T       C       .       PASS    AA=T;DP=92      GT:GQ:DP        1|0:100:24      0|0:53:18       1|0:100:52
+12     108110617       rs2268401       C       T       .       PASS    AA=-;DP=102     GT:GQ:DP        1|0:100:24      0|0:53:18       1|0:100:59
+2      146436197       .       G       A       .       PASS    AA=G;DP=110     GT:GQ:DP        1|0:100:24      0|0:53:19       1|0:100:63
+3      109416288       rs56937459      A       T       .       PASS    AA=T;DP=86      GT:GQ:DP        1|0:100:24      0|0:56:18       1|0:100:31
+12     21491311        rs17682270      C       T       .       PASS    AA=C;DP=112     GT:GQ:DP        1|0:100:24      0|0:56:18       1|0:100:33
+5      10302136        .       T       C       .       PASS    AA=T;DP=95      GT:GQ:DP        1|0:100:24      0|0:56:18       1|0:100:52
+14     24418909        rs7161445       T       C       .       PASS    AA=G;DP=102     GT:GQ:DP        1|0:100:24      0|0:56:18       1|0:100:63
+7      41955093        rs6463080       G       A       .       PASS    AA=A;DP=80      GT:GQ:DP        1|0:100:24      0|0:56:19       1|0:100:37
+10     134622043       rs60652559      G       A       .       PASS    AA=A;DP=102     GT:GQ:DP        1|0:100:24      0|0:56:19       1|0:100:53
+8      89150846        rs2616490       T       C       .       PASS    AA=T;DP=116     GT:GQ:DP        1|0:100:24      0|0:56:19       1|0:100:69
+2      30649023        rs17009802      T       C       .       PASS    AA=T;DP=112     GT:GQ:DP        1|0:100:24      0|0:56:19       1|0:100:71
+5      62654302        .       A       G       .       PASS    AA=a;DP=127     GT:GQ:DP        1|0:100:24      0|0:56:19       1|0:100:84
+3      182716625       .       C       T       .       PASS    AA=C;DP=97      GT:GQ:DP        1|0:100:24      0|0:56:19       1|0:73:55
+1      12226686        .       T       C       .       PASS    AA=T;DP=113     GT:GQ:DP        1|0:100:24      0|0:56:20       1|0:100:66
+8      83522733        rs6473356       C       T       .       PASS    AA=T;DP=110     GT:GQ:DP        1|0:100:24      0|0:56:20       1|0:100:67
+2      113419639       .       C       G       .       PASS    AA=c;DP=117     GT:GQ:DP        1|0:100:24      0|0:56:24       1|0:100:69
+9      83261012        rs7875840       C       A       .       PASS    AA=C;DP=129     GT:GQ:DP        1|0:100:24      0|0:57:24       1|0:100:81
+4      90992823        rs12649704      A       T       .       PASS    AA=A;DP=129     GT:GQ:DP        1|0:100:24      0|0:57:30       1|0:100:69
+5      115150023       .       C       T       .       PASS    AA=C;DP=90      GT:GQ:DP        1|0:100:24      0|0:58:22       1|0:100:33
+21     19685713        .       C       T       .       PASS    AA=C;DP=83      GT:GQ:DP        1|0:100:24      0|0:59:19       1|0:100:28
+8      61278902        rs28624458      T       C       .       PASS    AA=C;DP=85      GT:GQ:DP        1|0:100:24      0|0:59:19       1|0:100:42
+5      38359516        rs7714025       T       C       .       PASS    AA=T;DP=88      GT:GQ:DP        1|0:100:24      0|0:59:19       1|0:100:44
+16     25367132        rs2214023       A       T       .       PASS    AA=a;DP=94      GT:GQ:DP        1|0:100:24      0|0:59:19       1|0:100:50
+8      88366474        rs10111906      C       T       .       PASS    AA=C;DP=94      GT:GQ:DP        1|0:100:24      0|0:59:19       1|0:100:51
+11     14925655        .       A       G       .       PASS    AA=G;DP=96      GT:GQ:DP        1|0:100:24      0|0:59:19       1|0:100:56
+22     34698501        .       T       C       .       PASS    AA=T;DP=100     GT:GQ:DP        1|0:100:24      0|0:59:19       1|0:100:56
+2      60052878        .       C       T       .       PASS    AA=C;DP=107     GT:GQ:DP        1|0:100:24      0|0:59:19       1|0:100:59
+22     44287105        .       G       T       .       PASS    AA=G;DP=103     GT:GQ:DP        1|0:100:24      0|0:59:19       1|0:100:60
+8      60283039        rs4400368       A       C       .       PASS    AA=A;DP=104     GT:GQ:DP        1|0:100:24      0|0:59:19       1|0:100:61
+16     47714600        .       T       C       .       PASS    AA=T;DP=99      GT:GQ:DP        1|0:100:24      0|0:59:20       1|0:100:54
+18     63588689        .       A       T       .       PASS    AA=A;DP=99      GT:GQ:DP        1|0:100:24      0|0:59:20       1|0:100:57
+20     58404943        rs2076865       A       T       .       PASS    AA=A;DP=104     GT:GQ:DP        1|0:100:24      0|0:59:20       1|0:100:61
+8      78310677        rs59557850      T       G       .       PASS    AA=T;DP=94      GT:GQ:DP        1|0:100:24      0|0:59:21       1|0:100:47
+5      7494005 .       A       G       .       PASS    AA=G;DP=108     GT:GQ:DP        1|0:100:24      0|0:59:25       1|0:100:58
+3      30669368        rs3773626       A       T       .       PASS    AA=A;DP=86      GT:GQ:DP        1|0:100:24      0|0:62:20       1|0:100:31
+13     100335145       .       T       A       .       PASS    AA=T;DP=86      GT:GQ:DP        1|0:100:24      0|0:62:20       1|0:100:42
+14     56575231        rs1189801       G       A       .       PASS    AA=A;DP=91      GT:GQ:DP        1|0:100:24      0|0:62:20       1|0:100:45
+2      187431206       .       A       G       .       PASS    AA=A;DP=88      GT:GQ:DP        1|0:100:24      0|0:62:20       1|0:100:46
+4      98901342        rs956424        A       C       .       PASS    AA=A;DP=96      GT:GQ:DP        1|0:100:24      0|0:62:20       1|0:100:51
+4      151109296       .       G       T       .       PASS    AA=T;DP=109     GT:GQ:DP        1|0:100:24      0|0:62:20       1|0:100:59
+3      83159835        rs1032020       T       A       .       PASS    AA=T;DP=107     GT:GQ:DP        1|0:100:24      0|0:62:20       1|0:100:60
+5      120636431       .       C       T       .       PASS    AA=C;DP=103     GT:GQ:DP        1|0:100:24      0|0:62:20       1|0:100:61
+10     15744177        rs10508491      C       G       .       PASS    AA=G;DP=108     GT:GQ:DP        1|0:100:24      0|0:62:20       1|0:100:66
+1      116381042       .       G       A       .       PASS    AA=G;DP=110     GT:GQ:DP        1|0:100:24      0|0:62:20       1|0:100:67
+18     63801130        rs61371805      T       C       .       PASS    AA=t;DP=114     GT:GQ:DP        1|0:100:24      0|0:62:20       1|0:100:73
+8      137722236       rs305348        A       G       .       PASS    AA=A;DP=116     GT:GQ:DP        1|0:100:24      0|0:62:20       1|0:100:73
+12     8557601 .       G       C       .       PASS    AA=G;DP=111     GT:GQ:DP        1|0:100:24      0|0:62:21       1|0:100:67
+4      156246751       rs17032489      C       A       .       PASS    AA=A;DP=113     GT:GQ:DP        1|0:100:24      0|0:62:21       1|0:100:70
+2      101514770       rs62156000      G       A       .       PASS    AA=G;DP=88      GT:GQ:DP        1|0:100:24      0|0:62:22       1|0:100:33
+12     75986087        rs7965677       A       G       .       PASS    AA=A;DP=93      GT:GQ:DP        1|0:100:24      0|0:62:22       1|0:100:35
+7      10002450        .       G       C       .       PASS    AA=G;DP=109     GT:GQ:DP        1|0:100:24      0|0:62:22       1|0:100:62
+3      40072415        rs9870050       A       G       .       PASS    AA=G;DP=125     GT:GQ:DP        1|0:100:24      0|0:62:22       1|0:100:72
+5      147643294       .       A       G       .       PASS    AA=a;DP=121     GT:GQ:DP        1|0:100:24      0|0:62:22       1|0:100:75
+11     100335650       rs7950832       T       C       .       PASS    AA=T;DP=111     GT:GQ:DP        1|0:100:24      0|0:62:23       1|0:100:62
+1      32654220        rs12138498      C       A       .       PASS    AA=C;DP=130;HM2 GT:GQ:DP        1|0:100:24      0|0:64:28       1|0:100:72
+13     70102824        .       T       C       .       PASS    AA=T;DP=90      GT:GQ:DP        1|0:100:24      0|0:65:21       1|0:100:37
+5      150110277       rs10056483      A       G       .       PASS    AA=G;DP=97      GT:GQ:DP        1|0:100:24      0|0:65:21       1|0:100:52
+12     80082618        rs7967713       C       G       .       PASS    AA=C;DP=100     GT:GQ:DP        1|0:100:24      0|0:65:21       1|0:100:55
+4      66664670        rs10866169      A       G       .       PASS    AA=A;DP=106     GT:GQ:DP        1|0:100:24      0|0:65:21       1|0:100:61
+2      27831094        .       A       G       .       PASS    AA=A;DP=112     GT:GQ:DP        1|0:100:24      0|0:65:21       1|0:100:68
+21     29298720        rs61680791      C       A       .       PASS    AA=C;DP=112     GT:GQ:DP        1|0:100:24      0|0:65:21       1|0:100:69
+3      194235465       rs1157624       C       A       .       PASS    AA=C;DP=122     GT:GQ:DP        1|0:100:24      0|0:65:21       1|0:100:75
+2      144616858       .       T       C       .       PASS    AA=C;DP=124     GT:GQ:DP        1|0:100:24      0|0:65:21       1|0:100:76
+4      82348472        rs58060390      G       A       .       PASS    AA=G;DP=131     GT:GQ:DP        1|0:100:24      0|0:65:21       1|0:100:76
+22     44425414        .       A       G       .       PASS    AA=A;DP=119     GT:GQ:DP        1|0:100:24      0|0:65:21       1|0:100:78
+4      119221679       rs11098425      C       T       .       PASS    AA=C;DP=107     GT:GQ:DP        1|0:100:24      0|0:65:22       1|0:100:49
+3      192195193       .       T       C       .       PASS    AA=T;DP=103     GT:GQ:DP        1|0:100:24      0|0:65:22       1|0:100:56
+14     51757256        .       C       T       .       PASS    AA=C;DP=101     GT:GQ:DP        1|0:100:24      0|0:65:22       1|0:100:57
+2      188192173       rs6743243       C       G       .       PASS    AA=c;DP=113     GT:GQ:DP        1|0:100:24      0|0:65:22       1|0:100:63
+7      33330949        .       C       T       .       PASS    AA=C;DP=106     GT:GQ:DP        1|0:100:24      0|0:65:22       1|0:100:63
+7      50527971        .       A       C       .       PASS    AA=A;DP=113     GT:GQ:DP        1|0:100:24      0|0:65:22       1|0:100:66
+4      62782161        rs17239317      T       G       .       PASS    AA=T;DP=101     GT:GQ:DP        1|0:100:24      0|0:66:28       1|0:100:46
+1      238213608       rs34281005      G       T       .       PASS    AA=G;DP=123     GT:GQ:DP        1|0:100:24      0|0:66:28       1|0:100:72
+18     60925854        rs176146        T       G       .       PASS    AA=G;DP=129     GT:GQ:DP        1|0:100:24      0|0:68:22       1|0:100:41
+5      90289918        rs60875962      G       T       .       PASS    AA=G;DP=89      GT:GQ:DP        1|0:100:24      0|0:68:22       1|0:100:42
+7      127204682       .       G       A       .       PASS    AA=G;DP=131     GT:GQ:DP        1|0:100:24      0|0:68:22       1|0:100:42
+3      122028402       rs12107541      G       A       .       PASS    AA=G;DP=105     GT:GQ:DP        1|0:100:24      0|0:68:22       1|0:100:47
+2      18476621        .       A       G       .       PASS    AA=A;DP=99      GT:GQ:DP        1|0:100:24      0|0:68:22       1|0:100:53
+17     25147925        .       C       T       .       PASS    AA=C;DP=96      GT:GQ:DP        1|0:100:24      0|0:68:23       1|0:100:50
+5      64175169        rs1433602       A       G       .       PASS    AA=G;DP=101     GT:GQ:DP        1|0:100:24      0|0:68:23       1|0:100:53
+13     31544210        rs461603        A       G       .       PASS    AA=A;DP=112     GT:GQ:DP        1|0:100:24      0|0:68:23       1|0:100:64
+2      12666269        rs11690604      C       T       .       PASS    AA=C;DP=95      GT:GQ:DP        1|0:100:24      0|0:68:24       1|0:100:50
+1      48788583        rs61143005      C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        1|0:100:24      0|0:68:25       1|0:100:67
+1      118760495       .       T       C       .       PASS    AA=T;DP=89      GT:GQ:DP        1|0:100:24      0|0:71:23       1|0:100:41
+6      103555557       .       C       T       .       PASS    AA=C;DP=102     GT:GQ:DP        1|0:100:24      0|0:71:23       1|0:100:55
+6      9520168 .       A       C       .       PASS    AA=A;DP=106     GT:GQ:DP        1|0:100:24      0|0:71:24       1|0:100:58
+1      205124018       .       T       G       .       PASS    AA=G;DP=110     GT:GQ:DP        1|0:100:24      0|0:71:29       1|0:100:55
+7      92858434        .       T       A       .       PASS    AA=T;DP=100     GT:GQ:DP        1|0:100:24      0|0:74:24       1|0:100:40
+15     22515598        rs7168758       A       G       .       PASS    AA=A;DP=106     GT:GQ:DP        1|0:100:24      0|0:74:24       1|0:100:55
+11     105152378       .       T       C       .       PASS    AA=T;DP=121     GT:GQ:DP        1|0:100:24      0|0:74:24       1|0:100:60
+12     37097465        rs12578148      G       T       .       PASS    AA=G;DP=106     GT:GQ:DP        1|0:100:24      0|0:74:24       1|0:100:63
+4      102821667       rs6820207       G       A       .       PASS    AA=A;DP=111     GT:GQ:DP        1|0:100:24      0|0:74:24       1|0:100:66
+2      51488701        rs4496363       A       G       .       PASS    AA=a;DP=113     GT:GQ:DP        1|0:100:24      0|0:74:24       1|0:100:67
+2      43113413        rs35025304      A       G       .       PASS    AA=A;DP=141     GT:GQ:DP        1|0:100:24      0|0:74:25       1|0:100:48
+4      12147312        rs58099533      G       T       .       PASS    AA=G;DP=105     GT:GQ:DP        1|0:100:24      0|0:74:25       1|0:100:56
+11     26045321        .       C       T       .       PASS    AA=T;DP=109     GT:GQ:DP        1|0:100:24      0|0:74:25       1|0:100:61
+1      97326547        .       C       T       .       PASS    AA=C;DP=123     GT:GQ:DP        1|0:100:24      0|0:74:25       1|0:100:74
+4      5022992 rs10223021      T       C       .       PASS    AA=C;DP=133     GT:GQ:DP        1|0:100:24      0|0:74:25       1|0:100:88
+15     89823712        rs7183234       G       C       .       PASS    AA=C;DP=110     GT:GQ:DP        1|0:100:24      0|0:75:30       1|0:100:57
+7      43132321        .       T       C       .       PASS    AA=T;DP=113     GT:GQ:DP        1|0:100:24      0|0:75:31       1|0:100:62
+10     63039438        .       G       A       .       PASS    AA=A;DP=123     GT:GQ:DP        1|0:100:24      0|0:76:31       1|0:100:70
+16     51758579        .       C       A       .       PASS    AA=A;DP=112     GT:GQ:DP        1|0:100:24      0|0:76:32       1|0:100:57
+8      138089984       rs60290365      C       T       .       PASS    AA=C;DP=134     GT:GQ:DP        1|0:100:24      0|0:77:25       1|0:100:32
+11     95329611        rs728333        T       G       .       PASS    AA=G;DP=98      GT:GQ:DP        1|0:100:24      0|0:77:25       1|0:100:50
+2      213224516       rs7582674       A       T       .       PASS    AA=A;DP=103     GT:GQ:DP        1|0:100:24      0|0:77:25       1|0:100:52
+1      72453300        .       G       A       .       PASS    AA=G;DP=100     GT:GQ:DP        1|0:100:24      0|0:77:25       1|0:100:53
+6      32826995        rs9276496       G       A       .       PASS    AA=a;DP=103     GT:GQ:DP        1|0:100:24      0|0:77:25       1|0:100:54
+21     25140010        rs6516637       C       T       .       PASS    AA=T;DP=111     GT:GQ:DP        1|0:100:24      0|0:77:25       1|0:100:61
+4      117110629       rs28686943      T       C       .       PASS    AA=T;DP=104     GT:GQ:DP        1|0:100:24      0|0:77:26       1|0:100:57
+6      72647770        rs2185875       G       A       .       PASS    AA=G;DP=113     GT:GQ:DP        1|0:100:24      0|0:77:27       1|0:100:64
+11     104254259       .       G       A       .       PASS    AA=G;DP=148     GT:GQ:DP        1|0:100:24      0|0:77:27       1|0:100:93
+10     122991722       rs7922045       C       T       .       PASS    AA=C;DP=119     GT:GQ:DP        1|0:100:24      0|0:77:29       1|0:100:66
+18     10356080        .       A       G       .       PASS    AA=A;DP=118     GT:GQ:DP        1|0:100:24      0|0:77:32       1|0:100:63
+14     88028241        rs56917971      C       T       .       PASS    AA=T;DP=120     GT:GQ:DP        1|0:100:24      0|0:77:37       1|0:100:58
+2      214353030       rs2114638       G       A       .       PASS    AA=G;DP=102     GT:GQ:DP        1|0:100:24      0|0:80:26       1|0:100:51
+3      26492843        rs17207 C       A       .       PASS    AA=A;DP=114     GT:GQ:DP        1|0:100:24      0|0:80:26       1|0:100:66
+1      151270628       rs2070963       G       A       .       PASS    AA=A;DP=123     GT:GQ:DP        1|0:100:24      0|0:80:26       1|0:100:67
+4      63813676        rs17083517      A       T       .       PASS    AA=A;DP=124     GT:GQ:DP        1|0:100:24      0|0:80:26       1|0:100:70
+5      21004521        .       A       C       .       PASS    AA=C;DP=131     GT:GQ:DP        1|0:100:24      0|0:80:26       1|0:100:83
+9      119935207       .       T       G       .       PASS    AA=T;DP=137     GT:GQ:DP        1|0:100:24      0|0:80:26       1|0:100:86
+8      83650164        .       G       A       .       PASS    AA=G;DP=117     GT:GQ:DP        1|0:100:24      0|0:80:27       1|0:100:60
+4      53351650        rs5012592       C       T       .       PASS    AA=C;DP=114     GT:GQ:DP        1|0:100:24      0|0:80:27       1|0:100:61
+4      142944328       .       G       A       .       PASS    AA=G;DP=129     GT:GQ:DP        1|0:100:24      0|0:80:27       1|0:100:77
+3      147833036       rs342938        C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        1|0:100:24      0|0:80:28       1|0:100:52
+18     41462703        rs58555924      G       A       .       PASS    AA=A;DP=129     GT:GQ:DP        1|0:100:24      0|0:80:28       1|0:100:78
+5      142350187       rs245719        C       A       .       PASS    AA=A;DP=112     GT:GQ:DP        1|0:100:24      0|0:83:27       1|0:100:61
+6      71962728        .       G       T       .       PASS    AA=G;DP=119     GT:GQ:DP        1|0:100:24      0|0:83:27       1|0:100:70
+7      122997764       .       A       G       .       PASS    AA=A;DP=122     GT:GQ:DP        1|0:100:24      0|0:83:27       1|0:100:75
+10     131120374       .       C       T       .       PASS    AA=C;DP=118     GT:GQ:DP        1|0:100:24      0|0:83:28       1|0:100:69
+15     95921600        .       C       T       .       PASS    AA=T;DP=112     GT:GQ:DP        1|0:100:24      0|0:83:29       1|0:100:62
+4      13977725        .       C       T       .       PASS    AA=c;DP=139     GT:GQ:DP        1|0:100:24      0|0:84:34       1|0:100:81
+9      19047599        .       T       G       .       PASS    AA=T;DP=133     GT:GQ:DP        1|0:100:24      0|0:85:34       1|0:100:77
+21     19836891        .       T       A       .       PASS    AA=T;DP=97      GT:GQ:DP        1|0:100:24      0|0:86:28       1|0:100:41
+3      73457900        rs17010909      A       T       .       PASS    AA=A;DP=119     GT:GQ:DP        1|0:100:24      0|0:86:28       1|0:100:66
+7      3927016 rs7789580       A       G       .       PASS    AA=A;DP=118     GT:GQ:DP        1|0:100:24      0|0:86:28       1|0:100:66
+9      28801361        .       T       A       .       PASS    AA=T;DP=120     GT:GQ:DP        1|0:100:24      0|0:86:28       1|0:100:69
+10     122185931       rs12769762      G       A       .       PASS    AA=G;DP=136     GT:GQ:DP        1|0:100:24      0|0:86:28       1|0:100:84
+5      7887760 rs34384504      C       T       .       PASS    AA=C;DP=104     GT:GQ:DP        1|0:100:24      0|0:86:29       1|0:100:40
+3      177031727       rs11921840      G       T       .       PASS    AA=-;DP=125     GT:GQ:DP        1|0:100:24      0|0:86:29       1|0:100:71
+6      18532705        rs60677989      A       G       .       PASS    AA=A;DP=136     GT:GQ:DP        1|0:100:24      0|0:87:37       1|0:100:78
+5      27683088        rs10051129      T       C       .       PASS    AA=T;DP=109     GT:GQ:DP        1|0:100:24      0|0:89:29       1|0:100:54
+13     61400042        rs1332387       A       G       .       PASS    AA=A;DP=110     GT:GQ:DP        1|0:100:24      0|0:89:29       1|0:100:57
+6      75293637        rs16885004      T       C       .       PASS    AA=t;DP=130     GT:GQ:DP        1|0:100:24      0|0:89:29       1|0:100:79
+18     67614490        .       G       C       .       PASS    AA=G;DP=127     GT:GQ:DP        1|0:100:24      0|0:89:30       1|0:100:77
+3      6741178 rs978658        A       G       .       PASS    AA=A;DP=132     GT:GQ:DP        1|0:100:24      0|0:92:30       1|0:100:73
+9      80593353        rs11137838      T       C       .       PASS    AA=C;DP=128     GT:GQ:DP        1|0:100:24      0|0:92:30       1|0:91:36
+7      93893406        rs41317737      T       A       .       PASS    AA=A;DP=111     GT:GQ:DP        1|0:100:24      0|0:92:31       1|0:100:41
+3      3214228 rs1672734       T       C       .       PASS    AA=T;DP=110     GT:GQ:DP        1|0:100:24      0|0:95:31       1|0:100:51
+17     50305936        .       A       G       .       PASS    AA=A;DP=124     GT:GQ:DP        1|0:100:24      0|0:95:31       1|0:100:71
+1      212796947       rs11120353      G       T       .       PASS    AA=G;DP=135;HM3 GT:GQ:DP        1|0:100:24      0|0:95:31       1|0:100:82
+13     105477202       .       A       G       .       PASS    AA=A;DP=100     GT:GQ:DP        1|0:100:24      0|0:95:32       1|0:100:44
+16     52651405        .       A       G       .       PASS    AA=A;DP=121     GT:GQ:DP        1|0:100:24      0|0:95:32       1|0:100:65
+5      109389689       rs6869543       T       A       .       PASS    AA=A;DP=137     GT:GQ:DP        1|0:100:24      0|0:95:32       1|0:100:82
+11     37764895        rs7105500       C       G       .       PASS    AA=C;DP=143     GT:GQ:DP        1|0:100:24      0|0:95:32       1|0:100:89
+5      21620993        rs515853        A       C       .       PASS    AA=A;DP=157     GT:GQ:DP        1|0:100:24      0|0:97:38       1|0:100:94
+15     61545481        rs4984246       G       T       .       PASS    AA=T;DP=119     GT:GQ:DP        1|0:100:24      0|0:98:32       1|0:100:63
+6      22327982        .       G       C       .       PASS    AA=g;DP=126     GT:GQ:DP        1|0:100:24      0|0:98:32       1|0:100:73
+5      106954434       .       A       G       .       PASS    AA=A;DP=138     GT:GQ:DP        1|0:100:24      0|0:98:32       1|0:100:81
+12     89784689        rs11105849      A       G       .       PASS    AA=a;DP=112     GT:GQ:DP        1|0:100:24      0|0:98:33       1|0:100:55
+7      91066899        rs2710984       G       A       .       PASS    AA=A;DP=116     GT:GQ:DP        1|0:100:24      0|0:98:33       1|0:100:63
+16     86305790        rs12928911      G       A       .       PASS    AA=G;DP=94      GT:GQ:DP        1|0:100:24      0|0:9:11        1|0:100:55
+6      18459735        rs9396853       A       G       .       PASS    AA=G;DP=108     GT:GQ:DP        1|0:100:24      1|0:100:13      1|1:100:74
+3      60245594        rs9849856       G       A       .       PASS    AA=N;DP=88      GT:GQ:DP        1|0:100:24      1|0:100:16      1|1:100:51
+5      44939787        rs9791164       A       G       .       PASS    AA=A;DP=93      GT:GQ:DP        1|0:100:24      1|0:100:16      1|1:100:53
+6      96741144        rs9322719       C       A       .       PASS    AA=C;DP=89      GT:GQ:DP        1|0:100:24      1|0:100:16      1|1:72:25
+11     47406914        rs35496532      C       T       .       PASS    AA=C;DP=116     GT:GQ:DP        1|0:100:24      1|0:100:17      1|1:100:76
+4      89132965        rs58408285      T       G       .       PASS    AA=T;DP=72      GT:GQ:DP        1|0:100:24      1|0:100:17      1|1:75:26
+19     62121003        rs60139623      A       G       .       PASS    AA=G;DP=88      GT:GQ:DP        1|0:100:24      1|0:100:17      1|1:78:47
+3      150871288       rs12490239      A       G       .       PASS    AA=G;DP=89      GT:GQ:DP        1|0:100:24      1|0:100:18      1|1:100:39
+18     16925970        .       T       G       .       PASS    AA=T;DP=105     GT:GQ:DP        1|0:100:24      1|0:100:18      1|1:100:65
+4      115259628       rs12499066      G       A       .       PASS    AA=G;DP=108     GT:GQ:DP        1|0:100:24      1|0:100:19      1|1:100:64
+9      14965341        .       C       G       .       PASS    AA=C;DP=89      GT:GQ:DP        1|0:100:24      1|0:100:19      1|1:99:34
+22     25860318        rs5752495       A       T       .       PASS    AA=A;DP=105     GT:GQ:DP        1|0:100:24      1|0:100:20      1|1:100:62
+8      109089111       rs6469153       T       C       .       PASS    AA=t;DP=103     GT:GQ:DP        1|0:100:24      1|0:100:21      1|1:100:55
+10     16794498        rs7087428       C       A       .       PASS    AA=A;DP=103     GT:GQ:DP        1|0:100:24      1|0:100:21      1|1:100:59
+6      52721018        rs6904935       C       T       .       PASS    AA=C;DP=114     GT:GQ:DP        1|0:100:24      1|0:100:21      1|1:100:69
+11     24189708        rs4595541       G       A       .       PASS    AA=G;DP=115     GT:GQ:DP        1|0:100:24      1|0:100:21      1|1:100:73
+2      46341164        rs4146905       G       C       .       PASS    AA=C;DP=105     GT:GQ:DP        1|0:100:24      1|0:100:23      1|1:100:59
+5      35589152        rs286421        A       G       .       PASS    AA=G;DP=112     GT:GQ:DP        1|0:100:24      1|0:100:23      1|1:100:65
+16     85220390        rs889597        T       C       .       PASS    AA=N;DP=144     GT:GQ:DP        1|0:100:24      1|0:100:23      1|1:100:87
+1      209814525       rs7531277       A       T       .       PASS    AA=A;DP=76      GT:GQ:DP        1|0:100:24      1|0:100:23      1|1:69:24
+2      213188183       rs16848927      C       T       .       PASS    AA=C;DP=98      GT:GQ:DP        1|0:100:24      1|0:100:24      1|1:100:51
+7      52932443        rs61189367      T       C       .       PASS    AA=C;DP=105     GT:GQ:DP        1|0:100:24      1|0:100:24      1|1:100:55
+12     125009693       rs11058405      T       C       .       PASS    AA=T;DP=123     GT:GQ:DP        1|0:100:24      1|0:100:24      1|1:100:72
+2      70203874        rs7584506       C       G       .       PASS    AA=G;DP=132     GT:GQ:DP        1|0:100:24      1|0:100:24      1|1:100:85
+7      12088550        rs7784069       C       T       .       PASS    AA=T;DP=107     GT:GQ:DP        1|0:100:24      1|0:100:24      1|1:97:46
+3      86349840        rs1512926       T       C       .       PASS    AA=T;DP=95      GT:GQ:DP        1|0:100:24      1|0:100:25      1|1:100:46
+2      173883528       rs6760649       G       A       .       PASS    AA=G;DP=98      GT:GQ:DP        1|0:100:24      1|0:100:25      1|1:100:50
+4      71928857        rs55823915      G       A       .       PASS    AA=G;DP=113     GT:GQ:DP        1|0:100:24      1|0:100:25      1|1:100:66
+8      133650803       rs4506192       A       G       .       PASS    AA=G;DP=118     GT:GQ:DP        1|0:100:24      1|0:100:25      1|1:100:68
+4      88718523        .       T       C       .       PASS    AA=T;DP=127     GT:GQ:DP        1|0:100:24      1|0:100:25      1|1:100:80
+11     126917063       rs11220967      G       A       .       PASS    AA=G;DP=96      GT:GQ:DP        1|0:100:24      1|0:100:25      1|1:72:34
+13     52286136        rs9527017       G       C       .       PASS    AA=G;DP=124     GT:GQ:DP        1|0:100:24      1|0:100:26      1|1:100:76
+11     81229069        .       T       G       .       PASS    AA=T;DP=105     GT:GQ:DP        1|0:100:24      1|0:100:26      1|1:82:40
+11     104284405       rs478650        T       G       .       PASS    AA=G;DP=101     GT:GQ:DP        1|0:100:24      1|0:100:27      1|1:100:39
+9      86782241        rs59522990      C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        1|0:100:24      1|0:100:27      1|1:100:62
+3      7834556 rs11925932      C       T       .       PASS    AA=C;DP=124     GT:GQ:DP        1|0:100:24      1|0:100:27      1|1:100:69
+15     36134769        rs2382075       A       G       .       PASS    AA=A;DP=112     GT:GQ:DP        1|0:100:24      1|0:100:30      1|1:100:59
+2      62421550        rs61228784      G       T       .       PASS    AA=T;DP=115     GT:GQ:DP        1|0:100:24      1|0:100:30      1|1:100:59
+4      35718215        .       T       A       .       PASS    AA=T;DP=125     GT:GQ:DP        1|0:100:24      1|0:100:32      1|1:100:69
+14     36127793        rs17104778      A       G       .       PASS    AA=A;DP=128     GT:GQ:DP        1|0:100:24      1|0:100:36      1|1:100:68
+13     50897857        .       C       G       .       PASS    AA=C;DP=134     GT:GQ:DP        1|0:100:24      1|0:100:39      1|1:100:60
+3      117965527       rs9853588       G       A       .       PASS    AA=G;DP=125     GT:GQ:DP        1|0:100:24      1|0:100:39      1|1:100:63
+10     91463867        rs11185853      G       A       .       PASS    AA=G;DP=82      GT:GQ:DP        1|0:100:24      1|0:21:15       1|1:86:44
+5      27296793        .       G       A       .       PASS    AA=G;DP=99      GT:GQ:DP        1|0:100:24      1|0:25:16       1|1:83:59
+11     45783626        rs12289963      G       C       .       PASS    AA=G;DP=98      GT:GQ:DP        1|0:100:24      1|0:32:7        1|1:100:65
+4      61106368        rs1347890       T       C       .       PASS    AA=T;DP=84      GT:GQ:DP        1|0:100:24      1|0:40:18       1|1:100:40
+8      125333298       rs6989670       C       T       .       PASS    AA=C;DP=108     GT:GQ:DP        1|0:100:24      1|0:45:12       1|1:100:74
+6      11347105        rs9468690       G       A       .       PASS    AA=G;DP=115     GT:GQ:DP        1|0:100:24      1|0:51:16       1|1:100:76
+13     111036864       rs2039916       A       C       .       PASS    AA=C;DP=84      GT:GQ:DP        1|0:100:24      1|0:53:9        1|1:100:47
+7      144360998       rs7796468       C       T       .       PASS    AA=C;DP=90      GT:GQ:DP        1|0:100:24      1|0:59:16       1|1:57:40
+21     39892537        rs2837095       G       A       .       PASS    AA=G;DP=108     GT:GQ:DP        1|0:100:24      1|0:59:19       1|1:100:68
+3      141920304       rs2017283       C       T       .       PASS    AA=T;DP=92      GT:GQ:DP        1|0:100:24      1|0:61:15       1|1:87:42
+21     18202215        rs8132868       A       T       .       PASS    AA=A;DP=83      GT:GQ:DP        1|0:100:24      1|0:66:18       1|1:64:34
+20     7392946 rs6055017       A       T       .       PASS    AA=N;DP=98      GT:GQ:DP        1|0:100:24      1|0:68:18       1|1:100:57
+15     77563867        .       G       C       .       PASS    AA=G;DP=82      GT:GQ:DP        1|0:100:24      1|0:72:14       1|1:98:45
+16     80932365        rs11150458      T       C       .       PASS    AA=C;DP=91      GT:GQ:DP        1|0:100:24      1|0:73:13       1|1:100:52
+4      16921157        rs2872793       A       C       .       PASS    AA=C;DP=99      GT:GQ:DP        1|0:100:24      1|0:77:20       1|1:100:61
+3      124815236       rs6438805       C       G       .       PASS    AA=c;DP=82      GT:GQ:DP        1|0:100:24      1|0:79:12       1|1:100:47
+8      51913466        .       A       T       .       PASS    AA=A;DP=95      GT:GQ:DP        1|0:100:24      1|0:81:13       1|1:99:56
+4      3800602 rs34923422      A       G       .       PASS    AA=G;DP=88      GT:GQ:DP        1|0:100:24      1|0:82:13       1|1:100:40
+3      194139149       rs2593882       C       T       .       PASS    AA=C;DP=103     GT:GQ:DP        1|0:100:24      1|0:85:19       1|1:100:58
+3      130776663       rs11923853      T       C       .       PASS    AA=C;DP=112     GT:GQ:DP        1|0:100:24      1|0:92:17       1|1:100:75
+19     42577343        rs10421436      T       C       .       PASS    AA=C;DP=105     GT:GQ:DP        1|0:100:24      1|0:92:21       1|1:100:60
+2      228883850       rs11693484      T       C       .       PASS    AA=T;DP=96      GT:GQ:DP        1|0:100:24      1|0:93:23       1|1:100:49
+13     111079997       rs8001334       A       C       .       PASS    AA=C;DP=97      GT:GQ:DP        1|0:100:24      1|0:94:19       1|1:100:43
+14     44045356        rs3809429       G       T       .       PASS    AA=G;DP=110     GT:GQ:DP        1|0:100:24      1|0:94:26       1|1:100:60
+1      234852431       rs1773418       C       A       .       PASS    AA=C;DP=125;HM2 GT:GQ:DP        1|0:100:24      1|0:95:26       1|1:100:65
+13     37248683        rs989060        T       A       .       PASS    AA=t;DP=109     GT:GQ:DP        1|0:100:24      1|0:97:18       1|1:100:60
+6      104707566       rs34252434      G       T       .       PASS    AA=G;DP=104     GT:GQ:DP        1|0:100:24      1|1:20:21       1|1:100:61
+22     48443492        rs61144107      G       A       .       PASS    AA=g;DP=72      GT:GQ:DP        1|0:100:24      1|1:21:12       1|1:72:24
+7      147210769       rs2710096       T       G       .       PASS    AA=G;DP=77      GT:GQ:DP        1|0:100:24      1|1:23:13       1|1:90:30
+19     5429444 rs60896273      T       C       .       PASS    AA=T;DP=107     GT:GQ:DP        1|0:100:24      1|1:30:11       1|1:100:71
+8      16619329        rs866064        T       G       .       PASS    AA=G;DP=92      GT:GQ:DP        1|0:100:24      1|1:30:22       1|1:69:47
+7      48483405        rs10249768      C       G       .       PASS    AA=G;DP=105     GT:GQ:DP        1|0:100:24      1|1:33:12       1|1:100:69
+19     33176516        rs4805012       T       C       .       PASS    AA=t;DP=100     GT:GQ:DP        1|0:100:24      1|1:34:22       1|1:100:52
+5      45816507        rs4388219       A       G       .       PASS    AA=G;DP=92      GT:GQ:DP        1|0:100:24      1|1:36:12       1|1:100:56
+9      99147705        rs10122063      G       A       .       PASS    AA=A;DP=84      GT:GQ:DP        1|0:100:24      1|1:38:20       1|1:95:37
+17     32404700        rs9944453       A       G       .       PASS    AA=a;DP=83      GT:GQ:DP        1|0:100:24      1|1:39:14       1|1:100:36
+4      158709946       rs6833009       G       T       .       PASS    AA=A;DP=100     GT:GQ:DP        1|0:100:24      1|1:39:23       1|1:100:53
+3      4780536 rs3805010       A       G       .       PASS    AA=A;DP=104     GT:GQ:DP        1|0:100:24      1|1:42:14       1|1:100:66
+10     79972380        rs2593152       C       T       .       PASS    AA=C;DP=84      GT:GQ:DP        1|0:100:24      1|1:42:14       1|1:84:34
+1      84904570        rs3096445       T       G       .       PASS    AA=G;DP=103;HM2 GT:GQ:DP        1|0:100:24      1|1:44:22       1|1:93:55
+6      137773637       rs10484596      A       G       .       PASS    AA=A;DP=97      GT:GQ:DP        1|0:100:24      1|1:45:15       1|1:100:59
+2      145068886       rs12478108      G       A       .       PASS    AA=A;DP=98      GT:GQ:DP        1|0:100:24      1|1:45:16       1|1:100:59
+6      88077392        rs60182652      G       A       .       PASS    AA=G;DP=108     GT:GQ:DP        1|0:100:24      1|1:45:17       1|1:100:64
+12     21375601        rs7978981       T       C       .       PASS    AA=C;DP=97      GT:GQ:DP        1|0:100:24      1|1:47:23       1|1:100:50
+5      30432978        rs6450771       T       C       .       PASS    AA=C;DP=101     GT:GQ:DP        1|0:100:24      1|1:48:16       1|1:100:56
+7      7442128 .       A       C       .       PASS    AA=A;DP=110     GT:GQ:DP        1|0:100:24      1|1:49:20       1|1:100:59
+21     19761667        rs723415        C       G       .       PASS    AA=G;DP=115     GT:GQ:DP        1|0:100:24      1|1:51:17       1|1:100:70
+2      128649701       rs6728923       C       T       .       PASS    AA=T;DP=112     GT:GQ:DP        1|0:100:24      1|1:51:17       1|1:100:72
+6      84329852        rs6454334       G       A       .       PASS    AA=G;DP=113     GT:GQ:DP        1|0:100:24      1|1:51:26       1|1:100:63
+2      123914437       rs1852241       G       A       .       PASS    AA=G;DP=95      GT:GQ:DP        1|0:100:24      1|1:54:18       1|1:100:54
+18     22975929        rs1863630       G       T       .       PASS    AA=T;DP=95      GT:GQ:DP        1|0:100:24      1|1:57:19       1|1:100:52
+3      74608361        rs9826396       G       A       .       PASS    AA=G;DP=119     GT:GQ:DP        1|0:100:24      1|1:57:19       1|1:100:60
+3      144859179       rs1242061       T       C       .       PASS    AA=T;DP=109     GT:GQ:DP        1|0:100:24      1|1:57:19       1|1:100:66
+4      77011413        rs9884389       G       A       .       PASS    AA=A;DP=90      GT:GQ:DP        1|0:100:24      1|1:57:20       1|1:100:34
+20     38065183        rs2870135       A       G       .       PASS    AA=G;DP=90      GT:GQ:DP        1|0:100:24      1|1:57:20       1|1:100:46
+5      115751270       rs12516573      A       T       .       PASS    AA=T;DP=112     GT:GQ:DP        1|0:100:24      1|1:57:20       1|1:100:70
+6      117017958       rs7765598       G       A       .       PASS    AA=A;DP=116     GT:GQ:DP        1|0:100:24      1|1:57:20       1|1:100:73
+6      82474072        rs1276904       C       G       .       PASS    AA=C;DP=92      GT:GQ:DP        1|0:100:24      1|1:57:21       1|1:87:30
+15     27889078        rs6495927       C       T       .       PASS    AA=C;DP=90      GT:GQ:DP        1|0:100:24      1|1:5:11        1|1:84:54
+10     56157157        rs11004506      A       C       .       PASS    AA=C;DP=96      GT:GQ:DP        1|0:100:24      1|1:5:26        1|1:77:47
+2      51299436        rs10490153      G       A       .       PASS    AA=A;DP=102     GT:GQ:DP        1|0:100:24      1|1:60:20       1|1:100:56
+4      31676891        rs7659842       C       A       .       PASS    AA=C;DP=105     GT:GQ:DP        1|0:100:24      1|1:66:22       1|1:100:62
+14     69347240        rs4902756       C       T       .       PASS    AA=T;DP=110     GT:GQ:DP        1|0:100:24      1|1:66:22       1|1:100:67
+7      78944991        rs2214804       G       A       .       PASS    AA=G;DP=131     GT:GQ:DP        1|0:100:24      1|1:68:30       1|1:100:78
+13     95535809        rs643302        C       G       .       PASS    AA=C;DP=106     GT:GQ:DP        1|0:100:24      1|1:69:23       1|1:100:59
+16     63573588        rs35213 A       C       .       PASS    AA=C;DP=121     GT:GQ:DP        1|0:100:24      1|1:69:23       1|1:100:76
+7      32576090        rs2305320       A       G       .       PASS    AA=G;DP=100     GT:GQ:DP        1|0:100:24      1|1:69:24       1|1:100:51
+4      9817401 rs11734623      C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        1|0:100:24      1|1:72:25       1|1:100:67
+3      177760370       rs7620038       C       G       .       PASS    AA=G;DP=99      GT:GQ:DP        1|0:100:24      1|1:72:25       1|1:99:51
+4      179715115       rs2614643       T       C       .       PASS    AA=C;DP=110     GT:GQ:DP        1|0:100:24      1|1:75:25       1|1:100:63
+13     104756274       rs9555160       T       C       .       PASS    AA=T;DP=110     GT:GQ:DP        1|0:100:24      1|1:75:26       1|1:100:58
+12     9272396 rs2059758       A       G       .       PASS    AA=A;DP=85      GT:GQ:DP        1|0:100:24      1|1:78:29       1|1:57:19
+1      191358607       rs4450000       C       G       .       PASS    AA=C;DP=116;HM2 GT:GQ:DP        1|0:100:24      1|1:78:35       1|1:100:57
+1      88564408        rs483741        G       C       .       PASS    AA=C;DP=107;HM2 GT:GQ:DP        1|0:100:24      1|1:81:27       1|1:100:56
+14     64435601        rs1951489       C       T       .       PASS    AA=T;DP=100     GT:GQ:DP        1|0:100:24      1|1:90:30       1|1:100:48
+1      117645774       rs1877465       A       G       .       PASS    AA=A;DP=126;HM2;HM3     GT:GQ:DP        1|0:100:25      0|0:100:33      1|0:100:64
+11     23273421        .       C       T       .       PASS    AA=C;DP=116     GT:GQ:DP        1|0:100:25      0|0:100:34      1|0:100:56
+3      189155295       .       A       G       .       PASS    AA=A;DP=147     GT:GQ:DP        1|0:100:25      0|0:100:36      1|0:100:49
+8      73738226        rs16938281      G       A       .       PASS    AA=G;DP=135     GT:GQ:DP        1|0:100:25      0|0:100:37      1|0:100:73
+1      216498048       .       G       A       .       PASS    AA=G;DP=132     GT:GQ:DP        1|0:100:25      0|0:100:41      1|0:100:65
+8      6560664 rs28659886      A       T       .       PASS    AA=A;DP=151     GT:GQ:DP        1|0:100:25      0|0:100:42      1|0:100:69
+16     58812082        rs34927961      A       G       .       PASS    AA=A;DP=89      GT:GQ:DP        1|0:100:25      0|0:13:14       1|0:100:51
+11     80442758        rs12798692      T       G       .       PASS    AA=G;DP=83      GT:GQ:DP        1|0:100:25      0|0:15:15       1|0:100:44
+14     103652139       rs61997624      C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        1|0:100:25      0|0:16:13       1|0:100:72
+8      130422853       rs16904030      G       A       .       PASS    AA=A;DP=92      GT:GQ:DP        1|0:100:25      0|0:18:14       1|0:100:53
+13     32799517        .       A       T       .       PASS    AA=N;DP=86      GT:GQ:DP        1|0:100:25      0|0:21:14       1|0:100:37
+X      74876300        .       A       G       .       PASS    AA=a;DP=124     GT:GQ:DP        1|0:100:25      0|0:21:32       1|0:72:46
+3      198656369       .       A       G       .       PASS    AA=A;DP=107     GT:GQ:DP        1|0:100:25      0|0:22:15       1|0:100:65
+3      30090408        .       C       A       .       PASS    AA=C;DP=105     GT:GQ:DP        1|0:100:25      0|0:22:21       1|0:100:59
+18     70353243        rs17816861      G       T       .       PASS    AA=G;DP=124     GT:GQ:DP        1|0:100:25      0|0:28:28       1|0:100:70
+16     79053287        .       G       A       .       PASS    AA=G;DP=94      GT:GQ:DP        1|0:100:25      0|0:29:15       1|0:100:58
+1      12702608        rs10864578      A       T       .       PASS    AA=A;DP=92;HM2  GT:GQ:DP        1|0:100:25      0|0:29:20       1|0:100:31
+12     103563626       rs34354414      T       C       .       PASS    AA=T;DP=117     GT:GQ:DP        1|0:100:25      0|0:29:9        1|0:100:41
+4      122518314       .       C       T       .       PASS    AA=C;DP=88      GT:GQ:DP        1|0:100:25      0|0:31:16       1|0:100:46
+9      136401307       .       C       T       .       PASS    AA=-;DP=96      GT:GQ:DP        1|0:100:25      0|0:32:11       1|0:100:52
+11     70015932        rs34373882      C       T       .       PASS    AA=C;DP=106     GT:GQ:DP        1|0:100:25      0|0:32:11       1|0:100:71
+14     87957218        .       A       T       .       PASS    AA=a;DP=106     GT:GQ:DP        1|0:100:25      0|0:32:21       1|0:100:49
+1      92506458        rs12097184      G       A       .       PASS    AA=G;DP=116;HM2 GT:GQ:DP        1|0:100:25      0|0:34:20       1|0:100:74
+13     112144073       .       C       T       .       PASS    AA=C;DP=109     GT:GQ:DP        1|0:100:25      0|0:35:11       1|0:100:73
+5      155863504       rs1835912       T       C       .       PASS    AA=t;DP=99      GT:GQ:DP        1|0:100:25      0|0:35:12       1|0:100:64
+9      123672839       rs16911064      C       T       .       PASS    AA=C;DP=129     GT:GQ:DP        1|0:100:25      0|0:35:18       1|0:100:80
+20     60785185        rs2427380       C       G       .       PASS    AA=C;DP=113     GT:GQ:DP        1|0:100:25      0|0:35:22       1|0:100:58
+7      31295819        rs10251740      G       A       .       PASS    AA=G;DP=123     GT:GQ:DP        1|0:100:25      0|0:36:19       1|0:100:78
+13     111885712       rs59783871      G       A       .       PASS    AA=G;DP=82      GT:GQ:DP        1|0:100:25      0|0:38:12       1|0:100:36
+18     67134387        .       A       C       .       PASS    AA=A;DP=84      GT:GQ:DP        1|0:100:25      0|0:38:12       1|0:100:44
+1      18492232        .       C       T       .       PASS    AA=C;DP=96      GT:GQ:DP        1|0:100:25      0|0:38:12       1|0:100:57
+2      139151564       .       A       G       .       PASS    AA=A;DP=97      GT:GQ:DP        1|0:100:25      0|0:38:12       1|0:100:61
+4      183849136       rs7688783       A       G       .       PASS    AA=A;DP=76      GT:GQ:DP        1|0:100:25      0|0:38:13       1|0:100:38
+13     39113956        rs7990283       A       G       .       PASS    AA=N;DP=99      GT:GQ:DP        1|0:100:25      0|0:38:15       1|0:100:58
+18     57395473        .       A       C       .       PASS    AA=A;DP=128     GT:GQ:DP        1|0:100:25      0|0:39:19       1|0:100:85
+1      30957823        rs59109868      C       T       .       PASS    AA=T;DP=132     GT:GQ:DP        1|0:100:25      0|0:39:23       1|0:100:73
+20     21002511        rs6137244       G       T       .       PASS    AA=T;DP=82      GT:GQ:DP        1|0:100:25      0|0:41:13       1|0:100:32
+1      3145285 rs6676225       T       C       .       PASS    AA=C;DP=100     GT:GQ:DP        1|0:100:25      0|0:41:13       1|0:100:55
+11     102128927       .       G       A       .       PASS    AA=A;DP=100     GT:GQ:DP        1|0:100:25      0|0:41:15       1|0:100:60
+12     40331310        rs287014        C       G       .       PASS    AA=C;DP=96      GT:GQ:DP        1|0:100:25      0|0:42:17       1|0:100:53
+7      12891301        rs6460986       C       A       .       PASS    AA=C;DP=124     GT:GQ:DP        1|0:100:25      0|0:42:20       1|0:100:82
+10     90779441        rs10887887      G       T       .       PASS    AA=T;DP=117     GT:GQ:DP        1|0:100:25      0|0:42:21       1|0:100:72
+11     70161894        rs58016288      G       A       .       PASS    AA=G;DP=155     GT:GQ:DP        1|0:100:25      0|0:43:19       1|0:100:60
+11     23367033        .       T       C       .       PASS    AA=t;DP=86      GT:GQ:DP        1|0:100:25      0|0:44:14       1|0:100:35
+21     34726111        .       C       T       .       PASS    AA=C;DP=102     GT:GQ:DP        1|0:100:25      0|0:44:14       1|0:100:62
+13     52533783        rs7985233       C       G       .       PASS    AA=C;DP=103     GT:GQ:DP        1|0:100:25      0|0:44:14       1|0:100:65
+4      519536  .       C       A       .       PASS    AA=c;DP=109     GT:GQ:DP        1|0:100:25      0|0:44:14       1|0:100:67
+5      151922796       rs58374041      T       A       .       PASS    AA=T;DP=81      GT:GQ:DP        1|0:100:25      0|0:44:15       1|0:100:41
+7      108303552       rs56862868      G       A       .       PASS    AA=G;DP=98      GT:GQ:DP        1|0:100:25      0|0:44:15       1|0:100:58
+2      113100640       .       A       G       .       PASS    AA=A;DP=106     GT:GQ:DP        1|0:100:25      0|0:44:15       1|0:100:68
+11     43491977        rs11037457      A       G       .       PASS    AA=A;DP=120     GT:GQ:DP        1|0:100:25      0|0:44:16       1|0:100:38
+18     29843038        .       T       C       .       PASS    AA=N;DP=90      GT:GQ:DP        1|0:100:25      0|0:44:20       1|0:100:44
+6      106485862       rs11152938      T       G       .       PASS    AA=T;DP=119     GT:GQ:DP        1|0:100:25      0|0:46:20       1|0:100:74
+20     16963594        .       C       A       .       PASS    AA=C;DP=112     GT:GQ:DP        1|0:100:25      0|0:46:26       1|0:100:64
+1      151152537       rs2879485       G       A       .       PASS    AA=G;DP=97;HM2;HM3      GT:GQ:DP        1|0:100:25      0|0:47:15       1|0:100:56
+2      146518400       rs13018064      C       A       .       PASS    AA=C;DP=98      GT:GQ:DP        1|0:100:25      0|0:47:15       1|0:100:57
+8      133375797       rs60739100      G       T       .       PASS    AA=T;DP=103     GT:GQ:DP        1|0:100:25      0|0:47:15       1|0:100:62
+6      72350576        rs12529063      C       T       .       PASS    AA=C;DP=109     GT:GQ:DP        1|0:100:25      0|0:47:15       1|0:100:69
+1      19272820        .       C       T       .       PASS    AA=C;DP=113     GT:GQ:DP        1|0:100:25      0|0:47:15       1|0:100:71
+4      118358468       .       C       T       .       PASS    AA=C;DP=114     GT:GQ:DP        1|0:100:25      0|0:47:15       1|0:100:71
+11     79133242        .       A       G       .       PASS    AA=A;DP=110     GT:GQ:DP        1|0:100:25      0|0:47:15       1|0:100:73
+10     87232661        rs2136594       G       A       .       PASS    AA=A;DP=112     GT:GQ:DP        1|0:100:25      0|0:47:16       1|0:100:71
+14     42222234        rs1698506       T       G       .       PASS    AA=T;DP=111     GT:GQ:DP        1|0:100:25      0|0:47:16       1|0:100:71
+14     50038960        rs2180499       T       C       .       PASS    AA=T;DP=96      GT:GQ:DP        1|0:100:25      0|0:47:18       1|0:100:56
+2      145592223       rs58147561      C       A       .       PASS    AA=C;DP=100     GT:GQ:DP        1|0:100:25      0|0:48:21       1|0:100:54
+8      95919099        rs11784299      A       C       .       PASS    AA=A;DP=110     GT:GQ:DP        1|0:100:25      0|0:49:22       1|0:100:63
+4      150195059       rs12508150      C       A       .       PASS    AA=C;DP=142     GT:GQ:DP        1|0:100:25      0|0:49:35       1|0:100:37
+1      203325905       rs7536902       A       G       .       PASS    AA=G;DP=103;HM2 GT:GQ:DP        1|0:100:25      0|0:50:16       1|0:100:58
+4      134555559       .       T       G       .       PASS    AA=T;DP=113     GT:GQ:DP        1|0:100:25      0|0:50:16       1|0:100:59
+8      137540384       rs10104070      G       C       .       PASS    AA=C;DP=106     GT:GQ:DP        1|0:100:25      0|0:50:16       1|0:100:67
+7      83266160        .       G       A       .       PASS    AA=G;DP=114     GT:GQ:DP        1|0:100:25      0|0:50:16       1|0:100:72
+12     21436799        rs11830214      C       T       .       PASS    AA=C;DP=119     GT:GQ:DP        1|0:100:25      0|0:50:16       1|0:100:78
+1      201062454       rs10753921      G       A       .       PASS    AA=G;DP=105;HM2;HM3     GT:GQ:DP        1|0:100:25      0|0:50:17       1|0:100:64
+2      79358919        .       G       A       .       PASS    AA=G;DP=115     GT:GQ:DP        1|0:100:25      0|0:50:17       1|0:100:74
+13     78343195        .       A       T       .       PASS    AA=A;DP=130     GT:GQ:DP        1|0:100:25      0|0:51:21       1|0:100:87
+11     49032256        .       A       T       .       PASS    AA=A;DP=119     GT:GQ:DP        1|0:100:25      0|0:51:22       1|0:100:70
+6      160144017       rs6935991       A       C       .       PASS    AA=T;DP=107     GT:GQ:DP        1|0:100:25      0|0:52:31       1|0:100:52
+12     2828111 .       G       A       .       PASS    AA=G;DP=91      GT:GQ:DP        1|0:100:25      0|0:53:17       1|0:100:40
+9      18580804        rs1576898       T       C       .       PASS    AA=T;DP=104     GT:GQ:DP        1|0:100:25      0|0:53:17       1|0:100:59
+8      27503531        rs59194681      A       G       .       PASS    AA=A;DP=111     GT:GQ:DP        1|0:100:25      0|0:53:17       1|0:100:74
+9      108123051       rs991667        T       A       .       PASS    AA=A;DP=127     GT:GQ:DP        1|0:100:25      0|0:53:17       1|0:100:80
+2      36743619        .       C       T       .       PASS    AA=C;DP=96      GT:GQ:DP        1|0:100:25      0|0:53:18       1|0:100:53
+5      117890275       rs6880637       C       T       .       PASS    AA=t;DP=104     GT:GQ:DP        1|0:100:25      0|0:53:19       1|0:100:62
+X      154701435       rs28841414      G       A       .       PASS    AA=g;DP=85      GT:GQ:DP        1|0:100:25      0|0:53:19       1|0:92:38
+21     23481691        .       C       A       .       PASS    AA=C;DP=105     GT:GQ:DP        1|0:100:25      0|0:53:28       1|0:100:50
+14     28843055        rs58436060      T       C       .       PASS    AA=T;DP=135     GT:GQ:DP        1|0:100:25      0|0:53:30       1|0:100:81
+10     116475837       rs10885600      C       T       .       PASS    AA=c;DP=105     GT:GQ:DP        1|0:100:25      0|0:54:23       1|0:100:56
+11     41475295        .       C       T       .       PASS    AA=C;DP=109     GT:GQ:DP        1|0:100:25      0|0:54:23       1|0:100:59
+10     106230584       .       T       C       .       PASS    AA=T;DP=132     GT:GQ:DP        1|0:100:25      0|0:55:25       1|0:100:39
+9      86714453        rs11788184      T       C       .       PASS    AA=C;DP=115     GT:GQ:DP        1|0:100:25      0|0:55:29       1|0:100:64
+2      126058011       .       G       A       .       PASS    AA=G;DP=119     GT:GQ:DP        1|0:100:25      0|0:55:29       1|0:100:65
+4      41951351        rs1542686       A       G       .       PASS    AA=A;DP=125     GT:GQ:DP        1|0:100:25      0|0:56:18       1|0:100:35
+6      49588121        rs9381792       C       G       .       PASS    AA=C;DP=93      GT:GQ:DP        1|0:100:25      0|0:56:18       1|0:100:50
+2      237935067       rs7597574       T       C       .       PASS    AA=T;DP=103     GT:GQ:DP        1|0:100:25      0|0:56:18       1|0:100:60
+2      170488444       rs60123504      T       C       .       PASS    AA=T;DP=111     GT:GQ:DP        1|0:100:25      0|0:56:18       1|0:100:69
+4      160934233       .       T       C       .       PASS    AA=T;DP=83      GT:GQ:DP        1|0:100:25      0|0:56:19       1|0:100:27
+15     35437343        .       T       C       .       PASS    AA=T;DP=141     GT:GQ:DP        1|0:100:25      0|0:56:19       1|0:100:45
+20     55667544        .       A       G       .       PASS    AA=A;DP=106     GT:GQ:DP        1|0:100:25      0|0:56:19       1|0:100:49
+11     112607007       .       T       C       .       PASS    AA=T;DP=151     GT:GQ:DP        1|0:100:25      0|0:56:19       1|0:100:52
+5      82271728        .       G       A       .       PASS    AA=G;DP=125     GT:GQ:DP        1|0:100:25      0|0:56:19       1|0:100:79
+7      101569473       .       C       T       .       PASS    AA=C;DP=123     GT:GQ:DP        1|0:100:25      0|0:56:19       1|0:100:79
+14     49807823        .       G       C       .       PASS    AA=G;DP=101     GT:GQ:DP        1|0:100:25      0|0:56:20       1|0:100:57
+1      33652943        rs1535916       C       T       .       PASS    AA=c;DP=109;HM2 GT:GQ:DP        1|0:100:25      0|0:56:20       1|0:100:62
+12     97922775        rs11835558      T       C       .       PASS    AA=T;DP=126     GT:GQ:DP        1|0:100:25      0|0:56:25       1|0:100:76
+6      146367378       rs1854901       T       C       .       PASS    AA=C;DP=94      GT:GQ:DP        1|0:100:25      0|0:57:22       1|0:100:31
+19     7333239 .       G       A       .       PASS    AA=A;DP=122     GT:GQ:DP        1|0:100:25      0|0:57:29       1|0:100:54
+6      4186284 .       T       C       .       PASS    AA=C;DP=100     GT:GQ:DP        1|0:100:25      0|0:59:19       1|0:100:52
+10     78811042        rs11002140      T       C       .       PASS    AA=T;DP=102     GT:GQ:DP        1|0:100:25      0|0:59:19       1|0:100:58
+20     24978067        .       C       G       .       PASS    AA=C;DP=104     GT:GQ:DP        1|0:100:25      0|0:59:19       1|0:100:60
+16     77697063        rs11150135      T       G       .       PASS    AA=T;DP=106     GT:GQ:DP        1|0:100:25      0|0:59:19       1|0:100:63
+1      180680533       rs58677841      C       A       .       PASS    AA=A;DP=112     GT:GQ:DP        1|0:100:25      0|0:59:19       1|0:100:69
+5      62104472        rs59271900      T       C       .       PASS    AA=T;DP=114     GT:GQ:DP        1|0:100:25      0|0:59:19       1|0:100:70
+4      141721912       .       G       A       .       PASS    AA=G;DP=126     GT:GQ:DP        1|0:100:25      0|0:59:19       1|0:100:83
+10     49971019        rs10219080      A       T       .       PASS    AA=A;DP=103     GT:GQ:DP        1|0:100:25      0|0:59:20       1|0:100:45
+15     33385384        .       T       C       .       PASS    AA=T;DP=133     GT:GQ:DP        1|0:100:25      0|0:59:20       1|0:100:47
+5      27578764        .       C       T       .       PASS    AA=C;DP=118     GT:GQ:DP        1|0:100:25      0|0:59:20       1|0:100:73
+12     125460244       rs2191183       C       T       .       PASS    AA=C;DP=128     GT:GQ:DP        1|0:100:25      0|0:59:20       1|0:100:83
+9      1013277 rs10756005      G       A       .       PASS    AA=G;DP=113     GT:GQ:DP        1|0:100:25      0|0:60:31       1|0:100:56
+3      102217963       rs16843163      A       C       .       PASS    AA=A;DP=99      GT:GQ:DP        1|0:100:25      0|0:61:23       1|0:100:52
+2      175842075       .       C       T       .       PASS    AA=C;DP=132     GT:GQ:DP        1|0:100:25      0|0:62:20       1|0:100:29
+5      174065806       rs2135939       C       G       .       PASS    AA=C;DP=88      GT:GQ:DP        1|0:100:25      0|0:62:20       1|0:100:33
+13     64329618        .       G       A       .       PASS    AA=G;DP=84      GT:GQ:DP        1|0:100:25      0|0:62:20       1|0:100:38
+1      98358023        .       C       T       .       PASS    AA=C;DP=132     GT:GQ:DP        1|0:100:25      0|0:62:20       1|0:100:45
+1      161383234       .       G       C       .       PASS    AA=G;DP=94      GT:GQ:DP        1|0:100:25      0|0:62:20       1|0:100:49
+4      127259286       rs4834089       C       T       .       PASS    AA=c;DP=95      GT:GQ:DP        1|0:100:25      0|0:62:20       1|0:100:52
+12     43420853        .       G       A       .       PASS    AA=G;DP=98      GT:GQ:DP        1|0:100:25      0|0:62:20       1|0:100:53
+6      160811389       .       A       T       .       PASS    AA=a;DP=100     GT:GQ:DP        1|0:100:25      0|0:62:20       1|0:100:55
+7      122683992       rs10277013      C       T       .       PASS    AA=T;DP=110     GT:GQ:DP        1|0:100:25      0|0:62:20       1|0:100:55
+20     13866640        rs6079226       T       C       .       PASS    AA=T;DP=103     GT:GQ:DP        1|0:100:25      0|0:62:20       1|0:100:59
+9      82010522        .       C       T       .       PASS    AA=C;DP=107     GT:GQ:DP        1|0:100:25      0|0:62:20       1|0:100:65
+12     94643135        .       G       A       .       PASS    AA=G;DP=114     GT:GQ:DP        1|0:100:25      0|0:62:20       1|0:100:70
+15     91676392        rs1483314       A       T       .       PASS    AA=A;DP=113     GT:GQ:DP        1|0:100:25      0|0:62:20       1|0:100:71
+12     25108920        rs11047800      G       A       .       PASS    AA=A;DP=117     GT:GQ:DP        1|0:100:25      0|0:62:20       1|0:100:72
+6      10616744        .       G       C       .       PASS    AA=G;DP=122     GT:GQ:DP        1|0:100:25      0|0:62:20       1|0:100:75
+4      23780569        .       A       G       .       PASS    AA=A;DP=122     GT:GQ:DP        1|0:100:25      0|0:62:20       1|0:100:79
+8      120046949       rs35968003      G       A       .       PASS    AA=A;DP=105     GT:GQ:DP        1|0:100:25      0|0:62:21       1|0:100:60
+8      35081683        rs2923644       G       A       .       PASS    AA=G;DP=110     GT:GQ:DP        1|0:100:25      0|0:62:21       1|0:100:66
+7      120682412       rs11763675      C       G       .       PASS    AA=G;DP=113     GT:GQ:DP        1|0:100:25      0|0:62:21       1|0:100:68
+10     11949773        .       G       A       .       PASS    AA=G;DP=134     GT:GQ:DP        1|0:100:25      0|0:62:21       1|0:100:89
+3      169854422       .       G       A       .       PASS    AA=G;DP=97      GT:GQ:DP        1|0:100:25      0|0:62:22       1|0:100:48
+4      64531329        .       T       C       .       PASS    AA=t;DP=108     GT:GQ:DP        1|0:100:25      0|0:62:22       1|0:100:62
+15     44309983        .       G       A       .       PASS    AA=G;DP=132     GT:GQ:DP        1|0:100:25      0|0:63:32       1|0:100:76
+4      178432211       .       C       T       .       PASS    AA=C;DP=87      GT:GQ:DP        1|0:100:25      0|0:65:21       1|0:100:31
+13     72986434        .       T       C       .       PASS    AA=C;DP=130     GT:GQ:DP        1|0:100:25      0|0:65:21       1|0:100:35
+3      65196134        .       T       G       .       PASS    AA=t;DP=89      GT:GQ:DP        1|0:100:25      0|0:65:21       1|0:100:35
+6      139824535       rs62440873      G       T       .       PASS    AA=T;DP=93      GT:GQ:DP        1|0:100:25      0|0:65:21       1|0:100:48
+4      143417563       rs35214831      A       G       .       PASS    AA=A;DP=97      GT:GQ:DP        1|0:100:25      0|0:65:21       1|0:100:51
+21     25676333        .       G       C       .       PASS    AA=G;DP=100     GT:GQ:DP        1|0:100:25      0|0:65:21       1|0:100:54
+13     85960131        rs35093338      A       C       .       PASS    AA=A;DP=102     GT:GQ:DP        1|0:100:25      0|0:65:21       1|0:100:55
+1      218224472       rs2647437       C       T       .       PASS    AA=C;DP=103     GT:GQ:DP        1|0:100:25      0|0:65:21       1|0:100:59
+8      36419580        rs7014029       C       T       .       PASS    AA=T;DP=109     GT:GQ:DP        1|0:100:25      0|0:65:21       1|0:100:65
+2      32223762        rs7592239       C       A       .       PASS    AA=C;DP=114     GT:GQ:DP        1|0:100:25      0|0:65:21       1|0:100:68
+2      127166107       rs28387209      G       A       .       PASS    AA=G;DP=122     GT:GQ:DP        1|0:100:25      0|0:65:21       1|0:100:79
+8      116063626       rs2575928       C       T       .       PASS    AA=T;DP=130     GT:GQ:DP        1|0:100:25      0|0:65:21       1|0:100:88
+18     40081157        rs1563504       T       C       .       PASS    AA=T;DP=93      GT:GQ:DP        1|0:100:25      0|0:65:22       1|0:100:47
+7      40305078        rs6962341       C       T       .       PASS    AA=C;DP=97      GT:GQ:DP        1|0:100:25      0|0:65:22       1|0:100:50
+3      30207861        .       T       C       .       PASS    AA=T;DP=113     GT:GQ:DP        1|0:100:25      0|0:65:22       1|0:100:67
+16     53938344        rs31117 A       G       .       PASS    AA=A;DP=118     GT:GQ:DP        1|0:100:25      0|0:65:22       1|0:100:71
+15     91495320        rs7178024       A       C       .       PASS    AA=A;DP=124     GT:GQ:DP        1|0:100:25      0|0:65:22       1|0:100:77
+13     22676269        .       C       T       .       PASS    AA=C;DP=101     GT:GQ:DP        1|0:100:25      0|0:65:24       1|0:100:56
+9      77891171        .       G       A       .       PASS    AA=G;DP=120     GT:GQ:DP        1|0:100:25      0|0:65:28       1|0:100:68
+4      137633758       rs28587723      A       G       .       PASS    AA=a;DP=82      GT:GQ:DP        1|0:100:25      0|0:66:23       1|0:78:35
+1      63200175        .       T       G       .       PASS    AA=T;DP=100     GT:GQ:DP        1|0:100:25      0|0:66:33       1|0:100:41
+13     41101858        rs9590620       T       C       .       PASS    AA=T;DP=120     GT:GQ:DP        1|0:100:25      0|0:66:33       1|0:100:65
+10     133608431       rs11813081      G       C       .       PASS    AA=G;DP=133     GT:GQ:DP        1|0:100:25      0|0:66:33       1|0:100:75
+9      31258456        .       C       T       .       PASS    AA=C;DP=78      GT:GQ:DP        1|0:100:25      0|0:68:22       1|0:100:21
+14     27111100        .       A       C       .       PASS    AA=A;DP=87      GT:GQ:DP        1|0:100:25      0|0:68:22       1|0:100:29
+10     65849970        .       A       G       .       PASS    AA=A;DP=88      GT:GQ:DP        1|0:100:25      0|0:68:22       1|0:100:43
+12     25575775        .       G       A       .       PASS    AA=G;DP=94      GT:GQ:DP        1|0:100:25      0|0:68:22       1|0:100:44
+2      126872640       .       C       T       .       PASS    AA=C;DP=102     GT:GQ:DP        1|0:100:25      0|0:68:22       1|0:100:56
+2      2431505 .       A       C       .       PASS    AA=A;DP=105     GT:GQ:DP        1|0:100:25      0|0:68:22       1|0:100:57
+14     64712959        .       A       G       .       PASS    AA=A;DP=110     GT:GQ:DP        1|0:100:25      0|0:68:22       1|0:100:62
+11     12564002        .       T       G       .       PASS    AA=T;DP=108     GT:GQ:DP        1|0:100:25      0|0:68:22       1|0:100:64
+18     7800004 rs331422        C       G       .       PASS    AA=C;DP=115     GT:GQ:DP        1|0:100:25      0|0:68:22       1|0:100:69
+8      50940829        rs16913461      G       A       .       PASS    AA=G;DP=115     GT:GQ:DP        1|0:100:25      0|0:68:22       1|0:100:69
+2      214898225       rs13419185      C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        1|0:100:25      0|0:68:22       1|0:100:72
+11     35489842        rs1400497       G       A       .       PASS    AA=G;DP=128     GT:GQ:DP        1|0:100:25      0|0:68:22       1|0:100:82
+13     112462799       rs426765        A       T       .       PASS    AA=T;DP=132     GT:GQ:DP        1|0:100:25      0|0:68:22       1|0:100:89
+2      107352741       .       T       C       .       PASS    AA=T;DP=86      GT:GQ:DP        1|0:100:25      0|0:68:22       1|0:95:40
+9      84909601        .       C       T       .       PASS    AA=C;DP=103     GT:GQ:DP        1|0:100:25      0|0:68:23       1|0:100:44
+13     37820011        rs2019516       T       G       .       PASS    AA=T;DP=93      GT:GQ:DP        1|0:100:25      0|0:68:23       1|0:100:46
+15     81674001        rs9707895       G       T       .       PASS    AA=G;DP=111     GT:GQ:DP        1|0:100:25      0|0:68:23       1|0:100:64
+10     59380126        rs2935657       A       T       .       PASS    AA=A;DP=111     GT:GQ:DP        1|0:100:25      0|0:68:23       1|0:100:66
+4      38136107        rs6854103       T       C       .       PASS    AA=T;DP=113     GT:GQ:DP        1|0:100:25      0|0:68:23       1|0:100:66
+10     91584047        rs35762262      T       A       .       PASS    AA=T;DP=118     GT:GQ:DP        1|0:100:25      0|0:68:23       1|0:100:70
+10     56286585        rs11004603      A       T       .       PASS    AA=A;DP=117     GT:GQ:DP        1|0:100:25      0|0:68:23       1|0:100:73
+9      28400655        .       G       C       .       PASS    AA=G;DP=125     GT:GQ:DP        1|0:100:25      0|0:68:23       1|0:100:73
+6      12881741        rs58909892      G       C       .       PASS    AA=G;DP=95      GT:GQ:DP        1|0:100:25      0|0:68:25       1|0:100:46
+13     24815442        .       T       A       .       PASS    AA=t;DP=92      GT:GQ:DP        1|0:100:25      0|0:69:31       1|0:100:37
+12     80510984        .       A       G       .       PASS    AA=A;DP=91      GT:GQ:DP        1|0:100:25      0|0:71:23       1|0:100:42
+12     38589059        .       A       G       .       PASS    AA=A;DP=97      GT:GQ:DP        1|0:100:25      0|0:71:23       1|0:100:49
+4      64130303        .       G       A       .       PASS    AA=G;DP=103     GT:GQ:DP        1|0:100:25      0|0:71:23       1|0:100:56
+6      88173733        rs3736740       A       G       .       PASS    AA=G;DP=104     GT:GQ:DP        1|0:100:25      0|0:71:23       1|0:100:58
+11     110203250       .       A       G       .       PASS    AA=A;DP=116     GT:GQ:DP        1|0:100:25      0|0:71:23       1|0:100:70
+15     93288728        rs2397381       C       G       .       PASS    AA=C;DP=125     GT:GQ:DP        1|0:100:25      0|0:71:23       1|0:100:80
+11     36786368        .       T       C       .       PASS    AA=T;DP=130     GT:GQ:DP        1|0:100:25      0|0:71:23       1|0:100:81
+4      111776709       rs2739204       T       A       .       PASS    AA=T;DP=129     GT:GQ:DP        1|0:100:25      0|0:71:23       1|0:100:81
+10     78401782        .       C       T       .       PASS    AA=C;DP=130     GT:GQ:DP        1|0:100:25      0|0:71:23       1|0:100:84
+16     71680917        rs8049731       G       A       .       PASS    AA=G;DP=133     GT:GQ:DP        1|0:100:25      0|0:71:23       1|0:100:86
+6      138757796       .       T       A       .       PASS    AA=T;DP=101     GT:GQ:DP        1|0:100:25      0|0:71:23       1|0:62:42
+3      118525927       .       C       T       .       PASS    AA=c;DP=90      GT:GQ:DP        1|0:100:25      0|0:71:24       1|0:100:31
+12     92434018        .       A       G       .       PASS    AA=A;DP=134     GT:GQ:DP        1|0:100:25      0|0:71:24       1|0:100:74
+2      236689101       rs13383138      C       T       .       PASS    AA=C;DP=126     GT:GQ:DP        1|0:100:25      0|0:71:24       1|0:100:79
+13     80070575        .       G       A       .       PASS    AA=G;DP=108     GT:GQ:DP        1|0:100:25      0|0:71:25       1|0:100:57
+13     101052986       rs9518462       A       G       .       PASS    AA=A;DP=106     GT:GQ:DP        1|0:100:25      0|0:71:25       1|0:100:58
+2      111438469       rs13000679      T       G       .       PASS    AA=T;DP=134     GT:GQ:DP        1|0:100:25      0|0:72:30       1|0:100:77
+14     21459300        rs7153410       C       G       .       PASS    AA=C;DP=135     GT:GQ:DP        1|0:100:25      0|0:72:35       1|0:100:77
+3      175530672       rs5015151       G       A       .       PASS    AA=G;DP=99      GT:GQ:DP        1|0:100:25      0|0:74:24       1|0:100:49
+4      94784962        .       G       A       .       PASS    AA=G;DP=109     GT:GQ:DP        1|0:100:25      0|0:74:24       1|0:100:57
+4      111238675       rs58561519      C       T       .       PASS    AA=c;DP=110     GT:GQ:DP        1|0:100:25      0|0:74:24       1|0:100:62
+7      18708898        .       C       T       .       PASS    AA=C;DP=113     GT:GQ:DP        1|0:100:25      0|0:74:24       1|0:100:64
+8      117578266       .       A       T       .       PASS    AA=A;DP=117     GT:GQ:DP        1|0:100:25      0|0:74:24       1|0:100:70
+9      104826828       .       G       A       .       PASS    AA=G;DP=119     GT:GQ:DP        1|0:100:25      0|0:74:24       1|0:100:71
+9      89472163        .       G       A       .       PASS    AA=G;DP=118     GT:GQ:DP        1|0:100:25      0|0:74:24       1|0:100:71
+3      117102965       rs7619207       A       G       .       PASS    AA=G;DP=126     GT:GQ:DP        1|0:100:25      0|0:74:24       1|0:100:75
+8      25640973        rs1960941       T       C       .       PASS    AA=T;DP=99      GT:GQ:DP        1|0:100:25      0|0:74:25       1|0:100:40
+6      53662552        .       C       T       .       PASS    AA=C;DP=100     GT:GQ:DP        1|0:100:25      0|0:74:25       1|0:100:50
+4      123742121       rs976184        T       C       .       PASS    AA=C;DP=103     GT:GQ:DP        1|0:100:25      0|0:74:25       1|0:100:56
+8      90711370        .       A       G       .       PASS    AA=A;DP=116     GT:GQ:DP        1|0:100:25      0|0:74:25       1|0:100:65
+15     57966635        rs2960811       G       A       .       PASS    AA=G;DP=114     GT:GQ:DP        1|0:100:25      0|0:74:26       1|0:100:60
+14     42896106        rs61653054      G       T       .       PASS    AA=G;DP=125     GT:GQ:DP        1|0:100:25      0|0:74:30       1|0:100:70
+2      9792497 rs57569408      C       A       .       PASS    AA=A;DP=122     GT:GQ:DP        1|0:100:25      0|0:75:25       1|0:100:74
+4      150382359       rs28375615      C       A       .       PASS    AA=A;DP=136     GT:GQ:DP        1|0:100:25      0|0:75:32       1|0:100:81
+14     57536550        rs2747101       C       G       .       PASS    AA=C;DP=117     GT:GQ:DP        1|0:100:25      0|0:77:25       1|0:100:25
+12     93375175        .       A       T       .       PASS    AA=T;DP=123     GT:GQ:DP        1|0:100:25      0|0:77:25       1|0:100:31
+7      19472221        .       T       C       .       PASS    AA=T;DP=96      GT:GQ:DP        1|0:100:25      0|0:77:25       1|0:100:46
+8      78268637        rs10103623      A       G       .       PASS    AA=A;DP=109     GT:GQ:DP        1|0:100:25      0|0:77:25       1|0:100:60
+2      235864939       .       T       C       .       PASS    AA=T;DP=112     GT:GQ:DP        1|0:100:25      0|0:77:25       1|0:100:64
+20     53418683        rs6024057       T       C       .       PASS    AA=T;DP=114     GT:GQ:DP        1|0:100:25      0|0:77:25       1|0:100:66
+21     39121151        rs2836692       C       T       .       PASS    AA=C;DP=127     GT:GQ:DP        1|0:100:25      0|0:77:25       1|0:100:77
+4      110276536       rs3108933       G       A       .       PASS    AA=G;DP=132     GT:GQ:DP        1|0:100:25      0|0:77:25       1|0:100:84
+17     11557625        rs9906094       A       G       .       PASS    AA=A;DP=107     GT:GQ:DP        1|0:100:25      0|0:77:26       1|0:100:58
+3      96982566        .       G       T       .       PASS    AA=G;DP=111     GT:GQ:DP        1|0:100:25      0|0:77:26       1|0:100:58
+5      146316029       rs6580445       T       C       .       PASS    AA=T;DP=121     GT:GQ:DP        1|0:100:25      0|0:77:26       1|0:100:70
+12     79793127        rs1795505       G       C       .       PASS    AA=G;DP=121     GT:GQ:DP        1|0:100:25      0|0:77:29       1|0:100:68
+14     61991266        rs28452089      C       T       .       PASS    AA=C;DP=117     GT:GQ:DP        1|0:100:25      0|0:80:26       1|0:100:65
+2      124656497       rs56321724      A       T       .       PASS    AA=A;DP=132     GT:GQ:DP        1|0:100:25      0|0:80:26       1|0:100:66
+5      112177948       rs58659317      A       G       .       PASS    AA=A;DP=125     GT:GQ:DP        1|0:100:25      0|0:80:26       1|0:100:75
+16     9942566 rs13332245      C       T       .       PASS    AA=T;DP=137     GT:GQ:DP        1|0:100:25      0|0:80:26       1|0:100:86
+18     2752777 rs7245080       C       T       .       PASS    AA=C;DP=116     GT:GQ:DP        1|0:100:25      0|0:80:27       1|0:100:51
+13     90250158        rs1013832       G       A       .       PASS    AA=G;DP=117     GT:GQ:DP        1|0:100:25      0|0:80:27       1|0:100:67
+21     15694586        .       G       A       .       PASS    AA=G;DP=143     GT:GQ:DP        1|0:100:25      0|0:80:27       1|0:100:90
+19     23668798        .       C       T       .       PASS    AA=t;DP=103     GT:GQ:DP        1|0:100:25      0|0:80:28       1|0:100:37
+5      8438541 rs48400 T       C       .       PASS    AA=T;DP=122     GT:GQ:DP        1|0:100:25      0|0:80:28       1|0:100:70
+11     113709394       rs2852422       T       C       .       PASS    AA=T;DP=142     GT:GQ:DP        1|0:100:25      0|0:80:28       1|0:100:81
+2      77822345        rs6756516       T       A       .       PASS    AA=t;DP=136     GT:GQ:DP        1|0:100:25      0|0:81:38       1|0:100:74
+11     113934040       rs58893752      A       C       .       PASS    AA=A;DP=90      GT:GQ:DP        1|0:100:25      0|0:83:27       1|0:100:36
+11     55550537        rs6591833       G       C       .       PASS    AA=G;DP=133     GT:GQ:DP        1|0:100:25      0|0:83:27       1|0:100:40
+18     5163179 rs9950787       T       C       .       PASS    AA=T;DP=113     GT:GQ:DP        1|0:100:25      0|0:83:27       1|0:100:56
+2      13250908        rs10166497      A       T       .       PASS    AA=T;DP=113     GT:GQ:DP        1|0:100:25      0|0:83:27       1|0:100:56
+8      122942182       .       C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        1|0:100:25      0|0:83:27       1|0:100:57
+7      49682782        rs57068957      A       G       .       PASS    AA=A;DP=114     GT:GQ:DP        1|0:100:25      0|0:83:27       1|0:100:62
+3      109793423       rs6774944       C       G       .       PASS    AA=C;DP=126     GT:GQ:DP        1|0:100:25      0|0:83:27       1|0:100:78
+4      181375972       rs59364850      A       T       .       PASS    AA=A;DP=138     GT:GQ:DP        1|0:100:25      0|0:83:27       1|0:100:82
+7      83433574        .       T       C       .       PASS    AA=T;DP=88      GT:GQ:DP        1|0:100:25      0|0:83:28       1|0:100:24
+5      42714102        rs11739840      T       C       .       PASS    AA=T;DP=135     GT:GQ:DP        1|0:100:25      0|0:83:28       1|0:100:81
+1      179223608       rs6425658       G       A       .       PASS    AA=G;DP=126;HM2;HM3     GT:GQ:DP        1|0:100:25      0|0:83:28       1|0:64:28
+11     62670768        rs11231383      G       A       .       PASS    AA=G;DP=88      GT:GQ:DP        1|0:100:25      0|0:83:29       1|0:100:25
+1      51261160        .       G       A       .       PASS    AA=G;DP=119     GT:GQ:DP        1|0:100:25      0|0:86:28       1|0:100:54
+7      141675957       .       C       T       .       PASS    AA=c;DP=110     GT:GQ:DP        1|0:100:25      0|0:86:28       1|0:100:58
+5      144830074       rs1422922       T       G       .       PASS    AA=T;DP=133     GT:GQ:DP        1|0:100:25      0|0:86:28       1|0:100:82
+22     24888274        .       G       A       .       PASS    AA=g;DP=163     GT:GQ:DP        1|0:100:25      0|0:86:29       1|0:100:49
+3      147648514       rs7629192       C       T       .       PASS    AA=C;DP=117     GT:GQ:DP        1|0:100:25      0|0:86:29       1|0:100:64
+4      164790828       rs28526833      G       A       .       PASS    AA=A;DP=103     GT:GQ:DP        1|0:100:25      0|0:86:31       1|0:100:36
+5      4719164 rs7726500       A       G       .       PASS    AA=A;DP=123     GT:GQ:DP        1|0:100:25      0|0:89:29       1|0:100:69
+7      79236844        rs55772364      T       G       .       PASS    AA=T;DP=131     GT:GQ:DP        1|0:100:25      0|0:89:29       1|0:100:75
+3      60686699        rs7643144       C       T       .       PASS    AA=C;DP=107     GT:GQ:DP        1|0:100:25      0|0:89:30       1|0:100:52
+19     13173791        rs12977801      C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        1|0:100:25      0|0:89:30       1|0:100:62
+3      19616195        .       A       C       .       PASS    AA=A;DP=123     GT:GQ:DP        1|0:100:25      0|0:89:30       1|0:100:68
+16     9594120 rs57599202      G       T       .       PASS    AA=G;DP=125     GT:GQ:DP        1|0:100:25      0|0:89:30       1|0:100:69
+9      102857303       .       C       G       .       PASS    AA=C;DP=120     GT:GQ:DP        1|0:100:25      0|0:89:32       1|0:100:64
+5      71110766        .       G       A       .       PASS    AA=G;DP=126     GT:GQ:DP        1|0:100:25      0|0:89:32       1|0:100:67
+20     7109056 rs926940        A       G       .       PASS    AA=G;DP=119     GT:GQ:DP        1|0:100:25      0|0:92:30       1|0:100:64
+5      131976790       rs10520114      A       G       .       PASS    AA=A;DP=138     GT:GQ:DP        1|0:100:25      0|0:92:30       1|0:100:84
+12     65769379        rs11176570      A       G       .       PASS    AA=A;DP=108     GT:GQ:DP        1|0:100:25      0|0:92:31       1|0:100:52
+3      10964242        rs9815136       C       T       .       PASS    AA=C;DP=123     GT:GQ:DP        1|0:100:25      0|0:92:31       1|0:100:67
+6      5333937 rs2503809       T       G       .       PASS    AA=G;DP=115     GT:GQ:DP        1|0:100:25      0|0:92:32       1|0:100:58
+18     69960088        rs8096196       G       T       .       PASS    AA=T;DP=134     GT:GQ:DP        1|0:100:25      0|0:95:31       1|0:100:77
+9      21610712        rs59411805      A       G       .       PASS    AA=A;DP=128     GT:GQ:DP        1|0:100:25      0|0:98:32       1|0:100:74
+8      87971710        rs59344788      A       G       .       PASS    AA=A;DP=142     GT:GQ:DP        1|0:100:25      0|0:98:34       1|0:100:42
+13     36648658        .       A       G       .       PASS    AA=A;DP=128     GT:GQ:DP        1|0:100:25      0|0:98:34       1|0:100:65
+14     42695116        rs10142805      C       G       .       PASS    AA=G;DP=82      GT:GQ:DP        1|0:100:25      1|0:100:12      1|1:70:45
+4      62922171        rs7675840       T       G       .       PASS    AA=G;DP=80      GT:GQ:DP        1|0:100:25      1|0:100:14      1|1:100:36
+4      4933454 rs4373107       A       T       .       PASS    AA=A;DP=70      GT:GQ:DP        1|0:100:25      1|0:100:14      1|1:84:29
+3      162947520       rs492272        T       G       .       PASS    AA=G;DP=94      GT:GQ:DP        1|0:100:25      1|0:100:15      1|1:100:52
+19     768980  rs8108787       T       C       .       PASS    AA=T;DP=107     GT:GQ:DP        1|0:100:25      1|0:100:15      1|1:100:64
+8      14388535        rs11779752      T       C       .       PASS    AA=t;DP=93      GT:GQ:DP        1|0:100:25      1|0:100:16      1|1:100:47
+6      11068144        rs6918936       G       C       .       PASS    AA=C;DP=98      GT:GQ:DP        1|0:100:25      1|0:100:17      1|1:100:56
+4      144880770       rs4325971       A       G       .       PASS    AA=a;DP=104     GT:GQ:DP        1|0:100:25      1|0:100:17      1|1:100:60
+11     49328335        rs1917324       G       C       .       PASS    AA=G;DP=114     GT:GQ:DP        1|0:100:25      1|0:100:17      1|1:100:69
+2      237650976       rs9653221       A       G       .       PASS    AA=G;DP=110     GT:GQ:DP        1|0:100:25      1|0:100:17      1|1:100:71
+8      123654223       rs57894213      G       A       .       PASS    AA=G;DP=97      GT:GQ:DP        1|0:100:25      1|0:100:18      1|1:100:53
+2      2379464 rs62114462      A       G       .       PASS    AA=A;DP=96      GT:GQ:DP        1|0:100:25      1|0:100:19      1|1:100:42
+2      15128667        rs57399274      C       G       .       PASS    AA=C;DP=124     GT:GQ:DP        1|0:100:25      1|0:100:19      1|1:100:79
+1      120869765       rs10794671      A       C       .       PASS    AA=A;DP=76      GT:GQ:DP        1|0:100:25      1|0:100:19      1|1:40:26
+4      35335470        rs13137779      T       G       .       PASS    AA=T;DP=89      GT:GQ:DP        1|0:100:25      1|0:100:19      1|1:87:43
+7      18962244        rs17140387      C       G       .       PASS    AA=C;DP=89      GT:GQ:DP        1|0:100:25      1|0:100:20      1|1:100:35
+9      16748776        rs944208        T       C       .       PASS    AA=C;DP=97      GT:GQ:DP        1|0:100:25      1|0:100:20      1|1:100:52
+3      191321814       rs938511        C       T       .       PASS    AA=C;DP=104     GT:GQ:DP        1|0:100:25      1|0:100:20      1|1:100:58
+17     69323175        rs9892564       A       C       .       PASS    AA=C;DP=105     GT:GQ:DP        1|0:100:25      1|0:100:20      1|1:78:49
+6      115339402       rs11153526      T       C       .       PASS    AA=T;DP=97      GT:GQ:DP        1|0:100:25      1|0:100:21      1|1:21:49
+7      23898840        rs55799600      G       A       .       PASS    AA=G;DP=111     GT:GQ:DP        1|0:100:25      1|0:100:22      1|1:100:61
+5      65831818        rs6897379       C       T       .       PASS    AA=c;DP=126     GT:GQ:DP        1|0:100:25      1|0:100:22      1|1:100:73
+9      113678419       rs10759513      C       T       .       PASS    AA=C;DP=121     GT:GQ:DP        1|0:100:25      1|0:100:22      1|1:100:75
+17     48371801        rs1996063       A       G       .       PASS    AA=G;DP=100     GT:GQ:DP        1|0:100:25      1|0:100:23      1|1:100:54
+11     27923380        rs2726830       A       C       .       PASS    AA=A;DP=84      GT:GQ:DP        1|0:100:25      1|0:100:23      1|1:57:26
+5      34522293        rs16902290      A       G       .       PASS    AA=G;DP=111     GT:GQ:DP        1|0:100:25      1|0:100:24      1|1:100:64
+14     98853158        rs1257334       A       G       .       PASS    AA=a;DP=115     GT:GQ:DP        1|0:100:25      1|0:100:24      1|1:100:65
+5      16209092        rs4701650       A       C       .       PASS    AA=A;DP=118     GT:GQ:DP        1|0:100:25      1|0:100:24      1|1:100:70
+6      25421677        rs9379752       C       T       .       PASS    AA=C;DP=99      GT:GQ:DP        1|0:100:25      1|0:100:25      1|1:100:50
+12     98796349        rs1352449       C       G       .       PASS    AA=G;DP=113     GT:GQ:DP        1|0:100:25      1|0:100:25      1|1:100:65
+18     52199075        rs216572        C       T       .       PASS    AA=T;DP=115     GT:GQ:DP        1|0:100:25      1|0:100:25      1|1:100:67
+7      82393378        rs6950697       G       A       .       PASS    AA=G;DP=105     GT:GQ:DP        1|0:100:25      1|0:100:25      1|1:91:54
+13     40197687        rs4941989       T       C       .       PASS    AA=C;DP=105     GT:GQ:DP        1|0:100:25      1|0:100:26      1|1:100:53
+3      180131049       rs13319930      T       G       .       PASS    AA=T;DP=121     GT:GQ:DP        1|0:100:25      1|0:100:26      1|1:100:69
+5      107070227       rs59961335      C       G       .       PASS    AA=C;DP=92      GT:GQ:DP        1|0:100:25      1|0:100:26      1|1:87:31
+5      29229905        rs6876144       G       C       .       PASS    AA=C;DP=104     GT:GQ:DP        1|0:100:25      1|0:100:26      1|1:96:50
+2      145516831       .       T       A       .       PASS    AA=T;DP=99      GT:GQ:DP        1|0:100:25      1|0:100:26      1|1:98:48
+15     23073881        rs17115429      A       G       .       PASS    AA=A;DP=112     GT:GQ:DP        1|0:100:25      1|0:100:27      1|1:100:60
+3      75123593        rs9869833       G       T       .       PASS    AA=G;DP=121     GT:GQ:DP        1|0:100:25      1|0:100:27      1|1:100:70
+4      144901819       rs10857406      G       A       .       PASS    AA=G;DP=115     GT:GQ:DP        1|0:100:25      1|0:100:28      1|1:100:61
+10     56933814        rs2050320       A       G       .       PASS    AA=A;DP=107     GT:GQ:DP        1|0:100:25      1|0:100:29      1|1:100:54
+13     90650521        rs16945507      A       T       .       PASS    AA=A;DP=114     GT:GQ:DP        1|0:100:25      1|0:100:29      1|1:100:56
+13     38414627        rs9315632       G       T       .       PASS    AA=N;DP=114     GT:GQ:DP        1|0:100:25      1|0:100:29      1|1:100:60
+3      111269351       rs1997108       A       C       .       PASS    AA=A;DP=119     GT:GQ:DP        1|0:100:25      1|0:100:29      1|1:100:66
+4      127180921       rs6813545       G       A       .       PASS    AA=G;DP=121     GT:GQ:DP        1|0:100:25      1|0:100:31      1|1:100:63
+5      5699774 rs10072644      C       T       .       PASS    AA=c;DP=145     GT:GQ:DP        1|0:100:25      1|0:100:32      1|1:100:48
+3      6075959 rs9855491       A       T       .       PASS    AA=T;DP=132     GT:GQ:DP        1|0:100:25      1|0:100:32      1|1:100:72
+2      222048326       rs62180587      T       C       .       PASS    AA=T;DP=126     GT:GQ:DP        1|0:100:25      1|0:100:35      1|1:100:65
+15     50933835        rs1899728       C       A       .       PASS    AA=A;DP=149     GT:GQ:DP        1|0:100:25      1|0:100:38      1|1:100:84
+15     90731081        rs8041550       T       C       .       PASS    AA=T;DP=99      GT:GQ:DP        1|0:100:25      1|0:36:11       1|1:100:64
+12     70159142        rs34732813      T       C       .       PASS    AA=N;DP=102     GT:GQ:DP        1|0:100:25      1|0:39:22       1|1:100:55
+1      7475048 rs1309332       T       C       .       PASS    AA=C;DP=96;HM2;HM3      GT:GQ:DP        1|0:100:25      1|0:40:13       1|1:100:44
+17     1783703 rs7208380       T       A       .       PASS    AA=T;DP=111     GT:GQ:DP        1|0:100:25      1|0:53:13       1|1:100:73
+14     104614652       .       G       A       .       PASS    AA=g;DP=88      GT:GQ:DP        1|0:100:25      1|0:55:9        1|1:100:43
+10     15628665        .       A       G       .       PASS    AA=A;DP=109     GT:GQ:DP        1|0:100:25      1|0:57:18       1|1:100:62
+21     25556497        rs9977636       G       T       .       PASS    AA=T;DP=124     GT:GQ:DP        1|0:100:25      1|0:61:17       1|1:100:75
+21     35097947        rs2834639       G       A       .       PASS    AA=G;DP=102     GT:GQ:DP        1|0:100:25      1|0:61:21       1|1:100:57
+5      44332743        rs1448044       G       A       .       PASS    AA=A;DP=99      GT:GQ:DP        1|0:100:25      1|0:63:24       1|1:100:51
+21     21311160        rs9984375       C       A       .       PASS    AA=C;DP=78      GT:GQ:DP        1|0:100:25      1|0:68:15       1|1:80:38
+18     71620140        rs6565826       C       T       .       PASS    AA=T;DP=100     GT:GQ:DP        1|0:100:25      1|0:78:20       1|1:100:41
+2      169228159       .       C       T       .       PASS    AA=C;DP=96      GT:GQ:DP        1|0:100:25      1|0:83:18       1|1:100:48
+1      198408940       rs2690035       C       T       .       PASS    AA=C;DP=125;HM2;HM3     GT:GQ:DP        1|0:100:25      1|0:83:18       1|1:100:85
+1      110810083       rs4839019       G       A       .       PASS    AA=G;DP=102     GT:GQ:DP        1|0:100:25      1|0:83:19       1|1:100:46
+9      8336219 rs10815827      A       T       .       PASS    AA=T;DP=101     GT:GQ:DP        1|0:100:25      1|0:83:21       1|1:100:55
+22     49445999        rs6010043       G       A       .       PASS    AA=A;DP=84      GT:GQ:DP        1|0:100:25      1|0:84:17       1|1:90:31
+5      84308607        rs4704026       A       C       .       PASS    AA=C;DP=95      GT:GQ:DP        1|0:100:25      1|0:85:16       1|1:100:54
+12     64513660        rs12322438      G       A       .       PASS    AA=G;DP=108     GT:GQ:DP        1|0:100:25      1|0:89:18       1|1:100:58
+4      184056921       .       T       C       .       PASS    AA=t;DP=100     GT:GQ:DP        1|0:100:25      1|0:89:23       1|1:100:52
+9      7447555 rs2997567       C       T       .       PASS    AA=T;DP=92      GT:GQ:DP        1|0:100:25      1|0:91:15       1|1:100:52
+9      92136206        rs1418937       A       T       .       PASS    AA=A;DP=81      GT:GQ:DP        1|0:100:25      1|0:91:18       1|1:59:29
+2      159226103       rs9459  C       T       .       PASS    AA=C;DP=123     GT:GQ:DP        1|0:100:25      1|0:91:25       1|1:100:73
+12     30031014        rs1909169       G       A       .       PASS    AA=A;DP=83      GT:GQ:DP        1|0:100:25      1|0:95:13       1|1:87:31
+4      12647368        rs1947852       C       T       .       PASS    AA=T;DP=75      GT:GQ:DP        1|0:100:25      1|0:96:14       1|1:66:24
+4      108528959       rs6850817       A       G       .       PASS    AA=A;DP=110     GT:GQ:DP        1|0:100:25      1|0:97:18       1|1:100:68
+2      63679668        rs7591566       C       G       .       PASS    AA=C;DP=96      GT:GQ:DP        1|0:100:25      1|0:99:21       1|1:100:38
+7      128626005       rs2718108       A       G       .       PASS    AA=G;DP=131     GT:GQ:DP        1|0:100:25      1|1:100:34      1|1:100:76
+21     45164940        rs760453        G       A       .       PASS    AA=G;DP=112     GT:GQ:DP        1|0:100:25      1|1:10:9        1|1:100:78
+6      161128574       rs10455784      C       T       .       PASS    AA=.;DP=70      GT:GQ:DP        1|0:100:25      1|1:19:17       1|1:78:26
+11     36066017        rs60924517      G       A       .       PASS    AA=G;DP=92      GT:GQ:DP        1|0:100:25      1|1:20:18       1|1:100:49
+7      156865396       rs9297109       G       A       .       PASS    AA=A;DP=91      GT:GQ:DP        1|0:100:25      1|1:24:9        1|1:100:57
+22     44873782        .       C       T       .       PASS    AA=C;DP=92      GT:GQ:DP        1|0:100:25      1|1:27:10       1|1:100:53
+17     74316798        rs58451711      T       C       .       PASS    AA=T;DP=89      GT:GQ:DP        1|0:100:25      1|1:27:20       1|1:88:44
+1      163348219       rs6686369       A       G       .       PASS    AA=A;DP=118;HM2;HM3     GT:GQ:DP        1|0:100:25      1|1:30:17       1|1:100:76
+8      20901019        rs7006595       A       G       .       PASS    AA=a;DP=113     GT:GQ:DP        1|0:100:25      1|1:30:21       1|1:100:68
+13     62802776        rs3012176       A       G       .       PASS    AA=a;DP=104     GT:GQ:DP        1|0:100:25      1|1:32:18       1|1:100:61
+22     45532223        rs801646        T       G       .       PASS    AA=G;DP=118     GT:GQ:DP        1|0:100:25      1|1:33:17       1|1:100:77
+19     56458209        rs10853828      T       G       .       PASS    AA=T;DP=86      GT:GQ:DP        1|0:100:25      1|1:36:12       1|1:79:51
+16     56539579        rs13338118      A       C       .       PASS    AA=a;DP=117     GT:GQ:DP        1|0:100:25      1|1:36:13       1|1:100:78
+6      70895872        rs2145904       A       G       .       PASS    AA=G;DP=129     GT:GQ:DP        1|0:100:25      1|1:36:23       1|1:100:82
+20     3655715 rs6052038       A       G       .       PASS    AA=N;DP=113     GT:GQ:DP        1|0:100:25      1|1:38:18       1|1:100:69
+15     67865001        rs8030599       C       T       .       PASS    AA=C;DP=82      GT:GQ:DP        1|0:100:25      1|1:41:19       1|1:50:32
+17     26751860        .       C       G       .       PASS    AA=C;DP=120     GT:GQ:DP        1|0:100:25      1|1:42:14       1|1:100:82
+2      76407666        rs1526609       C       T       .       PASS    AA=T;DP=72      GT:GQ:DP        1|0:100:25      1|1:42:15       1|1:99:33
+5      115512151       rs11957382      T       C       .       PASS    AA=C;DP=114     GT:GQ:DP        1|0:100:25      1|1:44:26       1|1:100:61
+1      85238010        rs3850430       T       C       .       PASS    AA=T;DP=114     GT:GQ:DP        1|0:100:25      1|1:44:26       1|1:100:64
+6      65034632        rs9362656       A       G       .       PASS    AA=A;DP=78      GT:GQ:DP        1|0:100:25      1|1:45:15       1|1:100:34
+10     24897821        rs12573361      T       C       .       PASS    AA=N;DP=86      GT:GQ:DP        1|0:100:25      1|1:45:15       1|1:100:35
+3      100470071       rs1972138       C       T       .       PASS    AA=T;DP=100     GT:GQ:DP        1|0:100:25      1|1:45:15       1|1:100:60
+8      4816996 rs13264559      C       A       .       PASS    AA=A;DP=98      GT:GQ:DP        1|0:100:25      1|1:45:15       1|1:100:60
+7      87995391        rs181014        G       A       .       PASS    AA=G;DP=110     GT:GQ:DP        1|0:100:25      1|1:45:17       1|1:100:64
+5      73365274        rs285601        T       C       .       PASS    AA=T;DP=102     GT:GQ:DP        1|0:100:25      1|1:48:17       1|1:100:59
+6      69251007        rs2341749       A       C       .       PASS    AA=C;DP=100     GT:GQ:DP        1|0:100:25      1|1:48:22       1|1:100:51
+3      127126806       rs12489350      T       C       .       PASS    AA=.;DP=79      GT:GQ:DP        1|0:100:25      1|1:4:5 1|1:87:41
+4      134675472       rs7686561       A       T       .       PASS    AA=T;DP=90      GT:GQ:DP        1|0:100:25      1|1:51:17       1|1:100:48
+20     7647988 rs2326961       C       T       .       PASS    AA=T;DP=98      GT:GQ:DP        1|0:100:25      1|1:51:17       1|1:100:55
+20     22854446        rs1888610       T       G       .       PASS    AA=G;DP=109     GT:GQ:DP        1|0:100:25      1|1:51:18       1|1:100:66
+5      84447140        rs62358244      A       G       .       PASS    AA=A;DP=76      GT:GQ:DP        1|0:100:25      1|1:51:19       1|1:75:26
+18     49686354        rs1498165       G       A       .       PASS    AA=A;DP=99      GT:GQ:DP        1|0:100:25      1|1:54:18       1|1:100:54
+6      139303107       rs17068142      A       C       .       PASS    AA=A;DP=83      GT:GQ:DP        1|0:100:25      1|1:54:18       1|1:87:40
+3      47676561        rs13081356      C       T       .       PASS    AA=C;DP=107     GT:GQ:DP        1|0:100:25      1|1:54:19       1|1:100:52
+6      80795896        rs239583        C       A       .       PASS    AA=A;DP=96      GT:GQ:DP        1|0:100:25      1|1:57:19       1|1:100:40
+12     91135563        rs709214        G       A       .       PASS    AA=A;DP=113     GT:GQ:DP        1|0:100:25      1|1:57:19       1|1:100:68
+11     70429169        rs2938253       A       G       .       PASS    AA=G;DP=127     GT:GQ:DP        1|0:100:25      1|1:57:21       1|1:100:83
+6      14705149        rs1891280       A       C       .       PASS    AA=A;DP=126     GT:GQ:DP        1|0:100:25      1|1:59:27       1|1:100:77
+3      105535502       rs2576333       T       G       .       PASS    AA=T;DP=93      GT:GQ:DP        1|0:100:25      1|1:60:22       1|1:100:47
+4      140081264       rs4863615       A       G       .       PASS    AA=A;DP=107     GT:GQ:DP        1|0:100:25      1|1:63:21       1|1:100:62
+3      63730791        rs1491581       T       A       .       PASS    AA=A;DP=112     GT:GQ:DP        1|0:100:25      1|1:63:21       1|1:100:69
+9      93659097        rs55956910      T       C       .       PASS    AA=C;DP=96      GT:GQ:DP        1|0:100:25      1|1:63:22       1|1:100:40
+4      45627953        rs7663141       C       T       .       PASS    AA=T;DP=97      GT:GQ:DP        1|0:100:25      1|1:66:22       1|1:100:41
+14     28618967        rs2333461       G       A       .       PASS    AA=A;DP=96      GT:GQ:DP        1|0:100:25      1|1:66:22       1|1:100:51
+11     98733273        .       T       C       .       PASS    AA=T;DP=111     GT:GQ:DP        1|0:100:25      1|1:66:22       1|1:100:64
+15     58335282        rs1858189       A       C       .       PASS    AA=C;DP=114     GT:GQ:DP        1|0:100:25      1|1:66:22       1|1:100:66
+10     91510025        rs10128186      G       A       .       PASS    AA=g;DP=104     GT:GQ:DP        1|0:100:25      1|1:69:23       1|1:100:37
+13     24752820        rs9553575       T       C       .       PASS    AA=N;DP=104     GT:GQ:DP        1|0:100:25      1|1:69:23       1|1:100:56
+9      109372390       rs7045952       T       G       .       PASS    AA=T;DP=119     GT:GQ:DP        1|0:100:25      1|1:69:23       1|1:100:63
+1      161196071       rs10732281      G       T       .       PASS    AA=t;DP=89      GT:GQ:DP        1|0:100:25      1|1:69:23       1|1:61:39
+1      234301249       rs10754850      C       A       .       PASS    AA=A;DP=98;HM3  GT:GQ:DP        1|0:100:25      1|1:69:23       1|1:97:45
+3      185740699       rs6793288       G       A       .       PASS    AA=G;DP=100     GT:GQ:DP        1|0:100:25      1|1:72:24       1|1:100:44
+11     33754513        rs11032376      A       G       .       PASS    AA=A;DP=114     GT:GQ:DP        1|0:100:25      1|1:72:25       1|1:100:64
+1      218640903       rs1578050       A       T       .       PASS    AA=A;DP=116;HM3 GT:GQ:DP        1|0:100:25      1|1:75:25       1|1:100:51
+6      69028060        rs61000353      G       A       .       PASS    AA=G;DP=103     GT:GQ:DP        1|0:100:25      1|1:75:25       1|1:100:52
+3      138396323       rs4678227       T       C       .       PASS    AA=t;DP=110     GT:GQ:DP        1|0:100:25      1|1:81:27       1|1:100:60
+2      202172890       rs7580823       G       A       .       PASS    AA=A;DP=118     GT:GQ:DP        1|0:100:25      1|1:81:27       1|1:100:65
+6      97257358        rs401858        G       A       .       PASS    AA=G;DP=138     GT:GQ:DP        1|0:100:25      1|1:81:27       1|1:100:87
+3      2752622 rs1554198       A       G       .       PASS    AA=G;DP=118     GT:GQ:DP        1|0:100:25      1|1:84:28       1|1:100:66
+12     11942221        rs2855753       C       T       .       PASS    AA=T;DP=123     GT:GQ:DP        1|0:100:25      1|1:87:30       1|1:100:65
+1      106630013       rs7532907       T       A       .       PASS    AA=T;DP=111     GT:GQ:DP        1|0:100:25      1|1:90:30       1|1:100:58
+6      169302446       rs911971        C       T       .       PASS    AA=C;DP=132     GT:GQ:DP        1|0:100:25      1|1:93:33       1|1:100:77
+4      26967565        rs2215744       G       C       .       PASS    AA=C;DP=125     GT:GQ:DP        1|0:100:25      1|1:96:33       1|1:100:64
+9      33451567        rs678859        A       G       .       PASS    AA=G;DP=79      GT:GQ:DP        1|0:100:25      1|1:9:15        1|1:53:28
+13     43582819        rs10507525      C       T       .       PASS    AA=C;DP=141     GT:GQ:DP        1|0:100:26      0|0:100:33      1|0:100:83
+1      98103116        .       G       C       .       PASS    AA=G;DP=130     GT:GQ:DP        1|0:100:26      0|0:100:34      1|0:100:71
+8      105953660       rs7004837       A       G       .       PASS    AA=A;DP=132     GT:GQ:DP        1|0:100:26      0|0:100:34      1|0:100:72
+3      181084403       .       G       A       .       PASS    AA=G;DP=117     GT:GQ:DP        1|0:100:26      0|0:100:35      1|0:100:55
+4      169386589       rs28565125      A       G       .       PASS    AA=a;DP=120     GT:GQ:DP        1|0:100:26      0|0:100:35      1|0:100:60
+12     99884183        .       A       G       .       PASS    AA=A;DP=144     GT:GQ:DP        1|0:100:26      0|0:100:36      1|0:100:85
+14     20093075        .       C       T       .       PASS    AA=N;DP=140     GT:GQ:DP        1|0:100:26      0|0:100:37      1|0:100:78
+7      10224069        rs57398535      A       G       .       PASS    AA=A;DP=141     GT:GQ:DP        1|0:100:26      0|0:100:37      1|0:100:83
+4      85128080        .       A       G       .       PASS    AA=A;DP=135     GT:GQ:DP        1|0:100:26      0|0:100:38      1|0:100:71
+8      94579095        rs11998477      G       A       .       PASS    AA=G;DP=132     GT:GQ:DP        1|0:100:26      0|0:100:38      1|0:100:71
+9      139845070       .       T       C       .       PASS    AA=T;DP=125     GT:GQ:DP        1|0:100:26      0|0:100:40      1|0:100:59
+1      176580934       rs12035174      A       T       .       PASS    AA=A;DP=135;HM2 GT:GQ:DP        1|0:100:26      0|0:100:41      1|0:100:70
+10     8170796 rs10752127      C       A       .       PASS    AA=C;DP=118     GT:GQ:DP        1|0:100:26      0|0:17:19       1|0:100:69
+5      3148388 rs2016439       C       A       .       PASS    AA=C;DP=121     GT:GQ:DP        1|0:100:26      0|0:22:21       1|0:100:75
+1      178224333       .       T       C       .       PASS    AA=T;DP=101     GT:GQ:DP        1|0:100:26      0|0:24:18       1|0:100:59
+17     20817805        rs61068168      C       G       .       PASS    AA=C;DP=91      GT:GQ:DP        1|0:100:26      0|0:29:10       1|0:100:40
+12     11064144        .       G       A       .       PASS    AA=-;DP=125     GT:GQ:DP        1|0:100:26      0|0:29:18       1|0:100:32
+1      212468868       rs10864089      A       G       .       PASS    AA=A;DP=113;HM2;HM3     GT:GQ:DP        1|0:100:26      0|0:29:20       1|0:100:70
+13     28799187        rs9551646       T       C       .       PASS    AA=N;DP=86      GT:GQ:DP        1|0:100:26      0|0:32:10       1|0:100:49
+7      161516  rs7791431       G       A       .       PASS    AA=.;DP=102     GT:GQ:DP        1|0:100:26      0|0:32:10       1|0:100:67
+9      80106933        .       C       T       .       PASS    AA=C;DP=83      GT:GQ:DP        1|0:100:26      0|0:32:11       1|0:100:46
+13     36556583        .       G       A       .       PASS    AA=A;DP=94      GT:GQ:DP        1|0:100:26      0|0:32:11       1|0:100:53
+10     12635449        rs1077744       C       T       .       PASS    AA=C;DP=90      GT:GQ:DP        1|0:100:26      0|0:32:15       1|0:100:43
+19     4217971 rs10422862      A       T       .       PASS    AA=T;DP=92      GT:GQ:DP        1|0:100:26      0|0:35:11       1|0:100:51
+7      72913437        rs11770024      T       C       .       PASS    AA=t;DP=105     GT:GQ:DP        1|0:100:26      0|0:35:11       1|0:100:67
+3      127750565       rs11713326      G       A       .       PASS    AA=G;DP=81      GT:GQ:DP        1|0:100:26      0|0:35:12       1|0:100:30
+20     55832066        rs6099786       C       T       .       PASS    AA=C;DP=102     GT:GQ:DP        1|0:100:26      0|0:35:22       1|0:100:55
+6      22264937        .       G       T       .       PASS    AA=T;DP=131     GT:GQ:DP        1|0:100:26      0|0:36:29       1|0:100:78
+6      31208980        rs3823419       G       A       .       PASS    AA=G;DP=105     GT:GQ:DP        1|0:100:26      0|0:37:16       1|0:100:61
+5      149058724       rs6873263       G       A       .       PASS    AA=G;DP=90      GT:GQ:DP        1|0:100:26      0|0:38:12       1|0:100:53
+7      77026837        rs55641721      C       T       .       PASS    AA=C;DP=93      GT:GQ:DP        1|0:100:26      0|0:38:12       1|0:100:55
+6      682039  rs11751025      T       C       .       PASS    AA=T;DP=118     GT:GQ:DP        1|0:100:26      0|0:38:13       1|0:100:82
+8      92170269        .       T       G       .       PASS    AA=T;DP=103     GT:GQ:DP        1|0:100:26      0|0:38:14       1|0:100:64
+5      68409390        rs2913711       C       T       .       PASS    AA=c;DP=84      GT:GQ:DP        1|0:100:26      0|0:38:24       1|0:100:33
+2      226050895       rs59528664      T       C       .       PASS    AA=C;DP=126     GT:GQ:DP        1|0:100:26      0|0:39:18       1|0:100:84
+2      126901321       rs11686454      A       G       .       PASS    AA=a;DP=80      GT:GQ:DP        1|0:100:26      0|0:41:13       1|0:100:29
+13     82985942        rs9318959       T       A       .       PASS    AA=T;DP=84      GT:GQ:DP        1|0:100:26      0|0:41:13       1|0:100:43
+16     45923052        rs28681341      T       A       .       PASS    AA=T;DP=84      GT:GQ:DP        1|0:100:26      0|0:41:13       1|0:100:46
+6      75484398        rs9360838       G       A       .       PASS    AA=G;DP=89      GT:GQ:DP        1|0:100:26      0|0:41:13       1|0:100:50
+12     126787294       .       T       A       .       PASS    AA=A;DP=102     GT:GQ:DP        1|0:100:26      0|0:41:13       1|0:100:63
+18     44673785        rs9947327       T       G       .       PASS    AA=T;DP=134     GT:GQ:DP        1|0:100:26      0|0:41:13       1|0:100:92
+22     43004414        .       G       A       .       PASS    AA=G;DP=114     GT:GQ:DP        1|0:100:26      0|0:41:14       1|0:100:72
+11     70493163        .       T       C       .       PASS    AA=N;DP=111     GT:GQ:DP        1|0:100:26      0|0:41:22       1|0:100:64
+7      45363439        rs1830262       A       G       .       PASS    AA=A;DP=114     GT:GQ:DP        1|0:100:26      0|0:43:25       1|0:100:62
+4      3767639 .       T       G       .       PASS    AA=G;DP=77      GT:GQ:DP        1|0:100:26      0|0:44:14       1|0:100:32
+7      148898637       rs4727091       G       A       .       PASS    AA=G;DP=87      GT:GQ:DP        1|0:100:26      0|0:44:14       1|0:100:48
+2      5982364 .       A       T       .       PASS    AA=A;DP=87      GT:GQ:DP        1|0:100:26      0|0:44:14       1|0:100:49
+19     53522098        rs10415654      T       A       .       PASS    AA=A;DP=100     GT:GQ:DP        1|0:100:26      0|0:44:14       1|0:100:63
+17     15528339        .       G       A       .       PASS    AA=G;DP=110     GT:GQ:DP        1|0:100:26      0|0:44:14       1|0:100:69
+4      187648064       .       C       T       .       PASS    AA=C;DP=111     GT:GQ:DP        1|0:100:26      0|0:44:14       1|0:100:69
+20     19208110        .       T       C       .       PASS    AA=T;DP=117     GT:GQ:DP        1|0:100:26      0|0:44:14       1|0:100:78
+13     44207914        .       G       A       .       PASS    AA=G;DP=101     GT:GQ:DP        1|0:100:26      0|0:44:15       1|0:100:50
+5      123237930       rs918463        A       G       .       PASS    AA=A;DP=115     GT:GQ:DP        1|0:100:26      0|0:44:15       1|0:100:74
+19     6957944 rs1908212       A       C       .       PASS    AA=A;DP=123     GT:GQ:DP        1|0:100:26      0|0:45:21       1|0:100:73
+1      117445253       rs60251463      G       T       .       PASS    AA=G;DP=99      GT:GQ:DP        1|0:100:26      0|0:46:25       1|0:100:44
+10     43880110        .       C       T       .       PASS    AA=C;DP=87      GT:GQ:DP        1|0:100:26      0|0:47:15       1|0:100:46
+4      35098944        .       A       G       .       PASS    AA=A;DP=92      GT:GQ:DP        1|0:100:26      0|0:47:15       1|0:100:49
+7      8160309 rs7803886       A       G       .       PASS    AA=A;DP=90      GT:GQ:DP        1|0:100:26      0|0:47:15       1|0:100:49
+10     2259665 rs10903704      T       C       .       PASS    AA=t;DP=112     GT:GQ:DP        1|0:100:26      0|0:47:15       1|0:100:65
+12     88244937        .       G       T       .       PASS    AA=G;DP=134     GT:GQ:DP        1|0:100:26      0|0:47:16       1|0:100:49
+5      83051889        .       G       A       .       PASS    AA=G;DP=112     GT:GQ:DP        1|0:100:26      0|0:47:16       1|0:100:71
+17     74232404        rs8068876       G       T       .       PASS    AA=A;DP=125     GT:GQ:DP        1|0:100:26      0|0:47:22       1|0:100:78
+7      22735835        rs2069842       G       A       .       PASS    AA=G;DP=129     GT:GQ:DP        1|0:100:26      0|0:49:22       1|0:100:79
+4      2343538 rs762844        G       T       .       PASS    AA=G;DP=99      GT:GQ:DP        1|0:100:26      0|0:50:16       1|0:100:47
+19     44411103        rs11083519      A       T       .       PASS    AA=a;DP=94      GT:GQ:DP        1|0:100:26      0|0:50:16       1|0:100:54
+10     121617974       .       C       A       .       PASS    AA=C;DP=101     GT:GQ:DP        1|0:100:26      0|0:50:16       1|0:100:59
+6      131195520       rs2236075       T       G       .       PASS    AA=T;DP=115     GT:GQ:DP        1|0:100:26      0|0:50:16       1|0:100:69
+7      149031359       rs60647533      T       C       .       PASS    AA=T;DP=121     GT:GQ:DP        1|0:100:26      0|0:50:16       1|0:100:76
+1      111661361       rs12034576      T       G       .       PASS    AA=T;DP=137;HM2;HM3     GT:GQ:DP        1|0:100:26      0|0:50:16       1|0:100:80
+4      44211271        .       T       C       .       PASS    AA=T;DP=109     GT:GQ:DP        1|0:100:26      0|0:50:17       1|0:100:65
+17     9959467 rs11078832      A       G       .       PASS    AA=A;DP=115     GT:GQ:DP        1|0:100:26      0|0:50:17       1|0:100:73
+6      170239521       rs11758689      G       A       .       PASS    AA=G;DP=118     GT:GQ:DP        1|0:100:26      0|0:50:17       1|0:100:76
+3      118717800       .       G       T       .       PASS    AA=G;DP=129     GT:GQ:DP        1|0:100:26      0|0:50:17       1|0:100:86
+11     18020863        rs7129561       A       G       .       PASS    AA=A;DP=89      GT:GQ:DP        1|0:100:26      0|0:50:19       1|0:100:41
+5      176362504       rs353496        T       C       .       PASS    AA=T;DP=126     GT:GQ:DP        1|0:100:26      0|0:50:19       1|0:100:79
+8      17909977        rs58727450      G       A       .       PASS    AA=G;DP=115     GT:GQ:DP        1|0:100:26      0|0:50:21       1|0:100:69
+3      146993371       .       G       A       .       PASS    AA=G;DP=107     GT:GQ:DP        1|0:100:26      0|0:52:28       1|0:100:54
+4      79758345        .       C       G       .       PASS    AA=C;DP=98      GT:GQ:DP        1|0:100:26      0|0:53:17       1|0:100:42
+11     28685084        rs12288697      G       C       .       PASS    AA=G;DP=106     GT:GQ:DP        1|0:100:26      0|0:53:17       1|0:100:64
+6      101178009       .       A       G       .       PASS    AA=A;DP=110     GT:GQ:DP        1|0:100:26      0|0:53:17       1|0:100:68
+3      140587671       rs9871030       T       C       .       PASS    AA=N;DP=113     GT:GQ:DP        1|0:100:26      0|0:53:17       1|0:100:72
+9      90630753        rs9410371       A       T       .       PASS    AA=T;DP=126     GT:GQ:DP        1|0:100:26      0|0:53:17       1|0:100:75
+12     129201158       rs12305135      T       C       .       PASS    AA=T;DP=115     GT:GQ:DP        1|0:100:26      0|0:53:18       1|0:100:72
+3      21659349        rs57131452      C       G       .       PASS    AA=C;DP=96      GT:GQ:DP        1|0:100:26      0|0:53:19       1|0:100:52
+13     69330285        rs17085537      C       T       .       PASS    AA=C;DP=113     GT:GQ:DP        1|0:100:26      0|0:53:19       1|0:100:68
+5      94403561        rs4988879       C       T       .       PASS    AA=T;DP=119     GT:GQ:DP        1|0:100:26      0|0:55:25       1|0:100:71
+10     86401634        .       G       A       .       PASS    AA=G;DP=84      GT:GQ:DP        1|0:100:26      0|0:56:18       1|0:100:40
+19     40350244        rs10419853      C       G       .       PASS    AA=C;DP=100     GT:GQ:DP        1|0:100:26      0|0:56:18       1|0:100:48
+15     31220590        rs2468748       C       A       .       PASS    AA=C;DP=93      GT:GQ:DP        1|0:100:26      0|0:56:18       1|0:100:51
+4      54496306        rs17083718      A       G       .       PASS    AA=G;DP=97      GT:GQ:DP        1|0:100:26      0|0:56:18       1|0:100:55
+2      53239831        .       C       T       .       PASS    AA=C;DP=101     GT:GQ:DP        1|0:100:26      0|0:56:18       1|0:100:57
+10     12039049        .       C       A       .       PASS    AA=C;DP=107     GT:GQ:DP        1|0:100:26      0|0:56:18       1|0:100:61
+17     61188164        .       T       C       .       PASS    AA=T;DP=108     GT:GQ:DP        1|0:100:26      0|0:56:18       1|0:100:65
+16     83340011        rs16974515      T       G       .       PASS    AA=G;DP=115     GT:GQ:DP        1|0:100:26      0|0:56:18       1|0:100:72
+9      115969623       rs57113194      C       T       .       PASS    AA=C;DP=117     GT:GQ:DP        1|0:100:26      0|0:56:18       1|0:100:72
+17     26903805        rs7209350       A       G       .       PASS    AA=G;DP=119     GT:GQ:DP        1|0:100:26      0|0:56:18       1|0:100:75
+17     76472480        rs11656246      G       A       .       PASS    AA=G;DP=122     GT:GQ:DP        1|0:100:26      0|0:56:18       1|0:100:77
+1      163536052       .       C       T       .       PASS    AA=C;DP=129     GT:GQ:DP        1|0:100:26      0|0:56:18       1|0:100:85
+12     16310918        rs7966021       C       T       .       PASS    AA=C;DP=104     GT:GQ:DP        1|0:100:26      0|0:56:19       1|0:100:60
+12     9981548 rs7972089       C       T       .       PASS    AA=T;DP=111     GT:GQ:DP        1|0:100:26      0|0:56:19       1|0:100:63
+3      160500295       rs61795244      C       T       .       PASS    AA=C;DP=117     GT:GQ:DP        1|0:100:26      0|0:56:19       1|0:100:73
+2      229991554       rs6735031       A       G       .       PASS    AA=A;DP=102     GT:GQ:DP        1|0:100:26      0|0:56:20       1|0:100:55
+8      84128389        rs62514136      A       T       .       PASS    AA=A;DP=101     GT:GQ:DP        1|0:100:26      0|0:56:20       1|0:100:56
+8      30545489        rs59263085      A       G       .       PASS    AA=A;DP=101     GT:GQ:DP        1|0:100:26      0|0:56:22       1|0:100:54
+1      149820542       rs10494267      C       T       .       PASS    AA=C;DP=135;HM2;HM3     GT:GQ:DP        1|0:100:26      0|0:58:28       1|0:100:80
+X      541457  rs28436950      G       A       .       PASS    AA=g;DP=86      GT:GQ:DP        1|0:100:26      0|0:59:19       1|0:100:37
+17     28569266        .       C       T       .       PASS    AA=C;DP=93      GT:GQ:DP        1|0:100:26      0|0:59:19       1|0:100:48
+13     113118782       rs58023372      G       A       .       PASS    AA=g;DP=100     GT:GQ:DP        1|0:100:26      0|0:59:19       1|0:100:55
+1      103119936       rs12086094      T       C       .       PASS    AA=T;DP=106;HM2;HM3     GT:GQ:DP        1|0:100:26      0|0:59:19       1|0:100:61
+11     38012867        rs11034567      C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        1|0:100:26      0|0:59:19       1|0:100:68
+7      158438304       rs60362847      C       G       .       PASS    AA=C;DP=120     GT:GQ:DP        1|0:100:26      0|0:59:19       1|0:100:74
+7      110241313       rs58783052      T       C       .       PASS    AA=T;DP=99      GT:GQ:DP        1|0:100:26      0|0:59:20       1|0:100:55
+16     75183544        rs9934795       A       G       .       PASS    AA=A;DP=110     GT:GQ:DP        1|0:100:26      0|0:59:20       1|0:100:63
+20     2163145 rs6137407       A       G       .       PASS    AA=G;DP=112     GT:GQ:DP        1|0:100:26      0|0:59:20       1|0:100:68
+4      60803486        rs59679503      C       T       .       PASS    AA=C;DP=117     GT:GQ:DP        1|0:100:26      0|0:59:20       1|0:100:71
+9      18784533        .       A       T       .       PASS    AA=A;DP=118     GT:GQ:DP        1|0:100:26      0|0:59:20       1|0:100:75
+6      137504847       rs85462 C       G       .       PASS    AA=C;DP=123     GT:GQ:DP        1|0:100:26      0|0:59:20       1|0:100:77
+18     60465067        rs61151181      G       A       .       PASS    AA=g;DP=95      GT:GQ:DP        1|0:100:26      0|0:59:21       1|0:100:40
+13     36914057        rs9576269       A       G       .       PASS    AA=A;DP=98      GT:GQ:DP        1|0:100:26      0|0:59:21       1|0:100:54
+15     96088159        .       A       T       .       PASS    AA=A;DP=102     GT:GQ:DP        1|0:100:26      0|0:59:21       1|0:100:56
+5      123321912       rs972144        T       C       .       PASS    AA=T;DP=90      GT:GQ:DP        1|0:100:26      0|0:62:20       1|0:100:29
+10     93713804        .       G       A       .       PASS    AA=G;DP=90      GT:GQ:DP        1|0:100:26      0|0:62:20       1|0:100:44
+11     101738956       rs2509319       T       C       .       PASS    AA=T;DP=97      GT:GQ:DP        1|0:100:26      0|0:62:20       1|0:100:48
+6      37961076        .       C       T       .       PASS    AA=C;DP=97      GT:GQ:DP        1|0:100:26      0|0:62:20       1|0:100:50
+10     124804471       rs11248371      A       T       .       PASS    AA=A;DP=99      GT:GQ:DP        1|0:100:26      0|0:62:20       1|0:100:53
+7      126582199       rs11980964      A       T       .       PASS    AA=A;DP=103     GT:GQ:DP        1|0:100:26      0|0:62:20       1|0:100:55
+8      120015570       rs11573902      T       G       .       PASS    AA=T;DP=105     GT:GQ:DP        1|0:100:26      0|0:62:20       1|0:100:57
+6      4254975 rs1034033       C       A       .       PASS    AA=C;DP=111     GT:GQ:DP        1|0:100:26      0|0:62:20       1|0:100:65
+2      147766346       .       C       T       .       PASS    AA=C;DP=112     GT:GQ:DP        1|0:100:26      0|0:62:20       1|0:100:69
+9      107866164       .       A       G       .       PASS    AA=a;DP=115     GT:GQ:DP        1|0:100:26      0|0:62:20       1|0:100:70
+2      240382887       rs9941669       C       T       .       PASS    AA=-;DP=116     GT:GQ:DP        1|0:100:26      0|0:62:20       1|0:100:73
+5      91860443        .       A       T       .       PASS    AA=A;DP=122     GT:GQ:DP        1|0:100:26      0|0:62:21       1|0:100:75
+7      121534014       rs59987971      T       G       .       PASS    AA=T;DP=123     GT:GQ:DP        1|0:100:26      0|0:63:26       1|0:100:64
+21     16904055        rs9305771       T       C       .       PASS    AA=N;DP=112     GT:GQ:DP        1|0:100:26      0|0:63:27       1|0:100:58
+8      118195788       rs16889413      T       C       .       PASS    AA=C;DP=142     GT:GQ:DP        1|0:100:26      0|0:63:32       1|0:100:46
+6      158290892       rs2364348       G       A       .       PASS    AA=A;DP=94      GT:GQ:DP        1|0:100:26      0|0:64:27       1|0:100:40
+3      54147501        rs9311523       A       G       .       PASS    AA=A;DP=125     GT:GQ:DP        1|0:100:26      0|0:64:29       1|0:100:74
+6      139121829       rs9495237       T       C       .       PASS    AA=T;DP=105     GT:GQ:DP        1|0:100:26      0|0:65:21       1|0:100:47
+7      71147712        .       T       G       .       PASS    AA=T;DP=105     GT:GQ:DP        1|0:100:26      0|0:65:21       1|0:100:48
+8      18520735        .       C       T       .       PASS    AA=C;DP=112     GT:GQ:DP        1|0:100:26      0|0:65:21       1|0:100:63
+6      89967434        rs12198870      C       T       .       PASS    AA=C;DP=116     GT:GQ:DP        1|0:100:26      0|0:65:21       1|0:100:69
+8      57300665        .       A       C       .       PASS    AA=A;DP=124     GT:GQ:DP        1|0:100:26      0|0:65:21       1|0:100:74
+13     98934589        .       T       C       .       PASS    AA=C;DP=125     GT:GQ:DP        1|0:100:26      0|0:65:21       1|0:100:76
+2      229353484       .       G       C       .       PASS    AA=G;DP=127     GT:GQ:DP        1|0:100:26      0|0:65:21       1|0:100:83
+5      8886995 rs1604976       C       A       .       PASS    AA=C;DP=131     GT:GQ:DP        1|0:100:26      0|0:65:21       1|0:100:85
+3      99391190        .       T       C       .       PASS    AA=T;DP=134     GT:GQ:DP        1|0:100:26      0|0:65:21       1|0:100:87
+8      130549387       .       T       C       .       PASS    AA=T;DP=96      GT:GQ:DP        1|0:100:26      0|0:65:22       1|0:100:39
+4      152609444       .       C       T       .       PASS    AA=C;DP=116     GT:GQ:DP        1|0:100:26      0|0:65:22       1|0:100:67
+8      4356085 .       A       G       .       PASS    AA=A;DP=139     GT:GQ:DP        1|0:100:26      0|0:65:22       1|0:100:92
+18     68262049        rs12956432      T       A       .       PASS    AA=T;DP=109     GT:GQ:DP        1|0:100:26      0|0:65:23       1|0:100:62
+5      76462756        rs6859104       A       G       .       PASS    AA=A;DP=127     GT:GQ:DP        1|0:100:26      0|0:65:23       1|0:100:73
+9      10800659        rs10959310      G       T       .       PASS    AA=T;DP=115     GT:GQ:DP        1|0:100:26      0|0:65:27       1|0:100:64
+6      146439990       rs6570737       A       T       .       PASS    AA=A;DP=120     GT:GQ:DP        1|0:100:26      0|0:66:27       1|0:100:67
+3      31427674        .       G       A       .       PASS    AA=A;DP=119     GT:GQ:DP        1|0:100:26      0|0:66:29       1|0:100:63
+18     32006251        rs57494619      G       A       .       PASS    AA=G;DP=134     GT:GQ:DP        1|0:100:26      0|0:68:22       1|0:100:42
+22     26338952        rs11913376      G       A       .       PASS    AA=G;DP=151     GT:GQ:DP        1|0:100:26      0|0:68:22       1|0:100:54
+15     24543784        rs28656315      G       A       .       PASS    AA=G;DP=101     GT:GQ:DP        1|0:100:26      0|0:68:22       1|0:100:55
+2      145700550       .       T       G       .       PASS    AA=G;DP=106     GT:GQ:DP        1|0:100:26      0|0:68:22       1|0:100:55
+3      176693910       .       A       G       .       PASS    AA=A;DP=108     GT:GQ:DP        1|0:100:26      0|0:68:22       1|0:100:59
+9      23200153        rs10965700      G       A       .       PASS    AA=G;DP=112     GT:GQ:DP        1|0:100:26      0|0:68:22       1|0:100:63
+3      10375643        rs28113 G       A       .       PASS    AA=A;DP=117     GT:GQ:DP        1|0:100:26      0|0:68:22       1|0:100:71
+9      24360325        rs12004483      A       T       .       PASS    AA=A;DP=128     GT:GQ:DP        1|0:100:26      0|0:68:22       1|0:100:82
+1      76751192        rs452952        T       C       .       PASS    AA=T;DP=117     GT:GQ:DP        1|0:100:26      0|0:68:23       1|0:100:61
+10     87048017        rs2221982       G       A       .       PASS    AA=G;DP=113     GT:GQ:DP        1|0:100:26      0|0:68:23       1|0:100:62
+2      60484021        rs11883826      A       G       .       PASS    AA=G;DP=119     GT:GQ:DP        1|0:100:26      0|0:68:24       1|0:100:70
+18     25326984        rs55911626      G       A       .       PASS    AA=A;DP=128     GT:GQ:DP        1|0:100:26      0|0:68:24       1|0:100:76
+4      120064533       .       T       C       .       PASS    AA=T;DP=104     GT:GQ:DP        1|0:100:26      0|0:71:23       1|0:100:41
+5      62989487        rs7704033       A       C       .       PASS    AA=C;DP=133     GT:GQ:DP        1|0:100:26      0|0:71:23       1|0:100:46
+17     72870947        .       A       C       .       PASS    AA=A;DP=143     GT:GQ:DP        1|0:100:26      0|0:71:23       1|0:100:47
+11     44621189        rs58070967      C       T       .       PASS    AA=C;DP=116     GT:GQ:DP        1|0:100:26      0|0:71:23       1|0:100:67
+4      64175374        .       G       A       .       PASS    AA=G;DP=115     GT:GQ:DP        1|0:100:26      0|0:71:23       1|0:100:67
+3      62054802        rs11714506      A       G       .       PASS    AA=a;DP=115     GT:GQ:DP        1|0:100:26      0|0:71:23       1|0:100:70
+12     40427093        rs1497166       T       C       .       PASS    AA=T;DP=119     GT:GQ:DP        1|0:100:26      0|0:71:23       1|0:100:71
+11     100320249       .       C       T       .       PASS    AA=C;DP=121     GT:GQ:DP        1|0:100:26      0|0:71:23       1|0:100:73
+11     68143713        .       G       A       .       PASS    AA=G;DP=121     GT:GQ:DP        1|0:100:26      0|0:71:23       1|0:100:73
+2      134237618       .       T       C       .       PASS    AA=T;DP=138     GT:GQ:DP        1|0:100:26      0|0:71:23       1|0:100:85
+15     68387823        .       T       C       .       PASS    AA=C;DP=142     GT:GQ:DP        1|0:100:26      0|0:71:23       1|0:100:93
+18     8427666 .       C       A       .       PASS    AA=C;DP=143     GT:GQ:DP        1|0:100:26      0|0:71:23       1|0:100:97
+3      170596558       rs62294301      G       A       .       PASS    AA=G;DP=92      GT:GQ:DP        1|0:100:26      0|0:71:24       1|0:100:31
+4      181021898       rs10005113      C       T       .       PASS    AA=C;DP=89      GT:GQ:DP        1|0:100:26      0|0:71:24       1|0:100:38
+1      44016770        rs11590279      C       T       .       PASS    AA=C;DP=103     GT:GQ:DP        1|0:100:26      0|0:71:24       1|0:100:52
+17     45056301        .       G       A       .       PASS    AA=G;DP=131     GT:GQ:DP        1|0:100:26      0|0:71:24       1|0:100:81
+13     28909651        .       A       G       .       PASS    AA=A;DP=144     GT:GQ:DP        1|0:100:26      0|0:71:25       1|0:100:45
+6      2355032 rs12529088      G       A       .       PASS    AA=g;DP=107     GT:GQ:DP        1|0:100:26      0|0:71:25       1|0:100:55
+X      491597  .       G       A       .       PASS    AA=.;DP=90      GT:GQ:DP        1|0:100:26      0|0:71:29       1|0:100:34
+9      10047920        rs421888        T       C       .       PASS    AA=T;DP=113     GT:GQ:DP        1|0:100:26      0|0:71:29       1|0:100:58
+8      3504309 rs60536879      T       G       .       PASS    AA=T;DP=130     GT:GQ:DP        1|0:100:26      0|0:72:29       1|0:100:78
+9      13824071        .       C       T       .       PASS    AA=T;DP=106     GT:GQ:DP        1|0:100:26      0|0:74:24       1|0:100:56
+13     97180185        .       C       A       .       PASS    AA=C;DP=105     GT:GQ:DP        1|0:100:26      0|0:74:24       1|0:100:59
+19     59215470        rs7246397       C       T       .       PASS    AA=C;DP=112     GT:GQ:DP        1|0:100:26      0|0:74:24       1|0:100:59
+2      117263718       .       C       T       .       PASS    AA=c;DP=115     GT:GQ:DP        1|0:100:26      0|0:74:24       1|0:100:64
+13     38373193        .       G       C       .       PASS    AA=G;DP=115     GT:GQ:DP        1|0:100:26      0|0:74:24       1|0:100:65
+9      126578236       .       C       A       .       PASS    AA=C;DP=114     GT:GQ:DP        1|0:100:26      0|0:74:24       1|0:100:69
+18     64000358        rs12957718      C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        1|0:100:26      0|0:74:24       1|0:100:70
+11     130088853       rs11222275      C       T       .       PASS    AA=C;DP=122     GT:GQ:DP        1|0:100:26      0|0:74:24       1|0:100:72
+18     3026700 .       G       A       .       PASS    AA=g;DP=122     GT:GQ:DP        1|0:100:26      0|0:74:24       1|0:100:74
+4      81127962        rs28842234      T       C       .       PASS    AA=T;DP=125     GT:GQ:DP        1|0:100:26      0|0:74:24       1|0:100:74
+10     90121960        .       T       C       .       PASS    AA=T;DP=132     GT:GQ:DP        1|0:100:26      0|0:74:24       1|0:100:79
+2      183091542       rs60122505      G       A       .       PASS    AA=G;DP=131     GT:GQ:DP        1|0:100:26      0|0:74:24       1|0:100:80
+5      32482876        .       C       G       .       PASS    AA=C;DP=133     GT:GQ:DP        1|0:100:26      0|0:74:24       1|0:100:83
+2      114482187       rs11893923      T       C       .       PASS    AA=T;DP=139     GT:GQ:DP        1|0:100:26      0|0:74:24       1|0:100:90
+17     50349877        rs58611088      T       C       .       PASS    AA=T;DP=82      GT:GQ:DP        1|0:100:26      0|0:74:25       1|0:100:25
+4      60428904        .       A       G       .       PASS    AA=A;DP=107     GT:GQ:DP        1|0:100:26      0|0:74:25       1|0:100:51
+11     30521289        rs538630        T       A       .       PASS    AA=A;DP=108     GT:GQ:DP        1|0:100:26      0|0:74:25       1|0:100:55
+8      4404074 rs6992238       G       C       .       PASS    AA=T;DP=109     GT:GQ:DP        1|0:100:26      0|0:74:25       1|0:100:59
+1      78375655        rs614963        A       G       .       PASS    AA=A;DP=113;HM2 GT:GQ:DP        1|0:100:26      0|0:74:25       1|0:100:63
+20     46909684        .       G       A       .       PASS    AA=G;DP=123     GT:GQ:DP        1|0:100:26      0|0:74:25       1|0:100:70
+5      147245459       rs1594666       C       G       .       PASS    AA=G;DP=130     GT:GQ:DP        1|0:100:26      0|0:74:25       1|0:100:79
+18     28026757        rs2289544       G       A       .       PASS    AA=G;DP=112     GT:GQ:DP        1|0:100:26      0|0:74:26       1|0:100:63
+16     12359496        .       G       A       .       PASS    AA=g;DP=139     GT:GQ:DP        1|0:100:26      0|0:75:31       1|0:100:41
+12     30515964        .       T       C       .       PASS    AA=T;DP=134     GT:GQ:DP        1|0:100:26      0|0:77:25       1|0:100:35
+21     20805840        rs7282918       T       C       .       PASS    AA=T;DP=140     GT:GQ:DP        1|0:100:26      0|0:77:25       1|0:100:43
+14     22636314        rs3742484       A       T       .       PASS    AA=T;DP=101     GT:GQ:DP        1|0:100:26      0|0:77:25       1|0:100:52
+11     83309407        rs1483396       C       T       .       PASS    AA=C;DP=99      GT:GQ:DP        1|0:100:26      0|0:77:25       1|0:100:53
+8      72010493        .       A       G       .       PASS    AA=A;DP=110     GT:GQ:DP        1|0:100:26      0|0:77:25       1|0:100:61
+4      150045427       rs864093        C       A       .       PASS    AA=c;DP=112     GT:GQ:DP        1|0:100:26      0|0:77:25       1|0:100:62
+12     37812769        rs58503498      T       C       .       PASS    AA=t;DP=118     GT:GQ:DP        1|0:100:26      0|0:77:25       1|0:100:69
+13     80200010        rs17073189      T       G       .       PASS    AA=T;DP=117     GT:GQ:DP        1|0:100:26      0|0:77:25       1|0:100:70
+4      55959698        rs1011095       C       G       .       PASS    AA=G;DP=121     GT:GQ:DP        1|0:100:26      0|0:77:25       1|0:100:71
+10     14135378        rs12268261      G       A       .       PASS    AA=G;DP=123     GT:GQ:DP        1|0:100:26      0|0:77:25       1|0:100:74
+4      146769251       .       T       C       .       PASS    AA=T;DP=125     GT:GQ:DP        1|0:100:26      0|0:77:25       1|0:100:76
+5      61745070        rs6864377       A       G       .       PASS    AA=A;DP=142     GT:GQ:DP        1|0:100:26      0|0:77:26       1|0:100:51
+15     43552382        rs59428500      G       A       .       PASS    AA=G;DP=111     GT:GQ:DP        1|0:100:26      0|0:77:26       1|0:100:59
+6      107620141       .       C       G       .       PASS    AA=G;DP=128     GT:GQ:DP        1|0:100:26      0|0:77:26       1|0:100:77
+9      15441805        .       C       G       .       PASS    AA=C;DP=132     GT:GQ:DP        1|0:100:26      0|0:77:26       1|0:100:77
+11     4603273 .       T       C       .       PASS    AA=T;DP=114     GT:GQ:DP        1|0:100:26      0|0:77:27       1|0:100:62
+11     23739643        .       G       C       .       PASS    AA=.;DP=122     GT:GQ:DP        1|0:100:26      0|0:77:27       1|0:100:65
+10     98305477        rs12766248      T       C       .       PASS    AA=T;DP=101     GT:GQ:DP        1|0:100:26      0|0:80:26       1|0:100:45
+10     20648780        rs11011960      T       C       .       PASS    AA=T;DP=107     GT:GQ:DP        1|0:100:26      0|0:80:26       1|0:100:54
+13     36280777        .       A       G       .       PASS    AA=A;DP=107     GT:GQ:DP        1|0:100:26      0|0:80:26       1|0:100:57
+2      62724807        rs1386399       G       A       .       PASS    AA=G;DP=114     GT:GQ:DP        1|0:100:26      0|0:80:26       1|0:100:60
+1      207155924       .       G       A       .       PASS    AA=G;DP=130     GT:GQ:DP        1|0:100:26      0|0:80:26       1|0:100:65
+14     21717057        rs10150282      C       A       .       PASS    AA=C;DP=132     GT:GQ:DP        1|0:100:26      0|0:80:26       1|0:100:83
+8      6216215 rs2920620       A       G       .       PASS    AA=G;DP=115     GT:GQ:DP        1|0:100:26      0|0:80:27       1|0:100:63
+6      16175923        rs1543319       C       G       .       PASS    AA=C;DP=119     GT:GQ:DP        1|0:100:26      0|0:80:27       1|0:100:64
+22     41733787        rs5759083       G       A       .       PASS    AA=G;DP=128     GT:GQ:DP        1|0:100:26      0|0:80:27       1|0:100:71
+10     69677014        rs1900020       A       G       .       PASS    AA=A;DP=124     GT:GQ:DP        1|0:100:26      0|0:80:28       1|0:100:68
+8      109149920       .       G       A       .       PASS    AA=G;DP=125     GT:GQ:DP        1|0:100:26      0|0:83:27       1|0:100:36
+3      105112286       rs35592817      G       A       .       PASS    AA=A;DP=110     GT:GQ:DP        1|0:100:26      0|0:83:27       1|0:100:57
+2      236489044       rs6414041       G       A       .       PASS    AA=G;DP=113     GT:GQ:DP        1|0:100:26      0|0:83:27       1|0:100:59
+2      186404614       rs2302914       C       G       .       PASS    AA=G;DP=115     GT:GQ:DP        1|0:100:26      0|0:83:27       1|0:100:63
+6      5043051 rs442730        T       C       .       PASS    AA=T;DP=140     GT:GQ:DP        1|0:100:26      0|0:83:27       1|0:100:86
+1      179741676       .       G       A       .       PASS    AA=G;DP=109     GT:GQ:DP        1|0:100:26      0|0:83:28       1|0:100:46
+2      58486135        .       C       T       .       PASS    AA=C;DP=106     GT:GQ:DP        1|0:100:26      0|0:83:28       1|0:100:53
+3      147463331       rs59202860      T       A       .       PASS    AA=T;DP=114     GT:GQ:DP        1|0:100:26      0|0:83:28       1|0:100:63
+7      89282103        rs1858966       T       C       .       PASS    AA=T;DP=116     GT:GQ:DP        1|0:100:26      0|0:83:28       1|0:100:63
+1      242515639       rs6695873       G       A       .       PASS    AA=G;DP=122;HM2;HM3     GT:GQ:DP        1|0:100:26      0|0:83:28       1|0:100:65
+18     65242579        rs1372766       C       T       .       PASS    AA=C;DP=131     GT:GQ:DP        1|0:100:26      0|0:83:33       1|0:100:71
+1      56132401        rs6684428       T       A       .       PASS    AA=T;DP=143;HM2 GT:GQ:DP        1|0:100:26      0|0:84:33       1|0:100:79
+12     94900222        rs17024937      T       C       .       PASS    AA=T;DP=92      GT:GQ:DP        1|0:100:26      0|0:86:28       1|0:100:40
+16     9476746 rs2314671       A       G       .       PASS    AA=A;DP=139     GT:GQ:DP        1|0:100:26      0|0:86:28       1|0:100:46
+13     62455810        .       T       A       .       PASS    AA=T;DP=115     GT:GQ:DP        1|0:100:26      0|0:86:28       1|0:100:62
+13     66975757        rs11618001      G       A       .       PASS    AA=A;DP=116     GT:GQ:DP        1|0:100:26      0|0:86:28       1|0:100:62
+13     73376809        .       C       T       .       PASS    AA=C;DP=128     GT:GQ:DP        1|0:100:26      0|0:86:28       1|0:100:74
+3      147434531       .       T       C       .       PASS    AA=T;DP=128     GT:GQ:DP        1|0:100:26      0|0:86:28       1|0:100:74
+19     21549875        .       G       C       .       PASS    AA=g;DP=122     GT:GQ:DP        1|0:100:26      0|0:86:29       1|0:100:62
+9      118713266       .       C       T       .       PASS    AA=C;DP=138     GT:GQ:DP        1|0:100:26      0|0:86:29       1|0:100:65
+15     64402010        .       A       T       .       PASS    AA=A;DP=132     GT:GQ:DP        1|0:100:26      0|0:87:35       1|0:100:73
+5      151168251       .       A       G       .       PASS    AA=A;DP=128     GT:GQ:DP        1|0:100:26      0|0:89:29       1|0:100:73
+1      230683738       .       A       G       .       PASS    AA=A;DP=126     GT:GQ:DP        1|0:100:26      0|0:89:30       1|0:100:70
+11     127572552       rs12363646      T       C       .       PASS    AA=T;DP=121     GT:GQ:DP        1|0:100:26      0|0:89:31       1|0:100:65
+10     28741867        rs7082692       T       C       .       PASS    AA=T;DP=90      GT:GQ:DP        1|0:100:26      0|0:8:10        1|0:100:53
+22     40811358        rs7289592       T       A       .       PASS    AA=A;DP=84      GT:GQ:DP        1|0:100:26      0|0:8:14        1|0:100:36
+19     60885474        rs11882031      T       C       .       PASS    AA=C;DP=132     GT:GQ:DP        1|0:100:26      0|0:92:30       1|0:100:78
+22     46012653        rs9615477       A       G       .       PASS    AA=G;DP=144     GT:GQ:DP        1|0:100:26      0|0:92:30       1|0:100:89
+20     42614358        .       G       C       .       PASS    AA=G;DP=120     GT:GQ:DP        1|0:100:26      0|0:92:31       1|0:100:67
+2      82317484        rs34267756      T       C       .       PASS    AA=T;DP=124     GT:GQ:DP        1|0:100:26      0|0:95:31       1|0:100:67
+18     21423035        .       T       C       .       PASS    AA=T;DP=129     GT:GQ:DP        1|0:100:26      0|0:95:31       1|0:100:73
+14     91783036        .       T       C       .       PASS    AA=T;DP=131     GT:GQ:DP        1|0:100:26      0|0:95:31       1|0:100:74
+6      124429862       rs6902462       A       G       .       PASS    AA=a;DP=142     GT:GQ:DP        1|0:100:26      0|0:98:32       1|0:100:84
+16     81718564        rs61154410      G       C       .       PASS    AA=G;DP=136     GT:GQ:DP        1|0:100:26      0|0:98:33       1|0:100:76
+5      117360098       .       A       G       .       PASS    AA=G;DP=85      GT:GQ:DP        1|0:100:26      1|0:100:14      1|1:100:47
+3      126004209       rs2650067       C       T       .       PASS    AA=C;DP=100     GT:GQ:DP        1|0:100:26      1|0:100:14      1|1:100:50
+3      42191469        rs11129944      A       G       .       PASS    AA=G;DP=91      GT:GQ:DP        1|0:100:26      1|0:100:14      1|1:100:53
+1      225151283       rs2802268       T       G       .       PASS    AA=T;DP=126;HM2;HM3     GT:GQ:DP        1|0:100:26      1|0:100:15      1|1:100:87
+2      142078104       rs1471673       A       C       .       PASS    AA=A;DP=92      GT:GQ:DP        1|0:100:26      1|0:100:16      1|1:82:51
+13     94942923        rs4394950       T       C       .       PASS    AA=C;DP=118     GT:GQ:DP        1|0:100:26      1|0:100:17      1|1:100:71
+6      103025053       rs562589        G       C       .       PASS    AA=G;DP=86      GT:GQ:DP        1|0:100:26      1|0:100:17      1|1:91:41
+11     98297819        rs2054338       C       T       .       PASS    AA=A;DP=99      GT:GQ:DP        1|0:100:26      1|0:100:18      1|1:100:58
+18     58724461        .       G       C       .       PASS    AA=G;DP=108     GT:GQ:DP        1|0:100:26      1|0:100:19      1|1:100:64
+4      340579  rs6825544       G       A       .       PASS    AA=A;DP=106     GT:GQ:DP        1|0:100:26      1|0:100:20      1|1:100:60
+11     28612640        rs7942078       A       T       .       PASS    AA=A;DP=115     GT:GQ:DP        1|0:100:26      1|0:100:20      1|1:100:72
+2      115589266       rs4277531       C       T       .       PASS    AA=T;DP=139     GT:GQ:DP        1|0:100:26      1|0:100:20      1|1:100:86
+6      63729645        .       G       A       .       PASS    AA=G;DP=111     GT:GQ:DP        1|0:100:26      1|0:100:21      1|1:100:64
+9      35434482        rs7864635       T       C       .       PASS    AA=T;DP=99      GT:GQ:DP        1|0:100:26      1|0:100:21      1|1:70:54
+3      134140537       rs7640119       A       G       .       PASS    AA=A;DP=86      GT:GQ:DP        1|0:100:26      1|0:100:21      1|1:87:30
+1      218142896       rs6694079       T       A       .       PASS    AA=A;DP=115;HM2 GT:GQ:DP        1|0:100:26      1|0:100:22      1|1:100:61
+2      231582846       rs11691545      A       G       .       PASS    AA=A;DP=109     GT:GQ:DP        1|0:100:26      1|0:100:22      1|1:100:61
+6      132350502       rs233911        A       T       .       PASS    AA=T;DP=112     GT:GQ:DP        1|0:100:26      1|0:100:23      1|1:100:50
+15     98008093        rs12593522      G       A       .       PASS    AA=G;DP=135     GT:GQ:DP        1|0:100:26      1|0:100:23      1|1:100:73
+14     33279142        rs58550054      A       T       .       PASS    AA=T;DP=105     GT:GQ:DP        1|0:100:26      1|0:100:23      1|1:48:55
+16     52739151        .       T       C       .       PASS    AA=T;DP=106     GT:GQ:DP        1|0:100:26      1|0:100:24      1|1:100:44
+18     51222764        .       A       G       .       PASS    AA=A;DP=109     GT:GQ:DP        1|0:100:26      1|0:100:24      1|1:100:60
+1      115696900       rs12405977      A       G       .       PASS    AA=A;DP=131;HM2;HM3     GT:GQ:DP        1|0:100:26      1|0:100:24      1|1:100:83
+5      109252012       .       A       G       .       PASS    AA=A;DP=97      GT:GQ:DP        1|0:100:26      1|0:100:25      1|1:100:39
+14     31782389        rs17098620      G       A       .       PASS    AA=G;DP=127     GT:GQ:DP        1|0:100:26      1|0:100:25      1|1:100:77
+7      86457788        rs1635033       T       C       .       PASS    AA=C;DP=136     GT:GQ:DP        1|0:100:26      1|0:100:25      1|1:100:86
+5      22072008        rs4701563       A       G       .       PASS    AA=G;DP=100     GT:GQ:DP        1|0:100:26      1|0:100:26      1|1:100:47
+11     24101926        rs7930560       G       A       .       PASS    AA=G;DP=109     GT:GQ:DP        1|0:100:26      1|0:100:26      1|1:100:54
+8      106267572       rs58896696      T       C       .       PASS    AA=T;DP=110     GT:GQ:DP        1|0:100:26      1|0:100:26      1|1:100:59
+15     46801631        rs804319        T       C       .       PASS    AA=C;DP=112     GT:GQ:DP        1|0:100:26      1|0:100:26      1|1:100:61
+8      129128605       rs2720658       T       A       .       PASS    AA=A;DP=140     GT:GQ:DP        1|0:100:26      1|0:100:26      1|1:100:89
+12     63008045        rs59075784      C       T       .       PASS    AA=C;DP=102     GT:GQ:DP        1|0:100:26      1|0:100:27      1|1:100:40
+19     42692388        rs6508733       A       T       .       PASS    AA=T;DP=104     GT:GQ:DP        1|0:100:26      1|0:100:27      1|1:100:53
+7      130492777       rs1079030       C       T       .       PASS    AA=C;DP=109     GT:GQ:DP        1|0:100:26      1|0:100:27      1|1:100:54
+10     62842174        rs12257343      A       T       .       PASS    AA=A;DP=108     GT:GQ:DP        1|0:100:26      1|0:100:27      1|1:100:55
+10     14858876        rs12256790      A       G       .       PASS    AA=A;DP=127     GT:GQ:DP        1|0:100:26      1|0:100:27      1|1:100:74
+15     56962520        rs11858989      T       C       .       PASS    AA=T;DP=132     GT:GQ:DP        1|0:100:26      1|0:100:27      1|1:100:81
+6      114972785       rs786137        T       C       .       PASS    AA=T;DP=92      GT:GQ:DP        1|0:100:26      1|0:100:27      1|1:58:39
+2      210968145       rs1019394       G       A       .       PASS    AA=G;DP=104     GT:GQ:DP        1|0:100:26      1|0:100:28      1|1:100:35
+6      47905042        rs12175803      C       T       .       PASS    AA=T;DP=104     GT:GQ:DP        1|0:100:26      1|0:100:28      1|1:100:49
+2      19714858        rs6709681       T       C       .       PASS    AA=T;DP=116     GT:GQ:DP        1|0:100:26      1|0:100:28      1|1:100:61
+8      115873705       rs13278865      T       G       .       PASS    AA=G;DP=122     GT:GQ:DP        1|0:100:26      1|0:100:28      1|1:100:70
+12     31935095        rs1624010       C       T       .       PASS    AA=T;DP=109     GT:GQ:DP        1|0:100:26      1|0:100:29      1|1:100:54
+19     34011898        rs4804854       A       G       .       PASS    AA=G;DP=130     GT:GQ:DP        1|0:100:26      1|0:100:29      1|1:100:73
+6      63672605        rs4301283       C       A       .       PASS    AA=C;DP=131     GT:GQ:DP        1|0:100:26      1|0:100:29      1|1:100:75
+6      3718118 rs12206351      A       G       .       PASS    AA=A;DP=114     GT:GQ:DP        1|0:100:26      1|0:100:30      1|1:100:55
+2      43611369        rs2172169       C       G       .       PASS    AA=G;DP=114     GT:GQ:DP        1|0:100:26      1|0:100:30      1|1:100:59
+4      44728544        rs12510889      C       T       .       PASS    AA=C;DP=121     GT:GQ:DP        1|0:100:26      1|0:100:30      1|1:100:67
+4      183525338       rs6833652       C       G       .       PASS    AA=G;DP=110     GT:GQ:DP        1|0:100:26      1|0:100:31      1|1:100:54
+4      118688103       rs2635343       A       T       .       PASS    AA=A;DP=113     GT:GQ:DP        1|0:100:26      1|0:100:31      1|1:100:56
+10     3552875 rs520706        A       C       .       PASS    AA=A;DP=136     GT:GQ:DP        1|0:100:26      1|0:100:31      1|1:100:79
+5      92780658        rs7715034       G       A       .       PASS    AA=A;DP=119     GT:GQ:DP        1|0:100:26      1|0:100:33      1|1:87:56
+18     50980424        .       C       T       .       PASS    AA=C;DP=119     GT:GQ:DP        1|0:100:26      1|0:100:34      1|1:100:60
+2      37582129        rs13387905      A       G       .       PASS    AA=A;DP=161     GT:GQ:DP        1|0:100:26      1|0:100:35      1|1:100:83
+16     77829050        rs9924583       A       C       .       PASS    AA=C;DP=147     GT:GQ:DP        1|0:100:26      1|0:100:37      1|1:100:82
+3      107009791       rs9849559       T       G       .       PASS    AA=T;DP=81      GT:GQ:DP        1|0:100:26      1|0:12:7        1|1:83:47
+7      21862832        rs55846125      G       A       .       PASS    AA=G;DP=105     GT:GQ:DP        1|0:100:26      1|0:13:19       1|1:100:59
+9      115830332       rs10759679      C       T       .       PASS    AA=C;DP=122     GT:GQ:DP        1|0:100:26      1|0:36:19       1|1:100:77
+1      2389474 rs2477695       A       G       .       PASS    AA=G;DP=85;HM3  GT:GQ:DP        1|0:100:26      1|0:37:11       1|1:88:38
+4      177084595       rs13353769      G       A       .       PASS    AA=A;DP=80      GT:GQ:DP        1|0:100:26      1|0:46:17       1|1:46:26
+3      34955189        rs4306813       C       T       .       PASS    AA=C;DP=82      GT:GQ:DP        1|0:100:26      1|0:60:17       1|1:76:40
+7      96857400        rs62496423      C       T       .       PASS    AA=T;DP=99      GT:GQ:DP        1|0:100:26      1|0:64:20       1|1:100:42
+11     92820850        rs12294190      T       C       .       PASS    AA=T;DP=103     GT:GQ:DP        1|0:100:26      1|0:66:21       1|1:100:58
+12     30227294        rs4930906       T       C       .       PASS    AA=T;DP=131     GT:GQ:DP        1|0:100:26      1|0:67:22       1|1:100:79
+20     59609117        rs2207542       G       T       .       PASS    AA=G;DP=122     GT:GQ:DP        1|0:100:26      1|0:71:18       1|1:100:78
+6      36834976        rs236441        G       A       .       PASS    AA=A;DP=137     GT:GQ:DP        1|0:100:26      1|0:71:26       1|1:100:85
+10     2091694 rs10903660      G       T       .       PASS    AA=G;DP=116     GT:GQ:DP        1|0:100:26      1|0:73:19       1|1:100:75
+15     62887207        rs4777601       G       T       .       PASS    AA=G;DP=82      GT:GQ:DP        1|0:100:26      1|0:78:10       1|1:82:38
+7      150966193       rs4726075       A       G       .       PASS    AA=G;DP=109     GT:GQ:DP        1|0:100:26      1|0:78:16       1|1:100:69
+3      101845747       rs6441384       G       C       .       PASS    AA=C;DP=103     GT:GQ:DP        1|0:100:26      1|0:81:19       1|1:100:59
+3      118598534       rs9840811       C       T       .       PASS    AA=T;DP=126     GT:GQ:DP        1|0:100:26      1|0:83:19       1|1:100:79
+1      163447444       rs6426903       C       T       .       PASS    AA=C;DP=135;HM2;HM3     GT:GQ:DP        1|0:100:26      1|0:84:18       1|1:100:51
+7      23975510        rs10261882      A       G       .       PASS    AA=A;DP=104     GT:GQ:DP        1|0:100:26      1|0:89:15       1|1:100:64
+7      12377914        rs62448569      T       A       .       PASS    AA=A;DP=111     GT:GQ:DP        1|0:100:26      1|0:89:21       1|1:100:66
+6      30070775        rs9260994       C       G       .       PASS    AA=.;DP=106     GT:GQ:DP        1|0:100:26      1|0:91:14       1|1:100:66
+3      41935609        rs1716977       A       C       .       PASS    AA=C;DP=87      GT:GQ:DP        1|0:100:26      1|0:92:14       1|1:100:50
+17     75839650        rs8078855       G       T       .       PASS    AA=t;DP=106     GT:GQ:DP        1|0:100:26      1|0:96:14       1|1:100:67
+11     80945080        rs2213096       A       C       .       PASS    AA=A;DP=107     GT:GQ:DP        1|0:100:26      1|0:98:16       1|1:100:68
+8      53263363        rs6989604       A       G       .       PASS    AA=A;DP=115     GT:GQ:DP        1|0:100:26      1|0:98:18       1|1:100:72
+15     57906934        rs7183185       T       C       .       PASS    AA=T;DP=138     GT:GQ:DP        1|0:100:26      1|1:100:36      1|1:100:69
+4      144847402       rs924234        C       A       .       PASS    AA=A;DP=95      GT:GQ:DP        1|0:100:26      1|1:18:7        1|1:100:62
+2      109428011       rs13408371      G       A       .       PASS    AA=A;DP=114     GT:GQ:DP        1|0:100:26      1|1:22:18       1|1:84:28
+8      97653152        rs2575710       C       T       .       PASS    AA=C;DP=99      GT:GQ:DP        1|0:100:26      1|1:29:21       1|1:100:54
+4      184974695       rs1560981       A       G       .       PASS    AA=G;DP=83      GT:GQ:DP        1|0:100:26      1|1:30:10       1|1:100:35
+2      41882979        rs12618553      C       G       .       PASS    AA=C;DP=90      GT:GQ:DP        1|0:100:26      1|1:30:14       1|1:100:49
+12     123782833       rs1726364       A       C       .       PASS    AA=A;DP=127     GT:GQ:DP        1|0:100:26      1|1:30:21       1|1:100:82
+2      1339536 rs11211663      G       A       .       PASS    AA=G;DP=71      GT:GQ:DP        1|0:100:26      1|1:33:11       1|1:75:25
+11     118377791       rs4558175       G       A       .       PASS    AA=A;DP=94      GT:GQ:DP        1|0:100:26      1|1:34:17       1|1:100:52
+2      53571608        rs6720273       T       C       .       PASS    AA=C;DP=102     GT:GQ:DP        1|0:100:26      1|1:34:23       1|1:100:43
+17     37246748        rs9896980       G       A       .       PASS    AA=G;DP=111     GT:GQ:DP        1|0:100:26      1|1:36:23       1|1:100:62
+12     81268318        rs4495950       A       G       .       PASS    AA=A;DP=89      GT:GQ:DP        1|0:100:26      1|1:37:15       1|1:100:36
+5      63685866        rs6449720       C       A       .       PASS    AA=A;DP=89      GT:GQ:DP        1|0:100:26      1|1:38:18       1|1:96:44
+19     56258043        rs1404318       A       G       .       PASS    AA=A;DP=120     GT:GQ:DP        1|0:100:26      1|1:38:19       1|1:100:76
+4      143841867       rs12504610      C       G       .       PASS    AA=G;DP=95      GT:GQ:DP        1|0:100:26      1|1:39:13       1|1:100:57
+6      67225681        rs1513495       C       T       .       PASS    AA=T;DP=83      GT:GQ:DP        1|0:100:26      1|1:39:13       1|1:99:33
+17     169399  rs11654845      T       C       .       PASS    AA=t;DP=94      GT:GQ:DP        1|0:100:26      1|1:39:14       1|1:100:43
+1      238671488       rs9725726       C       T       .       PASS    AA=T;DP=97;HM2  GT:GQ:DP        1|0:100:26      1|1:41:25       1|1:100:35
+2      224383112       rs17243807      G       A       .       PASS    AA=G;DP=101     GT:GQ:DP        1|0:100:26      1|1:42:14       1|1:100:62
+3      150074633       rs6766148       A       G       .       PASS    AA=G;DP=87      GT:GQ:DP        1|0:100:26      1|1:42:15       1|1:100:34
+14     104982684       rs6576102       G       A       .       PASS    AA=A;DP=127     GT:GQ:DP        1|0:100:26      1|1:45:15       1|1:100:80
+12     98183261        rs11109786      C       T       .       PASS    AA=T;DP=82      GT:GQ:DP        1|0:100:26      1|1:45:15       1|1:96:32
+10     88393678        .       G       T       .       PASS    AA=G;DP=120     GT:GQ:DP        1|0:100:26      1|1:47:27       1|1:100:68
+20     40646403        rs6072800       T       G       .       PASS    AA=T;DP=103     GT:GQ:DP        1|0:100:26      1|1:48:16       1|1:100:61
+1      178762251       rs1934411       C       T       .       PASS    AA=C;DP=99;HM2  GT:GQ:DP        1|0:100:26      1|1:51:17       1|1:100:45
+2      83977444        rs61198418      G       A       .       PASS    AA=A;DP=105     GT:GQ:DP        1|0:100:26      1|1:51:17       1|1:100:67
+6      161997609       rs6908057       G       A       .       PASS    AA=A;DP=129     GT:GQ:DP        1|0:100:26      1|1:51:17       1|1:100:86
+10     128932552       rs4750758       T       C       .       PASS    AA=T;DP=94      GT:GQ:DP        1|0:100:26      1|1:51:18       1|1:100:51
+5      115602259       rs6594960       T       C       .       PASS    AA=C;DP=99      GT:GQ:DP        1|0:100:26      1|1:51:18       1|1:100:55
+9      86155796        rs36102941      A       G       .       PASS    AA=a;DP=103     GT:GQ:DP        1|0:100:26      1|1:51:19       1|1:100:57
+3      9610034 rs2648574       T       C       .       PASS    AA=C;DP=105     GT:GQ:DP        1|0:100:26      1|1:53:23       1|1:100:54
+13     53607729        rs2784567       T       A       .       PASS    AA=A;DP=96      GT:GQ:DP        1|0:100:26      1|1:54:18       1|1:100:50
+9      92391641        rs689637        T       C       .       PASS    AA=C;DP=123     GT:GQ:DP        1|0:100:26      1|1:54:20       1|1:100:77
+9      129892215       rs7874542       A       G       .       PASS    AA=G;DP=98      GT:GQ:DP        1|0:100:26      1|1:57:19       1|1:100:51
+6      73541036        rs11759755      T       G       .       PASS    AA=T;DP=100     GT:GQ:DP        1|0:100:26      1|1:57:19       1|1:100:52
+9      127057661       rs7043132       A       G       .       PASS    AA=A;DP=110     GT:GQ:DP        1|0:100:26      1|1:57:19       1|1:100:66
+4      154877789       rs2124645       T       C       .       PASS    AA=T;DP=105     GT:GQ:DP        1|0:100:26      1|1:57:26       1|1:92:53
+5      9825836 rs3094344       G       A       .       PASS    AA=A;DP=110     GT:GQ:DP        1|0:100:26      1|1:60:21       1|1:100:63
+14     42950036        rs2415808       A       G       .       PASS    AA=G;DP=96      GT:GQ:DP        1|0:100:26      1|1:60:22       1|1:100:49
+16     27345472        rs179762        G       A       .       PASS    AA=g;DP=155     GT:GQ:DP        1|0:100:26      1|1:63:21       1|1:100:50
+9      74236881        rs4526421       C       G       .       PASS    AA=C;DP=100     GT:GQ:DP        1|0:100:26      1|1:63:21       1|1:100:54
+4      145126120       rs4835476       T       G       .       PASS    AA=T;DP=116     GT:GQ:DP        1|0:100:26      1|1:63:21       1|1:100:63
+5      78879479        rs4704563       A       G       .       PASS    AA=G;DP=112     GT:GQ:DP        1|0:100:26      1|1:63:21       1|1:100:67
+2      198820163       rs7589892       T       C       .       PASS    AA=C;DP=122     GT:GQ:DP        1|0:100:26      1|1:63:21       1|1:100:73
+1      228162961       rs11122468      T       A       .       PASS    AA=A;DP=85      GT:GQ:DP        1|0:100:26      1|1:63:21       1|1:43:38
+2      82225779        rs4852214       G       T       .       PASS    AA=T;DP=92      GT:GQ:DP        1|0:100:26      1|1:65:23       1|1:82:41
+4      77975407        rs9790410       G       A       .       PASS    AA=A;DP=112     GT:GQ:DP        1|0:100:26      1|1:65:33       1|1:100:53
+10     65677112        rs6479975       T       G       .       PASS    AA=G;DP=112     GT:GQ:DP        1|0:100:26      1|1:66:22       1|1:100:61
+7      93242388        rs2724120       A       G       .       PASS    AA=A;DP=111     GT:GQ:DP        1|0:100:26      1|1:66:22       1|1:100:64
+9      18262756        rs7861434       G       A       .       PASS    AA=A;DP=118     GT:GQ:DP        1|0:100:26      1|1:66:22       1|1:100:70
+11     99926638        rs1939308       T       G       .       PASS    AA=G;DP=128     GT:GQ:DP        1|0:100:26      1|1:66:22       1|1:100:79
+2      125142514       .       A       G       .       PASS    AA=A;DP=113     GT:GQ:DP        1|0:100:26      1|1:66:27       1|1:100:58
+11     23663016        rs10834167      A       G       .       PASS    AA=.;DP=100     GT:GQ:DP        1|0:100:26      1|1:66:30       1|1:75:32
+12     30284432        rs10506062      C       T       .       PASS    AA=C;DP=119     GT:GQ:DP        1|0:100:26      1|1:68:29       1|1:100:65
+9      14300018        rs34797073      G       A       .       PASS    AA=G;DP=106     GT:GQ:DP        1|0:100:26      1|1:69:23       1|1:100:55
+2      15756683        rs4668459       G       A       .       PASS    AA=G;DP=120     GT:GQ:DP        1|0:100:26      1|1:69:23       1|1:100:68
+2      205747847       rs7585316       T       C       .       PASS    AA=C;DP=91      GT:GQ:DP        1|0:100:26      1|1:69:24       1|1:56:30
+2      19298137        rs13403560      C       T       .       PASS    AA=C;DP=111     GT:GQ:DP        1|0:100:26      1|1:72:24       1|1:100:59
+7      126509574       rs2283094       T       C       .       PASS    AA=C;DP=115     GT:GQ:DP        1|0:100:26      1|1:72:26       1|1:100:57
+11     77886282        rs7123060       A       G       .       PASS    AA=a;DP=130     GT:GQ:DP        1|0:100:26      1|1:75:25       1|1:100:75
+3      78886724        rs416025        C       T       .       PASS    AA=C;DP=152     GT:GQ:DP        1|0:100:26      1|1:75:25       1|1:100:85
+13     54067163        rs9527231       C       T       .       PASS    AA=C;DP=111     GT:GQ:DP        1|0:100:26      1|1:75:26       1|1:100:60
+2      101421418       rs6708221       T       A       .       PASS    AA=A;DP=102     GT:GQ:DP        1|0:100:26      1|1:78:27       1|1:100:39
+11     9681045 rs2572942       A       G       .       PASS    AA=G;DP=94      GT:GQ:DP        1|0:100:26      1|1:78:27       1|1:81:29
+18     43120072        rs892575        T       C       .       PASS    AA=C;DP=104     GT:GQ:DP        1|0:100:26      1|1:81:28       1|1:100:51
+4      127417050       rs7681673       T       A       .       PASS    AA=A;DP=109     GT:GQ:DP        1|0:100:26      1|1:84:28       1|1:100:53
+5      6300074 rs2398219       G       T       .       PASS    AA=T;DP=132     GT:GQ:DP        1|0:100:26      1|1:84:29       1|1:100:78
+4      183487756       rs6552553       T       C       .       PASS    AA=T;DP=137     GT:GQ:DP        1|0:100:26      1|1:84:30       1|1:100:38
+12     93474128        rs7955502       C       A       .       PASS    AA=C;DP=130     GT:GQ:DP        1|0:100:26      1|1:87:29       1|1:100:72
+8      140601495       rs11778126      C       T       .       PASS    AA=c;DP=127     GT:GQ:DP        1|0:100:26      1|1:87:30       1|1:100:71
+2      114629655       rs10189293      A       G       .       PASS    AA=A;DP=145     GT:GQ:DP        1|0:100:26      1|1:87:30       1|1:100:85
+11     69316688        rs10752569      T       C       .       PASS    AA=C;DP=100     GT:GQ:DP        1|0:100:26      1|1:8:11        1|1:100:51
+3      170227424       rs1024829       T       C       .       PASS    AA=C;DP=132     GT:GQ:DP        1|0:100:26      1|1:93:31       1|1:100:76
+5      11558211        .       T       C       .       PASS    AA=T;DP=111     GT:GQ:DP        1|0:100:27      0|0:100:33      1|0:100:41
+16     9736869 .       G       A       .       PASS    AA=G;DP=152     GT:GQ:DP        1|0:100:27      0|0:100:34      1|0:100:46
+11     103647115       rs7103181       A       G       .       PASS    AA=A;DP=110     GT:GQ:DP        1|0:100:27      0|0:100:34      1|0:100:47
+17     46687865        rs11079950      A       G       .       PASS    AA=A;DP=152     GT:GQ:DP        1|0:100:27      0|0:100:34      1|0:100:93
+6      169872046       rs11961560      T       C       .       PASS    AA=T;DP=128     GT:GQ:DP        1|0:100:27      0|0:100:35      1|0:100:66
+4      37931891        .       A       C       .       PASS    AA=A;DP=128     GT:GQ:DP        1|0:100:27      0|0:100:35      1|0:100:67
+5      156191489       rs10057251      T       A       .       PASS    AA=T;DP=139     GT:GQ:DP        1|0:100:27      0|0:100:35      1|0:100:71
+13     75995813        rs7325086       A       G       .       PASS    AA=A;DP=139     GT:GQ:DP        1|0:100:27      0|0:100:37      1|0:100:76
+4      149567304       rs10026568      C       T       .       PASS    AA=T;DP=161     GT:GQ:DP        1|0:100:27      0|0:100:42      1|0:100:53
+14     83817189        .       G       T       .       PASS    AA=N;DP=110     GT:GQ:DP        1|0:100:27      0|0:18:16       1|0:100:70
+21     21223706        .       C       A       .       PASS    AA=C;DP=102     GT:GQ:DP        1|0:100:27      0|0:18:19       1|0:100:44
+3      80382847        .       C       T       .       PASS    AA=C;DP=148     GT:GQ:DP        1|0:100:27      0|0:18:57       1|0:100:66
+20     59719887        .       T       C       .       PASS    AA=T;DP=100     GT:GQ:DP        1|0:100:27      0|0:22:16       1|0:100:48
+5      55597623        .       C       T       .       PASS    AA=C;DP=104     GT:GQ:DP        1|0:100:27      0|0:25:16       1|0:100:62
+14     103737196       .       C       T       .       PASS    AA=C;DP=76      GT:GQ:DP        1|0:100:27      0|0:26:9        1|0:100:34
+2      57297071        rs9789713       A       G       .       PASS    AA=G;DP=82      GT:GQ:DP        1|0:100:27      0|0:29:11       1|0:100:44
+15     52412447        rs34238399      A       G       .       PASS    AA=G;DP=91      GT:GQ:DP        1|0:100:27      0|0:29:15       1|0:100:50
+4      99223591        rs34273190      C       T       .       PASS    AA=C;DP=81      GT:GQ:DP        1|0:100:27      0|0:32:10       1|0:100:31
+4      619610  .       C       T       .       PASS    AA=C;DP=121     GT:GQ:DP        1|0:100:27      0|0:32:10       1|0:100:86
+14     64983327        rs28452027      G       C       .       PASS    AA=G;DP=94      GT:GQ:DP        1|0:100:27      0|0:32:16       1|0:100:53
+5      45878569        rs60875306      A       C       .       PASS    AA=A;DP=116     GT:GQ:DP        1|0:100:27      0|0:32:21       1|0:100:65
+12     49624654        rs13378041      T       C       .       PASS    AA=C;DP=114     GT:GQ:DP        1|0:100:27      0|0:32:21       1|0:100:66
+18     60550092        rs9950847       A       C       .       PASS    AA=C;DP=137     GT:GQ:DP        1|0:100:27      0|0:32:21       1|0:100:76
+4      141771100       .       G       T       .       PASS    AA=G;DP=122     GT:GQ:DP        1|0:100:27      0|0:34:20       1|0:100:77
+1      153052886       rs11804928      C       T       .       PASS    AA=C;DP=133;HM2;HM3     GT:GQ:DP        1|0:100:27      0|0:35:13       1|0:100:46
+5      132743744       rs34881334      C       T       .       PASS    AA=C;DP=112     GT:GQ:DP        1|0:100:27      0|0:35:13       1|0:100:66
+1      163023869       .       A       G       .       PASS    AA=a;DP=102     GT:GQ:DP        1|0:100:27      0|0:35:17       1|0:100:56
+2      180500287       .       G       T       .       PASS    AA=G;DP=107     GT:GQ:DP        1|0:100:27      0|0:35:21       1|0:100:60
+17     132759  .       G       A       .       PASS    AA=G;DP=132     GT:GQ:DP        1|0:100:27      0|0:35:22       1|0:100:83
+1      90553931        .       C       A       .       PASS    AA=C;DP=106     GT:GQ:DP        1|0:100:27      0|0:35:24       1|0:100:56
+10     22147691        rs57367681      T       C       .       PASS    AA=T;DP=107     GT:GQ:DP        1|0:100:27      0|0:37:17       1|0:100:65
+8      134378316       rs10108354      G       A       .       PASS    AA=G;DP=111     GT:GQ:DP        1|0:100:27      0|0:38:13       1|0:100:70
+3      82131134        rs60957164      A       T       .       PASS    AA=A;DP=99      GT:GQ:DP        1|0:100:27      0|0:38:17       1|0:100:55
+18     56680293        .       A       G       .       PASS    AA=A;DP=100     GT:GQ:DP        1|0:100:27      0|0:38:18       1|0:100:52
+9      23416193        rs10511725      A       C       .       PASS    AA=A;DP=113     GT:GQ:DP        1|0:100:27      0|0:38:18       1|0:100:65
+13     102920571       rs9519045       C       A       .       PASS    AA=C;DP=93      GT:GQ:DP        1|0:100:27      0|0:38:23       1|0:100:47
+21     35204691        .       T       C       .       PASS    AA=T;DP=124     GT:GQ:DP        1|0:100:27      0|0:38:23       1|0:100:73
+13     96338221        .       C       A       .       PASS    AA=C;DP=114     GT:GQ:DP        1|0:100:27      0|0:38:26       1|0:100:61
+9      128988659       rs7044315       A       G       .       PASS    AA=A;DP=107     GT:GQ:DP        1|0:100:27      0|0:39:15       1|0:100:53
+4      134751662       rs7676809       G       A       .       PASS    AA=G;DP=82      GT:GQ:DP        1|0:100:27      0|0:39:17       1|0:100:38
+10     135223013       rs11101826      A       G       .       PASS    AA=a;DP=115     GT:GQ:DP        1|0:100:27      0|0:39:20       1|0:100:68
+3      193862667       rs1995472       G       A       .       PASS    AA=G;DP=132     GT:GQ:DP        1|0:100:27      0|0:39:24       1|0:100:83
+19     53221753        .       T       A       .       PASS    AA=t;DP=119     GT:GQ:DP        1|0:100:27      0|0:40:28       1|0:100:67
+6      81639356        rs12175173      C       T       .       PASS    AA=T;DP=114     GT:GQ:DP        1|0:100:27      0|0:41:13       1|0:100:75
+2      240357618       .       C       T       .       PASS    AA=c;DP=107     GT:GQ:DP        1|0:100:27      0|0:41:14       1|0:100:68
+3      22432745        rs13319677      C       G       .       PASS    AA=C;DP=105     GT:GQ:DP        1|0:100:27      0|0:41:17       1|0:100:59
+10     44851922        rs12782937      T       C       .       PASS    AA=T;DP=94      GT:GQ:DP        1|0:100:27      0|0:41:19       1|0:100:47
+3      180304576       .       G       T       .       PASS    AA=G;DP=110     GT:GQ:DP        1|0:100:27      0|0:41:19       1|0:100:63
+3      45156005        rs36114248      C       A       .       PASS    AA=C;DP=118     GT:GQ:DP        1|0:100:27      0|0:41:23       1|0:100:63
+15     23374540        rs2906018       G       T       .       PASS    AA=g;DP=128     GT:GQ:DP        1|0:100:27      0|0:42:27       1|0:100:73
+12     69309150        rs10506599      A       G       .       PASS    AA=A;DP=98      GT:GQ:DP        1|0:100:27      0|0:43:20       1|0:100:51
+19     48964706        .       A       T       .       PASS    AA=A;DP=132     GT:GQ:DP        1|0:100:27      0|0:43:25       1|0:100:79
+13     38579048        rs4943629       C       G       .       PASS    AA=C;DP=110     GT:GQ:DP        1|0:100:27      0|0:44:14       1|0:100:58
+5      41558108        rs60707515      G       A       .       PASS    AA=A;DP=104     GT:GQ:DP        1|0:100:27      0|0:44:14       1|0:100:60
+13     82134894        rs9593697       T       C       .       PASS    AA=T;DP=112     GT:GQ:DP        1|0:100:27      0|0:44:14       1|0:100:71
+10     134839810       .       G       C       .       PASS    AA=N;DP=122     GT:GQ:DP        1|0:100:27      0|0:44:14       1|0:100:81
+12     29425287        .       A       G       .       PASS    AA=A;DP=126     GT:GQ:DP        1|0:100:27      0|0:44:14       1|0:100:83
+5      34546307        rs60413468      T       G       .       PASS    AA=T;DP=128     GT:GQ:DP        1|0:100:27      0|0:44:14       1|0:100:87
+7      126245226       .       C       G       .       PASS    AA=C;DP=89      GT:GQ:DP        1|0:100:27      0|0:44:15       1|0:100:46
+6      4696017 .       C       T       .       PASS    AA=C;DP=69      GT:GQ:DP        1|0:100:27      0|0:44:15       1|0:82:15
+15     44940665        .       T       C       .       PASS    AA=T;DP=96      GT:GQ:DP        1|0:100:27      0|0:44:16       1|0:100:50
+11     17284475        rs12282915      A       G       .       PASS    AA=G;DP=111     GT:GQ:DP        1|0:100:27      0|0:44:16       1|0:100:66
+15     37533499        rs58001045      G       A       .       PASS    AA=G;DP=105     GT:GQ:DP        1|0:100:27      0|0:46:25       1|0:100:51
+20     37958589        rs6124193       T       G       .       PASS    AA=T;DP=74      GT:GQ:DP        1|0:100:27      0|0:47:15       1|0:100:24
+15     50728827        rs17651917      A       G       .       PASS    AA=A;DP=96      GT:GQ:DP        1|0:100:27      0|0:47:15       1|0:100:52
+6      90118637        rs59817524      A       G       .       PASS    AA=A;DP=97      GT:GQ:DP        1|0:100:27      0|0:47:15       1|0:100:54
+15     63848224        rs59441846      A       C       .       PASS    AA=A;DP=98      GT:GQ:DP        1|0:100:27      0|0:47:15       1|0:100:56
+11     40213091        rs10768588      C       T       .       PASS    AA=T;DP=98      GT:GQ:DP        1|0:100:27      0|0:47:15       1|0:100:57
+12     37900663        .       A       G       .       PASS    AA=A;DP=97      GT:GQ:DP        1|0:100:27      0|0:47:15       1|0:100:57
+13     84709103        .       C       T       .       PASS    AA=c;DP=123     GT:GQ:DP        1|0:100:27      0|0:47:15       1|0:100:65
+10     6304171 .       C       T       .       PASS    AA=T;DP=100     GT:GQ:DP        1|0:100:27      0|0:47:16       1|0:100:48
+2      72198384        rs57048965      G       C       .       PASS    AA=C;DP=148     GT:GQ:DP        1|0:100:27      0|0:47:16       1|0:100:55
+4      99706867        rs28635613      T       C       .       PASS    AA=T;DP=101     GT:GQ:DP        1|0:100:27      0|0:47:16       1|0:100:58
+12     26236465        rs57028352      G       A       .       PASS    AA=G;DP=102     GT:GQ:DP        1|0:100:27      0|0:47:16       1|0:100:62
+15     69224609        rs16955200      A       G       .       PASS    AA=A;DP=116     GT:GQ:DP        1|0:100:27      0|0:47:16       1|0:100:74
+4      176765079       .       T       A       .       PASS    AA=A;DP=91      GT:GQ:DP        1|0:100:27      0|0:48:19       1|0:100:30
+15     59685093        rs16944395      T       C       .       PASS    AA=T;DP=127     GT:GQ:DP        1|0:100:27      0|0:49:22       1|0:100:76
+7      113164106       rs56764538      A       G       .       PASS    AA=A;DP=119     GT:GQ:DP        1|0:100:27      0|0:49:23       1|0:100:70
+6      79913349        rs10484946      T       C       .       PASS    AA=T;DP=102     GT:GQ:DP        1|0:100:27      0|0:50:16       1|0:100:58
+12     45868298        rs712104        T       C       .       PASS    AA=T;DP=109     GT:GQ:DP        1|0:100:27      0|0:50:16       1|0:100:66
+1      54984655        .       C       T       .       PASS    AA=C;DP=125     GT:GQ:DP        1|0:100:27      0|0:50:16       1|0:100:82
+3      11945239        rs11128583      G       A       .       PASS    AA=A;DP=96      GT:GQ:DP        1|0:100:27      0|0:50:17       1|0:100:52
+4      162419294       rs35161634      T       C       .       PASS    AA=C;DP=118     GT:GQ:DP        1|0:100:27      0|0:50:17       1|0:100:76
+14     104854672       .       C       T       .       PASS    AA=C;DP=131     GT:GQ:DP        1|0:100:27      0|0:50:17       1|0:100:89
+19     16772674        .       G       T       .       PASS    AA=G;DP=124     GT:GQ:DP        1|0:100:27      0|0:51:27       1|0:100:69
+6      73499201        .       C       T       .       PASS    AA=C;DP=122     GT:GQ:DP        1|0:100:27      0|0:52:24       1|0:100:72
+2      218629105       .       A       G       .       PASS    AA=.;DP=125     GT:GQ:DP        1|0:100:27      0|0:52:24       1|0:100:76
+3      64558798        rs6782076       A       T       .       PASS    AA=T;DP=132     GT:GQ:DP        1|0:100:27      0|0:52:28       1|0:100:68
+6      46696380        rs2223754       C       T       .       PASS    AA=T;DP=128     GT:GQ:DP        1|0:100:27      0|0:52:28       1|0:100:71
+4      6269032 .       C       T       .       PASS    AA=c;DP=85      GT:GQ:DP        1|0:100:27      0|0:53:17       1|0:100:40
+13     19342079        rs9579726       T       C       .       PASS    AA=T;DP=137     GT:GQ:DP        1|0:100:27      0|0:53:17       1|0:100:45
+2      242120710       rs10208002      C       T       .       PASS    AA=C;DP=105     GT:GQ:DP        1|0:100:27      0|0:53:17       1|0:100:51
+15     39668216        rs4924561       C       T       .       PASS    AA=T;DP=105     GT:GQ:DP        1|0:100:27      0|0:53:17       1|0:100:54
+18     39286754        .       C       T       .       PASS    AA=C;DP=97      GT:GQ:DP        1|0:100:27      0|0:53:17       1|0:100:54
+2      51691006        .       C       T       .       PASS    AA=C;DP=101     GT:GQ:DP        1|0:100:27      0|0:53:17       1|0:100:54
+5      14047187        rs2582697       A       T       .       PASS    AA=A;DP=100     GT:GQ:DP        1|0:100:27      0|0:53:17       1|0:100:57
+11     97499881        .       G       A       .       PASS    AA=G;DP=110     GT:GQ:DP        1|0:100:27      0|0:53:17       1|0:100:63
+18     63896949        rs1518027       A       T       .       PASS    AA=T;DP=110     GT:GQ:DP        1|0:100:27      0|0:53:17       1|0:100:68
+2      19781820        rs2347858       G       A       .       PASS    AA=G;DP=116     GT:GQ:DP        1|0:100:27      0|0:53:17       1|0:100:72
+2      100287137       rs11683121      C       T       .       PASS    AA=C;DP=117     GT:GQ:DP        1|0:100:27      0|0:53:18       1|0:100:35
+6      104795595       rs60298237      G       T       .       PASS    AA=G;DP=91      GT:GQ:DP        1|0:100:27      0|0:53:18       1|0:100:45
+4      13883055        rs16889958      A       T       .       PASS    AA=A;DP=100     GT:GQ:DP        1|0:100:27      0|0:53:18       1|0:100:53
+1      150444076       .       G       A       .       PASS    AA=G;DP=100     GT:GQ:DP        1|0:100:27      0|0:53:18       1|0:100:55
+4      59377824        .       C       T       .       PASS    AA=C;DP=109     GT:GQ:DP        1|0:100:27      0|0:53:18       1|0:100:63
+12     95031873        rs4762132       C       G       .       PASS    AA=N;DP=128     GT:GQ:DP        1|0:100:27      0|0:53:18       1|0:100:85
+18     23737858        .       C       T       .       PASS    AA=G;DP=133     GT:GQ:DP        1|0:100:27      0|0:53:22       1|0:100:79
+12     117427630       .       A       T       .       PASS    AA=A;DP=117     GT:GQ:DP        1|0:100:27      0|0:55:23       1|0:100:66
+18     38182699        rs452105        G       A       .       PASS    AA=G;DP=127     GT:GQ:DP        1|0:100:27      0|0:55:26       1|0:100:75
+8      63660720        rs2882924       A       G       .       PASS    AA=A;DP=134     GT:GQ:DP        1|0:100:27      0|0:55:29       1|0:100:80
+11     107262561       .       C       A       .       PASS    AA=c;DP=94      GT:GQ:DP        1|0:100:27      0|0:56:18       1|0:100:47
+15     51469523        .       G       A       .       PASS    AA=G;DP=98      GT:GQ:DP        1|0:100:27      0|0:56:18       1|0:100:54
+4      36300675        rs10213441      C       T       .       PASS    AA=C;DP=102     GT:GQ:DP        1|0:100:27      0|0:56:18       1|0:100:61
+6      7966531 rs9392189       A       G       .       PASS    AA=A;DP=111     GT:GQ:DP        1|0:100:27      0|0:56:18       1|0:100:68
+19     19878390        rs1303719       C       T       .       PASS    AA=.;DP=116     GT:GQ:DP        1|0:100:27      0|0:56:18       1|0:100:73
+19     9093773 rs4395187       C       T       .       PASS    AA=T;DP=122     GT:GQ:DP        1|0:100:27      0|0:56:18       1|0:100:79
+7      52760658        .       A       G       .       PASS    AA=A;DP=88      GT:GQ:DP        1|0:100:27      0|0:56:18       1|0:68:36
+15     52157238        rs7172769       A       C       .       PASS    AA=C;DP=93      GT:GQ:DP        1|0:100:27      0|0:56:19       1|0:100:35
+9      132825005       .       C       T       .       PASS    AA=.;DP=119     GT:GQ:DP        1|0:100:27      0|0:56:19       1|0:100:69
+15     54745295        rs16977033      T       C       .       PASS    AA=T;DP=119     GT:GQ:DP        1|0:100:27      0|0:56:19       1|0:100:71
+18     13758917        .       C       T       .       PASS    AA=C;DP=105     GT:GQ:DP        1|0:100:27      0|0:56:21       1|0:100:58
+2      187844436       rs6737660       C       T       .       PASS    AA=T;DP=123     GT:GQ:DP        1|0:100:27      0|0:58:25       1|0:100:33
+5      102182555       .       G       A       .       PASS    AA=g;DP=129     GT:GQ:DP        1|0:100:27      0|0:59:19       1|0:100:41
+5      30549987        .       G       A       .       PASS    AA=G;DP=104     GT:GQ:DP        1|0:100:27      0|0:59:19       1|0:100:48
+22     42770584        rs2016796       T       G       .       PASS    AA=T;DP=95      GT:GQ:DP        1|0:100:27      0|0:59:19       1|0:100:49
+10     132735750       .       A       C       .       PASS    AA=C;DP=102     GT:GQ:DP        1|0:100:27      0|0:59:19       1|0:100:56
+8      139658795       .       G       A       .       PASS    AA=g;DP=113     GT:GQ:DP        1|0:100:27      0|0:59:19       1|0:100:69
+13     90325195        rs7984080       G       A       .       PASS    AA=G;DP=122     GT:GQ:DP        1|0:100:27      0|0:59:19       1|0:100:71
+3      43966393        rs9867840       C       T       .       PASS    AA=C;DP=119     GT:GQ:DP        1|0:100:27      0|0:59:19       1|0:100:73
+10     109220631       rs11193497      G       A       .       PASS    AA=G;DP=109     GT:GQ:DP        1|0:100:27      0|0:59:20       1|0:100:63
+3      42844492        .       G       A       .       PASS    AA=G;DP=113     GT:GQ:DP        1|0:100:27      0|0:59:20       1|0:100:66
+2      199636460       .       T       C       .       PASS    AA=T;DP=115     GT:GQ:DP        1|0:100:27      0|0:59:20       1|0:100:68
+21     41833391        .       G       C       .       PASS    AA=G;DP=118     GT:GQ:DP        1|0:100:27      0|0:59:20       1|0:100:71
+8      72605800        rs1895674       T       G       .       PASS    AA=T;DP=124     GT:GQ:DP        1|0:100:27      0|0:59:20       1|0:100:73
+14     68786625        .       C       T       .       PASS    AA=C;DP=136     GT:GQ:DP        1|0:100:27      0|0:59:20       1|0:100:89
+1      182214874       rs2986557       G       T       .       PASS    AA=G;DP=124     GT:GQ:DP        1|0:100:27      0|0:60:27       1|0:100:66
+3      116478161       .       A       C       .       PASS    AA=A;DP=141     GT:GQ:DP        1|0:100:27      0|0:60:29       1|0:100:46
+6      106873606       rs1769978       A       C       .       PASS    AA=A;DP=118     GT:GQ:DP        1|0:100:27      0|0:61:27       1|0:100:65
+12     132189561       .       A       G       .       PASS    AA=A;DP=134     GT:GQ:DP        1|0:100:27      0|0:62:20       1|0:100:45
+18     10303826        rs7241864       T       C       .       PASS    AA=C;DP=98      GT:GQ:DP        1|0:100:27      0|0:62:20       1|0:100:50
+6      132975505       rs59148659      A       G       .       PASS    AA=G;DP=98      GT:GQ:DP        1|0:100:27      0|0:62:20       1|0:100:52
+8      96713993        rs34669503      T       A       .       PASS    AA=A;DP=108     GT:GQ:DP        1|0:100:27      0|0:62:20       1|0:100:60
+12     69248128        rs7300723       A       T       .       PASS    AA=T;DP=112     GT:GQ:DP        1|0:100:27      0|0:62:20       1|0:100:67
+2      53848324        rs17045203      C       T       .       PASS    AA=C;DP=121     GT:GQ:DP        1|0:100:27      0|0:62:20       1|0:100:72
+1      103295450       rs6664844       T       C       .       PASS    AA=T;DP=120     GT:GQ:DP        1|0:100:27      0|0:62:20       1|0:100:73
+5      59038906        .       C       G       .       PASS    AA=C;DP=124     GT:GQ:DP        1|0:100:27      0|0:62:20       1|0:100:76
+21     16076656        rs58116084      C       G       .       PASS    AA=C;DP=123     GT:GQ:DP        1|0:100:27      0|0:62:20       1|0:100:77
+3      198704472       rs9810416       T       C       .       PASS    AA=C;DP=115     GT:GQ:DP        1|0:100:27      0|0:62:21       1|0:100:66
+6      106118191       rs17215314      C       T       .       PASS    AA=G;DP=116     GT:GQ:DP        1|0:100:27      0|0:62:21       1|0:100:69
+16     46484390        rs6500376       C       T       .       PASS    AA=T;DP=123     GT:GQ:DP        1|0:100:27      0|0:62:21       1|0:100:78
+3      8766844 rs59746083      T       G       .       PASS    AA=T;DP=126     GT:GQ:DP        1|0:100:27      0|0:62:21       1|0:100:79
+12     26924853        rs61922524      C       T       .       PASS    AA=T;DP=106     GT:GQ:DP        1|0:100:27      0|0:62:22       1|0:100:57
+4      85701468        rs2868912       C       T       .       PASS    AA=C;DP=129     GT:GQ:DP        1|0:100:27      0|0:63:26       1|0:100:77
+1      40545876        rs2075560       C       T       .       PASS    AA=c;DP=118;HM2;HM3     GT:GQ:DP        1|0:100:27      0|0:64:26       1|0:100:62
+X      1641017 rs5948969       G       T       .       PASS    AA=N;DP=99      GT:GQ:DP        1|0:100:27      0|0:64:28       1|0:100:43
+2      187786003       .       A       T       .       PASS    AA=A;DP=102     GT:GQ:DP        1|0:100:27      0|0:65:21       1|0:100:54
+16     22756227        .       G       A       .       PASS    AA=G;DP=104     GT:GQ:DP        1|0:100:27      0|0:65:21       1|0:100:58
+1      83879747        rs12127196      A       G       .       PASS    AA=G;DP=110     GT:GQ:DP        1|0:100:27      0|0:65:21       1|0:100:61
+7      86476539        .       G       A       .       PASS    AA=G;DP=116     GT:GQ:DP        1|0:100:27      0|0:65:21       1|0:100:69
+15     24418502        rs2873027       C       T       .       PASS    AA=T;DP=119     GT:GQ:DP        1|0:100:27      0|0:65:21       1|0:100:70
+2      198655762       rs16827521      G       A       .       PASS    AA=G;DP=118     GT:GQ:DP        1|0:100:27      0|0:65:21       1|0:100:70
+5      78462248        .       A       G       .       PASS    AA=A;DP=122     GT:GQ:DP        1|0:100:27      0|0:65:21       1|0:100:75
+14     100667405       rs10145105      C       G       .       PASS    AA=C;DP=129     GT:GQ:DP        1|0:100:27      0|0:65:21       1|0:100:81
+9      979581  rs10816185      C       T       .       PASS    AA=C;DP=128     GT:GQ:DP        1|0:100:27      0|0:65:21       1|0:100:81
+5      43062057        rs7735821       A       T       .       PASS    AA=A;DP=98      GT:GQ:DP        1|0:100:27      0|0:65:22       1|0:100:49
+2      14203278        rs10165102      G       A       .       PASS    AA=G;DP=106     GT:GQ:DP        1|0:100:27      0|0:65:22       1|0:100:56
+6      149747328       rs11155647      T       C       .       PASS    AA=T;DP=111     GT:GQ:DP        1|0:100:27      0|0:65:22       1|0:100:62
+8      143091605       .       A       G       .       PASS    AA=a;DP=138     GT:GQ:DP        1|0:100:27      0|0:65:22       1|0:100:88
+3      193524399       .       T       C       .       PASS    AA=C;DP=106     GT:GQ:DP        1|0:100:27      0|0:65:23       1|0:100:57
+1      211984853       .       G       A       .       PASS    AA=G;DP=127     GT:GQ:DP        1|0:100:27      0|0:65:23       1|0:100:76
+6      107312133       rs3117423       G       A       .       PASS    AA=G;DP=124     GT:GQ:DP        1|0:100:27      0|0:65:29       1|0:100:67
+9      117435159       .       T       C       .       PASS    AA=T;DP=147     GT:GQ:DP        1|0:100:27      0|0:66:33       1|0:100:89
+1      150864100       .       G       A       .       PASS    AA=G;DP=123     GT:GQ:DP        1|0:100:27      0|0:67:26       1|0:100:74
+2      109235920       .       T       C       .       PASS    AA=T;DP=82      GT:GQ:DP        1|0:100:27      0|0:68:22       1|0:100:22
+7      110558797       rs10243966      A       T       .       PASS    AA=A;DP=90      GT:GQ:DP        1|0:100:27      0|0:68:22       1|0:100:44
+18     66126238        rs4891398       T       C       .       PASS    AA=C;DP=99      GT:GQ:DP        1|0:100:27      0|0:68:22       1|0:100:48
+11     90697994        rs10830714      G       A       .       PASS    AA=G;DP=106     GT:GQ:DP        1|0:100:27      0|0:68:22       1|0:100:57
+6      40772223        rs62396177      G       A       .       PASS    AA=G;DP=105     GT:GQ:DP        1|0:100:27      0|0:68:22       1|0:100:57
+5      153493596       rs17625484      G       T       .       PASS    AA=G;DP=107     GT:GQ:DP        1|0:100:27      0|0:68:22       1|0:100:59
+2      62572149        .       C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        1|0:100:27      0|0:68:22       1|0:100:65
+5      54023706        rs11960427      G       A       .       PASS    AA=A;DP=124     GT:GQ:DP        1|0:100:27      0|0:68:22       1|0:100:75
+10     122681011       .       A       G       .       PASS    AA=A;DP=133     GT:GQ:DP        1|0:100:27      0|0:68:22       1|0:100:85
+7      113279647       .       T       C       .       PASS    AA=T;DP=126     GT:GQ:DP        1|0:100:27      0|0:68:23       1|0:100:77
+3      58380613        rs11130637      C       G       .       PASS    AA=C;DP=131     GT:GQ:DP        1|0:100:27      0|0:68:23       1|0:100:81
+5      97365714        .       G       C       .       PASS    AA=C;DP=141     GT:GQ:DP        1|0:100:27      0|0:68:23       1|0:100:89
+3      33947547        .       A       G       .       PASS    AA=A;DP=140     GT:GQ:DP        1|0:100:27      0|0:68:23       1|0:100:90
+16     79013698        rs4410097       C       A       .       PASS    AA=C;DP=105     GT:GQ:DP        1|0:100:27      0|0:68:24       1|0:100:54
+13     37686193        .       C       T       .       PASS    AA=C;DP=132     GT:GQ:DP        1|0:100:27      0|0:68:24       1|0:100:81
+3      67182018        .       C       G       .       PASS    AA=G;DP=119     GT:GQ:DP        1|0:100:27      0|0:68:26       1|0:100:65
+16     54565524        rs7202099       G       A       .       PASS    AA=A;DP=144     GT:GQ:DP        1|0:100:27      0|0:68:28       1|0:100:72
+5      115945212       rs10075410      A       C       .       PASS    AA=C;DP=168     GT:GQ:DP        1|0:100:27      0|0:68:29       1|0:100:52
+5      165788622       rs720945        T       A       .       PASS    AA=T;DP=124     GT:GQ:DP        1|0:100:27      0|0:69:27       1|0:100:71
+7      108028236       rs1029706       T       G       .       PASS    AA=G;DP=110     GT:GQ:DP        1|0:100:27      0|0:70:25       1|0:100:52
+9      105154403       rs303587        T       G       .       PASS    AA=G;DP=126     GT:GQ:DP        1|0:100:27      0|0:71:23       1|0:100:71
+6      53088262        rs6941744       A       G       .       PASS    AA=A;DP=122     GT:GQ:DP        1|0:100:27      0|0:71:23       1|0:100:72
+13     93621940        rs1333251       G       A       .       PASS    AA=A;DP=123     GT:GQ:DP        1|0:100:27      0|0:71:23       1|0:100:75
+10     101999758       rs12256097      T       C       .       PASS    AA=T;DP=129     GT:GQ:DP        1|0:100:27      0|0:71:23       1|0:100:79
+20     14673587        rs6034026       T       G       .       PASS    AA=T;DP=138     GT:GQ:DP        1|0:100:27      0|0:71:23       1|0:100:89
+1      68345253        rs61044510      G       A       .       PASS    AA=G;DP=119     GT:GQ:DP        1|0:100:27      0|0:71:24       1|0:100:42
+3      87701666        .       G       A       .       PASS    AA=A;DP=107     GT:GQ:DP        1|0:100:27      0|0:71:24       1|0:100:56
+5      107770752       .       C       T       .       PASS    AA=C;DP=107     GT:GQ:DP        1|0:100:27      0|0:71:24       1|0:100:57
+4      77348141        rs7654339       T       G       .       PASS    AA=T;DP=116     GT:GQ:DP        1|0:100:27      0|0:71:24       1|0:100:62
+11     115435279       .       T       A       .       PASS    AA=T;DP=113     GT:GQ:DP        1|0:100:27      0|0:71:24       1|0:100:63
+14     32333602        rs12589681      T       C       .       PASS    AA=A;DP=116     GT:GQ:DP        1|0:100:27      0|0:71:24       1|0:100:64
+19     49260463        .       A       G       .       PASS    AA=A;DP=116     GT:GQ:DP        1|0:100:27      0|0:71:24       1|0:100:65
+15     49813031        rs11070865      T       C       .       PASS    AA=T;DP=133     GT:GQ:DP        1|0:100:27      0|0:71:24       1|0:100:83
+1      157848822       rs2794503       T       C       .       PASS    AA=T;DP=107;HM2;HM3     GT:GQ:DP        1|0:100:27      0|0:71:25       1|0:100:55
+11     37368813        rs12286181      C       T       .       PASS    AA=C;DP=123     GT:GQ:DP        1|0:100:27      0|0:71:25       1|0:100:70
+6      5455160 rs60847453      C       T       .       PASS    AA=C;DP=124     GT:GQ:DP        1|0:100:27      0|0:71:26       1|0:100:72
+11     12391558        rs11022347      G       T       .       PASS    AA=T;DP=125     GT:GQ:DP        1|0:100:27      0|0:72:35       1|0:100:63
+4      147486494       .       G       T       .       PASS    AA=G;DP=110     GT:GQ:DP        1|0:100:27      0|0:74:24       1|0:100:39
+8      98917065        rs2513968       T       C       .       PASS    AA=C;DP=106     GT:GQ:DP        1|0:100:27      0|0:74:24       1|0:100:43
+7      43881919        .       C       A       .       PASS    AA=C;DP=151     GT:GQ:DP        1|0:100:27      0|0:74:24       1|0:100:47
+15     51718279        .       G       A       .       PASS    AA=G;DP=111     GT:GQ:DP        1|0:100:27      0|0:74:24       1|0:100:48
+5      80205150        rs6151931       A       C       .       PASS    AA=A;DP=106     GT:GQ:DP        1|0:100:27      0|0:74:24       1|0:100:55
+11     82056379        rs55700508      T       C       .       PASS    AA=T;DP=109     GT:GQ:DP        1|0:100:27      0|0:74:24       1|0:100:57
+10     132549787       rs11017527      T       C       .       PASS    AA=T;DP=111     GT:GQ:DP        1|0:100:27      0|0:74:24       1|0:100:60
+4      166569140       .       T       C       .       PASS    AA=T;DP=117     GT:GQ:DP        1|0:100:27      0|0:74:24       1|0:100:67
+6      156258636       rs17086790      A       C       .       PASS    AA=A;DP=117     GT:GQ:DP        1|0:100:27      0|0:74:24       1|0:100:68
+9      121346188       rs58709712      G       A       .       PASS    AA=G;DP=122     GT:GQ:DP        1|0:100:27      0|0:74:24       1|0:100:70
+18     69258560        .       T       C       .       PASS    AA=t;DP=131     GT:GQ:DP        1|0:100:27      0|0:74:24       1|0:100:81
+6      130589292       .       G       A       .       PASS    AA=G;DP=139     GT:GQ:DP        1|0:100:27      0|0:74:25       1|0:100:42
+7      153272407       rs57275824      G       A       .       PASS    AA=g;DP=115     GT:GQ:DP        1|0:100:27      0|0:74:25       1|0:100:53
+6      123490950       rs9482336       A       T       .       PASS    AA=A;DP=108     GT:GQ:DP        1|0:100:27      0|0:74:25       1|0:100:56
+1      213026078       rs6660852       A       G       .       PASS    AA=a;DP=114;HM2 GT:GQ:DP        1|0:100:27      0|0:74:26       1|0:100:61
+6      81774229        rs62424136      C       T       .       PASS    AA=C;DP=127     GT:GQ:DP        1|0:100:27      0|0:74:27       1|0:100:75
+5      61891709        .       A       C       .       PASS    AA=A;DP=140     GT:GQ:DP        1|0:100:27      0|0:74:35       1|0:100:79
+7      141405675       .       G       C       .       PASS    AA=.;DP=113     GT:GQ:DP        1|0:100:27      0|0:77:25       1|0:100:49
+4      149448891       .       G       A       .       PASS    AA=G;DP=113     GT:GQ:DP        1|0:100:27      0|0:77:25       1|0:100:59
+12     24779405        .       T       G       .       PASS    AA=T;DP=112     GT:GQ:DP        1|0:100:27      0|0:77:25       1|0:100:61
+20     7157611 rs1546957       A       G       .       PASS    AA=A;DP=117     GT:GQ:DP        1|0:100:27      0|0:77:25       1|0:100:63
+5      156094267       rs11954233      T       C       .       PASS    AA=T;DP=117     GT:GQ:DP        1|0:100:27      0|0:77:25       1|0:100:66
+1      157896008       rs1446974       T       C       .       PASS    AA=T;DP=118;HM2 GT:GQ:DP        1|0:100:27      0|0:77:25       1|0:100:67
+18     69900339        rs12962744      G       A       .       PASS    AA=G;DP=119     GT:GQ:DP        1|0:100:27      0|0:77:25       1|0:100:67
+16     55576137        .       C       T       .       PASS    AA=c;DP=131     GT:GQ:DP        1|0:100:27      0|0:77:25       1|0:100:75
+3      15791330        rs7633542       C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        1|0:100:27      0|0:77:26       1|0:100:62
+19     41897767        rs58880289      C       G       .       PASS    AA=C;DP=118     GT:GQ:DP        1|0:100:27      0|0:77:26       1|0:100:65
+8      122782511       rs10098096      A       G       .       PASS    AA=A;DP=130     GT:GQ:DP        1|0:100:27      0|0:77:26       1|0:100:78
+9      10427034        rs650768        T       G       .       PASS    AA=G;DP=124     GT:GQ:DP        1|0:100:27      0|0:77:27       1|0:100:71
+3      67553438        rs9838227       A       G       .       PASS    AA=A;DP=114     GT:GQ:DP        1|0:100:27      0|0:77:28       1|0:100:60
+6      99665147        .       C       G       .       PASS    AA=C;DP=133     GT:GQ:DP        1|0:100:27      0|0:77:28       1|0:100:81
+18     55213340        rs8092290       A       G       .       PASS    AA=A;DP=157     GT:GQ:DP        1|0:100:27      0|0:78:30       1|0:100:93
+7      27304008        rs6947332       G       T       .       PASS    AA=T;DP=116     GT:GQ:DP        1|0:100:27      0|0:7:17        1|0:100:68
+8      131149531       .       A       G       .       PASS    AA=A;DP=116     GT:GQ:DP        1|0:100:27      0|0:80:26       1|0:100:63
+10     119163731       rs60219705      T       A       .       PASS    AA=A;DP=122     GT:GQ:DP        1|0:100:27      0|0:80:26       1|0:100:70
+3      28620462        .       A       G       .       PASS    AA=A;DP=128     GT:GQ:DP        1|0:100:27      0|0:80:26       1|0:100:75
+13     61575316        rs167433        C       T       .       PASS    AA=C;DP=130     GT:GQ:DP        1|0:100:27      0|0:80:26       1|0:100:76
+6      26064463        .       A       G       .       PASS    AA=a;DP=128     GT:GQ:DP        1|0:100:27      0|0:80:26       1|0:100:78
+13     108996160       rs1410425       C       T       .       PASS    AA=C;DP=144     GT:GQ:DP        1|0:100:27      0|0:80:26       1|0:100:81
+12     43083522        rs57957351      G       A       .       PASS    AA=G;DP=142     GT:GQ:DP        1|0:100:27      0|0:80:26       1|0:100:87
+6      131855971       rs2246281       G       T       .       PASS    AA=G;DP=148     GT:GQ:DP        1|0:100:27      0|0:80:26       1|0:100:95
+1      206616469       rs696981        C       T       .       PASS    AA=C;DP=124;HM2;HM3     GT:GQ:DP        1|0:100:27      0|0:80:27       1|0:100:32
+3      68923236        rs931433        G       A       .       PASS    AA=G;DP=126     GT:GQ:DP        1|0:100:27      0|0:80:27       1|0:100:70
+3      89328082        rs9810366       T       C       .       PASS    AA=T;DP=123     GT:GQ:DP        1|0:100:27      0|0:80:27       1|0:100:70
+20     185756  rs57773004      C       T       .       PASS    AA=C;DP=112     GT:GQ:DP        1|0:100:27      0|0:80:28       1|0:100:57
+5      5126768 rs270638        T       C       .       PASS    AA=T;DP=116     GT:GQ:DP        1|0:100:27      0|0:80:28       1|0:100:57
+9      83349263        rs7018942       G       A       .       PASS    AA=G;DP=112     GT:GQ:DP        1|0:100:27      0|0:83:27       1|0:100:57
+13     47595843        rs7338999       C       G       .       PASS    AA=C;DP=121     GT:GQ:DP        1|0:100:27      0|0:83:27       1|0:100:67
+4      161905358       .       G       C       .       PASS    AA=C;DP=122     GT:GQ:DP        1|0:100:27      0|0:83:27       1|0:100:70
+2      1942758 rs35754984      C       T       .       PASS    AA=T;DP=127     GT:GQ:DP        1|0:100:27      0|0:83:27       1|0:100:71
+4      186897116       rs13140205      A       G       .       PASS    AA=A;DP=122     GT:GQ:DP        1|0:100:27      0|0:83:29       1|0:100:67
+21     14809150        rs2822713       A       G       .       PASS    AA=G;DP=123     GT:GQ:DP        1|0:100:27      0|0:83:30       1|0:100:64
+5      80042314        rs3776968       C       T       .       PASS    AA=A;DP=128     GT:GQ:DP        1|0:100:27      0|0:83:31       1|0:100:70
+5      43002474        rs7725727       G       A       .       PASS    AA=G;DP=138     GT:GQ:DP        1|0:100:27      0|0:86:28       1|0:100:33
+20     7487523 .       T       G       .       PASS    AA=T;DP=96      GT:GQ:DP        1|0:100:27      0|0:86:28       1|0:100:42
+3      158139447       rs4680317       A       G       .       PASS    AA=A;DP=122     GT:GQ:DP        1|0:100:27      0|0:86:28       1|0:100:67
+11     77934646        rs10899551      C       A       .       PASS    AA=C;DP=122     GT:GQ:DP        1|0:100:27      0|0:86:28       1|0:100:69
+14     89529008        rs35651940      G       A       .       PASS    AA=G;DP=132     GT:GQ:DP        1|0:100:27      0|0:86:28       1|0:100:74
+1      74970087        .       T       C       .       PASS    AA=T;DP=135     GT:GQ:DP        1|0:100:27      0|0:86:28       1|0:100:83
+10     110189730       rs11194097      T       C       .       PASS    AA=T;DP=126     GT:GQ:DP        1|0:100:27      0|0:86:29       1|0:100:70
+3      129152640       rs9830149       G       A       .       PASS    AA=G;DP=134     GT:GQ:DP        1|0:100:27      0|0:86:29       1|0:100:78
+1      238546101       rs4332348       A       G       .       PASS    AA=G;DP=141;HM2;HM3     GT:GQ:DP        1|0:100:27      0|0:86:29       1|0:100:84
+1      66842576        rs7535237       C       T       .       PASS    AA=C;DP=154;HM2;HM3     GT:GQ:DP        1|0:100:27      0|0:86:30       1|0:100:50
+16     78710931        rs16952442      A       C       .       PASS    AA=A;DP=135     GT:GQ:DP        1|0:100:27      0|0:86:30       1|0:100:80
+5      173525070       rs10069469      C       T       .       PASS    AA=C;DP=150     GT:GQ:DP        1|0:100:27      0|0:86:30       1|0:100:93
+3      8568999 rs9818452       G       A       .       PASS    AA=A;DP=138     GT:GQ:DP        1|0:100:27      0|0:86:31       1|0:100:81
+15     90912079        .       C       T       .       PASS    AA=C;DP=148     GT:GQ:DP        1|0:100:27      0|0:87:33       1|0:100:82
+5      68484934        .       G       A       .       PASS    AA=A;DP=116     GT:GQ:DP        1|0:100:27      0|0:88:35       1|0:100:54
+3      76821850        rs2875406       T       C       .       PASS    AA=T;DP=113     GT:GQ:DP        1|0:100:27      0|0:89:29       1|0:100:61
+14     21731476        rs34638737      G       A       .       PASS    AA=g;DP=123     GT:GQ:DP        1|0:100:27      0|0:89:29       1|0:100:65
+19     56938522        rs8105268       A       G       .       PASS    AA=A;DP=133     GT:GQ:DP        1|0:100:27      0|0:89:29       1|0:100:78
+10     63104258        .       G       A       .       PASS    AA=G;DP=114     GT:GQ:DP        1|0:100:27      0|0:89:30       1|0:100:54
+6      91829169        rs59899755      T       C       .       PASS    AA=T;DP=125     GT:GQ:DP        1|0:100:27      0|0:89:30       1|0:100:65
+3      141816035       rs6439936       A       T       .       PASS    AA=T;DP=124     GT:GQ:DP        1|0:100:27      0|0:89:31       1|0:100:65
+2      13313875        rs389710        A       G       .       PASS    AA=G;DP=138     GT:GQ:DP        1|0:100:27      0|0:92:30       1|0:100:45
+1      158576011       rs12081673      A       C       .       PASS    AA=A;DP=117;HM2 GT:GQ:DP        1|0:100:27      0|0:92:30       1|0:100:61
+5      124506231       rs11744843      T       G       .       PASS    AA=T;DP=119     GT:GQ:DP        1|0:100:27      0|0:92:30       1|0:100:64
+11     101958402       .       G       A       .       PASS    AA=G;DP=133     GT:GQ:DP        1|0:100:27      0|0:92:30       1|0:100:77
+17     12185010        rs2721853       C       T       .       PASS    AA=C;DP=151     GT:GQ:DP        1|0:100:27      0|0:92:30       1|0:100:96
+13     78038687        rs56879477      A       G       .       PASS    AA=A;DP=142     GT:GQ:DP        1|0:100:27      0|0:92:31       1|0:100:47
+2      4983080 .       A       G       .       PASS    AA=a;DP=126     GT:GQ:DP        1|0:100:27      0|0:92:31       1|0:100:68
+8      95524543        rs11778733      A       G       .       PASS    AA=A;DP=142     GT:GQ:DP        1|0:100:27      0|0:92:31       1|0:100:84
+7      28258985        .       A       G       .       PASS    AA=A;DP=129     GT:GQ:DP        1|0:100:27      0|0:92:32       1|0:100:70
+13     93689511        rs9524382       G       A       .       PASS    AA=G;DP=134     GT:GQ:DP        1|0:100:27      0|0:92:32       1|0:100:79
+6      78109610        .       A       G       .       PASS    AA=A;DP=115     GT:GQ:DP        1|0:100:27      0|0:92:33       1|0:100:54
+11     86017583        rs58204746      A       G       .       PASS    AA=A;DP=161     GT:GQ:DP        1|0:100:27      0|0:95:31       1|0:100:45
+3      2643519 rs61028875      C       T       .       PASS    AA=C;DP=118     GT:GQ:DP        1|0:100:27      0|0:95:31       1|0:100:60
+12     4868055 rs6489583       G       A       .       PASS    AA=G;DP=123     GT:GQ:DP        1|0:100:27      0|0:95:33       1|0:100:52
+8      36578612        rs7814403       T       C       .       PASS    AA=T;DP=148     GT:GQ:DP        1|0:100:27      0|0:98:32       1|0:100:48
+13     87082749        .       G       T       .       PASS    AA=G;DP=120     GT:GQ:DP        1|0:100:27      0|0:98:32       1|0:100:60
+13     89657092        rs4773558       A       G       .       PASS    AA=A;DP=131     GT:GQ:DP        1|0:100:27      0|0:98:32       1|0:100:75
+20     44474656        rs6017817       G       A       .       PASS    AA=G;DP=95      GT:GQ:DP        1|0:100:27      1|0:100:12      1|1:100:61
+10     65005321        rs7090758       T       C       .       PASS    AA=C;DP=94      GT:GQ:DP        1|0:100:27      1|0:100:14      1|1:100:56
+17     16114996        .       G       C       .       PASS    AA=G;DP=117     GT:GQ:DP        1|0:100:27      1|0:100:15      1|1:100:75
+12     56872819        rs10877081      T       G       .       PASS    AA=G;DP=86      GT:GQ:DP        1|0:100:27      1|0:100:16      1|1:100:44
+4      146587647       .       G       C       .       PASS    AA=G;DP=100     GT:GQ:DP        1|0:100:27      1|0:100:16      1|1:100:59
+16     80989195        rs1019959       C       A       .       PASS    AA=A;DP=104     GT:GQ:DP        1|0:100:27      1|0:100:16      1|1:100:61
+10     22688086        rs7893132       C       G       .       PASS    AA=C;DP=122     GT:GQ:DP        1|0:100:27      1|0:100:16      1|1:100:79
+8      127491126       rs28538614      C       A       .       PASS    AA=A;DP=103     GT:GQ:DP        1|0:100:27      1|0:100:17      1|1:100:56
+1      236412448       rs59757649      C       T       .       PASS    AA=C;DP=104     GT:GQ:DP        1|0:100:27      1|0:100:17      1|1:100:63
+18     6299832 rs2729740       A       G       .       PASS    AA=G;DP=90      GT:GQ:DP        1|0:100:27      1|0:100:18      1|1:100:45
+10     54340647        rs4309063       T       C       .       PASS    AA=T;DP=99      GT:GQ:DP        1|0:100:27      1|0:100:18      1|1:100:55
+6      33159661        rs9277411       C       T       .       PASS    AA=c;DP=83      GT:GQ:DP        1|0:100:27      1|0:100:18      1|1:81:28
+16     78125935        rs861957        C       T       .       PASS    AA=T;DP=96      GT:GQ:DP        1|0:100:27      1|0:100:19      1|1:100:50
+6      149360754       rs9498189       A       G       .       PASS    AA=A;DP=94      GT:GQ:DP        1|0:100:27      1|0:100:19      1|1:100:50
+6      42193203        rs4579355       C       T       .       PASS    AA=c;DP=103     GT:GQ:DP        1|0:100:27      1|0:100:19      1|1:100:59
+2      10759781        rs7559857       T       C       .       PASS    AA=T;DP=106     GT:GQ:DP        1|0:100:27      1|0:100:19      1|1:100:62
+15     48218379        rs12915287      C       T       .       PASS    AA=T;DP=114     GT:GQ:DP        1|0:100:27      1|0:100:19      1|1:100:71
+7      28857782        rs763809        T       C       .       PASS    AA=C;DP=101     GT:GQ:DP        1|0:100:27      1|0:100:20      1|1:100:55
+9      83922377        rs1028847       A       T       .       PASS    AA=T;DP=107     GT:GQ:DP        1|0:100:27      1|0:100:20      1|1:100:64
+21     44844428        rs377263        C       T       .       PASS    AA=C;DP=109     GT:GQ:DP        1|0:100:27      1|0:100:21      1|1:100:60
+18     37389863        rs2612329       C       G       .       PASS    AA=C;DP=113     GT:GQ:DP        1|0:100:27      1|0:100:21      1|1:100:64
+5      87531260        rs358288        G       A       .       PASS    AA=A;DP=105     GT:GQ:DP        1|0:100:27      1|0:100:22      1|1:100:57
+21     17118166        rs2205301       C       G       .       PASS    AA=G;DP=95      GT:GQ:DP        1|0:100:27      1|0:100:22      1|1:80:47
+2      107011934       rs17459175      A       G       .       PASS    AA=A;DP=104     GT:GQ:DP        1|0:100:27      1|0:100:23      1|1:100:55
+11     41765178        .       T       C       .       PASS    AA=T;DP=112     GT:GQ:DP        1|0:100:27      1|0:100:23      1|1:100:60
+9      14239418        rs59804771      C       T       .       PASS    AA=T;DP=108     GT:GQ:DP        1|0:100:27      1|0:100:23      1|1:100:60
+5      120165107       rs6874581       C       G       .       PASS    AA=c;DP=112     GT:GQ:DP        1|0:100:27      1|0:100:23      1|1:100:61
+12     2335873 rs11062198      A       G       .       PASS    AA=A;DP=114     GT:GQ:DP        1|0:100:27      1|0:100:24      1|1:100:52
+13     95453628        rs7338224       C       T       .       PASS    AA=T;DP=115     GT:GQ:DP        1|0:100:27      1|0:100:24      1|1:100:52
+4      84394183        .       A       C       .       PASS    AA=A;DP=109     GT:GQ:DP        1|0:100:27      1|0:100:24      1|1:100:57
+1      228011781       rs484776        G       C       .       PASS    AA=G;DP=116;HM2 GT:GQ:DP        1|0:100:27      1|0:100:24      1|1:100:64
+2      41578344        rs59413984      G       C       .       PASS    AA=G;DP=116     GT:GQ:DP        1|0:100:27      1|0:100:24      1|1:100:65
+9      81108189        rs273438        A       G       .       PASS    AA=a;DP=121     GT:GQ:DP        1|0:100:27      1|0:100:24      1|1:100:67
+11     92870785        rs10466331      A       C       .       PASS    AA=A;DP=124     GT:GQ:DP        1|0:100:27      1|0:100:24      1|1:100:72
+10     113862692       rs7913627       A       G       .       PASS    AA=A;DP=138     GT:GQ:DP        1|0:100:27      1|0:100:24      1|1:100:88
+4      98181837        rs4624660       T       A       .       PASS    AA=T;DP=110     GT:GQ:DP        1|0:100:27      1|0:100:25      1|1:100:59
+3      199010598       rs841672        A       G       .       PASS    AA=A;DP=133     GT:GQ:DP        1|0:100:27      1|0:100:25      1|1:100:77
+12     102308269       rs10778241      C       T       .       PASS    AA=A;DP=114     GT:GQ:DP        1|0:100:27      1|0:100:26      1|1:100:42
+11     86117129        rs2433410       A       T       .       PASS    AA=T;DP=103     GT:GQ:DP        1|0:100:27      1|0:100:26      1|1:100:50
+14     25565566        rs1103563       G       A       .       PASS    AA=A;DP=114     GT:GQ:DP        1|0:100:27      1|0:100:26      1|1:100:63
+4      130314518       rs60862675      G       C       .       PASS    AA=G;DP=117     GT:GQ:DP        1|0:100:27      1|0:100:27      1|1:100:47
+16     6269651 rs8052577       A       T       .       PASS    AA=T;DP=113     GT:GQ:DP        1|0:100:27      1|0:100:27      1|1:100:61
+13     96206211        .       G       A       .       PASS    AA=G;DP=124     GT:GQ:DP        1|0:100:27      1|0:100:27      1|1:100:68
+8      5677097 rs10111249      G       A       .       PASS    AA=A;DP=119     GT:GQ:DP        1|0:100:27      1|0:100:27      1|1:100:69
+14     93230364        rs960888        G       A       .       PASS    AA=g;DP=106     GT:GQ:DP        1|0:100:27      1|0:100:28      1|1:100:44
+11     42394317        rs1355052       C       A       .       PASS    AA=C;DP=143     GT:GQ:DP        1|0:100:27      1|0:100:28      1|1:100:48
+6      100456583       rs4840099       G       C       .       PASS    AA=C;DP=123     GT:GQ:DP        1|0:100:27      1|0:100:28      1|1:100:68
+7      10017397        .       T       C       .       PASS    AA=T;DP=101     GT:GQ:DP        1|0:100:27      1|0:100:28      1|1:79:38
+12     70709537        rs7315855       G       A       .       PASS    AA=A;DP=113     GT:GQ:DP        1|0:100:27      1|0:100:29      1|1:100:58
+5      104184960       rs10223114      T       C       .       PASS    AA=t;DP=114     GT:GQ:DP        1|0:100:27      1|0:100:29      1|1:100:58
+5      107377973       rs169640        G       A       .       PASS    AA=A;DP=117     GT:GQ:DP        1|0:100:27      1|0:100:29      1|1:90:40
+1      194133082       rs1993134       A       G       .       PASS    AA=G;DP=121;HM2 GT:GQ:DP        1|0:100:27      1|0:100:30      1|1:100:51
+1      167871163       rs2223302       T       C       .       PASS    AA=T;DP=120     GT:GQ:DP        1|0:100:27      1|0:100:30      1|1:100:61
+6      96704787        rs10499001      C       T       .       PASS    AA=C;DP=102     GT:GQ:DP        1|0:100:27      1|0:100:30      1|1:99:35
+2      62463457        rs7583609       A       G       .       PASS    AA=A;DP=121     GT:GQ:DP        1|0:100:27      1|0:100:31      1|1:100:61
+3      159407015       rs827143        A       G       .       PASS    AA=A;DP=121     GT:GQ:DP        1|0:100:27      1|0:100:31      1|1:100:61
+3      162157383       rs7635796       G       C       .       PASS    AA=G;DP=116     GT:GQ:DP        1|0:100:27      1|0:100:31      1|1:100:62
+7      52158227        rs2465796       C       T       .       PASS    AA=T;DP=127     GT:GQ:DP        1|0:100:27      1|0:100:32      1|1:100:69
+8      10382402        rs4457299       C       T       .       PASS    AA=T;DP=131     GT:GQ:DP        1|0:100:27      1|0:100:32      1|1:100:73
+13     40126210        rs17061491      T       A       .       PASS    AA=A;DP=135     GT:GQ:DP        1|0:100:27      1|0:100:32      1|1:100:76
+21     18033063        rs9977756       G       T       .       PASS    AA=T;DP=123     GT:GQ:DP        1|0:100:27      1|0:100:32      1|1:87:62
+14     63335157        rs4243627       G       A       .       PASS    AA=G;DP=94      GT:GQ:DP        1|0:100:27      1|0:40:15       1|1:100:52
+11     68826450        .       C       T       .       PASS    AA=T;DP=105     GT:GQ:DP        1|0:100:27      1|0:41:10       1|1:100:54
+8      144443998       rs58487413      C       T       .       PASS    AA=C;DP=94      GT:GQ:DP        1|0:100:27      1|0:46:9        1|1:100:57
+5      1837959 .       G       A       .       PASS    AA=-;DP=94      GT:GQ:DP        1|0:100:27      1|0:52:10       1|1:100:59
+9      136912425       rs7865453       A       C       .       PASS    AA=A;DP=96      GT:GQ:DP        1|0:100:27      1|0:54:10       1|1:100:61
+15     73913229        .       G       A       .       PASS    AA=G;DP=109     GT:GQ:DP        1|0:100:27      1|0:60:22       1|1:100:61
+15     37624748        .       C       G       .       PASS    AA=G;DP=93      GT:GQ:DP        1|0:100:27      1|0:66:13       1|1:100:41
+4      43218056        rs13117635      T       C       .       PASS    AA=T;DP=103     GT:GQ:DP        1|0:100:27      1|0:66:18       1|1:100:58
+1      196480448       rs6692188       G       T       .       PASS    AA=T;DP=107     GT:GQ:DP        1|0:100:27      1|0:67:14       1|1:100:64
+8      681982  rs10090755      C       T       .       PASS    AA=C;DP=122     GT:GQ:DP        1|0:100:27      1|0:68:21       1|1:100:75
+6      159114776       rs753017        T       G       .       PASS    AA=G;DP=86      GT:GQ:DP        1|0:100:27      1|0:68:8        1|1:68:52
+11     67848506        rs545648        T       C       .       PASS    AA=C;DP=79      GT:GQ:DP        1|0:100:27      1|0:71:13       1|1:88:38
+1      168500385       rs2265323       G       A       .       PASS    AA=G;DP=104     GT:GQ:DP        1|0:100:27      1|0:84:25       1|1:100:41
+9      127987620       rs2773374       T       C       .       PASS    AA=N;DP=99      GT:GQ:DP        1|0:100:27      1|0:85:14       1|1:100:56
+2      127805298       rs3755310       A       T       .       PASS    AA=-;DP=76      GT:GQ:DP        1|0:100:27      1|0:85:14       1|1:9:32
+9      125100185       rs7868255       A       C       .       PASS    AA=A;DP=91      GT:GQ:DP        1|0:100:27      1|0:89:26       1|1:100:39
+15     73786174        rs59607161      C       A       .       PASS    AA=C;DP=103     GT:GQ:DP        1|0:100:27      1|0:93:14       1|1:100:61
+20     23132856        rs1538446       A       G       .       PASS    AA=A;DP=130     GT:GQ:DP        1|0:100:27      1|0:94:23       1|1:99:35
+7      75637882        rs6944211       T       G       .       PASS    AA=t;DP=106     GT:GQ:DP        1|0:100:27      1|0:95:13       1|1:100:66
+9      124691185       rs7046980       T       G       .       PASS    AA=T;DP=87      GT:GQ:DP        1|0:100:27      1|0:98:11       1|1:93:47
+2      32665413        rs2710606       A       G       .       PASS    AA=G;DP=118     GT:GQ:DP        1|0:100:27      1|0:98:20       1|1:100:69
+3      27686487        rs9819201       T       C       .       PASS    AA=T;DP=131     GT:GQ:DP        1|0:100:27      1|0:99:19       1|1:100:48
+12     44349814        rs61143080      A       G       .       PASS    AA=A;DP=98      GT:GQ:DP        1|0:100:27      1|0:99:21       1|1:100:39
+7      22412572        rs2528811       T       C       .       PASS    AA=C;DP=126     GT:GQ:DP        1|0:100:27      1|1:100:34      1|1:100:65
+14     43196356        rs58638701      C       T       .       PASS    AA=C;DP=60      GT:GQ:DP        1|0:100:27      1|1:10:10       1|1:20:17
+5      5090199 rs273366        G       T       .       PASS    AA=T;DP=87      GT:GQ:DP        1|0:100:27      1|1:26:15       1|1:77:45
+1      237021853       rs2689190       A       G       .       PASS    AA=G;DP=91;HM2  GT:GQ:DP        1|0:100:27      1|1:27:10       1|1:100:55
+1      17891514        rs12137775      G       T       .       PASS    AA=N;DP=110     GT:GQ:DP        1|0:100:27      1|1:29:19       1|1:100:63
+17     66685960        rs7214621       A       T       .       PASS    AA=A;DP=102     GT:GQ:DP        1|0:100:27      1|1:30:16       1|1:100:59
+16     83929508        rs2875951       A       C       .       PASS    AA=C;DP=88      GT:GQ:DP        1|0:100:27      1|1:31:15       1|1:85:35
+13     112796084       rs7324483       G       C       .       PASS    AA=C;DP=101     GT:GQ:DP        1|0:100:27      1|1:31:16       1|1:100:46
+7      25115495        rs55950809      G       A       .       PASS    AA=G;DP=100     GT:GQ:DP        1|0:100:27      1|1:32:20       1|1:100:42
+21     30203879        rs460243        G       A       .       PASS    AA=g;DP=108     GT:GQ:DP        1|0:100:27      1|1:33:11       1|1:100:69
+10     50294098        rs4838515       C       T       .       PASS    AA=T;DP=104     GT:GQ:DP        1|0:100:27      1|1:36:12       1|1:100:65
+9      133707972       rs3012775       T       C       .       PASS    AA=N;DP=86      GT:GQ:DP        1|0:100:27      1|1:36:12       1|1:96:46
+5      166680588       rs13178466      C       T       .       PASS    AA=T;DP=96      GT:GQ:DP        1|0:100:27      1|1:36:13       1|1:100:55
+14     75443089        rs1474501       T       A       .       PASS    AA=T;DP=103     GT:GQ:DP        1|0:100:27      1|1:36:23       1|1:100:52
+18     47934359        rs7243527       A       C       .       PASS    AA=A;DP=107     GT:GQ:DP        1|0:100:27      1|1:36:23       1|1:100:58
+3      104417388       rs6767726       G       C       .       PASS    AA=C;DP=91      GT:GQ:DP        1|0:100:27      1|1:39:13       1|1:100:50
+10     7499584 rs11255121      A       T       .       PASS    AA=T;DP=84      GT:GQ:DP        1|0:100:27      1|1:39:13       1|1:56:41
+4      15310673        rs8180240       A       T       .       PASS    AA=T;DP=104     GT:GQ:DP        1|0:100:27      1|1:39:14       1|1:100:63
+12     104052398       rs7136344       A       G       .       PASS    AA=A;DP=114     GT:GQ:DP        1|0:100:27      1|1:39:22       1|1:100:66
+5      141518441       rs57393241      C       T       .       PASS    AA=C;DP=95      GT:GQ:DP        1|0:100:27      1|1:42:14       1|1:100:52
+16     12279416        rs12448443      T       C       .       PASS    AA=C;DP=117     GT:GQ:DP        1|0:100:27      1|1:42:14       1|1:100:77
+1      219122839       rs1317189       T       C       .       PASS    AA=C;DP=86      GT:GQ:DP        1|0:100:27      1|1:42:15       1|1:100:45
+4      8205845 rs6823593       C       T       .       PASS    AA=T;DP=109     GT:GQ:DP        1|0:100:27      1|1:42:17       1|1:100:65
+17     44823010        rs2671654       A       G       .       PASS    AA=G;DP=93      GT:GQ:DP        1|0:100:27      1|1:45:15       1|1:100:41
+21     38123682        rs11088409      T       C       .       PASS    AA=T;DP=107     GT:GQ:DP        1|0:100:27      1|1:45:16       1|1:100:51
+11     98677821        rs11219273      G       A       .       PASS    AA=G;DP=98      GT:GQ:DP        1|0:100:27      1|1:45:16       1|1:90:52
+1      215348625       rs6692300       T       G       .       PASS    AA=T;DP=118     GT:GQ:DP        1|0:100:27      1|1:45:17       1|1:100:75
+1      189986078       rs863859        C       T       .       PASS    AA=C;DP=100     GT:GQ:DP        1|0:100:27      1|1:45:18       1|1:100:53
+21     27318530        rs233614        G       T       .       PASS    AA=T;DP=117     GT:GQ:DP        1|0:100:27      1|1:46:21       1|1:100:70
+6      77770578        rs1414186       G       T       .       PASS    AA=T;DP=102     GT:GQ:DP        1|0:100:27      1|1:47:22       1|1:100:52
+16     16817566        rs11646811      C       A       .       PASS    AA=A;DP=121     GT:GQ:DP        1|0:100:27      1|1:48:16       1|1:100:69
+10     17391086        rs374628        T       C       .       PASS    AA=C;DP=105     GT:GQ:DP        1|0:100:27      1|1:48:17       1|1:100:59
+8      25450071        rs9644098       A       G       .       PASS    AA=G;DP=104     GT:GQ:DP        1|0:100:27      1|1:48:17       1|1:83:56
+3      178089290       rs1387167       T       C       .       PASS    AA=T;DP=95      GT:GQ:DP        1|0:100:27      1|1:51:18       1|1:100:51
+6      31126427        rs2523865       A       C       .       PASS    AA=A;DP=109     GT:GQ:DP        1|0:100:27      1|1:54:18       1|1:100:65
+13     75343317        rs9600567       C       T       .       PASS    AA=C;DP=121     GT:GQ:DP        1|0:100:27      1|1:54:18       1|1:100:78
+2      204825297       rs6743312       A       G       .       PASS    AA=G;DP=113     GT:GQ:DP        1|0:100:27      1|1:54:19       1|1:100:69
+22     39483825        rs5758064       T       C       .       PASS    AA=t;DP=90      GT:GQ:DP        1|0:100:27      1|1:57:20       1|1:62:43
+10     87431324        rs7899530       A       T       .       PASS    AA=T;DP=117     GT:GQ:DP        1|0:100:27      1|1:57:21       1|1:100:68
+1      40930960        rs656230        A       G       .       PASS    AA=A;DP=143;HM2;HM3     GT:GQ:DP        1|0:100:27      1|1:57:21       1|1:100:95
+10     10655422        rs7084466       A       C       .       PASS    AA=C;DP=121     GT:GQ:DP        1|0:100:27      1|1:60:20       1|1:100:77
+20     44603212        rs2411  A       G       .       PASS    AA=G;DP=124     GT:GQ:DP        1|0:100:27      1|1:60:20       1|1:100:78
+15     76735808        rs7166158       T       A       .       PASS    AA=t;DP=121     GT:GQ:DP        1|0:100:27      1|1:60:21       1|1:100:76
+12     127845941       rs7135854       G       C       .       PASS    AA=G;DP=113     GT:GQ:DP        1|0:100:27      1|1:61:26       1|1:100:58
+19     57595628        rs12461444      C       T       .       PASS    AA=C;DP=101     GT:GQ:DP        1|0:100:27      1|1:61:26       1|1:75:39
+20     56963437        rs7261748       G       A       .       PASS    AA=G;DP=106     GT:GQ:DP        1|0:100:27      1|1:63:21       1|1:100:58
+14     90497415        rs1286096       C       T       .       PASS    AA=C;DP=119     GT:GQ:DP        1|0:100:27      1|1:63:21       1|1:100:62
+18     52726565        rs4801060       C       T       .       PASS    AA=C;DP=119     GT:GQ:DP        1|0:100:27      1|1:63:22       1|1:100:63
+12     30375001        rs57817530      A       G       .       PASS    AA=G;DP=99      GT:GQ:DP        1|0:100:27      1|1:63:24       1|1:100:48
+4      21336930        rs10028109      C       A       .       PASS    AA=A;DP=127     GT:GQ:DP        1|0:100:27      1|1:64:33       1|1:100:66
+6      63484608        rs2752973       C       T       .       PASS    AA=T;DP=110     GT:GQ:DP        1|0:100:27      1|1:66:22       1|1:100:61
+18     73418427        rs8087033       T       C       .       PASS    AA=C;DP=134     GT:GQ:DP        1|0:100:27      1|1:66:25       1|1:100:84
+8      19043659        rs10102379      G       A       .       PASS    AA=A;DP=97      GT:GQ:DP        1|0:100:27      1|1:69:23       1|1:100:49
+12     30350875        rs1652189       A       G       .       PASS    AA=G;DP=113     GT:GQ:DP        1|0:100:27      1|1:69:23       1|1:100:62
+13     73670918        .       G       A       .       PASS    AA=G;DP=125     GT:GQ:DP        1|0:100:27      1|1:69:23       1|1:100:74
+18     37324730        rs2587617       T       C       .       PASS    AA=C;DP=136     GT:GQ:DP        1|0:100:27      1|1:69:23       1|1:100:83
+8      120353695       rs1346015       G       A       .       PASS    AA=g;DP=98      GT:GQ:DP        1|0:100:27      1|1:69:23       1|1:99:33
+6      23683624        rs149796        G       A       .       PASS    AA=A;DP=106     GT:GQ:DP        1|0:100:27      1|1:69:24       1|1:100:54
+2      224431310       rs7599545       G       T       .       PASS    AA=T;DP=126     GT:GQ:DP        1|0:100:27      1|1:72:24       1|1:100:74
+4      35865285        rs11096800      G       A       .       PASS    AA=A;DP=95      GT:GQ:DP        1|0:100:27      1|1:72:24       1|1:69:34
+4      95505564        rs6419132       G       C       .       PASS    AA=C;DP=98      GT:GQ:DP        1|0:100:27      1|1:72:25       1|1:100:49
+12     83308148        rs7974421       T       C       .       PASS    AA=C;DP=104     GT:GQ:DP        1|0:100:27      1|1:72:25       1|1:100:50
+1      88732436        rs3931885       A       C       .       PASS    AA=A;DP=95      GT:GQ:DP        1|0:100:27      1|1:75:25       1|1:100:35
+17     2963963 rs9893400       T       C       .       PASS    AA=C;DP=115     GT:GQ:DP        1|0:100:27      1|1:75:25       1|1:100:59
+4      53654953        rs11934112      C       T       .       PASS    AA=T;DP=119     GT:GQ:DP        1|0:100:27      1|1:75:26       1|1:100:66
+4      125521698       rs1523489       T       C       .       PASS    AA=T;DP=103     GT:GQ:DP        1|0:100:27      1|1:75:27       1|1:100:49
+18     64327205        rs2319556       A       G       .       PASS    AA=G;DP=92      GT:GQ:DP        1|0:100:27      1|1:78:26       1|1:100:36
+11     25015195        rs1584196       G       A       .       PASS    AA=A;DP=116     GT:GQ:DP        1|0:100:27      1|1:78:26       1|1:100:62
+8      13801232        rs1383497       G       A       .       PASS    AA=A;DP=106     GT:GQ:DP        1|0:100:27      1|1:78:26       1|1:86:51
+3      142159851       rs7643614       G       A       .       PASS    AA=A;DP=127     GT:GQ:DP        1|0:100:27      1|1:78:26       1|1:99:33
+6      131772270       rs58111535      T       A       .       PASS    AA=A;DP=109     GT:GQ:DP        1|0:100:27      1|1:78:27       1|1:100:57
+8      15820399        rs35149218      G       C       .       PASS    AA=G;DP=133     GT:GQ:DP        1|0:100:27      1|1:78:35       1|1:100:73
+4      44255393        rs1898858       A       G       .       PASS    AA=G;DP=123     GT:GQ:DP        1|0:100:27      1|1:84:28       1|1:100:67
+5      138132669       rs825677        T       C       .       PASS    AA=C;DP=119     GT:GQ:DP        1|0:100:27      1|1:8:19        1|1:100:77
+6      10268018        rs16893030      A       G       .       PASS    AA=A;DP=115     GT:GQ:DP        1|0:100:27      1|1:90:30       1|1:100:57
+9      85246683        rs7023220       G       A       .       PASS    AA=G;DP=122     GT:GQ:DP        1|0:100:27      1|1:90:30       1|1:100:65
+6      3044883 rs17548259      C       T       .       PASS    AA=T;DP=115     GT:GQ:DP        1|0:100:27      1|1:90:31       1|1:100:56
+10     11166461        rs17149445      A       G       .       PASS    AA=A;DP=145     GT:GQ:DP        1|0:100:28      0|0:100:33      1|0:100:46
+3      194343380       .       T       G       .       PASS    AA=T;DP=133     GT:GQ:DP        1|0:100:28      0|0:100:33      1|0:100:76
+8      53502764        rs55633593      G       A       .       PASS    AA=g;DP=150     GT:GQ:DP        1|0:100:28      0|0:100:34      1|0:100:36
+13     93354569        .       G       C       .       PASS    AA=G;DP=121     GT:GQ:DP        1|0:100:28      0|0:100:34      1|0:100:51
+20     24611735        rs6106924       C       G       .       PASS    AA=C;DP=163     GT:GQ:DP        1|0:100:28      0|0:100:34      1|0:100:87
+12     14984720        rs10846089      C       T       .       PASS    AA=C;DP=109     GT:GQ:DP        1|0:100:28      0|0:100:35      1|0:100:46
+4      82789178        rs7677887       G       A       .       PASS    AA=A;DP=151     GT:GQ:DP        1|0:100:28      0|0:100:35      1|0:100:86
+4      85398340        .       G       A       .       PASS    AA=G;DP=139     GT:GQ:DP        1|0:100:28      0|0:100:36      1|0:100:77
+14     39512858        .       G       C       .       PASS    AA=G;DP=143     GT:GQ:DP        1|0:100:28      0|0:100:36      1|0:100:79
+4      122071181       .       T       C       .       PASS    AA=T;DP=147     GT:GQ:DP        1|0:100:28      0|0:100:37      1|0:100:42
+1      193226873       .       G       A       .       PASS    AA=G;DP=124     GT:GQ:DP        1|0:100:28      0|0:100:37      1|0:100:57
+2      200854999       rs6721355       A       G       .       PASS    AA=A;DP=136     GT:GQ:DP        1|0:100:28      0|0:100:37      1|0:100:71
+1      34328766        rs6701373       A       C       .       PASS    AA=A;DP=128;HM2;HM3     GT:GQ:DP        1|0:100:28      0|0:18:16       1|0:100:84
+10     36333125        rs10740919      A       G       .       PASS    AA=G;DP=104     GT:GQ:DP        1|0:100:28      0|0:19:23       1|0:100:54
+6      31521767        rs55716452      T       C       .       PASS    AA=N;DP=86      GT:GQ:DP        1|0:100:28      0|0:21:17       1|0:100:40
+12     6712040 .       T       G       .       PASS    AA=T;DP=107     GT:GQ:DP        1|0:100:28      0|0:22:17       1|0:100:48
+7      114566708       rs7798070       A       G       .       PASS    AA=A;DP=106     GT:GQ:DP        1|0:100:28      0|0:24:18       1|0:100:60
+7      68122373        rs60865057      G       T       .       PASS    AA=G;DP=122     GT:GQ:DP        1|0:100:28      0|0:24:22       1|0:100:73
+8      133317453       .       C       G       .       PASS    AA=C;DP=113     GT:GQ:DP        1|0:100:28      0|0:26:8        1|0:100:77
+13     60295528        .       C       T       .       PASS    AA=C;DP=113     GT:GQ:DP        1|0:100:28      0|0:27:23       1|0:100:59
+21     44361165        rs57855582      G       A       .       PASS    AA=G;DP=95      GT:GQ:DP        1|0:100:28      0|0:29:10       1|0:100:47
+11     69924925        rs56731570      G       A       .       PASS    AA=A;DP=112     GT:GQ:DP        1|0:100:28      0|0:29:18       1|0:100:65
+10     77174675        rs7098182       A       C       .       PASS    AA=C;DP=138     GT:GQ:DP        1|0:100:28      0|0:30:24       1|0:100:87
+17     207840  rs11654698      G       C       .       PASS    AA=G;DP=116     GT:GQ:DP        1|0:100:28      0|0:31:14       1|0:100:75
+7      55109369        rs60403348      G       C       .       PASS    AA=G;DP=112     GT:GQ:DP        1|0:100:28      0|0:31:19       1|0:100:68
+1      11675121        .       C       G       .       PASS    AA=C;DP=88      GT:GQ:DP        1|0:100:28      0|0:32:11       1|0:100:38
+7      15606369        rs6964489       G       C       .       PASS    AA=G;DP=97      GT:GQ:DP        1|0:100:28      0|0:32:11       1|0:100:50
+6      107159198       .       A       G       .       PASS    AA=A;DP=155     GT:GQ:DP        1|0:100:28      0|0:32:21       1|0:100:57
+17     55939310        rs8070959       A       G       .       PASS    AA=G;DP=107     GT:GQ:DP        1|0:100:28      0|0:35:11       1|0:100:67
+4      27381590        rs28615352      G       A       .       PASS    AA=G;DP=105     GT:GQ:DP        1|0:100:28      0|0:35:11       1|0:100:67
+22     16476815        rs5747270       C       G       .       PASS    AA=G;DP=107     GT:GQ:DP        1|0:100:28      0|0:35:12       1|0:100:70
+20     10467587        rs634962        A       T       .       PASS    AA=A;DP=99      GT:GQ:DP        1|0:100:28      0|0:35:18       1|0:100:52
+22     47016217        rs133555        G       A       .       PASS    AA=G;DP=110     GT:GQ:DP        1|0:100:28      0|0:36:17       1|0:100:66
+5      22701516        rs7708605       C       A       .       PASS    AA=C;DP=104     GT:GQ:DP        1|0:100:28      0|0:37:18       1|0:100:59
+3      189677133       rs6444297       A       C       .       PASS    AA=A;DP=83      GT:GQ:DP        1|0:100:28      0|0:38:12       1|0:100:44
+2      119681380       rs62159620      T       A       .       PASS    AA=A;DP=94      GT:GQ:DP        1|0:100:28      0|0:38:12       1|0:100:57
+17     24741327        .       G       T       .       PASS    AA=G;DP=100     GT:GQ:DP        1|0:100:28      0|0:38:12       1|0:100:60
+11     90328290        rs35962191      A       G       .       PASS    AA=A;DP=81      GT:GQ:DP        1|0:100:28      0|0:38:13       1|0:100:40
+15     96043647        rs60814147      T       A       .       PASS    AA=T;DP=83      GT:GQ:DP        1|0:100:28      0|0:38:13       1|0:100:45
+4      69702309        rs11736651      C       T       .       PASS    AA=c;DP=99      GT:GQ:DP        1|0:100:28      0|0:38:13       1|0:100:59
+1      61479273        .       G       T       .       PASS    AA=G;DP=117     GT:GQ:DP        1|0:100:28      0|0:38:23       1|0:100:67
+18     57772924        rs60927404      C       T       .       PASS    AA=C;DP=132     GT:GQ:DP        1|0:100:28      0|0:39:18       1|0:100:86
+4      22309018        .       T       C       .       PASS    AA=T;DP=94      GT:GQ:DP        1|0:100:28      0|0:40:18       1|0:100:48
+2      152368158       .       C       T       .       PASS    AA=C;DP=99      GT:GQ:DP        1|0:100:28      0|0:40:18       1|0:100:52
+8      119930273       rs59710397      C       A       .       PASS    AA=C;DP=112     GT:GQ:DP        1|0:100:28      0|0:40:24       1|0:100:61
+14     96315065        rs59579831      C       T       .       PASS    AA=C;DP=112     GT:GQ:DP        1|0:100:28      0|0:41:13       1|0:100:75
+21     26922194        .       G       A       .       PASS    AA=G;DP=113     GT:GQ:DP        1|0:100:28      0|0:41:19       1|0:100:29
+6      150788589       rs877847        C       G       .       PASS    AA=C;DP=128     GT:GQ:DP        1|0:100:28      0|0:42:19       1|0:100:80
+13     110530930       .       G       A       .       PASS    AA=C;DP=114     GT:GQ:DP        1|0:100:28      0|0:42:21       1|0:100:66
+2      176039045       rs7565666       G       A       .       PASS    AA=G;DP=126     GT:GQ:DP        1|0:100:28      0|0:43:23       1|0:100:75
+10     108397888       rs11192993      G       A       .       PASS    AA=A;DP=103     GT:GQ:DP        1|0:100:28      0|0:43:25       1|0:100:52
+9      104063037       .       C       T       .       PASS    AA=C;DP=126     GT:GQ:DP        1|0:100:28      0|0:43:25       1|0:100:71
+10     49314708        .       A       C       .       PASS    AA=C;DP=81      GT:GQ:DP        1|0:100:28      0|0:44:14       1|0:100:38
+1      224488855       rs58467953      C       T       .       PASS    AA=C;DP=99      GT:GQ:DP        1|0:100:28      0|0:44:14       1|0:100:57
+8      142362646       .       C       T       .       PASS    AA=c;DP=112     GT:GQ:DP        1|0:100:28      0|0:44:14       1|0:100:65
+16     87148641        .       C       T       .       PASS    AA=C;DP=124     GT:GQ:DP        1|0:100:28      0|0:44:14       1|0:100:80
+18     35625133        .       G       A       .       PASS    AA=G;DP=108     GT:GQ:DP        1|0:100:28      0|0:44:15       1|0:100:65
+4      186592634       rs58142095      G       C       .       PASS    AA=G;DP=86      GT:GQ:DP        1|0:100:28      0|0:44:16       1|0:100:44
+9      137029591       .       T       C       .       PASS    AA=T;DP=127     GT:GQ:DP        1|0:100:28      0|0:45:19       1|0:100:80
+9      112920413       rs56895044      T       G       .       PASS    AA=T;DP=112     GT:GQ:DP        1|0:100:28      0|0:45:24       1|0:100:60
+1      211928271       rs1509868       A       G       .       PASS    AA=G;DP=112;HM2;HM3     GT:GQ:DP        1|0:100:28      0|0:46:26       1|0:100:58
+17     39337538        rs231485        G       A       .       PASS    AA=g;DP=117     GT:GQ:DP        1|0:100:28      0|0:46:26       1|0:100:64
+6      46021227        rs9349339       A       C       .       PASS    AA=A;DP=138     GT:GQ:DP        1|0:100:28      0|0:46:26       1|0:100:69
+9      5666329 .       A       G       .       PASS    AA=A;DP=101     GT:GQ:DP        1|0:100:28      0|0:47:15       1|0:100:58
+7      64400602        rs532409        G       A       .       PASS    AA=g;DP=120     GT:GQ:DP        1|0:100:28      0|0:47:16       1|0:100:78
+7      148335914       .       C       T       .       PASS    AA=C;DP=123     GT:GQ:DP        1|0:100:28      0|0:47:16       1|0:100:80
+16     70551458        rs8052028       G       A       .       PASS    AA=G;DP=90      GT:GQ:DP        1|0:100:28      0|0:47:17       1|0:100:47
+2      180629379       rs2672664       G       A       .       PASS    AA=G;DP=124     GT:GQ:DP        1|0:100:28      0|0:47:17       1|0:100:81
+10     89550804        rs11525279      G       A       .       PASS    AA=G;DP=114     GT:GQ:DP        1|0:100:28      0|0:47:18       1|0:100:68
+4      77492091        .       C       T       .       PASS    AA=C;DP=104     GT:GQ:DP        1|0:100:28      0|0:47:23       1|0:100:52
+12     42824454        .       C       T       .       PASS    AA=C;DP=126     GT:GQ:DP        1|0:100:28      0|0:49:26       1|0:100:74
+12     42026651        rs1392993       C       A       .       PASS    AA=C;DP=142     GT:GQ:DP        1|0:100:28      0|0:49:27       1|0:100:40
+4      89091695        rs60518061      G       C       .       PASS    AA=C;DP=94      GT:GQ:DP        1|0:100:28      0|0:50:16       1|0:100:39
+9      111341836       rs7030085       C       G       .       PASS    AA=C;DP=98      GT:GQ:DP        1|0:100:28      0|0:50:16       1|0:100:55
+8      22344760        rs34668161      A       G       .       PASS    AA=A;DP=101     GT:GQ:DP        1|0:100:28      0|0:50:16       1|0:100:57
+8      128254161       rs61056137      G       A       .       PASS    AA=G;DP=147     GT:GQ:DP        1|0:100:28      0|0:50:16       1|0:100:59
+6      28167196        rs9393888       G       C       .       PASS    AA=C;DP=104     GT:GQ:DP        1|0:100:28      0|0:50:16       1|0:100:60
+4      114336921       rs2285710       C       T       .       PASS    AA=C;DP=104     GT:GQ:DP        1|0:100:28      0|0:50:16       1|0:100:61
+12     5180088 rs492829        T       C       .       PASS    AA=T;DP=103     GT:GQ:DP        1|0:100:28      0|0:50:16       1|0:100:63
+1      110352785       .       A       G       .       PASS    AA=A;DP=109     GT:GQ:DP        1|0:100:28      0|0:50:16       1|0:100:66
+1      231483051       rs4649294       C       T       .       PASS    AA=C;DP=111;HM2 GT:GQ:DP        1|0:100:28      0|0:50:16       1|0:100:67
+14     83536848        .       A       G       .       PASS    AA=A;DP=112     GT:GQ:DP        1|0:100:28      0|0:50:16       1|0:100:69
+1      116056269       rs9428079       T       C       .       PASS    AA=T;DP=113     GT:GQ:DP        1|0:100:28      0|0:50:16       1|0:100:70
+11     86201073        rs17149443      A       G       .       PASS    AA=A;DP=121     GT:GQ:DP        1|0:100:28      0|0:50:16       1|0:100:77
+9      1128616 rs10959703      G       A       .       PASS    AA=g;DP=100     GT:GQ:DP        1|0:100:28      0|0:50:17       1|0:100:56
+2      43152663        rs58976064      T       C       .       PASS    AA=T;DP=123     GT:GQ:DP        1|0:100:28      0|0:50:18       1|0:100:77
+5      39663628        .       C       T       .       PASS    AA=C;DP=118     GT:GQ:DP        1|0:100:28      0|0:51:22       1|0:100:70
+3      5004354 rs11920786      G       T       .       PASS    AA=T;DP=152     GT:GQ:DP        1|0:100:28      0|0:52:31       1|0:100:48
+17     26963158        rs7207256       C       T       .       PASS    AA=C;DP=89      GT:GQ:DP        1|0:100:28      0|0:53:17       1|0:100:33
+11     75949743        .       C       A       .       PASS    AA=C;DP=120     GT:GQ:DP        1|0:100:28      0|0:53:17       1|0:100:34
+4      70588827        rs57279139      C       G       .       PASS    AA=C;DP=83      GT:GQ:DP        1|0:100:28      0|0:53:17       1|0:100:37
+22     24189408        rs8135468       G       A       .       PASS    AA=G;DP=99      GT:GQ:DP        1|0:100:28      0|0:53:17       1|0:100:47
+13     86741485        .       C       T       .       PASS    AA=c;DP=92      GT:GQ:DP        1|0:100:28      0|0:53:17       1|0:100:48
+2      13377274        rs13422775      T       C       .       PASS    AA=T;DP=94      GT:GQ:DP        1|0:100:28      0|0:53:17       1|0:100:49
+11     106863901       .       A       G       .       PASS    AA=A;DP=94      GT:GQ:DP        1|0:100:28      0|0:53:17       1|0:100:52
+20     7697144 rs16993985      G       A       .       PASS    AA=g;DP=103     GT:GQ:DP        1|0:100:28      0|0:53:17       1|0:100:57
+14     87607688        rs12586451      C       G       .       PASS    AA=C;DP=103     GT:GQ:DP        1|0:100:28      0|0:53:17       1|0:100:59
+12     88166215        rs12231535      T       C       .       PASS    AA=T;DP=109     GT:GQ:DP        1|0:100:28      0|0:53:17       1|0:100:61
+4      30966276        .       C       G       .       PASS    AA=C;DP=107     GT:GQ:DP        1|0:100:28      0|0:53:17       1|0:100:64
+21     32368508        .       G       T       .       PASS    AA=G;DP=116     GT:GQ:DP        1|0:100:28      0|0:53:17       1|0:100:73
+13     45294225        rs11620324      A       G       .       PASS    AA=G;DP=100     GT:GQ:DP        1|0:100:28      0|0:53:18       1|0:100:56
+20     40534626        rs41279262      A       G       .       PASS    AA=A;DP=110     GT:GQ:DP        1|0:100:28      0|0:53:18       1|0:100:64
+6      91537489        rs7341365       A       G       .       PASS    AA=G;DP=97      GT:GQ:DP        1|0:100:28      0|0:53:19       1|0:100:48
+4      180089271       .       G       A       .       PASS    AA=G;DP=95      GT:GQ:DP        1|0:100:28      0|0:53:20       1|0:100:45
+2      77912763        .       C       T       .       PASS    AA=c;DP=110     GT:GQ:DP        1|0:100:28      0|0:53:21       1|0:100:60
+7      88600626        .       G       T       .       PASS    AA=G;DP=110     GT:GQ:DP        1|0:100:28      0|0:53:23       1|0:100:60
+3      128958117       rs34421818      A       G       .       PASS    AA=A;DP=122     GT:GQ:DP        1|0:100:28      0|0:54:18       1|0:100:34
+3      7153598 .       C       A       .       PASS    AA=C;DP=125     GT:GQ:DP        1|0:100:28      0|0:55:29       1|0:100:69
+2      3699811 rs13401122      C       A       .       PASS    AA=A;DP=126     GT:GQ:DP        1|0:100:28      0|0:55:29       1|0:100:70
+8      31154225        .       A       G       .       PASS    AA=A;DP=134     GT:GQ:DP        1|0:100:28      0|0:55:29       1|0:100:79
+19     60736916        rs10410324      C       T       .       PASS    AA=C;DP=106     GT:GQ:DP        1|0:100:28      0|0:56:18       1|0:100:59
+17     26667690        rs12940802      C       A       .       PASS    AA=A;DP=106     GT:GQ:DP        1|0:100:28      0|0:56:18       1|0:100:62
+5      121714814       rs10051871      T       C       .       PASS    AA=T;DP=111     GT:GQ:DP        1|0:100:28      0|0:56:18       1|0:100:65
+4      183153082       .       C       G       .       PASS    AA=T;DP=125     GT:GQ:DP        1|0:100:28      0|0:56:18       1|0:100:78
+5      100760941       .       T       C       .       PASS    AA=T;DP=92      GT:GQ:DP        1|0:100:28      0|0:56:19       1|0:100:29
+20     54803888        .       G       C       .       PASS    AA=G;DP=130     GT:GQ:DP        1|0:100:28      0|0:56:19       1|0:100:39
+5      90534330        rs59270109      T       C       .       PASS    AA=C;DP=96      GT:GQ:DP        1|0:100:28      0|0:56:19       1|0:100:47
+1      173647967       rs61530561      G       A       .       PASS    AA=G;DP=120     GT:GQ:DP        1|0:100:28      0|0:56:19       1|0:100:67
+8      6686280 .       C       T       .       PASS    AA=.;DP=119     GT:GQ:DP        1|0:100:28      0|0:56:19       1|0:100:70
+5      179804568       rs13357410      T       C       .       PASS    AA=C;DP=114     GT:GQ:DP        1|0:100:28      0|0:56:19       1|0:100:72
+2      3920506 rs10174801      T       C       .       PASS    AA=T;DP=122     GT:GQ:DP        1|0:100:28      0|0:56:19       1|0:100:77
+11     26128492        .       T       A       .       PASS    AA=t;DP=133     GT:GQ:DP        1|0:100:28      0|0:56:19       1|0:100:88
+3      186445431       rs2042039       G       A       .       PASS    AA=A;DP=100     GT:GQ:DP        1|0:100:28      0|0:56:20       1|0:100:52
+4      175680940       rs17524423      C       T       .       PASS    AA=C;DP=114     GT:GQ:DP        1|0:100:28      0|0:56:20       1|0:100:65
+22     31197158        .       T       G       .       PASS    AA=T;DP=102     GT:GQ:DP        1|0:100:28      0|0:56:25       1|0:100:37
+20     6507407 .       G       A       .       PASS    AA=G;DP=115     GT:GQ:DP        1|0:100:28      0|0:57:20       1|0:100:66
+7      9177196 rs1440250       T       A       .       PASS    AA=T;DP=95      GT:GQ:DP        1|0:100:28      0|0:59:19       1|0:100:32
+6      81696914        rs6915948       T       A       .       PASS    AA=T;DP=100     GT:GQ:DP        1|0:100:28      0|0:59:19       1|0:100:35
+1      14912954        rs10927512      G       A       .       PASS    AA=G;DP=91      GT:GQ:DP        1|0:100:28      0|0:59:19       1|0:100:37
+1      212526275       rs1353718       A       T       .       PASS    AA=A;DP=90      GT:GQ:DP        1|0:100:28      0|0:59:19       1|0:100:38
+12     98050354        rs10860394      G       A       .       PASS    AA=A;DP=99      GT:GQ:DP        1|0:100:28      0|0:59:19       1|0:100:52
+16     55627493        .       C       T       .       PASS    AA=C;DP=116     GT:GQ:DP        1|0:100:28      0|0:59:19       1|0:100:55
+10     86519586        rs2471416       A       G       .       PASS    AA=A;DP=105     GT:GQ:DP        1|0:100:28      0|0:59:19       1|0:100:57
+11     14493532        rs11023246      T       C       .       PASS    AA=T;DP=107     GT:GQ:DP        1|0:100:28      0|0:59:19       1|0:100:60
+21     35675479        rs2742148       C       A       .       PASS    AA=C;DP=112     GT:GQ:DP        1|0:100:28      0|0:59:19       1|0:100:66
+4      94914345        rs58252069      T       C       .       PASS    AA=T;DP=122     GT:GQ:DP        1|0:100:28      0|0:59:19       1|0:100:73
+10     27641723        rs11015691      G       A       .       PASS    AA=.;DP=123     GT:GQ:DP        1|0:100:28      0|0:59:19       1|0:100:77
+5      156922751       rs13356677      G       A       .       PASS    AA=G;DP=127     GT:GQ:DP        1|0:100:28      0|0:59:19       1|0:100:80
+12     21943414        rs34243384      G       A       .       PASS    AA=G;DP=132     GT:GQ:DP        1|0:100:28      0|0:59:19       1|0:100:85
+10     1114135 .       G       A       .       PASS    AA=G;DP=99      GT:GQ:DP        1|0:100:28      0|0:59:20       1|0:100:52
+14     69569105        .       C       G       .       PASS    AA=C;DP=107     GT:GQ:DP        1|0:100:28      0|0:59:20       1|0:100:57
+14     85297281        rs11620814      T       C       .       PASS    AA=T;DP=120     GT:GQ:DP        1|0:100:28      0|0:59:20       1|0:100:69
+10     11290846        .       G       A       .       PASS    AA=G;DP=134     GT:GQ:DP        1|0:100:28      0|0:59:20       1|0:100:89
+3      7777705 rs9877295       T       C       .       PASS    AA=T;DP=119     GT:GQ:DP        1|0:100:28      0|0:59:22       1|0:100:69
+8      138984900       rs2705302       G       A       .       PASS    AA=g;DP=135     GT:GQ:DP        1|0:100:28      0|0:60:31       1|0:100:79
+2      31701389        rs56723232      G       T       .       PASS    AA=G;DP=134     GT:GQ:DP        1|0:100:28      0|0:61:32       1|0:100:72
+7      119502873       .       G       C       .       PASS    AA=G;DP=87      GT:GQ:DP        1|0:100:28      0|0:62:20       1|0:100:31
+3      25405002        rs11927206      A       G       .       PASS    AA=G;DP=104     GT:GQ:DP        1|0:100:28      0|0:62:20       1|0:100:57
+8      120215529       rs56812049      A       G       .       PASS    AA=A;DP=120     GT:GQ:DP        1|0:100:28      0|0:62:20       1|0:100:58
+6      158146973       rs7775654       C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        1|0:100:28      0|0:62:20       1|0:100:63
+7      78264919        rs37868 T       C       .       PASS    AA=T;DP=119     GT:GQ:DP        1|0:100:28      0|0:62:20       1|0:100:71
+4      86516685        rs9306997       A       G       .       PASS    AA=A;DP=124     GT:GQ:DP        1|0:100:28      0|0:62:20       1|0:100:74
+19     36357063        .       C       T       .       PASS    AA=C;DP=133     GT:GQ:DP        1|0:100:28      0|0:62:20       1|0:100:83
+4      17016684        .       G       A       .       PASS    AA=G;DP=99      GT:GQ:DP        1|0:100:28      0|0:62:21       1|0:100:50
+11     104833879       rs12288207      G       A       .       PASS    AA=G;DP=104     GT:GQ:DP        1|0:100:28      0|0:62:21       1|0:100:52
+13     27572028        .       A       T       .       PASS    AA=A;DP=108     GT:GQ:DP        1|0:100:28      0|0:62:21       1|0:100:60
+1      48938012        rs55891423      C       T       .       PASS    AA=C;DP=109     GT:GQ:DP        1|0:100:28      0|0:62:21       1|0:100:61
+17     6685078 .       T       C       .       PASS    AA=T;DP=123     GT:GQ:DP        1|0:100:28      0|0:62:21       1|0:100:75
+7      67550019        rs12540706      A       G       .       PASS    AA=A;DP=134     GT:GQ:DP        1|0:100:28      0|0:62:21       1|0:100:86
+2      59042142        rs2863300       G       T       .       PASS    AA=G;DP=96      GT:GQ:DP        1|0:100:28      0|0:63:24       1|0:100:44
+14     51540264        .       T       C       .       PASS    AA=T;DP=117     GT:GQ:DP        1|0:100:28      0|0:64:26       1|0:100:64
+3      137753633       .       C       A       .       PASS    AA=C;DP=119     GT:GQ:DP        1|0:100:28      0|0:64:27       1|0:100:65
+5      50021409        rs11954386      A       G       .       PASS    AA=A;DP=134     GT:GQ:DP        1|0:100:28      0|0:64:27       1|0:100:80
+1      76155885        rs10782582      A       G       .       PASS    AA=A;DP=88;HM3  GT:GQ:DP        1|0:100:28      0|0:65:21       1|0:100:26
+18     56063765        rs9955666       G       A       .       PASS    AA=G;DP=122     GT:GQ:DP        1|0:100:28      0|0:65:21       1|0:100:37
+17     19641442        rs62636609      C       T       .       PASS    AA=C;DP=97      GT:GQ:DP        1|0:100:28      0|0:65:21       1|0:100:47
+4      89900002        rs56116025      T       G       .       PASS    AA=T;DP=98      GT:GQ:DP        1|0:100:28      0|0:65:21       1|0:100:49
+21     43789066        rs1836856       A       T       .       PASS    AA=A;DP=102     GT:GQ:DP        1|0:100:28      0|0:65:21       1|0:100:53
+12     85034074        .       C       T       .       PASS    AA=C;DP=113     GT:GQ:DP        1|0:100:28      0|0:65:21       1|0:100:62
+9      122717950       rs2159778       G       A       .       PASS    AA=N;DP=113     GT:GQ:DP        1|0:100:28      0|0:65:21       1|0:100:64
+16     9376580 .       C       G       .       PASS    AA=C;DP=117     GT:GQ:DP        1|0:100:28      0|0:65:21       1|0:100:67
+10     104552087       rs7086400       G       A       .       PASS    AA=G;DP=118     GT:GQ:DP        1|0:100:28      0|0:65:21       1|0:100:68
+1      40774213        .       G       T       .       PASS    AA=G;DP=120     GT:GQ:DP        1|0:100:28      0|0:65:21       1|0:100:69
+1      241624896       .       A       G       .       PASS    AA=A;DP=118     GT:GQ:DP        1|0:100:28      0|0:65:21       1|0:100:71
+21     23791076        .       A       C       .       PASS    AA=A;DP=119     GT:GQ:DP        1|0:100:28      0|0:65:21       1|0:100:73
+2      24244344        rs6733163       G       C       .       PASS    AA=C;DP=124     GT:GQ:DP        1|0:100:28      0|0:65:21       1|0:100:74
+16     12628967        .       G       A       .       PASS    AA=G;DP=127     GT:GQ:DP        1|0:100:28      0|0:65:21       1|0:100:75
+22     23997923        rs6004520       A       G       .       PASS    AA=N;DP=115     GT:GQ:DP        1|0:100:28      0|0:65:21       1|0:57:66
+21     38582592        rs7279217       T       C       .       PASS    AA=C;DP=128     GT:GQ:DP        1|0:100:28      0|0:65:22       1|0:100:78
+14     60985504        rs2296273       G       A       .       PASS    AA=G;DP=114     GT:GQ:DP        1|0:100:28      0|0:65:23       1|0:100:63
+8      13677578        .       C       T       .       PASS    AA=C;DP=114     GT:GQ:DP        1|0:100:28      0|0:65:23       1|0:100:64
+11     102656542       rs11225648      A       G       .       PASS    AA=A;DP=132     GT:GQ:DP        1|0:100:28      0|0:65:23       1|0:100:79
+2      3868067 rs61584289      G       A       .       PASS    AA=G;DP=131     GT:GQ:DP        1|0:100:28      0|0:65:23       1|0:100:79
+7      15455904        .       C       T       .       PASS    AA=c;DP=100     GT:GQ:DP        1|0:100:28      0|0:68:22       1|0:100:52
+3      183848307       .       T       C       .       PASS    AA=T;DP=103     GT:GQ:DP        1|0:100:28      0|0:68:22       1|0:100:53
+10     96691840        rs9332120       T       C       .       PASS    AA=t;DP=111     GT:GQ:DP        1|0:100:28      0|0:68:22       1|0:100:62
+12     68389335        rs775464        T       C       .       PASS    AA=T;DP=109     GT:GQ:DP        1|0:100:28      0|0:68:22       1|0:100:62
+12     4737500 rs7305387       T       C       .       PASS    AA=T;DP=126     GT:GQ:DP        1|0:100:28      0|0:68:22       1|0:100:63
+6      91782217        .       T       A       .       PASS    AA=T;DP=125     GT:GQ:DP        1|0:100:28      0|0:68:22       1|0:100:73
+9      107124613       rs10820798      G       A       .       PASS    AA=A;DP=149     GT:GQ:DP        1|0:100:28      0|0:68:22       1|0:100:98
+5      180434597       .       T       C       .       PASS    AA=T;DP=142     GT:GQ:DP        1|0:100:28      0|0:68:23       1|0:100:35
+4      124449094       rs11098705      C       T       .       PASS    AA=C;DP=100     GT:GQ:DP        1|0:100:28      0|0:68:23       1|0:100:36
+3      68451682        .       T       C       .       PASS    AA=T;DP=94      GT:GQ:DP        1|0:100:28      0|0:68:23       1|0:100:41
+5      127312692       .       G       A       .       PASS    AA=G;DP=117     GT:GQ:DP        1|0:100:28      0|0:68:23       1|0:100:64
+7      28141834        rs59611710      C       G       .       PASS    AA=C;DP=97      GT:GQ:DP        1|0:100:28      0|0:68:24       1|0:100:46
+6      147088257       .       C       T       .       PASS    AA=C;DP=113     GT:GQ:DP        1|0:100:28      0|0:68:25       1|0:100:60
+4      12163826        rs11935265      T       C       .       PASS    AA=T;DP=111     GT:GQ:DP        1|0:100:28      0|0:70:29       1|0:100:56
+1      85166893        .       A       G       .       PASS    AA=A;DP=80      GT:GQ:DP        1|0:100:28      0|0:71:23       1|0:100:28
+10     63689750        rs7094950       T       C       .       PASS    AA=T;DP=138     GT:GQ:DP        1|0:100:28      0|0:71:23       1|0:100:44
+3      68992633        .       G       A       .       PASS    AA=G;DP=117     GT:GQ:DP        1|0:100:28      0|0:71:23       1|0:100:65
+4      57180525        .       G       A       .       PASS    AA=G;DP=122     GT:GQ:DP        1|0:100:28      0|0:71:23       1|0:100:74
+16     19492694        rs7189880       C       T       .       PASS    AA=C;DP=131     GT:GQ:DP        1|0:100:28      0|0:71:23       1|0:100:80
+6      27977610        rs1873212       C       T       .       PASS    AA=C;DP=134     GT:GQ:DP        1|0:100:28      0|0:71:23       1|0:100:85
+1      66416925        rs496713        G       A       .       PASS    AA=A;DP=103;HM2;HM3     GT:GQ:DP        1|0:100:28      0|0:71:24       1|0:100:51
+18     13454556        .       T       C       .       PASS    AA=T;DP=108     GT:GQ:DP        1|0:100:28      0|0:71:24       1|0:100:58
+8      18868725        rs59857327      G       T       .       PASS    AA=T;DP=116     GT:GQ:DP        1|0:100:28      0|0:71:24       1|0:100:64
+14     80795423        rs61978875      T       C       .       PASS    AA=T;DP=117     GT:GQ:DP        1|0:100:28      0|0:71:24       1|0:100:65
+19     54387583        .       T       C       .       PASS    AA=N;DP=114     GT:GQ:DP        1|0:100:28      0|0:71:24       1|0:100:65
+2      78115607        rs1405588       G       A       .       PASS    AA=G;DP=116     GT:GQ:DP        1|0:100:28      0|0:71:24       1|0:100:65
+4      94283139        .       C       T       .       PASS    AA=C;DP=122     GT:GQ:DP        1|0:100:28      0|0:71:24       1|0:100:69
+8      70035435        rs7009352       A       G       .       PASS    AA=A;DP=124     GT:GQ:DP        1|0:100:28      0|0:71:25       1|0:100:71
+2      184029922       .       T       A       .       PASS    AA=T;DP=126     GT:GQ:DP        1|0:100:28      0|0:71:31       1|0:100:66
+1      116656426       .       T       G       .       PASS    AA=T;DP=142     GT:GQ:DP        1|0:100:28      0|0:72:30       1|0:100:85
+11     121901383       rs10892855      C       A       .       PASS    AA=C;DP=152     GT:GQ:DP        1|0:100:28      0|0:72:35       1|0:100:88
+1      150513350       rs12746239      G       A       .       PASS    AA=G;DP=128;HM2;HM3     GT:GQ:DP        1|0:100:28      0|0:74:24       1|0:100:29
+6      66708374        rs9354347       A       T       .       PASS    AA=A;DP=100     GT:GQ:DP        1|0:100:28      0|0:74:24       1|0:100:48
+10     33494368        .       T       A       .       PASS    AA=T;DP=108     GT:GQ:DP        1|0:100:28      0|0:74:24       1|0:100:56
+11     7907245 rs1397596       A       G       .       PASS    AA=A;DP=109     GT:GQ:DP        1|0:100:28      0|0:74:24       1|0:100:58
+20     53941430        rs6024519       C       T       .       PASS    AA=C;DP=112     GT:GQ:DP        1|0:100:28      0|0:74:24       1|0:100:58
+2      208138133       rs61098834      A       G       .       PASS    AA=a;DP=112     GT:GQ:DP        1|0:100:28      0|0:74:24       1|0:100:60
+3      32247479        rs9833384       T       C       .       PASS    AA=C;DP=112     GT:GQ:DP        1|0:100:28      0|0:74:24       1|0:100:61
+4      101055811       rs2081626       T       C       .       PASS    AA=T;DP=117     GT:GQ:DP        1|0:100:28      0|0:74:24       1|0:100:64
+5      39218430        rs16868261      G       A       .       PASS    AA=G;DP=121     GT:GQ:DP        1|0:100:28      0|0:74:24       1|0:100:70
+6      154471309       rs60254893      C       T       .       PASS    AA=C;DP=124     GT:GQ:DP        1|0:100:28      0|0:74:24       1|0:100:70
+1      64192650        .       G       A       .       PASS    AA=G;DP=121     GT:GQ:DP        1|0:100:28      0|0:74:24       1|0:100:72
+7      50808126        rs6960912       A       T       .       PASS    AA=T;DP=115     GT:GQ:DP        1|0:100:28      0|0:74:25       1|0:100:64
+10     127916740       rs7906081       A       G       .       PASS    AA=A;DP=115     GT:GQ:DP        1|0:100:28      0|0:74:25       1|0:100:65
+2      189489592       rs17357358      C       T       .       PASS    AA=T;DP=120     GT:GQ:DP        1|0:100:28      0|0:74:25       1|0:100:70
+11     41847166        rs11036613      C       T       .       PASS    AA=T;DP=96      GT:GQ:DP        1|0:100:28      0|0:74:26       1|0:100:40
+2      17870794        rs35925486      T       C       .       PASS    AA=T;DP=147     GT:GQ:DP        1|0:100:28      0|0:74:26       1|0:100:92
+3      11064702        .       A       T       .       PASS    AA=A;DP=104     GT:GQ:DP        1|0:100:28      0|0:77:25       1|0:100:42
+7      36312339        .       T       G       .       PASS    AA=T;DP=109     GT:GQ:DP        1|0:100:28      0|0:77:25       1|0:100:44
+3      163372798       .       T       C       .       PASS    AA=T;DP=116     GT:GQ:DP        1|0:100:28      0|0:77:25       1|0:100:62
+5      143657108       rs57702699      T       C       .       PASS    AA=T;DP=117     GT:GQ:DP        1|0:100:28      0|0:77:25       1|0:100:66
+18     67076695        .       C       T       .       PASS    AA=c;DP=131     GT:GQ:DP        1|0:100:28      0|0:77:25       1|0:100:75
+3      5358066 .       T       C       .       PASS    AA=T;DP=128     GT:GQ:DP        1|0:100:28      0|0:77:25       1|0:100:75
+4      118549903       rs17861878      C       G       .       PASS    AA=C;DP=110     GT:GQ:DP        1|0:100:28      0|0:77:26       1|0:100:54
+6      169778234       rs7775504       A       C       .       PASS    AA=C;DP=109     GT:GQ:DP        1|0:100:28      0|0:77:26       1|0:100:55
+16     12470999        rs9924326       A       G       .       PASS    AA=A;DP=119     GT:GQ:DP        1|0:100:28      0|0:77:26       1|0:100:65
+7      126167345       rs35825148      T       C       .       PASS    AA=T;DP=143     GT:GQ:DP        1|0:100:28      0|0:77:26       1|0:100:67
+2      53147815        rs17189154      T       C       .       PASS    AA=T;DP=130     GT:GQ:DP        1|0:100:28      0|0:77:26       1|0:100:77
+7      69399009        rs6952281       A       G       .       PASS    AA=G;DP=131     GT:GQ:DP        1|0:100:28      0|0:77:26       1|0:100:78
+15     98392918        .       T       G       .       PASS    AA=T;DP=137     GT:GQ:DP        1|0:100:28      0|0:77:26       1|0:100:84
+12     4077012 rs59810408      G       A       .       PASS    AA=G;DP=140     GT:GQ:DP        1|0:100:28      0|0:77:26       1|0:100:85
+6      3767503 .       C       T       .       PASS    AA=T;DP=150     GT:GQ:DP        1|0:100:28      0|0:77:27       1|0:100:50
+2      166458272       .       A       G       .       PASS    AA=A;DP=114     GT:GQ:DP        1|0:100:28      0|0:77:27       1|0:100:59
+5      55165962        .       A       G       .       PASS    AA=A;DP=116     GT:GQ:DP        1|0:100:28      0|0:77:27       1|0:100:64
+1      77792261        rs7524147       C       A       .       PASS    AA=A;DP=140     GT:GQ:DP        1|0:100:28      0|0:77:34       1|0:100:78
+11     19494585        .       A       T       .       PASS    AA=A;DP=132     GT:GQ:DP        1|0:100:28      0|0:79:32       1|0:100:71
+4      29935043        rs28448826      C       T       .       PASS    AA=c;DP=98      GT:GQ:DP        1|0:100:28      0|0:80:26       1|0:100:43
+4      20897067        rs16870715      G       A       .       PASS    AA=A;DP=103     GT:GQ:DP        1|0:100:28      0|0:80:26       1|0:100:47
+13     72894183        rs9318176       A       G       .       PASS    AA=A;DP=102     GT:GQ:DP        1|0:100:28      0|0:80:26       1|0:100:49
+14     30009315        rs17096826      T       A       .       PASS    AA=A;DP=150     GT:GQ:DP        1|0:100:28      0|0:80:26       1|0:100:50
+4      99246787        rs1426665       C       T       .       PASS    AA=C;DP=122     GT:GQ:DP        1|0:100:28      0|0:80:26       1|0:100:67
+2      197559151       rs17384622      C       G       .       PASS    AA=C;DP=127     GT:GQ:DP        1|0:100:28      0|0:80:26       1|0:100:73
+6      137048809       rs7761896       T       C       .       PASS    AA=T;DP=127     GT:GQ:DP        1|0:100:28      0|0:80:26       1|0:100:74
+16     17452303        rs61631548      G       C       .       PASS    AA=G;DP=128     GT:GQ:DP        1|0:100:28      0|0:80:26       1|0:100:75
+2      55999045        rs2277887       T       C       .       PASS    AA=T;DP=132     GT:GQ:DP        1|0:100:28      0|0:80:26       1|0:100:80
+16     79153613        rs4291914       T       C       .       PASS    AA=T;DP=145     GT:GQ:DP        1|0:100:28      0|0:80:27       1|0:100:49
+20     50749392        rs56275654      A       C       .       PASS    AA=A;DP=110     GT:GQ:DP        1|0:100:28      0|0:80:27       1|0:100:56
+14     55295339        .       C       G       .       PASS    AA=C;DP=129     GT:GQ:DP        1|0:100:28      0|0:80:27       1|0:100:70
+7      68919567        rs7781403       A       G       .       PASS    AA=A;DP=150     GT:GQ:DP        1|0:100:28      0|0:80:28       1|0:100:91
+1      219758323       rs59677840      C       A       .       PASS    AA=C;DP=104     GT:GQ:DP        1|0:100:28      0|0:83:27       1|0:100:46
+1      111609669       .       T       C       .       PASS    AA=T;DP=103     GT:GQ:DP        1|0:100:28      0|0:83:27       1|0:100:50
+7      22324823        .       G       A       .       PASS    AA=G;DP=158     GT:GQ:DP        1|0:100:28      0|0:83:27       1|0:100:56
+12     50138778        rs6580835       C       T       .       PASS    AA=C;DP=122     GT:GQ:DP        1|0:100:28      0|0:83:27       1|0:100:69
+9      16245549        rs4097746       A       C       .       PASS    AA=A;DP=139     GT:GQ:DP        1|0:100:28      0|0:83:28       1|0:100:43
+16     60125173        .       C       T       .       PASS    AA=C;DP=113     GT:GQ:DP        1|0:100:28      0|0:83:28       1|0:100:57
+11     39788031        rs12286854      G       A       .       PASS    AA=G;DP=119     GT:GQ:DP        1|0:100:28      0|0:83:28       1|0:100:65
+4      107777567       .       G       A       .       PASS    AA=G;DP=114     GT:GQ:DP        1|0:100:28      0|0:83:29       1|0:100:58
+1      19816795        rs1320980       G       A       .       PASS    AA=G;DP=122;HM2 GT:GQ:DP        1|0:100:28      0|0:83:29       1|0:100:63
+18     34375734        rs60289328      C       A       .       PASS    AA=A;DP=148     GT:GQ:DP        1|0:100:28      0|0:83:29       1|0:100:94
+6      114532477       .       A       C       .       PASS    AA=A;DP=116     GT:GQ:DP        1|0:100:28      0|0:84:33       1|0:100:55
+1      89761476        .       A       G       .       PASS    AA=A;DP=128     GT:GQ:DP        1|0:100:28      0|0:86:28       1|0:100:74
+2      207476959       .       T       G       .       PASS    AA=T;DP=127     GT:GQ:DP        1|0:100:28      0|0:86:28       1|0:100:76
+2      22350498        rs4350779       T       C       .       PASS    AA=T;DP=138     GT:GQ:DP        1|0:100:28      0|0:86:28       1|0:100:81
+9      106061510       rs7034022       T       G       .       PASS    AA=G;DP=145     GT:GQ:DP        1|0:100:28      0|0:86:28       1|0:100:90
+1      151207997       rs57877962      G       A       .       PASS    AA=G;DP=123     GT:GQ:DP        1|0:100:28      0|0:86:29       1|0:100:67
+3      184394962       rs9815187       G       C       .       PASS    AA=g;DP=138     GT:GQ:DP        1|0:100:28      0|0:86:29       1|0:100:77
+5      119964104       .       A       G       .       PASS    AA=A;DP=136     GT:GQ:DP        1|0:100:28      0|0:86:29       1|0:100:78
+9      107636472       rs58257574      A       G       .       PASS    AA=A;DP=129     GT:GQ:DP        1|0:100:28      0|0:89:29       1|0:100:31
+1      227872798       .       A       G       .       PASS    AA=A;DP=144     GT:GQ:DP        1|0:100:28      0|0:89:29       1|0:100:44
+3      78148591        rs12636817      C       T       .       PASS    AA=T;DP=119     GT:GQ:DP        1|0:100:28      0|0:89:29       1|0:100:62
+1      72589687        rs6690399       A       T       .       PASS    AA=A;DP=128     GT:GQ:DP        1|0:100:28      0|0:89:29       1|0:100:73
+5      66223366        rs461702        A       G       .       PASS    AA=A;DP=132     GT:GQ:DP        1|0:100:28      0|0:89:29       1|0:100:77
+20     59053532        rs60286821      C       G       .       PASS    AA=C;DP=120     GT:GQ:DP        1|0:100:28      0|0:89:30       1|0:100:61
+2      206150670       rs11895305      G       C       .       PASS    AA=C;DP=131     GT:GQ:DP        1|0:100:28      0|0:89:30       1|0:100:73
+15     58293223        .       G       A       .       PASS    AA=G;DP=152     GT:GQ:DP        1|0:100:28      0|0:89:30       1|0:100:95
+14     20266519        .       T       C       .       PASS    AA=T;DP=154     GT:GQ:DP        1|0:100:28      0|0:89:31       1|0:100:49
+10     28024485        .       G       A       .       PASS    AA=G;DP=113     GT:GQ:DP        1|0:100:28      0|0:89:31       1|0:100:55
+1      213050534       rs61818178      C       T       .       PASS    AA=C;DP=119     GT:GQ:DP        1|0:100:28      0|0:89:31       1|0:100:59
+2      229952916       .       G       T       .       PASS    AA=T;DP=152     GT:GQ:DP        1|0:100:28      0|0:91:42       1|0:100:79
+13     42191306        .       G       A       .       PASS    AA=G;DP=144     GT:GQ:DP        1|0:100:28      0|0:92:30       1|0:100:48
+18     17931932        rs1010810       G       A       .       PASS    AA=G;DP=128     GT:GQ:DP        1|0:100:28      0|0:92:30       1|0:100:70
+3      137112592       rs6787502       A       T       .       PASS    AA=T;DP=138     GT:GQ:DP        1|0:100:28      0|0:92:30       1|0:100:80
+5      92690716        .       A       C       .       PASS    AA=A;DP=120     GT:GQ:DP        1|0:100:28      0|0:92:31       1|0:100:63
+10     4332225 rs10795151      G       A       .       PASS    AA=G;DP=148     GT:GQ:DP        1|0:100:28      0|0:92:33       1|0:100:88
+4      177043176       .       C       T       .       PASS    AA=C;DP=129     GT:GQ:DP        1|0:100:28      0|0:92:35       1|0:100:66
+5      163941231       rs2964311       C       A       .       PASS    AA=c;DP=136     GT:GQ:DP        1|0:100:28      0|0:95:31       1|0:100:76
+7      51684422        .       T       A       .       PASS    AA=T;DP=126     GT:GQ:DP        1|0:100:28      0|0:95:32       1|0:100:66
+2      206534457       rs6735796       C       T       .       PASS    AA=C;DP=140     GT:GQ:DP        1|0:100:28      0|0:98:32       1|0:100:80
+2      8094915 rs17169 G       T       .       PASS    AA=G;DP=143     GT:GQ:DP        1|0:100:28      0|0:98:32       1|0:100:82
+12     92358260        .       C       T       .       PASS    AA=C;DP=139     GT:GQ:DP        1|0:100:28      0|0:98:32       1|0:100:83
+7      141080172       .       G       A       .       PASS    AA=G;DP=150     GT:GQ:DP        1|0:100:28      0|0:98:33       1|0:100:44
+7      34784638        rs324981        A       T       .       PASS    AA=T;DP=94      GT:GQ:DP        1|0:100:28      1|0:100:11      1|1:66:41
+11     61655435        rs1675062       T       C       .       PASS    AA=C;DP=112     GT:GQ:DP        1|0:100:28      1|0:100:15      1|1:100:69
+8      41421216        rs16890568      A       G       .       PASS    AA=G;DP=131     GT:GQ:DP        1|0:100:28      1|0:100:15      1|1:100:87
+4      61534192        .       T       C       .       PASS    AA=T;DP=92      GT:GQ:DP        1|0:100:28      1|0:100:16      1|1:100:48
+6      30092844        rs9261145       C       T       .       PASS    AA=.;DP=103     GT:GQ:DP        1|0:100:28      1|0:100:16      1|1:100:57
+1      214867322       rs12089054      C       T       .       PASS    AA=T;DP=121;HM2;HM3     GT:GQ:DP        1|0:100:28      1|0:100:17      1|1:100:75
+2      229712969       rs6727173       A       G       .       PASS    AA=G;DP=99      GT:GQ:DP        1|0:100:28      1|0:100:18      1|1:100:53
+5      116158430       .       G       A       .       PASS    AA=G;DP=109     GT:GQ:DP        1|0:100:28      1|0:100:18      1|1:100:64
+4      131294304       rs57361902      C       T       .       PASS    AA=T;DP=133     GT:GQ:DP        1|0:100:28      1|0:100:19      1|1:100:44
+12     20639015        rs7967522       A       C       .       PASS    AA=C;DP=94      GT:GQ:DP        1|0:100:28      1|0:100:19      1|1:100:47
+6      135418784       rs2183709       C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        1|0:100:28      1|0:100:20      1|1:100:61
+15     44157971        rs3897951       T       C       .       PASS    AA=T;DP=123     GT:GQ:DP        1|0:100:28      1|0:100:20      1|1:100:73
+3      187352134       rs11927308      T       C       .       PASS    AA=C;DP=131     GT:GQ:DP        1|0:100:28      1|0:100:20      1|1:100:83
+12     90261376        rs7295998       C       G       .       PASS    AA=G;DP=100     GT:GQ:DP        1|0:100:28      1|0:100:21      1|1:100:51
+7      152695319       rs4726285       T       C       .       PASS    AA=C;DP=106     GT:GQ:DP        1|0:100:28      1|0:100:21      1|1:100:58
+6      168069533       .       A       G       .       PASS    AA=A;DP=110     GT:GQ:DP        1|0:100:28      1|0:100:21      1|1:100:60
+6      156546078       rs6922110       C       T       .       PASS    AA=T;DP=119     GT:GQ:DP        1|0:100:28      1|0:100:21      1|1:100:70
+2      38536223        rs12997019      T       C       .       PASS    AA=T;DP=122     GT:GQ:DP        1|0:100:28      1|0:100:21      1|1:100:76
+1      226214823       rs56394518      C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        1|0:100:28      1|0:100:22      1|1:100:71
+1      9187241 rs7539197       C       G       .       PASS    AA=C;DP=119     GT:GQ:DP        1|0:100:28      1|0:100:22      1|1:100:71
+3      131434656       rs9861672       A       G       .       PASS    AA=G;DP=111     GT:GQ:DP        1|0:100:28      1|0:100:23      1|1:100:60
+18     53806485        rs12964725      T       C       .       PASS    AA=C;DP=108     GT:GQ:DP        1|0:100:28      1|0:100:24      1|1:100:43
+22     46499690        rs12170513      C       T       .       PASS    AA=C;DP=116     GT:GQ:DP        1|0:100:28      1|0:100:24      1|1:100:63
+22     31450576        rs725338        G       A       .       PASS    AA=G;DP=118     GT:GQ:DP        1|0:100:28      1|0:100:24      1|1:100:66
+8      56292910        rs7005782       A       G       .       PASS    AA=G;DP=137     GT:GQ:DP        1|0:100:28      1|0:100:24      1|1:87:44
+5      11148652        rs12517839      A       G       .       PASS    AA=G;DP=103     GT:GQ:DP        1|0:100:28      1|0:100:25      1|1:100:36
+4      81559979        rs11099231      C       G       .       PASS    AA=C;DP=111     GT:GQ:DP        1|0:100:28      1|0:100:25      1|1:100:60
+11     74483749        rs55986601      C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        1|0:100:28      1|0:100:25      1|1:100:66
+1      246078429       .       A       G       .       PASS    AA=A;DP=125     GT:GQ:DP        1|0:100:28      1|0:100:25      1|1:100:70
+3      35742410        rs11710519      C       G       .       PASS    AA=C;DP=94      GT:GQ:DP        1|0:100:28      1|0:100:25      1|1:63:29
+5      26769003        .       T       G       .       PASS    AA=T;DP=118     GT:GQ:DP        1|0:100:28      1|0:100:25      1|1:78:66
+7      4633727 rs10259797      C       A       .       PASS    AA=A;DP=103     GT:GQ:DP        1|0:100:28      1|0:100:26      1|1:100:47
+5      163674850       .       C       G       .       PASS    AA=C;DP=111     GT:GQ:DP        1|0:100:28      1|0:100:26      1|1:100:57
+4      162562163       rs59913975      C       G       .       PASS    AA=G;DP=112     GT:GQ:DP        1|0:100:28      1|0:100:26      1|1:100:59
+1      42622990        rs11210628      A       G       .       PASS    AA=A;DP=127;HM2;HM3     GT:GQ:DP        1|0:100:28      1|0:100:26      1|1:100:76
+3      1162033 rs902120        T       C       .       PASS    AA=C;DP=111     GT:GQ:DP        1|0:100:28      1|0:100:27      1|1:100:57
+18     28418012        rs1693310       T       C       .       PASS    AA=C;DP=138     GT:GQ:DP        1|0:100:28      1|0:100:27      1|1:100:88
+14     24227440        rs4982987       C       T       .       PASS    AA=T;DP=123     GT:GQ:DP        1|0:100:28      1|0:100:29      1|1:100:66
+19     33802260        rs10409971      A       T       .       PASS    AA=c;DP=133     GT:GQ:DP        1|0:100:28      1|0:100:30      1|1:100:76
+3      148959568       rs4681374       T       C       .       PASS    AA=T;DP=129     GT:GQ:DP        1|0:100:28      1|0:100:31      1|1:100:69
+21     29911671        rs363437        T       C       .       PASS    AA=T;DP=114     GT:GQ:DP        1|0:100:28      1|0:100:33      1|1:100:53
+1      190788214       rs10801129      G       T       .       PASS    AA=T;DP=117;HM2 GT:GQ:DP        1|0:100:28      1|0:100:35      1|1:100:56
+2      6446974 rs6719248       C       G       .       PASS    AA=C;DP=129     GT:GQ:DP        1|0:100:28      1|0:100:35      1|1:100:69
+4      167920477       rs2054146       T       C       .       PASS    AA=t;DP=115     GT:GQ:DP        1|0:100:28      1|0:100:36      1|1:100:50
+7      1297580 rs11764449      A       T       .       PASS    AA=A;DP=94      GT:GQ:DP        1|0:100:28      1|0:19:12       1|1:100:44
+20     59196784        rs6028061       A       T       .       PASS    AA=A;DP=97      GT:GQ:DP        1|0:100:28      1|0:24:10       1|1:100:59
+6      77862781        rs9341634       C       A       .       PASS    AA=c;DP=93      GT:GQ:DP        1|0:100:28      1|0:38:17       1|1:95:47
+2      52941916        rs1451459       G       A       .       PASS    AA=G;DP=103     GT:GQ:DP        1|0:100:28      1|0:42:18       1|1:100:59
+19     1831586 rs4807159       A       C       .       PASS    AA=C;DP=110     GT:GQ:DP        1|0:100:28      1|0:45:12       1|1:100:70
+2      41274810        rs58882980      A       G       .       PASS    AA=A;DP=109     GT:GQ:DP        1|0:100:28      1|0:52:22       1|1:100:62
+4      108598104       rs7437348       G       A       .       PASS    AA=G;DP=112     GT:GQ:DP        1|0:100:28      1|0:54:21       1|1:100:62
+19     10030278        rs4552116       T       G       .       PASS    AA=t;DP=119     GT:GQ:DP        1|0:100:28      1|0:59:17       1|1:100:74
+9      137370163       rs914411        A       G       .       PASS    AA=A;DP=95      GT:GQ:DP        1|0:100:28      1|0:67:10       1|1:100:48
+16     88356702        rs9806894       G       C       .       PASS    AA=G;DP=87      GT:GQ:DP        1|0:100:28      1|0:67:18       1|1:93:32
+16     9167191 rs2941346       A       G       .       PASS    AA=N;DP=117     GT:GQ:DP        1|0:100:28      1|0:68:18       1|1:100:70
+3      24513990        rs13318377      C       T       .       PASS    AA=C;DP=117     GT:GQ:DP        1|0:100:28      1|0:68:20       1|1:100:69
+21     30719111        rs7282562       A       G       .       PASS    AA=a;DP=86      GT:GQ:DP        1|0:100:28      1|0:6:19        1|1:88:30
+1      11730346        rs17875947      C       T       .       PASS    AA=C;DP=98      GT:GQ:DP        1|0:100:28      1|0:71:11       1|1:100:60
+2      38298632        rs12622754      A       C       .       PASS    AA=N;DP=97      GT:GQ:DP        1|0:100:28      1|0:72:12       1|1:100:58
+2      165463229       .       T       C       .       PASS    AA=T;DP=109     GT:GQ:DP        1|0:100:28      1|0:73:18       1|1:100:62
+15     48303536        rs2414041       C       T       .       PASS    AA=T;DP=124     GT:GQ:DP        1|0:100:28      1|0:79:29       1|1:100:70
+12     31024310        rs11051195      C       T       .       PASS    AA=C;DP=121     GT:GQ:DP        1|0:100:28      1|0:80:13       1|1:100:82
+17     72140082        .       G       A       .       PASS    AA=G;DP=127     GT:GQ:DP        1|0:100:28      1|0:84:15       1|1:100:83
+12     124225520       rs34019704      C       G       .       PASS    AA=G;DP=135     GT:GQ:DP        1|0:100:28      1|0:87:18       1|1:100:89
+5      151496845       rs29822 T       C       .       PASS    AA=C;DP=114     GT:GQ:DP        1|0:100:28      1|0:89:22       1|1:100:59
+17     5774476 rs8072611       A       T       .       PASS    AA=N;DP=103     GT:GQ:DP        1|0:100:28      1|0:89:23       1|1:14:51
+1      231908635       rs596623        A       G       .       PASS    AA=G;DP=117;HM2 GT:GQ:DP        1|0:100:28      1|0:90:21       1|1:100:67
+9      8381941 rs10815848      C       T       .       PASS    AA=T;DP=140     GT:GQ:DP        1|0:100:28      1|0:90:31       1|1:100:80
+3      62911228        rs12498011      G       A       .       PASS    AA=G;DP=111     GT:GQ:DP        1|0:100:28      1|0:91:19       1|1:100:63
+9      4101952 rs12555606      A       G       .       PASS    AA=G;DP=67      GT:GQ:DP        1|0:100:28      1|0:91:22       1|1:36:13
+5      122464873       .       T       G       .       PASS    AA=T;DP=93      GT:GQ:DP        1|0:100:28      1|0:92:11       1|1:100:52
+12     2172946 rs11838047      G       A       .       PASS    AA=G;DP=130     GT:GQ:DP        1|0:100:28      1|0:92:26       1|1:100:75
+11     120207246       .       G       T       .       PASS    AA=G;DP=106     GT:GQ:DP        1|0:100:28      1|0:93:20       1|1:100:45
+2      236533525       .       G       T       .       PASS    AA=G;DP=85      GT:GQ:DP        1|0:100:28      1|0:94:19       1|1:90:32
+2      47053849        rs1122516       G       C       .       PASS    AA=C;DP=103     GT:GQ:DP        1|0:100:28      1|0:97:18       1|1:100:54
+6      162158508       rs3019438       T       C       .       PASS    AA=T;DP=106     GT:GQ:DP        1|0:100:28      1|0:98:12       1|1:100:68
+3      10143967        rs3894323       G       A       .       PASS    AA=G;DP=86      GT:GQ:DP        1|0:100:28      1|0:98:15       1|1:67:31
+6      38026541        rs2453882       C       G       .       PASS    AA=G;DP=109     GT:GQ:DP        1|0:100:28      1|0:9:16        1|1:100:67
+16     7200145 rs1922591       G       A       .       PASS    AA=A;DP=126     GT:GQ:DP        1|0:100:28      1|1:100:36      1|1:100:59
+2      52153140        rs11899118      T       C       .       PASS    AA=T;DP=118     GT:GQ:DP        1|0:100:28      1|1:11:26       1|1:100:64
+10     132475042       rs11818024      C       G       .       PASS    AA=G;DP=108     GT:GQ:DP        1|0:100:28      1|1:13:15       1|1:100:63
+8      52719885        rs61006212      A       C       .       PASS    AA=A;DP=92      GT:GQ:DP        1|0:100:28      1|1:13:17       1|1:54:38
+15     80332269        rs4344697       A       T       .       PASS    AA=T;DP=95      GT:GQ:DP        1|0:100:28      1|1:17:20       1|1:73:48
+10     99429678        rs2151930       A       G       .       PASS    AA=A;DP=122     GT:GQ:DP        1|0:100:28      1|1:20:13       1|1:100:80
+20     54015733        rs878428        T       G       .       PASS    AA=T;DP=102     GT:GQ:DP        1|0:100:28      1|1:20:21       1|1:100:54
+2      208300502       rs4675703       T       G       .       PASS    AA=G;DP=101     GT:GQ:DP        1|0:100:28      1|1:21:18       1|1:100:56
+10     126046529       rs2361610       G       A       .       PASS    AA=G;DP=126     GT:GQ:DP        1|0:100:28      1|1:23:13       1|1:100:87
+15     43736026        rs694929        T       C       .       PASS    AA=C;DP=102     GT:GQ:DP        1|0:100:28      1|1:29:23       1|1:90:42
+20     3726433 rs3746644       T       C       .       PASS    AA=C;DP=90      GT:GQ:DP        1|0:100:28      1|1:30:10       1|1:100:52
+11     104114938       rs1147030       G       T       .       PASS    AA=G;DP=114     GT:GQ:DP        1|0:100:28      1|1:31:18       1|1:100:71
+12     101368366       rs10735380      G       A       .       PASS    AA=g;DP=102     GT:GQ:DP        1|0:100:28      1|1:33:11       1|1:100:64
+14     55873517        rs17091300      C       T       .       PASS    AA=T;DP=101     GT:GQ:DP        1|0:100:28      1|1:36:12       1|1:100:62
+17     31425281        rs854474        A       G       .       PASS    AA=G;DP=91      GT:GQ:DP        1|0:100:28      1|1:36:13       1|1:100:41
+15     24653293        rs7496866       T       G       .       PASS    AA=T;DP=119     GT:GQ:DP        1|0:100:28      1|1:38:24       1|1:100:67
+2      146868655       rs12691739      C       T       .       PASS    AA=C;DP=101     GT:GQ:DP        1|0:100:28      1|1:39:13       1|1:100:63
+13     94977401        rs9525008       G       A       .       PASS    AA=A;DP=83      GT:GQ:DP        1|0:100:28      1|1:39:14       1|1:72:41
+5      151284953       rs2071220       C       T       .       PASS    AA=T;DP=117     GT:GQ:DP        1|0:100:28      1|1:39:15       1|1:100:72
+3      34832751        .       G       A       .       PASS    AA=G;DP=102     GT:GQ:DP        1|0:100:28      1|1:39:22       1|1:100:53
+12     25908522        rs706510        G       T       .       PASS    AA=T;DP=94      GT:GQ:DP        1|0:100:28      1|1:41:32       1|1:84:29
+4      35924580        rs13116539      T       G       .       PASS    AA=G;DP=94      GT:GQ:DP        1|0:100:28      1|1:42:14       1|1:100:51
+15     41337873        rs573169        C       T       .       PASS    AA=C;DP=96      GT:GQ:DP        1|0:100:28      1|1:42:14       1|1:100:54
+17     77517721        rs3826555       C       T       .       PASS    AA=c;DP=123     GT:GQ:DP        1|0:100:28      1|1:42:14       1|1:100:84
+6      163633273       rs7768540       G       A       .       PASS    AA=A;DP=98      GT:GQ:DP        1|0:100:28      1|1:42:15       1|1:100:55
+3      60424049        rs2594239       C       G       .       PASS    AA=G;DP=103     GT:GQ:DP        1|0:100:28      1|1:42:15       1|1:100:59
+12     30431765        rs7132701       C       T       .       PASS    AA=C;DP=124     GT:GQ:DP        1|0:100:28      1|1:44:26       1|1:100:69
+15     68682001        rs7173630       A       G       .       PASS    AA=A;DP=124     GT:GQ:DP        1|0:100:28      1|1:45:15       1|1:100:72
+7      24006948        rs6947634       C       G       .       PASS    AA=G;DP=125     GT:GQ:DP        1|0:100:28      1|1:45:20       1|1:100:38
+5      172103875       rs6862893       G       A       .       PASS    AA=G;DP=106     GT:GQ:DP        1|0:100:28      1|1:48:16       1|1:100:52
+17     50717099        rs884206        G       T       .       PASS    AA=G;DP=122     GT:GQ:DP        1|0:100:28      1|1:50:28       1|1:100:65
+12     83372684        rs10862864      G       C       .       PASS    AA=C;DP=105     GT:GQ:DP        1|0:100:28      1|1:51:19       1|1:100:54
+18     64661900        rs9962491       C       T       .       PASS    AA=C;DP=89      GT:GQ:DP        1|0:100:28      1|1:54:19       1|1:100:42
+2      63481187        rs2176414       G       A       .       PASS    AA=A;DP=103     GT:GQ:DP        1|0:100:28      1|1:54:19       1|1:100:49
+20     43386291        rs6073708       A       G       .       PASS    AA=G;DP=117     GT:GQ:DP        1|0:100:28      1|1:54:19       1|1:100:67
+12     67510330        rs3730614       C       T       .       PASS    AA=C;DP=94      GT:GQ:DP        1|0:100:28      1|1:54:19       1|1:86:48
+3      44244166        rs4682731       C       G       .       PASS    AA=C;DP=124     GT:GQ:DP        1|0:100:28      1|1:54:22       1|1:100:75
+4      38051932        rs11722631      A       C       .       PASS    AA=C;DP=136     GT:GQ:DP        1|0:100:28      1|1:54:28       1|1:100:80
+12     128773018       rs935834        A       G       .       PASS    AA=A;DP=104     GT:GQ:DP        1|0:100:28      1|1:57:20       1|1:100:53
+12     129337798       rs1874520       A       G       .       PASS    AA=A;DP=119     GT:GQ:DP        1|0:100:28      1|1:57:20       1|1:100:73
+1      244134615       rs12088190      A       G       .       PASS    AA=A;DP=125     GT:GQ:DP        1|0:100:28      1|1:57:20       1|1:100:76
+8      93932991        rs10095035      G       C       .       PASS    AA=C;DP=94      GT:GQ:DP        1|0:100:28      1|1:57:20       1|1:98:44
+16     75300810        rs9921190       G       A       .       PASS    AA=A;DP=92      GT:GQ:DP        1|0:100:28      1|1:57:21       1|1:100:35
+7      142924923       rs2949763       C       T       .       PASS    AA=C;DP=129     GT:GQ:DP        1|0:100:28      1|1:58:24       1|1:100:74
+4      36578731        rs1816867       G       A       .       PASS    AA=G;DP=120     GT:GQ:DP        1|0:100:28      1|1:58:25       1|1:100:65
+8      3847129 rs2554672       C       T       .       PASS    AA=T;DP=107     GT:GQ:DP        1|0:100:28      1|1:60:20       1|1:100:59
+9      92607943        rs62554850      G       T       .       PASS    AA=T;DP=113     GT:GQ:DP        1|0:100:28      1|1:60:20       1|1:100:66
+7      19905757        rs13241328      G       A       .       PASS    AA=G;DP=120     GT:GQ:DP        1|0:100:28      1|1:60:20       1|1:100:72
+11     24360196        rs11027857      G       A       .       PASS    AA=g;DP=118     GT:GQ:DP        1|0:100:28      1|1:60:21       1|1:100:68
+20     15084468        rs799170        A       G       .       PASS    AA=A;DP=116     GT:GQ:DP        1|0:100:28      1|1:60:22       1|1:100:68
+1      33718178        rs10798956      G       T       .       PASS    AA=G;DP=127;HM2;HM3     GT:GQ:DP        1|0:100:28      1|1:61:32       1|1:100:67
+3      30862528        rs13076200      T       C       .       PASS    AA=T;DP=114     GT:GQ:DP        1|0:100:28      1|1:63:22       1|1:100:67
+6      36616014        rs6913714       G       T       .       PASS    AA=T;DP=123     GT:GQ:DP        1|0:100:28      1|1:63:22       1|1:100:76
+2      176954764       rs12162387      G       A       .       PASS    AA=A;DP=135     GT:GQ:DP        1|0:100:28      1|1:63:23       1|1:100:79
+18     24919668        rs10502525      G       A       .       PASS    AA=G;DP=126     GT:GQ:DP        1|0:100:28      1|1:63:27       1|1:100:73
+10     88199391        rs7089534       T       C       .       PASS    AA=T;DP=93      GT:GQ:DP        1|0:100:28      1|1:66:22       1|1:100:35
+3      121503245       rs9851825       G       A       .       PASS    AA=A;DP=90      GT:GQ:DP        1|0:100:28      1|1:66:22       1|1:100:39
+6      48706158        rs2996252       C       T       .       PASS    AA=T;DP=108     GT:GQ:DP        1|0:100:28      1|1:66:22       1|1:100:56
+3      180948332       rs13097298      G       C       .       PASS    AA=C;DP=116     GT:GQ:DP        1|0:100:28      1|1:66:22       1|1:100:68
+7      45562989        rs6953291       A       G       .       PASS    AA=a;DP=108     GT:GQ:DP        1|0:100:28      1|1:69:23       1|1:100:56
+4      76019971        rs1349630       C       T       .       PASS    AA=T;DP=124     GT:GQ:DP        1|0:100:28      1|1:69:23       1|1:100:74
+5      7220383 rs12188646      C       T       .       PASS    AA=.;DP=117     GT:GQ:DP        1|0:100:28      1|1:69:24       1|1:100:66
+3      115544580       rs12491518      C       T       .       PASS    AA=C;DP=123     GT:GQ:DP        1|0:100:28      1|1:69:26       1|1:100:71
+15     93115875        rs8038064       C       A       .       PASS    AA=A;DP=116     GT:GQ:DP        1|0:100:28      1|1:72:24       1|1:100:65
+3      62029636        rs1396274       A       C       .       PASS    AA=A;DP=128     GT:GQ:DP        1|0:100:28      1|1:72:24       1|1:100:80
+14     86722208        rs1756694       G       A       .       PASS    AA=A;DP=123     GT:GQ:DP        1|0:100:28      1|1:72:25       1|1:100:69
+10     100894723       rs1986449       T       C       .       PASS    AA=C;DP=115     GT:GQ:DP        1|0:100:28      1|1:75:28       1|1:100:59
+2      209558751       rs16842207      C       T       .       PASS    AA=c;DP=98      GT:GQ:DP        1|0:100:28      1|1:78:26       1|1:100:44
+11     91275551        .       T       C       .       PASS    AA=T;DP=140     GT:GQ:DP        1|0:100:28      1|1:78:26       1|1:100:85
+16     24072920        rs409556        G       A       .       PASS    AA=A;DP=140     GT:GQ:DP        1|0:100:28      1|1:81:27       1|1:100:86
+9      98573399        rs57817846      C       A       .       PASS    AA=C;DP=129     GT:GQ:DP        1|0:100:28      1|1:81:28       1|1:100:69
+3      117250627       rs9289039       C       G       .       PASS    AA=G;DP=123     GT:GQ:DP        1|0:100:28      1|1:84:28       1|1:100:66
+3      27306858        rs543882        T       C       .       PASS    AA=T;DP=124     GT:GQ:DP        1|0:100:28      1|1:84:29       1|1:100:51
+2      33930854        rs1718732       A       T       .       PASS    AA=T;DP=113     GT:GQ:DP        1|0:100:28      1|1:90:30       1|1:100:55
+13     88077981        rs8000777       C       A       .       PASS    AA=C;DP=135     GT:GQ:DP        1|0:100:28      1|1:93:32       1|1:100:63
+3      145652258       rs2569959       C       T       .       PASS    AA=C;DP=126     GT:GQ:DP        1|0:100:28      1|1:99:35       1|1:100:64
+20     55706824        rs58258625      C       T       .       PASS    AA=C;DP=134     GT:GQ:DP        1|0:100:29      0|0:100:33      1|0:100:32
+19     61675742        rs10413986      A       G       .       PASS    AA=A;DP=134     GT:GQ:DP        1|0:100:29      0|0:100:33      1|0:100:72
+1      219799608       .       A       C       .       PASS    AA=A;DP=151     GT:GQ:DP        1|0:100:29      0|0:100:33      1|0:100:90
+3      96311874        rs58445898      C       A       .       PASS    AA=c;DP=118     GT:GQ:DP        1|0:100:29      0|0:100:34      1|0:100:55
+8      78213199        rs10093959      G       A       .       PASS    AA=G;DP=120     GT:GQ:DP        1|0:100:29      0|0:100:34      1|0:100:56
+7      133477031       .       A       G       .       PASS    AA=A;DP=120     GT:GQ:DP        1|0:100:29      0|0:100:34      1|0:100:57
+11     21922989        rs12288432      C       T       .       PASS    AA=C;DP=135     GT:GQ:DP        1|0:100:29      0|0:100:35      1|0:100:71
+14     44461659        .       T       C       .       PASS    AA=T;DP=120     GT:GQ:DP        1|0:100:29      0|0:100:37      1|0:100:55
+6      73392846        rs17692055      T       G       .       PASS    AA=T;DP=167     GT:GQ:DP        1|0:100:29      0|0:100:39      1|0:100:44
+20     12855179        rs3891283       C       A       .       PASS    AA=A;DP=116     GT:GQ:DP        1|0:100:29      0|0:14:21       1|0:100:66
+13     20207266        rs58937454      G       A       .       PASS    AA=G;DP=103     GT:GQ:DP        1|0:100:29      0|0:18:13       1|0:100:60
+1      180618142       rs16858921      C       A       .       PASS    AA=C;DP=111;HM2;HM3     GT:GQ:DP        1|0:100:29      0|0:24:18       1|0:100:65
+3      183072748       .       A       C       .       PASS    AA=C;DP=96      GT:GQ:DP        1|0:100:29      0|0:28:14       1|0:100:53
+2      65447699        rs58522699      C       T       .       PASS    AA=C;DP=119     GT:GQ:DP        1|0:100:29      0|0:29:20       1|0:100:70
+15     79259330        .       G       A       .       PASS    AA=A;DP=136     GT:GQ:DP        1|0:100:29      0|0:29:20       1|0:100:89
+3      124480330       rs9870120       G       A       .       PASS    AA=A;DP=98      GT:GQ:DP        1|0:100:29      0|0:29:9        1|0:100:52
+14     106069264       rs28600981      C       T       .       PASS    AA=-;DP=116     GT:GQ:DP        1|0:100:29      0|0:29:9        1|0:100:76
+17     69850073        .       G       A       .       PASS    AA=G;DP=95      GT:GQ:DP        1|0:100:29      0|0:32:10       1|0:100:45
+12     126473288       rs58152951      A       G       .       PASS    AA=A;DP=94      GT:GQ:DP        1|0:100:29      0|0:32:10       1|0:100:58
+10     116822072       .       G       A       .       PASS    AA=G;DP=96      GT:GQ:DP        1|0:100:29      0|0:32:10       1|0:100:60
+5      134807294       .       T       G       .       PASS    AA=T;DP=107     GT:GQ:DP        1|0:100:29      0|0:32:21       1|0:100:54
+12     113878649       .       T       C       .       PASS    AA=T;DP=95      GT:GQ:DP        1|0:100:29      0|0:34:16       1|0:100:38
+4      189372929       rs12507596      G       A       .       PASS    AA=A;DP=92      GT:GQ:DP        1|0:100:29      0|0:34:18       1|0:100:44
+17     14807071        rs62058734      C       T       .       PASS    AA=C;DP=130     GT:GQ:DP        1|0:100:29      0|0:35:26       1|0:100:76
+8      112498184       rs59040937      T       A       .       PASS    AA=T;DP=78      GT:GQ:DP        1|0:100:29      0|0:38:12       1|0:100:37
+14     95918001        rs7147936       T       C       .       PASS    AA=T;DP=83      GT:GQ:DP        1|0:100:29      0|0:38:12       1|0:100:42
+10     69735787        rs10823175      G       A       .       PASS    AA=A;DP=92      GT:GQ:DP        1|0:100:29      0|0:38:12       1|0:100:51
+4      66811971        rs35827885      G       T       .       PASS    AA=T;DP=107     GT:GQ:DP        1|0:100:29      0|0:38:13       1|0:100:67
+6      84522960        rs58439840      C       A       .       PASS    AA=C;DP=95      GT:GQ:DP        1|0:100:29      0|0:38:23       1|0:100:42
+17     51838559        rs8072623       T       G       .       PASS    AA=T;DP=116     GT:GQ:DP        1|0:100:29      0|0:38:23       1|0:100:66
+13     66813474        rs2991424       G       T       .       PASS    AA=G;DP=123     GT:GQ:DP        1|0:100:29      0|0:39:19       1|0:100:75
+4      182634064       .       G       C       .       PASS    AA=G;DP=69      GT:GQ:DP        1|0:100:29      0|0:41:13       1|0:100:22
+16     88240016        rs57359584      C       G       .       PASS    AA=C;DP=99      GT:GQ:DP        1|0:100:29      0|0:41:13       1|0:100:57
+11     116894727       rs3819210       A       G       .       PASS    AA=A;DP=95      GT:GQ:DP        1|0:100:29      0|0:41:14       1|0:100:53
+8      42255685        rs11990404      G       C       .       PASS    AA=G;DP=125     GT:GQ:DP        1|0:100:29      0|0:41:15       1|0:100:80
+12     74405409        rs11180657      A       C       .       PASS    AA=A;DP=100     GT:GQ:DP        1|0:100:29      0|0:41:15       1|0:92:56
+14     61267217        rs2301108       A       G       .       PASS    AA=G;DP=100     GT:GQ:DP        1|0:100:29      0|0:42:20       1|0:100:51
+16     64538459        .       T       A       .       PASS    AA=T;DP=121     GT:GQ:DP        1|0:100:29      0|0:43:18       1|0:100:72
+8      19233826        rs7832867       T       G       .       PASS    AA=G;DP=88      GT:GQ:DP        1|0:100:29      0|0:44:14       1|0:100:37
+6      157198259       rs9372017       A       G       .       PASS    AA=A;DP=93      GT:GQ:DP        1|0:100:29      0|0:44:14       1|0:100:49
+20     42177239        rs7267523       C       T       .       PASS    AA=T;DP=148     GT:GQ:DP        1|0:100:29      0|0:44:14       1|0:100:59
+3      192821168       rs59555905      A       G       .       PASS    AA=A;DP=108     GT:GQ:DP        1|0:100:29      0|0:44:14       1|0:100:63
+11     8221864 .       A       G       .       PASS    AA=A;DP=111     GT:GQ:DP        1|0:100:29      0|0:44:14       1|0:100:68
+8      23407704        rs1010848       T       G       .       PASS    AA=G;DP=120     GT:GQ:DP        1|0:100:29      0|0:44:14       1|0:100:78
+9      109274788       rs57341345      C       T       .       PASS    AA=C;DP=123     GT:GQ:DP        1|0:100:29      0|0:44:14       1|0:100:80
+6      67292449        rs2175769       T       A       .       PASS    AA=T;DP=66      GT:GQ:DP        1|0:100:29      0|0:44:15       1|0:100:18
+5      124571301       rs7705031       G       T       .       PASS    AA=G;DP=94      GT:GQ:DP        1|0:100:29      0|0:44:15       1|0:100:52
+5      21697022        rs565705        A       T       .       PASS    AA=A;DP=94      GT:GQ:DP        1|0:100:29      0|0:46:26       1|0:100:40
+12     25200210        rs58915146      G       C       .       PASS    AA=G;DP=117     GT:GQ:DP        1|0:100:29      0|0:46:26       1|0:100:63
+9      132241055       rs60742961      G       T       .       PASS    AA=G;DP=86      GT:GQ:DP        1|0:100:29      0|0:47:15       1|0:100:32
+9      4715380 rs12377935      T       C       .       PASS    AA=T;DP=104     GT:GQ:DP        1|0:100:29      0|0:47:15       1|0:100:61
+20     45788034        .       G       C       .       PASS    AA=A;DP=108     GT:GQ:DP        1|0:100:29      0|0:47:15       1|0:100:62
+20     2068271 rs55904687      G       T       .       PASS    AA=T;DP=107     GT:GQ:DP        1|0:100:29      0|0:47:15       1|0:100:66
+11     90297582        rs1917516       G       A       .       PASS    AA=A;DP=112     GT:GQ:DP        1|0:100:29      0|0:47:15       1|0:100:68
+3      174498668       rs1818049       C       G       .       PASS    AA=C;DP=116     GT:GQ:DP        1|0:100:29      0|0:47:15       1|0:100:72
+16     85846033        .       G       A       .       PASS    AA=G;DP=117     GT:GQ:DP        1|0:100:29      0|0:47:15       1|0:100:75
+9      94926929        rs13299270      C       T       .       PASS    AA=C;DP=96      GT:GQ:DP        1|0:100:29      0|0:47:16       1|0:100:39
+4      133681298       rs1499344       C       T       .       PASS    AA=C;DP=118     GT:GQ:DP        1|0:100:29      0|0:47:16       1|0:100:73
+18     3960007 rs7241219       T       C       .       PASS    AA=t;DP=133     GT:GQ:DP        1|0:100:29      0|0:47:16       1|0:100:86
+7      14049239        rs55894166      G       A       .       PASS    AA=G;DP=95      GT:GQ:DP        1|0:100:29      0|0:47:17       1|0:100:47
+12     131439733       rs28694027      T       C       .       PASS    AA=C;DP=91      GT:GQ:DP        1|0:100:29      0|0:47:18       1|0:100:39
+10     112858813       .       G       A       .       PASS    AA=G;DP=115     GT:GQ:DP        1|0:100:29      0|0:47:19       1|0:100:67
+14     100340179       .       C       G       .       PASS    AA=g;DP=106     GT:GQ:DP        1|0:100:29      0|0:48:18       1|0:100:59
+3      68621914        rs1605980       C       A       .       PASS    AA=C;DP=132     GT:GQ:DP        1|0:100:29      0|0:48:21       1|0:100:70
+19     50646852        .       A       G       .       PASS    AA=A;DP=156     GT:GQ:DP        1|0:100:29      0|0:49:27       1|0:100:55
+7      74896316        rs6969582       A       C       .       PASS    AA=A;DP=121     GT:GQ:DP        1|0:100:29      0|0:49:27       1|0:100:64
+3      7529891 rs6788575       G       A       .       PASS    AA=G;DP=125     GT:GQ:DP        1|0:100:29      0|0:49:27       1|0:100:71
+11     79713343        .       T       C       .       PASS    AA=T;DP=143     GT:GQ:DP        1|0:100:29      0|0:49:31       1|0:100:83
+4      17140326        .       G       A       .       PASS    AA=G;DP=148     GT:GQ:DP        1|0:100:29      0|0:50:16       1|0:100:102
+15     39116348        rs2925348       A       G       .       PASS    AA=G;DP=100     GT:GQ:DP        1|0:100:29      0|0:50:17       1|0:100:55
+22     37942189        .       G       A       .       PASS    AA=G;DP=130     GT:GQ:DP        1|0:100:29      0|0:50:22       1|0:100:81
+2      122663676       rs7568842       A       G       .       PASS    AA=A;DP=143     GT:GQ:DP        1|0:100:29      0|0:51:23       1|0:100:80
+20     33172733        .       G       C       .       PASS    AA=G;DP=131     GT:GQ:DP        1|0:100:29      0|0:52:23       1|0:100:81
+9      107020546       .       T       A       .       PASS    AA=t;DP=101     GT:GQ:DP        1|0:100:29      0|0:53:17       1|0:100:42
+9      139291067       rs59336554      C       T       .       PASS    AA=C;DP=105     GT:GQ:DP        1|0:100:29      0|0:53:17       1|0:100:57
+9      112674098       .       T       C       .       PASS    AA=T;DP=106     GT:GQ:DP        1|0:100:29      0|0:53:17       1|0:100:58
+2      11952381        .       T       C       .       PASS    AA=T;DP=108     GT:GQ:DP        1|0:100:29      0|0:53:17       1|0:100:63
+14     41643812        .       T       C       .       PASS    AA=T;DP=120     GT:GQ:DP        1|0:100:29      0|0:53:17       1|0:100:75
+9      33050416        rs1537041       C       T       .       PASS    AA=T;DP=125     GT:GQ:DP        1|0:100:29      0|0:53:17       1|0:100:79
+4      31603661        rs11726651      G       A       .       PASS    AA=G;DP=99      GT:GQ:DP        1|0:100:29      0|0:53:19       1|0:100:52
+17     35737481        .       C       T       .       PASS    AA=C;DP=132     GT:GQ:DP        1|0:100:29      0|0:53:19       1|0:100:69
+20     52700983        rs2840  G       A       .       PASS    AA=g;DP=95      GT:GQ:DP        1|0:100:29      0|0:53:20       1|0:100:36
+3      41629155        rs7637587       C       T       .       PASS    AA=C;DP=119     GT:GQ:DP        1|0:100:29      0|0:53:23       1|0:100:66
+2      163032269       rs13398374      C       T       .       PASS    AA=C;DP=117     GT:GQ:DP        1|0:100:29      0|0:53:26       1|0:100:49
+8      59384785        rs58076547      C       A       .       PASS    AA=C;DP=149     GT:GQ:DP        1|0:100:29      0|0:55:29       1|0:100:44
+3      120700004       rs58398719      T       C       .       PASS    AA=T;DP=102     GT:GQ:DP        1|0:100:29      0|0:56:18       1|0:100:41
+22     47981443        rs2688114       C       G       .       PASS    AA=C;DP=116     GT:GQ:DP        1|0:100:29      0|0:56:18       1|0:100:69
+7      46866548        rs10248692      A       G       .       PASS    AA=A;DP=118     GT:GQ:DP        1|0:100:29      0|0:56:18       1|0:100:74
+10     11368856        rs11257047      T       A       .       PASS    AA=T;DP=121     GT:GQ:DP        1|0:100:29      0|0:56:18       1|0:100:76
+1      157014116       rs857835        A       G       .       PASS    AA=A;DP=121;HM2;HM3     GT:GQ:DP        1|0:100:29      0|0:56:18       1|0:100:77
+8      2951877 .       T       G       .       PASS    AA=T;DP=116     GT:GQ:DP        1|0:100:29      0|0:56:19       1|0:100:66
+2      115424700       rs34710947      A       G       .       PASS    AA=A;DP=118     GT:GQ:DP        1|0:100:29      0|0:56:19       1|0:100:71
+17     73086846        .       G       A       .       PASS    AA=G;DP=109     GT:GQ:DP        1|0:100:29      0|0:56:20       1|0:100:59
+4      190387044       rs11132626      G       A       .       PASS    AA=G;DP=119     GT:GQ:DP        1|0:100:29      0|0:56:20       1|0:100:71
+7      108083039       .       T       G       .       PASS    AA=t;DP=132     GT:GQ:DP        1|0:100:29      0|0:56:20       1|0:100:84
+12     32665960        rs60066916      C       A       .       PASS    AA=C;DP=108     GT:GQ:DP        1|0:100:29      0|0:57:21       1|0:100:57
+10     134984559       rs7893498       G       T       .       PASS    AA=g;DP=87      GT:GQ:DP        1|0:100:29      0|0:59:19       1|0:100:26
+5      166324888       .       C       T       .       PASS    AA=T;DP=125     GT:GQ:DP        1|0:100:29      0|0:59:19       1|0:100:37
+12     100005617       .       A       C       .       PASS    AA=A;DP=138     GT:GQ:DP        1|0:100:29      0|0:59:19       1|0:100:49
+20     60943383        .       T       A       .       PASS    AA=T;DP=99      GT:GQ:DP        1|0:100:29      0|0:59:19       1|0:100:51
+11     19742425        .       T       C       .       PASS    AA=t;DP=110     GT:GQ:DP        1|0:100:29      0|0:59:19       1|0:100:61
+3      149567277       rs6765406       A       G       .       PASS    AA=A;DP=117     GT:GQ:DP        1|0:100:29      0|0:59:19       1|0:100:68
+8      89709821        rs4961102       T       C       .       PASS    AA=T;DP=119     GT:GQ:DP        1|0:100:29      0|0:59:19       1|0:100:71
+5      101335350       rs17144821      C       T       .       PASS    AA=C;DP=119     GT:GQ:DP        1|0:100:29      0|0:59:19       1|0:100:73
+12     126611303       rs10744316      C       A       .       PASS    AA=C;DP=123     GT:GQ:DP        1|0:100:29      0|0:59:19       1|0:100:74
+20     14122339        .       T       A       .       PASS    AA=t;DP=124     GT:GQ:DP        1|0:100:29      0|0:59:19       1|0:100:76
+7      90005132        rs13241288      T       A       .       PASS    AA=A;DP=110     GT:GQ:DP        1|0:100:29      0|0:59:20       1|0:100:62
+2      180266657       rs57028984      A       G       .       PASS    AA=A;DP=117     GT:GQ:DP        1|0:100:29      0|0:59:20       1|0:100:66
+7      51792543        .       C       T       .       PASS    AA=C;DP=123     GT:GQ:DP        1|0:100:29      0|0:59:21       1|0:100:72
+5      100368902       rs13358219      C       T       .       PASS    AA=C;DP=130     GT:GQ:DP        1|0:100:29      0|0:59:21       1|0:100:80
+9      70515994        rs10869224      C       G       .       PASS    AA=C;DP=104     GT:GQ:DP        1|0:100:29      0|0:62:20       1|0:100:53
+5      113094464       rs6894507       G       T       .       PASS    AA=G;DP=115     GT:GQ:DP        1|0:100:29      0|0:62:20       1|0:100:56
+8      27079630        rs59153059      A       G       .       PASS    AA=A;DP=107     GT:GQ:DP        1|0:100:29      0|0:62:20       1|0:100:57
+7      80893942        rs2967917       T       C       .       PASS    AA=C;DP=107     GT:GQ:DP        1|0:100:29      0|0:62:20       1|0:100:58
+5      12730428        rs57761512      T       C       .       PASS    AA=t;DP=110     GT:GQ:DP        1|0:100:29      0|0:62:20       1|0:100:62
+17     46250155        rs9895866       T       C       .       PASS    AA=C;DP=114     GT:GQ:DP        1|0:100:29      0|0:62:20       1|0:100:68
+12     117400608       rs61944719      C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        1|0:100:29      0|0:62:20       1|0:100:70
+4      62507156        rs17292114      T       C       .       PASS    AA=T;DP=128     GT:GQ:DP        1|0:100:29      0|0:62:20       1|0:100:81
+13     109913468       rs9521786       G       A       .       PASS    AA=G;DP=135     GT:GQ:DP        1|0:100:29      0|0:62:20       1|0:100:82
+10     4408601 .       G       A       .       PASS    AA=G;DP=118     GT:GQ:DP        1|0:100:29      0|0:62:21       1|0:100:68
+3      2977551 .       G       A       .       PASS    AA=A;DP=116     GT:GQ:DP        1|0:100:29      0|0:62:22       1|0:100:67
+1      206155307       rs61601393      C       G       .       PASS    AA=C;DP=118     GT:GQ:DP        1|0:100:29      0|0:62:22       1|0:100:69
+17     12988438        rs7210118       C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        1|0:100:29      0|0:62:23       1|0:100:56
+15     55634286        .       G       A       .       PASS    AA=G;DP=133     GT:GQ:DP        1|0:100:29      0|0:62:23       1|0:100:82
+15     97091648        .       C       T       .       PASS    AA=C;DP=109     GT:GQ:DP        1|0:100:29      0|0:63:25       1|0:100:57
+1      4058815 rs10915428      G       T       .       PASS    AA=T;DP=110;HM2;HM3     GT:GQ:DP        1|0:100:29      0|0:63:25       1|0:100:58
+21     33312501        .       A       C       .       PASS    AA=C;DP=132     GT:GQ:DP        1|0:100:29      0|0:63:30       1|0:100:74
+16     55285695        rs12597971      C       T       .       PASS    AA=T;DP=113     GT:GQ:DP        1|0:100:29      0|0:64:26       1|0:100:58
+1      38735251        .       A       C       .       PASS    AA=A;DP=131     GT:GQ:DP        1|0:100:29      0|0:64:26       1|0:100:75
+4      107575800       .       A       G       .       PASS    AA=A;DP=87      GT:GQ:DP        1|0:100:29      0|0:65:21       1|0:100:26
+15     87323873        rs36020123      A       G       .       PASS    AA=A;DP=102     GT:GQ:DP        1|0:100:29      0|0:65:21       1|0:100:39
+10     17622722        rs10508532      G       C       .       PASS    AA=A;DP=134     GT:GQ:DP        1|0:100:29      0|0:65:21       1|0:100:44
+3      54197110        rs7639238       C       G       .       PASS    AA=C;DP=140     GT:GQ:DP        1|0:100:29      0|0:65:21       1|0:100:50
+5      55011137        rs10940481      C       T       .       PASS    AA=N;DP=108     GT:GQ:DP        1|0:100:29      0|0:65:21       1|0:100:60
+17     78222066        .       T       C       .       PASS    AA=T;DP=117     GT:GQ:DP        1|0:100:29      0|0:65:21       1|0:100:70
+3      189201395       rs9837670       C       T       .       PASS    AA=C;DP=119     GT:GQ:DP        1|0:100:29      0|0:65:21       1|0:100:71
+4      114537403       rs28369579      T       G       .       PASS    AA=T;DP=120     GT:GQ:DP        1|0:100:29      0|0:65:21       1|0:100:72
+17     66545983        rs12937910      T       C       .       PASS    AA=T;DP=123     GT:GQ:DP        1|0:100:29      0|0:65:22       1|0:100:71
+2      232302427       rs838427        G       A       .       PASS    AA=G;DP=130     GT:GQ:DP        1|0:100:29      0|0:65:22       1|0:100:78
+4      182063855       rs7678255       T       C       .       PASS    AA=t;DP=134     GT:GQ:DP        1|0:100:29      0|0:65:22       1|0:100:84
+18     9343809 rs16954989      C       T       .       PASS    AA=C;DP=131     GT:GQ:DP        1|0:100:29      0|0:65:23       1|0:100:37
+2      41999540        .       A       T       .       PASS    AA=a;DP=117     GT:GQ:DP        1|0:100:29      0|0:65:23       1|0:100:65
+13     78637440        rs9574363       T       C       .       PASS    AA=T;DP=123     GT:GQ:DP        1|0:100:29      0|0:66:27       1|0:100:68
+11     97455496        .       A       T       .       PASS    AA=A;DP=104     GT:GQ:DP        1|0:100:29      0|0:68:22       1|0:100:55
+3      145192958       rs1979910       A       C       .       PASS    AA=A;DP=108     GT:GQ:DP        1|0:100:29      0|0:68:22       1|0:100:56
+12     83736089        rs12230132      T       G       .       PASS    AA=T;DP=115     GT:GQ:DP        1|0:100:29      0|0:68:22       1|0:100:60
+3      128477821       .       C       T       .       PASS    AA=c;DP=117     GT:GQ:DP        1|0:100:29      0|0:68:22       1|0:100:65
+8      33388926        rs16880911      C       G       .       PASS    AA=C;DP=118     GT:GQ:DP        1|0:100:29      0|0:68:22       1|0:100:65
+20     17125528        rs7262892       A       G       .       PASS    AA=A;DP=117     GT:GQ:DP        1|0:100:29      0|0:68:22       1|0:100:66
+1      235996316       .       A       C       .       PASS    AA=A;DP=117     GT:GQ:DP        1|0:100:29      0|0:68:22       1|0:100:67
+2      4781234 rs825942        A       G       .       PASS    AA=A;DP=119     GT:GQ:DP        1|0:100:29      0|0:68:22       1|0:100:72
+8      6434856 .       G       A       .       PASS    AA=A;DP=124     GT:GQ:DP        1|0:100:29      0|0:68:22       1|0:100:73
+10     12328786        rs4469792       A       G       .       PASS    AA=A;DP=140     GT:GQ:DP        1|0:100:29      0|0:68:22       1|0:100:88
+3      54011155        rs61679510      A       G       .       PASS    AA=A;DP=125     GT:GQ:DP        1|0:100:29      0|0:68:23       1|0:100:71
+7      80821976        rs28550223      C       T       .       PASS    AA=C;DP=129     GT:GQ:DP        1|0:100:29      0|0:68:23       1|0:100:77
+3      61206171        .       A       T       .       PASS    AA=A;DP=130     GT:GQ:DP        1|0:100:29      0|0:68:23       1|0:100:78
+14     29857986        .       A       G       .       PASS    AA=G;DP=116     GT:GQ:DP        1|0:100:29      0|0:68:24       1|0:100:63
+12     99940963        rs61944925      C       T       .       PASS    AA=C;DP=116     GT:GQ:DP        1|0:100:29      0|0:68:24       1|0:100:66
+13     37927538        .       T       C       .       PASS    AA=T;DP=127     GT:GQ:DP        1|0:100:29      0|0:68:24       1|0:100:77
+4      76703560        rs62318659      G       A       .       PASS    AA=G;DP=136     GT:GQ:DP        1|0:100:29      0|0:68:24       1|0:100:82
+4      96881457        rs7696794       T       A       .       PASS    AA=T;DP=103     GT:GQ:DP        1|0:100:29      0|0:68:28       1|0:100:45
+6      119111844       rs2638527       G       A       .       PASS    AA=G;DP=112     GT:GQ:DP        1|0:100:29      0|0:68:31       1|0:100:52
+6      30886382        rs12528843      T       C       .       PASS    AA=T;DP=129     GT:GQ:DP        1|0:100:29      0|0:69:31       1|0:100:62
+9      1462907 rs16929918      T       C       .       PASS    AA=T;DP=140     GT:GQ:DP        1|0:100:29      0|0:69:34       1|0:100:77
+6      124798598       rs332623        A       G       .       PASS    AA=G;DP=97      GT:GQ:DP        1|0:100:29      0|0:71:23       1|0:100:45
+7      155824391       rs7796499       C       G       .       PASS    AA=C;DP=116     GT:GQ:DP        1|0:100:29      0|0:71:23       1|0:100:60
+2      213002717       .       A       G       .       PASS    AA=A;DP=117     GT:GQ:DP        1|0:100:29      0|0:71:23       1|0:100:62
+16     24464530        .       A       T       .       PASS    AA=A;DP=115     GT:GQ:DP        1|0:100:29      0|0:71:23       1|0:100:63
+4      102350270       rs28717043      T       C       .       PASS    AA=t;DP=118     GT:GQ:DP        1|0:100:29      0|0:71:23       1|0:100:64
+6      81605391        rs6924426       T       C       .       PASS    AA=T;DP=118     GT:GQ:DP        1|0:100:29      0|0:71:23       1|0:100:66
+5      2951511 .       C       A       .       PASS    AA=c;DP=122     GT:GQ:DP        1|0:100:29      0|0:71:23       1|0:100:70
+21     24279112        rs28705198      A       G       .       PASS    AA=-;DP=125     GT:GQ:DP        1|0:100:29      0|0:71:23       1|0:100:73
+18     6022734 .       G       A       .       PASS    AA=G;DP=124     GT:GQ:DP        1|0:100:29      0|0:71:23       1|0:100:75
+8      76349659        rs10464916      T       C       .       PASS    AA=T;DP=134     GT:GQ:DP        1|0:100:29      0|0:71:23       1|0:100:84
+13     107701402       rs3858811       G       C       .       PASS    AA=C;DP=102     GT:GQ:DP        1|0:100:29      0|0:71:24       1|0:100:51
+1      107359000       rs6675948       C       G       .       PASS    AA=C;DP=107;HM2 GT:GQ:DP        1|0:100:29      0|0:71:24       1|0:100:54
+11     3427899 rs7396557       G       T       .       PASS    AA=.;DP=129     GT:GQ:DP        1|0:100:29      0|0:71:24       1|0:100:62
+8      85466120        rs7820097       G       C       .       PASS    AA=C;DP=124     GT:GQ:DP        1|0:100:29      0|0:71:24       1|0:100:70
+20     56382611        rs6015258       C       T       .       PASS    AA=C;DP=130     GT:GQ:DP        1|0:100:29      0|0:71:24       1|0:100:76
+5      169865404       .       T       C       .       PASS    AA=T;DP=134     GT:GQ:DP        1|0:100:29      0|0:71:24       1|0:100:81
+8      102267945       rs7006951       C       T       .       PASS    AA=c;DP=139     GT:GQ:DP        1|0:100:29      0|0:71:25       1|0:100:81
+1      76431875        rs59372100      A       C       .       PASS    AA=A;DP=103     GT:GQ:DP        1|0:100:29      0|0:71:26       1|0:100:48
+5      158734628       rs62377613      C       G       .       PASS    AA=C;DP=119     GT:GQ:DP        1|0:100:29      0|0:72:31       1|0:100:59
+4      75985251        rs10518132      G       T       .       PASS    AA=G;DP=125     GT:GQ:DP        1|0:100:29      0|0:73:35       1|0:100:62
+5      17451017        rs4443417       T       C       .       PASS    AA=T;DP=147     GT:GQ:DP        1|0:100:29      0|0:73:36       1|0:100:82
+7      47298763        rs884824        A       G       .       PASS    AA=A;DP=125     GT:GQ:DP        1|0:100:29      0|0:74:24       1|0:100:73
+4      72080364        .       A       G       .       PASS    AA=G;DP=133     GT:GQ:DP        1|0:100:29      0|0:74:24       1|0:100:81
+12     101893019       rs17842959      A       T       .       PASS    AA=A;DP=133     GT:GQ:DP        1|0:100:29      0|0:74:24       1|0:100:83
+17     59438704        .       C       T       .       PASS    AA=C;DP=112     GT:GQ:DP        1|0:100:29      0|0:74:25       1|0:100:48
+7      156164725       rs1990256       C       T       .       PASS    AA=C;DP=130     GT:GQ:DP        1|0:100:29      0|0:74:25       1|0:100:64
+13     41133363        .       C       T       .       PASS    AA=C;DP=129     GT:GQ:DP        1|0:100:29      0|0:74:25       1|0:100:73
+2      46484652        .       C       G       .       PASS    AA=C;DP=127     GT:GQ:DP        1|0:100:29      0|0:74:25       1|0:100:76
+4      189969064       .       C       G       .       PASS    AA=C;DP=93      GT:GQ:DP        1|0:100:29      0|0:74:26       1|0:100:38
+5      149681658       rs55920387      C       A       .       PASS    AA=C;DP=148     GT:GQ:DP        1|0:100:29      0|0:74:26       1|0:100:48
+17     73159721        rs8066971       A       G       .       PASS    AA=A;DP=163     GT:GQ:DP        1|0:100:29      0|0:74:26       1|0:100:60
+2      183154547       .       C       T       .       PASS    AA=C;DP=139     GT:GQ:DP        1|0:100:29      0|0:74:26       1|0:100:84
+6      111411140       .       A       G       .       PASS    AA=A;DP=148     GT:GQ:DP        1|0:100:29      0|0:74:30       1|0:100:89
+2      118159003       .       G       C       .       PASS    AA=G;DP=140     GT:GQ:DP        1|0:100:29      0|0:75:28       1|0:100:81
+14     84677135        .       T       C       .       PASS    AA=T;DP=129     GT:GQ:DP        1|0:100:29      0|0:75:36       1|0:100:65
+2      86005744        .       G       C       .       PASS    AA=G;DP=168     GT:GQ:DP        1|0:100:29      0|0:76:33       1|0:100:56
+2      199702244       rs61648737      A       C       .       PASS    AA=A;DP=153     GT:GQ:DP        1|0:100:29      0|0:77:25       1|0:100:48
+16     14046702        rs8060508       A       G       .       PASS    AA=A;DP=119     GT:GQ:DP        1|0:100:29      0|0:77:25       1|0:100:64
+3      82449291        .       T       C       .       PASS    AA=N;DP=127     GT:GQ:DP        1|0:100:29      0|0:77:25       1|0:100:67
+15     79487605        rs28546549      A       G       .       PASS    AA=G;DP=119     GT:GQ:DP        1|0:100:29      0|0:77:25       1|0:100:68
+6      32717075        rs9272688       T       C       .       PASS    AA=t;DP=126     GT:GQ:DP        1|0:100:29      0|0:77:25       1|0:100:71
+2      31837914        rs13001265      T       G       .       PASS    AA=G;DP=125     GT:GQ:DP        1|0:100:29      0|0:77:25       1|0:100:72
+14     24498867        rs17109366      A       G       .       PASS    AA=A;DP=127     GT:GQ:DP        1|0:100:29      0|0:77:25       1|0:100:74
+13     23406121        rs1830929       G       A       .       PASS    AA=A;DP=131     GT:GQ:DP        1|0:100:29      0|0:77:25       1|0:100:77
+8      2114098 .       T       C       .       PASS    AA=T;DP=132     GT:GQ:DP        1|0:100:29      0|0:77:25       1|0:100:80
+3      25143750        .       T       A       .       PASS    AA=T;DP=151     GT:GQ:DP        1|0:100:29      0|0:77:25       1|0:100:97
+12     31833247        rs16918942      T       C       .       PASS    AA=C;DP=112     GT:GQ:DP        1|0:100:29      0|0:77:26       1|0:100:56
+14     82477527        .       G       A       .       PASS    AA=G;DP=116     GT:GQ:DP        1|0:100:29      0|0:77:26       1|0:100:63
+6      142642256       rs1319584       T       C       .       PASS    AA=T;DP=122     GT:GQ:DP        1|0:100:29      0|0:77:26       1|0:100:67
+2      235964922       rs2090417       T       C       .       PASS    AA=T;DP=129     GT:GQ:DP        1|0:100:29      0|0:77:26       1|0:100:75
+7      133999016       .       C       G       .       PASS    AA=C;DP=128     GT:GQ:DP        1|0:100:29      0|0:77:26       1|0:100:75
+3      196631031       rs9831944       T       C       .       PASS    AA=T;DP=130     GT:GQ:DP        1|0:100:29      0|0:77:26       1|0:100:77
+3      106406269       rs1525840       T       C       .       PASS    AA=T;DP=140     GT:GQ:DP        1|0:100:29      0|0:77:26       1|0:100:85
+3      60897989        rs62267313      G       C       .       PASS    AA=G;DP=142     GT:GQ:DP        1|0:100:29      0|0:77:26       1|0:100:87
+5      112034442       .       T       A       .       PASS    AA=T;DP=112     GT:GQ:DP        1|0:100:29      0|0:77:27       1|0:100:56
+13     105320983       rs12428362      G       C       .       PASS    AA=G;DP=119     GT:GQ:DP        1|0:100:29      0|0:77:27       1|0:100:63
+20     19043423        rs6035224       A       T       .       PASS    AA=A;DP=130     GT:GQ:DP        1|0:100:29      0|0:77:27       1|0:100:77
+11     73425827        rs17132620      T       C       .       PASS    AA=T;DP=146     GT:GQ:DP        1|0:100:29      0|0:77:27       1|0:100:93
+6      81272893        rs3011304       A       G       .       PASS    AA=G;DP=136     GT:GQ:DP        1|0:100:29      0|0:78:32       1|0:100:76
+10     78753877        rs10824526      C       T       .       PASS    AA=C;DP=144     GT:GQ:DP        1|0:100:29      0|0:79:32       1|0:100:82
+13     18849696        rs9554156       C       T       .       PASS    AA=c;DP=135     GT:GQ:DP        1|0:100:29      0|0:80:26       1|0:100:41
+18     39056756        rs1424397       C       T       .       PASS    AA=T;DP=107     GT:GQ:DP        1|0:100:29      0|0:80:26       1|0:100:51
+2      178251511       rs59234264      C       T       .       PASS    AA=C;DP=109     GT:GQ:DP        1|0:100:29      0|0:80:26       1|0:100:51
+9      78425479        .       G       A       .       PASS    AA=G;DP=115     GT:GQ:DP        1|0:100:29      0|0:80:26       1|0:100:58
+1      81592005        rs12411197      G       A       .       PASS    AA=G;DP=115     GT:GQ:DP        1|0:100:29      0|0:80:26       1|0:100:60
+3      164799110       rs2886072       C       G       .       PASS    AA=G;DP=119     GT:GQ:DP        1|0:100:29      0|0:80:26       1|0:100:66
+6      73182911        .       T       C       .       PASS    AA=T;DP=128     GT:GQ:DP        1|0:100:29      0|0:80:26       1|0:100:74
+5      34566879        rs58618557      A       G       .       PASS    AA=A;DP=123     GT:GQ:DP        1|0:100:29      0|0:80:27       1|0:100:67
+8      127135811       .       A       T       .       PASS    AA=A;DP=104     GT:GQ:DP        1|0:100:29      0|0:83:27       1|0:100:50
+14     46571091        rs1891255       T       G       .       PASS    AA=T;DP=122     GT:GQ:DP        1|0:100:29      0|0:83:27       1|0:100:62
+16     6943172 rs60161116      G       T       .       PASS    AA=G;DP=118     GT:GQ:DP        1|0:100:29      0|0:83:27       1|0:100:62
+5      39255864        .       A       G       .       PASS    AA=G;DP=122     GT:GQ:DP        1|0:100:29      0|0:83:27       1|0:100:67
+9      1681073 rs10962621      C       T       .       PASS    AA=C;DP=136     GT:GQ:DP        1|0:100:29      0|0:83:27       1|0:100:79
+9      22402948        rs1410979       G       A       .       PASS    AA=G;DP=113     GT:GQ:DP        1|0:100:29      0|0:83:28       1|0:100:58
+7      127064580       .       A       G       .       PASS    AA=A;DP=116     GT:GQ:DP        1|0:100:29      0|0:83:28       1|0:100:60
+2      84551552        .       T       C       .       PASS    AA=T;DP=124     GT:GQ:DP        1|0:100:29      0|0:83:28       1|0:100:67
+3      73897965        rs4364116       C       T       .       PASS    AA=C;DP=133     GT:GQ:DP        1|0:100:29      0|0:83:28       1|0:100:77
+22     33411906        rs5749934       G       A       .       PASS    AA=A;DP=139     GT:GQ:DP        1|0:100:29      0|0:83:28       1|0:100:79
+11     105013982       rs4261254       T       C       .       PASS    AA=C;DP=109     GT:GQ:DP        1|0:100:29      0|0:86:28       1|0:100:53
+2      29050217        rs4666156       G       C       .       PASS    AA=T;DP=121     GT:GQ:DP        1|0:100:29      0|0:86:28       1|0:100:66
+14     58281858        rs12435792      A       G       .       PASS    AA=G;DP=137     GT:GQ:DP        1|0:100:29      0|0:86:28       1|0:100:72
+11     12039567        rs59662568      G       C       .       PASS    AA=G;DP=132     GT:GQ:DP        1|0:100:29      0|0:86:28       1|0:100:77
+3      89906205        .       G       C       .       PASS    AA=G;DP=133     GT:GQ:DP        1|0:100:29      0|0:86:28       1|0:100:79
+8      5011766 rs6558972       A       G       .       PASS    AA=N;DP=104     GT:GQ:DP        1|0:100:29      0|0:86:29       1|0:100:36
+5      81021280        .       G       A       .       PASS    AA=G;DP=119     GT:GQ:DP        1|0:100:29      0|0:86:29       1|0:100:60
+1      29664462        rs766383        A       G       .       PASS    AA=G;DP=122;HM2 GT:GQ:DP        1|0:100:29      0|0:86:29       1|0:100:64
+17     3168000 rs2318024       C       G       .       PASS    AA=G;DP=124     GT:GQ:DP        1|0:100:29      0|0:86:29       1|0:100:66
+14     55409660        .       C       T       .       PASS    AA=C;DP=130     GT:GQ:DP        1|0:100:29      0|0:86:29       1|0:100:73
+1      41198403        rs12062753      A       G       .       PASS    AA=G;DP=129     GT:GQ:DP        1|0:100:29      0|0:88:35       1|0:100:66
+9      10147231        .       G       A       .       PASS    AA=G;DP=128     GT:GQ:DP        1|0:100:29      0|0:89:29       1|0:100:70
+8      36353506        .       T       G       .       PASS    AA=T;DP=133     GT:GQ:DP        1|0:100:29      0|0:89:29       1|0:100:76
+3      64915747        .       A       T       .       PASS    AA=A;DP=136     GT:GQ:DP        1|0:100:29      0|0:89:30       1|0:100:77
+16     78741438        rs4888080       A       G       .       PASS    AA=a;DP=142     GT:GQ:DP        1|0:100:29      0|0:89:30       1|0:100:81
+5      127688515       .       T       C       .       PASS    AA=T;DP=113     GT:GQ:DP        1|0:100:29      0|0:89:31       1|0:100:51
+11     131304085       rs7116183       A       T       .       PASS    AA=T;DP=146     GT:GQ:DP        1|0:100:29      0|0:92:30       1|0:100:45
+6      170589161       rs2075920       C       T       .       PASS    AA=T;DP=148     GT:GQ:DP        1|0:100:29      0|0:92:30       1|0:100:47
+7      119635484       .       G       A       .       PASS    AA=G;DP=112     GT:GQ:DP        1|0:100:29      0|0:92:30       1|0:100:53
+7      125828310       rs4731312       A       C       .       PASS    AA=a;DP=136     GT:GQ:DP        1|0:100:29      0|0:92:31       1|0:100:66
+16     81666760        rs12446149      G       A       .       PASS    AA=g;DP=138     GT:GQ:DP        1|0:100:29      0|0:92:31       1|0:100:79
+11     105968522       rs34083913      C       T       .       PASS    AA=T;DP=144     GT:GQ:DP        1|0:100:29      0|0:92:31       1|0:100:83
+18     66191857        rs57530393      A       C       .       PASS    AA=A;DP=145     GT:GQ:DP        1|0:100:29      0|0:92:37       1|0:100:81
+10     54401434        .       T       C       .       PASS    AA=T;DP=125     GT:GQ:DP        1|0:100:29      0|0:95:31       1|0:100:62
+2      55036716        .       A       G       .       PASS    AA=A;DP=125     GT:GQ:DP        1|0:100:29      0|0:95:31       1|0:100:67
+7      28680952        rs41344 T       C       .       PASS    AA=T;DP=135     GT:GQ:DP        1|0:100:29      0|0:95:31       1|0:100:75
+3      161212919       .       C       T       .       PASS    AA=C;DP=138     GT:GQ:DP        1|0:100:29      0|0:95:31       1|0:100:78
+2      62307098        rs57193974      T       C       .       PASS    AA=T;DP=145     GT:GQ:DP        1|0:100:29      0|0:95:34       1|0:100:83
+17     35987242        .       G       A       .       PASS    AA=G;DP=121     GT:GQ:DP        1|0:100:29      0|0:98:32       1|0:100:61
+11     79151274        rs1893913       C       A       .       PASS    AA=C;DP=126     GT:GQ:DP        1|0:100:29      0|0:98:32       1|0:100:62
+2      174213170       rs13028485      G       A       .       PASS    AA=G;DP=156     GT:GQ:DP        1|0:100:29      0|0:98:32       1|0:100:96
+16     62831982        .       T       C       .       PASS    AA=T;DP=128     GT:GQ:DP        1|0:100:29      0|0:98:33       1|0:100:68
+10     55054749        rs12256830      C       T       .       PASS    AA=C;DP=134     GT:GQ:DP        1|0:100:29      0|0:98:36       1|0:100:72
+4      96589628        rs4103380       G       C       .       PASS    AA=C;DP=109     GT:GQ:DP        1|0:100:29      1|0:100:14      1|1:100:64
+19     4871752 rs16992667      A       G       .       PASS    AA=G;DP=124     GT:GQ:DP        1|0:100:29      1|0:100:14      1|1:100:80
+2      101142317       rs55877023      A       G       .       PASS    AA=A;DP=100     GT:GQ:DP        1|0:100:29      1|0:100:15      1|1:100:55
+6      20175286        rs9366328       A       G       .       PASS    AA=A;DP=101     GT:GQ:DP        1|0:100:29      1|0:100:15      1|1:100:58
+4      68758763        rs6840064       T       C       .       PASS    AA=t;DP=107     GT:GQ:DP        1|0:100:29      1|0:100:15      1|1:100:64
+6      10860869        rs1233893       T       G       .       PASS    AA=t;DP=137     GT:GQ:DP        1|0:100:29      1|0:100:15      1|1:100:94
+10     88123304        rs58061869      G       A       .       PASS    AA=G;DP=128     GT:GQ:DP        1|0:100:29      1|0:100:15      1|1:77:43
+1      80579422        .       G       A       .       PASS    AA=A;DP=91      GT:GQ:DP        1|0:100:29      1|0:100:17      1|1:100:37
+10     123650145       rs12777513      A       T       .       PASS    AA=A;DP=89      GT:GQ:DP        1|0:100:29      1|0:100:18      1|1:100:35
+6      154751237       rs769165        C       T       .       PASS    AA=T;DP=104     GT:GQ:DP        1|0:100:29      1|0:100:18      1|1:100:60
+18     71851418        rs1653144       T       G       .       PASS    AA=T;DP=118     GT:GQ:DP        1|0:100:29      1|0:100:18      1|1:100:67
+8      55843346        rs983248        C       T       .       PASS    AA=C;DP=141     GT:GQ:DP        1|0:100:29      1|0:100:19      1|1:100:45
+22     46147590        rs6008166       A       G       .       PASS    AA=N;DP=113     GT:GQ:DP        1|0:100:29      1|0:100:19      1|1:100:55
+12     121156754       .       A       G       .       PASS    AA=A;DP=120     GT:GQ:DP        1|0:100:29      1|0:100:19      1|1:100:72
+2      202012344       rs28500633      G       A       .       PASS    AA=A;DP=88      GT:GQ:DP        1|0:100:29      1|0:100:19      1|1:81:28
+6      123266184       rs61458788      A       G       .       PASS    AA=A;DP=92      GT:GQ:DP        1|0:100:29      1|0:100:19      1|1:88:41
+11     97256779        rs11213110      T       G       .       PASS    AA=G;DP=101     GT:GQ:DP        1|0:100:29      1|0:100:20      1|1:100:50
+2      237759288       rs7583707       C       T       .       PASS    AA=T;DP=99      GT:GQ:DP        1|0:100:29      1|0:100:20      1|1:95:52
+1      105933239       rs10881330      A       G       .       PASS    AA=A;DP=98      GT:GQ:DP        1|0:100:29      1|0:100:21      1|1:100:47
+2      86384937        .       A       G       .       PASS    AA=A;DP=109     GT:GQ:DP        1|0:100:29      1|0:100:22      1|1:100:47
+7      89864652        rs11972149      G       T       .       PASS    AA=T;DP=111     GT:GQ:DP        1|0:100:29      1|0:100:22      1|1:100:60
+14     78081097        rs10144398      A       G       .       PASS    AA=G;DP=129     GT:GQ:DP        1|0:100:29      1|0:100:22      1|1:100:63
+4      182423880       rs1947453       T       A       .       PASS    AA=T;DP=115     GT:GQ:DP        1|0:100:29      1|0:100:22      1|1:100:65
+8      4258621 rs1217651       G       A       .       PASS    AA=A;DP=123     GT:GQ:DP        1|0:100:29      1|0:100:22      1|1:100:71
+2      196632694       rs10207336      G       T       .       PASS    AA=T;DP=143     GT:GQ:DP        1|0:100:29      1|0:100:22      1|1:100:87
+18     63770859        rs1460731       G       C       .       PASS    AA=C;DP=96      GT:GQ:DP        1|0:100:29      1|0:100:22      1|1:96:34
+1      209487556       rs3111258       T       G       .       PASS    AA=T;DP=105;HM2;HM3     GT:GQ:DP        1|0:100:29      1|0:100:23      1|1:100:53
+10     86884766        rs55643139      T       C       .       PASS    AA=T;DP=114     GT:GQ:DP        1|0:100:29      1|0:100:23      1|1:100:61
+9      94731328        rs7027677       G       A       .       PASS    AA=g;DP=104     GT:GQ:DP        1|0:100:29      1|0:100:24      1|1:100:50
+3      67150636        rs9883895       T       C       .       PASS    AA=T;DP=111     GT:GQ:DP        1|0:100:29      1|0:100:24      1|1:100:54
+11     110836196       rs9783376       A       G       .       PASS    AA=G;DP=112     GT:GQ:DP        1|0:100:29      1|0:100:24      1|1:100:59
+2      26350222        .       G       C       .       PASS    AA=C;DP=122     GT:GQ:DP        1|0:100:29      1|0:100:24      1|1:100:62
+12     46402900        rs6580636       G       C       .       PASS    AA=G;DP=127     GT:GQ:DP        1|0:100:29      1|0:100:24      1|1:100:74
+14     93152217        rs12432051      A       T       .       PASS    AA=A;DP=110     GT:GQ:DP        1|0:100:29      1|0:100:25      1|1:100:56
+11     120102572       rs60236810      A       G       .       PASS    AA=A;DP=135     GT:GQ:DP        1|0:100:29      1|0:100:25      1|1:100:81
+10     84415643        .       G       T       .       PASS    AA=G;DP=144     GT:GQ:DP        1|0:100:29      1|0:100:25      1|1:100:91
+7      9085741 rs4720819       C       G       .       PASS    AA=G;DP=113     GT:GQ:DP        1|0:100:29      1|0:100:25      1|1:77:38
+18     68493697        rs12960281      C       T       .       PASS    AA=c;DP=103     GT:GQ:DP        1|0:100:29      1|0:100:25      1|1:95:42
+3      73602422        rs7650855       T       C       .       PASS    AA=C;DP=124     GT:GQ:DP        1|0:100:29      1|0:100:26      1|1:100:70
+15     46098636        rs9788731       C       T       .       PASS    AA=C;DP=130     GT:GQ:DP        1|0:100:29      1|0:100:26      1|1:100:78
+2      230253901       rs7558924       T       C       .       PASS    AA=T;DP=133     GT:GQ:DP        1|0:100:29      1|0:100:26      1|1:100:81
+2      52859701        rs1454387       A       G       .       PASS    AA=A;DP=136     GT:GQ:DP        1|0:100:29      1|0:100:26      1|1:100:81
+8      15376922        rs10095315      A       G       .       PASS    AA=A;DP=109     GT:GQ:DP        1|0:100:29      1|0:100:26      1|1:74:55
+2      161390199       rs6745789       G       A       .       PASS    AA=G;DP=109     GT:GQ:DP        1|0:100:29      1|0:100:26      1|1:91:53
+3      177800894       rs9827047       G       A       .       PASS    AA=A;DP=104     GT:GQ:DP        1|0:100:29      1|0:100:27      1|1:100:38
+7      131001438       rs7784841       T       C       .       PASS    AA=T;DP=108     GT:GQ:DP        1|0:100:29      1|0:100:27      1|1:100:43
+15     45480845        rs384616        C       A       .       PASS    AA=A;DP=112     GT:GQ:DP        1|0:100:29      1|0:100:27      1|1:100:54
+1      54601402        rs12038092      G       C       .       PASS    AA=g;DP=121     GT:GQ:DP        1|0:100:29      1|0:100:27      1|1:100:65
+16     79209794        rs9924554       A       G       .       PASS    AA=A;DP=152     GT:GQ:DP        1|0:100:29      1|0:100:28      1|1:100:54
+8      104538259       rs1898253       A       G       .       PASS    AA=A;DP=144     GT:GQ:DP        1|0:100:29      1|0:100:29      1|1:100:85
+1      220567333       rs34704468      G       A       .       PASS    AA=G;DP=138     GT:GQ:DP        1|0:100:29      1|0:100:31      1|1:100:78
+5      26693506        .       C       T       .       PASS    AA=C;DP=126     GT:GQ:DP        1|0:100:29      1|0:100:33      1|1:100:54
+11     67626897        rs11228131      G       A       .       PASS    AA=A;DP=127     GT:GQ:DP        1|0:100:29      1|0:100:33      1|1:50:26
+2      216914734       rs4674078       T       G       .       PASS    AA=G;DP=146     GT:GQ:DP        1|0:100:29      1|0:100:34      1|1:100:83
+10     49394806        rs7911247       A       G       .       PASS    AA=G;DP=140     GT:GQ:DP        1|0:100:29      1|0:100:34      1|1:96:33
+1      62732689        rs10889335      A       G       .       PASS    AA=A;DP=128;HM2;HM3     GT:GQ:DP        1|0:100:29      1|0:100:36      1|1:100:62
+17     61776841        rs41461845      C       G       .       PASS    AA=C;DP=138     GT:GQ:DP        1|0:100:29      1|0:10:21       1|1:100:92
+6      22679302        rs3734215       T       C       .       PASS    AA=T;DP=92      GT:GQ:DP        1|0:100:29      1|0:36:18       1|1:97:45
+2      39800941        .       A       G       .       PASS    AA=G;DP=90      GT:GQ:DP        1|0:100:29      1|0:45:12       1|1:100:50
+8      87616144        rs10956873      T       C       .       PASS    AA=t;DP=91      GT:GQ:DP        1|0:100:29      1|0:46:15       1|1:100:47
+4      88043565        rs28401697      G       A       .       PASS    AA=G;DP=111     GT:GQ:DP        1|0:100:29      1|0:59:20       1|1:100:52
+3      69094680        rs57445590      C       A       .       PASS    AA=C;DP=119     GT:GQ:DP        1|0:100:29      1|0:76:17       1|1:100:67
+2      161453483       rs4664386       C       T       .       PASS    AA=C;DP=133     GT:GQ:DP        1|0:100:29      1|0:76:22       1|1:100:83
+16     87689435        rs10163422      C       T       .       PASS    AA=C;DP=88      GT:GQ:DP        1|0:100:29      1|0:77:11       1|1:86:36
+6      17557623        rs61114476      A       T       .       PASS    AA=A;DP=91      GT:GQ:DP        1|0:100:29      1|0:82:23       1|1:52:32
+12     17708730        rs1370221       C       T       .       PASS    AA=T;DP=126     GT:GQ:DP        1|0:100:29      1|0:83:21       1|1:100:78
+6      24612168        rs2760117       C       T       .       PASS    AA=C;DP=118     GT:GQ:DP        1|0:100:29      1|0:86:28       1|1:100:62
+19     61470348        rs965567        C       T       .       PASS    AA=C;DP=134     GT:GQ:DP        1|0:100:29      1|0:90:27       1|1:100:78
+10     88432123        rs10749541      C       T       .       PASS    AA=C;DP=109     GT:GQ:DP        1|0:100:29      1|0:99:22       1|1:100:58
+14     99222255        rs12885555      G       A       .       PASS    AA=A;DP=151     GT:GQ:DP        1|0:100:29      1|1:100:39      1|1:100:41
+1      198146368       rs12748757      C       G       .       PASS    AA=G;DP=72;HM2  GT:GQ:DP        1|0:100:29      1|1:12:4        1|1:75:39
+10     7540021 rs2248190       C       G       .       PASS    AA=C;DP=100     GT:GQ:DP        1|0:100:29      1|1:14:19       1|1:94:50
+6      65149607        rs626227        T       C       .       PASS    AA=C;DP=86      GT:GQ:DP        1|0:100:29      1|1:21:12       1|1:85:45
+9      90775044        rs7865390       T       G       .       PASS    AA=G;DP=98      GT:GQ:DP        1|0:100:29      1|1:27:10       1|1:100:60
+8      29526784        rs6558131       G       A       .       PASS    AA=G;DP=119     GT:GQ:DP        1|0:100:29      1|1:27:20       1|1:100:68
+12     93044035        rs2361362       T       G       .       PASS    AA=T;DP=120     GT:GQ:DP        1|0:100:29      1|1:27:20       1|1:100:72
+11     63928458        rs520277        C       T       .       PASS    AA=T;DP=127     GT:GQ:DP        1|0:100:29      1|1:29:22       1|1:100:76
+2      240983771       rs12695017      G       A       .       PASS    AA=G;DP=117     GT:GQ:DP        1|0:100:29      1|1:30:11       1|1:100:78
+20     8982999 rs6056362       G       C       .       PASS    AA=G;DP=86      GT:GQ:DP        1|0:100:29      1|1:33:11       1|1:100:46
+7      41355724        rs920414        A       C       .       PASS    AA=A;DP=134     GT:GQ:DP        1|0:100:29      1|1:35:25       1|1:100:78
+7      125625800       rs579049        T       C       .       PASS    AA=t;DP=125     GT:GQ:DP        1|0:100:29      1|1:36:12       1|1:100:85
+1      11608554        rs11121783      T       C       .       PASS    AA=C;DP=103;HM2 GT:GQ:DP        1|0:100:29      1|1:37:14       1|1:100:55
+10     123396653       rs7923788       T       C       .       PASS    AA=C;DP=96      GT:GQ:DP        1|0:100:29      1|1:39:13       1|1:100:55
+10     120995641       rs2420613       T       G       .       PASS    AA=N;DP=115     GT:GQ:DP        1|0:100:29      1|1:39:13       1|1:100:75
+2      233343457       rs2293780       T       C       .       PASS    AA=C;DP=108     GT:GQ:DP        1|0:100:29      1|1:39:19       1|1:76:61
+4      58240878        rs11730404      T       G       .       PASS    AA=T;DP=131     GT:GQ:DP        1|0:100:29      1|1:41:23       1|1:100:76
+14     83022134        rs8019913       C       T       .       PASS    AA=T;DP=94      GT:GQ:DP        1|0:100:29      1|1:42:15       1|1:100:50
+2      30268552        rs34491742      C       G       .       PASS    AA=C;DP=100     GT:GQ:DP        1|0:100:29      1|1:42:15       1|1:100:56
+5      84121259        rs4591746       C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        1|0:100:29      1|1:42:15       1|1:100:69
+18     65696260        rs1788243       G       A       .       PASS    AA=G;DP=92      GT:GQ:DP        1|0:100:29      1|1:45:15       1|1:100:46
+1      210980213       rs6702101       C       T       .       PASS    AA=T;DP=103;HM2;HM3     GT:GQ:DP        1|0:100:29      1|1:45:15       1|1:100:56
+20     62325638        rs2427618       C       T       .       PASS    AA=c;DP=117     GT:GQ:DP        1|0:100:29      1|1:45:15       1|1:100:73
+9      99861096        rs4743158       T       C       .       PASS    AA=T;DP=129     GT:GQ:DP        1|0:100:29      1|1:45:15       1|1:100:87
+13     21717139        rs9506812       T       C       .       PASS    AA=C;DP=94      GT:GQ:DP        1|0:100:29      1|1:45:15       1|1:53:40
+9      122191500       rs4836820       A       G       .       PASS    AA=G;DP=142     GT:GQ:DP        1|0:100:29      1|1:46:23       1|1:100:46
+2      45375533        rs6737647       T       C       .       PASS    AA=C;DP=90      GT:GQ:DP        1|0:100:29      1|1:48:17       1|1:100:45
+1      72883443        rs12063429      T       C       .       PASS    AA=T;DP=115;HM2 GT:GQ:DP        1|0:100:29      1|1:48:17       1|1:100:72
+22     28436659        rs2530685       A       G       .       PASS    AA=G;DP=106     GT:GQ:DP        1|0:100:29      1|1:48:17       1|1:90:61
+21     30996701        rs9305430       A       G       .       PASS    AA=A;DP=95      GT:GQ:DP        1|0:100:29      1|1:48:18       1|1:100:46
+3      14620775        rs7633084       T       C       .       PASS    AA=C;DP=94      GT:GQ:DP        1|0:100:29      1|1:51:17       1|1:100:37
+1      227100745       rs1891201       G       A       .       PASS    AA=A;DP=135;HM2 GT:GQ:DP        1|0:100:29      1|1:51:18       1|1:100:44
+13     46344848        rs2770298       C       T       .       PASS    AA=T;DP=103     GT:GQ:DP        1|0:100:29      1|1:51:18       1|1:57:56
+4      189743880       rs13111875      G       A       .       PASS    AA=G;DP=125     GT:GQ:DP        1|0:100:29      1|1:51:19       1|1:100:76
+1      94064069        rs11165012      T       C       .       PASS    AA=C;DP=115;HM2;HM3     GT:GQ:DP        1|0:100:29      1|1:51:20       1|1:100:57
+8      136802189       rs7830941       T       C       .       PASS    AA=C;DP=112     GT:GQ:DP        1|0:100:29      1|1:51:22       1|1:100:60
+13     94677842        rs6492771       C       T       .       PASS    AA=C;DP=125     GT:GQ:DP        1|0:100:29      1|1:53:29       1|1:100:67
+4      11214958        rs17427761      T       C       .       PASS    AA=T;DP=138     GT:GQ:DP        1|0:100:29      1|1:54:19       1|1:100:73
+11     133917158       rs4439525       A       G       .       PASS    AA=G;DP=135     GT:GQ:DP        1|0:100:29      1|1:54:19       1|1:100:87
+3      36903322        rs9862188       A       C       .       PASS    AA=C;DP=116     GT:GQ:DP        1|0:100:29      1|1:55:23       1|1:100:65
+11     82094613        rs7127976       T       C       .       PASS    AA=T;DP=111     GT:GQ:DP        1|0:100:29      1|1:57:19       1|1:100:51
+4      58292459        rs3106059       C       T       .       PASS    AA=T;DP=113     GT:GQ:DP        1|0:100:29      1|1:57:19       1|1:100:52
+18     75242948        .       T       G       .       PASS    AA=T;DP=120     GT:GQ:DP        1|0:100:29      1|1:57:19       1|1:100:72
+2      3777469 rs357971        C       G       .       PASS    AA=G;DP=100     GT:GQ:DP        1|0:100:29      1|1:58:21       1|1:100:37
+4      94548360        rs7667044       A       G       .       PASS    AA=G;DP=89      GT:GQ:DP        1|0:100:29      1|1:60:20       1|1:100:40
+14     63762130        rs1152583       C       A       .       PASS    AA=C;DP=109     GT:GQ:DP        1|0:100:29      1|1:60:20       1|1:100:51
+12     1927962 rs2240611       C       A       .       PASS    AA=C;DP=108     GT:GQ:DP        1|0:100:29      1|1:60:20       1|1:100:59
+3      7863742 rs407624        A       G       .       PASS    AA=G;DP=112     GT:GQ:DP        1|0:100:29      1|1:60:22       1|1:100:62
+16     19532253        rs13335085      T       G       .       PASS    AA=G;DP=112     GT:GQ:DP        1|0:100:29      1|1:63:21       1|1:100:60
+5      168111918       rs11739018      C       A       .       PASS    AA=A;DP=114     GT:GQ:DP        1|0:100:29      1|1:63:21       1|1:100:65
+7      153500077       rs6945493       G       C       .       PASS    AA=C;DP=102     GT:GQ:DP        1|0:100:29      1|1:63:22       1|1:100:52
+16     80113823        rs2966103       G       C       .       PASS    AA=C;DP=117     GT:GQ:DP        1|0:100:29      1|1:63:22       1|1:100:67
+11     12981410        rs4587711       C       G       .       PASS    AA=C;DP=110     GT:GQ:DP        1|0:100:29      1|1:63:23       1|1:100:58
+7      124392662       rs6466973       G       A       .       PASS    AA=A;DP=117     GT:GQ:DP        1|0:100:29      1|1:63:27       1|1:100:57
+2      116633078       rs6707346       C       G       .       PASS    AA=G;DP=137     GT:GQ:DP        1|0:100:29      1|1:64:28       1|1:100:40
+1      25275467        rs372151        A       T       .       PASS    AA=T;DP=119;HM2 GT:GQ:DP        1|0:100:29      1|1:65:26       1|1:100:67
+20     16172796        rs1541066       A       G       .       PASS    AA=A;DP=113     GT:GQ:DP        1|0:100:29      1|1:66:22       1|1:100:61
+8      41173895        rs4527854       C       T       .       PASS    AA=T;DP=118     GT:GQ:DP        1|0:100:29      1|1:66:22       1|1:100:64
+14     93582819        rs3748331       C       T       .       PASS    AA=T;DP=125     GT:GQ:DP        1|0:100:29      1|1:66:23       1|1:100:70
+13     87853680        rs7985310       G       T       .       PASS    AA=G;DP=108     GT:GQ:DP        1|0:100:29      1|1:69:23       1|1:100:54
+11     58249996        rs570244        T       C       .       PASS    AA=T;DP=153     GT:GQ:DP        1|0:100:29      1|1:70:35       1|1:100:93
+6      97315956        rs4839868       T       C       .       PASS    AA=C;DP=102     GT:GQ:DP        1|0:100:29      1|1:72:24       1|1:100:47
+1      92699665        rs10399671      A       T       .       PASS    AA=T;DP=126;HM2 GT:GQ:DP        1|0:100:29      1|1:72:24       1|1:100:59
+17     66589339        rs11871500      T       C       .       PASS    AA=C;DP=123     GT:GQ:DP        1|0:100:29      1|1:72:24       1|1:100:72
+3      118808141       rs7645105       C       T       .       PASS    AA=T;DP=119     GT:GQ:DP        1|0:100:29      1|1:75:25       1|1:100:50
+13     31827232        rs1799955       A       G       .       PASS    AA=A;DP=112     GT:GQ:DP        1|0:100:29      1|1:75:25       1|1:100:56
+6      79056822        rs818301        C       T       .       PASS    AA=T;DP=122     GT:GQ:DP        1|0:100:29      1|1:75:25       1|1:100:68
+4      111486787       rs243992        G       C       .       PASS    AA=C;DP=122     GT:GQ:DP        1|0:100:29      1|1:78:27       1|1:100:63
+18     63743860        rs9953727       T       C       .       PASS    AA=T;DP=148     GT:GQ:DP        1|0:100:29      1|1:79:27       1|1:100:88
+17     11665669        rs8182254       G       A       .       PASS    AA=A;DP=118     GT:GQ:DP        1|0:100:29      1|1:81:27       1|1:100:64
+4      19853362        rs1853387       T       C       .       PASS    AA=T;DP=139     GT:GQ:DP        1|0:100:29      1|1:81:28       1|1:100:40
+6      125633087       rs12524855      G       A       .       PASS    AA=G;DP=132     GT:GQ:DP        1|0:100:29      1|1:84:29       1|1:100:70
+1      73123308        rs2692850       A       G       .       PASS    AA=N;DP=111;HM2 GT:GQ:DP        1|0:100:29      1|1:84:30       1|1:100:54
+11     11078756        rs4500482       T       C       .       PASS    AA=C;DP=113     GT:GQ:DP        1|0:100:29      1|1:84:35       1|1:100:38
+13     103452394       rs9586343       A       G       .       PASS    AA=a;DP=154     GT:GQ:DP        1|0:100:29      1|1:87:31       1|1:100:93
+13     23071986        rs11617034      T       G       .       PASS    AA=G;DP=87      GT:GQ:DP        1|0:100:29      1|1:8:12        1|1:100:36
+5      162634837       rs1427997       A       G       .       PASS    AA=A;DP=124     GT:GQ:DP        1|0:100:29      1|1:91:32       1|1:100:63
+3      108514105       rs2081513       A       G       .       PASS    AA=G;DP=135     GT:GQ:DP        1|0:100:29      1|1:93:32       1|1:100:74
+7      108578480       rs60741451      T       A       .       PASS    AA=T;DP=117     GT:GQ:DP        1|0:100:30      0|0:100:33      1|0:100:57
+2      18525394        rs2345719       A       G       .       PASS    AA=G;DP=123     GT:GQ:DP        1|0:100:30      0|0:100:33      1|0:100:59
+3      132665931       rs17277065      T       C       .       PASS    AA=T;DP=125     GT:GQ:DP        1|0:100:30      0|0:100:34      1|0:100:55
+8      94391238        .       C       T       .       PASS    AA=T;DP=133     GT:GQ:DP        1|0:100:30      0|0:100:35      1|0:100:68
+2      5196487 rs13425103      A       G       .       PASS    AA=A;DP=139     GT:GQ:DP        1|0:100:30      0|0:100:35      1|0:100:72
+13     31467815        rs121046        G       A       .       PASS    AA=G;DP=139     GT:GQ:DP        1|0:100:30      0|0:100:35      1|0:100:75
+18     21926360        rs7239196       G       C       .       PASS    AA=C;DP=137     GT:GQ:DP        1|0:100:30      0|0:100:37      1|0:100:73
+9      84484115        .       C       T       .       PASS    AA=C;DP=140     GT:GQ:DP        1|0:100:30      0|0:100:38      1|0:100:71
+4      63739924        rs11938965      G       T       .       PASS    AA=g;DP=129     GT:GQ:DP        1|0:100:30      0|0:13:14       1|0:100:86
+21     31343629        rs2833210       A       C       .       PASS    AA=A;DP=130     GT:GQ:DP        1|0:100:30      0|0:14:18       1|0:100:82
+6      122764007       rs9385245       G       C       .       PASS    AA=G;DP=125     GT:GQ:DP        1|0:100:30      0|0:18:16       1|0:100:79
+9      75566653        rs12342428      G       A       .       PASS    AA=G;DP=125     GT:GQ:DP        1|0:100:30      0|0:21:17       1|0:100:81
+9      26028559        rs12341293      T       A       .       PASS    AA=T;DP=121     GT:GQ:DP        1|0:100:30      0|0:21:22       1|0:100:73
+11     79094702        rs2264519       C       T       .       PASS    AA=T;DP=107     GT:GQ:DP        1|0:100:30      0|0:22:14       1|0:100:64
+8      143411862       rs13281023      C       T       .       PASS    AA=T;DP=84      GT:GQ:DP        1|0:100:30      0|0:26:10       1|0:100:44
+2      117707159       .       A       T       .       PASS    AA=a;DP=101     GT:GQ:DP        1|0:100:30      0|0:26:18       1|0:100:39
+1      187111391       rs7548521       C       T       .       PASS    AA=T;DP=126;HM2;HM3     GT:GQ:DP        1|0:100:30      0|0:26:19       1|0:100:77
+9      25699438        rs10120755      A       G       .       PASS    AA=a;DP=104     GT:GQ:DP        1|0:100:30      0|0:26:23       1|0:100:53
+13     102843403       rs61310395      C       T       .       PASS    AA=C;DP=80      GT:GQ:DP        1|0:100:30      0|0:26:8        1|0:100:42
+14     64306321        .       T       C       .       PASS    AA=T;DP=94      GT:GQ:DP        1|0:100:30      0|0:26:8        1|0:100:51
+4      144077816       rs55735708      G       A       .       PASS    AA=G;DP=102     GT:GQ:DP        1|0:100:30      0|0:26:8        1|0:100:59
+14     78036543        rs7151521       C       G       .       PASS    AA=G;DP=108     GT:GQ:DP        1|0:100:30      0|0:27:23       1|0:100:55
+17     67963351        rs62071091      T       C       .       PASS    AA=T;DP=131     GT:GQ:DP        1|0:100:30      0|0:29:20       1|0:100:39
+5      160390359       .       G       A       .       PASS    AA=g;DP=94      GT:GQ:DP        1|0:100:30      0|0:29:20       1|0:100:45
+12     116348300       rs7967968       C       G       .       PASS    AA=C;DP=143     GT:GQ:DP        1|0:100:30      0|0:30:24       1|0:100:90
+1      169414784       rs6678123       A       G       .       PASS    AA=A;DP=90      GT:GQ:DP        1|0:100:30      0|0:32:10       1|0:100:41
+9      5401894 .       A       G       .       PASS    AA=A;DP=99      GT:GQ:DP        1|0:100:30      0|0:32:10       1|0:100:47
+12     103469558       .       C       T       .       PASS    AA=C;DP=143     GT:GQ:DP        1|0:100:30      0|0:32:21       1|0:100:46
+17     71477893        rs56144875      G       A       .       PASS    AA=G;DP=129     GT:GQ:DP        1|0:100:30      0|0:34:16       1|0:100:86
+15     96213861        rs8036901       G       A       .       PASS    AA=G;DP=113     GT:GQ:DP        1|0:100:30      0|0:35:12       1|0:100:29
+20     35710773        rs198485        A       C       .       PASS    AA=C;DP=106     GT:GQ:DP        1|0:100:30      0|0:35:13       1|0:100:63
+1      14076432        rs34889445      C       G       .       PASS    AA=C;DP=119     GT:GQ:DP        1|0:100:30      0|0:35:13       1|0:100:76
+1      75957896        rs7534754       G       A       .       PASS    AA=g;DP=101;HM2;HM3     GT:GQ:DP        1|0:100:30      0|0:35:22       1|0:100:49
+19     63313304        rs2554986       C       T       .       PASS    AA=T;DP=118     GT:GQ:DP        1|0:100:30      0|0:36:17       1|0:100:74
+1      95168114        .       C       A       .       PASS    AA=C;DP=105     GT:GQ:DP        1|0:100:30      0|0:38:12       1|0:100:62
+22     24127443        rs58722185      G       A       .       PASS    AA=G;DP=131     GT:GQ:DP        1|0:100:30      0|0:38:19       1|0:100:82
+8      41540058        rs58073372      T       C       .       PASS    AA=T;DP=109     GT:GQ:DP        1|0:100:30      0|0:39:18       1|0:100:60
+9      133609138       rs11243501      T       C       .       PASS    AA=T;DP=146     GT:GQ:DP        1|0:100:30      0|0:41:13       1|0:100:53
+22     20923910        .       A       G       .       PASS    AA=.;DP=101     GT:GQ:DP        1|0:100:30      0|0:41:13       1|0:100:58
+7      63194296        rs10276159      G       C       .       PASS    AA=c;DP=99      GT:GQ:DP        1|0:100:30      0|0:41:13       1|0:100:59
+16     82566810        .       G       T       .       PASS    AA=G;DP=109     GT:GQ:DP        1|0:100:30      0|0:41:13       1|0:100:65
+6      169428286       .       G       A       .       PASS    AA=G;DP=114     GT:GQ:DP        1|0:100:30      0|0:41:13       1|0:100:68
+7      24503225        rs6956276       C       T       .       PASS    AA=C;DP=121     GT:GQ:DP        1|0:100:30      0|0:41:13       1|0:100:74
+17     57063765        rs60033271      C       G       .       PASS    AA=C;DP=95      GT:GQ:DP        1|0:100:30      0|0:41:14       1|0:100:38
+12     86671292        rs28482157      A       G       .       PASS    AA=a;DP=95      GT:GQ:DP        1|0:100:30      0|0:41:14       1|0:100:51
+17     32948187        rs28526123      C       G       .       PASS    AA=C;DP=107     GT:GQ:DP        1|0:100:30      0|0:41:17       1|0:100:61
+2      165941651       .       C       A       .       PASS    AA=C;DP=119     GT:GQ:DP        1|0:100:30      0|0:42:20       1|0:100:70
+16     85283507        rs9888814       G       T       .       PASS    AA=T;DP=101     GT:GQ:DP        1|0:100:30      0|0:43:19       1|0:100:54
+7      153678891       rs58620393      C       T       .       PASS    AA=C;DP=134     GT:GQ:DP        1|0:100:30      0|0:43:25       1|0:100:33
+14     76712713        rs60701738      C       T       .       PASS    AA=C;DP=127     GT:GQ:DP        1|0:100:30      0|0:43:25       1|0:100:71
+3      11163016        rs56964257      G       A       .       PASS    AA=A;DP=133     GT:GQ:DP        1|0:100:30      0|0:43:25       1|0:100:77
+7      120875651       rs2178187       A       G       .       PASS    AA=A;DP=127     GT:GQ:DP        1|0:100:30      0|0:44:14       1|0:100:40
+5      177318488       .       C       T       .       PASS    AA=.;DP=103     GT:GQ:DP        1|0:100:30      0|0:44:14       1|0:100:57
+18     53732103        rs57748204      A       G       .       PASS    AA=G;DP=105     GT:GQ:DP        1|0:100:30      0|0:44:14       1|0:100:65
+1      194227751       rs10801508      C       T       .       PASS    AA=T;DP=113     GT:GQ:DP        1|0:100:30      0|0:44:14       1|0:100:68
+5      8051312 rs56315617      G       A       .       PASS    AA=g;DP=127     GT:GQ:DP        1|0:100:30      0|0:44:14       1|0:100:85
+4      7410007 rs3894735       T       A       .       PASS    AA=T;DP=130     GT:GQ:DP        1|0:100:30      0|0:44:16       1|0:100:41
+10     121358159       rs11199044      C       A       .       PASS    AA=C;DP=142     GT:GQ:DP        1|0:100:30      0|0:44:20       1|0:100:44
+11     40156288        .       C       A       .       PASS    AA=C;DP=132     GT:GQ:DP        1|0:100:30      0|0:44:21       1|0:100:77
+16     53529659        rs6499733       G       C       .       PASS    AA=C;DP=90      GT:GQ:DP        1|0:100:30      0|0:46:21       1|0:100:36
+4      151149838       .       G       A       .       PASS    AA=G;DP=125     GT:GQ:DP        1|0:100:30      0|0:46:26       1|0:100:71
+16     6110736 rs12931102      G       T       .       PASS    AA=G;DP=92      GT:GQ:DP        1|0:100:30      0|0:47:15       1|0:100:34
+4      157932631       .       A       C       .       PASS    AA=A;DP=92      GT:GQ:DP        1|0:100:30      0|0:47:15       1|0:100:49
+17     76255143        rs4889874       G       A       .       PASS    AA=G;DP=100     GT:GQ:DP        1|0:100:30      0|0:47:15       1|0:100:55
+3      182252233       .       G       A       .       PASS    AA=G;DP=108     GT:GQ:DP        1|0:100:30      0|0:47:15       1|0:100:61
+4      67179842        .       T       C       .       PASS    AA=T;DP=109     GT:GQ:DP        1|0:100:30      0|0:47:15       1|0:100:65
+22     48399527        rs7291779       G       A       .       PASS    AA=G;DP=123     GT:GQ:DP        1|0:100:30      0|0:47:15       1|0:100:68
+8      166814  rs2003496       C       G       .       PASS    AA=.;DP=107     GT:GQ:DP        1|0:100:30      0|0:47:18       1|0:100:61
+3      134062087       rs58206304      G       A       .       PASS    AA=G;DP=121     GT:GQ:DP        1|0:100:30      0|0:49:21       1|0:100:73
+21     20321956        rs9976655       G       T       .       PASS    AA=g;DP=105     GT:GQ:DP        1|0:100:30      0|0:49:23       1|0:100:53
+12     130530318       rs10848398      C       A       .       PASS    AA=A;DP=146     GT:GQ:DP        1|0:100:30      0|0:49:31       1|0:100:86
+20     8190159 rs6140569       C       T       .       PASS    AA=T;DP=115     GT:GQ:DP        1|0:100:30      0|0:50:16       1|0:100:69
+11     37261135        .       T       G       .       PASS    AA=T;DP=115     GT:GQ:DP        1|0:100:30      0|0:50:17       1|0:100:67
+3      44780121        rs59150312      C       T       .       PASS    AA=C;DP=117     GT:GQ:DP        1|0:100:30      0|0:50:17       1|0:100:71
+9      26961556        .       G       T       .       PASS    AA=G;DP=127     GT:GQ:DP        1|0:100:30      0|0:50:17       1|0:100:76
+5      39421566        .       T       A       .       PASS    AA=T;DP=125     GT:GQ:DP        1|0:100:30      0|0:50:17       1|0:100:81
+9      16785588        rs16935071      A       T       .       PASS    AA=A;DP=92      GT:GQ:DP        1|0:100:30      0|0:50:18       1|0:100:29
+6      156507186       rs11962043      C       G       .       PASS    AA=G;DP=124     GT:GQ:DP        1|0:100:30      0|0:50:18       1|0:100:77
+19     40893933        .       G       A       .       PASS    AA=G;DP=113     GT:GQ:DP        1|0:100:30      0|0:50:22       1|0:100:55
+4      17734961        .       G       T       .       PASS    AA=g;DP=81      GT:GQ:DP        1|0:100:30      0|0:51:22       1|0:100:20
+6      165447228       rs9459297       A       G       .       PASS    AA=A;DP=88      GT:GQ:DP        1|0:100:30      0|0:53:17       1|0:100:40
+2      160224581       rs62171640      A       G       .       PASS    AA=A;DP=96      GT:GQ:DP        1|0:100:30      0|0:53:17       1|0:100:45
+2      68682195        rs7575943       T       C       .       PASS    AA=t;DP=104     GT:GQ:DP        1|0:100:30      0|0:53:17       1|0:100:57
+16     63352095        .       C       T       .       PASS    AA=C;DP=111     GT:GQ:DP        1|0:100:30      0|0:53:17       1|0:100:62
+7      10075001        rs10085731      A       G       .       PASS    AA=-;DP=109     GT:GQ:DP        1|0:100:30      0|0:53:17       1|0:100:62
+16     84225938        rs56920362      G       T       .       PASS    AA=G;DP=114     GT:GQ:DP        1|0:100:30      0|0:53:17       1|0:100:69
+19     35322687        rs335746        C       A       .       PASS    AA=C;DP=125     GT:GQ:DP        1|0:100:30      0|0:53:17       1|0:100:77
+3      61872714        .       T       A       .       PASS    AA=A;DP=93      GT:GQ:DP        1|0:100:30      0|0:53:18       1|0:100:33
+12     105502441       rs12318346      G       A       .       PASS    AA=A;DP=109     GT:GQ:DP        1|0:100:30      0|0:53:18       1|0:100:60
+8      101580166       rs58517161      C       T       .       PASS    AA=C;DP=128     GT:GQ:DP        1|0:100:30      0|0:53:18       1|0:100:82
+3      13731412        rs35619127      A       T       .       PASS    AA=a;DP=121     GT:GQ:DP        1|0:100:30      0|0:53:23       1|0:100:68
+6      81517169        rs11754772      T       G       .       PASS    AA=T;DP=110     GT:GQ:DP        1|0:100:30      0|0:54:21       1|0:100:59
+8      41745224        .       G       T       .       PASS    AA=G;DP=135     GT:GQ:DP        1|0:100:30      0|0:55:29       1|0:100:76
+9      22630932        rs670952        G       A       .       PASS    AA=G;DP=100     GT:GQ:DP        1|0:100:30      0|0:56:18       1|0:100:50
+4      163289848       rs1907757       C       T       .       PASS    AA=T;DP=99      GT:GQ:DP        1|0:100:30      0|0:56:18       1|0:100:54
+10     3225128 .       T       A       .       PASS    AA=T;DP=110     GT:GQ:DP        1|0:100:30      0|0:56:18       1|0:100:60
+1      160534343       .       C       A       .       PASS    AA=C;DP=120     GT:GQ:DP        1|0:100:30      0|0:56:18       1|0:100:73
+11     33019463        .       A       G       .       PASS    AA=A;DP=128     GT:GQ:DP        1|0:100:30      0|0:56:18       1|0:100:79
+8      23280433        rs56021311      G       C       .       PASS    AA=G;DP=123     GT:GQ:DP        1|0:100:30      0|0:56:18       1|0:100:79
+9      103112710       rs11790209      G       A       .       PASS    AA=G;DP=92      GT:GQ:DP        1|0:100:30      0|0:56:19       1|0:100:42
+2      55098042        rs17046594      A       C       .       PASS    AA=A;DP=97      GT:GQ:DP        1|0:100:30      0|0:56:19       1|0:100:47
+8      67367054        .       C       G       .       PASS    AA=C;DP=112     GT:GQ:DP        1|0:100:30      0|0:56:21       1|0:100:52
+14     87806116        rs11627829      C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        1|0:100:30      0|0:56:24       1|0:100:60
+2      150684285       .       C       T       .       PASS    AA=C;DP=95      GT:GQ:DP        1|0:100:30      0|0:57:19       1|0:100:43
+3      46752588        rs6793235       C       T       .       PASS    AA=T;DP=111     GT:GQ:DP        1|0:100:30      0|0:58:22       1|0:100:61
+7      144910816       rs17169760      T       C       .       PASS    AA=T;DP=113     GT:GQ:DP        1|0:100:30      0|0:58:25       1|0:100:61
+6      108515033       .       C       T       .       PASS    AA=C;DP=128     GT:GQ:DP        1|0:100:30      0|0:58:26       1|0:100:59
+8      3282664 .       G       C       .       PASS    AA=G;DP=105     GT:GQ:DP        1|0:100:30      0|0:59:19       1|0:100:55
+18     8235577 .       A       T       .       PASS    AA=A;DP=104     GT:GQ:DP        1|0:100:30      0|0:59:19       1|0:100:56
+6      40721440        .       G       C       .       PASS    AA=G;DP=123     GT:GQ:DP        1|0:100:30      0|0:59:19       1|0:100:73
+19     60200032        .       G       T       .       PASS    AA=T;DP=123     GT:GQ:DP        1|0:100:30      0|0:59:19       1|0:100:75
+2      70970699        .       A       G       .       PASS    AA=A;DP=127     GT:GQ:DP        1|0:100:30      0|0:59:19       1|0:100:76
+11     111987871       rs59703537      C       T       .       PASS    AA=C;DP=134     GT:GQ:DP        1|0:100:30      0|0:59:20       1|0:100:43
+14     42347409        .       A       G       .       PASS    AA=A;DP=99      GT:GQ:DP        1|0:100:30      0|0:59:21       1|0:100:49
+7      83775512        .       C       A       .       PASS    AA=C;DP=112     GT:GQ:DP        1|0:100:30      0|0:59:21       1|0:100:61
+3      21854480        rs2673527       A       G       .       PASS    AA=A;DP=114     GT:GQ:DP        1|0:100:30      0|0:59:23       1|0:100:61
+9      102542751       rs10760749      G       A       .       PASS    AA=G;DP=138     GT:GQ:DP        1|0:100:30      0|0:59:27       1|0:100:80
+12     120024023       rs1796422       C       T       .       PASS    AA=C;DP=124     GT:GQ:DP        1|0:100:30      0|0:60:25       1|0:100:66
+10     129113392       rs58569189      G       A       .       PASS    AA=G;DP=127     GT:GQ:DP        1|0:100:30      0|0:60:29       1|0:100:70
+10     110640401       .       A       C       .       PASS    AA=A;DP=132     GT:GQ:DP        1|0:100:30      0|0:60:31       1|0:100:69
+12     100835396       rs7302651       A       G       .       PASS    AA=G;DP=104     GT:GQ:DP        1|0:100:30      0|0:62:20       1|0:100:45
+3      66626326        rs13316006      T       A       .       PASS    AA=T;DP=102     GT:GQ:DP        1|0:100:30      0|0:62:20       1|0:100:50
+16     70287541        .       G       A       .       PASS    AA=G;DP=103     GT:GQ:DP        1|0:100:30      0|0:62:20       1|0:100:51
+18     73337370        .       T       C       .       PASS    AA=t;DP=104     GT:GQ:DP        1|0:100:30      0|0:62:20       1|0:100:52
+16     74580998        rs10514398      G       A       .       PASS    AA=G;DP=103     GT:GQ:DP        1|0:100:30      0|0:62:20       1|0:100:54
+15     90947164        .       C       T       .       PASS    AA=C;DP=116     GT:GQ:DP        1|0:100:30      0|0:62:20       1|0:100:66
+3      25793779        rs6795654       A       T       .       PASS    AA=A;DP=122     GT:GQ:DP        1|0:100:30      0|0:62:20       1|0:100:72
+15     44995486        rs11858275      G       C       .       PASS    AA=G;DP=99      GT:GQ:DP        1|0:100:30      0|0:62:21       1|0:100:47
+2      113704963       rs10175462      G       A       .       PASS    AA=A;DP=108     GT:GQ:DP        1|0:100:30      0|0:62:21       1|0:100:57
+15     59234935        rs12593790      A       G       .       PASS    AA=A;DP=112     GT:GQ:DP        1|0:100:30      0|0:62:21       1|0:100:59
+16     9906074 rs28396577      A       G       .       PASS    AA=A;DP=110     GT:GQ:DP        1|0:100:30      0|0:62:21       1|0:100:59
+22     25388642        rs5997111       G       A       .       PASS    AA=G;DP=112     GT:GQ:DP        1|0:100:30      0|0:62:21       1|0:100:60
+2      225508416       rs10498174      T       C       .       PASS    AA=T;DP=116     GT:GQ:DP        1|0:100:30      0|0:62:21       1|0:100:66
+2      59174000        .       A       G       .       PASS    AA=A;DP=139     GT:GQ:DP        1|0:100:30      0|0:62:21       1|0:100:82
+18     75989000        rs35925814      G       A       .       PASS    AA=A;DP=137     GT:GQ:DP        1|0:100:30      0|0:62:21       1|0:100:85
+10     13396844        rs615497        G       A       .       PASS    AA=A;DP=140     GT:GQ:DP        1|0:100:30      0|0:62:22       1|0:100:90
+13     25959516        rs7983993       C       T       .       PASS    AA=C;DP=133     GT:GQ:DP        1|0:100:30      0|0:62:23       1|0:100:43
+8      51990549        .       T       A       .       PASS    AA=T;DP=109     GT:GQ:DP        1|0:100:30      0|0:62:23       1|0:100:57
+4      181589496       rs2677002       A       T       .       PASS    AA=A;DP=127     GT:GQ:DP        1|0:100:30      0|0:63:32       1|0:100:64
+4      163517027       rs6817799       C       T       .       PASS    AA=c;DP=97      GT:GQ:DP        1|0:100:30      0|0:65:21       1|0:100:44
+1      199697698       rs6669318       A       G       .       PASS    AA=A;DP=145;HM2;HM3     GT:GQ:DP        1|0:100:30      0|0:65:21       1|0:100:50
+3      113627371       rs2683892       A       G       .       PASS    AA=A;DP=107     GT:GQ:DP        1|0:100:30      0|0:65:21       1|0:100:62
+1      44369407        .       T       C       .       PASS    AA=T;DP=116     GT:GQ:DP        1|0:100:30      0|0:65:21       1|0:100:65
+2      29871043        .       T       C       .       PASS    AA=t;DP=122     GT:GQ:DP        1|0:100:30      0|0:65:21       1|0:100:75
+10     7902458 rs56822953      T       C       .       PASS    AA=T;DP=126     GT:GQ:DP        1|0:100:30      0|0:65:21       1|0:100:76
+7      133446993       .       T       C       .       PASS    AA=C;DP=142     GT:GQ:DP        1|0:100:30      0|0:65:22       1|0:100:51
+18     73964596        rs2135096       C       T       .       PASS    AA=C;DP=124     GT:GQ:DP        1|0:100:30      0|0:65:22       1|0:100:72
+11     130719612       rs11820912      T       C       .       PASS    AA=T;DP=144     GT:GQ:DP        1|0:100:30      0|0:65:23       1|0:100:44
+1      5495108 rs12134185      T       C       .       PASS    AA=T;DP=121;HM2 GT:GQ:DP        1|0:100:30      0|0:65:23       1|0:100:68
+3      116723643       rs1499942       A       G       .       PASS    AA=A;DP=115     GT:GQ:DP        1|0:100:30      0|0:65:24       1|0:100:61
+15     81284267        rs55994896      G       T       .       PASS    AA=g;DP=129     GT:GQ:DP        1|0:100:30      0|0:65:27       1|0:100:71
+16     49475497        .       A       G       .       PASS    AA=A;DP=138     GT:GQ:DP        1|0:100:30      0|0:67:22       1|0:100:45
+8      61664106        .       T       A       .       PASS    AA=T;DP=106     GT:GQ:DP        1|0:100:30      0|0:68:22       1|0:100:52
+20     47960112        rs8125607       G       A       .       PASS    AA=G;DP=134     GT:GQ:DP        1|0:100:30      0|0:68:22       1|0:100:68
+4      186531278       rs3797027       T       C       .       PASS    AA=T;DP=123     GT:GQ:DP        1|0:100:30      0|0:68:22       1|0:100:72
+4      159470679       rs10016765      G       A       .       PASS    AA=A;DP=143     GT:GQ:DP        1|0:100:30      0|0:68:23       1|0:100:48
+16     79778419        .       C       G       .       PASS    AA=c;DP=114     GT:GQ:DP        1|0:100:30      0|0:68:23       1|0:100:61
+4      102573132       .       A       G       .       PASS    AA=G;DP=118     GT:GQ:DP        1|0:100:30      0|0:68:23       1|0:100:62
+8      125535748       rs61000981      G       A       .       PASS    AA=G;DP=123     GT:GQ:DP        1|0:100:30      0|0:68:23       1|0:100:69
+2      220191392       rs60367085      C       T       .       PASS    AA=C;DP=131     GT:GQ:DP        1|0:100:30      0|0:68:23       1|0:100:77
+5      118789146       rs61645108      G       A       .       PASS    AA=G;DP=135     GT:GQ:DP        1|0:100:30      0|0:68:23       1|0:100:80
+13     101390551       rs16959479      A       G       .       PASS    AA=A;DP=143     GT:GQ:DP        1|0:100:30      0|0:68:23       1|0:100:88
+2      133257892       rs61746887      T       A       .       PASS    AA=T;DP=111     GT:GQ:DP        1|0:100:30      0|0:68:24       1|0:100:59
+9      2499589 rs4741723       G       A       .       PASS    AA=A;DP=108     GT:GQ:DP        1|0:100:30      0|0:68:25       1|0:100:53
+12     19896757        rs1352900       C       T       .       PASS    AA=T;DP=145     GT:GQ:DP        1|0:100:30      0|0:70:30       1|0:100:39
+1      63323109        .       C       G       .       PASS    AA=C;DP=105     GT:GQ:DP        1|0:100:30      0|0:71:23       1|0:100:40
+4      71195298        .       A       C       .       PASS    AA=A;DP=103     GT:GQ:DP        1|0:100:30      0|0:71:23       1|0:100:51
+1      42317985        .       C       T       .       PASS    AA=C;DP=131     GT:GQ:DP        1|0:100:30      0|0:71:23       1|0:100:64
+21     23354342        .       A       G       .       PASS    AA=A;DP=118     GT:GQ:DP        1|0:100:30      0|0:71:23       1|0:100:64
+17     70116386        rs563299        G       A       .       PASS    AA=G;DP=122     GT:GQ:DP        1|0:100:30      0|0:71:23       1|0:100:68
+3      61044448        .       A       G       .       PASS    AA=A;DP=124     GT:GQ:DP        1|0:100:30      0|0:71:23       1|0:100:72
+5      100728238       rs10072890      A       G       .       PASS    AA=T;DP=127     GT:GQ:DP        1|0:100:30      0|0:71:23       1|0:100:72
+4      106267476       .       T       C       .       PASS    AA=T;DP=127     GT:GQ:DP        1|0:100:30      0|0:71:23       1|0:100:74
+2      67774541        rs10169649      T       A       .       PASS    AA=T;DP=130     GT:GQ:DP        1|0:100:30      0|0:71:23       1|0:100:77
+4      14189845        .       C       G       .       PASS    AA=C;DP=131     GT:GQ:DP        1|0:100:30      0|0:71:23       1|0:100:78
+6      110973266       .       G       A       .       PASS    AA=G;DP=137     GT:GQ:DP        1|0:100:30      0|0:71:23       1|0:100:87
+22     48037983        .       C       A       .       PASS    AA=c;DP=140     GT:GQ:DP        1|0:100:30      0|0:71:23       1|0:100:88
+4      5957901 .       A       G       .       PASS    AA=A;DP=144     GT:GQ:DP        1|0:100:30      0|0:71:23       1|0:100:90
+4      11381560        .       G       C       .       PASS    AA=G;DP=128     GT:GQ:DP        1|0:100:30      0|0:71:24       1|0:100:76
+16     51597638        rs12446486      A       T       .       PASS    AA=A;DP=131     GT:GQ:DP        1|0:100:30      0|0:71:24       1|0:100:78
+X      2336060 .       T       C       .       PASS    AA=t;DP=97      GT:GQ:DP        1|0:100:30      0|0:71:25       1|0:100:36
+4      164743603       rs2320897       C       T       .       PASS    AA=C;DP=114     GT:GQ:DP        1|0:100:30      0|0:71:25       1|0:100:47
+7      67029468        rs11978860      G       A       .       PASS    AA=A;DP=124     GT:GQ:DP        1|0:100:30      0|0:71:25       1|0:100:66
+17     8212530 rs55728196      C       T       .       PASS    AA=c;DP=125     GT:GQ:DP        1|0:100:30      0|0:71:25       1|0:100:70
+13     30916335        rs17076131      G       A       .       PASS    AA=A;DP=115     GT:GQ:DP        1|0:100:30      0|0:71:26       1|0:100:61
+7      123990380       rs9641738       C       A       .       PASS    AA=C;DP=125     GT:GQ:DP        1|0:100:30      0|0:71:29       1|0:100:66
+12     99831843        rs12312569      G       A       .       PASS    AA=g;DP=129     GT:GQ:DP        1|0:100:30      0|0:71:31       1|0:100:70
+15     74691665        .       C       G       .       PASS    AA=C;DP=125     GT:GQ:DP        1|0:100:30      0|0:72:29       1|0:100:63
+2      191842227       rs13427761      C       G       .       PASS    AA=G;DP=142     GT:GQ:DP        1|0:100:30      0|0:74:24       1|0:100:44
+10     79779631        rs749163        G       A       .       PASS    AA=G;DP=141     GT:GQ:DP        1|0:100:30      0|0:74:24       1|0:100:45
+3      89657199        rs59907090      G       A       .       PASS    AA=G;DP=99      GT:GQ:DP        1|0:100:30      0|0:74:24       1|0:100:46
+15     98259058        .       T       C       .       PASS    AA=T;DP=105     GT:GQ:DP        1|0:100:30      0|0:74:24       1|0:100:53
+3      22750052        .       A       G       .       PASS    AA=A;DP=113     GT:GQ:DP        1|0:100:30      0|0:74:24       1|0:100:59
+15     65372741        rs8040514       G       T       .       PASS    AA=G;DP=138     GT:GQ:DP        1|0:100:30      0|0:74:24       1|0:100:64
+5      172620034       .       C       T       .       PASS    AA=C;DP=129     GT:GQ:DP        1|0:100:30      0|0:74:24       1|0:100:74
+2      153996352       rs59140871      C       T       .       PASS    AA=C;DP=146     GT:GQ:DP        1|0:100:30      0|0:74:24       1|0:100:77
+18     43367045        .       A       G       .       PASS    AA=A;DP=111     GT:GQ:DP        1|0:100:30      0|0:74:25       1|0:100:57
+6      13168194        rs4711908       A       G       .       PASS    AA=G;DP=113     GT:GQ:DP        1|0:100:30      0|0:74:25       1|0:100:58
+8      58885361        rs59800032      C       T       .       PASS    AA=C;DP=116     GT:GQ:DP        1|0:100:30      0|0:74:25       1|0:100:61
+10     43787191        rs7904114       A       G       .       PASS    AA=G;DP=127     GT:GQ:DP        1|0:100:30      0|0:74:25       1|0:100:72
+13     112173079       .       T       C       .       PASS    AA=T;DP=130     GT:GQ:DP        1|0:100:30      0|0:74:25       1|0:100:75
+2      118094151       rs10439400      A       C       .       PASS    AA=A;DP=132     GT:GQ:DP        1|0:100:30      0|0:74:25       1|0:100:77
+3      129682070       rs3803  G       A       .       PASS    AA=G;DP=133     GT:GQ:DP        1|0:100:30      0|0:74:25       1|0:100:82
+2      237886491       rs56123431      A       G       .       PASS    AA=A;DP=140     GT:GQ:DP        1|0:100:30      0|0:74:25       1|0:100:89
+5      19171682        rs13168107      T       C       .       PASS    AA=T;DP=124     GT:GQ:DP        1|0:100:30      0|0:74:26       1|0:100:69
+3      101939096       rs9809520       G       A       .       PASS    AA=A;DP=125     GT:GQ:DP        1|0:100:30      0|0:74:26       1|0:100:73
+13     69287444        rs56337520      G       A       .       PASS    AA=G;DP=129     GT:GQ:DP        1|0:100:30      0|0:74:31       1|0:100:66
+10     93558898        .       A       G       .       PASS    AA=A;DP=108     GT:GQ:DP        1|0:100:30      0|0:77:25       1|0:100:44
+1      65029183        rs61399651      C       A       .       PASS    AA=C;DP=120     GT:GQ:DP        1|0:100:30      0|0:77:25       1|0:100:60
+8      85437763        .       T       C       .       PASS    AA=T;DP=116     GT:GQ:DP        1|0:100:30      0|0:77:25       1|0:100:62
+10     102916068       rs17113768      G       A       .       PASS    AA=g;DP=117     GT:GQ:DP        1|0:100:30      0|0:77:25       1|0:100:63
+17     33902029        rs10852948      A       G       .       PASS    AA=N;DP=137     GT:GQ:DP        1|0:100:30      0|0:77:25       1|0:100:77
+17     20765360        rs60606678      T       A       .       PASS    AA=T;DP=131     GT:GQ:DP        1|0:100:30      0|0:77:25       1|0:100:79
+10     98498311        rs12571935      G       A       .       PASS    AA=G;DP=133     GT:GQ:DP        1|0:100:30      0|0:77:26       1|0:100:76
+6      165886374       rs7758026       C       G       .       PASS    AA=G;DP=139     GT:GQ:DP        1|0:100:30      0|0:77:26       1|0:100:84
+7      106267885       rs42168 C       T       .       PASS    AA=C;DP=146     GT:GQ:DP        1|0:100:30      0|0:80:26       1|0:100:45
+7      64537225        rs6973421       C       G       .       PASS    AA=N;DP=154     GT:GQ:DP        1|0:100:30      0|0:80:26       1|0:100:52
+15     59105750        .       C       T       .       PASS    AA=C;DP=109     GT:GQ:DP        1|0:100:30      0|0:80:26       1|0:100:55
+11     76783562        rs10466737      T       C       .       PASS    AA=T;DP=118     GT:GQ:DP        1|0:100:30      0|0:80:26       1|0:100:60
+11     102544059       rs12272539      C       T       .       PASS    AA=C;DP=123     GT:GQ:DP        1|0:100:30      0|0:80:26       1|0:100:65
+19     57407320        .       T       G       .       PASS    AA=T;DP=124     GT:GQ:DP        1|0:100:30      0|0:80:26       1|0:100:67
+4      163803635       .       C       A       .       PASS    AA=C;DP=132     GT:GQ:DP        1|0:100:30      0|0:80:26       1|0:100:75
+6      130094686       rs7744417       A       G       .       PASS    AA=A;DP=132     GT:GQ:DP        1|0:100:30      0|0:80:26       1|0:100:77
+18     55508397        rs2331724       T       C       .       PASS    AA=C;DP=134     GT:GQ:DP        1|0:100:30      0|0:80:26       1|0:100:78
+4      117200368       .       G       T       .       PASS    AA=G;DP=134     GT:GQ:DP        1|0:100:30      0|0:80:26       1|0:100:78
+18     7965518 .       A       G       .       PASS    AA=G;DP=135     GT:GQ:DP        1|0:100:30      0|0:80:26       1|0:100:79
+2      177573183       rs6433631       G       A       .       PASS    AA=A;DP=160     GT:GQ:DP        1|0:100:30      0|0:80:26       1|0:100:89
+15     58107282        .       T       C       .       PASS    AA=T;DP=125     GT:GQ:DP        1|0:100:30      0|0:80:27       1|0:100:64
+11     110605320       rs10891232      T       C       .       PASS    AA=T;DP=124     GT:GQ:DP        1|0:100:30      0|0:80:27       1|0:100:67
+10     99081986        .       T       C       .       PASS    AA=t;DP=132     GT:GQ:DP        1|0:100:30      0|0:80:27       1|0:100:76
+16     76274338        .       G       A       .       PASS    AA=G;DP=136     GT:GQ:DP        1|0:100:30      0|0:80:27       1|0:100:79
+6      68773672        .       A       G       .       PASS    AA=A;DP=149     GT:GQ:DP        1|0:100:30      0|0:80:27       1|0:100:93
+9      3620564 .       C       T       .       PASS    AA=C;DP=122     GT:GQ:DP        1|0:100:30      0|0:80:28       1|0:100:62
+7      16248928        rs4721484       A       T       .       PASS    AA=A;DP=96      GT:GQ:DP        1|0:100:30      0|0:80:30       1|0:100:30
+13     50578461        rs57634238      C       T       .       PASS    AA=c;DP=115     GT:GQ:DP        1|0:100:30      0|0:83:27       1|0:100:56
+9      23335636        rs28889142      C       A       .       PASS    AA=C;DP=119     GT:GQ:DP        1|0:100:30      0|0:83:27       1|0:100:62
+4      63894610        rs58901575      G       A       .       PASS    AA=.;DP=123     GT:GQ:DP        1|0:100:30      0|0:83:27       1|0:100:65
+6      155666695       .       A       G       .       PASS    AA=A;DP=125     GT:GQ:DP        1|0:100:30      0|0:83:27       1|0:100:67
+2      79872795        .       T       C       .       PASS    AA=C;DP=125     GT:GQ:DP        1|0:100:30      0|0:83:27       1|0:100:68
+16     75695919        rs3913562       G       A       .       PASS    AA=G;DP=131     GT:GQ:DP        1|0:100:30      0|0:83:27       1|0:100:70
+2      36400807        .       T       C       .       PASS    AA=C;DP=125     GT:GQ:DP        1|0:100:30      0|0:83:27       1|0:100:70
+4      11576099        .       G       A       .       PASS    AA=G;DP=158     GT:GQ:DP        1|0:100:30      0|0:83:28       1|0:100:100
+2      7969259 .       C       T       .       PASS    AA=C;DP=112     GT:GQ:DP        1|0:100:30      0|0:83:28       1|0:100:54
+6      39518242        .       G       A       .       PASS    AA=G;DP=124     GT:GQ:DP        1|0:100:30      0|0:83:28       1|0:100:65
+17     17873510        .       G       A       .       PASS    AA=G;DP=130     GT:GQ:DP        1|0:100:30      0|0:83:28       1|0:100:73
+5      99334473        rs2927418       C       T       .       PASS    AA=C;DP=119     GT:GQ:DP        1|0:100:30      0|0:83:29       1|0:100:60
+8      70117880        rs13269711      G       A       .       PASS    AA=G;DP=124     GT:GQ:DP        1|0:100:30      0|0:83:29       1|0:100:65
+18     41256174        rs9950296       C       G       .       PASS    AA=G;DP=140     GT:GQ:DP        1|0:100:30      0|0:83:29       1|0:100:76
+11     76979740        .       A       T       .       PASS    AA=A;DP=139     GT:GQ:DP        1|0:100:30      0|0:84:34       1|0:100:75
+3      42558055        rs171057        C       T       .       PASS    AA=C;DP=150     GT:GQ:DP        1|0:100:30      0|0:84:35       1|0:100:87
+19     41709460        rs4561584       C       T       .       PASS    AA=T;DP=120     GT:GQ:DP        1|0:100:30      0|0:86:28       1|0:100:47
+6      75345819        .       C       T       .       PASS    AA=C;DP=131     GT:GQ:DP        1|0:100:30      0|0:86:28       1|0:100:75
+14     84179304        rs7140320       T       A       .       PASS    AA=A;DP=128     GT:GQ:DP        1|0:100:30      0|0:86:29       1|0:100:70
+12     67581946        rs1566305       G       A       .       PASS    AA=G;DP=146     GT:GQ:DP        1|0:100:30      0|0:86:30       1|0:100:86
+8      106996044       rs12676365      G       A       .       PASS    AA=G;DP=140     GT:GQ:DP        1|0:100:30      0|0:89:29       1|0:100:31
+14     87533141        rs8003806       C       A       .       PASS    AA=A;DP=115     GT:GQ:DP        1|0:100:30      0|0:89:29       1|0:100:56
+8      69980568        rs11990566      G       C       .       PASS    AA=g;DP=127     GT:GQ:DP        1|0:100:30      0|0:89:29       1|0:100:68
+6      18250961        .       G       A       .       PASS    AA=G;DP=134     GT:GQ:DP        1|0:100:30      0|0:89:29       1|0:100:74
+11     132053540       .       C       T       .       PASS    AA=C;DP=136     GT:GQ:DP        1|0:100:30      0|0:89:29       1|0:100:75
+2      102253560       rs11674302      T       C       .       PASS    AA=T;DP=133     GT:GQ:DP        1|0:100:30      0|0:89:29       1|0:100:78
+10     82350025        .       A       G       .       PASS    AA=A;DP=151     GT:GQ:DP        1|0:100:30      0|0:89:30       1|0:100:49
+13     34317264        rs9529808       A       G       .       PASS    AA=A;DP=151     GT:GQ:DP        1|0:100:30      0|0:89:30       1|0:100:49
+16     6317974 rs17821828      G       T       .       PASS    AA=g;DP=114     GT:GQ:DP        1|0:100:30      0|0:92:30       1|0:100:54
+14     68842840        .       C       T       .       PASS    AA=C;DP=119     GT:GQ:DP        1|0:100:30      0|0:92:30       1|0:100:58
+14     88341087        .       T       A       .       PASS    AA=T;DP=122     GT:GQ:DP        1|0:100:30      0|0:92:30       1|0:100:61
+17     3301184 rs1948173       A       G       .       PASS    AA=A;DP=123     GT:GQ:DP        1|0:100:30      0|0:92:30       1|0:100:63
+2      124550006       rs1816698       G       T       .       PASS    AA=G;DP=132     GT:GQ:DP        1|0:100:30      0|0:92:30       1|0:100:72
+18     45243364        rs10853579      C       T       .       PASS    AA=T;DP=107     GT:GQ:DP        1|0:100:30      0|0:92:31       1|0:100:37
+11     133031869       rs11603232      A       G       .       PASS    AA=A;DP=144     GT:GQ:DP        1|0:100:30      0|0:92:31       1|0:100:43
+8      9245063 .       C       A       .       PASS    AA=C;DP=123     GT:GQ:DP        1|0:100:30      0|0:92:31       1|0:100:59
+12     107387095       .       C       T       .       PASS    AA=C;DP=131     GT:GQ:DP        1|0:100:30      0|0:92:33       1|0:100:68
+3      109604120       rs13090812      T       G       .       PASS    AA=T;DP=152     GT:GQ:DP        1|0:100:30      0|0:94:31       1|0:100:91
+10     28819519        .       C       T       .       PASS    AA=C;DP=123     GT:GQ:DP        1|0:100:30      0|0:95:31       1|0:100:61
+1      105536525       rs10881272      T       C       .       PASS    AA=C;DP=128;HM2 GT:GQ:DP        1|0:100:30      0|0:95:31       1|0:100:69
+10     110894545       rs10884700      A       C       .       PASS    AA=C;DP=155     GT:GQ:DP        1|0:100:30      0|0:95:32       1|0:100:90
+13     106937655       rs9514691       T       C       .       PASS    AA=T;DP=126     GT:GQ:DP        1|0:100:30      0|0:95:33       1|0:100:62
+4      97876956        rs1922835       A       G       .       PASS    AA=G;DP=114     GT:GQ:DP        1|0:100:30      0|0:98:32       1|0:100:54
+10     9460362 .       T       C       .       PASS    AA=t;DP=135     GT:GQ:DP        1|0:100:30      0|0:98:32       1|0:100:71
+1      110418202       rs4838890       C       T       .       PASS    AA=C;DP=122;HM2;HM3     GT:GQ:DP        1|0:100:30      0|0:98:33       1|0:100:59
+11     102049239       .       A       G       .       PASS    AA=A;DP=122     GT:GQ:DP        1|0:100:30      0|0:98:33       1|0:100:60
+9      110170929       rs59905969      G       A       .       PASS    AA=G;DP=136     GT:GQ:DP        1|0:100:30      0|0:99:38       1|0:100:65
+3      153758953       rs6777044       G       T       .       PASS    AA=c;DP=105     GT:GQ:DP        1|0:100:30      1|0:100:16      1|1:100:58
+6      37386729        rs59078138      T       C       .       PASS    AA=T;DP=117     GT:GQ:DP        1|0:100:30      1|0:100:16      1|1:100:70
+4      42307566        rs7693893       A       C       .       PASS    AA=A;DP=96      GT:GQ:DP        1|0:100:30      1|0:100:17      1|1:100:40
+4      185364188       rs2310000       A       T       .       PASS    AA=A;DP=130     GT:GQ:DP        1|0:100:30      1|0:100:17      1|1:100:83
+1      243190795       rs6679132       T       C       .       PASS    AA=T;DP=103     GT:GQ:DP        1|0:100:30      1|0:100:19      1|1:100:51
+16     6996715 rs8049670       G       A       .       PASS    AA=A;DP=116     GT:GQ:DP        1|0:100:30      1|0:100:19      1|1:100:66
+5      51862483        rs7720011       C       T       .       PASS    AA=T;DP=96      GT:GQ:DP        1|0:100:30      1|0:100:20      1|1:100:48
+3      120223671       rs7623832       A       G       .       PASS    AA=A;DP=94      GT:GQ:DP        1|0:100:30      1|0:100:21      1|1:100:43
+21     27143686        rs9981200       A       G       .       PASS    AA=A;DP=105     GT:GQ:DP        1|0:100:30      1|0:100:21      1|1:100:51
+8      108752070       rs7017488       C       T       .       PASS    AA=C;DP=116     GT:GQ:DP        1|0:100:30      1|0:100:21      1|1:100:65
+1      4267442 rs12075294      A       G       .       PASS    AA=A;DP=119;HM2 GT:GQ:DP        1|0:100:30      1|0:100:21      1|1:100:68
+5      35482570        rs4703403       G       A       .       PASS    AA=g;DP=104     GT:GQ:DP        1|0:100:30      1|0:100:21      1|1:83:54
+10     133325222       rs11156541      T       C       .       PASS    AA=t;DP=95      GT:GQ:DP        1|0:100:30      1|0:100:21      1|1:99:41
+6      15821852        rs13200381      C       T       .       PASS    AA=T;DP=103     GT:GQ:DP        1|0:100:30      1|0:100:22      1|1:100:40
+11     79890696        rs2198258       A       T       .       PASS    AA=A;DP=116     GT:GQ:DP        1|0:100:30      1|0:100:22      1|1:100:64
+7      54877149        rs2330764       T       C       .       PASS    AA=C;DP=95      GT:GQ:DP        1|0:100:30      1|0:100:23      1|1:100:40
+7      81706201        rs10275727      C       A       .       PASS    AA=c;DP=99      GT:GQ:DP        1|0:100:30      1|0:100:23      1|1:100:44
+12     112880690       .       T       C       .       PASS    AA=T;DP=126     GT:GQ:DP        1|0:100:30      1|0:100:23      1|1:100:61
+22     33791338        rs362214        A       G       .       PASS    AA=G;DP=130     GT:GQ:DP        1|0:100:30      1|0:100:23      1|1:100:76
+1      110062672       rs58552265      C       T       .       PASS    AA=c;DP=145     GT:GQ:DP        1|0:100:30      1|0:100:23      1|1:100:91
+12     94720136        rs11108272      T       C       .       PASS    AA=T;DP=105     GT:GQ:DP        1|0:100:30      1|0:100:23      1|1:76:37
+16     79725139        rs11645009      T       C       .       PASS    AA=T;DP=130     GT:GQ:DP        1|0:100:30      1|0:100:23      1|1:87:31
+15     50796744        rs4617798       A       G       .       PASS    AA=A;DP=159     GT:GQ:DP        1|0:100:30      1|0:100:24      1|1:100:106
+15     40959587        .       T       C       .       PASS    AA=T;DP=105     GT:GQ:DP        1|0:100:30      1|0:100:24      1|1:100:51
+1      241729396       rs10927029      T       C       .       PASS    AA=T;DP=110;HM3 GT:GQ:DP        1|0:100:30      1|0:100:24      1|1:100:56
+10     72449150        rs4293054       T       C       .       PASS    AA=t;DP=136     GT:GQ:DP        1|0:100:30      1|0:100:24      1|1:100:81
+5      174616015       rs56057437      G       C       .       PASS    AA=C;DP=114     GT:GQ:DP        1|0:100:30      1|0:100:25      1|1:100:59
+8      1506078 rs2906590       T       C       .       PASS    AA=T;DP=115     GT:GQ:DP        1|0:100:30      1|0:100:25      1|1:100:63
+5      56312804        rs61185973      A       G       .       PASS    AA=A;DP=127     GT:GQ:DP        1|0:100:30      1|0:100:25      1|1:100:73
+6      32756315        rs9275062       T       C       .       PASS    AA=N;DP=108     GT:GQ:DP        1|0:100:30      1|0:100:25      1|1:73:54
+10     26145858        rs58634457      T       C       .       PASS    AA=T;DP=112     GT:GQ:DP        1|0:100:30      1|0:100:26      1|1:100:47
+1      62927937        rs10889356      G       A       .       PASS    AA=G;DP=134     GT:GQ:DP        1|0:100:30      1|0:100:26      1|1:100:78
+7      145059735       rs10252370      T       C       .       PASS    AA=C;DP=96      GT:GQ:DP        1|0:100:30      1|0:100:26      1|1:84:41
+18     52912690        rs6566856       C       T       .       PASS    AA=T;DP=123     GT:GQ:DP        1|0:100:30      1|0:100:27      1|1:100:64
+6      97549538        rs7758548       G       A       .       PASS    AA=G;DP=118     GT:GQ:DP        1|0:100:30      1|0:100:28      1|1:100:60
+3      151215986       rs724876        T       C       .       PASS    AA=T;DP=123     GT:GQ:DP        1|0:100:30      1|0:100:28      1|1:100:67
+18     41006176        .       C       T       .       PASS    AA=C;DP=151     GT:GQ:DP        1|0:100:30      1|0:100:28      1|1:100:96
+1      104363011       rs11185362      G       A       .       PASS    AA=-;DP=165;HM2;HM3     GT:GQ:DP        1|0:100:30      1|0:100:31      1|1:100:102
+2      86175059        rs10176454      A       C       .       PASS    AA=C;DP=128     GT:GQ:DP        1|0:100:30      1|0:100:31      1|1:100:53
+22     45869847        rs5766669       C       G       .       PASS    AA=C;DP=126     GT:GQ:DP        1|0:100:30      1|0:100:31      1|1:100:53
+7      34189457        .       A       G       .       PASS    AA=A;DP=135     GT:GQ:DP        1|0:100:30      1|0:100:31      1|1:100:76
+3      150165364       .       G       A       .       PASS    AA=G;DP=121     GT:GQ:DP        1|0:100:30      1|0:100:32      1|1:100:60
+13     37732993        rs9532190       T       G       .       PASS    AA=T;DP=125     GT:GQ:DP        1|0:100:30      1|0:100:32      1|1:100:67
+2      36894279        rs62132505      G       T       .       PASS    AA=G;DP=148     GT:GQ:DP        1|0:100:30      1|0:100:32      1|1:100:90
+1      90382878        rs4130212       C       T       .       PASS    AA=T;DP=129;HM2 GT:GQ:DP        1|0:100:30      1|0:100:33      1|1:100:65
+3      53126040        rs60993884      G       T       .       PASS    AA=G;DP=137     GT:GQ:DP        1|0:100:30      1|0:100:33      1|1:100:72
+6      119362533       rs794265        A       T       .       PASS    AA=A;DP=124     GT:GQ:DP        1|0:100:30      1|0:100:34      1|1:100:60
+18     22274063        rs12969033      T       C       .       PASS    AA=C;DP=133     GT:GQ:DP        1|0:100:30      1|0:100:34      1|1:100:70
+13     30211889        rs9315045       T       C       .       PASS    AA=C;DP=152     GT:GQ:DP        1|0:100:30      1|0:100:35      1|1:100:85
+11     93216685        rs755071        A       C       .       PASS    AA=C;DP=133     GT:GQ:DP        1|0:100:30      1|0:100:37      1|1:100:64
+16     83429294        rs4782672       G       C       .       PASS    AA=C;DP=121     GT:GQ:DP        1|0:100:30      1|0:20:19       1|1:100:76
+3      4243540 rs6772671       A       T       .       PASS    AA=A;DP=130     GT:GQ:DP        1|0:100:30      1|0:42:12       1|1:100:86
+10     100158063       .       G       A       .       PASS    AA=G;DP=120     GT:GQ:DP        1|0:100:30      1|0:43:14       1|1:100:60
+3      108928992       rs6763306       C       T       .       PASS    AA=C;DP=113     GT:GQ:DP        1|0:100:30      1|0:45:19       1|1:100:62
+5      171455229       .       C       T       .       PASS    AA=C;DP=117     GT:GQ:DP        1|0:100:30      1|0:51:18       1|1:100:71
+22     48748495        rs62231879      C       A       .       PASS    AA=c;DP=123     GT:GQ:DP        1|0:100:30      1|0:56:11       1|1:100:75
+5      11105023        rs1948752       C       T       .       PASS    AA=c;DP=113     GT:GQ:DP        1|0:100:30      1|0:62:17       1|1:100:66
+20     24888467        rs6106979       C       G       .       PASS    AA=C;DP=101     GT:GQ:DP        1|0:100:30      1|0:74:10       1|1:100:58
+6      68632270        rs9346082       C       A       .       PASS    AA=c;DP=102     GT:GQ:DP        1|0:100:30      1|0:77:15       1|1:100:57
+13     26324073        rs2209859       G       A       .       PASS    AA=g;DP=100     GT:GQ:DP        1|0:100:30      1|0:83:15       1|1:100:55
+1      201422837       rs57655006      T       C       .       PASS    AA=T;DP=117     GT:GQ:DP        1|0:100:30      1|0:83:15       1|1:100:73
+8      130156569       rs34871599      G       A       .       PASS    AA=G;DP=129     GT:GQ:DP        1|0:100:30      1|0:84:22       1|1:100:77
+15     99880312        rs28676972      C       G       .       PASS    AA=G;DP=111     GT:GQ:DP        1|0:100:30      1|0:85:23       1|1:40:58
+6      4533462 .       G       A       .       PASS    AA=G;DP=118     GT:GQ:DP        1|0:100:30      1|0:87:20       1|1:100:68
+3      196056803       .       C       A       .       PASS    AA=C;DP=117     GT:GQ:DP        1|0:100:30      1|0:88:13       1|1:100:76
+6      12118806        rs749446        C       A       .       PASS    AA=A;DP=132     GT:GQ:DP        1|0:100:30      1|0:89:37       1|1:100:66
+9      34988003        rs9608  G       A       .       PASS    AA=G;DP=116     GT:GQ:DP        1|0:100:30      1|0:90:19       1|1:100:68
+6      107548428       .       A       T       .       PASS    AA=A;DP=100     GT:GQ:DP        1|0:100:30      1|0:90:20       1|1:100:50
+8      132781679       rs17556006      C       T       .       PASS    AA=C;DP=144     GT:GQ:DP        1|0:100:30      1|0:92:29       1|1:100:86
+7      80533764        rs1881541       C       T       .       PASS    AA=C;DP=93      GT:GQ:DP        1|0:100:30      1|0:94:19       1|1:100:35
+11     134174889       rs10750581      A       G       .       PASS    AA=G;DP=105     GT:GQ:DP        1|0:100:30      1|0:95:19       1|1:100:54
+1      246015515       rs55697060      C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        1|0:100:30      1|0:95:28       1|1:94:62
+10     49359474        .       T       C       .       PASS    AA=T;DP=121     GT:GQ:DP        1|0:100:30      1|0:97:18       1|1:100:70
+9      4500509 rs35815316      A       G       .       PASS    AA=A;DP=153     GT:GQ:DP        1|0:100:30      1|0:98:22       1|1:100:57
+6      168917707       .       C       T       .       PASS    AA=T;DP=144     GT:GQ:DP        1|0:100:30      1|1:100:37      1|1:100:74
+8      141708810       rs7004365       G       A       .       PASS    AA=G;DP=114     GT:GQ:DP        1|0:100:30      1|1:15:5        1|1:100:84
+5      14678490        rs10065449      T       G       .       PASS    AA=G;DP=122     GT:GQ:DP        1|0:100:30      1|1:20:19       1|1:100:74
+11     44944085        rs7944029       C       G       .       PASS    AA=G;DP=98      GT:GQ:DP        1|0:100:30      1|1:26:13       1|1:100:58
+5      175007909       rs629669        A       G       .       PASS    AA=N;DP=89      GT:GQ:DP        1|0:100:30      1|1:27:12       1|1:100:36
+9      7842471 rs7042604       G       A       .       PASS    AA=G;DP=105     GT:GQ:DP        1|0:100:30      1|1:27:20       1|1:83:56
+1      204493121       rs28410805      A       G       .       PASS    AA=a;DP=107;HM3 GT:GQ:DP        1|0:100:30      1|1:28:15       1|1:100:62
+13     42891579        rs2031357       C       G       .       PASS    AA=G;DP=104     GT:GQ:DP        1|0:100:30      1|1:28:22       1|1:88:45
+16     50223917        rs1909334       T       A       .       PASS    AA=A;DP=110     GT:GQ:DP        1|0:100:30      1|1:29:15       1|1:100:62
+9      127203268       rs2648318       T       C       .       PASS    AA=C;DP=101     GT:GQ:DP        1|0:100:30      1|1:30:11       1|1:100:51
+14     94430867        rs1741235       T       A       .       PASS    AA=A;DP=114     GT:GQ:DP        1|0:100:30      1|1:35:20       1|1:100:64
+1      199200219       .       T       C       .       PASS    AA=T;DP=125;HM2 GT:GQ:DP        1|0:100:30      1|1:36:13       1|1:100:81
+4      178665719       rs4047775       A       G       .       PASS    AA=G;DP=109     GT:GQ:DP        1|0:100:30      1|1:36:23       1|1:100:56
+3      180629546       rs13327561      C       A       .       PASS    AA=A;DP=95      GT:GQ:DP        1|0:100:30      1|1:39:13       1|1:90:41
+9      16846367        rs7047512       T       C       .       PASS    AA=T;DP=102     GT:GQ:DP        1|0:100:30      1|1:39:14       1|1:100:59
+17     54856110        rs758380        C       G       .       PASS    AA=C;DP=105     GT:GQ:DP        1|0:100:30      1|1:40:18       1|1:100:57
+3      101026454       rs793475        A       G       .       PASS    AA=A;DP=112     GT:GQ:DP        1|0:100:30      1|1:42:16       1|1:100:45
+7      34721653        .       G       T       .       PASS    AA=G;DP=141     GT:GQ:DP        1|0:100:30      1|1:44:20       1|1:100:93
+11     57701455        rs2513716       T       C       .       PASS    AA=C;DP=104     GT:GQ:DP        1|0:100:30      1|1:45:15       1|1:100:57
+22     18249210        rs34820460      G       A       .       PASS    AA=G;DP=111     GT:GQ:DP        1|0:100:30      1|1:45:16       1|1:100:63
+7      29161692        .       C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        1|0:100:30      1|1:45:16       1|1:100:75
+10     130935150       rs482817        C       T       .       PASS    AA=T;DP=110     GT:GQ:DP        1|0:100:30      1|1:48:16       1|1:100:62
+19     62207039        rs8104866       G       C       .       PASS    AA=g;DP=101     GT:GQ:DP        1|0:100:30      1|1:48:17       1|1:100:44
+2      1292227 rs59675517      T       G       .       PASS    AA=G;DP=98      GT:GQ:DP        1|0:100:30      1|1:48:22       1|1:100:46
+3      98887302        rs719278        G       A       .       PASS    AA=G;DP=132     GT:GQ:DP        1|0:100:30      1|1:50:28       1|1:100:71
+6      30861125        rs4713360       A       G       .       PASS    AA=a;DP=141     GT:GQ:DP        1|0:100:30      1|1:50:28       1|1:100:86
+1      189656021       rs664443        G       A       .       PASS    AA=A;DP=129     GT:GQ:DP        1|0:100:30      1|1:51:18       1|1:100:83
+7      40241960        rs58664838      T       C       .       PASS    AA=C;DP=119     GT:GQ:DP        1|0:100:30      1|1:53:23       1|1:100:68
+18     21167737        rs6508362       A       C       .       PASS    AA=A;DP=137     GT:GQ:DP        1|0:100:30      1|1:53:29       1|1:100:78
+15     36897734        rs2624258       C       G       .       PASS    AA=g;DP=143     GT:GQ:DP        1|0:100:30      1|1:54:18       1|1:100:94
+19     7670436 rs12980031      G       T       .       PASS    AA=T;DP=94      GT:GQ:DP        1|0:100:30      1|1:54:18       1|1:86:39
+17     27766423        rs4794921       C       T       .       PASS    AA=T;DP=95      GT:GQ:DP        1|0:100:30      1|1:54:18       1|1:91:40
+17     64640724        rs12939282      G       T       .       PASS    AA=T;DP=108     GT:GQ:DP        1|0:100:30      1|1:54:19       1|1:100:59
+1      94258943        rs17110858      A       G       .       PASS    AA=A;DP=116;HM2;HM3     GT:GQ:DP        1|0:100:30      1|1:54:20       1|1:100:66
+9      84679005        rs11139847      A       G       .       PASS    AA=G;DP=141     GT:GQ:DP        1|0:100:30      1|1:54:32       1|1:100:77
+7      99379111        .       T       C       .       PASS    AA=T;DP=125     GT:GQ:DP        1|0:100:30      1|1:55:24       1|1:100:71
+18     42427447        rs328145        A       C       .       PASS    AA=C;DP=125     GT:GQ:DP        1|0:100:30      1|1:57:19       1|1:100:77
+1      108410931       rs1777483       A       C       .       PASS    AA=C;DP=115;HM2 GT:GQ:DP        1|0:100:30      1|1:58:25       1|1:100:57
+18     60209077        .       T       C       .       PASS    AA=T;DP=116     GT:GQ:DP        1|0:100:30      1|1:60:20       1|1:100:66
+9      87338921        rs2278111       C       T       .       PASS    AA=N;DP=117     GT:GQ:DP        1|0:100:30      1|1:60:20       1|1:100:68
+1      19454054        rs1774081       C       T       .       PASS    AA=T;DP=118     GT:GQ:DP        1|0:100:30      1|1:60:20       1|1:100:70
+10     111073450       rs10450379      G       A       .       PASS    AA=A;DP=123     GT:GQ:DP        1|0:100:30      1|1:60:20       1|1:93:32
+2      240662913       rs12622682      G       A       .       PASS    AA=A;DP=104     GT:GQ:DP        1|0:100:30      1|1:60:21       1|1:100:54
+21     41492315        rs8129677       C       T       .       PASS    AA=T;DP=136     GT:GQ:DP        1|0:100:30      1|1:60:21       1|1:100:85
+4      125917755       rs4000844       T       C       .       PASS    AA=T;DP=130     GT:GQ:DP        1|0:100:30      1|1:61:32       1|1:100:68
+18     75194874        rs9959068       G       A       .       PASS    AA=A;DP=131     GT:GQ:DP        1|0:100:30      1|1:63:21       1|1:100:81
+12     92264630        rs10777510      T       C       .       PASS    AA=C;DP=111     GT:GQ:DP        1|0:100:30      1|1:63:22       1|1:100:56
+2      22444561        rs1396729       C       T       .       PASS    AA=T;DP=124     GT:GQ:DP        1|0:100:30      1|1:63:22       1|1:100:73
+2      86732406        rs6547702       T       A       .       PASS    AA=A;DP=115     GT:GQ:DP        1|0:100:30      1|1:63:23       1|1:100:47
+17     73048581        rs4471749       A       G       .       PASS    AA=C;DP=140     GT:GQ:DP        1|0:100:30      1|1:63:23       1|1:100:85
+20     39316989        rs6102325       G       T       .       PASS    AA=T;DP=146     GT:GQ:DP        1|0:100:30      1|1:63:31       1|1:100:83
+1      179683514       rs6685804       A       G       .       PASS    AA=G;DP=103;HM2;HM3     GT:GQ:DP        1|0:100:30      1|1:66:22       1|1:100:51
+3      146738518       rs2219934       A       G       .       PASS    AA=G;DP=119     GT:GQ:DP        1|0:100:30      1|1:66:22       1|1:100:68
+10     95336928        rs11187539      G       A       .       PASS    AA=A;DP=123     GT:GQ:DP        1|0:100:30      1|1:66:22       1|1:100:72
+10     59225579        rs6481348       G       A       .       PASS    AA=G;DP=143     GT:GQ:DP        1|0:100:30      1|1:66:22       1|1:100:89
+11     93595152        rs1857678       C       T       .       PASS    AA=T;DP=144     GT:GQ:DP        1|0:100:30      1|1:66:22       1|1:100:92
+2      182875647       rs2448980       T       C       .       PASS    AA=t;DP=121     GT:GQ:DP        1|0:100:30      1|1:69:23       1|1:100:71
+5      38186446        rs4269309       T       A       .       PASS    AA=A;DP=121     GT:GQ:DP        1|0:100:30      1|1:69:23       1|1:100:71
+15     88862125        rs12903058      G       T       .       PASS    AA=T;DP=118     GT:GQ:DP        1|0:100:30      1|1:69:24       1|1:100:67
+14     33871350        rs1958581       G       C       .       PASS    AA=C;DP=114     GT:GQ:DP        1|0:100:30      1|1:72:24       1|1:100:59
+11     124461595       rs7102170       G       A       .       PASS    AA=G;DP=118     GT:GQ:DP        1|0:100:30      1|1:72:24       1|1:100:61
+11     33471715        rs2756280       A       G       .       PASS    AA=G;DP=135     GT:GQ:DP        1|0:100:30      1|1:72:24       1|1:100:84
+15     55653183        rs2932203       A       G       .       PASS    AA=A;DP=137     GT:GQ:DP        1|0:100:30      1|1:72:25       1|1:100:71
+5      34444991        rs1550489       G       C       .       PASS    AA=a;DP=118     GT:GQ:DP        1|0:100:30      1|1:72:26       1|1:100:61
+4      190302129       rs12186190      A       G       .       PASS    AA=A;DP=126     GT:GQ:DP        1|0:100:30      1|1:75:25       1|1:100:69
+11     120380593       rs2510639       A       G       .       PASS    AA=G;DP=141     GT:GQ:DP        1|0:100:30      1|1:75:27       1|1:100:85
+4      66413043        rs7683560       C       T       .       PASS    AA=T;DP=112     GT:GQ:DP        1|0:100:30      1|1:78:26       1|1:100:55
+11     108396446       rs11212861      C       T       .       PASS    AA=T;DP=144     GT:GQ:DP        1|0:100:30      1|1:78:26       1|1:100:87
+4      46533016        rs12503660      C       A       .       PASS    AA=A;DP=109     GT:GQ:DP        1|0:100:30      1|1:78:26       1|1:85:40
+12     125408695       rs17577161      G       A       .       PASS    AA=N;DP=116     GT:GQ:DP        1|0:100:30      1|1:78:28       1|1:100:58
+6      152683133       rs1844356       G       C       .       PASS    AA=G;DP=123     GT:GQ:DP        1|0:100:30      1|1:78:30       1|1:100:64
+6      92547679        rs4518468       T       C       .       PASS    AA=C;DP=130     GT:GQ:DP        1|0:100:30      1|1:81:27       1|1:100:73
+1      108690800       rs6704264       A       G       .       PASS    AA=a;DP=112;HM2;HM3     GT:GQ:DP        1|0:100:30      1|1:81:28       1|1:100:56
+6      1722054 rs3800058       G       A       .       PASS    AA=A;DP=111     GT:GQ:DP        1|0:100:30      1|1:84:28       1|1:100:46
+2      34787138        rs7567512       T       G       .       PASS    AA=T;DP=113     GT:GQ:DP        1|0:100:30      1|1:84:28       1|1:100:49
+6      92462084        rs567684        A       T       .       PASS    AA=T;DP=135     GT:GQ:DP        1|0:100:30      1|1:84:29       1|1:100:37
+4      73143278        rs4264802       A       G       .       PASS    AA=.;DP=105     GT:GQ:DP        1|0:100:30      1|1:84:29       1|1:100:47
+16     7056440 rs4622529       T       C       .       PASS    AA=T;DP=120     GT:GQ:DP        1|0:100:30      1|1:90:30       1|1:100:60
+20     50460887        rs4809905       G       A       .       PASS    AA=A;DP=128     GT:GQ:DP        1|0:100:30      1|1:90:30       1|1:100:70
+2      80955775        rs2131255       T       C       .       PASS    AA=t;DP=133     GT:GQ:DP        1|0:100:30      1|1:90:30       1|1:100:74
+9      88628071        rs7847644       A       G       .       PASS    AA=A;DP=138     GT:GQ:DP        1|0:100:30      1|1:99:34       1|1:100:74
+6      129997180       rs4509146       C       T       .       PASS    AA=T;DP=118     GT:GQ:DP        1|0:100:31      0|0:100:34      1|0:100:41
+6      129625166       rs3823006       G       A       .       PASS    AA=A;DP=133     GT:GQ:DP        1|0:100:31      0|0:100:34      1|0:100:71
+2      74368666        rs7560244       G       A       .       PASS    AA=G;DP=149     GT:GQ:DP        1|0:100:31      0|0:100:34      1|0:100:87
+2      53102178        rs58446135      C       A       .       PASS    AA=A;DP=129     GT:GQ:DP        1|0:100:31      0|0:100:35      1|0:100:62
+13     34416561        .       T       C       .       PASS    AA=T;DP=136     GT:GQ:DP        1|0:100:31      0|0:100:35      1|0:100:67
+1      209867178       .       T       G       .       PASS    AA=T;DP=142     GT:GQ:DP        1|0:100:31      0|0:100:35      1|0:100:77
+2      13270949        rs10208735      G       A       .       PASS    AA=A;DP=140     GT:GQ:DP        1|0:100:31      0|0:100:36      1|0:100:76
+9      28507010        rs28472295      G       A       .       PASS    AA=A;DP=142     GT:GQ:DP        1|0:100:31      0|0:100:37      1|0:100:73
+11     73477045        .       G       A       .       PASS    AA=G;DP=159     GT:GQ:DP        1|0:100:31      0|0:100:40      1|0:100:84
+4      68818769        rs10008769      G       A       .       PASS    AA=G;DP=147     GT:GQ:DP        1|0:100:31      0|0:100:44      1|0:100:73
+1      213210218       rs17023949      C       A       .       PASS    AA=C;DP=133;HM2 GT:GQ:DP        1|0:100:31      0|0:100:45      1|0:100:58
+18     55114252        rs7243416       C       T       .       PASS    AA=T;DP=153     GT:GQ:DP        1|0:100:31      0|0:100:45      1|0:100:77
+2      100237762       rs6722320       G       A       .       PASS    AA=G;DP=99      GT:GQ:DP        1|0:100:31      0|0:15:11       1|0:100:45
+2      224901981       rs7595839       A       G       .       PASS    AA=A;DP=114     GT:GQ:DP        1|0:100:31      0|0:15:15       1|0:100:68
+17     61891270        rs3859214       G       T       .       PASS    AA=T;DP=91      GT:GQ:DP        1|0:100:31      0|0:21:17       1|0:100:33
+21     42739092        rs57136818      G       A       .       PASS    AA=G;DP=93      GT:GQ:DP        1|0:100:31      0|0:24:17       1|0:100:45
+8      63913266        rs28505837      A       G       .       PASS    AA=A;DP=101     GT:GQ:DP        1|0:100:31      0|0:26:16       1|0:100:53
+8      41688531        rs10088938      G       A       .       PASS    AA=A;DP=109     GT:GQ:DP        1|0:100:31      0|0:26:19       1|0:100:60
+22     20128721        .       C       T       .       PASS    AA=C;DP=124     GT:GQ:DP        1|0:100:31      0|0:27:10       1|0:100:84
+1      53332889        rs3766767       T       C       .       PASS    AA=T;DP=82      GT:GQ:DP        1|0:100:31      0|0:32:12       1|0:73:33
+1      12792513        .       C       A       .       PASS    AA=N;DP=131     GT:GQ:DP        1|0:100:31      0|0:32:21       1|0:100:80
+19     38333472        rs60257963      T       C       .       PASS    AA=N;DP=124     GT:GQ:DP        1|0:100:31      0|0:33:23       1|0:100:74
+10     60364663        rs10826255      A       G       .       PASS    AA=A;DP=109     GT:GQ:DP        1|0:100:31      0|0:34:21       1|0:100:57
+10     72410745        rs11592390      T       C       .       PASS    AA=T;DP=124     GT:GQ:DP        1|0:100:31      0|0:37:18       1|0:100:74
+6      2823270 rs7774428       T       C       .       PASS    AA=t;DP=131     GT:GQ:DP        1|0:100:31      0|0:38:12       1|0:100:88
+1      5455968 rs60515657      G       A       .       PASS    AA=g;DP=101     GT:GQ:DP        1|0:100:31      0|0:38:13       1|0:100:56
+1      108029040       .       T       C       .       PASS    AA=T;DP=103     GT:GQ:DP        1|0:100:31      0|0:38:23       1|0:100:49
+6      86440651        .       C       T       .       PASS    AA=C;DP=125     GT:GQ:DP        1|0:100:31      0|0:38:23       1|0:100:71
+12     118712927       rs432718        T       C       .       PASS    AA=T;DP=111     GT:GQ:DP        1|0:100:31      0|0:39:17       1|0:100:62
+11     71322687        .       A       G       .       PASS    AA=A;DP=137     GT:GQ:DP        1|0:100:31      0|0:39:18       1|0:100:49
+15     71875429        .       C       A       .       PASS    AA=c;DP=97      GT:GQ:DP        1|0:100:31      0|0:40:20       1|0:100:36
+2      169305990       rs16855760      A       G       .       PASS    AA=A;DP=120     GT:GQ:DP        1|0:100:31      0|0:40:24       1|0:100:66
+11     123801883       rs58259837      G       T       .       PASS    AA=G;DP=125     GT:GQ:DP        1|0:100:31      0|0:40:24       1|0:100:71
+21     42510322        .       G       A       .       PASS    AA=G;DP=89      GT:GQ:DP        1|0:100:31      0|0:41:13       1|0:100:37
+17     41269652        .       C       T       .       PASS    AA=C;DP=104     GT:GQ:DP        1|0:100:31      0|0:41:13       1|0:100:45
+2      210861948       rs13395946      C       G       .       PASS    AA=C;DP=88      GT:GQ:DP        1|0:100:31      0|0:41:13       1|0:100:45
+12     111364338       rs12309312      A       G       .       PASS    AA=G;DP=91      GT:GQ:DP        1|0:100:31      0|0:41:13       1|0:100:46
+14     45800550        rs858890        T       C       .       PASS    AA=T;DP=94      GT:GQ:DP        1|0:100:31      0|0:41:13       1|0:100:49
+11     68414258        rs606352        G       A       .       PASS    AA=G;DP=106     GT:GQ:DP        1|0:100:31      0|0:41:13       1|0:100:63
+19     50556856        .       G       C       .       PASS    AA=G;DP=112     GT:GQ:DP        1|0:100:31      0|0:41:13       1|0:100:66
+8      109433417       rs13254536      T       G       .       PASS    AA=T;DP=128     GT:GQ:DP        1|0:100:31      0|0:41:13       1|0:100:84
+14     93788321        .       C       T       .       PASS    AA=C;DP=111     GT:GQ:DP        1|0:100:31      0|0:42:21       1|0:100:40
+5      116998910       .       T       A       .       PASS    AA=A;DP=143     GT:GQ:DP        1|0:100:31      0|0:43:25       1|0:100:68
+12     44213698        .       C       A       .       PASS    AA=C;DP=125     GT:GQ:DP        1|0:100:31      0|0:43:25       1|0:100:74
+11     107728011       rs227041        C       A       .       PASS    AA=C;DP=141     GT:GQ:DP        1|0:100:31      0|0:43:29       1|0:100:82
+4      78016836        rs7679680       G       A       .       PASS    AA=A;DP=93      GT:GQ:DP        1|0:100:31      0|0:44:14       1|0:100:49
+15     75688008        .       T       C       .       PASS    AA=C;DP=107     GT:GQ:DP        1|0:100:31      0|0:44:14       1|0:100:61
+5      6625228 rs16877574      A       T       .       PASS    AA=a;DP=109     GT:GQ:DP        1|0:100:31      0|0:44:14       1|0:100:62
+10     129520650       rs521039        C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        1|0:100:31      0|0:44:14       1|0:100:71
+13     21755403        .       G       A       .       PASS    AA=A;DP=99      GT:GQ:DP        1|0:100:31      0|0:44:15       1|0:100:54
+2      119347525       rs10188806      C       A       .       PASS    AA=C;DP=129     GT:GQ:DP        1|0:100:31      0|0:45:24       1|0:100:76
+12     6988580 .       A       G       .       PASS    AA=A;DP=99      GT:GQ:DP        1|0:100:31      0|0:47:15       1|0:100:43
+10     118465501       .       G       A       .       PASS    AA=G;DP=100     GT:GQ:DP        1|0:100:31      0|0:47:15       1|0:100:51
+1      9360384 .       C       T       .       PASS    AA=C;DP=116     GT:GQ:DP        1|0:100:31      0|0:47:15       1|0:100:72
+3      147092056       rs13073973      C       G       .       PASS    AA=G;DP=126     GT:GQ:DP        1|0:100:31      0|0:47:16       1|0:100:35
+3      54249483        rs56218729      G       A       .       PASS    AA=G;DP=121     GT:GQ:DP        1|0:100:31      0|0:47:16       1|0:100:37
+2      60355149        .       G       A       .       PASS    AA=G;DP=115     GT:GQ:DP        1|0:100:31      0|0:47:16       1|0:100:68
+16     82448502        rs28451236      C       T       .       PASS    AA=C;DP=104     GT:GQ:DP        1|0:100:31      0|0:47:17       1|0:100:61
+2      44079817        .       G       C       .       PASS    AA=G;DP=121     GT:GQ:DP        1|0:100:31      0|0:47:25       1|0:100:66
+10     29045861        .       C       T       .       PASS    AA=C;DP=125     GT:GQ:DP        1|0:100:31      0|0:48:19       1|0:100:75
+3      101436109       rs11915985      T       C       .       PASS    AA=T;DP=98      GT:GQ:DP        1|0:100:31      0|0:50:16       1|0:100:51
+21     46526263        rs13047198      T       C       .       PASS    AA=t;DP=101     GT:GQ:DP        1|0:100:31      0|0:50:16       1|0:100:57
+19     23858012        rs61693040      A       G       .       PASS    AA=a;DP=112     GT:GQ:DP        1|0:100:31      0|0:50:16       1|0:100:65
+13     87451517        .       C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        1|0:100:31      0|0:50:16       1|0:100:66
+3      136037935       .       C       T       .       PASS    AA=C;DP=91      GT:GQ:DP        1|0:100:31      0|0:50:17       1|0:100:32
+2      9853477 rs1515325       T       C       .       PASS    AA=T;DP=125     GT:GQ:DP        1|0:100:31      0|0:50:17       1|0:100:75
+2      75983378        rs7600292       G       A       .       PASS    AA=G;DP=102     GT:GQ:DP        1|0:100:31      0|0:50:18       1|0:100:53
+14     42756398        .       G       A       .       PASS    AA=G;DP=105     GT:GQ:DP        1|0:100:31      0|0:50:18       1|0:100:58
+2      160485112       rs55977890      C       T       .       PASS    AA=T;DP=117     GT:GQ:DP        1|0:100:31      0|0:50:18       1|0:100:68
+14     73766600        rs10132374      C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        1|0:100:31      0|0:50:19       1|0:100:65
+18     27275621        .       G       A       .       PASS    AA=G;DP=117     GT:GQ:DP        1|0:100:31      0|0:51:17       1|0:100:70
+12     64123837        rs56160102      C       G       .       PASS    AA=C;DP=116     GT:GQ:DP        1|0:100:31      0|0:51:18       1|0:100:67
+2      39704137        rs885252        A       C       .       PASS    AA=A;DP=119     GT:GQ:DP        1|0:100:31      0|0:51:22       1|0:100:66
+13     39226132        rs9548921       G       T       .       PASS    AA=G;DP=111     GT:GQ:DP        1|0:100:31      0|0:51:23       1|0:100:61
+17     55730960        .       G       A       .       PASS    AA=G;DP=119     GT:GQ:DP        1|0:100:31      0|0:52:21       1|0:100:67
+9      10857653        .       C       A       .       PASS    AA=C;DP=116     GT:GQ:DP        1|0:100:31      0|0:52:28       1|0:100:56
+22     47194416        rs6007848       A       C       .       PASS    AA=A;DP=128     GT:GQ:DP        1|0:100:31      0|0:52:28       1|0:100:69
+7      149870517       .       T       C       .       PASS    AA=T;DP=98      GT:GQ:DP        1|0:100:31      0|0:53:17       1|0:100:50
+15     99963267        rs11635694      G       C       .       PASS    AA=G;DP=99      GT:GQ:DP        1|0:100:31      0|0:53:17       1|0:100:53
+7      23325011        .       C       A       .       PASS    AA=C;DP=124     GT:GQ:DP        1|0:100:31      0|0:53:17       1|0:100:74
+5      176144326       rs61314874      T       C       .       PASS    AA=t;DP=131     GT:GQ:DP        1|0:100:31      0|0:53:17       1|0:100:78
+15     63246331        rs2414877       G       C       .       PASS    AA=C;DP=106     GT:GQ:DP        1|0:100:31      0|0:53:18       1|0:100:58
+12     3439030 .       A       C       .       PASS    AA=A;DP=110     GT:GQ:DP        1|0:100:31      0|0:53:18       1|0:100:61
+6      141895377       .       G       A       .       PASS    AA=G;DP=129     GT:GQ:DP        1|0:100:31      0|0:53:18       1|0:100:79
+11     78568569        rs6592833       A       G       .       PASS    AA=t;DP=128     GT:GQ:DP        1|0:100:31      0|0:53:19       1|0:100:74
+9      70437169        rs10454365      C       A       .       PASS    AA=C;DP=126     GT:GQ:DP        1|0:100:31      0|0:53:19       1|0:100:76
+12     119600348       .       C       A       .       PASS    AA=C;DP=131     GT:GQ:DP        1|0:100:31      0|0:53:27       1|0:100:73
+3      90323313        rs6793151       C       T       .       PASS    AA=C;DP=103     GT:GQ:DP        1|0:100:31      0|0:53:29       1|0:100:31
+6      30000186        .       G       T       .       PASS    AA=.;DP=115     GT:GQ:DP        1|0:100:31      0|0:54:20       1|0:100:67
+3      124436658       rs28851831      C       G       .       PASS    AA=G;DP=122     GT:GQ:DP        1|0:100:31      0|0:54:23       1|0:100:68
+7      14479963        rs12668508      T       C       .       PASS    AA=T;DP=111     GT:GQ:DP        1|0:100:31      0|0:54:25       1|0:100:55
+7      152043358       .       A       G       .       PASS    AA=G;DP=136     GT:GQ:DP        1|0:100:31      0|0:55:29       1|0:100:74
+10     131195660       rs12249475      C       A       .       PASS    AA=c;DP=94      GT:GQ:DP        1|0:100:31      0|0:56:18       1|0:100:40
+11     451512  .       C       T       .       PASS    AA=C;DP=118     GT:GQ:DP        1|0:100:31      0|0:56:18       1|0:100:58
+22     28948706        rs11089435      T       A       .       PASS    AA=A;DP=111     GT:GQ:DP        1|0:100:31      0|0:56:18       1|0:100:62
+1      160953918       .       T       G       .       PASS    AA=T;DP=116     GT:GQ:DP        1|0:100:31      0|0:56:18       1|0:100:68
+21     42154942        .       C       T       .       PASS    AA=C;DP=127     GT:GQ:DP        1|0:100:31      0|0:56:18       1|0:100:79
+9      17032974        rs56284864      T       C       .       PASS    AA=T;DP=127     GT:GQ:DP        1|0:100:31      0|0:56:18       1|0:100:80
+5      117701731       rs6595112       C       T       .       PASS    AA=C;DP=97      GT:GQ:DP        1|0:100:31      0|0:56:19       1|0:100:46
+16     83022960        .       G       A       .       PASS    AA=G;DP=96      GT:GQ:DP        1|0:100:31      0|0:56:19       1|0:100:47
+8      130304277       rs10091890      G       A       .       PASS    AA=A;DP=116     GT:GQ:DP        1|0:100:31      0|0:56:19       1|0:100:66
+9      75100220        rs12339716      C       T       .       PASS    AA=A;DP=101     GT:GQ:DP        1|0:100:31      0|0:56:20       1|0:100:50
+5      145932622       .       G       A       .       PASS    AA=G;DP=104     GT:GQ:DP        1|0:100:31      0|0:56:20       1|0:100:54
+6      124048960       rs9482425       T       C       .       PASS    AA=T;DP=115     GT:GQ:DP        1|0:100:31      0|0:56:20       1|0:100:65
+7      22872908        rs17147385      C       A       .       PASS    AA=C;DP=127     GT:GQ:DP        1|0:100:31      0|0:56:26       1|0:100:71
+12     127764847       rs56164165      G       T       .       PASS    AA=G;DP=152     GT:GQ:DP        1|0:100:31      0|0:57:26       1|0:100:95
+6      168546937       rs6911156       C       T       .       PASS    AA=C;DP=132     GT:GQ:DP        1|0:100:31      0|0:58:25       1|0:100:78
+3      138889198       rs6772470       C       T       .       PASS    AA=T;DP=114     GT:GQ:DP        1|0:100:31      0|0:58:26       1|0:100:47
+16     46626300        .       C       A       .       PASS    AA=C;DP=127     GT:GQ:DP        1|0:100:31      0|0:59:19       1|0:100:36
+2      65093834        rs62140372      T       A       .       PASS    AA=t;DP=138     GT:GQ:DP        1|0:100:31      0|0:59:19       1|0:100:49
+7      5825639 rs11972351      C       A       .       PASS    AA=C;DP=107     GT:GQ:DP        1|0:100:31      0|0:59:19       1|0:100:58
+5      150682643       .       A       T       .       PASS    AA=A;DP=122     GT:GQ:DP        1|0:100:31      0|0:59:19       1|0:100:71
+2      54453393        rs57560943      T       C       .       PASS    AA=T;DP=126     GT:GQ:DP        1|0:100:31      0|0:59:19       1|0:100:73
+1      154308157       .       G       A       .       PASS    AA=G;DP=109     GT:GQ:DP        1|0:100:31      0|0:59:20       1|0:100:60
+5      96445465        .       C       T       .       PASS    AA=C;DP=119     GT:GQ:DP        1|0:100:31      0|0:59:20       1|0:100:70
+2      226962939       rs13020901      A       G       .       PASS    AA=A;DP=134     GT:GQ:DP        1|0:100:31      0|0:59:20       1|0:100:84
+22     16829963        .       C       T       .       PASS    AA=C;DP=133     GT:GQ:DP        1|0:100:31      0|0:59:21       1|0:100:35
+10     111110328       .       G       T       .       PASS    AA=G;DP=120     GT:GQ:DP        1|0:100:31      0|0:59:29       1|0:100:57
+16     85080374        rs39528 T       C       .       PASS    AA=T;DP=150     GT:GQ:DP        1|0:100:31      0|0:60:25       1|0:100:95
+13     47434035        rs9534885       G       T       .       PASS    AA=G;DP=122     GT:GQ:DP        1|0:100:31      0|0:60:31       1|0:100:62
+12     45756826        rs11838003      A       T       .       PASS    AA=A;DP=102     GT:GQ:DP        1|0:100:31      0|0:62:20       1|0:100:52
+1      183190267       rs58512974      G       A       .       PASS    AA=G;DP=106     GT:GQ:DP        1|0:100:31      0|0:62:20       1|0:100:54
+18     65361900        rs996142        T       C       .       PASS    AA=C;DP=108     GT:GQ:DP        1|0:100:31      0|0:62:20       1|0:100:57
+13     84604242        rs6563433       A       G       .       PASS    AA=G;DP=114     GT:GQ:DP        1|0:100:31      0|0:62:20       1|0:100:60
+13     53462025        rs12876027      A       C       .       PASS    AA=A;DP=120     GT:GQ:DP        1|0:100:31      0|0:62:20       1|0:100:69
+2      168501844       .       A       G       .       PASS    AA=A;DP=119     GT:GQ:DP        1|0:100:31      0|0:62:20       1|0:100:69
+1      60036539        .       G       A       .       PASS    AA=g;DP=129     GT:GQ:DP        1|0:100:31      0|0:62:20       1|0:100:76
+3      181173788       rs12054457      G       A       .       PASS    AA=G;DP=130     GT:GQ:DP        1|0:100:31      0|0:62:20       1|0:100:79
+2      7929913 rs12328441      C       T       .       PASS    AA=C;DP=132     GT:GQ:DP        1|0:100:31      0|0:62:20       1|0:100:83
+7      34133715        rs13246579      G       T       .       PASS    AA=T;DP=149     GT:GQ:DP        1|0:100:31      0|0:62:20       1|0:100:97
+20     7410555 rs2103866       C       T       .       PASS    AA=C;DP=104     GT:GQ:DP        1|0:100:31      0|0:62:21       1|0:100:37
+5      8385747 rs16880405      A       T       .       PASS    AA=a;DP=119     GT:GQ:DP        1|0:100:31      0|0:62:21       1|0:100:68
+7      20664602        rs7807360       C       G       .       PASS    AA=C;DP=126     GT:GQ:DP        1|0:100:31      0|0:62:21       1|0:100:74
+1      242705151       rs3006014       A       G       .       PASS    AA=A;DP=105;HM2 GT:GQ:DP        1|0:100:31      0|0:62:22       1|0:100:52
+4      77214059        rs6532169       G       A       .       PASS    AA=G;DP=116     GT:GQ:DP        1|0:100:31      0|0:62:22       1|0:100:59
+12     130956600       rs11246870      C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        1|0:100:31      0|0:62:22       1|0:100:61
+18     11662462        .       T       C       .       PASS    AA=T;DP=114     GT:GQ:DP        1|0:100:31      0|0:62:22       1|0:100:63
+9      10360199        .       T       A       .       PASS    AA=T;DP=118     GT:GQ:DP        1|0:100:31      0|0:62:26       1|0:100:61
+4      148671161       .       C       A       .       PASS    AA=C;DP=93      GT:GQ:DP        1|0:100:31      0|0:65:21       1|0:100:32
+1      144244180       rs6665210       G       A       .       PASS    AA=G;DP=132;HM2;HM3     GT:GQ:DP        1|0:100:31      0|0:65:21       1|0:100:36
+7      63614245        .       T       C       .       PASS    AA=T;DP=92      GT:GQ:DP        1|0:100:31      0|0:65:21       1|0:100:40
+18     34974534        .       A       G       .       PASS    AA=A;DP=111     GT:GQ:DP        1|0:100:31      0|0:65:21       1|0:100:58
+4      19472637        rs4272009       A       G       .       PASS    AA=G;DP=118     GT:GQ:DP        1|0:100:31      0|0:65:21       1|0:100:65
+3      67711084        rs7643394       G       A       .       PASS    AA=G;DP=123     GT:GQ:DP        1|0:100:31      0|0:65:21       1|0:100:73
+11     116421091       .       T       C       .       PASS    AA=T;DP=124     GT:GQ:DP        1|0:100:31      0|0:65:21       1|0:100:75
+14     92073484        rs10144991      T       C       .       PASS    AA=T;DP=132     GT:GQ:DP        1|0:100:31      0|0:65:21       1|0:100:86
+11     131767183       rs11223049      A       G       .       PASS    AA=A;DP=111     GT:GQ:DP        1|0:100:31      0|0:65:22       1|0:100:59
+6      117778110       .       G       A       .       PASS    AA=G;DP=115     GT:GQ:DP        1|0:100:31      0|0:65:22       1|0:100:65
+8      1442147 .       T       C       .       PASS    AA=C;DP=127     GT:GQ:DP        1|0:100:31      0|0:65:22       1|0:100:73
+1      180794752       .       C       T       .       PASS    AA=c;DP=127     GT:GQ:DP        1|0:100:31      0|0:65:22       1|0:100:74
+5      172202778       rs710108        A       G       .       PASS    AA=G;DP=116     GT:GQ:DP        1|0:100:31      0|0:65:23       1|0:100:62
+3      145865830       rs11923819      C       T       .       PASS    AA=c;DP=123     GT:GQ:DP        1|0:100:31      0|0:65:23       1|0:100:68
+16     1553040 .       A       G       .       PASS    AA=A;DP=150     GT:GQ:DP        1|0:100:31      0|0:65:23       1|0:100:96
+1      215044264       .       G       A       .       PASS    AA=G;DP=106     GT:GQ:DP        1|0:100:31      0|0:65:24       1|0:100:36
+6      130669127       rs62433912      G       A       .       PASS    AA=G;DP=106     GT:GQ:DP        1|0:100:31      0|0:65:24       1|0:100:51
+3      62667213        rs4688318       C       T       .       PASS    AA=T;DP=114     GT:GQ:DP        1|0:100:31      0|0:65:24       1|0:100:58
+1      53930808        rs7555711       A       G       .       PASS    AA=A;DP=139     GT:GQ:DP        1|0:100:31      0|0:66:26       1|0:100:83
+6      159218914       .       A       G       .       PASS    AA=.;DP=140     GT:GQ:DP        1|0:100:31      0|0:68:22       1|0:100:45
+8      2484450 .       G       A       .       PASS    AA=G;DP=108     GT:GQ:DP        1|0:100:31      0|0:68:22       1|0:100:54
+14     93385984        rs28837730      T       A       .       PASS    AA=T;DP=108     GT:GQ:DP        1|0:100:31      0|0:68:22       1|0:100:55
+12     15766535        .       A       G       .       PASS    AA=A;DP=110     GT:GQ:DP        1|0:100:31      0|0:68:22       1|0:100:58
+1      84122319        .       G       C       .       PASS    AA=G;DP=122     GT:GQ:DP        1|0:100:31      0|0:68:22       1|0:100:74
+10     102616037       rs4919505       C       G       .       PASS    AA=C;DP=126     GT:GQ:DP        1|0:100:31      0|0:68:22       1|0:100:75
+13     107786464       .       G       C       .       PASS    AA=G;DP=135     GT:GQ:DP        1|0:100:31      0|0:68:22       1|0:100:79
+3      7328966 rs2136149       G       A       .       PASS    AA=G;DP=133     GT:GQ:DP        1|0:100:31      0|0:68:22       1|0:100:83
+5      10201421        rs6884905       C       T       .       PASS    AA=C;DP=139     GT:GQ:DP        1|0:100:31      0|0:68:22       1|0:100:85
+6      152182560       rs9479121       C       T       .       PASS    AA=C;DP=114     GT:GQ:DP        1|0:100:31      0|0:68:23       1|0:100:60
+6      107099705       .       G       A       .       PASS    AA=G;DP=123     GT:GQ:DP        1|0:100:31      0|0:68:23       1|0:100:68
+3      99215528        rs832023        T       A       .       PASS    AA=A;DP=119     GT:GQ:DP        1|0:100:31      0|0:68:23       1|0:100:70
+1      54534969        rs11206322      G       C       .       PASS    AA=G;DP=128     GT:GQ:DP        1|0:100:31      0|0:68:23       1|0:100:71
+17     59286128        rs16947154      C       T       .       PASS    AA=C;DP=130     GT:GQ:DP        1|0:100:31      0|0:68:23       1|0:100:77
+4      6126559 .       C       G       .       PASS    AA=C;DP=130     GT:GQ:DP        1|0:100:31      0|0:68:23       1|0:100:78
+15     58054247        .       T       C       .       PASS    AA=T;DP=107     GT:GQ:DP        1|0:100:31      0|0:68:24       1|0:100:39
+14     62212265        rs965177        C       G       .       PASS    AA=C;DP=118     GT:GQ:DP        1|0:100:31      0|0:68:24       1|0:100:63
+22     21188215        rs16989163      G       C       .       PASS    AA=G;DP=123     GT:GQ:DP        1|0:100:31      0|0:68:25       1|0:100:65
+5      36039664        .       G       A       .       PASS    AA=G;DP=124     GT:GQ:DP        1|0:100:31      0|0:68:29       1|0:100:63
+4      108278997       .       C       T       .       PASS    AA=C;DP=127     GT:GQ:DP        1|0:100:31      0|0:68:29       1|0:100:66
+8      21394542        rs11204174      G       C       .       PASS    AA=g;DP=152     GT:GQ:DP        1|0:100:31      0|0:68:30       1|0:100:48
+1      212425221       .       C       T       .       PASS    AA=C;DP=116     GT:GQ:DP        1|0:100:31      0|0:69:27       1|0:100:60
+15     66202774        .       T       A       .       PASS    AA=T;DP=122     GT:GQ:DP        1|0:100:31      0|0:71:23       1|0:100:29
+6      87839574        rs9450611       A       G       .       PASS    AA=G;DP=107     GT:GQ:DP        1|0:100:31      0|0:71:23       1|0:100:54
+18     44933867        rs9955181       C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        1|0:100:31      0|0:71:23       1|0:100:60
+8      116376567       .       T       A       .       PASS    AA=T;DP=125     GT:GQ:DP        1|0:100:31      0|0:71:23       1|0:100:74
+16     75036700        rs16944440      T       G       .       PASS    AA=T;DP=139     GT:GQ:DP        1|0:100:31      0|0:71:23       1|0:100:82
+4      96492586        rs10516966      C       T       .       PASS    AA=C;DP=154     GT:GQ:DP        1|0:100:31      0|0:71:24       1|0:100:48
+5      20586260        rs1703043       T       C       .       PASS    AA=T;DP=105     GT:GQ:DP        1|0:100:31      0|0:71:24       1|0:100:53
+16     15744747        rs13335203      G       A       .       PASS    AA=G;DP=110     GT:GQ:DP        1|0:100:31      0|0:71:24       1|0:100:55
+15     98131008        .       G       A       .       PASS    AA=.;DP=120     GT:GQ:DP        1|0:100:31      0|0:71:24       1|0:100:67
+2      3413650 rs6733486       C       T       .       PASS    AA=C;DP=126     GT:GQ:DP        1|0:100:31      0|0:71:24       1|0:100:74
+14     54786833        rs8010557       T       C       .       PASS    AA=C;DP=132     GT:GQ:DP        1|0:100:31      0|0:71:24       1|0:100:77
+12     104442157       rs12313661      G       A       .       PASS    AA=G;DP=125     GT:GQ:DP        1|0:100:31      0|0:71:25       1|0:100:66
+4      10269383        .       T       C       .       PASS    AA=T;DP=137     GT:GQ:DP        1|0:100:31      0|0:71:25       1|0:100:79
+19     15089542        rs7507755       A       G       .       PASS    AA=G;DP=119     GT:GQ:DP        1|0:100:31      0|0:74:24       1|0:100:64
+19     4986136 rs10404611      C       T       .       PASS    AA=c;DP=120     GT:GQ:DP        1|0:100:31      0|0:74:24       1|0:100:65
+5      125410067       .       T       C       .       PASS    AA=T;DP=122     GT:GQ:DP        1|0:100:31      0|0:74:24       1|0:100:67
+8      8589120 rs4841012       C       A       .       PASS    AA=A;DP=124     GT:GQ:DP        1|0:100:31      0|0:74:24       1|0:100:70
+10     30467758        .       A       C       .       PASS    AA=A;DP=137     GT:GQ:DP        1|0:100:31      0|0:74:24       1|0:100:80
+3      148888950       rs59394684      G       A       .       PASS    AA=G;DP=122     GT:GQ:DP        1|0:100:31      0|0:74:25       1|0:100:66
+7      120741397       .       G       A       .       PASS    AA=G;DP=129     GT:GQ:DP        1|0:100:31      0|0:74:25       1|0:100:69
+11     21322681        rs17233193      A       C       .       PASS    AA=A;DP=127     GT:GQ:DP        1|0:100:31      0|0:74:25       1|0:100:72
+15     37590222        rs16969165      T       A       .       PASS    AA=T;DP=138     GT:GQ:DP        1|0:100:31      0|0:74:25       1|0:100:81
+4      124013620       rs6819187       C       A       .       PASS    AA=C;DP=141     GT:GQ:DP        1|0:100:31      0|0:75:28       1|0:100:84
+10     79717424        rs1649988       C       T       .       PASS    AA=C;DP=146     GT:GQ:DP        1|0:100:31      0|0:77:25       1|0:100:47
+4      158650491       rs11737193      T       C       .       PASS    AA=T;DP=112     GT:GQ:DP        1|0:100:31      0|0:77:25       1|0:100:56
+4      102713781       rs4699239       T       C       .       PASS    AA=T;DP=113     GT:GQ:DP        1|0:100:31      0|0:77:25       1|0:100:57
+9      91627277        rs3925048       C       G       .       PASS    AA=-;DP=117     GT:GQ:DP        1|0:100:31      0|0:77:25       1|0:100:63
+7      109632161       .       G       C       .       PASS    AA=G;DP=124     GT:GQ:DP        1|0:100:31      0|0:77:25       1|0:100:66
+20     12545022        rs6041482       C       T       .       PASS    AA=C;DP=126     GT:GQ:DP        1|0:100:31      0|0:77:25       1|0:100:70
+2      36587048        rs6733434       C       T       .       PASS    AA=C;DP=148     GT:GQ:DP        1|0:100:31      0|0:77:25       1|0:100:95
+9      21861812        .       C       T       .       PASS    AA=T;DP=103     GT:GQ:DP        1|0:100:31      0|0:77:26       1|0:100:36
+X      821655  rs5946585       C       G       .       PASS    AA=.;DP=106     GT:GQ:DP        1|0:100:31      0|0:77:26       1|0:100:43
+3      122563599       .       T       A       .       PASS    AA=T;DP=132     GT:GQ:DP        1|0:100:31      0|0:77:26       1|0:100:72
+18     60266055        rs2909638       T       C       .       PASS    AA=T;DP=117     GT:GQ:DP        1|0:100:31      0|0:77:27       1|0:100:57
+2      69780156        rs60293161      G       A       .       PASS    AA=G;DP=122     GT:GQ:DP        1|0:100:31      0|0:77:27       1|0:100:60
+19     56545208        rs12977906      G       A       .       PASS    AA=g;DP=120     GT:GQ:DP        1|0:100:31      0|0:77:27       1|0:100:61
+1      93147979        rs12066638      C       G       .       PASS    AA=G;DP=132;HM2;HM3     GT:GQ:DP        1|0:100:31      0|0:77:27       1|0:100:75
+5      71078018        rs10057073      A       C       .       PASS    AA=C;DP=138     GT:GQ:DP        1|0:100:31      0|0:78:37       1|0:100:69
+4      166650082       .       G       A       .       PASS    AA=G;DP=146     GT:GQ:DP        1|0:100:31      0|0:78:37       1|0:100:78
+2      71723520        .       G       A       .       PASS    AA=A;DP=152     GT:GQ:DP        1|0:100:31      0|0:7:18        1|0:100:59
+15     52108898        rs17732069      C       T       .       PASS    AA=c;DP=113     GT:GQ:DP        1|0:100:31      0|0:80:26       1|0:100:57
+13     79886758        .       G       T       .       PASS    AA=G;DP=119     GT:GQ:DP        1|0:100:31      0|0:80:26       1|0:100:64
+20     33087098        rs6088686       C       T       .       PASS    AA=C;DP=132     GT:GQ:DP        1|0:100:31      0|0:80:26       1|0:100:74
+1      37861833        .       C       A       .       PASS    AA=C;DP=136     GT:GQ:DP        1|0:100:31      0|0:80:26       1|0:100:79
+9      5177282 rs58242266      A       G       .       PASS    AA=A;DP=137     GT:GQ:DP        1|0:100:31      0|0:80:26       1|0:100:80
+13     32744262        .       T       G       .       PASS    AA=T;DP=153     GT:GQ:DP        1|0:100:31      0|0:80:27       1|0:100:43
+15     79668290        .       T       C       .       PASS    AA=T;DP=105     GT:GQ:DP        1|0:100:31      0|0:80:27       1|0:100:48
+2      226197534       .       A       G       .       PASS    AA=A;DP=124     GT:GQ:DP        1|0:100:31      0|0:80:27       1|0:100:66
+5      177892387       rs520212        T       G       .       PASS    AA=T;DP=138     GT:GQ:DP        1|0:100:31      0|0:80:27       1|0:100:78
+2      135045637       .       C       T       .       PASS    AA=C;DP=148     GT:GQ:DP        1|0:100:31      0|0:80:27       1|0:100:90
+17     13835586        rs10445279      T       C       .       PASS    AA=C;DP=136     GT:GQ:DP        1|0:100:31      0|0:80:28       1|0:100:74
+1      81642773        rs3890825       T       C       .       PASS    AA=A;DP=113;HM2;HM3     GT:GQ:DP        1|0:100:31      0|0:81:30       1|0:100:54
+5      17951293        rs62349591      T       A       .       PASS    AA=T;DP=113     GT:GQ:DP        1|0:100:31      0|0:81:32       1|0:100:50
+15     98282990        rs56827608      C       T       .       PASS    AA=C;DP=140     GT:GQ:DP        1|0:100:31      0|0:82:36       1|0:100:74
+22     44179590        rs5765327       A       T       .       PASS    AA=A;DP=127     GT:GQ:DP        1|0:100:31      0|0:83:27       1|0:100:71
+6      164151190       rs13218107      A       G       .       PASS    AA=a;DP=101     GT:GQ:DP        1|0:100:31      0|0:83:28       1|0:100:32
+18     5661637 rs4797220       G       A       .       PASS    AA=g;DP=134     GT:GQ:DP        1|0:100:31      0|0:83:28       1|0:100:71
+2      10178676        rs11681986      G       A       .       PASS    AA=G;DP=127     GT:GQ:DP        1|0:100:31      0|0:83:28       1|0:100:71
+3      197070163       .       A       G       .       PASS    AA=A;DP=131     GT:GQ:DP        1|0:100:31      0|0:83:28       1|0:100:75
+9      91979265        .       G       A       .       PASS    AA=G;DP=150     GT:GQ:DP        1|0:100:31      0|0:83:30       1|0:100:67
+2      68867815        .       G       A       .       PASS    AA=G;DP=135     GT:GQ:DP        1|0:100:31      0|0:83:30       1|0:100:74
+5      163276455       rs4868820       T       A       .       PASS    AA=T;DP=139     GT:GQ:DP        1|0:100:31      0|0:84:34       1|0:100:75
+2      215686248       .       T       C       .       PASS    AA=T;DP=136     GT:GQ:DP        1|0:100:31      0|0:86:28       1|0:100:37
+10     29340286        rs1763367       A       G       .       PASS    AA=G;DP=117     GT:GQ:DP        1|0:100:31      0|0:86:28       1|0:100:59
+6      88643140        .       A       G       .       PASS    AA=A;DP=129     GT:GQ:DP        1|0:100:31      0|0:86:28       1|0:100:72
+19     63474839        rs439333        T       A       .       PASS    AA=T;DP=130     GT:GQ:DP        1|0:100:31      0|0:86:28       1|0:100:73
+1      237817222       .       C       T       .       PASS    AA=C;DP=134     GT:GQ:DP        1|0:100:31      0|0:86:28       1|0:100:75
+6      53382208        .       C       T       .       PASS    AA=T;DP=134     GT:GQ:DP        1|0:100:31      0|0:86:28       1|0:100:77
+3      187420714       rs741479        A       G       .       PASS    AA=A;DP=155     GT:GQ:DP        1|0:100:31      0|0:86:29       1|0:100:94
+12     94484841        rs12581341      C       T       .       PASS    AA=C;DP=128     GT:GQ:DP        1|0:100:31      0|0:86:31       1|0:100:67
+4      162378428       rs34438860      G       T       .       PASS    AA=T;DP=128     GT:GQ:DP        1|0:100:31      0|0:88:36       1|0:100:58
+1      175315156       .       A       T       .       PASS    AA=A;DP=121     GT:GQ:DP        1|0:100:31      0|0:89:29       1|0:100:60
+19     62378616        rs740400        C       T       .       PASS    AA=C;DP=155     GT:GQ:DP        1|0:100:31      0|0:89:29       1|0:100:82
+12     95354308        .       C       T       .       PASS    AA=c;DP=144     GT:GQ:DP        1|0:100:31      0|0:89:29       1|0:100:84
+3      181030855       .       G       A       .       PASS    AA=G;DP=147     GT:GQ:DP        1|0:100:31      0|0:89:31       1|0:100:86
+11     79206752        .       G       A       .       PASS    AA=A;DP=146     GT:GQ:DP        1|0:100:31      0|0:89:31       1|0:100:88
+17     53762364        .       T       C       .       PASS    AA=T;DP=161     GT:GQ:DP        1|0:100:31      0|0:92:30       1|0:100:58
+3      173480937       rs9812512       C       T       .       PASS    AA=C;DP=144     GT:GQ:DP        1|0:100:31      0|0:92:30       1|0:100:82
+7      17265849        rs763621        T       C       .       PASS    AA=T;DP=146     GT:GQ:DP        1|0:100:31      0|0:92:30       1|0:100:87
+4      180068917       .       C       T       .       PASS    AA=C;DP=131     GT:GQ:DP        1|0:100:31      0|0:92:31       1|0:100:67
+4      121042305       rs60325752      G       A       .       PASS    AA=G;DP=129     GT:GQ:DP        1|0:100:31      0|0:92:31       1|0:100:68
+13     25927872        rs585822        A       G       .       PASS    AA=A;DP=134     GT:GQ:DP        1|0:100:31      0|0:92:31       1|0:100:72
+20     37339774        rs16987872      G       A       .       PASS    AA=G;DP=139     GT:GQ:DP        1|0:100:31      0|0:92:31       1|0:100:80
+7      41061103        rs61597427      G       T       .       PASS    AA=G;DP=147     GT:GQ:DP        1|0:100:31      0|0:92:32       1|0:100:37
+8      72172631        rs11994572      G       A       .       PASS    AA=G;DP=146     GT:GQ:DP        1|0:100:31      0|0:93:35       1|0:100:80
+3      78540332        .       G       A       .       PASS    AA=G;DP=111     GT:GQ:DP        1|0:100:31      0|0:95:31       1|0:100:49
+14     61835608        rs8009326       A       G       .       PASS    AA=A;DP=135     GT:GQ:DP        1|0:100:31      0|0:95:31       1|0:100:67
+2      49189946        .       G       T       .       PASS    AA=G;DP=135     GT:GQ:DP        1|0:100:31      0|0:95:31       1|0:100:77
+3      170868443       .       G       T       .       PASS    AA=G;DP=138     GT:GQ:DP        1|0:100:31      0|0:95:31       1|0:100:78
+20     36231625        rs11698616      T       C       .       PASS    AA=C;DP=147     GT:GQ:DP        1|0:100:31      0|0:95:31       1|0:100:86
+3      146558423       .       G       A       .       PASS    AA=G;DP=149     GT:GQ:DP        1|0:100:31      0|0:95:31       1|0:100:88
+4      15632246        rs13106881      T       A       .       PASS    AA=T;DP=133     GT:GQ:DP        1|0:100:31      0|0:95:32       1|0:100:70
+1      239675026       rs1578488       C       T       .       PASS    AA=c;DP=139;HM3 GT:GQ:DP        1|0:100:31      0|0:95:33       1|0:100:35
+1      223925809       .       C       G       .       PASS    AA=G;DP=147     GT:GQ:DP        1|0:100:31      0|0:95:34       1|0:100:83
+18     29288122        rs34625905      C       T       .       PASS    AA=C;DP=144     GT:GQ:DP        1|0:100:31      0|0:95:35       1|0:100:67
+1      28765105        rs9286966       T       G       .       PASS    AA=N;DP=146;HM2;HM3     GT:GQ:DP        1|0:100:31      0|0:98:32       1|0:100:42
+12     108463626       rs1030066       A       G       .       PASS    AA=A;DP=156     GT:GQ:DP        1|0:100:31      0|0:98:32       1|0:100:53
+12     90505243        .       G       A       .       PASS    AA=G;DP=139     GT:GQ:DP        1|0:100:31      0|0:98:32       1|0:100:75
+5      98603721        rs7716779       T       C       .       PASS    AA=T;DP=130     GT:GQ:DP        1|0:100:31      0|0:98:34       1|0:100:49
+12     87414289        .       G       A       .       PASS    AA=G;DP=154     GT:GQ:DP        1|0:100:31      0|0:98:34       1|0:100:89
+17     68797185        rs8080848       G       A       .       PASS    AA=G;DP=94      GT:GQ:DP        1|0:100:31      1|0:100:10      1|1:100:54
+12     97991943        rs7975384       C       T       .       PASS    AA=T;DP=105     GT:GQ:DP        1|0:100:31      1|0:100:14      1|1:100:60
+2      228656109       rs34191541      G       A       .       PASS    AA=A;DP=108     GT:GQ:DP        1|0:100:31      1|0:100:14      1|1:100:62
+17     68402847        rs4438364       T       C       .       PASS    AA=T;DP=123     GT:GQ:DP        1|0:100:31      1|0:100:14      1|1:100:76
+1      79626481        rs3015051       C       G       .       PASS    AA=G;DP=106;HM2 GT:GQ:DP        1|0:100:31      1|0:100:15      1|1:100:60
+11     56431288        rs7122512       C       A       .       PASS    AA=C;DP=109     GT:GQ:DP        1|0:100:31      1|0:100:15      1|1:100:64
+11     122679359       .       A       G       .       PASS    AA=A;DP=101     GT:GQ:DP        1|0:100:31      1|0:100:17      1|1:100:54
+5      123070054       .       T       A       .       PASS    AA=T;DP=101     GT:GQ:DP        1|0:100:31      1|0:100:17      1|1:100:54
+12     77060985        rs2853476       C       T       .       PASS    AA=C;DP=93      GT:GQ:DP        1|0:100:31      1|0:100:18      1|1:100:36
+18     48581711        rs11665089      G       A       .       PASS    AA=G;DP=106     GT:GQ:DP        1|0:100:31      1|0:100:18      1|1:100:45
+5      165690837       rs1392381       G       A       .       PASS    AA=A;DP=106     GT:GQ:DP        1|0:100:31      1|0:100:18      1|1:100:59
+2      10693084        rs7587281       T       C       .       PASS    AA=T;DP=101     GT:GQ:DP        1|0:100:31      1|0:100:19      1|1:100:51
+4      103830819       rs17033168      T       C       .       PASS    AA=T;DP=125     GT:GQ:DP        1|0:100:31      1|0:100:20      1|1:100:73
+5      127791369       rs331084        G       A       .       PASS    AA=G;DP=139     GT:GQ:DP        1|0:100:31      1|0:100:20      1|1:100:83
+1      173215365       .       A       G       .       PASS    AA=A;DP=135     GT:GQ:DP        1|0:100:31      1|0:100:20      1|1:100:84
+15     97231946        rs1521481       A       C       .       PASS    AA=C;DP=135     GT:GQ:DP        1|0:100:31      1|0:100:20      1|1:100:86
+14     89064435        rs1287336       A       G       .       PASS    AA=A;DP=101     GT:GQ:DP        1|0:100:31      1|0:100:21      1|1:100:40
+2      41506911        .       T       C       .       PASS    AA=T;DP=110     GT:GQ:DP        1|0:100:31      1|0:100:21      1|1:100:56
+6      113996530       rs6904910       T       C       .       PASS    AA=t;DP=133     GT:GQ:DP        1|0:100:31      1|0:100:21      1|1:100:64
+5      1908301 rs91315 T       C       .       PASS    AA=t;DP=120     GT:GQ:DP        1|0:100:31      1|0:100:21      1|1:100:68
+2      220888356       rs11676335      T       C       .       PASS    AA=T;DP=131     GT:GQ:DP        1|0:100:31      1|0:100:21      1|1:100:80
+2      106977397       rs10221969      C       G       .       PASS    AA=G;DP=138     GT:GQ:DP        1|0:100:31      1|0:100:21      1|1:100:85
+9      3335771 rs12337888      G       C       .       PASS    AA=G;DP=117     GT:GQ:DP        1|0:100:31      1|0:100:22      1|1:100:66
+11     111833374       rs57801166      T       C       .       PASS    AA=T;DP=127     GT:GQ:DP        1|0:100:31      1|0:100:22      1|1:100:71
+11     56672403        .       A       G       .       PASS    AA=A;DP=125     GT:GQ:DP        1|0:100:31      1|0:100:22      1|1:100:75
+21     30756164        rs56976712      T       A       .       PASS    AA=T;DP=96      GT:GQ:DP        1|0:100:31      1|0:100:22      1|1:63:31
+12     122383749       rs12316131      T       C       .       PASS    AA=T;DP=121     GT:GQ:DP        1|0:100:31      1|0:100:23      1|1:100:67
+19     40197790        rs62122154      A       G       .       PASS    AA=G;DP=110     GT:GQ:DP        1|0:100:31      1|0:100:24      1|1:100:55
+9      4745003 rs690966        C       T       .       PASS    AA=.;DP=110     GT:GQ:DP        1|0:100:31      1|0:100:24      1|1:100:55
+19     7714452 rs10410342      G       C       .       PASS    AA=G;DP=133     GT:GQ:DP        1|0:100:31      1|0:100:24      1|1:100:67
+18     61108446        rs655937        T       C       .       PASS    AA=C;DP=131     GT:GQ:DP        1|0:100:31      1|0:100:24      1|1:100:68
+5      31681772        .       G       A       .       PASS    AA=G;DP=122     GT:GQ:DP        1|0:100:31      1|0:100:24      1|1:95:67
+11     6179745 rs55840831      G       T       .       PASS    AA=G;DP=120     GT:GQ:DP        1|0:100:31      1|0:100:25      1|1:100:50
+13     99615662        rs7335573       T       G       .       PASS    AA=T;DP=119     GT:GQ:DP        1|0:100:31      1|0:100:25      1|1:100:59
+18     36530192        rs4522492       C       A       .       PASS    AA=A;DP=113     GT:GQ:DP        1|0:100:31      1|0:100:25      1|1:100:59
+6      12061619        rs209813        A       G       .       PASS    AA=G;DP=129     GT:GQ:DP        1|0:100:31      1|0:100:25      1|1:100:70
+1      232234739       rs10910330      T       A       .       PASS    AA=T;DP=101     GT:GQ:DP        1|0:100:31      1|0:100:25      1|1:84:29
+21     28529205        rs442626        A       G       .       PASS    AA=G;DP=123     GT:GQ:DP        1|0:100:31      1|0:100:26      1|1:82:72
+4      84492332        rs56676657      C       A       .       PASS    AA=A;DP=131     GT:GQ:DP        1|0:100:31      1|0:100:27      1|1:100:67
+5      124850429       .       A       G       .       PASS    AA=A;DP=134     GT:GQ:DP        1|0:100:31      1|0:100:27      1|1:100:78
+9      85300194        rs4111744       G       A       .       PASS    AA=g;DP=119     GT:GQ:DP        1|0:100:31      1|0:100:28      1|1:100:56
+7      47785491        rs1453288       G       A       .       PASS    AA=g;DP=115     GT:GQ:DP        1|0:100:31      1|0:100:28      1|1:100:57
+4      142053097       rs1425441       T       G       .       PASS    AA=C;DP=135     GT:GQ:DP        1|0:100:31      1|0:100:28      1|1:100:77
+7      81062275        .       T       C       .       PASS    AA=T;DP=119     GT:GQ:DP        1|0:100:31      1|0:100:29      1|1:100:61
+11     17928264        rs2237915       G       A       .       PASS    AA=A;DP=152     GT:GQ:DP        1|0:100:31      1|0:100:29      1|1:100:95
+5      107882961       rs10065014      C       A       .       PASS    AA=C;DP=134     GT:GQ:DP        1|0:100:31      1|0:100:31      1|1:100:60
+18     55459304        rs10445541      G       A       .       PASS    AA=G;DP=120     GT:GQ:DP        1|0:100:31      1|0:100:32      1|1:100:58
+2      12867224        rs7601980       G       C       .       PASS    AA=G;DP=137     GT:GQ:DP        1|0:100:31      1|0:100:35      1|1:100:71
+21     35725607        rs11088319      T       C       .       PASS    AA=T;DP=138     GT:GQ:DP        1|0:100:31      1|0:100:35      1|1:100:73
+3      171905581       rs534024        A       C       .       PASS    AA=a;DP=123     GT:GQ:DP        1|0:100:31      1|0:100:35      1|1:36:57
+18     9275824 rs1114591       T       C       .       PASS    AA=C;DP=129     GT:GQ:DP        1|0:100:31      1|0:100:36      1|1:100:62
+4      105591143       rs57140255      T       C       .       PASS    AA=T;DP=102     GT:GQ:DP        1|0:100:31      1|0:29:19       1|1:100:42
+8      87472703        rs6471316       G       C       .       PASS    AA=C;DP=116     GT:GQ:DP        1|0:100:31      1|0:39:26       1|1:100:59
+16     88671228        rs35986951      C       T       .       PASS    AA=.;DP=92      GT:GQ:DP        1|0:100:31      1|0:41:18       1|1:99:35
+4      189080299       rs6553113       C       T       .       PASS    AA=C;DP=114     GT:GQ:DP        1|0:100:31      1|0:63:25       1|1:100:59
+20     62019669        rs6062586       C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        1|0:100:31      1|0:64:16       1|1:100:66
+12     102368719       rs4300484       T       A       .       PASS    AA=T;DP=125     GT:GQ:DP        1|0:100:31      1|0:6:15        1|1:100:80
+2      60763875        .       G       A       .       PASS    AA=g;DP=126     GT:GQ:DP        1|0:100:31      1|0:70:22       1|1:100:75
+2      147137122       rs10170691      G       T       .       PASS    AA=G;DP=80      GT:GQ:DP        1|0:100:31      1|0:71:16       1|1:40:25
+3      10411869        rs9860273       C       T       .       PASS    AA=C;DP=113     GT:GQ:DP        1|0:100:31      1|0:77:14       1|1:100:67
+3      124160406       rs7635136       T       C       .       PASS    AA=C;DP=124     GT:GQ:DP        1|0:100:31      1|0:81:13       1|1:100:75
+11     833927  rs12577104      A       G       .       PASS    AA=G;DP=90      GT:GQ:DP        1|0:100:31      1|0:83:7        1|1:100:52
+12     46482206        rs2525051       G       C       .       PASS    AA=C;DP=129     GT:GQ:DP        1|0:100:31      1|0:8:17        1|1:100:80
+6      161363446       rs7756711       A       G       .       PASS    AA=A;DP=127     GT:GQ:DP        1|0:100:31      1|0:90:15       1|1:100:82
+19     17832120        rs59508068      G       A       .       PASS    AA=G;DP=148     GT:GQ:DP        1|0:100:31      1|0:91:15       1|1:100:56
+14     61429828        rs217669        T       C       .       PASS    AA=C;DP=103     GT:GQ:DP        1|0:100:31      1|0:92:18       1|1:100:54
+1      15340016        rs4287171       G       A       .       PASS    AA=T;DP=124;HM2 GT:GQ:DP        1|0:100:31      1|0:93:19       1|1:100:74
+3      123025810       rs6776670       C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        1|0:100:31      1|0:95:23       1|1:100:55
+16     74697627        rs2432608       G       A       .       PASS    AA=G;DP=118     GT:GQ:DP        1|0:100:31      1|0:99:30       1|1:100:53
+4      6957764 rs10033778      T       C       .       PASS    AA=T;DP=87      GT:GQ:DP        1|0:100:31      1|1:10:14       1|1:100:35
+15     93882267        rs8030311       C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        1|0:100:31      1|1:18:24       1|1:94:60
+11     100024596       .       T       A       .       PASS    AA=T;DP=106     GT:GQ:DP        1|0:100:31      1|1:19:17       1|1:100:51
+22     45819804        rs131899        G       C       .       PASS    AA=C;DP=93      GT:GQ:DP        1|0:100:31      1|1:21:9        1|1:100:46
+2      231550157       rs3115375       C       T       .       PASS    AA=T;DP=135     GT:GQ:DP        1|0:100:31      1|1:24:19       1|1:100:86
+1      98740718        rs1724956       G       A       .       PASS    AA=A;DP=89;HM2  GT:GQ:DP        1|0:100:31      1|1:26:14       1|1:78:39
+1      101861472       rs10782844      A       G       .       PASS    AA=A;DP=119;HM2;HM3     GT:GQ:DP        1|0:100:31      1|1:27:20       1|1:100:66
+19     5480613 rs4807778       T       G       .       PASS    AA=G;DP=91      GT:GQ:DP        1|0:100:31      1|1:27:9        1|1:100:40
+16     52693671        rs8058661       A       C       .       PASS    AA=C;DP=112     GT:GQ:DP        1|0:100:31      1|1:29:26       1|1:100:54
+11     33623909        rs1033543       A       G       .       PASS    AA=G;DP=108     GT:GQ:DP        1|0:100:31      1|1:33:11       1|1:100:62
+8      10443426        rs7846127       G       C       .       PASS    AA=N;DP=101     GT:GQ:DP        1|0:100:31      1|1:36:12       1|1:100:47
+10     26604857        rs7909127       A       G       .       PASS    AA=A;DP=110     GT:GQ:DP        1|0:100:31      1|1:39:19       1|1:100:56
+6      137966355       rs695151        T       G       .       PASS    AA=T;DP=141     GT:GQ:DP        1|0:100:31      1|1:41:28       1|1:100:78
+10     86456122        rs1577274       T       C       .       PASS    AA=T;DP=113     GT:GQ:DP        1|0:100:31      1|1:42:16       1|1:100:59
+3      39535440        rs1768267       T       A       .       PASS    AA=T;DP=108     GT:GQ:DP        1|0:100:31      1|1:42:18       1|1:100:59
+14     76591507        rs7142658       C       T       .       PASS    AA=T;DP=128     GT:GQ:DP        1|0:100:31      1|1:42:24       1|1:100:69
+13     41693991        rs347384        A       G       .       PASS    AA=G;DP=98      GT:GQ:DP        1|0:100:31      1|1:45:16       1|1:100:51
+1      211045864       rs10779583      G       A       .       PASS    AA=A;DP=116     GT:GQ:DP        1|0:100:31      1|1:45:25       1|1:100:57
+3      101214020       rs4928237       A       T       .       PASS    AA=A;DP=96      GT:GQ:DP        1|0:100:31      1|1:48:16       1|1:100:50
+16     50333299        rs1350879       T       C       .       PASS    AA=C;DP=89      GT:GQ:DP        1|0:100:31      1|1:48:18       1|1:52:30
+4      97469562        rs6844915       T       C       .       PASS    AA=C;DP=112     GT:GQ:DP        1|0:100:31      1|1:51:17       1|1:100:60
+13     27008062        rs9579101       C       T       .       PASS    AA=T;DP=109     GT:GQ:DP        1|0:100:31      1|1:51:17       1|1:100:61
+21     35358588        rs2834745       G       A       .       PASS    AA=G;DP=102     GT:GQ:DP        1|0:100:31      1|1:51:18       1|1:100:53
+13     90079925        rs1572962       G       A       .       PASS    AA=A;DP=101     GT:GQ:DP        1|0:100:31      1|1:54:18       1|1:100:49
+1      156310329       rs11264897      G       A       .       PASS    AA=A;DP=129;HM2;HM3     GT:GQ:DP        1|0:100:31      1|1:54:19       1|1:100:57
+16     70627630        rs2550870       C       T       .       PASS    AA=C;DP=106     GT:GQ:DP        1|0:100:31      1|1:54:19       1|1:100:57
+19     55658404        rs2463246       A       C       .       PASS    AA=C;DP=125     GT:GQ:DP        1|0:100:31      1|1:55:24       1|1:100:72
+10     6562512 rs3793729       A       G       .       PASS    AA=A;DP=113     GT:GQ:DP        1|0:100:31      1|1:55:26       1|1:100:45
+5      65911694        rs4274939       T       G       .       PASS    AA=G;DP=137     GT:GQ:DP        1|0:100:31      1|1:57:20       1|1:100:87
+3      21709120        rs6800607       C       G       .       PASS    AA=G;DP=137     GT:GQ:DP        1|0:100:31      1|1:57:21       1|1:100:87
+16     15927689        rs7204505       C       A       .       PASS    AA=A;DP=143     GT:GQ:DP        1|0:100:31      1|1:60:20       1|1:100:40
+6      131468869       rs1919453       A       G       .       PASS    AA=a;DP=148     GT:GQ:DP        1|0:100:31      1|1:60:23       1|1:100:51
+2      237209840       rs1796443       T       G       .       PASS    AA=G;DP=117     GT:GQ:DP        1|0:100:31      1|1:61:27       1|1:100:58
+6      122213159       rs1320759       A       G       .       PASS    AA=A;DP=128     GT:GQ:DP        1|0:100:31      1|1:61:33       1|1:100:64
+3      96911235        rs9874148       G       A       .       PASS    AA=A;DP=114     GT:GQ:DP        1|0:100:31      1|1:63:21       1|1:100:62
+3      16308320        rs7637475       T       C       .       PASS    AA=C;DP=121     GT:GQ:DP        1|0:100:31      1|1:63:27       1|1:100:66
+10     115315021       rs7088443       A       G       .       PASS    AA=G;DP=123     GT:GQ:DP        1|0:100:31      1|1:69:23       1|1:100:70
+1      229125865       rs6704291       A       C       .       PASS    AA=C;DP=131     GT:GQ:DP        1|0:100:31      1|1:69:23       1|1:100:77
+5      5354690 rs13187616      G       A       .       PASS    AA=G;DP=135     GT:GQ:DP        1|0:100:31      1|1:69:23       1|1:100:80
+4      175302539       rs10004836      C       G       .       PASS    AA=C;DP=124     GT:GQ:DP        1|0:100:31      1|1:69:24       1|1:100:66
+1      236089656       rs2819755       A       G       .       PASS    AA=G;DP=144;HM3 GT:GQ:DP        1|0:100:31      1|1:69:24       1|1:100:91
+15     77241429        rs34286854      C       T       .       PASS    AA=C;DP=137     GT:GQ:DP        1|0:100:31      1|1:69:27       1|1:100:79
+11     118977880       rs58254953      A       G       .       PASS    AA=A;DP=107     GT:GQ:DP        1|0:100:31      1|1:72:24       1|1:100:50
+16     6445634 rs2429653       C       T       .       PASS    AA=T;DP=123     GT:GQ:DP        1|0:100:31      1|1:72:24       1|1:100:58
+17     30770914        rs722374        G       A       .       PASS    AA=A;DP=131     GT:GQ:DP        1|0:100:31      1|1:72:25       1|1:100:75
+4      190535560       rs12503144      G       A       .       PASS    AA=A;DP=140     GT:GQ:DP        1|0:100:31      1|1:75:25       1|1:100:86
+14     44089089        rs9323100       C       T       .       PASS    AA=T;DP=111     GT:GQ:DP        1|0:100:31      1|1:78:26       1|1:100:53
+16     76013030        rs919374        A       G       .       PASS    AA=A;DP=125     GT:GQ:DP        1|0:100:31      1|1:78:26       1|1:100:72
+3      127393888       rs1868135       A       G       .       PASS    AA=a;DP=116     GT:GQ:DP        1|0:100:31      1|1:78:27       1|1:100:55
+2      113586025       rs315930        C       A       .       PASS    AA=c;DP=118     GT:GQ:DP        1|0:100:31      1|1:84:28       1|1:100:48
+9      591552  rs2804295       A       G       .       PASS    AA=A;DP=110     GT:GQ:DP        1|0:100:31      1|1:84:29       1|1:100:40
+6      147485173       rs9497707       T       C       .       PASS    AA=C;DP=110     GT:GQ:DP        1|0:100:31      1|1:84:29       1|1:100:51
+1      244180765       rs10802302      G       C       .       PASS    AA=C;DP=115;HM2;HM3     GT:GQ:DP        1|0:100:31      1|1:87:29       1|1:100:55
+7      131851769       rs156975        C       T       .       PASS    AA=T;DP=131     GT:GQ:DP        1|0:100:31      1|1:87:29       1|1:100:73
+10     73171380        rs1227052       C       T       .       PASS    AA=T;DP=146     GT:GQ:DP        1|0:100:31      1|1:93:31       1|1:100:83
+11     94320678        rs1486223       G       A       .       PASS    AA=A;DP=138     GT:GQ:DP        1|0:100:31      1|1:96:32       1|1:100:75
+19     37797583        rs392332        G       A       .       PASS    AA=G;DP=150     GT:GQ:DP        1|0:100:31      1|1:96:34       1|1:99:34
+2      153269373       .       G       A       .       PASS    AA=G;DP=128     GT:GQ:DP        1|0:100:32      0|0:100:33      1|0:100:63
+11     7416642 .       C       T       .       PASS    AA=C;DP=152     GT:GQ:DP        1|0:100:32      0|0:100:34      1|0:100:84
+15     74436249        rs16968123      G       A       .       PASS    AA=G;DP=138     GT:GQ:DP        1|0:100:32      0|0:100:35      1|0:100:71
+7      9002411 .       T       A       .       PASS    AA=T;DP=146     GT:GQ:DP        1|0:100:32      0|0:100:36      1|0:100:41
+1      187838985       .       C       T       .       PASS    AA=C;DP=135     GT:GQ:DP        1|0:100:32      0|0:100:36      1|0:100:67
+6      164779644       rs7750917       A       G       .       PASS    AA=G;DP=147     GT:GQ:DP        1|0:100:32      0|0:100:36      1|0:100:81
+8      27562328        .       G       C       .       PASS    AA=G;DP=152     GT:GQ:DP        1|0:100:32      0|0:100:36      1|0:100:87
+7      141616460       rs4236474       C       T       .       PASS    AA=C;DP=124     GT:GQ:DP        1|0:100:32      0|0:100:37      1|0:100:53
+1      88255886        rs6428626       T       A       .       PASS    AA=T;DP=129;HM2 GT:GQ:DP        1|0:100:32      0|0:100:37      1|0:100:60
+16     52471887        .       G       A       .       PASS    AA=G;DP=134     GT:GQ:DP        1|0:100:32      0|0:100:38      1|0:100:61
+10     36476928        rs11010522      T       C       .       PASS    AA=C;DP=138     GT:GQ:DP        1|0:100:32      0|0:100:38      1|0:100:68
+8      52764964        .       T       A       .       PASS    AA=T;DP=152     GT:GQ:DP        1|0:100:32      0|0:100:39      1|0:100:84
+9      19930002        .       A       C       .       PASS    AA=A;DP=175     GT:GQ:DP        1|0:100:32      0|0:100:47      1|0:100:99
+1      53587766        .       G       A       .       PASS    AA=g;DP=112     GT:GQ:DP        1|0:100:32      0|0:10:15       1|0:100:65
+22     43681315        rs6007380       G       A       .       PASS    AA=g;DP=122     GT:GQ:DP        1|0:100:32      0|0:15:15       1|0:100:74
+16     28928564        .       C       G       .       PASS    AA=c;DP=95      GT:GQ:DP        1|0:100:32      0|0:17:5        1|0:100:59
+18     22775883        rs57465464      T       G       .       PASS    AA=T;DP=95      GT:GQ:DP        1|0:100:32      0|0:20:11       1|0:100:52
+3      148159280       .       G       A       .       PASS    AA=G;DP=105     GT:GQ:DP        1|0:100:32      0|0:21:17       1|0:100:62
+17     2745067 rs12450785      G       A       .       PASS    AA=G;DP=126     GT:GQ:DP        1|0:100:32      0|0:22:17       1|0:100:75
+20     14725977        rs59030889      G       T       .       PASS    AA=G;DP=123     GT:GQ:DP        1|0:100:32      0|0:22:20       1|0:100:72
+15     44724351        .       T       C       .       PASS    AA=T;DP=114     GT:GQ:DP        1|0:100:32      0|0:26:19       1|0:100:65
+3      12263179        .       C       T       .       PASS    AA=C;DP=126     GT:GQ:DP        1|0:100:32      0|0:26:19       1|0:100:75
+18     44043949        rs8088548       C       A       .       PASS    AA=C;DP=128     GT:GQ:DP        1|0:100:32      0|0:26:19       1|0:100:76
+12     129760230       rs1195592       C       G       .       PASS    AA=c;DP=116     GT:GQ:DP        1|0:100:32      0|0:29:9        1|0:100:75
+19     43228940        .       G       A       .       PASS    AA=g;DP=114     GT:GQ:DP        1|0:100:32      0|0:32:10       1|0:100:70
+2      50733529        rs12995518      C       T       .       PASS    AA=T;DP=119     GT:GQ:DP        1|0:100:32      0|0:33:20       1|0:100:66
+2      42954246        .       A       T       .       PASS    AA=A;DP=117     GT:GQ:DP        1|0:100:32      0|0:34:21       1|0:100:66
+14     67857634        rs7146850       A       C       .       PASS    AA=C;DP=120     GT:GQ:DP        1|0:100:32      0|0:35:21       1|0:100:67
+3      179601610       .       A       C       .       PASS    AA=A;DP=110     GT:GQ:DP        1|0:100:32      0|0:36:19       1|0:100:60
+5      136463382       rs7701979       G       T       .       PASS    AA=g;DP=127     GT:GQ:DP        1|0:100:32      0|0:36:19       1|0:100:74
+12     93560628        rs12813077      A       T       .       PASS    AA=A;DP=157     GT:GQ:DP        1|0:100:32      0|0:36:22       1|0:100:59
+3      63067699        rs2084330       G       T       .       PASS    AA=G;DP=106     GT:GQ:DP        1|0:100:32      0|0:37:16       1|0:100:58
+20     46271450        rs852363        C       G       .       PASS    AA=C;DP=110     GT:GQ:DP        1|0:100:32      0|0:38:12       1|0:100:68
+20     34447147        rs2425237       G       A       .       PASS    AA=G;DP=131     GT:GQ:DP        1|0:100:32      0|0:38:12       1|0:100:86
+12     51247484        rs3858633       C       G       .       PASS    AA=C;DP=138     GT:GQ:DP        1|0:100:32      0|0:38:13       1|0:100:51
+1      4100906 rs16840837      G       A       .       PASS    AA=G;DP=101     GT:GQ:DP        1|0:100:32      0|0:38:13       1|0:100:53
+21     44658752        rs1005172       G       A       .       PASS    AA=A;DP=129     GT:GQ:DP        1|0:100:32      0|0:38:13       1|0:100:76
+6      106338581       rs6936266       G       T       .       PASS    AA=G;DP=131     GT:GQ:DP        1|0:100:32      0|0:39:23       1|0:100:75
+6      48995327        rs57284223      C       G       .       PASS    AA=C;DP=107     GT:GQ:DP        1|0:100:32      0|0:40:18       1|0:100:59
+1      113080101       rs7527662       C       G       .       PASS    AA=C;DP=124;HM2 GT:GQ:DP        1|0:100:32      0|0:40:24       1|0:100:67
+17     20995900        rs9635801       T       G       .       PASS    AA=T;DP=137     GT:GQ:DP        1|0:100:32      0|0:40:24       1|0:100:85
+2      128821428       .       G       T       .       PASS    AA=G;DP=103     GT:GQ:DP        1|0:100:32      0|0:41:13       1|0:100:59
+6      4890567 rs11756225      G       A       .       PASS    AA=G;DP=134     GT:GQ:DP        1|0:100:32      0|0:41:14       1|0:100:47
+18     61748435        rs2541829       G       A       .       PASS    AA=A;DP=113     GT:GQ:DP        1|0:100:32      0|0:41:14       1|0:100:67
+2      60701788        rs34756797      T       C       .       PASS    AA=C;DP=98      GT:GQ:DP        1|0:100:32      0|0:41:15       1|0:100:53
+2      149549209       rs59917408      G       A       .       PASS    AA=A;DP=142     GT:GQ:DP        1|0:100:32      0|0:42:19       1|0:100:42
+6      153174756       .       T       C       .       PASS    AA=T;DP=106     GT:GQ:DP        1|0:100:32      0|0:42:23       1|0:44:52
+2      65152804        rs2723089       G       C       .       PASS    AA=G;DP=125     GT:GQ:DP        1|0:100:32      0|0:43:24       1|0:100:69
+14     97634520        rs58646885      C       A       .       PASS    AA=C;DP=124     GT:GQ:DP        1|0:100:32      0|0:43:29       1|0:100:42
+2      239754075       rs61266026      G       C       .       PASS    AA=G;DP=102     GT:GQ:DP        1|0:100:32      0|0:44:14       1|0:100:47
+9      138286471       .       C       T       .       PASS    AA=T;DP=108     GT:GQ:DP        1|0:100:32      0|0:44:14       1|0:100:49
+17     29718874        rs1437218       A       G       .       PASS    AA=G;DP=103     GT:GQ:DP        1|0:100:32      0|0:44:14       1|0:100:56
+17     6087335 rs3865360       A       G       .       PASS    AA=A;DP=115     GT:GQ:DP        1|0:100:32      0|0:44:14       1|0:100:57
+8      94461251        .       G       A       .       PASS    AA=A;DP=80      GT:GQ:DP        1|0:100:32      0|0:44:15       1|0:100:24
+18     31036206        rs17646155      T       C       .       PASS    AA=T;DP=109     GT:GQ:DP        1|0:100:32      0|0:44:16       1|0:100:61
+7      106440379       .       A       G       .       PASS    AA=A;DP=121     GT:GQ:DP        1|0:100:32      0|0:44:29       1|0:100:61
+11     69189372        rs11263527      A       G       .       PASS    AA=G;DP=144     GT:GQ:DP        1|0:100:32      0|0:44:29       1|0:100:84
+17     9682332 .       A       G       .       PASS    AA=A;DP=127     GT:GQ:DP        1|0:100:32      0|0:45:19       1|0:100:79
+4      97038575        .       T       A       .       PASS    AA=T;DP=122     GT:GQ:DP        1|0:100:32      0|0:46:26       1|0:100:66
+1      197228703       .       C       T       .       PASS    AA=C;DP=103     GT:GQ:DP        1|0:100:32      0|0:47:15       1|0:100:46
+15     29532357        .       C       A       .       PASS    AA=c;DP=108     GT:GQ:DP        1|0:100:32      0|0:47:15       1|0:100:61
+11     58867079        .       T       G       .       PASS    AA=T;DP=108     GT:GQ:DP        1|0:100:32      0|0:47:15       1|0:100:62
+11     22778631        rs57862275      G       A       .       PASS    AA=G;DP=128     GT:GQ:DP        1|0:100:32      0|0:47:15       1|0:100:81
+11     7319116 rs11041324      T       A       .       PASS    AA=T;DP=122     GT:GQ:DP        1|0:100:32      0|0:47:16       1|0:100:70
+10     13771730        rs11598761      A       C       .       PASS    AA=A;DP=101     GT:GQ:DP        1|0:100:32      0|0:49:21       1|0:100:38
+3      27805721        .       T       G       .       PASS    AA=T;DP=134     GT:GQ:DP        1|0:100:32      0|0:49:27       1|0:100:75
+10     54230954        .       C       T       .       PASS    AA=T;DP=101     GT:GQ:DP        1|0:100:32      0|0:50:16       1|0:100:46
+14     74649396        rs3742773       A       G       .       PASS    AA=A;DP=110     GT:GQ:DP        1|0:100:32      0|0:50:16       1|0:100:62
+2      31050061        rs12611898      C       T       .       PASS    AA=C;DP=112     GT:GQ:DP        1|0:100:32      0|0:50:16       1|0:100:65
+10     72718960        rs10762436      T       C       .       PASS    AA=C;DP=121     GT:GQ:DP        1|0:100:32      0|0:50:16       1|0:100:72
+5      153948164       rs55996413      C       T       .       PASS    AA=C;DP=125     GT:GQ:DP        1|0:100:32      0|0:50:16       1|0:100:76
+1      20123112        rs818965        G       A       .       PASS    AA=A;DP=102;HM2 GT:GQ:DP        1|0:100:32      0|0:50:17       1|0:100:40
+3      42683870        rs57179407      C       T       .       PASS    AA=C;DP=105     GT:GQ:DP        1|0:100:32      0|0:50:17       1|0:100:44
+17     65259349        .       C       A       .       PASS    AA=C;DP=113     GT:GQ:DP        1|0:100:32      0|0:50:17       1|0:100:63
+12     52656375        rs3816153       G       T       .       PASS    AA=G;DP=115     GT:GQ:DP        1|0:100:32      0|0:50:17       1|0:100:65
+12     4441946 .       T       A       .       PASS    AA=T;DP=115     GT:GQ:DP        1|0:100:32      0|0:50:17       1|0:100:66
+5      72777468        .       C       T       .       PASS    AA=C;DP=117     GT:GQ:DP        1|0:100:32      0|0:50:17       1|0:100:68
+22     16783622        .       A       G       .       PASS    AA=G;DP=117     GT:GQ:DP        1|0:100:32      0|0:50:17       1|0:100:70
+9      12892068        rs11791646      T       C       .       PASS    AA=T;DP=106     GT:GQ:DP        1|0:100:32      0|0:50:18       1|0:100:57
+8      18940763        rs28548734      G       A       .       PASS    AA=G;DP=117     GT:GQ:DP        1|0:100:32      0|0:50:18       1|0:100:69
+8      33209471        .       G       A       .       PASS    AA=G;DP=125     GT:GQ:DP        1|0:100:32      0|0:50:22       1|0:100:72
+4      15347035        rs4538475       A       G       .       PASS    AA=A;DP=92      GT:GQ:DP        1|0:100:32      0|0:53:17       1|0:100:35
+13     69907554        rs12428483      A       G       .       PASS    AA=A;DP=101     GT:GQ:DP        1|0:100:32      0|0:53:17       1|0:100:54
+16     4208314 rs2386884       A       G       .       PASS    AA=G;DP=123     GT:GQ:DP        1|0:100:32      0|0:53:17       1|0:100:75
+18     49185236        rs10515961      A       G       .       PASS    AA=A;DP=110     GT:GQ:DP        1|0:100:32      0|0:53:18       1|0:100:64
+4      3825427 rs28470999      T       C       .       PASS    AA=T;DP=126     GT:GQ:DP        1|0:100:32      0|0:53:18       1|0:100:77
+22     21058720        rs59171827      A       G       .       PASS    AA=.;DP=127     GT:GQ:DP        1|0:100:32      0|0:53:19       1|0:100:71
+3      102256782       .       A       G       .       PASS    AA=A;DP=120     GT:GQ:DP        1|0:100:32      0|0:53:20       1|0:100:65
+3      2217482 rs2140361       A       G       .       PASS    AA=A;DP=127     GT:GQ:DP        1|0:100:32      0|0:53:20       1|0:100:73
+16     82428669        .       G       A       .       PASS    AA=A;DP=126     GT:GQ:DP        1|0:100:32      0|0:53:21       1|0:100:77
+11     107493067       .       A       G       .       PASS    AA=A;DP=128     GT:GQ:DP        1|0:100:32      0|0:54:24       1|0:100:73
+1      179115128       .       C       T       .       PASS    AA=C;DP=142     GT:GQ:DP        1|0:100:32      0|0:55:29       1|0:100:82
+7      28811592        rs2282912       A       G       .       PASS    AA=G;DP=104     GT:GQ:DP        1|0:100:32      0|0:56:18       1|0:100:56
+2      222356945       .       A       G       .       PASS    AA=A;DP=109     GT:GQ:DP        1|0:100:32      0|0:56:18       1|0:100:61
+4      130257479       .       A       G       .       PASS    AA=A;DP=111     GT:GQ:DP        1|0:100:32      0|0:56:18       1|0:100:61
+11     101558575       .       A       G       .       PASS    AA=A;DP=111     GT:GQ:DP        1|0:100:32      0|0:56:18       1|0:100:63
+3      33384626        .       A       G       .       PASS    AA=A;DP=116     GT:GQ:DP        1|0:100:32      0|0:56:19       1|0:100:60
+15     95716450        .       A       T       .       PASS    AA=A;DP=114     GT:GQ:DP        1|0:100:32      0|0:56:19       1|0:100:64
+12     131943065       rs2306539       G       A       .       PASS    AA=G;DP=129     GT:GQ:DP        1|0:100:32      0|0:56:19       1|0:100:77
+10     70234535        .       G       T       .       PASS    AA=g;DP=129     GT:GQ:DP        1|0:100:32      0|0:56:19       1|0:100:80
+4      38610644        rs35374509      T       C       .       PASS    AA=T;DP=108     GT:GQ:DP        1|0:100:32      0|0:56:20       1|0:100:57
+17     69448812        .       G       A       .       PASS    AA=G;DP=139     GT:GQ:DP        1|0:100:32      0|0:56:25       1|0:100:45
+8      14514234        rs2136729       G       T       .       PASS    AA=T;DP=123     GT:GQ:DP        1|0:100:32      0|0:57:23       1|0:100:69
+17     19707583        rs3101810       G       A       .       PASS    AA=A;DP=134     GT:GQ:DP        1|0:100:32      0|0:57:24       1|0:100:78
+14     94515729        rs7141572       G       A       .       PASS    AA=G;DP=128     GT:GQ:DP        1|0:100:32      0|0:58:23       1|0:100:74
+15     47883469        .       A       T       .       PASS    AA=A;DP=112     GT:GQ:DP        1|0:100:32      0|0:59:19       1|0:100:48
+15     87445381        .       A       G       .       PASS    AA=A;DP=131     GT:GQ:DP        1|0:100:32      0|0:59:19       1|0:100:81
+6      159493598       .       A       C       .       PASS    AA=A;DP=130     GT:GQ:DP        1|0:100:32      0|0:59:19       1|0:100:85
+15     64653808        rs1866749       C       T       .       PASS    AA=C;DP=107     GT:GQ:DP        1|0:100:32      0|0:59:20       1|0:100:53
+19     13788809        rs8105290       A       G       .       PASS    AA=A;DP=105     GT:GQ:DP        1|0:100:32      0|0:59:20       1|0:100:53
+11     39900542        rs12270443      T       C       .       PASS    AA=T;DP=107     GT:GQ:DP        1|0:100:32      0|0:59:20       1|0:100:54
+4      186803981       rs3736194       A       G       .       PASS    AA=G;DP=115     GT:GQ:DP        1|0:100:32      0|0:59:20       1|0:100:66
+12     68762243        .       G       A       .       PASS    AA=G;DP=121     GT:GQ:DP        1|0:100:32      0|0:59:20       1|0:100:69
+1      110597724       .       G       A       .       PASS    AA=G;DP=122     GT:GQ:DP        1|0:100:32      0|0:59:20       1|0:100:72
+1      176693612       .       G       A       .       PASS    AA=G;DP=142     GT:GQ:DP        1|0:100:32      0|0:59:20       1|0:100:92
+12     64634936        .       T       C       .       PASS    AA=T;DP=119     GT:GQ:DP        1|0:100:32      0|0:59:21       1|0:100:68
+18     74239211        rs58333855      C       T       .       PASS    AA=T;DP=129     GT:GQ:DP        1|0:100:32      0|0:59:21       1|0:100:75
+9      27644522        .       T       C       .       PASS    AA=T;DP=114     GT:GQ:DP        1|0:100:32      0|0:59:25       1|0:100:60
+1      112380686       rs4088223       G       A       .       PASS    AA=g;DP=146;HM2;HM3     GT:GQ:DP        1|0:100:32      0|0:59:25       1|0:100:88
+1      187073064       .       C       T       .       PASS    AA=C;DP=140     GT:GQ:DP        1|0:100:32      0|0:60:31       1|0:100:72
+9      120015014       .       G       A       .       PASS    AA=G;DP=103     GT:GQ:DP        1|0:100:32      0|0:62:20       1|0:100:48
+10     131854971       rs3736900       C       G       .       PASS    AA=C;DP=101     GT:GQ:DP        1|0:100:32      0|0:62:20       1|0:100:49
+14     66166891        .       T       A       .       PASS    AA=T;DP=104     GT:GQ:DP        1|0:100:32      0|0:62:20       1|0:100:51
+4      92965897        rs28642971      A       G       .       PASS    AA=A;DP=115     GT:GQ:DP        1|0:100:32      0|0:62:20       1|0:100:67
+7      63236170        rs892592        G       A       .       PASS    AA=.;DP=125     GT:GQ:DP        1|0:100:32      0|0:62:20       1|0:100:67
+11     106627839       rs4509727       A       G       .       PASS    AA=G;DP=123     GT:GQ:DP        1|0:100:32      0|0:62:20       1|0:100:69
+20     36632257        .       A       G       .       PASS    AA=A;DP=121     GT:GQ:DP        1|0:100:32      0|0:62:20       1|0:100:69
+1      69553521        rs59251823      C       A       .       PASS    AA=C;DP=146     GT:GQ:DP        1|0:100:32      0|0:62:20       1|0:100:94
+14     75611425        rs3813549       T       C       .       PASS    AA=C;DP=129     GT:GQ:DP        1|0:100:32      0|0:62:21       1|0:100:72
+1      154636295       rs7542554       T       A       .       PASS    AA=T;DP=127;HM2 GT:GQ:DP        1|0:100:32      0|0:62:21       1|0:100:77
+3      40334009        rs2123998       G       C       .       PASS    AA=G;DP=132     GT:GQ:DP        1|0:100:32      0|0:62:22       1|0:100:38
+20     6176258 rs57626644      C       T       .       PASS    AA=C;DP=133     GT:GQ:DP        1|0:100:32      0|0:62:22       1|0:100:82
+4      99914336        rs17028063      T       C       .       PASS    AA=T;DP=134     GT:GQ:DP        1|0:100:32      0|0:62:22       1|0:100:82
+11     60289284        .       G       T       .       PASS    AA=G;DP=143     GT:GQ:DP        1|0:100:32      0|0:62:26       1|0:100:84
+17     36916060        rs9916359       A       G       .       PASS    AA=A;DP=138     GT:GQ:DP        1|0:100:32      0|0:62:28       1|0:100:79
+8      51213349        .       C       T       .       PASS    AA=C;DP=135     GT:GQ:DP        1|0:100:32      0|0:65:21       1|0:100:41
+2      2776461 rs13017799      G       A       .       PASS    AA=g;DP=110     GT:GQ:DP        1|0:100:32      0|0:65:21       1|0:100:57
+8      62324173        .       C       T       .       PASS    AA=C;DP=114     GT:GQ:DP        1|0:100:32      0|0:65:21       1|0:100:60
+5      72096730        rs34782328      T       C       .       PASS    AA=C;DP=116     GT:GQ:DP        1|0:100:32      0|0:65:21       1|0:100:66
+2      6261129 rs12473592      T       C       .       PASS    AA=T;DP=119     GT:GQ:DP        1|0:100:32      0|0:65:21       1|0:100:68
+3      125644857       rs3732612       T       C       .       PASS    AA=T;DP=124     GT:GQ:DP        1|0:100:32      0|0:65:21       1|0:100:72
+1      160480119       rs10399680      T       C       .       PASS    AA=T;DP=126;HM2 GT:GQ:DP        1|0:100:32      0|0:65:21       1|0:100:73
+13     61775531        .       A       G       .       PASS    AA=A;DP=137     GT:GQ:DP        1|0:100:32      0|0:65:21       1|0:100:84
+3      63207553        .       A       G       .       PASS    AA=A;DP=110     GT:GQ:DP        1|0:100:32      0|0:65:22       1|0:100:55
+22     21772332        .       T       C       .       PASS    AA=T;DP=119     GT:GQ:DP        1|0:100:32      0|0:65:22       1|0:100:64
+4      99271170        rs6532723       A       T       .       PASS    AA=A;DP=119     GT:GQ:DP        1|0:100:32      0|0:65:22       1|0:100:70
+5      57879663        rs7720795       G       A       .       PASS    AA=G;DP=137     GT:GQ:DP        1|0:100:32      0|0:65:23       1|0:100:82
+16     6406784 rs1476829       G       A       .       PASS    AA=G;DP=145     GT:GQ:DP        1|0:100:32      0|0:65:23       1|0:100:89
+16     85185559        rs12711458      C       T       .       PASS    AA=c;DP=156     GT:GQ:DP        1|0:100:32      0|0:65:29       1|0:100:56
+7      34094442        .       C       T       .       PASS    AA=C;DP=127     GT:GQ:DP        1|0:100:32      0|0:66:26       1|0:100:57
+1      54447353        rs34117251      C       T       .       PASS    AA=C;DP=149     GT:GQ:DP        1|0:100:32      0|0:66:27       1|0:100:90
+5      59210807        rs57434558      T       C       .       PASS    AA=T;DP=109     GT:GQ:DP        1|0:100:32      0|0:68:22       1|0:100:55
+10     51705216        .       G       T       .       PASS    AA=G;DP=153     GT:GQ:DP        1|0:100:32      0|0:68:22       1|0:100:56
+2      217542547       rs1922010       C       A       .       PASS    AA=C;DP=128     GT:GQ:DP        1|0:100:32      0|0:68:22       1|0:100:75
+4      7206113 .       T       C       .       PASS    AA=C;DP=131     GT:GQ:DP        1|0:100:32      0|0:68:22       1|0:100:77
+5      125190929       rs10038118      G       A       .       PASS    AA=A;DP=132     GT:GQ:DP        1|0:100:32      0|0:68:22       1|0:100:82
+15     87800383        .       T       C       .       PASS    AA=T;DP=136     GT:GQ:DP        1|0:100:32      0|0:68:22       1|0:100:85
+2      55862886        rs62167688      C       A       .       PASS    AA=C;DP=138     GT:GQ:DP        1|0:100:32      0|0:68:22       1|0:100:85
+13     35746187        rs912927        T       C       .       PASS    AA=C;DP=133     GT:GQ:DP        1|0:100:32      0|0:68:23       1|0:100:76
+5      136199136       rs6859149       C       T       .       PASS    AA=C;DP=129     GT:GQ:DP        1|0:100:32      0|0:68:23       1|0:100:77
+14     60765120        rs55679738      G       A       .       PASS    AA=G;DP=106     GT:GQ:DP        1|0:100:32      0|0:68:28       1|0:100:46
+2      127458291       rs556902        T       C       .       PASS    AA=T;DP=126     GT:GQ:DP        1|0:100:32      0|0:69:23       1|0:100:71
+15     58872985        rs12591848      C       A       .       PASS    AA=C;DP=163     GT:GQ:DP        1|0:100:32      0|0:69:33       1|0:100:97
+7      3823070 rs6955230       C       A       .       PASS    AA=C;DP=158     GT:GQ:DP        1|0:100:32      0|0:69:34       1|0:100:49
+12     68303668        rs17106831      C       T       .       PASS    AA=C;DP=121     GT:GQ:DP        1|0:100:32      0|0:71:23       1|0:100:60
+9      28961781        rs57671825      C       T       .       PASS    AA=C;DP=121     GT:GQ:DP        1|0:100:32      0|0:71:23       1|0:100:62
+10     126238190       rs11245290      G       A       .       PASS    AA=G;DP=129     GT:GQ:DP        1|0:100:32      0|0:71:23       1|0:100:66
+8      63086456        rs344240        G       A       .       PASS    AA=G;DP=122     GT:GQ:DP        1|0:100:32      0|0:71:23       1|0:100:67
+13     51874611        .       A       G       .       PASS    AA=A;DP=131     GT:GQ:DP        1|0:100:32      0|0:71:23       1|0:100:73
+3      183270793       rs57257189      C       A       .       PASS    AA=A;DP=130     GT:GQ:DP        1|0:100:32      0|0:71:23       1|0:100:74
+16     14116312        rs7197916       G       A       .       PASS    AA=A;DP=128     GT:GQ:DP        1|0:100:32      0|0:71:23       1|0:100:77
+4      33318423        rs7694592       C       T       .       PASS    AA=G;DP=132     GT:GQ:DP        1|0:100:32      0|0:71:23       1|0:100:77
+18     55272253        rs17780019      A       G       .       PASS    AA=G;DP=123     GT:GQ:DP        1|0:100:32      0|0:71:24       1|0:100:69
+20     46478243        rs6125322       G       A       .       PASS    AA=G;DP=142     GT:GQ:DP        1|0:100:32      0|0:71:24       1|0:100:90
+10     57675638        rs2462443       C       T       .       PASS    AA=C;DP=116     GT:GQ:DP        1|0:100:32      0|0:71:26       1|0:100:58
+3      116535666       rs61122018      T       C       .       PASS    AA=T;DP=145     GT:GQ:DP        1|0:100:32      0|0:71:30       1|0:100:85
+12     48732670        rs685012        C       T       .       PASS    AA=C;DP=145     GT:GQ:DP        1|0:100:32      0|0:72:29       1|0:100:84
+11     90888422        rs7932120       G       T       .       PASS    AA=T;DP=131     GT:GQ:DP        1|0:100:32      0|0:74:24       1|0:100:79
+20     59382230        .       G       A       .       PASS    AA=G;DP=152     GT:GQ:DP        1|0:100:32      0|0:74:24       1|0:100:98
+21     24457849        .       C       T       .       PASS    AA=C;DP=122     GT:GQ:DP        1|0:100:32      0|0:74:25       1|0:100:65
+11     131574563       rs11824008      G       A       .       PASS    AA=A;DP=131     GT:GQ:DP        1|0:100:32      0|0:74:25       1|0:100:75
+7      20761032        .       T       G       .       PASS    AA=T;DP=103     GT:GQ:DP        1|0:100:32      0|0:77:25       1|0:100:48
+18     33939773        .       C       T       .       PASS    AA=C;DP=125     GT:GQ:DP        1|0:100:32      0|0:77:25       1|0:100:67
+2      31603218        rs1042578       C       T       .       PASS    AA=T;DP=125     GT:GQ:DP        1|0:100:32      0|0:77:25       1|0:100:67
+10     110452197       .       A       G       .       PASS    AA=A;DP=128     GT:GQ:DP        1|0:100:32      0|0:77:25       1|0:100:69
+20     2219460 rs59845978      C       T       .       PASS    AA=c;DP=125     GT:GQ:DP        1|0:100:32      0|0:77:25       1|0:100:70
+12     107486527       rs888549        C       G       .       PASS    AA=C;DP=135     GT:GQ:DP        1|0:100:32      0|0:77:25       1|0:100:82
+2      96959961        rs11680224      G       T       .       PASS    AA=g;DP=142     GT:GQ:DP        1|0:100:32      0|0:77:25       1|0:100:87
+3      134920361       rs59353183      C       T       .       PASS    AA=C;DP=156     GT:GQ:DP        1|0:100:32      0|0:77:26       1|0:100:100
+1      11152020        rs17036427      G       C       .       PASS    AA=G;DP=114;HM2 GT:GQ:DP        1|0:100:32      0|0:77:26       1|0:100:59
+9      111284415       .       C       T       .       PASS    AA=C;DP=126     GT:GQ:DP        1|0:100:32      0|0:77:26       1|0:100:69
+22     30814214        .       T       C       .       PASS    AA=T;DP=116     GT:GQ:DP        1|0:100:32      0|0:80:26       1|0:100:58
+10     34513449        rs642099        A       G       .       PASS    AA=A;DP=119     GT:GQ:DP        1|0:100:32      0|0:80:26       1|0:100:60
+3      131031349       .       T       C       .       PASS    AA=T;DP=122     GT:GQ:DP        1|0:100:32      0|0:80:26       1|0:100:61
+3      149465467       rs16860271      A       G       .       PASS    AA=A;DP=126     GT:GQ:DP        1|0:100:32      0|0:80:26       1|0:100:64
+4      154753271       rs16998879      A       G       .       PASS    AA=A;DP=132     GT:GQ:DP        1|0:100:32      0|0:80:26       1|0:100:75
+1      91659147        .       A       C       .       PASS    AA=A;DP=138     GT:GQ:DP        1|0:100:32      0|0:80:26       1|0:100:81
+1      42782203        rs12032119      C       T       .       PASS    AA=C;DP=132;HM2;HM3     GT:GQ:DP        1|0:100:32      0|0:80:27       1|0:100:75
+15     47053804        rs7174409       C       T       .       PASS    AA=C;DP=128     GT:GQ:DP        1|0:100:32      0|0:80:28       1|0:100:69
+1      178861052       rs12759582      G       C       .       PASS    AA=G;DP=150;HM2;HM3     GT:GQ:DP        1|0:100:32      0|0:80:30       1|0:100:43
+4      88824862        .       A       G       .       PASS    AA=A;DP=155     GT:GQ:DP        1|0:100:32      0|0:83:27       1|0:100:47
+8      69886493        rs2958322       G       A       .       PASS    AA=G;DP=126     GT:GQ:DP        1|0:100:32      0|0:83:27       1|0:100:67
+13     69385438        rs7328492       A       G       .       PASS    AA=A;DP=133     GT:GQ:DP        1|0:100:32      0|0:83:27       1|0:100:75
+2      71189891        .       A       G       .       PASS    AA=A;DP=138     GT:GQ:DP        1|0:100:32      0|0:83:27       1|0:100:82
+3      105700084       rs6437517       T       C       .       PASS    AA=T;DP=116     GT:GQ:DP        1|0:100:32      0|0:83:28       1|0:100:57
+4      156993256       .       G       C       .       PASS    AA=G;DP=132     GT:GQ:DP        1|0:100:32      0|0:83:28       1|0:100:73
+5      84784725        rs485309        T       C       .       PASS    AA=T;DP=141     GT:GQ:DP        1|0:100:32      0|0:83:28       1|0:100:85
+7      98231711        .       G       A       .       PASS    AA=G;DP=130     GT:GQ:DP        1|0:100:32      0|0:83:29       1|0:100:75
+19     16258630        .       G       C       .       PASS    AA=G;DP=132     GT:GQ:DP        1|0:100:32      0|0:83:31       1|0:100:70
+6      38798043        rs3807047       A       G       .       PASS    AA=G;DP=136     GT:GQ:DP        1|0:100:32      0|0:86:28       1|0:100:76
+20     4664802 .       C       T       .       PASS    AA=C;DP=144     GT:GQ:DP        1|0:100:32      0|0:86:28       1|0:100:84
+13     96729241        rs2389822       A       T       .       PASS    AA=A;DP=152     GT:GQ:DP        1|0:100:32      0|0:86:28       1|0:100:93
+9      102650962       .       A       G       .       PASS    AA=A;DP=111     GT:GQ:DP        1|0:100:32      0|0:86:28       1|0:90:25
+20     8062261 rs6140545       T       A       .       PASS    AA=T;DP=142     GT:GQ:DP        1|0:100:32      0|0:86:29       1|0:100:37
+1      116448610       .       A       G       .       PASS    AA=A;DP=155     GT:GQ:DP        1|0:100:32      0|0:86:29       1|0:100:50
+1      179577649       rs59292540      G       A       .       PASS    AA=G;DP=163     GT:GQ:DP        1|0:100:32      0|0:86:29       1|0:100:57
+10     71696753        rs57147717      T       C       .       PASS    AA=T;DP=154     GT:GQ:DP        1|0:100:32      0|0:86:29       1|0:100:86
+15     86467375        rs4887208       G       C       .       PASS    AA=G;DP=132     GT:GQ:DP        1|0:100:32      0|0:86:31       1|0:100:66
+5      157515897       .       T       A       .       PASS    AA=T;DP=117     GT:GQ:DP        1|0:100:32      0|0:89:29       1|0:100:56
+7      6605471 rs11763814      C       A       .       PASS    AA=C;DP=119     GT:GQ:DP        1|0:100:32      0|0:89:29       1|0:100:61
+9      85869071        rs10868091      T       C       .       PASS    AA=T;DP=129     GT:GQ:DP        1|0:100:32      0|0:89:29       1|0:100:67
+4      36129666        .       A       G       .       PASS    AA=A;DP=130     GT:GQ:DP        1|0:100:32      0|0:89:29       1|0:100:69
+4      86873813        rs4507354       C       G       .       PASS    AA=C;DP=130     GT:GQ:DP        1|0:100:32      0|0:89:29       1|0:100:71
+3      109372994       rs11917405      T       C       .       PASS    AA=T;DP=144     GT:GQ:DP        1|0:100:32      0|0:89:29       1|0:100:83
+3      16214067        rs6799256       G       A       .       PASS    AA=A;DP=145     GT:GQ:DP        1|0:100:32      0|0:89:29       1|0:100:85
+10     132857303       rs10829940      G       C       .       PASS    AA=G;DP=159     GT:GQ:DP        1|0:100:32      0|0:89:29       1|0:100:89
+13     47227642        rs9595774       A       G       .       PASS    AA=A;DP=119     GT:GQ:DP        1|0:100:32      0|0:89:30       1|0:100:57
+11     11843635        .       T       C       .       PASS    AA=T;DP=119     GT:GQ:DP        1|0:100:32      0|0:92:30       1|0:100:56
+17     57485361        .       T       G       .       PASS    AA=T;DP=129     GT:GQ:DP        1|0:100:32      0|0:92:30       1|0:100:67
+4      186307648       .       C       T       .       PASS    AA=C;DP=137     GT:GQ:DP        1|0:100:32      0|0:92:30       1|0:100:76
+16     53974400        rs6499757       C       T       .       PASS    AA=C;DP=137     GT:GQ:DP        1|0:100:32      0|0:92:30       1|0:100:77
+5      65199405        .       G       A       .       PASS    AA=G;DP=134     GT:GQ:DP        1|0:100:32      0|0:92:30       1|0:100:77
+17     26266293        .       A       G       .       PASS    AA=A;DP=140     GT:GQ:DP        1|0:100:32      0|0:92:30       1|0:100:78
+5      148593382       rs10079296      C       T       .       PASS    AA=C;DP=142     GT:GQ:DP        1|0:100:32      0|0:92:31       1|0:100:38
+7      31044407        rs57191462      G       A       .       PASS    AA=G;DP=140     GT:GQ:DP        1|0:100:32      0|0:92:31       1|0:100:79
+7      25906200        rs12672410      G       A       .       PASS    AA=G;DP=161     GT:GQ:DP        1|0:100:32      0|0:92:32       1|0:100:99
+2      192812990       rs1867801       T       C       .       PASS    AA=T;DP=116     GT:GQ:DP        1|0:100:32      0|0:95:31       1|0:100:50
+4      159183791       rs62335359      G       A       .       PASS    AA=G;DP=122     GT:GQ:DP        1|0:100:32      0|0:95:31       1|0:100:59
+1      64250432        rs12083122      T       C       .       PASS    AA=C;DP=133     GT:GQ:DP        1|0:100:32      0|0:95:31       1|0:100:68
+8      119227944       rs11562753      C       T       .       PASS    AA=C;DP=144     GT:GQ:DP        1|0:100:32      0|0:95:31       1|0:100:84
+8      67081677        rs7818219       G       A       .       PASS    AA=G;DP=120     GT:GQ:DP        1|0:100:32      0|0:95:32       1|0:100:44
+11     36702369        rs11033764      A       G       .       PASS    AA=A;DP=136     GT:GQ:DP        1|0:100:32      0|0:98:32       1|0:100:71
+9      121075813       rs10818292      A       G       .       PASS    AA=A;DP=155     GT:GQ:DP        1|0:100:32      0|0:98:32       1|0:100:90
+6      91256546        rs157685        T       C       .       PASS    AA=T;DP=123     GT:GQ:DP        1|0:100:32      0|0:98:34       1|0:100:47
+9      7487427 rs10119450      C       A       .       PASS    AA=A;DP=92      GT:GQ:DP        1|0:100:32      1|0:100:16      1|1:100:46
+1      173110147       .       G       A       .       PASS    AA=G;DP=148     GT:GQ:DP        1|0:100:32      1|0:100:16      1|1:100:55
+8      8296326 rs2945877       T       C       .       PASS    AA=C;DP=127     GT:GQ:DP        1|0:100:32      1|0:100:16      1|1:100:82
+7      118064109       rs1523801       T       C       .       PASS    AA=C;DP=103     GT:GQ:DP        1|0:100:32      1|0:100:17      1|1:100:57
+2      55824893        rs6740243       T       A       .       PASS    AA=T;DP=120     GT:GQ:DP        1|0:100:32      1|0:100:17      1|1:100:70
+15     31663181        rs11072551      G       A       .       PASS    AA=G;DP=95      GT:GQ:DP        1|0:100:32      1|0:100:17      1|1:82:45
+8      103208195       .       G       A       .       PASS    AA=A;DP=91      GT:GQ:DP        1|0:100:32      1|0:100:18      1|1:100:36
+1      23077608        rs6426771       A       G       .       PASS    AA=G;DP=123;HM2;HM3     GT:GQ:DP        1|0:100:32      1|0:100:18      1|1:100:73
+7      1891799 rs57871170      G       A       .       PASS    AA=A;DP=123     GT:GQ:DP        1|0:100:32      1|0:100:18      1|1:100:74
+7      107302760       rs2108230       C       T       .       PASS    AA=T;DP=101     GT:GQ:DP        1|0:100:32      1|0:100:19      1|1:100:46
+1      74750013        rs953567        A       G       .       PASS    AA=G;DP=110;HM2 GT:GQ:DP        1|0:100:32      1|0:100:19      1|1:100:60
+2      42034769        rs61387490      G       A       .       PASS    AA=G;DP=121     GT:GQ:DP        1|0:100:32      1|0:100:19      1|1:100:68
+11     134242701       rs34697112      T       C       .       PASS    AA=T;DP=124     GT:GQ:DP        1|0:100:32      1|0:100:19      1|1:100:73
+21     37243070        rs7276605       A       C       .       PASS    AA=C;DP=141     GT:GQ:DP        1|0:100:32      1|0:100:20      1|1:100:47
+16     1401174 rs56087175      T       C       .       PASS    AA=C;DP=114     GT:GQ:DP        1|0:100:32      1|0:100:20      1|1:100:62
+10     60880213        rs11006496      G       T       .       PASS    AA=G;DP=117     GT:GQ:DP        1|0:100:32      1|0:100:20      1|1:100:64
+17     28262564        rs2466839       C       G       .       PASS    AA=C;DP=130     GT:GQ:DP        1|0:100:32      1|0:100:21      1|1:100:71
+6      139243602       rs6902027       C       A       .       PASS    AA=G;DP=125     GT:GQ:DP        1|0:100:32      1|0:100:22      1|1:100:59
+6      52074158        rs12529686      T       C       .       PASS    AA=C;DP=115     GT:GQ:DP        1|0:100:32      1|0:100:22      1|1:100:60
+1      55363416        rs502793        G       A       .       PASS    AA=G;DP=114;HM2;HM3     GT:GQ:DP        1|0:100:32      1|0:100:22      1|1:100:62
+11     79940062        rs10501468      T       C       .       PASS    AA=C;DP=97      GT:GQ:DP        1|0:100:32      1|0:100:22      1|1:87:31
+15     21467747        rs6576635       T       C       .       PASS    AA=C;DP=107     GT:GQ:DP        1|0:100:32      1|0:100:23      1|1:100:52
+12     55210714        rs34948728      A       T       .       PASS    AA=A;DP=116     GT:GQ:DP        1|0:100:32      1|0:100:23      1|1:100:63
+14     87178941        rs17123638      T       G       .       PASS    AA=T;DP=128     GT:GQ:DP        1|0:100:32      1|0:100:23      1|1:100:75
+19     59884362        rs60318216      G       A       .       PASS    AA=A;DP=101     GT:GQ:DP        1|0:100:32      1|0:100:23      1|1:99:35
+1      15385719        rs12407705      A       G       .       PASS    AA=A;DP=124     GT:GQ:DP        1|0:100:32      1|0:100:24      1|1:100:70
+3      59641649        rs1281469       A       G       .       PASS    AA=G;DP=141     GT:GQ:DP        1|0:100:32      1|0:100:24      1|1:100:84
+2      36631876        rs848602        G       A       .       PASS    AA=G;DP=124     GT:GQ:DP        1|0:100:32      1|0:100:25      1|1:100:66
+2      163119776       rs7595538       A       G       .       PASS    AA=G;DP=127     GT:GQ:DP        1|0:100:32      1|0:100:25      1|1:100:70
+9      15181599        rs12554907      C       T       .       PASS    AA=C;DP=128     GT:GQ:DP        1|0:100:32      1|0:100:25      1|1:100:71
+16     17244249        rs57888144      T       G       .       PASS    AA=T;DP=133     GT:GQ:DP        1|0:100:32      1|0:100:25      1|1:94:77
+9      124804058       rs12337223      G       A       .       PASS    AA=G;DP=130     GT:GQ:DP        1|0:100:32      1|0:100:26      1|1:100:69
+12     125361265       rs2346560       T       C       .       PASS    AA=C;DP=151     GT:GQ:DP        1|0:100:32      1|0:100:26      1|1:100:90
+16     52163730        .       G       A       .       PASS    AA=G;DP=111     GT:GQ:DP        1|0:100:32      1|0:100:26      1|1:82:52
+4      73222755        rs16847523      T       G       .       PASS    AA=G;DP=111     GT:GQ:DP        1|0:100:32      1|0:100:27      1|1:100:54
+4      180950756       rs55855517      T       C       .       PASS    AA=T;DP=128     GT:GQ:DP        1|0:100:32      1|0:100:27      1|1:100:68
+12     93158318        .       T       C       .       PASS    AA=C;DP=177     GT:GQ:DP        1|0:100:32      1|0:100:27      1|1:100:71
+13     38678027        rs7330119       C       T       .       PASS    AA=T;DP=138     GT:GQ:DP        1|0:100:32      1|0:100:27      1|1:100:81
+4      94443495        rs7671753       G       T       .       PASS    AA=T;DP=137     GT:GQ:DP        1|0:100:32      1|0:100:27      1|1:100:82
+8      90392441        rs56887736      T       G       .       PASS    AA=T;DP=120     GT:GQ:DP        1|0:100:32      1|0:100:27      1|1:72:47
+5      95627678        rs12109041      T       G       .       PASS    AA=T;DP=166     GT:GQ:DP        1|0:100:32      1|0:100:29      1|1:100:63
+9      117379162       rs6478190       A       G       .       PASS    AA=A;DP=128     GT:GQ:DP        1|0:100:32      1|0:100:29      1|1:100:67
+4      694602  rs13136122      A       G       .       PASS    AA=A;DP=143     GT:GQ:DP        1|0:100:32      1|0:100:29      1|1:100:80
+6      29861708        rs1002044       T       A       .       PASS    AA=.;DP=130     GT:GQ:DP        1|0:100:32      1|0:100:30      1|1:85:69
+7      122795600       rs34590900      G       A       .       PASS    AA=G;DP=116     GT:GQ:DP        1|0:100:32      1|0:100:31      1|1:100:54
+15     56459057        rs1601935       G       T       .       PASS    AA=G;DP=145     GT:GQ:DP        1|0:100:32      1|0:100:31      1|1:100:83
+1      170046962       rs7537770       G       A       .       PASS    AA=G;DP=148;HM2;HM3     GT:GQ:DP        1|0:100:32      1|0:100:32      1|1:100:81
+3      31729342        rs9819360       C       A       .       PASS    AA=C;DP=141     GT:GQ:DP        1|0:100:32      1|0:100:33      1|1:100:66
+15     84401675        rs7161855       C       G       .       PASS    AA=C;DP=134     GT:GQ:DP        1|0:100:32      1|0:100:33      1|1:100:71
+8      56228066        rs11990385      G       C       .       PASS    AA=G;DP=140     GT:GQ:DP        1|0:100:32      1|0:100:33      1|1:100:76
+14     57359954        rs10142225      G       T       .       PASS    AA=G;DP=135     GT:GQ:DP        1|0:100:32      1|0:100:35      1|1:100:68
+20     24028087        rs1012783       C       G       .       PASS    AA=c;DP=159     GT:GQ:DP        1|0:100:32      1|0:100:45      1|1:100:80
+8      74078317        rs11993883      C       T       .       PASS    AA=A;DP=98      GT:GQ:DP        1|0:100:32      1|0:15:13       1|1:81:53
+6      50152957        rs2031362       G       A       .       PASS    AA=A;DP=103     GT:GQ:DP        1|0:100:32      1|0:37:25       1|1:91:49
+3      16715119        rs6809551       T       C       .       PASS    AA=T;DP=105     GT:GQ:DP        1|0:100:32      1|0:43:20       1|1:100:43
+1      30468783        rs59296486      T       C       .       PASS    AA=T;DP=111     GT:GQ:DP        1|0:100:32      1|0:44:20       1|1:100:59
+15     99409262        rs8039331       G       A       .       PASS    AA=G;DP=144     GT:GQ:DP        1|0:100:32      1|0:54:14       1|1:100:53
+5      136073409       .       T       A       .       PASS    AA=T;DP=136     GT:GQ:DP        1|0:100:32      1|0:56:20       1|1:100:68
+14     65483414        .       C       T       .       PASS    AA=C;DP=124     GT:GQ:DP        1|0:100:32      1|0:60:16       1|1:100:75
+13     38455585        rs6563661       G       A       .       PASS    AA=G;DP=105     GT:GQ:DP        1|0:100:32      1|0:61:16       1|1:100:55
+3      31820980        rs6789271       C       T       .       PASS    AA=T;DP=114     GT:GQ:DP        1|0:100:32      1|0:67:17       1|1:100:65
+6      158935103       rs7772871       A       G       .       PASS    AA=G;DP=128     GT:GQ:DP        1|0:100:32      1|0:72:24       1|1:100:72
+5      54545985        rs6871801       C       G       .       PASS    AA=G;DP=124     GT:GQ:DP        1|0:100:32      1|0:72:28       1|1:100:62
+10     5345513 rs7901845       C       T       .       PASS    AA=C;DP=104     GT:GQ:DP        1|0:100:32      1|0:75:13       1|1:90:59
+11     74955405        rs650241        C       G       .       PASS    AA=C;DP=94      GT:GQ:DP        1|0:100:32      1|0:77:11       1|1:87:39
+4      15541563        rs55770217      A       G       .       PASS    AA=A;DP=131     GT:GQ:DP        1|0:100:32      1|0:80:23       1|1:100:74
+2      184195243       rs59239382      C       T       .       PASS    AA=C;DP=118     GT:GQ:DP        1|0:100:32      1|0:81:15       1|1:100:68
+1      169658633       rs12402699      A       G       .       PASS    AA=A;DP=108     GT:GQ:DP        1|0:100:32      1|0:81:16       1|1:100:53
+2      203864108       rs6435178       G       A       .       PASS    AA=G;DP=92      GT:GQ:DP        1|0:100:32      1|0:82:12       1|1:76:38
+12     97732875        .       G       A       .       PASS    AA=G;DP=113     GT:GQ:DP        1|0:100:32      1|0:82:23       1|1:100:55
+6      30153710        rs9261306       T       C       .       PASS    AA=C;DP=122     GT:GQ:DP        1|0:100:32      1|0:83:19       1|1:100:70
+14     90774475        rs2540860       A       G       .       PASS    AA=G;DP=106     GT:GQ:DP        1|0:100:32      1|0:84:17       1|1:100:57
+10     43336832        rs1338569       C       T       .       PASS    AA=C;DP=125     GT:GQ:DP        1|0:100:32      1|0:88:19       1|1:100:73
+8      60440603        .       G       A       .       PASS    AA=G;DP=108     GT:GQ:DP        1|0:100:32      1|0:88:27       1|1:21:49
+1      91395609        rs10922967      T       C       .       PASS    AA=T;DP=95;HM2  GT:GQ:DP        1|0:100:32      1|0:89:16       1|1:100:36
+2      141266498       rs17515498      A       G       .       PASS    AA=A;DP=102     GT:GQ:DP        1|0:100:32      1|0:90:15       1|1:100:54
+16     52104710        rs7203644       C       T       .       PASS    AA=C;DP=119     GT:GQ:DP        1|0:100:32      1|0:90:20       1|1:100:63
+7      89072269        rs2188827       C       A       .       PASS    AA=C;DP=116     GT:GQ:DP        1|0:100:32      1|0:90:22       1|1:100:60
+11     21207776        rs1670638       T       C       .       PASS    AA=T;DP=145     GT:GQ:DP        1|0:100:32      1|0:93:29       1|1:100:87
+19     6405189 rs6510903       T       C       .       PASS    AA=C;DP=96      GT:GQ:DP        1|0:100:32      1|0:95:18       1|1:100:35
+5      14442469        rs7715916       C       T       .       PASS    AA=C;DP=106     GT:GQ:DP        1|0:100:32      1|0:98:16       1|1:100:57
+5      147558455       rs1432689       T       C       .       PASS    AA=T;DP=127     GT:GQ:DP        1|0:100:32      1|0:98:21       1|1:100:78
+11     127993064       rs2156697       T       C       .       PASS    AA=C;DP=111     GT:GQ:DP        1|0:100:32      1|0:99:20       1|1:100:59
+2      173479562       rs1344590       T       A       .       PASS    AA=T;DP=112     GT:GQ:DP        1|0:100:32      1|1:16:16       1|1:100:64
+2      23632648        rs2339788       A       G       .       PASS    AA=N;DP=129     GT:GQ:DP        1|0:100:32      1|1:19:11       1|1:100:84
+6      35501382        rs2076166       A       G       .       PASS    AA=G;DP=118     GT:GQ:DP        1|0:100:32      1|1:19:17       1|1:100:68
+4      84316821        rs2903916       G       T       .       PASS    AA=T;DP=136     GT:GQ:DP        1|0:100:32      1|1:20:17       1|1:100:84
+17     55262878        rs9904374       T       C       .       PASS    AA=T;DP=95      GT:GQ:DP        1|0:100:32      1|1:30:17       1|1:84:47
+2      46036928        rs2711305       T       G       .       PASS    AA=T;DP=104     GT:GQ:DP        1|0:100:32      1|1:35:18       1|1:100:54
+18     60349489        .       T       C       .       PASS    AA=t;DP=135     GT:GQ:DP        1|0:100:32      1|1:36:30       1|1:100:72
+4      3628242 rs177777        G       C       .       PASS    AA=C;DP=121     GT:GQ:DP        1|0:100:32      1|1:39:13       1|1:100:77
+16     6657143 rs8051188       A       T       .       PASS    AA=T;DP=105     GT:GQ:DP        1|0:100:32      1|1:39:14       1|1:100:59
+1      24267754        rs4336793       T       A       .       PASS    AA=T;DP=129     GT:GQ:DP        1|0:100:32      1|1:39:23       1|1:100:66
+6      64484853        rs4710437       A       G       .       PASS    AA=G;DP=126     GT:GQ:DP        1|0:100:32      1|1:41:19       1|1:100:76
+6      167067833       rs6456118       C       G       .       PASS    AA=C;DP=89      GT:GQ:DP        1|0:100:32      1|1:42:15       1|1:100:34
+22     24346746        rs6004723       A       G       .       PASS    AA=A;DP=128     GT:GQ:DP        1|0:100:32      1|1:42:15       1|1:100:85
+11     94122281        rs11821538      A       G       .       PASS    AA=A;DP=143     GT:GQ:DP        1|0:100:32      1|1:43:22       1|1:100:86
+17     60768555        rs4281770       C       A       .       PASS    AA=A;DP=123     GT:GQ:DP        1|0:100:32      1|1:44:30       1|1:100:61
+14     99166359        rs8013766       C       A       .       PASS    AA=C;DP=109     GT:GQ:DP        1|0:100:32      1|1:45:16       1|1:100:50
+13     58818571        rs9591987       T       C       .       PASS    AA=T;DP=112     GT:GQ:DP        1|0:100:32      1|1:48:16       1|1:100:62
+6      156377181       rs1449679       G       A       .       PASS    AA=A;DP=119     GT:GQ:DP        1|0:100:32      1|1:50:23       1|1:100:62
+6      56483611        rs9464389       C       T       .       PASS    AA=T;DP=99      GT:GQ:DP        1|0:100:32      1|1:51:17       1|1:100:39
+15     64939197        rs7495569       T       C       .       PASS    AA=C;DP=109     GT:GQ:DP        1|0:100:32      1|1:51:18       1|1:100:59
+3      84635281        rs9844070       C       G       .       PASS    AA=C;DP=103     GT:GQ:DP        1|0:100:32      1|1:51:20       1|1:100:50
+14     50891490        .       C       G       .       PASS    AA=C;DP=145     GT:GQ:DP        1|0:100:32      1|1:51:26       1|1:100:90
+2      180800083       rs2887175       C       A       .       PASS    AA=C;DP=141     GT:GQ:DP        1|0:100:32      1|1:53:29       1|1:100:81
+11     1727764 rs59571891      T       G       .       PASS    AA=G;DP=104     GT:GQ:DP        1|0:100:32      1|1:54:18       1|1:100:55
+15     50356553        rs16964849      C       G       .       PASS    AA=C;DP=121     GT:GQ:DP        1|0:100:32      1|1:54:18       1|1:100:67
+5      173612333       rs2082381       G       T       .       PASS    AA=G;DP=95      GT:GQ:DP        1|0:100:32      1|1:54:18       1|1:88:44
+6      21189185        rs4323302       C       T       .       PASS    AA=C;DP=98      GT:GQ:DP        1|0:100:32      1|1:54:18       1|1:92:48
+3      88264550        rs6551274       T       C       .       PASS    AA=T;DP=110     GT:GQ:DP        1|0:100:32      1|1:54:19       1|1:100:58
+3      5579385 rs1543278       A       G       .       PASS    AA=G;DP=117     GT:GQ:DP        1|0:100:32      1|1:54:20       1|1:100:64
+1      169534552       rs12745080      T       C       .       PASS    AA=C;DP=83;HM2  GT:GQ:DP        1|0:100:32      1|1:57:19       1|1:84:28
+6      35428426        rs7771323       A       G       .       PASS    AA=A;DP=109     GT:GQ:DP        1|0:100:32      1|1:57:20       1|1:100:58
+9      30068773        rs2360149       C       T       .       PASS    AA=T;DP=114     GT:GQ:DP        1|0:100:32      1|1:58:20       1|1:100:62
+11     117135901       rs2155386       A       C       .       PASS    AA=C;DP=96      GT:GQ:DP        1|0:100:32      1|1:60:20       1|1:100:46
+5      103286835       rs246373        C       T       .       PASS    AA=T;DP=134     GT:GQ:DP        1|0:100:32      1|1:60:20       1|1:100:86
+18     54172078        rs7243904       T       C       .       PASS    AA=T;DP=120     GT:GQ:DP        1|0:100:32      1|1:60:22       1|1:100:67
+6      11413921        rs16871234      C       T       .       PASS    AA=C;DP=126     GT:GQ:DP        1|0:100:32      1|1:60:22       1|1:100:71
+7      91155586        rs803279        C       T       .       PASS    AA=C;DP=119     GT:GQ:DP        1|0:100:32      1|1:61:29       1|1:100:57
+7      140572666       rs10242544      C       T       .       PASS    AA=C;DP=131     GT:GQ:DP        1|0:100:32      1|1:63:21       1|1:100:79
+5      110696947       rs1660940       G       A       .       PASS    AA=G;DP=95      GT:GQ:DP        1|0:100:32      1|1:63:21       1|1:80:37
+13     24503269        rs2487591       G       A       .       PASS    AA=G;DP=133     GT:GQ:DP        1|0:100:32      1|1:66:22       1|1:100:79
+8      10703584        rs2898245       G       A       .       PASS    AA=G;DP=124     GT:GQ:DP        1|0:100:32      1|1:69:23       1|1:100:70
+7      112358656       rs2197953       C       T       .       PASS    AA=T;DP=136     GT:GQ:DP        1|0:100:32      1|1:69:23       1|1:100:80
+2      43501680        rs10176241      A       G       .       PASS    AA=G;DP=127     GT:GQ:DP        1|0:100:32      1|1:69:24       1|1:100:69
+6      144081230       rs7757991       T       C       .       PASS    AA=T;DP=122     GT:GQ:DP        1|0:100:32      1|1:72:26       1|1:100:64
+12     24823086        rs7307109       A       T       .       PASS    AA=T;DP=130     GT:GQ:DP        1|0:100:32      1|1:73:33       1|1:100:64
+13     108707455       rs6492177       T       G       .       PASS    AA=G;DP=130     GT:GQ:DP        1|0:100:32      1|1:75:25       1|1:100:72
+1      173691409       rs859452        T       C       .       PASS    AA=T;DP=128;HM2 GT:GQ:DP        1|0:100:32      1|1:75:25       1|1:100:74
+10     10765494        rs7895677       A       G       .       PASS    AA=a;DP=109     GT:GQ:DP        1|0:100:32      1|1:78:26       1|1:100:49
+1      145356167       .       T       C       .       PASS    AA=C;DP=122;HM2 GT:GQ:DP        1|0:100:32      1|1:78:27       1|1:100:63
+20     17081062        rs708984        C       T       .       PASS    AA=C;DP=127     GT:GQ:DP        1|0:100:32      1|1:78:27       1|1:100:68
+13     110171369       rs1061386       G       C       .       PASS    AA=C;DP=137     GT:GQ:DP        1|0:100:32      1|1:78:28       1|1:100:37
+3      55463321        rs6445746       A       G       .       PASS    AA=A;DP=114     GT:GQ:DP        1|0:100:32      1|1:78:28       1|1:100:54
+20     15710430        rs6034288       G       A       .       PASS    AA=A;DP=111     GT:GQ:DP        1|0:100:32      1|1:81:27       1|1:100:48
+11     10875267        rs7123792       T       C       .       PASS    AA=C;DP=130     GT:GQ:DP        1|0:100:32      1|1:81:27       1|1:100:71
+7      141592806       rs1894313       G       T       .       PASS    AA=T;DP=139     GT:GQ:DP        1|0:100:32      1|1:84:33       1|1:100:69
+3      145412982       rs3866222       T       C       .       PASS    AA=C;DP=127     GT:GQ:DP        1|0:100:32      1|1:90:30       1|1:100:65
+4      9879108 rs4697997       T       C       .       PASS    AA=T;DP=127     GT:GQ:DP        1|0:100:32      1|1:93:32       1|1:100:62
+9      120372743       rs7874294       T       G       .       PASS    AA=G;DP=153     GT:GQ:DP        1|0:100:32      1|1:93:32       1|1:100:88
+4      167215797       rs2292082       A       G       .       PASS    AA=G;DP=155     GT:GQ:DP        1|0:100:32      1|1:93:32       1|1:100:90
+9      1624740 rs2065887       T       C       .       PASS    AA=T;DP=135     GT:GQ:DP        1|0:100:32      1|1:96:32       1|1:100:71
+1      206305217       rs2498034       T       C       .       PASS    AA=T;DP=158;HM2 GT:GQ:DP        1|0:100:33      0|0:100:33      1|0:100:92
+15     89322336        .       C       T       .       PASS    AA=C;DP=137     GT:GQ:DP        1|0:100:33      0|0:100:35      1|0:100:69
+12     80614397        .       T       C       .       PASS    AA=T;DP=135     GT:GQ:DP        1|0:100:33      0|0:100:36      1|0:100:60
+14     50106263        .       T       C       .       PASS    AA=T;DP=144     GT:GQ:DP        1|0:100:33      0|0:100:36      1|0:100:71
+9      98035673        rs8190581       G       A       .       PASS    AA=G;DP=143     GT:GQ:DP        1|0:100:33      0|0:100:36      1|0:100:79
+5      148646150       .       G       A       .       PASS    AA=G;DP=148     GT:GQ:DP        1|0:100:33      0|0:100:36      1|0:100:80
+13     45826846        rs4942515       C       T       .       PASS    AA=c;DP=159     GT:GQ:DP        1|0:100:33      0|0:100:37      1|0:100:35
+10     93452404        rs2039973       C       T       .       PASS    AA=C;DP=169     GT:GQ:DP        1|0:100:33      0|0:100:37      1|0:100:56
+7      129718494       .       T       C       .       PASS    AA=T;DP=158     GT:GQ:DP        1|0:100:33      0|0:100:38      1|0:100:84
+18     2181514 .       C       T       .       PASS    AA=c;DP=158     GT:GQ:DP        1|0:100:33      0|0:100:42      1|0:100:79
+2      45345429        .       T       C       .       PASS    AA=T;DP=151     GT:GQ:DP        1|0:100:33      0|0:100:42      1|0:100:80
+12     85442960        rs12580111      A       G       .       PASS    AA=A;DP=152     GT:GQ:DP        1|0:100:33      0|0:100:43      1|0:100:77
+9      93974860        .       G       A       .       PASS    AA=G;DP=122     GT:GQ:DP        1|0:100:33      0|0:10:12       1|0:100:76
+4      130483834       rs10031400      T       G       .       PASS    AA=G;DP=101     GT:GQ:DP        1|0:100:33      0|0:21:17       1|0:100:53
+14     105792977       rs12890858      C       T       .       PASS    AA=t;DP=147     GT:GQ:DP        1|0:100:33      0|0:23:7        1|0:100:55
+3      134119307       .       G       T       .       PASS    AA=G;DP=83      GT:GQ:DP        1|0:100:33      0|0:29:9        1|0:100:41
+13     102167781       rs9557927       G       A       .       PASS    AA=G;DP=125     GT:GQ:DP        1|0:100:33      0|0:31:15       1|0:100:77
+20     8759640 rs11905228      T       C       .       PASS    AA=t;DP=119     GT:GQ:DP        1|0:100:33      0|0:31:17       1|0:100:69
+2      128773894       rs34427153      G       A       .       PASS    AA=G;DP=102     GT:GQ:DP        1|0:100:33      0|0:35:11       1|0:100:47
+17     72815913        .       A       G       .       PASS    AA=N;DP=126     GT:GQ:DP        1|0:100:33      0|0:35:12       1|0:100:80
+19     45172341        rs11542840      C       T       .       PASS    AA=C;DP=106     GT:GQ:DP        1|0:100:33      0|0:35:17       1|0:100:45
+11     24488126        .       G       T       .       PASS    AA=G;DP=116     GT:GQ:DP        1|0:100:33      0|0:35:22       1|0:100:62
+10     13595919        rs59478619      A       G       .       PASS    AA=A;DP=98      GT:GQ:DP        1|0:100:33      0|0:38:12       1|0:100:43
+9      138715764       rs7862174       C       A       .       PASS    AA=c;DP=106     GT:GQ:DP        1|0:100:33      0|0:38:12       1|0:100:62
+7      137705201       .       T       A       .       PASS    AA=T;DP=108     GT:GQ:DP        1|0:100:33      0|0:38:13       1|0:100:62
+13     29871226        .       C       T       .       PASS    AA=C;DP=116     GT:GQ:DP        1|0:100:33      0|0:38:15       1|0:100:69
+13     83094600        .       T       G       .       PASS    AA=t;DP=121     GT:GQ:DP        1|0:100:33      0|0:39:19       1|0:100:70
+17     8639375 rs9912266       A       C       .       PASS    AA=A;DP=132     GT:GQ:DP        1|0:100:33      0|0:39:19       1|0:100:83
+2      237436646       rs57670786      C       A       .       PASS    AA=C;DP=122     GT:GQ:DP        1|0:100:33      0|0:41:13       1|0:100:76
+2      239964841       .       G       A       .       PASS    AA=G;DP=120     GT:GQ:DP        1|0:100:33      0|0:41:13       1|0:100:76
+6      56011732        rs11965332      C       T       .       PASS    AA=C;DP=111     GT:GQ:DP        1|0:100:33      0|0:41:14       1|0:100:63
+10     44742892        .       A       C       .       PASS    AA=a;DP=121     GT:GQ:DP        1|0:100:33      0|0:41:14       1|0:100:74
+8      5811843 rs13248581      G       A       .       PASS    AA=G;DP=119     GT:GQ:DP        1|0:100:33      0|0:41:16       1|0:100:59
+11     45662279        rs11038616      C       G       .       PASS    AA=C;DP=126     GT:GQ:DP        1|0:100:33      0|0:43:25       1|0:100:68
+16     83071183        rs59988001      G       A       .       PASS    AA=G;DP=131     GT:GQ:DP        1|0:100:33      0|0:43:25       1|0:100:73
+2      46583428        rs55871716      G       A       .       PASS    AA=G;DP=106     GT:GQ:DP        1|0:100:33      0|0:44:14       1|0:100:58
+7      71570731        rs7810695       C       T       .       PASS    AA=C;DP=126     GT:GQ:DP        1|0:100:33      0|0:44:14       1|0:100:80
+12     97082413        rs10860300      G       T       .       PASS    AA=T;DP=133     GT:GQ:DP        1|0:100:33      0|0:44:14       1|0:100:85
+6      166842803       rs3799670       T       C       .       PASS    AA=T;DP=145     GT:GQ:DP        1|0:100:33      0|0:44:14       1|0:100:99
+13     31119914        .       C       T       .       PASS    AA=C;DP=107     GT:GQ:DP        1|0:100:33      0|0:44:15       1|0:100:61
+6      32811255        .       C       T       .       PASS    AA=t;DP=116     GT:GQ:DP        1|0:100:33      0|0:44:16       1|0:100:71
+7      53292016        rs58768614      C       T       .       PASS    AA=C;DP=138     GT:GQ:DP        1|0:100:33      0|0:44:21       1|0:100:81
+5      168393333       rs7706730       C       T       .       PASS    AA=T;DP=117     GT:GQ:DP        1|0:100:33      0|0:45:24       1|0:100:58
+5      96577604        .       A       G       .       PASS    AA=A;DP=115     GT:GQ:DP        1|0:100:33      0|0:46:26       1|0:100:55
+3      171537158       .       A       G       .       PASS    AA=A;DP=93      GT:GQ:DP        1|0:100:33      0|0:47:15       1|0:100:33
+15     55509026        rs11071317      G       A       .       PASS    AA=A;DP=133     GT:GQ:DP        1|0:100:33      0|0:47:15       1|0:100:45
+5      174258038       rs10055436      G       A       .       PASS    AA=G;DP=96      GT:GQ:DP        1|0:100:33      0|0:47:15       1|0:100:48
+15     76346898        rs12909123      A       G       .       PASS    AA=A;DP=128     GT:GQ:DP        1|0:100:33      0|0:47:15       1|0:100:82
+4      175884066       .       G       A       .       PASS    AA=G;DP=129     GT:GQ:DP        1|0:100:33      0|0:47:15       1|0:100:82
+1      84566507        .       C       A       .       PASS    AA=C;DP=111     GT:GQ:DP        1|0:100:33      0|0:47:16       1|0:100:63
+2      35505757        rs4594421       C       G       .       PASS    AA=C;DP=116     GT:GQ:DP        1|0:100:33      0|0:47:17       1|0:100:67
+8      11820168        rs13264994      G       A       .       PASS    AA=A;DP=131     GT:GQ:DP        1|0:100:33      0|0:47:17       1|0:100:85
+18     38476046        rs714296        C       T       .       PASS    AA=C;DP=128     GT:GQ:DP        1|0:100:33      0|0:47:18       1|0:100:80
+9      77967198        .       G       A       .       PASS    AA=G;DP=104     GT:GQ:DP        1|0:100:33      0|0:47:21       1|0:100:37
+4      186981121       rs1027523       C       T       .       PASS    AA=C;DP=127     GT:GQ:DP        1|0:100:33      0|0:47:23       1|0:100:68
+3      64113443        rs7611159       C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        1|0:100:33      0|0:48:21       1|0:100:67
+1      161321869       .       T       C       .       PASS    AA=T;DP=164     GT:GQ:DP        1|0:100:33      0|0:49:27       1|0:100:58
+16     83110156        rs4782995       G       A       .       PASS    AA=G;DP=110     GT:GQ:DP        1|0:100:33      0|0:4:13        1|0:100:63
+13     62947858        .       T       C       .       PASS    AA=T;DP=103     GT:GQ:DP        1|0:100:33      0|0:50:16       1|0:100:55
+12     110676024       rs2074055       G       A       .       PASS    AA=G;DP=130     GT:GQ:DP        1|0:100:33      0|0:50:16       1|0:100:82
+5      146108956       rs10076854      C       T       .       PASS    AA=C;DP=148     GT:GQ:DP        1|0:100:33      0|0:52:28       1|0:100:33
+6      89821028        .       G       A       .       PASS    AA=G;DP=127     GT:GQ:DP        1|0:100:33      0|0:53:17       1|0:100:37
+2      128316855       .       G       A       .       PASS    AA=G;DP=101     GT:GQ:DP        1|0:100:33      0|0:53:17       1|0:100:59
+6      24713548        rs4712831       C       T       .       PASS    AA=C;DP=113     GT:GQ:DP        1|0:100:33      0|0:53:17       1|0:100:61
+5      6897151 .       C       T       .       PASS    AA=c;DP=116     GT:GQ:DP        1|0:100:33      0|0:53:17       1|0:100:65
+17     43253391        .       G       A       .       PASS    AA=G;DP=125     GT:GQ:DP        1|0:100:33      0|0:53:17       1|0:100:77
+12     56433780        rs36227551      T       A       .       PASS    AA=T;DP=132     GT:GQ:DP        1|0:100:33      0|0:53:17       1|0:100:83
+19     58146182        .       G       A       .       PASS    AA=g;DP=119     GT:GQ:DP        1|0:100:33      0|0:53:18       1|0:100:67
+16     24129710        .       T       C       .       PASS    AA=T;DP=134     GT:GQ:DP        1|0:100:33      0|0:53:18       1|0:100:83
+12     129110140       .       T       A       .       PASS    AA=A;DP=114     GT:GQ:DP        1|0:100:33      0|0:53:19       1|0:100:61
+8      19397880        rs13280711      T       A       .       PASS    AA=t;DP=109     GT:GQ:DP        1|0:100:33      0|0:53:24       1|0:100:54
+10     131208643       .       A       G       .       PASS    AA=A;DP=162     GT:GQ:DP        1|0:100:33      0|0:54:23       1|0:100:62
+1      209764278       rs12065451      A       G       .       PASS    AA=A;DP=120;HM2 GT:GQ:DP        1|0:100:33      0|0:55:24       1|0:100:62
+3      106911842       rs2301043       C       A       .       PASS    AA=C;DP=121     GT:GQ:DP        1|0:100:33      0|0:55:29       1|0:100:59
+7      39094670        .       A       C       .       PASS    AA=A;DP=132     GT:GQ:DP        1|0:100:33      0|0:55:29       1|0:100:71
+5      154651441       .       A       C       .       PASS    AA=C;DP=143     GT:GQ:DP        1|0:100:33      0|0:55:29       1|0:100:79
+9      137234615       .       C       T       .       PASS    AA=C;DP=119     GT:GQ:DP        1|0:100:33      0|0:56:18       1|0:100:62
+6      14634670        rs7772034       C       T       .       PASS    AA=T;DP=126     GT:GQ:DP        1|0:100:33      0|0:56:18       1|0:100:70
+1      19908236        rs12759415      C       G       .       PASS    AA=C;DP=126;HM2;HM3     GT:GQ:DP        1|0:100:33      0|0:56:18       1|0:100:78
+1      2296012 rs12031614      C       T       .       PASS    AA=T;DP=156;HM2 GT:GQ:DP        1|0:100:33      0|0:56:19       1|0:100:52
+5      84888035        rs1366592       G       A       .       PASS    AA=G;DP=106     GT:GQ:DP        1|0:100:33      0|0:56:19       1|0:100:52
+16     7395679 rs12597457      T       C       .       PASS    AA=C;DP=120     GT:GQ:DP        1|0:100:33      0|0:56:19       1|0:100:54
+5      125251395       .       C       G       .       PASS    AA=C;DP=130     GT:GQ:DP        1|0:100:33      0|0:56:19       1|0:100:72
+10     71168126        rs59644291      G       A       .       PASS    AA=G;DP=107     GT:GQ:DP        1|0:100:33      0|0:56:20       1|0:100:52
+16     80464038        .       A       T       .       PASS    AA=A;DP=112     GT:GQ:DP        1|0:100:33      0|0:57:20       1|0:100:52
+1      86745837        rs28761469      G       A       .       PASS    AA=G;DP=138     GT:GQ:DP        1|0:100:33      0|0:57:30       1|0:100:64
+12     63338126        rs61583185      G       A       .       PASS    AA=G;DP=147     GT:GQ:DP        1|0:100:33      0|0:59:19       1|0:100:56
+7      52790310        .       G       A       .       PASS    AA=G;DP=115     GT:GQ:DP        1|0:100:33      0|0:59:19       1|0:100:63
+19     21853998        rs2435029       T       C       .       PASS    AA=t;DP=134     GT:GQ:DP        1|0:100:33      0|0:59:19       1|0:100:82
+14     77859549        rs8019680       C       A       .       PASS    AA=N;DP=118     GT:GQ:DP        1|0:100:33      0|0:59:20       1|0:100:63
+2      134145422       rs10193374      G       A       .       PASS    AA=G;DP=127     GT:GQ:DP        1|0:100:33      0|0:59:20       1|0:100:70
+11     113180763       .       C       G       .       PASS    AA=C;DP=135     GT:GQ:DP        1|0:100:33      0|0:59:21       1|0:100:41
+16     80418191        .       C       T       .       PASS    AA=C;DP=131     GT:GQ:DP        1|0:100:33      0|0:59:21       1|0:100:77
+1      109138509       rs6675862       T       A       .       PASS    AA=T;DP=130;HM2 GT:GQ:DP        1|0:100:33      0|0:59:24       1|0:100:72
+10     52774051        rs211084        G       A       .       PASS    AA=g;DP=136     GT:GQ:DP        1|0:100:33      0|0:60:26       1|0:100:76
+3      194868344       rs60732955      C       A       .       PASS    AA=C;DP=156     GT:GQ:DP        1|0:100:33      0|0:60:31       1|0:100:50
+3      154698547       rs34165206      G       C       .       PASS    AA=G;DP=125     GT:GQ:DP        1|0:100:33      0|0:61:23       1|0:100:68
+19     49531866        .       G       A       .       PASS    AA=G;DP=122     GT:GQ:DP        1|0:100:33      0|0:61:28       1|0:100:63
+16     51514802        rs2041795       T       C       .       PASS    AA=t;DP=91      GT:GQ:DP        1|0:100:33      0|0:62:20       1|0:100:36
+7      40536239        rs6964399       C       T       .       PASS    AA=C;DP=140     GT:GQ:DP        1|0:100:33      0|0:62:20       1|0:100:46
+19     44230566        rs583995        G       A       .       PASS    AA=G;DP=141     GT:GQ:DP        1|0:100:33      0|0:62:20       1|0:100:89
+4      40637272        .       T       C       .       PASS    AA=T;DP=144     GT:GQ:DP        1|0:100:33      0|0:62:20       1|0:100:90
+9      136302937       rs10748521      G       A       .       PASS    AA=-;DP=146     GT:GQ:DP        1|0:100:33      0|0:62:20       1|0:100:90
+16     26159939        .       A       G       .       PASS    AA=A;DP=149     GT:GQ:DP        1|0:100:33      0|0:62:20       1|0:100:95
+10     23129245        rs16922713      T       C       .       PASS    AA=t;DP=143     GT:GQ:DP        1|0:100:33      0|0:62:21       1|0:100:87
+7      71279778        rs6965847       C       A       .       PASS    AA=C;DP=132     GT:GQ:DP        1|0:100:33      0|0:63:32       1|0:100:68
+13     67199438        rs58889079      G       A       .       PASS    AA=g;DP=133     GT:GQ:DP        1|0:100:33      0|0:65:21       1|0:100:40
+3      47123939        .       G       A       .       PASS    AA=G;DP=96      GT:GQ:DP        1|0:100:33      0|0:65:21       1|0:100:48
+1      37631751        .       G       A       .       PASS    AA=G;DP=116     GT:GQ:DP        1|0:100:33      0|0:65:21       1|0:100:60
+18     367075  rs9949148       G       A       .       PASS    AA=G;DP=117     GT:GQ:DP        1|0:100:33      0|0:65:21       1|0:100:65
+18     48436773        .       C       T       .       PASS    AA=C;DP=119     GT:GQ:DP        1|0:100:33      0|0:65:21       1|0:100:68
+2      127310820       rs13415703      C       A       .       PASS    AA=C;DP=123     GT:GQ:DP        1|0:100:33      0|0:65:21       1|0:100:71
+8      106783696       .       G       T       .       PASS    AA=G;DP=132     GT:GQ:DP        1|0:100:33      0|0:65:21       1|0:100:76
+6      154211954       rs6902468       C       G       .       PASS    AA=G;DP=137     GT:GQ:DP        1|0:100:33      0|0:65:21       1|0:100:82
+22     17420775        rs8138035       A       G       .       PASS    AA=a;DP=138     GT:GQ:DP        1|0:100:33      0|0:65:21       1|0:100:84
+4      5618464 .       C       T       .       PASS    AA=C;DP=142     GT:GQ:DP        1|0:100:33      0|0:65:21       1|0:100:91
+12     3308980 rs11614338      C       T       .       PASS    AA=C;DP=155     GT:GQ:DP        1|0:100:33      0|0:65:22       1|0:100:100
+14     31873078        .       A       G       .       PASS    AA=A;DP=120     GT:GQ:DP        1|0:100:33      0|0:65:22       1|0:100:64
+11     31753492        rs60926911      C       T       .       PASS    AA=C;DP=119     GT:GQ:DP        1|0:100:33      0|0:65:23       1|0:100:65
+14     57508407        .       G       A       .       PASS    AA=G;DP=161     GT:GQ:DP        1|0:100:33      0|0:65:31       1|0:100:56
+10     130250034       .       C       T       .       PASS    AA=C;DP=135     GT:GQ:DP        1|0:100:33      0|0:66:26       1|0:100:69
+5      97468166        .       T       G       .       PASS    AA=T;DP=109     GT:GQ:DP        1|0:100:33      0|0:66:27       1|0:100:48
+5      168299443       rs6862117       G       T       .       PASS    AA=G;DP=107     GT:GQ:DP        1|0:100:33      0|0:68:22       1|0:100:43
+7      52428212        rs12691381      A       T       .       PASS    AA=T;DP=120     GT:GQ:DP        1|0:100:33      0|0:68:22       1|0:100:52
+2      12302266        rs12623335      C       T       .       PASS    AA=C;DP=111     GT:GQ:DP        1|0:100:33      0|0:68:22       1|0:100:58
+1      156875401       .       T       C       .       PASS    AA=T;DP=116     GT:GQ:DP        1|0:100:33      0|0:68:23       1|0:100:59
+7      138145107       .       T       G       .       PASS    AA=T;DP=119     GT:GQ:DP        1|0:100:33      0|0:68:23       1|0:100:62
+11     511085  .       G       T       .       PASS    AA=G;DP=125     GT:GQ:DP        1|0:100:33      0|0:68:23       1|0:100:68
+22     33233200        rs733862        G       T       .       PASS    AA=G;DP=133     GT:GQ:DP        1|0:100:33      0|0:68:23       1|0:100:78
+3      364574  .       G       A       .       PASS    AA=g;DP=135     GT:GQ:DP        1|0:100:33      0|0:68:23       1|0:100:78
+5      36562567        rs2731891       G       T       .       PASS    AA=G;DP=140     GT:GQ:DP        1|0:100:33      0|0:68:23       1|0:100:81
+4      95666282        rs2577056       G       T       .       PASS    AA=G;DP=114     GT:GQ:DP        1|0:100:33      0|0:68:24       1|0:100:55
+8      57382424        .       G       A       .       PASS    AA=G;DP=101     GT:GQ:DP        1|0:100:33      0|0:68:25       1|0:100:42
+20     6800358 rs6085701       A       G       .       PASS    AA=A;DP=147     GT:GQ:DP        1|0:100:33      0|0:68:26       1|0:100:45
+6      57315653        rs62418112      C       T       .       PASS    AA=T;DP=163     GT:GQ:DP        1|0:100:33      0|0:69:33       1|0:100:94
+1      20374948        rs2301479       T       A       .       PASS    AA=T;DP=130;HM3 GT:GQ:DP        1|0:100:33      0|0:71:23       1|0:100:36
+1      179639631       .       G       T       .       PASS    AA=g;DP=121     GT:GQ:DP        1|0:100:33      0|0:71:23       1|0:100:66
+12     81573971        .       G       C       .       PASS    AA=G;DP=128     GT:GQ:DP        1|0:100:33      0|0:71:23       1|0:100:72
+12     37621483        rs12810598      G       A       .       PASS    AA=G;DP=132     GT:GQ:DP        1|0:100:33      0|0:71:23       1|0:100:77
+5      19367730        .       G       A       .       PASS    AA=G;DP=104     GT:GQ:DP        1|0:100:33      0|0:71:24       1|0:100:48
+7      49643417        .       A       G       .       PASS    AA=a;DP=156     GT:GQ:DP        1|0:100:33      0|0:71:24       1|0:100:55
+8      64325475        .       C       T       .       PASS    AA=C;DP=162     GT:GQ:DP        1|0:100:33      0|0:71:24       1|0:100:57
+16     24782461        .       T       C       .       PASS    AA=T;DP=128     GT:GQ:DP        1|0:100:33      0|0:71:24       1|0:100:70
+11     83139025        .       T       C       .       PASS    AA=T;DP=103     GT:GQ:DP        1|0:100:33      0|0:71:25       1|0:100:45
+10     30367741        rs943438        T       C       .       PASS    AA=C;DP=150     GT:GQ:DP        1|0:100:33      0|0:71:25       1|0:100:46
+1      71855831        rs484724        C       T       .       PASS    AA=c;DP=134     GT:GQ:DP        1|0:100:33      0|0:71:25       1|0:100:77
+1      77401321        rs11162279      C       G       .       PASS    AA=C;DP=123     GT:GQ:DP        1|0:100:33      0|0:74:24       1|0:100:60
+4      124058208       rs12648093      A       G       .       PASS    AA=A;DP=124     GT:GQ:DP        1|0:100:33      0|0:74:24       1|0:100:68
+1      80625078        rs12124773      G       A       .       PASS    AA=G;DP=120;HM2 GT:GQ:DP        1|0:100:33      0|0:74:24       1|0:100:70
+2      60205529        rs61374233      C       G       .       PASS    AA=C;DP=147     GT:GQ:DP        1|0:100:33      0|0:74:25       1|0:100:46
+1      100517238       rs4391685       A       G       .       PASS    AA=A;DP=170;HM2 GT:GQ:DP        1|0:100:33      0|0:74:25       1|0:100:61
+18     37215675        rs16974572      T       C       .       PASS    AA=T;DP=130     GT:GQ:DP        1|0:100:33      0|0:74:25       1|0:100:66
+6      159726204       rs7744907       C       T       .       PASS    AA=C;DP=125     GT:GQ:DP        1|0:100:33      0|0:74:25       1|0:100:67
+12     39254480        rs7309652       A       G       .       PASS    AA=A;DP=133     GT:GQ:DP        1|0:100:33      0|0:74:25       1|0:100:77
+2      18215551        .       T       A       .       PASS    AA=A;DP=147     GT:GQ:DP        1|0:100:33      0|0:74:25       1|0:100:86
+5      148755414       rs10051657      T       A       .       PASS    AA=T;DP=131     GT:GQ:DP        1|0:100:33      0|0:74:30       1|0:100:65
+10     112919097       .       G       T       .       PASS    AA=G;DP=118     GT:GQ:DP        1|0:100:33      0|0:74:35       1|0:100:49
+3      10916732        .       T       C       .       PASS    AA=T;DP=123     GT:GQ:DP        1|0:100:33      0|0:77:25       1|0:100:65
+19     50721027        rs56216986      T       C       .       PASS    AA=T;DP=124     GT:GQ:DP        1|0:100:33      0|0:77:25       1|0:100:67
+3      124386647       rs6771072       A       G       .       PASS    AA=A;DP=139     GT:GQ:DP        1|0:100:33      0|0:77:25       1|0:100:80
+6      138114455       .       C       T       .       PASS    AA=C;DP=139     GT:GQ:DP        1|0:100:33      0|0:77:26       1|0:100:39
+1      3910529 .       C       T       .       PASS    AA=C;DP=123     GT:GQ:DP        1|0:100:33      0|0:77:26       1|0:100:64
+22     37723106        .       A       G       .       PASS    AA=A;DP=137     GT:GQ:DP        1|0:100:33      0|0:77:26       1|0:100:78
+6      117500433       .       T       A       .       PASS    AA=T;DP=158     GT:GQ:DP        1|0:100:33      0|0:77:27       1|0:100:52
+18     70307655        .       G       C       .       PASS    AA=G;DP=157     GT:GQ:DP        1|0:100:33      0|0:77:27       1|0:100:60
+13     24139601        rs7328102       T       C       .       PASS    AA=T;DP=126     GT:GQ:DP        1|0:100:33      0|0:77:27       1|0:100:65
+9      131373126       .       C       T       .       PASS    AA=c;DP=133     GT:GQ:DP        1|0:100:33      0|0:77:27       1|0:100:74
+12     9299250 rs16918265      T       G       .       PASS    AA=t;DP=159     GT:GQ:DP        1|0:100:33      0|0:80:26       1|0:100:49
+8      90325645        .       G       A       .       PASS    AA=G;DP=119     GT:GQ:DP        1|0:100:33      0|0:80:26       1|0:100:58
+11     110059856       .       T       C       .       PASS    AA=T;DP=123     GT:GQ:DP        1|0:100:33      0|0:80:26       1|0:100:62
+11     23146568        rs16910741      A       T       .       PASS    AA=T;DP=121     GT:GQ:DP        1|0:100:33      0|0:80:26       1|0:100:62
+12     10203229        rs10505755      T       G       .       PASS    AA=t;DP=125     GT:GQ:DP        1|0:100:33      0|0:80:26       1|0:100:67
+1      56507739        rs11206766      A       G       .       PASS    AA=A;DP=129;HM2 GT:GQ:DP        1|0:100:33      0|0:80:26       1|0:100:69
+3      152439929       rs7632738       G       A       .       PASS    AA=G;DP=127     GT:GQ:DP        1|0:100:33      0|0:80:26       1|0:100:69
+11     4686088 rs1389464       C       T       .       PASS    AA=t;DP=135     GT:GQ:DP        1|0:100:33      0|0:80:26       1|0:100:78
+4      102541555       .       C       T       .       PASS    AA=C;DP=138     GT:GQ:DP        1|0:100:33      0|0:80:26       1|0:100:78
+7      11089408        .       C       G       .       PASS    AA=C;DP=139     GT:GQ:DP        1|0:100:33      0|0:80:26       1|0:100:78
+2      106693367       rs11124130      C       G       .       PASS    AA=.;DP=139     GT:GQ:DP        1|0:100:33      0|0:80:26       1|0:100:80
+4      52911605        .       T       G       .       PASS    AA=T;DP=143     GT:GQ:DP        1|0:100:33      0|0:80:26       1|0:100:87
+4      70357975        rs10020086      T       C       .       PASS    AA=T;DP=122     GT:GQ:DP        1|0:100:33      0|0:80:27       1|0:100:62
+5      116768821       rs2624460       C       G       .       PASS    AA=C;DP=134     GT:GQ:DP        1|0:100:33      0|0:80:27       1|0:100:72
+5      5757234 rs11948250      G       A       .       PASS    AA=G;DP=137     GT:GQ:DP        1|0:100:33      0|0:80:27       1|0:100:77
+16     56265557        rs935748        C       G       .       PASS    AA=N;DP=144     GT:GQ:DP        1|0:100:33      0|0:80:27       1|0:100:80
+13     97799128        rs16955394      A       C       .       PASS    AA=C;DP=143     GT:GQ:DP        1|0:100:33      0|0:80:27       1|0:100:82
+2      137488415       rs16837856      G       A       .       PASS    AA=G;DP=141     GT:GQ:DP        1|0:100:33      0|0:80:27       1|0:100:82
+8      1193732 .       T       C       .       PASS    AA=N;DP=118     GT:GQ:DP        1|0:100:33      0|0:80:27       1|0:19:59
+18     39780699        rs4516302       A       G       .       PASS    AA=A;DP=149     GT:GQ:DP        1|0:100:33      0|0:82:34       1|0:100:80
+10     124114281       .       T       C       .       PASS    AA=T;DP=161     GT:GQ:DP        1|0:100:33      0|0:83:27       1|0:100:57
+7      12702205        rs11976341      G       C       .       PASS    AA=G;DP=127     GT:GQ:DP        1|0:100:33      0|0:83:27       1|0:100:69
+9      19144985        rs10125812      T       C       .       PASS    AA=T;DP=136     GT:GQ:DP        1|0:100:33      0|0:83:27       1|0:100:76
+1      102451399       rs4495727       A       T       .       PASS    AA=A;DP=140     GT:GQ:DP        1|0:100:33      0|0:83:27       1|0:100:78
+10     82595696        rs2344720       T       C       .       PASS    AA=C;DP=125     GT:GQ:DP        1|0:100:33      0|0:83:28       1|0:100:67
+14     87701059        .       C       G       .       PASS    AA=C;DP=141     GT:GQ:DP        1|0:100:33      0|0:83:28       1|0:100:80
+17     45422952        rs12452477      T       C       .       PASS    AA=T;DP=154     GT:GQ:DP        1|0:100:33      0|0:83:28       1|0:100:92
+5      32605684        rs1993537       G       A       .       PASS    AA=G;DP=112     GT:GQ:DP        1|0:100:33      0|0:83:29       1|0:100:50
+6      35194372        rs41270050      C       A       .       PASS    AA=A;DP=150     GT:GQ:DP        1|0:100:33      0|0:84:36       1|0:100:79
+4      11244501        .       T       C       .       PASS    AA=T;DP=130     GT:GQ:DP        1|0:100:33      0|0:85:33       1|0:100:64
+7      130908743       rs1643275       A       G       .       PASS    AA=G;DP=131     GT:GQ:DP        1|0:100:33      0|0:86:28       1|0:100:71
+2      126574388       rs28488291      C       G       .       PASS    AA=c;DP=136     GT:GQ:DP        1|0:100:33      0|0:86:28       1|0:100:77
+4      130548161       .       T       C       .       PASS    AA=C;DP=138     GT:GQ:DP        1|0:100:33      0|0:86:29       1|0:100:35
+5      64236065        .       C       T       .       PASS    AA=T;DP=139     GT:GQ:DP        1|0:100:33      0|0:86:29       1|0:100:77
+9      9320061 rs34153720      T       C       .       PASS    AA=T;DP=149     GT:GQ:DP        1|0:100:33      0|0:86:29       1|0:100:85
+1      69438544        rs1572421       G       A       .       PASS    AA=A;DP=153;HM2;HM3     GT:GQ:DP        1|0:100:33      0|0:86:32       1|0:100:42
+12     76638790        rs953832        A       G       .       PASS    AA=A;DP=158     GT:GQ:DP        1|0:100:33      0|0:89:29       1|0:100:53
+18     49144276        rs57469493      T       A       .       PASS    AA=T;DP=167     GT:GQ:DP        1|0:100:33      0|0:89:29       1|0:100:55
+10     121212024       rs4751720       A       G       .       PASS    AA=a;DP=118     GT:GQ:DP        1|0:100:33      0|0:89:29       1|0:100:56
+10     12117871        rs11814933      T       C       .       PASS    AA=T;DP=136     GT:GQ:DP        1|0:100:33      0|0:89:29       1|0:100:70
+7      27412087        .       T       C       .       PASS    AA=T;DP=156     GT:GQ:DP        1|0:100:33      0|0:89:32       1|0:100:52
+21     25061292        rs2040261       A       G       .       PASS    AA=A;DP=121     GT:GQ:DP        1|0:100:33      0|0:92:30       1|0:100:58
+3      114738505       rs6805231       G       T       .       PASS    AA=G;DP=131     GT:GQ:DP        1|0:100:33      0|0:92:30       1|0:100:68
+12     126877305       .       C       T       .       PASS    AA=C;DP=129     GT:GQ:DP        1|0:100:33      0|0:92:31       1|0:100:65
+7      112449257       .       A       G       .       PASS    AA=A;DP=130     GT:GQ:DP        1|0:100:33      0|0:92:31       1|0:100:65
+1      90594830        rs11801483      G       A       .       PASS    AA=A;DP=143     GT:GQ:DP        1|0:100:33      0|0:92:31       1|0:100:79
+6      10546881        rs303053        G       A       .       PASS    AA=G;DP=134     GT:GQ:DP        1|0:100:33      0|0:95:31       1|0:100:69
+14     98079698        rs17595317      A       G       .       PASS    AA=A;DP=135     GT:GQ:DP        1|0:100:33      0|0:95:31       1|0:100:73
+1      175108853       rs16850282      C       T       .       PASS    AA=C;DP=140;HM2 GT:GQ:DP        1|0:100:33      0|0:95:32       1|0:100:75
+1      34991043        rs7555751       G       T       .       PASS    AA=G;DP=149     GT:GQ:DP        1|0:100:33      0|0:98:32       1|0:100:44
+2      48727482        rs10432667      A       G       .       PASS    AA=A;DP=130     GT:GQ:DP        1|0:100:33      0|0:98:32       1|0:100:63
+1      58720000        rs11207238      G       A       .       PASS    AA=g;DP=138     GT:GQ:DP        1|0:100:33      0|0:98:33       1|0:100:72
+7      137634756       .       T       C       .       PASS    AA=T;DP=141     GT:GQ:DP        1|0:100:33      0|0:98:35       1|0:100:36
+2      120871822       rs6735848       A       C       .       PASS    AA=A;DP=117     GT:GQ:DP        1|0:100:33      1|0:100:11      1|1:100:74
+11     103471931       rs591118        A       G       .       PASS    AA=A;DP=98      GT:GQ:DP        1|0:100:33      1|0:100:13      1|1:100:51
+2      219540812       rs59017262      T       C       .       PASS    AA=T;DP=108     GT:GQ:DP        1|0:100:33      1|0:100:14      1|1:100:63
+3      184687855       rs11926372      T       G       .       PASS    AA=T;DP=110     GT:GQ:DP        1|0:100:33      1|0:100:15      1|1:100:62
+15     69476113        rs11632070      C       T       .       PASS    AA=C;DP=113     GT:GQ:DP        1|0:100:33      1|0:100:15      1|1:100:66
+19     38504055        rs12327740      T       G       .       PASS    AA=G;DP=105     GT:GQ:DP        1|0:100:33      1|0:100:18      1|1:100:53
+4      182324657       rs10000368      A       G       .       PASS    AA=A;DP=104     GT:GQ:DP        1|0:100:33      1|0:100:19      1|1:100:54
+2      125757176       rs17012374      A       G       .       PASS    AA=A;DP=114     GT:GQ:DP        1|0:100:33      1|0:100:19      1|1:100:59
+20     53284599        rs13043387      G       T       .       PASS    AA=G;DP=103     GT:GQ:DP        1|0:100:33      1|0:100:20      1|1:100:50
+10     32511817        rs12247464      G       C       .       PASS    AA=G;DP=123     GT:GQ:DP        1|0:100:33      1|0:100:20      1|1:100:72
+16     79803812        rs8058156       A       G       .       PASS    AA=G;DP=126     GT:GQ:DP        1|0:100:33      1|0:100:20      1|1:100:73
+21     45057499        rs9306115       A       G       .       PASS    AA=A;DP=140     GT:GQ:DP        1|0:100:33      1|0:100:21      1|1:100:44
+14     95152446        rs7146461       C       T       .       PASS    AA=C;DP=112     GT:GQ:DP        1|0:100:33      1|0:100:21      1|1:100:56
+13     100256692       rs1041016       G       A       .       PASS    AA=G;DP=114     GT:GQ:DP        1|0:100:33      1|0:100:21      1|1:100:59
+1      191727993       rs12728485      G       A       .       PASS    AA=G;DP=116     GT:GQ:DP        1|0:100:33      1|0:100:21      1|1:100:61
+8      19097492        rs1948930       G       A       .       PASS    AA=G;DP=124     GT:GQ:DP        1|0:100:33      1|0:100:22      1|1:100:68
+15     77151181        rs55979970      A       G       .       PASS    AA=A;DP=106     GT:GQ:DP        1|0:100:33      1|0:100:23      1|1:100:40
+14     85985178        rs12887268      G       T       .       PASS    AA=T;DP=105     GT:GQ:DP        1|0:100:33      1|0:100:23      1|1:100:51
+8      73563929        rs12544663      T       C       .       PASS    AA=T;DP=120     GT:GQ:DP        1|0:100:33      1|0:100:23      1|1:100:64
+11     12356494        .       A       G       .       PASS    AA=A;DP=145     GT:GQ:DP        1|0:100:33      1|0:100:23      1|1:100:88
+19     40130759        .       C       T       .       PASS    AA=C;DP=113     GT:GQ:DP        1|0:100:33      1|0:100:23      1|1:92:58
+1      181592419       rs502870        T       G       .       PASS    AA=G;DP=117;HM2;HM3     GT:GQ:DP        1|0:100:33      1|0:100:25      1|1:100:61
+14     89302552        rs17778640      C       A       .       PASS    AA=C;DP=121     GT:GQ:DP        1|0:100:33      1|0:100:25      1|1:100:64
+1      179298778       rs4652554       C       T       .       PASS    AA=T;DP=121;HM2;HM3     GT:GQ:DP        1|0:100:33      1|0:100:25      1|1:100:65
+13     92767474        rs7321055       T       C       .       PASS    AA=T;DP=151     GT:GQ:DP        1|0:100:33      1|0:100:25      1|1:100:65
+5      2029500 rs1123390       A       G       .       PASS    AA=A;DP=126     GT:GQ:DP        1|0:100:33      1|0:100:25      1|1:100:67
+17     53255319        rs2440009       A       T       .       PASS    AA=T;DP=127     GT:GQ:DP        1|0:100:33      1|0:100:25      1|1:100:68
+14     49478871        rs10149041      T       G       .       PASS    AA=G;DP=135     GT:GQ:DP        1|0:100:33      1|0:100:25      1|1:100:74
+7      47585806        rs4720599       T       C       .       PASS    AA=T;DP=133     GT:GQ:DP        1|0:100:33      1|0:100:25      1|1:100:77
+2      129750796       rs7567687       C       T       .       PASS    AA=C;DP=137     GT:GQ:DP        1|0:100:33      1|0:100:25      1|1:100:78
+3      61019673        rs17064394      A       C       .       PASS    AA=C;DP=137     GT:GQ:DP        1|0:100:33      1|0:100:25      1|1:100:79
+11     37674230        rs1223948       G       A       .       PASS    AA=G;DP=139     GT:GQ:DP        1|0:100:33      1|0:100:25      1|1:100:81
+11     78126769        rs1790551       A       G       .       PASS    AA=G;DP=129     GT:GQ:DP        1|0:100:33      1|0:100:27      1|1:100:55
+3      71621953        rs55853340      A       G       .       PASS    AA=A;DP=127     GT:GQ:DP        1|0:100:33      1|0:100:27      1|1:100:69
+5      37623462        rs11957813      A       G       .       PASS    AA=A;DP=108     GT:GQ:DP        1|0:100:33      1|0:100:28      1|1:100:40
+10     71115458        rs3847344       T       C       .       PASS    AA=T;DP=122     GT:GQ:DP        1|0:100:33      1|0:100:30      1|1:100:59
+4      56788732        rs6829440       G       C       .       PASS    AA=C;DP=154     GT:GQ:DP        1|0:100:33      1|0:100:30      1|1:100:88
+19     63533992        rs16988667      A       G       .       PASS    AA=G;DP=155     GT:GQ:DP        1|0:100:33      1|0:100:30      1|1:100:91
+11     7555946 rs6578881       T       C       .       PASS    AA=T;DP=128     GT:GQ:DP        1|0:100:33      1|0:100:31      1|1:100:66
+15     77455966        .       C       T       .       PASS    AA=C;DP=137     GT:GQ:DP        1|0:100:33      1|0:100:31      1|1:100:73
+11     93321693        rs7940973       C       G       .       PASS    AA=G;DP=124     GT:GQ:DP        1|0:100:33      1|0:100:33      1|1:100:46
+9      108479348       rs10119403      C       A       .       PASS    AA=C;DP=123     GT:GQ:DP        1|0:100:33      1|0:100:33      1|1:100:59
+12     45219969        rs9669050       G       C       .       PASS    AA=C;DP=129     GT:GQ:DP        1|0:100:33      1|0:100:34      1|1:100:61
+3      194307059       rs61547327      A       G       .       PASS    AA=G;DP=137     GT:GQ:DP        1|0:100:33      1|0:100:35      1|1:100:72
+1      9663548 rs57561254      G       A       .       PASS    AA=G;DP=126     GT:GQ:DP        1|0:100:33      1|0:26:24       1|1:100:61
+9      137539061       rs7045559       A       C       .       PASS    AA=C;DP=134     GT:GQ:DP        1|0:100:33      1|0:33:23       1|1:100:79
+15     27119335        rs17748759      T       C       .       PASS    AA=C;DP=113     GT:GQ:DP        1|0:100:33      1|0:46:21       1|1:100:59
+2      79710023        rs13003154      T       A       .       PASS    AA=T;DP=89      GT:GQ:DP        1|0:100:33      1|0:47:20       1|1:81:28
+16     10539446        rs1504883       G       A       .       PASS    AA=G;DP=112     GT:GQ:DP        1|0:100:33      1|0:51:21       1|1:100:57
+20     41849271        rs6031108       G       A       .       PASS    AA=G;DP=126     GT:GQ:DP        1|0:100:33      1|0:53:24       1|1:100:68
+1      41622001        .       G       A       .       PASS    AA=a;DP=128     GT:GQ:DP        1|0:100:33      1|0:68:19       1|1:100:76
+2      197391803       rs16858525      C       T       .       PASS    AA=C;DP=129     GT:GQ:DP        1|0:100:33      1|0:69:21       1|1:100:73
+14     51872161        .       G       A       .       PASS    AA=G;DP=98      GT:GQ:DP        1|0:100:33      1|0:70:11       1|1:100:48
+1      84981349        .       A       G       .       PASS    AA=a;DP=122     GT:GQ:DP        1|0:100:33      1|0:70:26       1|1:100:65
+7      81160015        .       G       C       .       PASS    AA=G;DP=138     GT:GQ:DP        1|0:100:33      1|0:80:23       1|1:100:86
+X      2635922 rs5982839       G       A       .       PASS    AA=.;DP=90      GT:GQ:DP        1|0:100:33      1|0:88:13       1|1:90:31
+8      69041755        rs56771541      G       A       .       PASS    AA=A;DP=102     GT:GQ:DP        1|0:100:33      1|0:95:17       1|1:100:52
+7      89014512        rs28393201      G       T       .       PASS    AA=G;DP=108     GT:GQ:DP        1|0:100:33      1|0:96:24       1|1:100:38
+5      142010399       rs13353912      C       T       .       PASS    AA=T;DP=107     GT:GQ:DP        1|0:100:33      1|0:99:23       1|1:100:50
+5      150612869       rs2277028       A       G       .       PASS    AA=A;DP=91      GT:GQ:DP        1|0:100:33      1|1:10:10       1|1:100:48
+16     74129590        rs55722812      G       A       .       PASS    AA=G;DP=107     GT:GQ:DP        1|0:100:33      1|1:16:23       1|1:58:40
+8      81616263        rs388922        A       C       .       PASS    AA=A;DP=104     GT:GQ:DP        1|0:100:33      1|1:24:19       1|1:100:52
+22     45338094        rs1534895       T       C       .       PASS    AA=C;DP=94      GT:GQ:DP        1|0:100:33      1|1:24:8        1|1:100:56
+17     14219630        rs8065835       T       C       .       PASS    AA=C;DP=93      GT:GQ:DP        1|0:100:33      1|1:25:17       1|1:100:46
+3      88409615        rs10433529      A       T       .       PASS    AA=A;DP=126     GT:GQ:DP        1|0:100:33      1|1:30:20       1|1:100:74
+12     6893384 rs710415        A       G       .       PASS    AA=G;DP=134     GT:GQ:DP        1|0:100:33      1|1:33:11       1|1:100:47
+4      7105300 rs4689583       A       G       .       PASS    AA=A;DP=117     GT:GQ:DP        1|0:100:33      1|1:33:11       1|1:100:71
+10     43623225        rs7922745       T       C       .       PASS    AA=C;DP=103     GT:GQ:DP        1|0:100:33      1|1:42:15       1|1:100:54
+1      17484202        rs2977304       T       C       .       PASS    AA=T;DP=111;HM2 GT:GQ:DP        1|0:100:33      1|1:42:15       1|1:100:60
+11     122798298       rs520811        A       G       .       PASS    AA=a;DP=151     GT:GQ:DP        1|0:100:33      1|1:45:22       1|1:100:90
+12     127575961       rs7306842       C       T       .       PASS    AA=T;DP=130     GT:GQ:DP        1|0:100:33      1|1:47:27       1|1:100:69
+4      2403224 rs1528068       A       T       .       PASS    AA=A;DP=94      GT:GQ:DP        1|0:100:33      1|1:48:16       1|1:100:36
+1      84626099        rs585935        A       G       .       PASS    AA=a;DP=101     GT:GQ:DP        1|0:100:33      1|1:48:16       1|1:100:41
+12     12511439        rs4763287       T       C       .       PASS    AA=C;DP=106     GT:GQ:DP        1|0:100:33      1|1:48:16       1|1:100:45
+13     32386949        rs9315193       T       C       .       PASS    AA=C;DP=139     GT:GQ:DP        1|0:100:33      1|1:49:21       1|1:100:44
+13     101007121       rs9554804       A       G       .       PASS    AA=A;DP=108     GT:GQ:DP        1|0:100:33      1|1:51:17       1|1:100:59
+8      124259346       rs13260318      C       G       .       PASS    AA=G;DP=122     GT:GQ:DP        1|0:100:33      1|1:51:18       1|1:100:57
+18     3590186 rs548849        A       G       .       PASS    AA=G;DP=126     GT:GQ:DP        1|0:100:33      1|1:51:18       1|1:100:77
+7      93290876        rs28754318      T       C       .       PASS    AA=C;DP=116     GT:GQ:DP        1|0:100:33      1|1:52:26       1|1:100:56
+7      142225632       rs28521678      T       C       .       PASS    AA=C;DP=115     GT:GQ:DP        1|0:100:33      1|1:53:23       1|1:100:58
+16     12388774        rs7190594       G       C       .       PASS    AA=G;DP=133     GT:GQ:DP        1|0:100:33      1|1:54:18       1|1:100:84
+2      35705977        rs10865109      C       T       .       PASS    AA=T;DP=107     GT:GQ:DP        1|0:100:33      1|1:54:25       1|1:100:48
+11     362457  rs7480716       A       G       .       PASS    AA=N;DP=105     GT:GQ:DP        1|0:100:33      1|1:57:19       1|1:100:42
+17     7820093 rs34212807      C       T       .       PASS    AA=T;DP=110     GT:GQ:DP        1|0:100:33      1|1:57:20       1|1:100:55
+16     79990571        rs12924670      T       C       .       PASS    AA=T;DP=128     GT:GQ:DP        1|0:100:33      1|1:57:26       1|1:100:69
+2      215177086       rs4352229       C       G       .       PASS    AA=G;DP=141     GT:GQ:DP        1|0:100:33      1|1:60:21       1|1:100:88
+12     89843401        rs4427619       A       G       .       PASS    AA=G;DP=119     GT:GQ:DP        1|0:100:33      1|1:61:26       1|1:100:62
+20     49429884        rs2092793       C       T       .       PASS    AA=C;DP=138     GT:GQ:DP        1|0:100:33      1|1:61:30       1|1:100:74
+14     86804785        rs1756664       A       G       .       PASS    AA=G;DP=147     GT:GQ:DP        1|0:100:33      1|1:63:21       1|1:100:50
+4      54417997        rs11930266      A       G       .       PASS    AA=G;DP=152     GT:GQ:DP        1|0:100:33      1|1:64:27       1|1:100:92
+6      112257123       rs61397446      A       G       .       PASS    AA=A;DP=113     GT:GQ:DP        1|0:100:33      1|1:66:22       1|1:100:59
+2      218041443       rs1478584       G       A       .       PASS    AA=G;DP=119     GT:GQ:DP        1|0:100:33      1|1:66:22       1|1:100:64
+5      36320883        rs1363845       G       A       .       PASS    AA=G;DP=118     GT:GQ:DP        1|0:100:33      1|1:66:23       1|1:100:60
+1      227356655       rs9287023       G       C       .       PASS    AA=G;DP=118     GT:GQ:DP        1|0:100:33      1|1:66:24       1|1:100:63
+7      135098185       rs6942575       A       G       .       PASS    AA=A;DP=102     GT:GQ:DP        1|0:100:33      1|1:69:23       1|1:100:40
+5      134955439       rs34805597      T       C       .       PASS    AA=C;DP=135     GT:GQ:DP        1|0:100:33      1|1:69:23       1|1:100:71
+12     14180834        rs7966469       C       T       .       PASS    AA=T;DP=117     GT:GQ:DP        1|0:100:33      1|1:69:24       1|1:100:61
+1      119783010       rs11580104      A       T       .       PASS    AA=A;DP=126;HM2 GT:GQ:DP        1|0:100:33      1|1:69:24       1|1:100:69
+14     65437440        rs12432431      C       T       .       PASS    AA=T;DP=132     GT:GQ:DP        1|0:100:33      1|1:69:24       1|1:100:74
+1      46924413        rs3766224       T       C       .       PASS    AA=t;DP=114;HM2 GT:GQ:DP        1|0:100:33      1|1:72:24       1|1:100:57
+15     31585388        rs7169155       A       G       .       PASS    AA=A;DP=116     GT:GQ:DP        1|0:100:33      1|1:72:26       1|1:100:57
+5      39696803        rs13184032      T       C       .       PASS    AA=C;DP=119     GT:GQ:DP        1|0:100:33      1|1:72:26       1|1:100:60
+17     14500655        rs12602267      A       G       .       PASS    AA=A;DP=106     GT:GQ:DP        1|0:100:33      1|1:75:25       1|1:100:50
+11     24596418        rs2136480       A       G       .       PASS    AA=A;DP=149     GT:GQ:DP        1|0:100:33      1|1:75:25       1|1:100:51
+15     69424295        rs8030394       C       T       .       PASS    AA=C;DP=124     GT:GQ:DP        1|0:100:33      1|1:75:26       1|1:100:68
+14     51111979        rs7151351       G       A       .       PASS    AA=A;DP=128     GT:GQ:DP        1|0:100:33      1|1:78:27       1|1:100:71
+13     76316442        rs9544385       T       C       .       PASS    AA=C;DP=142     GT:GQ:DP        1|0:100:33      1|1:78:29       1|1:100:84
+3      60771675        rs2736737       T       C       .       PASS    AA=t;DP=128     GT:GQ:DP        1|0:100:33      1|1:81:27       1|1:100:67
+10     101246397       rs10883354      C       A       .       PASS    AA=C;DP=115     GT:GQ:DP        1|0:100:33      1|1:81:29       1|1:100:53
+12     66833460        rs2193050       T       G       .       PASS    AA=G;DP=144     GT:GQ:DP        1|0:100:33      1|1:84:29       1|1:100:71
+3      192060229       rs9855583       A       G       .       PASS    AA=a;DP=125     GT:GQ:DP        1|0:100:33      1|1:87:32       1|1:100:59
+17     65706641        rs1514238       C       T       .       PASS    AA=C;DP=162     GT:GQ:DP        1|0:100:33      1|1:96:34       1|1:100:93
+3      68871053        rs1504301       G       T       .       PASS    AA=G;DP=129     GT:GQ:DP        1|0:100:34      0|0:100:33      1|0:100:63
+4      22772382        .       C       T       .       PASS    AA=c;DP=138     GT:GQ:DP        1|0:100:34      0|0:100:33      1|0:100:73
+17     67819383        .       C       T       .       PASS    AA=C;DP=151     GT:GQ:DP        1|0:100:34      0|0:100:35      1|0:100:83
+1      229797966       rs1655304       G       C       .       PASS    AA=G;DP=131;HM2 GT:GQ:DP        1|0:100:34      0|0:100:36      1|0:100:61
+17     54416770        .       A       C       .       PASS    AA=A;DP=158     GT:GQ:DP        1|0:100:34      0|0:100:36      1|0:100:86
+9      134653499       .       C       T       .       PASS    AA=C;DP=174     GT:GQ:DP        1|0:100:34      0|0:100:37      1|0:100:45
+11     111953400       rs10789898      T       C       .       PASS    AA=C;DP=152     GT:GQ:DP        1|0:100:34      0|0:100:40      1|0:100:75
+2      147496593       rs10166529      C       G       .       PASS    AA=c;DP=98      GT:GQ:DP        1|0:100:34      0|0:13:14       1|0:100:50
+9      138768542       rs1108607       T       C       .       PASS    AA=N;DP=116     GT:GQ:DP        1|0:100:34      0|0:22:14       1|0:100:70
+10     133827847       rs9419213       G       A       .       PASS    AA=g;DP=102     GT:GQ:DP        1|0:100:34      0|0:23:10       1|0:100:49
+4      107640233       .       G       A       .       PASS    AA=T;DP=130     GT:GQ:DP        1|0:100:34      0|0:24:21       1|0:100:78
+8      28532938        rs59804838      C       T       .       PASS    AA=C;DP=91      GT:GQ:DP        1|0:100:34      0|0:25:13       1|0:100:31
+1      76848592        rs12354033      G       A       .       PASS    AA=G;DP=114;HM2;HM3     GT:GQ:DP        1|0:100:34      0|0:25:13       1|0:100:69
+21     40169358        rs56729072      C       T       .       PASS    AA=C;DP=144     GT:GQ:DP        1|0:100:34      0|0:26:19       1|0:100:46
+3      127354757       rs56195618      C       T       .       PASS    AA=C;DP=130     GT:GQ:DP        1|0:100:34      0|0:30:14       1|0:100:85
+7      107655416       rs60503554      T       C       .       PASS    AA=T;DP=124     GT:GQ:DP        1|0:100:34      0|0:30:21       1|0:100:60
+11     132009714       rs11824078      T       G       .       PASS    AA=T;DP=121     GT:GQ:DP        1|0:100:34      0|0:31:19       1|0:100:55
+20     14624801        .       G       T       .       PASS    AA=G;DP=117     GT:GQ:DP        1|0:100:34      0|0:32:21       1|0:100:65
+4      159125702       rs62335306      G       A       .       PASS    AA=A;DP=132     GT:GQ:DP        1|0:100:34      0|0:33:18       1|0:100:80
+19     39176829        .       T       G       .       PASS    AA=g;DP=125     GT:GQ:DP        1|0:100:34      0|0:36:18       1|0:100:74
+16     66520915        .       A       G       .       PASS    AA=A;DP=122     GT:GQ:DP        1|0:100:34      0|0:36:22       1|0:100:66
+4      870558  rs7657611       G       C       .       PASS    AA=G;DP=112     GT:GQ:DP        1|0:100:34      0|0:39:18       1|0:100:56
+15     36605984        rs4924272       G       C       .       PASS    AA=G;DP=119     GT:GQ:DP        1|0:100:34      0|0:40:18       1|0:100:67
+2      224047820       .       A       T       .       PASS    AA=A;DP=121     GT:GQ:DP        1|0:100:34      0|0:40:18       1|0:100:70
+3      147127632       rs12639425      T       C       .       PASS    AA=T;DP=122     GT:GQ:DP        1|0:100:34      0|0:40:19       1|0:100:68
+17     17127482        .       G       A       .       PASS    AA=G;DP=145     GT:GQ:DP        1|0:100:34      0|0:40:24       1|0:100:88
+22     39289680        .       C       T       .       PASS    AA=C;DP=140     GT:GQ:DP        1|0:100:34      0|0:40:28       1|0:100:72
+20     280884  rs57816274      A       G       .       PASS    AA=a;DP=121     GT:GQ:DP        1|0:100:34      0|0:41:13       1|0:100:74
+6      44407968        .       T       A       .       PASS    AA=T;DP=132     GT:GQ:DP        1|0:100:34      0|0:41:14       1|0:100:38
+10     101279988       rs10883368      A       G       .       PASS    AA=G;DP=116     GT:GQ:DP        1|0:100:34      0|0:41:14       1|0:100:59
+1      97157566        .       A       T       .       PASS    AA=A;DP=130     GT:GQ:DP        1|0:100:34      0|0:44:14       1|0:100:41
+19     16315728        .       A       G       .       PASS    AA=A;DP=116     GT:GQ:DP        1|0:100:34      0|0:44:14       1|0:100:68
+9      138444501       rs4451431       C       T       .       PASS    AA=c;DP=121     GT:GQ:DP        1|0:100:34      0|0:44:14       1|0:100:74
+13     94257936        rs7985906       C       T       .       PASS    AA=C;DP=124     GT:GQ:DP        1|0:100:34      0|0:44:15       1|0:100:75
+10     29798352        rs16930246      C       A       .       PASS    AA=C;DP=133     GT:GQ:DP        1|0:100:34      0|0:44:15       1|0:100:83
+3      9777596 .       C       G       .       PASS    AA=C;DP=156     GT:GQ:DP        1|0:100:34      0|0:46:21       1|0:100:53
+4      180196304       rs1545713       C       T       .       PASS    AA=C;DP=114     GT:GQ:DP        1|0:100:34      0|0:46:26       1|0:100:54
+3      4721621 rs9862943       A       T       .       PASS    AA=T;DP=128     GT:GQ:DP        1|0:100:34      0|0:46:26       1|0:100:71
+14     38948603        .       T       C       .       PASS    AA=T;DP=100     GT:GQ:DP        1|0:100:34      0|0:47:15       1|0:100:48
+22     45660230        rs59800507      G       A       .       PASS    AA=G;DP=115     GT:GQ:DP        1|0:100:34      0|0:47:15       1|0:100:69
+7      37066437        rs12534639      C       A       .       PASS    AA=C;DP=122     GT:GQ:DP        1|0:100:34      0|0:47:15       1|0:100:69
+14     74489264        rs57349486      G       A       .       PASS    AA=G;DP=124     GT:GQ:DP        1|0:100:34      0|0:47:15       1|0:100:76
+2      85826195        rs56085927      G       A       .       PASS    AA=G;DP=125     GT:GQ:DP        1|0:100:34      0|0:47:15       1|0:100:80
+10     22795945        .       G       A       .       PASS    AA=G;DP=105     GT:GQ:DP        1|0:100:34      0|0:47:16       1|0:100:56
+8      2440780 rs7008581       C       T       .       PASS    AA=t;DP=118     GT:GQ:DP        1|0:100:34      0|0:47:16       1|0:100:70
+6      108975135       .       C       T       .       PASS    AA=C;DP=134     GT:GQ:DP        1|0:100:34      0|0:47:16       1|0:100:83
+20     41713027        .       C       T       .       PASS    AA=C;DP=123     GT:GQ:DP        1|0:100:34      0|0:47:17       1|0:100:74
+15     43299854        rs12915804      T       C       .       PASS    AA=T;DP=135     GT:GQ:DP        1|0:100:34      0|0:47:17       1|0:100:87
+17     28527386        .       A       G       .       PASS    AA=A;DP=125     GT:GQ:DP        1|0:100:34      0|0:47:18       1|0:100:73
+5      133940328       rs61436069      C       G       .       PASS    AA=C;DP=149     GT:GQ:DP        1|0:100:34      0|0:47:23       1|0:100:93
+11     13231856        rs4429039       A       G       .       PASS    AA=A;DP=122     GT:GQ:DP        1|0:100:34      0|0:48:19       1|0:100:68
+8      57066875        rs1912818       T       G       .       PASS    AA=G;DP=129     GT:GQ:DP        1|0:100:34      0|0:48:21       1|0:100:74
+2      113509744       rs35724334      G       T       .       PASS    AA=N;DP=129     GT:GQ:DP        1|0:100:34      0|0:49:27       1|0:100:71
+3      2725845 .       A       G       .       PASS    AA=A;DP=97      GT:GQ:DP        1|0:100:34      0|0:50:16       1|0:100:33
+15     81355592        rs62011731      G       A       .       PASS    AA=G;DP=116     GT:GQ:DP        1|0:100:34      0|0:50:16       1|0:100:65
+3      133630291       .       C       T       .       PASS    AA=C;DP=122     GT:GQ:DP        1|0:100:34      0|0:50:16       1|0:100:73
+2      103656029       .       A       T       .       PASS    AA=A;DP=123     GT:GQ:DP        1|0:100:34      0|0:50:16       1|0:100:75
+1      10254037        rs41258245      T       G       .       PASS    AA=T;DP=109     GT:GQ:DP        1|0:100:34      0|0:50:17       1|0:100:58
+20     42456997        .       C       G       .       PASS    AA=C;DP=122     GT:GQ:DP        1|0:100:34      0|0:50:17       1|0:100:70
+4      5986933 rs4422365       G       A       .       PASS    AA=A;DP=151     GT:GQ:DP        1|0:100:34      0|0:50:19       1|0:100:48
+2      117024165       rs6542328       A       C       .       PASS    AA=C;DP=136     GT:GQ:DP        1|0:100:34      0|0:51:27       1|0:100:73
+8      83891661        rs1608806       T       C       .       PASS    AA=T;DP=139     GT:GQ:DP        1|0:100:34      0|0:52:23       1|0:100:84
+20     42092796        rs8120602       G       C       .       PASS    AA=C;DP=139     GT:GQ:DP        1|0:100:34      0|0:52:28       1|0:100:73
+9      124007731       rs10985564      T       C       .       PASS    AA=T;DP=161     GT:GQ:DP        1|0:100:34      0|0:53:17       1|0:100:66
+8      125871647       rs10103527      T       C       .       PASS    AA=T;DP=118     GT:GQ:DP        1|0:100:34      0|0:53:17       1|0:100:67
+18     6983401 rs616396        A       G       .       PASS    AA=A;DP=121     GT:GQ:DP        1|0:100:34      0|0:53:17       1|0:100:68
+11     73377443        rs681826        C       T       .       PASS    AA=C;DP=121     GT:GQ:DP        1|0:100:34      0|0:53:17       1|0:100:70
+21     42331775        rs4920059       C       T       .       PASS    AA=C;DP=128     GT:GQ:DP        1|0:100:34      0|0:53:17       1|0:100:79
+10     110508588       rs7893638       G       A       .       PASS    AA=A;DP=119     GT:GQ:DP        1|0:100:34      0|0:53:18       1|0:100:68
+5      177482442       .       G       C       .       PASS    AA=G;DP=113     GT:GQ:DP        1|0:100:34      0|0:53:19       1|0:100:55
+15     68239956        rs12324909      G       T       .       PASS    AA=G;DP=127     GT:GQ:DP        1|0:100:34      0|0:53:19       1|0:100:74
+11     130901175       .       G       C       .       PASS    AA=C;DP=128     GT:GQ:DP        1|0:100:34      0|0:53:20       1|0:100:79
+9      125748685       .       T       C       .       PASS    AA=T;DP=149     GT:GQ:DP        1|0:100:34      0|0:54:23       1|0:100:47
+6      145809505       rs4294023       C       T       .       PASS    AA=C;DP=144     GT:GQ:DP        1|0:100:34      0|0:54:23       1|0:100:79
+14     94131146        .       G       A       .       PASS    AA=G;DP=161     GT:GQ:DP        1|0:100:34      0|0:54:25       1|0:100:57
+9      411424  rs7042600       C       G       .       PASS    AA=C;DP=136     GT:GQ:DP        1|0:100:34      0|0:55:25       1|0:100:78
+17     39414118        .       G       A       .       PASS    AA=G;DP=127     GT:GQ:DP        1|0:100:34      0|0:55:32       1|0:100:62
+15     72264269        rs351238        G       A       .       PASS    AA=G;DP=95      GT:GQ:DP        1|0:100:34      0|0:56:18       1|0:100:38
+15     40527661        rs3742996       C       T       .       PASS    AA=C;DP=135     GT:GQ:DP        1|0:100:34      0|0:56:18       1|0:100:65
+12     54316359        rs2550671       T       G       .       PASS    AA=T;DP=119     GT:GQ:DP        1|0:100:34      0|0:56:18       1|0:100:67
+16     6636077 rs1861036       A       T       .       PASS    AA=A;DP=111     GT:GQ:DP        1|0:100:34      0|0:56:19       1|0:100:59
+12     81686169        rs7315215       T       A       .       PASS    AA=T;DP=133     GT:GQ:DP        1|0:100:34      0|0:56:21       1|0:100:74
+10     116347494       .       T       C       .       PASS    AA=T;DP=123     GT:GQ:DP        1|0:100:34      0|0:57:24       1|0:100:67
+22     29448290        rs11913730      A       G       .       PASS    AA=A;DP=102     GT:GQ:DP        1|0:100:34      0|0:59:19       1|0:100:37
+8      90831632        .       C       G       .       PASS    AA=C;DP=113     GT:GQ:DP        1|0:100:34      0|0:59:19       1|0:100:59
+11     38140628        rs61877394      T       A       .       PASS    AA=T;DP=117     GT:GQ:DP        1|0:100:34      0|0:59:19       1|0:100:63
+6      51785564        .       C       T       .       PASS    AA=C;DP=131     GT:GQ:DP        1|0:100:34      0|0:59:19       1|0:100:74
+5      71644598        .       T       C       .       PASS    AA=T;DP=128     GT:GQ:DP        1|0:100:34      0|0:59:19       1|0:100:76
+8      104323072       .       A       G       .       PASS    AA=A;DP=136     GT:GQ:DP        1|0:100:34      0|0:59:20       1|0:100:83
+18     19856943        .       G       A       .       PASS    AA=G;DP=146     GT:GQ:DP        1|0:100:34      0|0:59:20       1|0:100:96
+11     14215231        rs4757244       G       A       .       PASS    AA=G;DP=139     GT:GQ:DP        1|0:100:34      0|0:59:26       1|0:100:79
+7      128934721       rs11771549      T       G       .       PASS    AA=G;DP=152     GT:GQ:DP        1|0:100:34      0|0:60:26       1|0:100:46
+11     113844612       .       G       T       .       PASS    AA=G;DP=135     GT:GQ:DP        1|0:100:34      0|0:61:26       1|0:100:76
+6      115261299       rs9387257       T       G       .       PASS    AA=T;DP=109     GT:GQ:DP        1|0:100:34      0|0:62:20       1|0:100:46
+17     8387274 .       T       G       .       PASS    AA=T;DP=108     GT:GQ:DP        1|0:100:34      0|0:62:20       1|0:100:57
+16     84299531        rs11860727      G       A       .       PASS    AA=G;DP=113     GT:GQ:DP        1|0:100:34      0|0:62:20       1|0:100:58
+4      53827748        .       G       T       .       PASS    AA=G;DP=114     GT:GQ:DP        1|0:100:34      0|0:62:20       1|0:100:58
+6      2478160 .       T       C       .       PASS    AA=T;DP=119     GT:GQ:DP        1|0:100:34      0|0:62:20       1|0:100:64
+20     1881141 .       G       C       .       PASS    AA=G;DP=122     GT:GQ:DP        1|0:100:34      0|0:62:20       1|0:100:68
+14     30860312        .       G       A       .       PASS    AA=G;DP=123     GT:GQ:DP        1|0:100:34      0|0:62:20       1|0:100:69
+12     42927735        .       G       A       .       PASS    AA=G;DP=130     GT:GQ:DP        1|0:100:34      0|0:62:20       1|0:100:76
+16     46829887        rs16946014      C       T       .       PASS    AA=C;DP=131     GT:GQ:DP        1|0:100:34      0|0:62:20       1|0:100:79
+4      189998095       .       C       T       .       PASS    AA=C;DP=114     GT:GQ:DP        1|0:100:34      0|0:62:21       1|0:100:59
+9      129332968       .       G       T       .       PASS    AA=G;DP=127     GT:GQ:DP        1|0:100:34      0|0:62:21       1|0:100:73
+12     1788919 .       C       T       .       PASS    AA=C;DP=133     GT:GQ:DP        1|0:100:34      0|0:62:21       1|0:100:81
+5      168043724       rs60384220      C       G       .       PASS    AA=C;DP=145     GT:GQ:DP        1|0:100:34      0|0:62:21       1|0:100:88
+6      40422750        rs7775171       T       A       .       PASS    AA=-;DP=137     GT:GQ:DP        1|0:100:34      0|0:62:22       1|0:100:85
+1      169285198       .       C       T       .       PASS    AA=C;DP=154     GT:GQ:DP        1|0:100:34      0|0:62:26       1|0:100:55
+6      23496727        .       C       G       .       PASS    AA=C;DP=134     GT:GQ:DP        1|0:100:34      0|0:62:27       1|0:100:69
+9      71749387        rs10868299      C       A       .       PASS    AA=c;DP=130     GT:GQ:DP        1|0:100:34      0|0:63:32       1|0:100:65
+14     92001392        .       C       T       .       PASS    AA=C;DP=142     GT:GQ:DP        1|0:100:34      0|0:64:23       1|0:100:85
+21     32763354        .       G       A       .       PASS    AA=G;DP=152     GT:GQ:DP        1|0:100:34      0|0:65:21       1|0:100:49
+12     80429636        rs11114895      A       G       .       PASS    AA=A;DP=106     GT:GQ:DP        1|0:100:34      0|0:65:22       1|0:100:48
+11     1678383 .       C       G       .       PASS    AA=.;DP=126     GT:GQ:DP        1|0:100:34      0|0:65:22       1|0:100:69
+20     25399180        rs449370        C       T       .       PASS    AA=T;DP=129     GT:GQ:DP        1|0:100:34      0|0:65:22       1|0:100:72
+5      179654071       .       C       T       .       PASS    AA=C;DP=118     GT:GQ:DP        1|0:100:34      0|0:65:24       1|0:100:47
+18     54355971        rs3809970       C       T       .       PASS    AA=C;DP=153     GT:GQ:DP        1|0:100:34      0|0:65:24       1|0:100:95
+3      24264859        rs4632485       G       C       .       PASS    AA=G;DP=110     GT:GQ:DP        1|0:100:34      0|0:67:26       1|0:100:50
+11     82630144        rs623313        C       T       .       PASS    AA=C;DP=122     GT:GQ:DP        1|0:100:34      0|0:68:22       1|0:100:68
+1      171502978       rs844660        A       G       .       PASS    AA=a;DP=122;HM2 GT:GQ:DP        1|0:100:34      0|0:68:22       1|0:100:69
+7      69234899        rs12698855      A       G       .       PASS    AA=G;DP=130     GT:GQ:DP        1|0:100:34      0|0:68:22       1|0:100:73
+20     3146442 rs6051650       A       T       .       PASS    AA=A;DP=134     GT:GQ:DP        1|0:100:34      0|0:68:22       1|0:100:77
+8      4045801 rs6990955       T       C       .       PASS    AA=-;DP=107     GT:GQ:DP        1|0:100:34      0|0:68:23       1|0:100:50
+3      14217454        .       A       G       .       PASS    AA=A;DP=114     GT:GQ:DP        1|0:100:34      0|0:68:23       1|0:100:57
+4      40937326        .       T       C       .       PASS    AA=T;DP=142     GT:GQ:DP        1|0:100:34      0|0:68:23       1|0:100:86
+13     99533512        rs9513725       G       A       .       PASS    AA=g;DP=103     GT:GQ:DP        1|0:100:34      0|0:68:24       1|0:100:41
+10     1287010 rs12241203      G       A       .       PASS    AA=G;DP=111     GT:GQ:DP        1|0:100:34      0|0:68:24       1|0:100:52
+8      56572342        rs16921907      A       G       .       PASS    AA=A;DP=142     GT:GQ:DP        1|0:100:34      0|0:68:25       1|0:100:40
+3      15093609        rs1488096       C       T       .       PASS    AA=C;DP=154     GT:GQ:DP        1|0:100:34      0|0:68:34       1|0:100:85
+11     23331056        rs7115448       A       G       .       PASS    AA=A;DP=130     GT:GQ:DP        1|0:100:34      0|0:69:28       1|0:100:68
+8      134746633       rs11991968      G       A       .       PASS    AA=G;DP=105     GT:GQ:DP        1|0:100:34      0|0:71:23       1|0:100:49
+12     25326482        rs4129617       T       C       .       PASS    AA=C;DP=146     GT:GQ:DP        1|0:100:34      0|0:71:23       1|0:100:50
+19     38182608        rs10412255      C       A       .       PASS    AA=A;DP=137     GT:GQ:DP        1|0:100:34      0|0:71:23       1|0:100:76
+4      8408870 rs60387429      G       A       .       PASS    AA=g;DP=138     GT:GQ:DP        1|0:100:34      0|0:71:23       1|0:100:80
+6      151647571       rs9322311       G       T       .       PASS    AA=C;DP=137     GT:GQ:DP        1|0:100:34      0|0:71:23       1|0:100:82
+1      100880313       rs12409832      A       G       .       PASS    AA=G;DP=148     GT:GQ:DP        1|0:100:34      0|0:71:23       1|0:100:93
+18     18120264        .       T       G       .       PASS    AA=T;DP=147     GT:GQ:DP        1|0:100:34      0|0:71:24       1|0:100:44
+3      57406257        .       C       T       .       PASS    AA=C;DP=132     GT:GQ:DP        1|0:100:34      0|0:71:24       1|0:100:71
+18     53128632        .       A       G       .       PASS    AA=A;DP=122     GT:GQ:DP        1|0:100:34      0|0:71:25       1|0:100:59
+15     64907512        .       G       A       .       PASS    AA=C;DP=133     GT:GQ:DP        1|0:100:34      0|0:71:29       1|0:100:69
+4      79385314        .       A       T       .       PASS    AA=A;DP=150     GT:GQ:DP        1|0:100:34      0|0:73:31       1|0:100:43
+1      211769288       rs320425        T       C       .       PASS    AA=T;DP=104;HM2;HM3     GT:GQ:DP        1|0:100:34      0|0:74:24       1|0:100:48
+10     123349576       rs2454810       T       C       .       PASS    AA=C;DP=113     GT:GQ:DP        1|0:100:34      0|0:74:24       1|0:100:53
+13     87400020        .       C       T       .       PASS    AA=C;DP=124     GT:GQ:DP        1|0:100:34      0|0:74:24       1|0:100:67
+5      148497973       .       A       G       .       PASS    AA=A;DP=133     GT:GQ:DP        1|0:100:34      0|0:74:24       1|0:100:76
+6      3357324 rs17136529      C       T       .       PASS    AA=T;DP=149     GT:GQ:DP        1|0:100:34      0|0:74:24       1|0:100:86
+9      107677299       .       G       C       .       PASS    AA=G;DP=126     GT:GQ:DP        1|0:100:34      0|0:74:25       1|0:100:67
+14     96170102        .       C       T       .       PASS    AA=c;DP=128     GT:GQ:DP        1|0:100:34      0|0:74:26       1|0:100:69
+11     46301059        rs61412231      G       C       .       PASS    AA=G;DP=99      GT:GQ:DP        1|0:100:34      0|0:77:25       1|0:100:30
+12     128064156       .       C       A       .       PASS    AA=C;DP=124     GT:GQ:DP        1|0:100:34      0|0:77:25       1|0:100:67
+20     1809664 .       G       A       .       PASS    AA=G;DP=138     GT:GQ:DP        1|0:100:34      0|0:77:25       1|0:100:78
+14     20407700        rs59960344      G       A       .       PASS    AA=G;DP=130     GT:GQ:DP        1|0:100:34      0|0:77:26       1|0:100:32
+8      80520377        .       A       G       .       PASS    AA=A;DP=114     GT:GQ:DP        1|0:100:34      0|0:77:26       1|0:100:38
+12     70415753        rs2117759       A       G       .       PASS    AA=A;DP=121     GT:GQ:DP        1|0:100:34      0|0:77:26       1|0:100:62
+12     52575635        rs12316615      C       T       .       PASS    AA=C;DP=137     GT:GQ:DP        1|0:100:34      0|0:77:27       1|0:100:76
+2      86594604        rs7562493       C       T       .       PASS    AA=C;DP=141     GT:GQ:DP        1|0:100:34      0|0:77:28       1|0:100:80
+2      37900567        rs7563723       T       C       .       PASS    AA=C;DP=125     GT:GQ:DP        1|0:100:34      0|0:80:26       1|0:100:56
+17     40738718        .       T       A       .       PASS    AA=T;DP=125     GT:GQ:DP        1|0:100:34      0|0:80:26       1|0:100:66
+2      27087363        rs13032100      T       C       .       PASS    AA=C;DP=133     GT:GQ:DP        1|0:100:34      0|0:80:26       1|0:100:70
+4      30445063        rs61209816      C       T       .       PASS    AA=C;DP=134     GT:GQ:DP        1|0:100:34      0|0:80:28       1|0:100:67
+6      38561885        .       G       A       .       PASS    AA=G;DP=140     GT:GQ:DP        1|0:100:34      0|0:80:28       1|0:100:82
+4      55204455        .       T       C       .       PASS    AA=T;DP=122     GT:GQ:DP        1|0:100:34      0|0:80:30       1|0:100:61
+2      147928003       .       G       T       .       PASS    AA=G;DP=108     GT:GQ:DP        1|0:100:34      0|0:83:27       1|0:100:47
+10     5516375 rs11595157      C       T       .       PASS    AA=c;DP=136     GT:GQ:DP        1|0:100:34      0|0:83:27       1|0:100:70
+1      67798063        rs4655731       C       T       .       PASS    AA=C;DP=143;HM2;HM3     GT:GQ:DP        1|0:100:34      0|0:83:27       1|0:100:80
+1      81677554        rs10430056      C       T       .       PASS    AA=C;DP=148;HM2;HM3     GT:GQ:DP        1|0:100:34      0|0:83:27       1|0:100:89
+8      42383268        rs10095324      A       G       .       PASS    AA=A;DP=130     GT:GQ:DP        1|0:100:34      0|0:83:28       1|0:100:70
+17     61948969        rs956952        C       A       .       PASS    AA=C;DP=140     GT:GQ:DP        1|0:100:34      0|0:83:28       1|0:100:80
+12     31662812        rs541856        G       A       .       PASS    AA=g;DP=137     GT:GQ:DP        1|0:100:34      0|0:83:29       1|0:100:74
+2      32085103        .       T       C       .       PASS    AA=T;DP=108     GT:GQ:DP        1|0:100:34      0|0:86:28       1|0:100:45
+6      137315615       rs9399200       G       C       .       PASS    AA=G;DP=116     GT:GQ:DP        1|0:100:34      0|0:86:28       1|0:100:56
+10     25285661        rs6482464       T       C       .       PASS    AA=C;DP=128     GT:GQ:DP        1|0:100:34      0|0:86:28       1|0:100:66
+8      125117963       .       A       C       .       PASS    AA=A;DP=141     GT:GQ:DP        1|0:100:34      0|0:86:28       1|0:100:77
+5      145280598       .       T       A       .       PASS    AA=T;DP=149     GT:GQ:DP        1|0:100:34      0|0:86:30       1|0:100:86
+16     31425149        rs6565236       A       T       .       PASS    AA=A;DP=130     GT:GQ:DP        1|0:100:34      0|0:89:29       1|0:100:66
+5      123813899       rs57829020      G       A       .       PASS    AA=G;DP=120     GT:GQ:DP        1|0:100:34      0|0:89:30       1|0:100:55
+11     48249196        .       C       A       .       PASS    AA=C;DP=134     GT:GQ:DP        1|0:100:34      0|0:89:30       1|0:100:64
+10     54304430        .       G       C       .       PASS    AA=G;DP=128     GT:GQ:DP        1|0:100:34      0|0:89:30       1|0:100:65
+2      86455924        rs59209855      C       T       .       PASS    AA=C;DP=134     GT:GQ:DP        1|0:100:34      0|0:89:30       1|0:100:70
+11     103091636       .       T       C       .       PASS    AA=T;DP=139     GT:GQ:DP        1|0:100:34      0|0:89:37       1|0:100:65
+15     86174971        rs11073747      A       G       .       PASS    AA=G;DP=140     GT:GQ:DP        1|0:100:34      0|0:92:30       1|0:100:75
+8      66284445        .       G       A       .       PASS    AA=G;DP=160     GT:GQ:DP        1|0:100:34      0|0:95:31       1|0:100:53
+13     90691996        .       G       A       .       PASS    AA=G;DP=155     GT:GQ:DP        1|0:100:34      0|0:95:31       1|0:100:54
+8      54382095        .       A       G       .       PASS    AA=A;DP=138     GT:GQ:DP        1|0:100:34      0|0:95:31       1|0:100:74
+18     72916869        rs62104279      C       T       .       PASS    AA=C;DP=132     GT:GQ:DP        1|0:100:34      0|0:95:32       1|0:100:65
+2      232514180       .       G       A       .       PASS    AA=G;DP=146     GT:GQ:DP        1|0:100:34      0|0:95:32       1|0:100:82
+8      73513030        .       G       A       .       PASS    AA=G;DP=131     GT:GQ:DP        1|0:100:34      0|0:98:32       1|0:100:67
+11     126492708       rs12364670      C       T       .       PASS    AA=C;DP=138     GT:GQ:DP        1|0:100:34      0|0:98:32       1|0:100:77
+1      30505083        .       T       C       .       PASS    AA=T;DP=158     GT:GQ:DP        1|0:100:34      0|0:98:32       1|0:100:92
+13     113168963       rs7333340       A       G       .       PASS    AA=G;DP=98      GT:GQ:DP        1|0:100:34      1|0:100:15      1|1:100:51
+11     98504087        rs61893378      A       G       .       PASS    AA=a;DP=110     GT:GQ:DP        1|0:100:34      1|0:100:15      1|1:100:59
+8      141090370       rs4352829       G       T       .       PASS    AA=G;DP=110     GT:GQ:DP        1|0:100:34      1|0:100:15      1|1:100:61
+7      69737424        rs17141917      C       T       .       PASS    AA=C;DP=101     GT:GQ:DP        1|0:100:34      1|0:100:17      1|1:99:37
+10     58833151        rs11005789      C       T       .       PASS    AA=C;DP=113     GT:GQ:DP        1|0:100:34      1|0:100:18      1|1:100:61
+11     1404243 .       C       T       .       PASS    AA=C;DP=137     GT:GQ:DP        1|0:100:34      1|0:100:18      1|1:100:81
+4      15142135        rs10755215      C       T       .       PASS    AA=C;DP=140     GT:GQ:DP        1|0:100:34      1|0:100:19      1|1:100:46
+2      88189074        rs2970918       T       C       .       PASS    AA=N;DP=127     GT:GQ:DP        1|0:100:34      1|0:100:21      1|1:100:52
+4      3343297 rs13115912      T       C       .       PASS    AA=C;DP=131     GT:GQ:DP        1|0:100:34      1|0:100:21      1|1:100:77
+2      12233820        rs13382759      T       C       .       PASS    AA=t;DP=107     GT:GQ:DP        1|0:100:34      1|0:100:22      1|1:100:42
+1      169481504       rs7551531       G       A       .       PASS    AA=G;DP=121;HM2;HM3     GT:GQ:DP        1|0:100:34      1|0:100:22      1|1:100:63
+12     127810591       rs12820262      G       A       .       PASS    AA=G;DP=129     GT:GQ:DP        1|0:100:34      1|0:100:22      1|1:100:76
+6      32959485        rs4947259       C       T       .       PASS    AA=T;DP=137     GT:GQ:DP        1|0:100:34      1|0:100:23      1|1:100:78
+6      33180265        rs2064477       G       A       .       PASS    AA=N;DP=146     GT:GQ:DP        1|0:100:34      1|0:100:24      1|1:100:90
+6      152515667       rs2747642       T       C       .       PASS    AA=T;DP=115     GT:GQ:DP        1|0:100:34      1|0:100:25      1|1:100:48
+1      246256529       rs6660095       C       A       .       PASS    AA=c;DP=112;HM2 GT:GQ:DP        1|0:100:34      1|0:100:25      1|1:100:56
+16     11276764        rs425537        T       A       .       PASS    AA=T;DP=153     GT:GQ:DP        1|0:100:34      1|0:100:26      1|1:100:93
+21     38289908        rs1028999       A       C       .       PASS    AA=C;DP=117     GT:GQ:DP        1|0:100:34      1|0:100:26      1|1:90:43
+13     52239546        rs466098        C       T       .       PASS    AA=T;DP=112     GT:GQ:DP        1|0:100:34      1|0:100:27      1|1:100:51
+3      103786612       rs9290728       T       G       .       PASS    AA=G;DP=133     GT:GQ:DP        1|0:100:34      1|0:100:28      1|1:100:71
+5      135733749       rs2546664       T       G       .       PASS    AA=T;DP=111     GT:GQ:DP        1|0:100:34      1|0:100:28      1|1:79:39
+11     4556611 rs61883582      G       T       .       PASS    AA=T;DP=129     GT:GQ:DP        1|0:100:34      1|0:100:29      1|1:100:67
+4      173375406       rs1097439       C       T       .       PASS    AA=T;DP=140     GT:GQ:DP        1|0:100:34      1|0:100:29      1|1:100:72
+12     54360487        rs58665755      C       T       .       PASS    AA=C;DP=113     GT:GQ:DP        1|0:100:34      1|0:100:31      1|1:100:37
+20     19269537        rs6035302       G       C       .       PASS    AA=C;DP=146     GT:GQ:DP        1|0:100:34      1|0:100:31      1|1:100:82
+7      71206559        rs860014        G       A       .       PASS    AA=A;DP=147     GT:GQ:DP        1|0:100:34      1|0:100:31      1|1:100:84
+7      76730294        rs3108434       G       A       .       PASS    AA=A;DP=134     GT:GQ:DP        1|0:100:34      1|0:100:32      1|1:100:68
+4      142013263       rs1487564       G       C       .       PASS    AA=G;DP=142     GT:GQ:DP        1|0:100:34      1|0:100:32      1|1:100:79
+9      91504270        rs10908915      T       C       .       PASS    AA=T;DP=155     GT:GQ:DP        1|0:100:34      1|0:100:32      1|1:100:83
+1      51870168        rs6695853       A       G       .       PASS    AA=N;DP=131;HM2;HM3     GT:GQ:DP        1|0:100:34      1|0:100:33      1|1:100:64
+3      6109655 rs6787992       T       C       .       PASS    AA=T;DP=143     GT:GQ:DP        1|0:100:34      1|0:100:33      1|1:100:76
+11     19794539        rs10833180      A       C       .       PASS    AA=A;DP=123     GT:GQ:DP        1|0:100:34      1|0:100:34      1|1:100:55
+2      86256448        rs2367203       C       T       .       PASS    AA=T;DP=138     GT:GQ:DP        1|0:100:34      1|0:100:34      1|1:100:70
+11     84273490        rs10898314      C       T       .       PASS    AA=C;DP=111     GT:GQ:DP        1|0:100:34      1|0:44:19       1|1:100:44
+15     63005523        rs11857242      G       C       .       PASS    AA=G;DP=154     GT:GQ:DP        1|0:100:34      1|0:61:24       1|1:100:98
+13     33630061        rs2027230       G       A       .       PASS    AA=A;DP=131     GT:GQ:DP        1|0:100:34      1|0:65:22       1|1:100:75
+14     77764235        rs11628567      A       G       .       PASS    AA=G;DP=120     GT:GQ:DP        1|0:100:34      1|0:70:17       1|1:100:69
+1      42092238        .       T       C       .       PASS    AA=T;DP=126     GT:GQ:DP        1|0:100:34      1|0:71:20       1|1:100:74
+13     98996718        rs6491511       C       A       .       PASS    AA=A;DP=132     GT:GQ:DP        1|0:100:34      1|0:76:20       1|1:100:78
+3      151082472       rs9864069       C       T       .       PASS    AA=C;DP=92      GT:GQ:DP        1|0:100:34      1|0:77:18       1|1:100:40
+11     131927645       rs61906368      G       A       .       PASS    AA=G;DP=130     GT:GQ:DP        1|0:100:34      1|0:80:18       1|1:100:75
+12     116097823       rs10850790      C       G       .       PASS    AA=G;DP=107     GT:GQ:DP        1|0:100:34      1|0:86:21       1|1:83:53
+2      121161244       rs1979166       A       G       .       PASS    AA=G;DP=160     GT:GQ:DP        1|0:100:34      1|0:88:26       1|1:100:41
+2      115333024       rs13020576      G       A       .       PASS    AA=G;DP=127     GT:GQ:DP        1|0:100:34      1|0:89:23       1|1:100:71
+11     12116617        rs1110007       G       T       .       PASS    AA=g;DP=132     GT:GQ:DP        1|0:100:34      1|0:90:20       1|1:100:76
+8      107477762       rs12678851      C       T       .       PASS    AA=T;DP=118     GT:GQ:DP        1|0:100:34      1|0:91:19       1|1:100:65
+15     77203164        rs8033061       G       A       .       PASS    AA=G;DP=153     GT:GQ:DP        1|0:100:34      1|0:92:17       1|1:100:102
+4      75560104        rs2609204       T       C       .       PASS    AA=C;DP=122     GT:GQ:DP        1|0:100:34      1|0:93:24       1|1:100:63
+1      47863952        rs6668415       C       T       .       PASS    AA=T;DP=115     GT:GQ:DP        1|0:100:34      1|0:96:20       1|1:53:59
+12     117571529       rs12322897      G       A       .       PASS    AA=G;DP=133     GT:GQ:DP        1|0:100:34      1|0:96:28       1|1:100:72
+2      240948055       rs10170314      G       T       .       PASS    AA=G;DP=118     GT:GQ:DP        1|0:100:34      1|0:99:10       1|1:100:75
+6      24080505        .       C       G       .       PASS    AA=C;DP=119     GT:GQ:DP        1|0:100:34      1|1:15:11       1|1:100:76
+9      35594128        rs2297877       C       G       .       PASS    AA=C;DP=113     GT:GQ:DP        1|0:100:34      1|1:21:12       1|1:100:52
+5      158558925       rs2163775       C       A       .       PASS    AA=C;DP=107     GT:GQ:DP        1|0:100:34      1|1:22:18       1|1:100:54
+13     71619158        rs9542860       C       T       .       PASS    AA=T;DP=122     GT:GQ:DP        1|0:100:34      1|1:24:19       1|1:100:69
+6      43489594        rs831304        A       G       .       PASS    AA=G;DP=114     GT:GQ:DP        1|0:100:34      1|1:26:14       1|1:100:59
+21     39251132        rs2836783       T       G       .       PASS    AA=T;DP=131     GT:GQ:DP        1|0:100:34      1|1:30:21       1|1:100:78
+2      2815859 rs823235        A       C       .       PASS    AA=C;DP=136     GT:GQ:DP        1|0:100:34      1|1:30:25       1|1:100:77
+4      13363462        rs12649040      A       G       .       PASS    AA=G;DP=106     GT:GQ:DP        1|0:100:34      1|1:33:13       1|1:100:60
+18     49456552        rs1595000       A       G       .       PASS    AA=G;DP=120     GT:GQ:DP        1|0:100:34      1|1:33:19       1|1:100:69
+9      105902883       rs7027739       A       G       .       PASS    AA=A;DP=113     GT:GQ:DP        1|0:100:34      1|1:36:23       1|1:100:56
+12     70053362        rs7134124       C       T       .       PASS    AA=C;DP=122     GT:GQ:DP        1|0:100:34      1|1:36:23       1|1:100:67
+19     43094939        rs8105305       T       C       .       PASS    AA=C;DP=131     GT:GQ:DP        1|0:100:34      1|1:38:20       1|1:74:37
+10     100445675       rs10748750      A       G       .       PASS    AA=a;DP=149     GT:GQ:DP        1|0:100:34      1|1:39:13       1|1:100:59
+13     23602911        rs9553196       C       T       .       PASS    AA=T;DP=122     GT:GQ:DP        1|0:100:34      1|1:41:29       1|1:100:59
+7      3419834 rs1112281       A       G       .       PASS    AA=G;DP=91      GT:GQ:DP        1|0:100:34      1|1:42:14       1|1:100:44
+21     31087729        rs2833090       C       T       .       PASS    AA=C;DP=109     GT:GQ:DP        1|0:100:34      1|1:42:14       1|1:100:57
+7      63524952        rs6460152       C       A       .       PASS    AA=A;DP=104     GT:GQ:DP        1|0:100:34      1|1:42:14       1|1:100:58
+1      95482527        rs2296308       T       G       .       PASS    AA=G;DP=129;HM2;HM3     GT:GQ:DP        1|0:100:34      1|1:44:26       1|1:100:68
+7      154665797       rs7799962       A       G       .       PASS    AA=G;DP=114     GT:GQ:DP        1|0:100:34      1|1:45:17       1|1:100:64
+1      25057067        rs4382656       C       T       .       PASS    AA=C;DP=109     GT:GQ:DP        1|0:100:34      1|1:46:22       1|1:100:43
+6      113737469       rs2842840       C       G       .       PASS    AA=-;DP=117     GT:GQ:DP        1|0:100:34      1|1:50:22       1|1:100:61
+22     44010100        rs4823453       T       C       .       PASS    AA=C;DP=110     GT:GQ:DP        1|0:100:34      1|1:51:17       1|1:100:59
+16     19716110        rs34836825      G       A       .       PASS    AA=A;DP=124     GT:GQ:DP        1|0:100:34      1|1:51:18       1|1:100:71
+11     45017861        rs61881902      C       T       .       PASS    AA=T;DP=137     GT:GQ:DP        1|0:100:34      1|1:52:23       1|1:100:77
+2      78970386        rs13395260      C       T       .       PASS    AA=C;DP=127     GT:GQ:DP        1|0:100:34      1|1:53:29       1|1:100:65
+12     3245489 rs57253687      C       T       .       PASS    AA=T;DP=97      GT:GQ:DP        1|0:100:34      1|1:54:18       1|1:100:42
+13     26872081        rs1218809       T       C       .       PASS    AA=N;DP=99      GT:GQ:DP        1|0:100:34      1|1:54:18       1|1:100:47
+12     3160988 rs11062553      T       C       .       PASS    AA=T;DP=127     GT:GQ:DP        1|0:100:34      1|1:54:20       1|1:100:72
+8      82025924        rs10957993      T       C       .       PASS    AA=C;DP=122     GT:GQ:DP        1|0:100:34      1|1:57:19       1|1:100:70
+1      34065522        rs7527126       G       A       .       PASS    AA=g;DP=121;HM2 GT:GQ:DP        1|0:100:34      1|1:57:21       1|1:100:64
+7      47656590        rs921576        A       C       .       PASS    AA=C;DP=149     GT:GQ:DP        1|0:100:34      1|1:57:26       1|1:100:88
+10     59599349        rs1769020       C       T       .       PASS    AA=c;DP=121     GT:GQ:DP        1|0:100:34      1|1:60:20       1|1:100:69
+10     59642305        rs2153283       C       A       .       PASS    AA=A;DP=125     GT:GQ:DP        1|0:100:34      1|1:60:21       1|1:100:68
+4      110890256       rs7441380       G       C       .       PASS    AA=C;DP=137     GT:GQ:DP        1|0:100:34      1|1:62:28       1|1:100:71
+5      157475210       rs1744361       A       G       .       PASS    AA=G;DP=116     GT:GQ:DP        1|0:100:34      1|1:63:22       1|1:100:60
+15     78339078        rs893219        T       C       .       PASS    AA=C;DP=128     GT:GQ:DP        1|0:100:34      1|1:66:22       1|1:100:67
+13     98442695        rs2031448       C       T       .       PASS    AA=T;DP=115     GT:GQ:DP        1|0:100:34      1|1:66:23       1|1:100:61
+13     42370923        rs17063823      A       G       .       PASS    AA=A;DP=122     GT:GQ:DP        1|0:100:34      1|1:66:23       1|1:100:64
+20     35513721        rs6018621       A       G       .       PASS    AA=G;DP=154     GT:GQ:DP        1|0:100:34      1|1:66:23       1|1:100:95
+3      140338732       rs9836328       G       A       .       PASS    AA=A;DP=142     GT:GQ:DP        1|0:100:34      1|1:69:23       1|1:100:85
+5      75518658        rs1002541       G       A       .       PASS    AA=G;DP=148     GT:GQ:DP        1|0:100:34      1|1:72:24       1|1:100:54
+6      30180700        rs2248289       T       C       .       PASS    AA=T;DP=131     GT:GQ:DP        1|0:100:34      1|1:72:24       1|1:100:71
+9      128457977       rs7874639       G       A       .       PASS    AA=G;DP=130     GT:GQ:DP        1|0:100:34      1|1:72:24       1|1:100:74
+4      48285363        rs13127730      C       T       .       PASS    AA=C;DP=143     GT:GQ:DP        1|0:100:34      1|1:72:25       1|1:100:43
+16     26090285        rs6497931       T       C       .       PASS    AA=A;DP=122     GT:GQ:DP        1|0:100:34      1|1:72:27       1|1:100:49
+10     90894143        .       G       T       .       PASS    AA=T;DP=111     GT:GQ:DP        1|0:100:34      1|1:75:25       1|1:100:43
+4      37201282        rs2380725       T       C       .       PASS    AA=C;DP=118     GT:GQ:DP        1|0:100:34      1|1:75:25       1|1:100:59
+13     84106281        rs3127542       G       A       .       PASS    AA=G;DP=124     GT:GQ:DP        1|0:100:34      1|1:75:26       1|1:100:64
+6      105844673       rs1190040       T       C       .       PASS    AA=T;DP=121     GT:GQ:DP        1|0:100:34      1|1:75:31       1|1:100:57
+6      23285084        rs6940447       C       A       .       PASS    AA=C;DP=129     GT:GQ:DP        1|0:100:34      1|1:77:32       1|1:100:66
+6      72968194        rs1819060       T       A       .       PASS    AA=A;DP=131     GT:GQ:DP        1|0:100:34      1|1:78:26       1|1:100:73
+4      180994592       rs6842257       G       A       .       PASS    AA=G;DP=126     GT:GQ:DP        1|0:100:34      1|1:78:27       1|1:100:64
+8      38002549        rs28859683      T       C       .       PASS    AA=t;DP=138     GT:GQ:DP        1|0:100:34      1|1:81:27       1|1:100:77
+17     77161501        rs7405646       A       G       .       PASS    AA=G;DP=150     GT:GQ:DP        1|0:100:34      1|1:81:27       1|1:100:83
+1      155935373       .       A       G       .       PASS    AA=A;DP=125     GT:GQ:DP        1|0:100:34      1|1:81:28       1|1:100:62
+2      30715013        rs4952166       A       G       .       PASS    AA=A;DP=134     GT:GQ:DP        1|0:100:34      1|1:81:28       1|1:100:71
+11     117800327       rs12274926      T       C       .       PASS    AA=t;DP=138     GT:GQ:DP        1|0:100:34      1|1:93:31       1|1:100:75
+10     54203524        rs11003126      A       G       .       PASS    AA=G;DP=138     GT:GQ:DP        1|0:100:34      1|1:96:34       1|1:100:69
+3      509058  rs9854339       T       C       .       PASS    AA=T;DP=142     GT:GQ:DP        1|0:100:35      0|0:100:34      1|0:100:75
+3      157519795       .       A       G       .       PASS    AA=A;DP=160     GT:GQ:DP        1|0:100:35      0|0:100:34      1|0:100:90
+3      70214473        .       A       G       .       PASS    AA=A;DP=176     GT:GQ:DP        1|0:100:35      0|0:100:37      1|0:100:58
+12     104978001       rs3851641       A       G       .       PASS    AA=A;DP=129     GT:GQ:DP        1|0:100:35      0|0:100:38      1|0:100:58
+12     11169243        rs13303166      G       C       .       PASS    AA=g;DP=145     GT:GQ:DP        1|0:100:35      0|0:100:38      1|0:92:61
+2      212087100       rs61469109      T       C       .       PASS    AA=T;DP=130     GT:GQ:DP        1|0:100:35      0|0:100:39      1|0:100:54
+11     560072  rs10902173      T       C       .       PASS    AA=T;DP=132     GT:GQ:DP        1|0:100:35      0|0:18:10       1|0:100:89
+8      13743587        rs11203535      C       A       .       PASS    AA=C;DP=88      GT:GQ:DP        1|0:100:35      0|0:20:11       1|0:100:33
+11     116105610       rs12279373      A       G       .       PASS    AA=A;DP=120     GT:GQ:DP        1|0:100:35      0|0:28:14       1|0:100:70
+4      8257368 rs1983342       T       A       .       PASS    AA=T;DP=127     GT:GQ:DP        1|0:100:35      0|0:29:10       1|0:100:80
+1      25334510        rs11805177      T       C       .       PASS    AA=C;DP=98      GT:GQ:DP        1|0:100:35      0|0:29:15       1|0:100:49
+7      155371949       .       G       C       .       PASS    AA=G;DP=91      GT:GQ:DP        1|0:100:35      0|0:32:10       1|0:100:34
+8      25690494        rs2278143       A       G       .       PASS    AA=A;DP=137     GT:GQ:DP        1|0:100:35      0|0:32:21       1|0:100:83
+17     77786067        rs4077540       C       G       .       PASS    AA=C;DP=96      GT:GQ:DP        1|0:100:35      0|0:35:11       1|0:100:46
+6      144248158       rs9496799       A       C       .       PASS    AA=C;DP=125     GT:GQ:DP        1|0:100:35      0|0:35:24       1|0:100:69
+7      135311406       rs59583641      C       A       .       PASS    AA=C;DP=139     GT:GQ:DP        1|0:100:35      0|0:38:32       1|0:100:72
+6      153793010       .       A       G       .       PASS    AA=A;DP=144     GT:GQ:DP        1|0:100:35      0|0:39:26       1|0:100:80
+11     42832806        .       T       G       .       PASS    AA=T;DP=111     GT:GQ:DP        1|0:100:35      0|0:40:24       1|0:100:54
+1      166200618       rs10918800      C       T       .       PASS    AA=T;DP=132;HM2 GT:GQ:DP        1|0:100:35      0|0:40:24       1|0:100:76
+1      62664670        rs13375306      G       A       .       PASS    AA=G;DP=124;HM2;HM3     GT:GQ:DP        1|0:100:35      0|0:41:13       1|0:100:77
+22     42932572        .       T       C       .       PASS    AA=T;DP=135     GT:GQ:DP        1|0:100:35      0|0:41:13       1|0:100:89
+20     14340900        .       G       A       .       PASS    AA=G;DP=97      GT:GQ:DP        1|0:100:35      0|0:41:14       1|0:100:39
+1      30576241        .       C       A       .       PASS    AA=C;DP=120     GT:GQ:DP        1|0:100:35      0|0:41:22       1|0:100:63
+3      127542606       rs57103542      A       G       .       PASS    AA=A;DP=124     GT:GQ:DP        1|0:100:35      0|0:43:25       1|0:100:63
+2      100541264       rs12151415      C       A       .       PASS    AA=c;DP=139     GT:GQ:DP        1|0:100:35      0|0:43:25       1|0:100:79
+10     516773  rs7096725       G       A       .       PASS    AA=G;DP=112     GT:GQ:DP        1|0:100:35      0|0:44:14       1|0:100:64
+10     121417320       rs7099687       A       G       .       PASS    AA=A;DP=128     GT:GQ:DP        1|0:100:35      0|0:44:15       1|0:100:78
+5      115059745       rs2652664       C       A       .       PASS    AA=c;DP=144     GT:GQ:DP        1|0:100:35      0|0:46:30       1|0:100:35
+17     68081764        rs11869623      C       G       .       PASS    AA=C;DP=102     GT:GQ:DP        1|0:100:35      0|0:47:15       1|0:100:52
+6      170630180       rs58304208      G       T       .       PASS    AA=G;DP=105     GT:GQ:DP        1|0:100:35      0|0:47:15       1|0:100:57
+5      8597182 rs1700576       T       C       .       PASS    AA=C;DP=110     GT:GQ:DP        1|0:100:35      0|0:47:15       1|0:100:59
+5      133867447       rs60894994      C       T       .       PASS    AA=T;DP=131     GT:GQ:DP        1|0:100:35      0|0:47:15       1|0:100:77
+11     44516459        .       G       A       .       PASS    AA=G;DP=130     GT:GQ:DP        1|0:100:35      0|0:47:15       1|0:100:79
+9      106970305       rs12336968      T       C       .       PASS    AA=C;DP=120     GT:GQ:DP        1|0:100:35      0|0:47:17       1|0:100:70
+1      15642209        rs6701701       C       G       .       PASS    AA=A;DP=146;HM2 GT:GQ:DP        1|0:100:35      0|0:50:16       1|0:100:54
+11     80339173        rs1587326       C       T       .       PASS    AA=C;DP=117     GT:GQ:DP        1|0:100:35      0|0:50:16       1|0:100:62
+11     60594263        rs2905494       C       T       .       PASS    AA=c;DP=126     GT:GQ:DP        1|0:100:35      0|0:50:16       1|0:100:74
+2      205193909       rs16836406      G       A       .       PASS    AA=A;DP=137     GT:GQ:DP        1|0:100:35      0|0:50:16       1|0:100:81
+14     95729454        .       G       A       .       PASS    AA=G;DP=138     GT:GQ:DP        1|0:100:35      0|0:50:16       1|0:100:83
+8      31030585        rs16877672      C       T       .       PASS    AA=c;DP=118     GT:GQ:DP        1|0:100:35      0|0:50:18       1|0:100:66
+15     27383882        rs28399913      T       G       .       PASS    AA=T;DP=125     GT:GQ:DP        1|0:100:35      0|0:50:20       1|0:100:71
+12     91594948        rs7953265       T       C       .       PASS    AA=T;DP=139     GT:GQ:DP        1|0:100:35      0|0:51:27       1|0:100:74
+16     83560811        rs7189664       C       A       .       PASS    AA=C;DP=129     GT:GQ:DP        1|0:100:35      0|0:52:23       1|0:100:71
+4      138211128       rs10012302      G       C       .       PASS    AA=G;DP=122     GT:GQ:DP        1|0:100:35      0|0:53:17       1|0:100:69
+1      18125770        rs12408422      G       A       .       PASS    AA=A;DP=123;HM2;HM3     GT:GQ:DP        1|0:100:35      0|0:53:17       1|0:100:72
+11     67734473        .       T       C       .       PASS    AA=T;DP=130     GT:GQ:DP        1|0:100:35      0|0:53:17       1|0:100:79
+19     45059894        rs60369807      G       A       .       PASS    AA=G;DP=150     GT:GQ:DP        1|0:100:35      0|0:53:18       1|0:100:48
+8      143175919       .       A       G       .       PASS    AA=G;DP=106     GT:GQ:DP        1|0:100:35      0|0:53:18       1|0:100:52
+7      158179993       .       G       A       .       PASS    AA=G;DP=128     GT:GQ:DP        1|0:100:35      0|0:53:18       1|0:100:77
+4      8607287 .       C       T       .       PASS    AA=C;DP=133     GT:GQ:DP        1|0:100:35      0|0:53:19       1|0:100:78
+1      22789451        rs671485        T       C       .       PASS    AA=C;DP=134;HM2;HM3     GT:GQ:DP        1|0:100:35      0|0:53:19       1|0:100:80
+2      180664413       rs16867178      A       G       .       PASS    AA=A;DP=116     GT:GQ:DP        1|0:100:35      0|0:54:23       1|0:100:57
+11     1493815 rs9943494       C       G       .       PASS    AA=C;DP=122     GT:GQ:DP        1|0:100:35      0|0:56:18       1|0:100:69
+11     70379394        .       A       G       .       PASS    AA=G;DP=133     GT:GQ:DP        1|0:100:35      0|0:56:18       1|0:100:81
+1      10933440        rs1281009       G       A       .       PASS    AA=g;DP=139;HM2;HM3     GT:GQ:DP        1|0:100:35      0|0:56:18       1|0:100:87
+17     10162874        rs2074873       A       G       .       PASS    AA=G;DP=141     GT:GQ:DP        1|0:100:35      0|0:56:18       1|0:100:88
+20     10255626        rs6133868       C       T       .       PASS    AA=T;DP=146     GT:GQ:DP        1|0:100:35      0|0:56:18       1|0:100:94
+19     11197187        .       C       T       .       PASS    AA=C;DP=112     GT:GQ:DP        1|0:100:35      0|0:56:19       1|0:100:46
+3      188578751       rs59349298      C       T       .       PASS    AA=C;DP=143     GT:GQ:DP        1|0:100:35      0|0:56:19       1|0:100:50
+6      129124983       .       C       T       .       PASS    AA=c;DP=117     GT:GQ:DP        1|0:100:35      0|0:56:19       1|0:100:63
+17     73363584        rs62078467      G       A       .       PASS    AA=G;DP=142     GT:GQ:DP        1|0:100:35      0|0:56:19       1|0:100:88
+22     17966245        rs9618619       C       T       .       PASS    AA=C;DP=121     GT:GQ:DP        1|0:100:35      0|0:56:20       1|0:100:63
+14     94991935        rs10162578      G       A       .       PASS    AA=G;DP=126     GT:GQ:DP        1|0:100:35      0|0:56:20       1|0:100:74
+13     94576528        rs1564354       C       A       .       PASS    AA=A;DP=126     GT:GQ:DP        1|0:100:35      0|0:57:24       1|0:100:68
+2      47850100        rs759050        C       A       .       PASS    AA=A;DP=108     GT:GQ:DP        1|0:100:35      0|0:59:19       1|0:100:43
+8      98894056        rs10504979      T       C       .       PASS    AA=T;DP=153     GT:GQ:DP        1|0:100:35      0|0:59:19       1|0:100:54
+3      3247683 rs3856860       T       C       .       PASS    AA=N;DP=126     GT:GQ:DP        1|0:100:35      0|0:59:19       1|0:100:71
+7      114881351       rs60551311      A       C       .       PASS    AA=A;DP=125     GT:GQ:DP        1|0:100:35      0|0:59:19       1|0:100:72
+22     35903936        .       C       T       .       PASS    AA=C;DP=140     GT:GQ:DP        1|0:100:35      0|0:59:19       1|0:100:87
+14     64917126        .       A       G       .       PASS    AA=A;DP=123     GT:GQ:DP        1|0:100:35      0|0:59:20       1|0:100:68
+16     4853762 rs8048709       A       C       .       PASS    AA=C;DP=126     GT:GQ:DP        1|0:100:35      0|0:59:26       1|0:100:66
+1      168092897       .       A       G       .       PASS    AA=A;DP=113     GT:GQ:DP        1|0:100:35      0|0:62:20       1|0:100:57
+1      38818717        rs6600434       T       C       .       PASS    AA=T;DP=135;HM2;HM3     GT:GQ:DP        1|0:100:35      0|0:62:20       1|0:100:80
+19     17366248        rs10404346      C       T       .       PASS    AA=C;DP=151     GT:GQ:DP        1|0:100:35      0|0:62:21       1|0:100:43
+8      80814594        rs2979709       C       T       .       PASS    AA=C;DP=117     GT:GQ:DP        1|0:100:35      0|0:62:21       1|0:100:63
+2      145157310       rs13015001      G       A       .       PASS    AA=G;DP=120     GT:GQ:DP        1|0:100:35      0|0:62:21       1|0:100:68
+20     4260106 .       T       C       .       PASS    AA=T;DP=135     GT:GQ:DP        1|0:100:35      0|0:62:21       1|0:100:79
+13     58698120        rs9538340       C       G       .       PASS    AA=C;DP=142     GT:GQ:DP        1|0:100:35      0|0:62:21       1|0:100:87
+5      169524255       rs55800913      C       T       .       PASS    AA=T;DP=149     GT:GQ:DP        1|0:100:35      0|0:63:27       1|0:100:89
+13     35797230        rs7998522       C       G       .       PASS    AA=c;DP=103     GT:GQ:DP        1|0:100:35      0|0:65:21       1|0:100:46
+1      34623898        rs57909951      T       A       .       PASS    AA=T;DP=123     GT:GQ:DP        1|0:100:35      0|0:65:21       1|0:100:68
+11     6129409 rs325694        A       G       .       PASS    AA=G;DP=131     GT:GQ:DP        1|0:100:35      0|0:65:21       1|0:100:74
+10     123578516       rs7094770       T       C       .       PASS    AA=T;DP=154     GT:GQ:DP        1|0:100:35      0|0:65:21       1|0:100:96
+3      183373368       .       G       A       .       PASS    AA=A;DP=120     GT:GQ:DP        1|0:100:35      0|0:65:22       1|0:100:64
+2      101214230       .       T       C       .       PASS    AA=t;DP=118     GT:GQ:DP        1|0:100:35      0|0:65:22       1|0:100:65
+3      173432843       rs4243423       A       G       .       PASS    AA=A;DP=126     GT:GQ:DP        1|0:100:35      0|0:65:22       1|0:100:70
+2      54868528        rs13000120      A       G       .       PASS    AA=A;DP=133     GT:GQ:DP        1|0:100:35      0|0:65:22       1|0:100:79
+14     78684173        .       A       G       .       PASS    AA=A;DP=137     GT:GQ:DP        1|0:100:35      0|0:65:23       1|0:100:82
+16     85255789        .       G       T       .       PASS    AA=G;DP=136     GT:GQ:DP        1|0:100:35      0|0:65:27       1|0:100:34
+10     107547879       rs10509806      G       C       .       PASS    AA=G;DP=125     GT:GQ:DP        1|0:100:35      0|0:67:29       1|0:100:60
+7      9823390 rs318999        G       A       .       PASS    AA=G;DP=134     GT:GQ:DP        1|0:100:35      0|0:68:22       1|0:100:78
+5      40442790        rs10072596      A       G       .       PASS    AA=A;DP=152     GT:GQ:DP        1|0:100:35      0|0:68:22       1|0:100:90
+5      156045344       rs157671        T       A       .       PASS    AA=T;DP=149     GT:GQ:DP        1|0:100:35      0|0:68:23       1|0:100:38
+22     29543933        .       G       A       .       PASS    AA=G;DP=146     GT:GQ:DP        1|0:100:35      0|0:68:23       1|0:100:68
+1      158033781       .       G       C       .       PASS    AA=G;DP=132     GT:GQ:DP        1|0:100:35      0|0:68:23       1|0:100:74
+1      162198586       .       C       A       .       PASS    AA=C;DP=132     GT:GQ:DP        1|0:100:35      0|0:68:23       1|0:100:75
+2      38245817        rs232571        T       C       .       PASS    AA=C;DP=151     GT:GQ:DP        1|0:100:35      0|0:70:28       1|0:100:89
+10     96927788        rs12268453      G       T       .       PASS    AA=G;DP=132     GT:GQ:DP        1|0:100:35      0|0:71:23       1|0:100:36
+10     61949782        rs2393640       T       G       .       PASS    AA=G;DP=110     GT:GQ:DP        1|0:100:35      0|0:71:23       1|0:100:50
+10     99499959        rs3750615       T       C       .       PASS    AA=C;DP=118     GT:GQ:DP        1|0:100:35      0|0:71:23       1|0:100:61
+12     39426846        rs1596538       G       A       .       PASS    AA=g;DP=123     GT:GQ:DP        1|0:100:35      0|0:71:23       1|0:100:64
+3      65822123        rs59459025      G       C       .       PASS    AA=G;DP=130     GT:GQ:DP        1|0:100:35      0|0:71:23       1|0:100:74
+1      42031068        .       A       T       .       PASS    AA=A;DP=167     GT:GQ:DP        1|0:100:35      0|0:71:24       1|0:100:109
+5      465694  rs4956936       C       T       .       PASS    AA=C;DP=116     GT:GQ:DP        1|0:100:35      0|0:71:24       1|0:100:58
+10     90735196        rs11202921      T       G       .       PASS    AA=T;DP=150     GT:GQ:DP        1|0:100:35      0|0:71:24       1|0:100:80
+14     103598055       rs34974386      T       A       .       PASS    AA=T;DP=142     GT:GQ:DP        1|0:100:35      0|0:71:24       1|0:100:82
+6      105081716       rs2153198       G       A       .       PASS    AA=g;DP=125     GT:GQ:DP        1|0:100:35      0|0:71:25       1|0:100:64
+6      147927800       rs7772025       C       G       .       PASS    AA=C;DP=124     GT:GQ:DP        1|0:100:35      0|0:71:25       1|0:100:65
+1      82088802        .       A       G       .       PASS    AA=A;DP=132     GT:GQ:DP        1|0:100:35      0|0:71:26       1|0:100:74
+9      4342674 rs58865397      T       A       .       PASS    AA=A;DP=113     GT:GQ:DP        1|0:100:35      0|0:71:29       1|0:100:38
+14     65762837        .       C       T       .       PASS    AA=C;DP=137     GT:GQ:DP        1|0:100:35      0|0:72:35       1|0:100:68
+8      118410822       rs56113601      G       T       .       PASS    AA=T;DP=142     GT:GQ:DP        1|0:100:35      0|0:73:31       1|0:100:74
+17     63779443        rs7216446       A       C       .       PASS    AA=a;DP=124     GT:GQ:DP        1|0:100:35      0|0:74:24       1|0:100:67
+18     34074331        rs8083163       C       G       .       PASS    AA=C;DP=130     GT:GQ:DP        1|0:100:35      0|0:74:25       1|0:100:65
+15     49470755        .       C       T       .       PASS    AA=C;DP=119     GT:GQ:DP        1|0:100:35      0|0:74:26       1|0:100:45
+11     122306458       rs7934356       G       A       .       PASS    AA=G;DP=120     GT:GQ:DP        1|0:100:35      0|0:74:26       1|0:100:58
+7      47840479        .       C       T       .       PASS    AA=t;DP=135     GT:GQ:DP        1|0:100:35      0|0:74:26       1|0:100:72
+5      138730072       .       A       G       .       PASS    AA=A;DP=131     GT:GQ:DP        1|0:100:35      0|0:74:32       1|0:100:67
+20     53533299        rs17301350      T       C       .       PASS    AA=T;DP=123     GT:GQ:DP        1|0:100:35      0|0:77:25       1|0:100:63
+21     26081662        rs57165987      T       C       .       PASS    AA=T;DP=126     GT:GQ:DP        1|0:100:35      0|0:77:25       1|0:100:65
+1      163961827       rs16849835      A       C       .       PASS    AA=A;DP=129;HM2;HM3     GT:GQ:DP        1|0:100:35      0|0:77:25       1|0:100:70
+1      45296480        rs3850855       T       C       .       PASS    AA=t;DP=148;HM3 GT:GQ:DP        1|0:100:35      0|0:77:25       1|0:100:87
+5      143026731       rs890710        C       T       .       PASS    AA=C;DP=151     GT:GQ:DP        1|0:100:35      0|0:77:26       1|0:100:44
+7      120258389       .       T       C       .       PASS    AA=T;DP=129     GT:GQ:DP        1|0:100:35      0|0:77:26       1|0:100:66
+15     98895062        .       T       C       .       PASS    AA=T;DP=164     GT:GQ:DP        1|0:100:35      0|0:77:27       1|0:100:99
+8      136740146       rs6992027       G       A       .       PASS    AA=G;DP=131     GT:GQ:DP        1|0:100:35      0|0:77:31       1|0:100:66
+9      73551561        .       T       G       .       PASS    AA=T;DP=141     GT:GQ:DP        1|0:100:35      0|0:77:34       1|0:100:73
+2      173024769       rs16860412      C       T       .       PASS    AA=C;DP=150     GT:GQ:DP        1|0:100:35      0|0:80:26       1|0:100:45
+7      77323069        .       G       A       .       PASS    AA=G;DP=160     GT:GQ:DP        1|0:100:35      0|0:80:26       1|0:100:51
+1      215659893       rs2998900       G       A       .       PASS    AA=G;DP=124;HM2 GT:GQ:DP        1|0:100:35      0|0:80:26       1|0:100:52
+13     27774214        rs7326277       T       C       .       PASS    AA=T;DP=160     GT:GQ:DP        1|0:100:35      0|0:80:26       1|0:100:56
+4      53936939        .       G       A       .       PASS    AA=G;DP=119     GT:GQ:DP        1|0:100:35      0|0:80:26       1|0:100:58
+11     93931371        rs58502184      C       T       .       PASS    AA=C;DP=142     GT:GQ:DP        1|0:100:35      0|0:80:26       1|0:100:81
+7      133555280       .       C       T       .       PASS    AA=T;DP=142     GT:GQ:DP        1|0:100:35      0|0:80:26       1|0:100:84
+8      89367315        rs1879203       C       T       .       PASS    AA=T;DP=148     GT:GQ:DP        1|0:100:35      0|0:80:27       1|0:100:86
+14     89392811        rs56934808      T       C       .       PASS    AA=T;DP=126     GT:GQ:DP        1|0:100:35      0|0:80:28       1|0:100:61
+20     5153452 .       A       G       .       PASS    AA=A;DP=139     GT:GQ:DP        1|0:100:35      0|0:80:28       1|0:100:73
+14     93725719        rs59551990      A       T       .       PASS    AA=A;DP=147     GT:GQ:DP        1|0:100:35      0|0:83:27       1|0:100:46
+22     24998690        rs617016        T       C       .       PASS    AA=T;DP=126     GT:GQ:DP        1|0:100:35      0|0:83:27       1|0:100:66
+12     106707430       rs59900461      T       C       .       PASS    AA=T;DP=155     GT:GQ:DP        1|0:100:35      0|0:83:28       1|0:100:53
+3      186149049       rs9820111       C       T       .       PASS    AA=C;DP=140     GT:GQ:DP        1|0:100:35      0|0:83:29       1|0:100:75
+5      57709678        .       C       A       .       PASS    AA=C;DP=136     GT:GQ:DP        1|0:100:35      0|0:86:28       1|0:100:76
+4      10598106        rs2046359       C       A       .       PASS    AA=c;DP=156     GT:GQ:DP        1|0:100:35      0|0:86:28       1|0:100:94
+17     14846271        rs9911363       G       A       .       PASS    AA=g;DP=151     GT:GQ:DP        1|0:100:35      0|0:86:29       1|0:100:42
+20     443739  rs2268628       T       A       .       PASS    AA=T;DP=117     GT:GQ:DP        1|0:100:35      0|0:86:29       1|0:100:42
+5      49675866        rs6874682       A       G       .       PASS    AA=A;DP=135     GT:GQ:DP        1|0:100:35      0|0:86:29       1|0:100:54
+14     93002011        rs11160119      G       A       .       PASS    AA=G;DP=119     GT:GQ:DP        1|0:100:35      0|0:86:29       1|0:100:57
+18     74146821        rs9952237       G       A       .       PASS    AA=G;DP=149     GT:GQ:DP        1|0:100:35      0|0:86:29       1|0:100:85
+8      133598628       .       T       C       .       PASS    AA=T;DP=130     GT:GQ:DP        1|0:100:35      0|0:89:29       1|0:100:68
+8      133426240       rs16904663      G       T       .       PASS    AA=G;DP=140     GT:GQ:DP        1|0:100:35      0|0:89:29       1|0:100:74
+3      101908970       rs13433684      G       A       .       PASS    AA=G;DP=149     GT:GQ:DP        1|0:100:35      0|0:89:29       1|0:100:79
+16     51091432        .       T       C       .       PASS    AA=T;DP=144     GT:GQ:DP        1|0:100:35      0|0:89:30       1|0:100:80
+17     51391813        rs9916505       C       T       .       PASS    AA=T;DP=137     GT:GQ:DP        1|0:100:35      0|0:89:31       1|0:100:72
+11     40620253        rs12808435      A       C       .       PASS    AA=A;DP=126     GT:GQ:DP        1|0:100:35      0|0:92:30       1|0:100:62
+1      30774873        rs57026818      C       A       .       PASS    AA=c;DP=139     GT:GQ:DP        1|0:100:35      0|0:92:30       1|0:100:72
+10     129301247       rs10765139      G       A       .       PASS    AA=g;DP=144     GT:GQ:DP        1|0:100:35      0|0:92:30       1|0:100:78
+16     1820741 rs62038394      G       A       .       PASS    AA=A;DP=146     GT:GQ:DP        1|0:100:35      0|0:92:30       1|0:100:81
+2      112495938       rs62162483      G       A       .       PASS    AA=G;DP=149     GT:GQ:DP        1|0:100:35      0|0:92:30       1|0:100:82
+2      20827499        rs59014748      A       G       .       PASS    AA=A;DP=144     GT:GQ:DP        1|0:100:35      0|0:93:34       1|0:100:61
+3      16358059        rs7615111       A       G       .       PASS    AA=A;DP=131     GT:GQ:DP        1|0:100:35      0|0:95:31       1|0:100:66
+13     95312879        rs4773928       A       C       .       PASS    AA=A;DP=141     GT:GQ:DP        1|0:100:35      0|0:95:31       1|0:100:75
+4      47378330        rs57682385      A       T       .       PASS    AA=A;DP=132     GT:GQ:DP        1|0:100:35      0|0:95:32       1|0:100:64
+17     67481428        .       T       C       .       PASS    AA=T;DP=134     GT:GQ:DP        1|0:100:35      0|0:95:32       1|0:100:68
+11     113808606       rs12361873      C       T       .       PASS    AA=T;DP=155     GT:GQ:DP        1|0:100:35      0|0:95:34       1|0:100:88
+6      105028007       rs13207723      C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        1|0:100:35      1|0:100:16      1|1:100:61
+4      115316376       rs35796752      A       G       .       PASS    AA=A;DP=129     GT:GQ:DP        1|0:100:35      1|0:100:17      1|1:100:77
+20     1843570 .       C       T       .       PASS    AA=c;DP=135     GT:GQ:DP        1|0:100:35      1|0:100:19      1|1:100:41
+15     77603250        rs955664        T       C       .       PASS    AA=T;DP=117     GT:GQ:DP        1|0:100:35      1|0:100:19      1|1:100:63
+8      103467123       rs16869421      T       C       .       PASS    AA=T;DP=117     GT:GQ:DP        1|0:100:35      1|0:100:19      1|1:100:63
+19     44540582        rs7250420       G       C       .       PASS    AA=N;DP=111     GT:GQ:DP        1|0:100:35      1|0:100:19      1|1:70:58
+6      160095809       rs9365093       C       G       .       PASS    AA=G;DP=121     GT:GQ:DP        1|0:100:35      1|0:100:21      1|1:100:66
+2      20739867        rs746776        G       A       .       PASS    AA=A;DP=126     GT:GQ:DP        1|0:100:35      1|0:100:22      1|1:100:68
+13     75189961        rs8002635       G       A       .       PASS    AA=G;DP=128     GT:GQ:DP        1|0:100:35      1|0:100:22      1|1:100:70
+17     45732603        rs12940308      T       C       .       PASS    AA=T;DP=111     GT:GQ:DP        1|0:100:35      1|0:100:23      1|1:100:54
+14     88858120        rs11622771      C       T       .       PASS    AA=C;DP=126     GT:GQ:DP        1|0:100:35      1|0:100:24      1|1:100:68
+2      240493646       .       T       A       .       PASS    AA=N;DP=135     GT:GQ:DP        1|0:100:35      1|0:100:24      1|1:100:77
+5      5870868 rs3863204       T       C       .       PASS    AA=T;DP=122     GT:GQ:DP        1|0:100:35      1|0:100:25      1|1:100:64
+6      21861872        rs1322886       G       A       .       PASS    AA=A;DP=134     GT:GQ:DP        1|0:100:35      1|0:100:25      1|1:100:74
+9      35297408        rs572527        C       A       .       PASS    AA=A;DP=148     GT:GQ:DP        1|0:100:35      1|0:100:25      1|1:100:88
+1      229277533       rs4406614       C       A       .       PASS    AA=A;DP=119     GT:GQ:DP        1|0:100:35      1|0:100:26      1|1:100:47
+3      187838526       .       A       C       .       PASS    AA=a;DP=126     GT:GQ:DP        1|0:100:35      1|0:100:26      1|1:100:63
+16     85385501        rs2059286       C       T       .       PASS    AA=C;DP=119     GT:GQ:DP        1|0:100:35      1|0:100:27      1|1:100:56
+5      145329652       .       T       C       .       PASS    AA=C;DP=125     GT:GQ:DP        1|0:100:35      1|0:100:27      1|1:100:66
+1      1207949 rs6603788       C       T       .       PASS    AA=T;DP=149;HM3 GT:GQ:DP        1|0:100:35      1|0:100:27      1|1:100:88
+3      120377849       .       G       A       .       PASS    AA=G;DP=145     GT:GQ:DP        1|0:100:35      1|0:100:28      1|1:100:82
+1      100067686       rs57533986      A       G       .       PASS    AA=A;DP=134     GT:GQ:DP        1|0:100:35      1|0:100:30      1|1:100:68
+6      7662072 rs2327010       T       G       .       PASS    AA=T;DP=107     GT:GQ:DP        1|0:100:35      1|0:100:30      1|1:90:31
+1      48906248        rs6663376       T       C       .       PASS    AA=C;DP=146;HM2;HM3     GT:GQ:DP        1|0:100:35      1|0:100:33      1|1:100:38
+1      66783242        rs4655617       A       C       .       PASS    AA=C;DP=154;HM2;HM3     GT:GQ:DP        1|0:100:35      1|0:100:34      1|1:100:83
+3      116668092       rs57153740      C       T       .       PASS    AA=C;DP=158     GT:GQ:DP        1|0:100:35      1|0:100:35      1|1:100:86
+2      67990629        rs6705938       C       T       .       PASS    AA=T;DP=145     GT:GQ:DP        1|0:100:35      1|0:100:36      1|1:100:73
+19     11267458        rs403027        C       T       .       PASS    AA=c;DP=113     GT:GQ:DP        1|0:100:35      1|0:53:17       1|1:100:61
+19     7822475 rs2452012       T       C       .       PASS    AA=C;DP=100     GT:GQ:DP        1|0:100:35      1|0:58:9        1|1:99:57
+10     26647374        rs12572822      C       A       .       PASS    AA=C;DP=124     GT:GQ:DP        1|0:100:35      1|0:60:16       1|1:100:74
+4      185607461       rs3775576       C       A       .       PASS    AA=A;DP=126     GT:GQ:DP        1|0:100:35      1|0:77:12       1|1:100:79
+16     5426299 rs12596488      C       T       .       PASS    AA=C;DP=125     GT:GQ:DP        1|0:100:35      1|0:80:16       1|1:100:73
+5      133253991       rs903076        C       G       .       PASS    AA=N;DP=135     GT:GQ:DP        1|0:100:35      1|0:82:17       1|1:100:77
+3      36997807        rs4678921       T       C       .       PASS    AA=T;DP=111     GT:GQ:DP        1|0:100:35      1|0:85:17       1|1:100:59
+5      169562588       rs13354784      C       T       .       PASS    AA=T;DP=139     GT:GQ:DP        1|0:100:35      1|0:88:32       1|1:100:75
+21     38236356        rs60418075      C       T       .       PASS    AA=C;DP=122     GT:GQ:DP        1|0:100:35      1|0:97:26       1|1:100:61
+4      165048554       rs4267695       T       C       .       PASS    AA=C;DP=147     GT:GQ:DP        1|0:100:35      1|1:100:36      1|1:100:80
+2      113750655       rs11689813      C       A       .       PASS    AA=C;DP=105     GT:GQ:DP        1|0:100:35      1|1:11:14       1|1:100:57
+8      5910951 rs2897872       C       T       .       PASS    AA=C;DP=111     GT:GQ:DP        1|0:100:35      1|1:22:18       1|1:100:55
+17     18750727        rs4924944       G       A       .       PASS    AA=A;DP=140     GT:GQ:DP        1|0:100:35      1|1:25:24       1|1:100:81
+16     31475102        rs56354977      C       T       .       PASS    AA=c;DP=106     GT:GQ:DP        1|0:100:35      1|1:26:16       1|1:48:54
+15     82375138        rs2030840       G       C       .       PASS    AA=C;DP=134     GT:GQ:DP        1|0:100:35      1|1:37:23       1|1:100:75
+3      133501798       rs11713322      G       A       .       PASS    AA=A;DP=134     GT:GQ:DP        1|0:100:35      1|1:38:24       1|1:100:79
+14     58811516        rs1269009       T       G       .       PASS    AA=G;DP=110     GT:GQ:DP        1|0:100:35      1|1:39:13       1|1:100:61
+10     98199973        rs2861583       T       C       .       PASS    AA=T;DP=127     GT:GQ:DP        1|0:100:35      1|1:39:15       1|1:100:78
+19     48267027        rs10425508      T       C       .       PASS    AA=C;DP=88      GT:GQ:DP        1|0:100:35      1|1:39:15       1|1:96:32
+2      29132410        rs2084262       C       T       .       PASS    AA=T;DP=148     GT:GQ:DP        1|0:100:35      1|1:39:25       1|1:100:86
+11     102012990       rs1940477       C       A       .       PASS    AA=A;DP=102     GT:GQ:DP        1|0:100:35      1|1:41:25       1|1:72:32
+14     33333506        rs7148934       C       T       .       PASS    AA=T;DP=119     GT:GQ:DP        1|0:100:35      1|1:42:22       1|1:100:46
+22     42968286        rs9614393       T       C       .       PASS    AA=T;DP=149     GT:GQ:DP        1|0:100:35      1|1:44:26       1|1:100:88
+14     81412267        rs11844087      A       G       .       PASS    AA=A;DP=105     GT:GQ:DP        1|0:100:35      1|1:45:17       1|1:100:54
+9      37094860        rs10973210      T       C       .       PASS    AA=C;DP=111     GT:GQ:DP        1|0:100:35      1|1:47:22       1|1:100:45
+10     3941815 rs61367393      G       A       .       PASS    AA=G;DP=117     GT:GQ:DP        1|0:100:35      1|1:48:17       1|1:100:69
+14     51311916        rs7145865       G       A       .       PASS    AA=G;DP=123     GT:GQ:DP        1|0:100:35      1|1:48:17       1|1:100:71
+12     123234778       rs11057494      T       G       .       PASS    AA=T;DP=123     GT:GQ:DP        1|0:100:35      1|1:51:17       1|1:100:72
+14     102078591       rs4906219       G       A       .       PASS    AA=G;DP=106     GT:GQ:DP        1|0:100:35      1|1:51:19       1|1:100:48
+5      79412144        rs2434301       A       G       .       PASS    AA=G;DP=116     GT:GQ:DP        1|0:100:35      1|1:51:22       1|1:100:62
+10     16723600        rs11254120      C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        1|0:100:35      1|1:54:19       1|1:100:58
+17     13650224        rs11868579      G       A       .       PASS    AA=A;DP=131     GT:GQ:DP        1|0:100:35      1|1:54:19       1|1:100:77
+11     15805423        rs1440708       T       C       .       PASS    AA=C;DP=122     GT:GQ:DP        1|0:100:35      1|1:54:20       1|1:100:65
+13     102783981       rs7327132       C       G       .       PASS    AA=c;DP=114     GT:GQ:DP        1|0:100:35      1|1:54:25       1|1:100:39
+12     46019316        rs215346        G       C       .       PASS    AA=G;DP=106     GT:GQ:DP        1|0:100:35      1|1:57:19       1|1:100:47
+3      7938891 rs6443140       T       C       .       PASS    AA=C;DP=113     GT:GQ:DP        1|0:100:35      1|1:57:19       1|1:100:60
+1      31573166        rs4949205       A       G       .       PASS    AA=G;DP=103     GT:GQ:DP        1|0:100:35      1|1:57:19       1|1:55:47
+14     104551473       rs7151958       G       C       .       PASS    AA=G;DP=123     GT:GQ:DP        1|0:100:35      1|1:57:20       1|1:100:68
+5      27512233        rs1989419       T       C       .       PASS    AA=C;DP=109     GT:GQ:DP        1|0:100:35      1|1:57:20       1|1:93:55
+2      20564381        rs342088        A       G       .       PASS    AA=G;DP=118     GT:GQ:DP        1|0:100:35      1|1:57:21       1|1:100:63
+2      45210793        rs6727021       C       T       .       PASS    AA=T;DP=156     GT:GQ:DP        1|0:100:35      1|1:60:20       1|1:100:87
+1      228878779       rs2182795       T       C       .       PASS    AA=t;DP=104     GT:GQ:DP        1|0:100:35      1|1:60:21       1|1:100:49
+6      44180383        rs9381290       A       G       .       PASS    AA=G;DP=140     GT:GQ:DP        1|0:100:35      1|1:60:21       1|1:100:84
+3      73636053        rs6419781       C       G       .       PASS    AA=G;DP=155     GT:GQ:DP        1|0:100:35      1|1:60:24       1|1:100:48
+5      145989011       rs322486        C       G       .       PASS    AA=C;DP=133     GT:GQ:DP        1|0:100:35      1|1:60:26       1|1:100:73
+22     18201819        rs6518584       T       C       .       PASS    AA=C;DP=131     GT:GQ:DP        1|0:100:35      1|1:63:27       1|1:100:71
+3      99513972        rs58642779      C       T       .       PASS    AA=C;DP=129     GT:GQ:DP        1|0:100:35      1|1:65:36       1|1:100:46
+3      130075147       rs6768014       A       G       .       PASS    AA=G;DP=109     GT:GQ:DP        1|0:100:35      1|1:66:22       1|1:90:53
+6      169094419       rs2180331       G       A       .       PASS    AA=A;DP=93      GT:GQ:DP        1|0:100:35      1|1:66:23       1|1:69:23
+10     79658962        rs1249138       G       A       .       PASS    AA=A;DP=162     GT:GQ:DP        1|0:100:35      1|1:69:23       1|1:100:104
+4      169679143       rs5005000       C       T       .       PASS    AA=T;DP=125     GT:GQ:DP        1|0:100:35      1|1:69:23       1|1:100:69
+4      64572620        rs13136645      T       C       .       PASS    AA=T;DP=117     GT:GQ:DP        1|0:100:35      1|1:72:24       1|1:100:60
+9      14820821        rs7868862       T       C       .       PASS    AA=T;DP=144     GT:GQ:DP        1|0:100:35      1|1:72:26       1|1:100:83
+10     62992281        rs2650733       C       A       .       PASS    AA=A;DP=126     GT:GQ:DP        1|0:100:35      1|1:72:34       1|1:100:54
+5      82408421        rs2075685       G       T       .       PASS    AA=T;DP=138     GT:GQ:DP        1|0:100:35      1|1:75:25       1|1:100:73
+5      32998002        rs1494655       A       T       .       PASS    AA=T;DP=145     GT:GQ:DP        1|0:100:35      1|1:75:25       1|1:100:74
+2      217414416       rs1179711       A       T       .       PASS    AA=T;DP=135     GT:GQ:DP        1|0:100:35      1|1:75:25       1|1:100:78
+2      143999567       rs4309526       G       A       .       PASS    AA=A;DP=129     GT:GQ:DP        1|0:100:35      1|1:75:26       1|1:100:67
+15     95837935        rs8041854       A       C       .       PASS    AA=C;DP=122     GT:GQ:DP        1|0:100:35      1|1:75:27       1|1:100:48
+16     17601648        rs8052691       C       T       .       PASS    AA=T;DP=133     GT:GQ:DP        1|0:100:35      1|1:77:32       1|1:100:70
+3      3369719 rs9844157       C       T       .       PASS    AA=T;DP=131     GT:GQ:DP        1|0:100:35      1|1:78:27       1|1:100:69
+2      171054492       rs7595003       A       G       .       PASS    AA=A;DP=133     GT:GQ:DP        1|0:100:35      1|1:78:28       1|1:90:31
+17     8437839 rs444629        T       C       .       PASS    AA=T;DP=101     GT:GQ:DP        1|0:100:35      1|1:81:27       1|1:93:31
+1      9419068 rs56770788      C       T       .       PASS    AA=c;DP=136     GT:GQ:DP        1|0:100:35      1|1:81:28       1|1:100:75
+8      87205436        rs17603302      C       T       .       PASS    AA=C;DP=131     GT:GQ:DP        1|0:100:35      1|1:84:28       1|1:100:69
+5      152050363       rs2964250       A       G       .       PASS    AA=G;DP=140     GT:GQ:DP        1|0:100:35      1|1:84:29       1|1:100:73
+6      42779108        rs434439        C       G       .       PASS    AA=c;DP=152     GT:GQ:DP        1|0:100:35      1|1:84:30       1|1:100:91
+13     73978918        rs9530333       C       T       .       PASS    AA=T;DP=140     GT:GQ:DP        1|0:100:35      1|1:93:31       1|1:100:73
+2      201181919       rs2470902       G       A       .       PASS    AA=A;DP=173     GT:GQ:DP        1|0:100:35      1|1:93:34       1|1:100:104
+16     51196735        rs4238749       C       A       .       PASS    AA=C;DP=111     GT:GQ:DP        1|0:100:35      1|1:99:33       1|1:100:39
+5      151341927       .       T       C       .       PASS    AA=t;DP=116     GT:GQ:DP        1|0:100:36      0|0:100:33      1|0:100:46
+10     2063344 .       T       C       .       PASS    AA=T;DP=130     GT:GQ:DP        1|0:100:36      0|0:100:33      1|0:100:59
+2      168734309       .       C       T       .       PASS    AA=C;DP=140     GT:GQ:DP        1|0:100:36      0|0:100:34      1|0:100:72
+20     47511644        rs34437921      C       T       .       PASS    AA=C;DP=170     GT:GQ:DP        1|0:100:36      0|0:100:35      1|0:100:88
+18     58452996        rs28594093      C       T       .       PASS    AA=C;DP=156     GT:GQ:DP        1|0:100:36      0|0:100:36      1|0:100:82
+2      69593218        rs6749509       C       T       .       PASS    AA=C;DP=165     GT:GQ:DP        1|0:100:36      0|0:100:36      1|0:100:95
+X      2594466 .       G       A       .       PASS    AA=.;DP=110     GT:GQ:DP        1|0:100:36      0|0:100:38      1|0:100:35
+3      109094288       rs9838740       G       A       .       PASS    AA=A;DP=132     GT:GQ:DP        1|0:100:36      0|0:100:38      1|0:100:57
+11     125508536       rs621381        C       T       .       PASS    AA=C;DP=154     GT:GQ:DP        1|0:100:36      0|0:100:40      1|0:100:77
+3      144098804       .       A       C       .       PASS    AA=A;DP=166     GT:GQ:DP        1|0:100:36      0|0:100:41      1|0:100:39
+2      177821896       .       C       T       .       PASS    AA=C;DP=112     GT:GQ:DP        1|0:100:36      0|0:26:13       1|0:100:62
+5      160538896       rs1644450       C       T       .       PASS    AA=c;DP=107     GT:GQ:DP        1|0:100:36      0|0:29:20       1|0:100:50
+5      139020013       rs616529        G       C       .       PASS    AA=C;DP=100     GT:GQ:DP        1|0:100:36      0|0:35:11       1|0:100:42
+4      103921223       rs10034220      A       G       .       PASS    AA=A;DP=111     GT:GQ:DP        1|0:100:36      0|0:35:11       1|0:100:64
+2      234397615       .       C       T       .       PASS    AA=.;DP=127     GT:GQ:DP        1|0:100:36      0|0:35:16       1|0:100:76
+20     31356671        rs17124577      G       A       .       PASS    AA=G;DP=128     GT:GQ:DP        1|0:100:36      0|0:35:19       1|0:100:75
+4      57396372        rs62308064      T       C       .       PASS    AA=t;DP=127     GT:GQ:DP        1|0:100:36      0|0:38:14       1|0:100:73
+8      109713353       rs3019388       A       C       .       PASS    AA=A;DP=128     GT:GQ:DP        1|0:100:36      0|0:38:23       1|0:100:67
+19     19714604        rs10405054      A       G       .       PASS    AA=A;DP=140     GT:GQ:DP        1|0:100:36      0|0:40:19       1|0:100:82
+10     96623831        rs7909710       C       T       .       PASS    AA=C;DP=125     GT:GQ:DP        1|0:100:36      0|0:40:24       1|0:100:56
+3      133995533       rs9865373       C       G       .       PASS    AA=G;DP=138     GT:GQ:DP        1|0:100:36      0|0:40:24       1|0:100:78
+10     134162847       rs35133675      C       T       .       PASS    AA=C;DP=103     GT:GQ:DP        1|0:100:36      0|0:41:13       1|0:100:55
+11     72574446        rs60501960      G       C       .       PASS    AA=G;DP=146     GT:GQ:DP        1|0:100:36      0|0:41:13       1|0:100:94
+4      171295097       rs35861222      G       T       .       PASS    AA=G;DP=139     GT:GQ:DP        1|0:100:36      0|0:42:19       1|0:100:85
+3      13706935        rs60289385      A       C       .       PASS    AA=A;DP=128     GT:GQ:DP        1|0:100:36      0|0:43:25       1|0:100:54
+1      240658769       rs1553442       A       C       .       PASS    AA=A;DP=127;HM2 GT:GQ:DP        1|0:100:36      0|0:43:25       1|0:100:66
+13     107481194       rs9520738       C       T       .       PASS    AA=c;DP=101     GT:GQ:DP        1|0:100:36      0|0:44:14       1|0:100:51
+21     33583652        rs2843697       C       T       .       PASS    AA=c;DP=120     GT:GQ:DP        1|0:100:36      0|0:44:15       1|0:100:68
+X      1793138 rs1470876       G       T       .       PASS    AA=.;DP=86      GT:GQ:DP        1|0:100:36      0|0:47:15       1|0:100:31
+9      35882113        rs1475115       C       T       .       PASS    AA=C;DP=121     GT:GQ:DP        1|0:100:36      0|0:47:15       1|0:100:68
+12     50581706        rs7297198       C       T       .       PASS    AA=c;DP=120     GT:GQ:DP        1|0:100:36      0|0:47:16       1|0:100:68
+14     95221767        rs11627501      C       T       .       PASS    AA=C;DP=121     GT:GQ:DP        1|0:100:36      0|0:47:17       1|0:100:69
+22     28287570        rs1058642       G       A       .       PASS    AA=G;DP=140     GT:GQ:DP        1|0:100:36      0|0:47:17       1|0:100:69
+1      202007081       rs3820196       C       A       .       PASS    AA=C;DP=108     GT:GQ:DP        1|0:100:36      0|0:50:16       1|0:100:56
+11     64799448        .       A       G       .       PASS    AA=A;DP=121     GT:GQ:DP        1|0:100:36      0|0:50:16       1|0:100:69
+2      228175313       rs6714474       C       T       .       PASS    AA=T;DP=121     GT:GQ:DP        1|0:100:36      0|0:50:16       1|0:100:70
+1      11063993        .       T       C       .       PASS    AA=T;DP=135     GT:GQ:DP        1|0:100:36      0|0:50:17       1|0:100:83
+17     55609185        rs345176        A       G       .       PASS    AA=G;DP=118     GT:GQ:DP        1|0:100:36      0|0:50:23       1|0:100:43
+18     23500359        rs12454949      A       T       .       PASS    AA=A;DP=109     GT:GQ:DP        1|0:100:36      0|0:51:25       1|0:100:37
+15     87248207        .       G       C       .       PASS    AA=g;DP=120     GT:GQ:DP        1|0:100:36      0|0:53:17       1|0:100:68
+7      150292234       rs7789011       G       A       .       PASS    AA=G;DP=135     GT:GQ:DP        1|0:100:36      0|0:53:17       1|0:100:81
+1      62594163        .       G       A       .       PASS    AA=g;DP=139     GT:GQ:DP        1|0:100:36      0|0:53:17       1|0:100:83
+5      117954624       .       G       A       .       PASS    AA=G;DP=130     GT:GQ:DP        1|0:100:36      0|0:53:19       1|0:100:75
+7      44051917        .       A       G       .       PASS    AA=A;DP=153     GT:GQ:DP        1|0:100:36      0|0:53:27       1|0:100:90
+16     65924830        rs8052943       G       A       .       PASS    AA=g;DP=107     GT:GQ:DP        1|0:100:36      0|0:56:18       1|0:100:48
+5      168195987       rs61631925      A       G       .       PASS    AA=A;DP=119     GT:GQ:DP        1|0:100:36      0|0:56:18       1|0:100:67
+10     77708012        rs16933155      A       G       .       PASS    AA=A;DP=126     GT:GQ:DP        1|0:100:36      0|0:56:19       1|0:100:71
+7      44722636        .       T       C       .       PASS    AA=T;DP=119     GT:GQ:DP        1|0:100:36      0|0:59:19       1|0:100:67
+10     103845926       rs6584482       T       C       .       PASS    AA=T;DP=126     GT:GQ:DP        1|0:100:36      0|0:59:19       1|0:100:72
+1      51161371        .       A       G       .       PASS    AA=A;DP=142     GT:GQ:DP        1|0:100:36      0|0:59:19       1|0:100:87
+9      37809522        rs60884550      T       C       .       PASS    AA=T;DP=133     GT:GQ:DP        1|0:100:36      0|0:59:27       1|0:100:66
+11     112036622       .       G       T       .       PASS    AA=G;DP=141     GT:GQ:DP        1|0:100:36      0|0:60:31       1|0:100:74
+4      83407973        .       A       G       .       PASS    AA=A;DP=128     GT:GQ:DP        1|0:100:36      0|0:62:20       1|0:100:74
+20     56673855        rs6026436       A       T       .       PASS    AA=A;DP=147     GT:GQ:DP        1|0:100:36      0|0:62:20       1|0:100:81
+18     18203930        .       G       A       .       PASS    AA=G;DP=154     GT:GQ:DP        1|0:100:36      0|0:62:21       1|0:100:55
+1      21892781        rs17457434      G       A       .       PASS    AA=G;DP=129;HM2;HM3     GT:GQ:DP        1|0:100:36      0|0:62:23       1|0:100:72
+3      61997874        rs11708069      C       A       .       PASS    AA=A;DP=136     GT:GQ:DP        1|0:100:36      0|0:62:26       1|0:100:74
+20     37902962        rs736314        T       C       .       PASS    AA=T;DP=124     GT:GQ:DP        1|0:100:36      0|0:65:21       1|0:100:69
+2      179866169       rs13020508      C       T       .       PASS    AA=C;DP=116     GT:GQ:DP        1|0:100:36      0|0:65:22       1|0:100:58
+16     67375746        rs7199991       T       G       .       PASS    AA=G;DP=123     GT:GQ:DP        1|0:100:36      0|0:65:22       1|0:100:65
+14     53954822        rs4251668       T       C       .       PASS    AA=t;DP=125     GT:GQ:DP        1|0:100:36      0|0:65:22       1|0:100:67
+2      191161263       rs13003362      G       A       .       PASS    AA=G;DP=136     GT:GQ:DP        1|0:100:36      0|0:65:22       1|0:100:71
+12     119535339       rs7970406       G       A       .       PASS    AA=G;DP=143     GT:GQ:DP        1|0:100:36      0|0:65:22       1|0:100:86
+6      106543487       .       A       G       .       PASS    AA=A;DP=143     GT:GQ:DP        1|0:100:36      0|0:65:24       1|0:100:72
+12     116629339       rs7973518       A       G       .       PASS    AA=A;DP=121     GT:GQ:DP        1|0:100:36      0|0:68:22       1|0:100:64
+1      228811901       rs1359865       A       C       .       PASS    AA=A;DP=137;HM2;HM3     GT:GQ:DP        1|0:100:36      0|0:68:22       1|0:100:68
+3      87057529        rs58320464      C       T       .       PASS    AA=C;DP=129     GT:GQ:DP        1|0:100:36      0|0:68:22       1|0:100:70
+1      58282344        rs4912178       C       A       .       PASS    AA=A;DP=121     GT:GQ:DP        1|0:100:36      0|0:68:23       1|0:100:63
+21     22375803        rs61535639      C       T       .       PASS    AA=C;DP=129     GT:GQ:DP        1|0:100:36      0|0:68:23       1|0:100:67
+1      58892695        rs4553223       C       T       .       PASS    AA=C;DP=121     GT:GQ:DP        1|0:100:36      0|0:68:23       1|0:100:68
+4      25009130        .       A       G       .       PASS    AA=A;DP=128     GT:GQ:DP        1|0:100:36      0|0:68:26       1|0:100:66
+14     91736044        rs10135262      T       G       .       PASS    AA=T;DP=132     GT:GQ:DP        1|0:100:36      0|0:69:30       1|0:100:66
+2      53926704        rs13404007      T       C       .       PASS    AA=T;DP=124     GT:GQ:DP        1|0:100:36      0|0:71:23       1|0:100:65
+21     33235012        .       C       T       .       PASS    AA=C;DP=144     GT:GQ:DP        1|0:100:36      0|0:71:23       1|0:100:87
+2      186343172       rs11902553      A       G       .       PASS    AA=A;DP=107     GT:GQ:DP        1|0:100:36      0|0:71:24       1|0:100:47
+8      54537835        .       C       T       .       PASS    AA=C;DP=123     GT:GQ:DP        1|0:100:36      0|0:71:24       1|0:100:64
+6      130649165       .       A       G       .       PASS    AA=A;DP=156     GT:GQ:DP        1|0:100:36      0|0:71:25       1|0:100:53
+3      59370126        rs9809759       G       T       .       PASS    AA=T;DP=145     GT:GQ:DP        1|0:100:36      0|0:71:26       1|0:100:81
+4      155039052       rs17030721      G       A       .       PASS    AA=G;DP=148     GT:GQ:DP        1|0:100:36      0|0:71:26       1|0:100:87
+12     64932087        rs12299022      T       G       .       PASS    AA=T;DP=154     GT:GQ:DP        1|0:100:36      0|0:71:30       1|0:100:47
+17     46093748        .       G       T       .       PASS    AA=G;DP=157     GT:GQ:DP        1|0:100:36      0|0:71:30       1|0:100:48
+X      321196  .       C       A       .       PASS    AA=.;DP=106     GT:GQ:DP        1|0:100:36      0|0:74:24       1|0:43:46
+1      220252592       rs12117316      C       T       .       PASS    AA=C;DP=94;HM2  GT:GQ:DP        1|0:100:36      0|0:74:25       1|0:100:23
+17     63864175        rs2041981       C       G       .       PASS    AA=C;DP=151     GT:GQ:DP        1|0:100:36      0|0:74:25       1|0:100:37
+6      98344436        .       C       G       .       PASS    AA=C;DP=136     GT:GQ:DP        1|0:100:36      0|0:74:25       1|0:100:76
+5      46059732        .       G       A       .       PASS    AA=.;DP=132     GT:GQ:DP        1|0:100:36      0|0:74:25       1|0:100:77
+9      123392758       .       C       T       .       PASS    AA=N;DP=144     GT:GQ:DP        1|0:100:36      0|0:74:25       1|0:100:78
+10     121835366       rs4752377       A       G       .       PASS    AA=G;DP=142     GT:GQ:DP        1|0:100:36      0|0:76:32       1|0:100:72
+1      245908736       rs1176012       T       C       .       PASS    AA=T;DP=145     GT:GQ:DP        1|0:100:36      0|0:76:34       1|0:100:77
+2      112166748       rs60946472      A       G       .       PASS    AA=A;DP=142     GT:GQ:DP        1|0:100:36      0|0:77:25       1|0:100:38
+11     112267650       rs1447474       C       T       .       PASS    AA=C;DP=119     GT:GQ:DP        1|0:100:36      0|0:77:25       1|0:100:59
+6      31544953        rs9267133       G       A       .       PASS    AA=N;DP=121     GT:GQ:DP        1|0:100:36      0|0:77:25       1|0:100:62
+2      201678781       .       A       G       .       PASS    AA=A;DP=131     GT:GQ:DP        1|0:100:36      0|0:77:25       1|0:100:71
+5      168516871       .       A       G       .       PASS    AA=A;DP=133     GT:GQ:DP        1|0:100:36      0|0:77:26       1|0:100:71
+4      114144307       rs6833846       A       G       .       PASS    AA=G;DP=145     GT:GQ:DP        1|0:100:36      0|0:78:33       1|0:100:77
+20     2547309 rs57292313      T       A       .       PASS    AA=T;DP=162     GT:GQ:DP        1|0:100:36      0|0:78:34       1|0:100:88
+17     10375650        rs3744565       T       C       .       PASS    AA=T;DP=151     GT:GQ:DP        1|0:100:36      0|0:80:26       1|0:100:49
+2      177229065       rs10167800      A       G       .       PASS    AA=A;DP=123     GT:GQ:DP        1|0:100:36      0|0:80:26       1|0:100:61
+4      184028919       rs56079040      A       G       .       PASS    AA=A;DP=129     GT:GQ:DP        1|0:100:36      0|0:80:26       1|0:100:69
+18     13404074        .       C       T       .       PASS    AA=C;DP=150     GT:GQ:DP        1|0:100:36      0|0:80:26       1|0:100:88
+14     93629242        .       A       G       .       PASS    AA=A;DP=113     GT:GQ:DP        1|0:100:36      0|0:80:27       1|0:100:49
+3      236467  .       T       C       .       PASS    AA=T;DP=112     GT:GQ:DP        1|0:100:36      0|0:80:27       1|0:100:50
+15     36847610        rs718562        C       T       .       PASS    AA=C;DP=146     GT:GQ:DP        1|0:100:36      0|0:82:36       1|0:100:32
+3      5624216 rs9824013       A       C       .       PASS    AA=C;DP=120     GT:GQ:DP        1|0:100:36      0|0:83:27       1|0:100:58
+2      220466660       .       C       T       .       PASS    AA=C;DP=138     GT:GQ:DP        1|0:100:36      0|0:83:27       1|0:100:76
+12     32299763        .       T       C       .       PASS    AA=T;DP=147     GT:GQ:DP        1|0:100:36      0|0:83:27       1|0:100:85
+4      23734116        rs16875069      T       C       .       PASS    AA=t;DP=151     GT:GQ:DP        1|0:100:36      0|0:83:27       1|0:100:94
+8      33178952        .       C       T       .       PASS    AA=C;DP=122     GT:GQ:DP        1|0:100:36      0|0:83:28       1|0:100:56
+12     118089264       rs9634173       T       A       .       PASS    AA=T;DP=167     GT:GQ:DP        1|0:100:36      0|0:83:28       1|0:100:58
+5      71738836        .       T       C       .       PASS    AA=T;DP=135     GT:GQ:DP        1|0:100:36      0|0:83:28       1|0:100:72
+6      42349490        .       C       T       .       PASS    AA=C;DP=135     GT:GQ:DP        1|0:100:36      0|0:86:28       1|0:100:59
+14     64155590        .       T       C       .       PASS    AA=T;DP=140     GT:GQ:DP        1|0:100:36      0|0:86:28       1|0:100:77
+8      53154577        rs7013920       T       C       .       PASS    AA=T;DP=147     GT:GQ:DP        1|0:100:36      0|0:86:28       1|0:100:88
+12     108566210       rs11067654      A       T       .       PASS    AA=A;DP=134     GT:GQ:DP        1|0:100:36      0|0:89:29       1|0:100:65
+12     47983991        rs60913663      A       G       .       PASS    AA=A;DP=139     GT:GQ:DP        1|0:100:36      0|0:89:29       1|0:100:74
+15     47431677        rs57252806      G       A       .       PASS    AA=G;DP=159     GT:GQ:DP        1|0:100:36      0|0:89:29       1|0:100:97
+11     70764602        rs12226382      A       G       .       PASS    AA=A;DP=133     GT:GQ:DP        1|0:100:36      0|0:89:30       1|0:100:69
+10     69852340        .       G       C       .       PASS    AA=G;DP=162     GT:GQ:DP        1|0:100:36      0|0:89:30       1|0:100:97
+16     6683661 .       A       G       .       PASS    AA=a;DP=166     GT:GQ:DP        1|0:100:36      0|0:92:30       1|0:100:103
+15     89963936        .       A       C       .       PASS    AA=A;DP=150     GT:GQ:DP        1|0:100:36      0|0:92:30       1|0:100:84
+3      103443013       rs59746039      A       G       .       PASS    AA=A;DP=157     GT:GQ:DP        1|0:100:36      0|0:92:31       1|0:100:48
+1      231691462       .       C       T       .       PASS    AA=C;DP=158     GT:GQ:DP        1|0:100:36      0|0:92:31       1|0:100:91
+5      102628923       .       T       C       .       PASS    AA=T;DP=147     GT:GQ:DP        1|0:100:36      0|0:92:32       1|0:100:77
+9      88682352        rs7861163       C       T       .       PASS    AA=C;DP=169     GT:GQ:DP        1|0:100:36      0|0:92:35       1|0:100:49
+21     38906996        rs35361275      A       G       .       PASS    AA=G;DP=151     GT:GQ:DP        1|0:100:36      0|0:95:31       1|0:100:46
+3      103526433       rs7636808       C       T       .       PASS    AA=c;DP=142     GT:GQ:DP        1|0:100:36      0|0:95:32       1|0:100:76
+22     19754944        rs6005506       A       G       .       PASS    AA=A;DP=149     GT:GQ:DP        1|0:100:36      0|0:95:32       1|0:100:81
+8      60794744        .       C       T       .       PASS    AA=t;DP=155     GT:GQ:DP        1|0:100:36      0|0:98:32       1|0:100:45
+10     120223874       .       G       A       .       PASS    AA=G;DP=133     GT:GQ:DP        1|0:100:36      0|0:98:32       1|0:100:64
+8      143361697       .       C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        1|0:100:36      0|0:9:11        1|0:100:72
+5      80917468        rs13354281      G       T       .       PASS    AA=G;DP=100     GT:GQ:DP        1|0:100:36      1|0:100:13      1|1:90:50
+22     39962919        rs6519247       C       G       .       PASS    AA=C;DP=146     GT:GQ:DP        1|0:100:36      1|0:100:17      1|1:100:92
+10     26787329        rs7096418       G       T       .       PASS    AA=G;DP=105     GT:GQ:DP        1|0:100:36      1|0:100:19      1|1:100:51
+6      19457151        rs1858519       T       C       .       PASS    AA=C;DP=125     GT:GQ:DP        1|0:100:36      1|0:100:20      1|1:100:67
+4      6698312 rs57159105      T       G       .       PASS    AA=T;DP=127     GT:GQ:DP        1|0:100:36      1|0:100:21      1|1:100:73
+9      127802003       rs4838305       T       C       .       PASS    AA=C;DP=130     GT:GQ:DP        1|0:100:36      1|0:100:21      1|1:100:73
+5      79651305        rs12659843      G       A       .       PASS    AA=G;DP=136     GT:GQ:DP        1|0:100:36      1|0:100:21      1|1:100:82
+8      1583489 rs6558504       A       G       .       PASS    AA=G;DP=124     GT:GQ:DP        1|0:100:36      1|0:100:22      1|1:100:64
+7      7405221 rs2109780       T       G       .       PASS    AA=T;DP=142     GT:GQ:DP        1|0:100:36      1|0:100:22      1|1:100:84
+9      85708616        rs12001918      T       C       .       PASS    AA=T;DP=126     GT:GQ:DP        1|0:100:36      1|0:100:23      1|1:100:68
+13     29517082        rs2368  C       T       .       PASS    AA=C;DP=147     GT:GQ:DP        1|0:100:36      1|0:100:23      1|1:100:92
+3      18679723        rs11128900      G       T       .       PASS    AA=G;DP=121     GT:GQ:DP        1|0:100:36      1|0:100:24      1|1:100:50
+10     133149678       rs6482890       A       G       .       PASS    AA=G;DP=129     GT:GQ:DP        1|0:100:36      1|0:100:24      1|1:100:72
+13     108825024       rs7328247       G       C       .       PASS    AA=C;DP=142     GT:GQ:DP        1|0:100:36      1|0:100:25      1|1:100:78
+8      21004770        rs898648        A       G       .       PASS    AA=G;DP=138     GT:GQ:DP        1|0:100:36      1|0:100:25      1|1:100:78
+7      138388744       rs11977775      G       A       .       PASS    AA=A;DP=123     GT:GQ:DP        1|0:100:36      1|0:100:27      1|1:100:64
+11     6490657 rs2723652       A       G       .       PASS    AA=G;DP=141     GT:GQ:DP        1|0:100:36      1|0:100:27      1|1:100:77
+21     29446605        rs2832220       G       A       .       PASS    AA=G;DP=142     GT:GQ:DP        1|0:100:36      1|0:100:27      1|1:100:81
+5      170219304       rs7717652       A       C       .       PASS    AA=A;DP=143     GT:GQ:DP        1|0:100:36      1|0:100:28      1|1:96:45
+11     57485874        rs7946468       C       T       .       PASS    AA=C;DP=156     GT:GQ:DP        1|0:100:36      1|0:100:29      1|1:100:38
+1      95971626        rs1931243       G       C       .       PASS    AA=G;DP=116;HM2 GT:GQ:DP        1|0:100:36      1|0:100:29      1|1:94:50
+10     127687405       rs3817307       T       G       .       PASS    AA=G;DP=133     GT:GQ:DP        1|0:100:36      1|0:100:30      1|1:100:69
+3      135916896       rs7620383       C       T       .       PASS    AA=C;DP=146     GT:GQ:DP        1|0:100:36      1|0:100:30      1|1:100:77
+3      22682980        rs9310702       T       C       .       PASS    AA=C;DP=144     GT:GQ:DP        1|0:100:36      1|0:100:30      1|1:100:78
+2      105714718       rs6543334       G       A       .       PASS    AA=G;DP=141     GT:GQ:DP        1|0:100:36      1|0:100:31      1|1:100:72
+2      159931456       rs3755430       G       C       .       PASS    AA=G;DP=156     GT:GQ:DP        1|0:100:36      1|0:100:31      1|1:100:91
+8      61351242        rs35552143      G       A       .       PASS    AA=g;DP=160     GT:GQ:DP        1|0:100:36      1|0:100:35      1|1:100:86
+2      114241663       rs4849274       G       A       .       PASS    AA=G;DP=152     GT:GQ:DP        1|0:100:36      1|0:100:38      1|1:100:77
+1      15829725        rs58004141      G       A       .       PASS    AA=g;DP=155     GT:GQ:DP        1|0:100:36      1|0:23:25       1|1:100:95
+20     13642028        rs12625704      C       T       .       PASS    AA=C;DP=102     GT:GQ:DP        1|0:100:36      1|0:40:16       1|1:99:42
+20     57152686        rs461588        G       A       .       PASS    AA=G;DP=132     GT:GQ:DP        1|0:100:36      1|0:40:19       1|1:100:79
+5      176945401       rs364970        C       T       .       PASS    AA=T;DP=108     GT:GQ:DP        1|0:100:36      1|0:78:18       1|1:69:51
+10     71484266        .       G       C       .       PASS    AA=G;DP=147     GT:GQ:DP        1|0:100:36      1|0:86:15       1|1:100:95
+2      143867631       rs7578553       C       A       .       PASS    AA=N;DP=109     GT:GQ:DP        1|0:100:36      1|0:87:19       1|1:94:49
+19     14717626        rs11881544      C       T       .       PASS    AA=c;DP=124     GT:GQ:DP        1|0:100:36      1|0:87:20       1|1:100:70
+1      110124578       rs61590757      G       A       .       PASS    AA=G;DP=113     GT:GQ:DP        1|0:100:36      1|0:94:15       1|1:100:62
+20     25019504        rs2207635       T       C       .       PASS    AA=C;DP=130     GT:GQ:DP        1|0:100:36      1|0:95:20       1|1:100:75
+3      123211536       rs2001212       G       A       .       PASS    AA=g;DP=127     GT:GQ:DP        1|0:100:36      1|1:15:19       1|1:100:69
+13     60152246        rs7991473       A       C       .       PASS    AA=C;DP=116     GT:GQ:DP        1|0:100:36      1|1:20:17       1|1:96:53
+2      9819507 rs6709608       C       T       .       PASS    AA=T;DP=120     GT:GQ:DP        1|0:100:36      1|1:21:15       1|1:100:66
+6      170303824       rs2291755       T       C       .       PASS    AA=t;DP=110     GT:GQ:DP        1|0:100:36      1|1:27:11       1|1:100:64
+1      51337441        .       G       A       .       PASS    AA=G;DP=118     GT:GQ:DP        1|0:100:36      1|1:33:11       1|1:100:73
+19     37416585        rs57989860      A       G       .       PASS    AA=A;DP=88      GT:GQ:DP        1|0:100:36      1|1:36:12       1|1:100:34
+9      4914875 rs1410006       A       C       .       PASS    AA=A;DP=109     GT:GQ:DP        1|0:100:36      1|1:36:12       1|1:100:63
+4      57220588        rs4864593       C       T       .       PASS    AA=C;DP=119     GT:GQ:DP        1|0:100:36      1|1:36:12       1|1:100:71
+4      38715747        rs2566102       C       G       .       PASS    AA=G;DP=112     GT:GQ:DP        1|0:100:36      1|1:39:13       1|1:100:63
+13     19912789        rs9550649       A       G       .       PASS    AA=A;DP=123     GT:GQ:DP        1|0:100:36      1|1:40:20       1|1:100:69
+17     48174371        rs11868113      G       A       .       PASS    AA=G;DP=124     GT:GQ:DP        1|0:100:36      1|1:41:23       1|1:100:66
+5      6505930 rs272470        G       C       .       PASS    AA=G;DP=106     GT:GQ:DP        1|0:100:36      1|1:42:15       1|1:100:56
+7      91220120        rs803284        G       T       .       PASS    AA=T;DP=111     GT:GQ:DP        1|0:100:36      1|1:45:15       1|1:100:51
+14     42417731        rs4906232       A       C       .       PASS    AA=A;DP=108     GT:GQ:DP        1|0:100:36      1|1:45:15       1|1:100:56
+12     11452624        rs7315699       T       C       .       PASS    AA=N;DP=123     GT:GQ:DP        1|0:100:36      1|1:52:33       1|1:100:42
+4      119272839       rs11098428      G       A       .       PASS    AA=G;DP=134     GT:GQ:DP        1|0:100:36      1|1:54:18       1|1:100:75
+1      183718447       rs6685999       A       G       .       PASS    AA=G;DP=151;HM2;HM3     GT:GQ:DP        1|0:100:36      1|1:54:19       1|1:100:53
+2      14983789        rs1568281       A       G       .       PASS    AA=G;DP=141     GT:GQ:DP        1|0:100:36      1|1:55:30       1|1:100:75
+2      64347123        rs2433388       T       A       .       PASS    AA=A;DP=146     GT:GQ:DP        1|0:100:36      1|1:55:30       1|1:100:81
+11     403330  rs7931467       G       A       .       PASS    AA=G;DP=121     GT:GQ:DP        1|0:100:36      1|1:57:19       1|1:100:56
+4      90513526        rs2869997       T       C       .       PASS    AA=T;DP=105     GT:GQ:DP        1|0:100:36      1|1:57:23       1|1:98:45
+10     23845835        rs1337325       C       T       .       PASS    AA=T;DP=119     GT:GQ:DP        1|0:100:36      1|1:60:20       1|1:100:63
+6      143701271       rs17072445      A       G       .       PASS    AA=G;DP=122     GT:GQ:DP        1|0:100:36      1|1:60:20       1|1:100:66
+13     58905528        rs4884336       G       A       .       PASS    AA=G;DP=126     GT:GQ:DP        1|0:100:36      1|1:63:21       1|1:100:65
+11     27663744        rs10835214      T       G       .       PASS    AA=G;DP=121     GT:GQ:DP        1|0:100:36      1|1:66:22       1|1:100:60
+6      144841867       rs4896725       C       T       .       PASS    AA=C;DP=107     GT:GQ:DP        1|0:100:36      1|1:66:23       1|1:100:49
+10     91556037        rs1324699       G       A       .       PASS    AA=G;DP=124     GT:GQ:DP        1|0:100:36      1|1:69:24       1|1:100:66
+12     24108376        rs12322111      G       A       .       PASS    AA=A;DP=140     GT:GQ:DP        1|0:100:36      1|1:69:26       1|1:100:78
+10     111411541       rs10749002      G       A       .       PASS    AA=A;DP=127     GT:GQ:DP        1|0:100:36      1|1:72:24       1|1:100:65
+15     91420041        rs12903384      G       A       .       PASS    AA=A;DP=127     GT:GQ:DP        1|0:100:36      1|1:75:26       1|1:100:63
+11     127236829       rs10790928      T       C       .       PASS    AA=C;DP=137     GT:GQ:DP        1|0:100:36      1|1:81:28       1|1:100:78
+18     69177259        rs1943796       A       G       .       PASS    AA=A;DP=131     GT:GQ:DP        1|0:100:36      1|1:84:28       1|1:100:65
+15     82474531        .       A       G       .       PASS    AA=A;DP=133     GT:GQ:DP        1|0:100:36      1|1:84:30       1|1:100:67
+17     62905794        rs2364972       A       G       .       PASS    AA=G;DP=141     GT:GQ:DP        1|0:100:36      1|1:84:30       1|1:100:74
+7      143356291       rs6948665       G       A       .       PASS    AA=G;DP=111     GT:GQ:DP        1|0:100:36      1|1:87:29       1|1:100:46
+6      36469660        rs2057351       G       A       .       PASS    AA=G;DP=147     GT:GQ:DP        1|0:100:36      1|1:87:30       1|1:100:38
+1      235538376       rs12164567      A       G       .       PASS    AA=G;DP=138     GT:GQ:DP        1|0:100:36      1|1:87:30       1|1:100:72
+2      156112706       rs1524912       T       C       .       PASS    AA=T;DP=140     GT:GQ:DP        1|0:100:36      1|1:87:30       1|1:100:75
+12     11600350        rs7954816       C       T       .       PASS    AA=T;DP=145     GT:GQ:DP        1|0:100:36      1|1:90:31       1|1:100:80
+15     51533461        rs8030357       G       T       .       PASS    AA=G;DP=143     GT:GQ:DP        1|0:100:36      1|1:96:32       1|1:100:62
+22     19541019        rs178065        T       C       .       PASS    AA=C;DP=115     GT:GQ:DP        1|0:100:36      1|1:9:16        1|1:100:61
+3      72214965        rs11710880      C       T       .       PASS    AA=T;DP=138     GT:GQ:DP        1|0:100:37      0|0:100:33      1|0:100:67
+2      148550834       rs6430286       G       A       .       PASS    AA=G;DP=163     GT:GQ:DP        1|0:100:37      0|0:100:33      1|0:100:94
+14     75992227        .       T       G       .       PASS    AA=T;DP=143     GT:GQ:DP        1|0:100:37      0|0:100:34      1|0:100:72
+8      132061170       .       T       C       .       PASS    AA=T;DP=142     GT:GQ:DP        1|0:100:37      0|0:100:34      1|0:100:74
+5      115362250       rs4921050       C       A       .       PASS    AA=C;DP=160     GT:GQ:DP        1|0:100:37      0|0:100:37      1|0:100:42
+1      177975573       rs4652452       A       G       .       PASS    AA=A;DP=135     GT:GQ:DP        1|0:100:37      0|0:100:37      1|0:100:63
+11     78812062        rs12361223      A       G       .       PASS    AA=A;DP=132     GT:GQ:DP        1|0:100:37      0|0:100:38      1|0:100:58
+6      30037017        rs6916499       T       A       .       PASS    AA=.;DP=155     GT:GQ:DP        1|0:100:37      0|0:100:39      1|0:100:81
+8      117300206       rs698739        A       C       .       PASS    AA=A;DP=160     GT:GQ:DP        1|0:100:37      0|0:100:39      1|0:100:86
+6      47085434        .       A       G       .       PASS    AA=A;DP=182     GT:GQ:DP        1|0:100:37      0|0:100:40      1|0:100:103
+6      43071149        .       C       T       .       PASS    AA=C;DP=125     GT:GQ:DP        1|0:100:37      0|0:18:16       1|0:100:73
+4      147095824       rs57507954      C       A       .       PASS    AA=C;DP=110     GT:GQ:DP        1|0:100:37      0|0:29:15       1|0:100:58
+7      4405656 rs56698226      A       G       .       PASS    AA=A;DP=131     GT:GQ:DP        1|0:100:37      0|0:29:19       1|0:100:78
+16     80869301        .       T       C       .       PASS    AA=C;DP=133     GT:GQ:DP        1|0:100:37      0|0:29:20       1|0:100:79
+11     61387545        .       T       C       .       PASS    AA=C;DP=109     GT:GQ:DP        1|0:100:37      0|0:38:12       1|0:100:56
+6      64170992        rs2800031       T       C       .       PASS    AA=t;DP=95      GT:GQ:DP        1|0:100:37      0|0:38:13       1|0:100:46
+5      143778020       .       A       G       .       PASS    AA=A;DP=139     GT:GQ:DP        1|0:100:37      0|0:39:17       1|0:100:83
+8      57220090        .       C       T       .       PASS    AA=C;DP=101     GT:GQ:DP        1|0:100:37      0|0:41:13       1|0:100:42
+20     49017180        rs2426218       A       G       .       PASS    AA=A;DP=86      GT:GQ:DP        1|0:100:37      0|0:44:14       1|0:100:22
+15     78891592        .       C       G       .       PASS    AA=C;DP=128     GT:GQ:DP        1|0:100:37      0|0:44:15       1|0:100:78
+14     22847747        .       A       G       .       PASS    AA=A;DP=145     GT:GQ:DP        1|0:100:37      0|0:44:15       1|0:100:90
+12     13070700        rs7963598       C       A       .       PASS    AA=A;DP=117     GT:GQ:DP        1|0:100:37      0|0:44:22       1|0:100:56
+3      28893660        .       G       T       .       PASS    AA=G;DP=135     GT:GQ:DP        1|0:100:37      0|0:44:22       1|0:100:74
+16     10217913        rs61708288      T       C       .       PASS    AA=G;DP=156     GT:GQ:DP        1|0:100:37      0|0:44:22       1|0:100:99
+11     127398771       rs12802045      A       G       .       PASS    AA=G;DP=147     GT:GQ:DP        1|0:100:37      0|0:46:26       1|0:100:84
+11     119009382       .       C       A       .       PASS    AA=C;DP=124     GT:GQ:DP        1|0:100:37      0|0:47:15       1|0:100:75
+20     46852956        .       T       C       .       PASS    AA=T;DP=128     GT:GQ:DP        1|0:100:37      0|0:47:15       1|0:100:75
+10     47138281        rs7894341       G       C       .       PASS    AA=.;DP=117     GT:GQ:DP        1|0:100:37      0|0:47:16       1|0:100:65
+7      150588179       rs11980970      G       A       .       PASS    AA=G;DP=123     GT:GQ:DP        1|0:100:37      0|0:47:18       1|0:100:66
+4      117325665       rs6856663       G       A       .       PASS    AA=A;DP=129     GT:GQ:DP        1|0:100:37      0|0:47:18       1|0:100:74
+3      4286299 rs13074934      C       T       .       PASS    AA=C;DP=141     GT:GQ:DP        1|0:100:37      0|0:49:24       1|0:100:44
+6      30978979        rs12206075      T       C       .       PASS    AA=t;DP=113     GT:GQ:DP        1|0:100:37      0|0:50:16       1|0:100:60
+13     25513516        rs10507356      G       A       .       PASS    AA=G;DP=126     GT:GQ:DP        1|0:100:37      0|0:50:16       1|0:100:74
+3      73557524        .       G       A       .       PASS    AA=G;DP=126     GT:GQ:DP        1|0:100:37      0|0:50:16       1|0:100:75
+7      23186489        .       G       C       .       PASS    AA=G;DP=165     GT:GQ:DP        1|0:100:37      0|0:50:17       1|0:100:56
+4      94826656        .       A       C       .       PASS    AA=A;DP=135     GT:GQ:DP        1|0:100:37      0|0:50:17       1|0:100:83
+4      174962104       .       G       T       .       PASS    AA=G;DP=132     GT:GQ:DP        1|0:100:37      0|0:50:27       1|0:100:70
+14     22438918        .       A       G       .       PASS    AA=A;DP=145     GT:GQ:DP        1|0:100:37      0|0:53:17       1|0:100:43
+13     27536860        .       G       A       .       PASS    AA=g;DP=111     GT:GQ:DP        1|0:100:37      0|0:53:17       1|0:100:55
+13     45153754        rs7326805       C       T       .       PASS    AA=C;DP=126     GT:GQ:DP        1|0:100:37      0|0:53:17       1|0:100:74
+7      157520594       .       G       A       .       PASS    AA=G;DP=137     GT:GQ:DP        1|0:100:37      0|0:54:24       1|0:100:78
+3      40207298        rs1631549       G       C       .       PASS    AA=G;DP=129     GT:GQ:DP        1|0:100:37      0|0:55:29       1|0:100:63
+3      125792799       rs59042049      C       T       .       PASS    AA=C;DP=151     GT:GQ:DP        1|0:100:37      0|0:55:29       1|0:100:88
+7      142187821       .       G       A       .       PASS    AA=G;DP=137     GT:GQ:DP        1|0:100:37      0|0:56:18       1|0:100:84
+7      16604682        .       A       G       .       PASS    AA=A;DP=147     GT:GQ:DP        1|0:100:37      0|0:56:19       1|0:100:47
+6      36159177        .       C       T       .       PASS    AA=T;DP=131     GT:GQ:DP        1|0:100:37      0|0:56:20       1|0:100:75
+3      150451574       .       A       C       .       PASS    AA=A;DP=155     GT:GQ:DP        1|0:100:37      0|0:57:30       1|0:100:43
+21     34544218        rs2834422       C       T       .       PASS    AA=c;DP=108     GT:GQ:DP        1|0:100:37      0|0:59:19       1|0:100:53
+19     9207599 rs1985937       C       G       .       PASS    AA=c;DP=122     GT:GQ:DP        1|0:100:37      0|0:59:20       1|0:100:65
+9      111731523       .       C       T       .       PASS    AA=C;DP=132     GT:GQ:DP        1|0:100:37      0|0:59:20       1|0:100:77
+20     62380352        rs6090104       T       C       .       PASS    AA=.;DP=144     GT:GQ:DP        1|0:100:37      0|0:59:20       1|0:100:86
+10     100238317       rs1252839       T       A       .       PASS    AA=T;DP=129     GT:GQ:DP        1|0:100:37      0|0:59:21       1|0:100:72
+21     25785792        .       G       A       .       PASS    AA=G;DP=134     GT:GQ:DP        1|0:100:37      0|0:59:21       1|0:100:76
+3      143519587       .       T       C       .       PASS    AA=T;DP=112     GT:GQ:DP        1|0:100:37      0|0:59:22       1|0:100:52
+6      166239781       rs61711217      A       G       .       PASS    AA=a;DP=124     GT:GQ:DP        1|0:100:37      0|0:62:20       1|0:100:67
+4      100556820       .       T       C       .       PASS    AA=C;DP=128     GT:GQ:DP        1|0:100:37      0|0:62:20       1|0:100:71
+21     31441575        .       C       T       .       PASS    AA=C;DP=136     GT:GQ:DP        1|0:100:37      0|0:62:20       1|0:100:79
+1      113643259       rs773586        G       A       .       PASS    AA=G;DP=106;HM2;HM3     GT:GQ:DP        1|0:100:37      0|0:62:21       1|0:100:49
+1      156030767       .       C       T       .       PASS    AA=C;DP=121     GT:GQ:DP        1|0:100:37      0|0:62:21       1|0:100:62
+20     46520977        rs61570060      G       A       .       PASS    AA=G;DP=154     GT:GQ:DP        1|0:100:37      0|0:62:21       1|0:100:95
+21     42637321        rs225331        G       A       .       PASS    AA=G;DP=135     GT:GQ:DP        1|0:100:37      0|0:62:23       1|0:100:70
+4      100781107       rs1491240       A       C       .       PASS    AA=A;DP=141     GT:GQ:DP        1|0:100:37      0|0:65:21       1|0:100:40
+5      155588280       rs12332466      T       C       .       PASS    AA=T;DP=129     GT:GQ:DP        1|0:100:37      0|0:65:21       1|0:100:73
+8      101921138       rs55640217      A       T       .       PASS    AA=A;DP=136     GT:GQ:DP        1|0:100:37      0|0:65:21       1|0:100:79
+14     98604953        .       G       A       .       PASS    AA=G;DP=119     GT:GQ:DP        1|0:100:37      0|0:65:23       1|0:100:59
+8      58559635        rs4464958       C       T       .       PASS    AA=C;DP=123     GT:GQ:DP        1|0:100:37      0|0:65:23       1|0:100:62
+16     81742548        rs7199493       A       G       .       PASS    AA=G;DP=131     GT:GQ:DP        1|0:100:37      0|0:65:24       1|0:100:70
+9      109081051       rs7036284       T       C       .       PASS    AA=C;DP=105     GT:GQ:DP        1|0:100:37      0|0:68:22       1|0:100:45
+4      84451659        .       A       G       .       PASS    AA=A;DP=116     GT:GQ:DP        1|0:100:37      0|0:68:22       1|0:100:57
+14     43731262        .       C       A       .       PASS    AA=C;DP=127     GT:GQ:DP        1|0:100:37      0|0:68:22       1|0:100:72
+2      932186  .       C       T       .       PASS    AA=C;DP=134     GT:GQ:DP        1|0:100:37      0|0:68:22       1|0:100:73
+11     94517901        rs10765710      G       A       .       PASS    AA=A;DP=138     GT:GQ:DP        1|0:100:37      0|0:68:22       1|0:100:80
+8      135270250       rs16905106      G       A       .       PASS    AA=G;DP=148     GT:GQ:DP        1|0:100:37      0|0:68:22       1|0:100:84
+15     35870393        rs2382028       A       G       .       PASS    AA=A;DP=143     GT:GQ:DP        1|0:100:37      0|0:68:22       1|0:100:86
+12     125865772       .       G       A       .       PASS    AA=G;DP=150     GT:GQ:DP        1|0:100:37      0|0:68:23       1|0:100:92
+3      161395735       rs6768667       G       A       .       PASS    AA=A;DP=130     GT:GQ:DP        1|0:100:37      0|0:70:30       1|0:100:63
+8      42086275        rs7017129       A       C       .       PASS    AA=a;DP=114     GT:GQ:DP        1|0:100:37      0|0:71:23       1|0:100:55
+8      23815687        rs28750311      T       G       .       PASS    AA=T;DP=125     GT:GQ:DP        1|0:100:37      0|0:71:23       1|0:100:66
+13     101103830       rs9585750       A       G       .       PASS    AA=A;DP=148     GT:GQ:DP        1|0:100:37      0|0:71:23       1|0:100:83
+20     25215301        rs910997        G       A       .       PASS    AA=A;DP=124     GT:GQ:DP        1|0:100:37      0|0:71:24       1|0:100:51
+11     33875539        .       A       G       .       PASS    AA=A;DP=151     GT:GQ:DP        1|0:100:37      0|0:71:24       1|0:100:91
+6      78258672        .       G       A       .       PASS    AA=G;DP=116     GT:GQ:DP        1|0:100:37      0|0:71:25       1|0:100:54
+12     107790792       rs7962996       C       G       .       PASS    AA=C;DP=135     GT:GQ:DP        1|0:100:37      0|0:71:25       1|0:100:77
+3      40596435        .       T       G       .       PASS    AA=T;DP=149     GT:GQ:DP        1|0:100:37      0|0:74:24       1|0:100:49
+4      120800600       .       T       C       .       PASS    AA=T;DP=123     GT:GQ:DP        1|0:100:37      0|0:74:24       1|0:100:63
+1      173392845       rs57143557      C       A       .       PASS    AA=C;DP=147     GT:GQ:DP        1|0:100:37      0|0:74:24       1|0:100:88
+9      2339046 rs1576715       G       A       .       PASS    AA=A;DP=147     GT:GQ:DP        1|0:100:37      0|0:74:25       1|0:100:44
+6      25214762        rs1923195       G       A       .       PASS    AA=G;DP=138     GT:GQ:DP        1|0:100:37      0|0:74:25       1|0:100:76
+5      152156016       rs56722299      A       G       .       PASS    AA=G;DP=115     GT:GQ:DP        1|0:100:37      0|0:77:25       1|0:100:53
+12     106607859       .       C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        1|0:100:37      0|0:77:25       1|0:100:54
+10     13707339        .       T       G       .       PASS    AA=T;DP=119     GT:GQ:DP        1|0:100:37      0|0:77:25       1|0:100:57
+8      128154662       rs11998124      C       T       .       PASS    AA=C;DP=136     GT:GQ:DP        1|0:100:37      0|0:77:25       1|0:100:73
+6      31566612        rs28470596      C       T       .       PASS    AA=N;DP=142     GT:GQ:DP        1|0:100:37      0|0:77:25       1|0:100:77
+2      192419507       rs35012125      C       G       .       PASS    AA=C;DP=135     GT:GQ:DP        1|0:100:37      0|0:77:26       1|0:100:59
+22     27545249        rs6005900       A       C       .       PASS    AA=A;DP=124     GT:GQ:DP        1|0:100:37      0|0:77:26       1|0:100:61
+5      4785036 .       T       C       .       PASS    AA=T;DP=135     GT:GQ:DP        1|0:100:37      0|0:77:26       1|0:100:72
+6      148639814       rs4077019       A       G       .       PASS    AA=A;DP=133     GT:GQ:DP        1|0:100:37      0|0:77:27       1|0:100:67
+9      139192941       rs28560209      T       C       .       PASS    AA=C;DP=117     GT:GQ:DP        1|0:100:37      0|0:7:12        1|0:100:64
+10     106739267       .       T       C       .       PASS    AA=T;DP=129     GT:GQ:DP        1|0:100:37      0|0:80:26       1|0:100:65
+6      89676246        .       C       T       .       PASS    AA=C;DP=136     GT:GQ:DP        1|0:100:37      0|0:80:26       1|0:100:74
+9      114914082       rs2039221       C       T       .       PASS    AA=c;DP=144     GT:GQ:DP        1|0:100:37      0|0:80:26       1|0:100:82
+10     66099970        rs7098104       C       G       .       PASS    AA=G;DP=130     GT:GQ:DP        1|0:100:37      0|0:80:27       1|0:100:43
+17     69564175        rs7406112       A       C       .       PASS    AA=C;DP=130     GT:GQ:DP        1|0:100:37      0|0:80:27       1|0:100:65
+21     38669125        .       C       T       .       PASS    AA=C;DP=141     GT:GQ:DP        1|0:100:37      0|0:80:27       1|0:100:76
+1      92598438        rs7512045       G       A       .       PASS    AA=G;DP=144;HM2;HM3     GT:GQ:DP        1|0:100:37      0|0:80:27       1|0:100:83
+5      90161445        .       A       G       .       PASS    AA=A;DP=125     GT:GQ:DP        1|0:100:37      0|0:80:29       1|0:100:60
+14     99080575        rs2092960       G       A       .       PASS    AA=G;DP=136     GT:GQ:DP        1|0:100:37      0|0:83:27       1|0:100:73
+10     7674327 rs871049        T       C       .       PASS    AA=t;DP=141     GT:GQ:DP        1|0:100:37      0|0:83:27       1|0:100:78
+3      154783886       .       G       A       .       PASS    AA=G;DP=121     GT:GQ:DP        1|0:100:37      0|0:83:28       1|0:100:59
+5      175714016       rs4482915       G       A       .       PASS    AA=G;DP=135     GT:GQ:DP        1|0:100:37      0|0:83:28       1|0:100:71
+4      99818189        rs1918742       G       C       .       PASS    AA=C;DP=135     GT:GQ:DP        1|0:100:37      0|0:83:28       1|0:100:74
+4      85452294        .       T       A       .       PASS    AA=T;DP=150     GT:GQ:DP        1|0:100:37      0|0:83:29       1|0:100:86
+19     46693921        rs10414658      C       T       .       PASS    AA=-;DP=159     GT:GQ:DP        1|0:100:37      0|0:83:29       1|0:100:97
+6      38234741        rs59684841      G       T       .       PASS    AA=G;DP=131     GT:GQ:DP        1|0:100:37      0|0:86:28       1|0:100:66
+8      100956928       .       T       C       .       PASS    AA=T;DP=132     GT:GQ:DP        1|0:100:37      0|0:86:29       1|0:100:69
+1      34922995        .       A       G       .       PASS    AA=A;DP=148     GT:GQ:DP        1|0:100:37      0|0:89:29       1|0:100:45
+8      37166431        .       T       C       .       PASS    AA=t;DP=122     GT:GQ:DP        1|0:100:37      0|0:89:29       1|0:100:56
+22     35767633        rs7285282       T       C       .       PASS    AA=T;DP=137     GT:GQ:DP        1|0:100:37      0|0:89:29       1|0:100:71
+5      32782304        rs3828586       A       G       .       PASS    AA=G;DP=133     GT:GQ:DP        1|0:100:37      0|0:89:30       1|0:100:67
+2      114176485       rs13405475      A       G       .       PASS    AA=G;DP=157     GT:GQ:DP        1|0:100:37      0|0:89:30       1|0:100:90
+8      142440044       rs10090104      G       A       .       PASS    AA=G;DP=109     GT:GQ:DP        1|0:100:37      0|0:8:9 1|0:100:54
+10     7641160 rs3814697       G       T       .       PASS    AA=T;DP=147     GT:GQ:DP        1|0:100:37      0|0:90:41       1|0:100:65
+3      26648190        rs28694000      G       A       .       PASS    AA=g;DP=126     GT:GQ:DP        1|0:100:37      0|0:92:30       1|0:100:62
+2      32871028        rs17012293      C       G       .       PASS    AA=C;DP=132     GT:GQ:DP        1|0:100:37      0|0:92:31       1|0:100:64
+6      19916021        rs34109983      G       A       .       PASS    AA=G;DP=149     GT:GQ:DP        1|0:100:37      0|0:92:31       1|0:100:80
+19     8861757 rs12985749      C       T       .       PASS    AA=-;DP=154     GT:GQ:DP        1|0:100:37      0|0:95:31       1|0:100:85
+6      101364634       rs56304435      A       G       .       PASS    AA=A;DP=151     GT:GQ:DP        1|0:100:37      0|0:95:33       1|0:100:43
+2      16979303        rs7606068       T       C       .       PASS    AA=T;DP=139     GT:GQ:DP        1|0:100:37      0|0:95:33       1|0:100:66
+15     50531468        rs1724586       T       C       .       PASS    AA=T;DP=124     GT:GQ:DP        1|0:100:37      0|0:98:32       1|0:100:41
+3      10333424        rs697230        G       A       .       PASS    AA=G;DP=159     GT:GQ:DP        1|0:100:37      0|0:98:34       1|0:100:88
+10     119522740       rs12253035      C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        1|0:100:37      1|0:100:13      1|1:100:64
+10     18673628        rs1277843       C       T       .       PASS    AA=T;DP=84      GT:GQ:DP        1|0:100:37      1|0:100:17      1|1:69:24
+1      165523092       rs266820        T       C       .       PASS    AA=C;DP=112;HM2;HM3     GT:GQ:DP        1|0:100:37      1|0:100:18      1|1:100:45
+3      4843200 rs1867000       T       C       .       PASS    AA=T;DP=116     GT:GQ:DP        1|0:100:37      1|0:100:18      1|1:100:60
+4      143235347       rs3775631       G       A       .       PASS    AA=G;DP=109     GT:GQ:DP        1|0:100:37      1|0:100:18      1|1:99:53
+1      26721899        rs4970466       G       A       .       PASS    AA=g;DP=151;HM2 GT:GQ:DP        1|0:100:37      1|0:100:19      1|1:100:49
+5      37430901        rs58442984      A       G       .       PASS    AA=A;DP=117     GT:GQ:DP        1|0:100:37      1|0:100:20      1|1:100:61
+17     47816391        .       G       A       .       PASS    AA=G;DP=125     GT:GQ:DP        1|0:100:37      1|0:100:20      1|1:100:69
+3      52084604        rs893056        G       A       .       PASS    AA=G;DP=137     GT:GQ:DP        1|0:100:37      1|0:100:20      1|1:100:78
+6      33163465        rs9277550       T       C       .       PASS    AA=N;DP=96      GT:GQ:DP        1|0:100:37      1|0:100:20      1|1:87:30
+8      64214498        .       A       G       .       PASS    AA=a;DP=104     GT:GQ:DP        1|0:100:37      1|0:100:21      1|1:100:36
+3      169004035       rs9858935       G       A       .       PASS    AA=A;DP=108     GT:GQ:DP        1|0:100:37      1|0:100:21      1|1:100:37
+1      109775326       .       C       T       .       PASS    AA=T;DP=123     GT:GQ:DP        1|0:100:37      1|0:100:21      1|1:100:64
+11     69132654        rs662123        T       C       .       PASS    AA=T;DP=122     GT:GQ:DP        1|0:100:37      1|0:100:22      1|1:100:66
+5      117142273       rs7701042       G       A       .       PASS    AA=A;DP=144     GT:GQ:DP        1|0:100:37      1|0:100:22      1|1:100:88
+8      38506548        rs2445022       C       T       .       PASS    AA=C;DP=112     GT:GQ:DP        1|0:100:37      1|0:100:23      1|1:100:51
+5      175073361       rs28516968      C       T       .       PASS    AA=.;DP=143     GT:GQ:DP        1|0:100:37      1|0:100:23      1|1:100:84
+18     31638599        rs4799815       G       T       .       PASS    AA=T;DP=124     GT:GQ:DP        1|0:100:37      1|0:100:23      1|1:85:58
+10     73010687        rs3998530       A       G       .       PASS    AA=A;DP=112     GT:GQ:DP        1|0:100:37      1|0:100:24      1|1:100:42
+15     87196997        rs11073816      C       A       .       PASS    AA=c;DP=136     GT:GQ:DP        1|0:100:37      1|0:100:24      1|1:100:75
+1      76275987        rs6703050       G       A       .       PASS    AA=A;DP=118;HM2 GT:GQ:DP        1|0:100:37      1|0:100:25      1|1:100:53
+9      127757551       rs10987058      C       A       .       PASS    AA=C;DP=132     GT:GQ:DP        1|0:100:37      1|0:100:25      1|1:100:73
+16     53812692        rs2001970       T       C       .       PASS    AA=T;DP=118     GT:GQ:DP        1|0:100:37      1|0:100:26      1|1:100:55
+1      228058069       rs60899225      G       A       .       PASS    AA=G;DP=143     GT:GQ:DP        1|0:100:37      1|0:100:26      1|1:100:79
+19     60804833        rs310460        C       A       .       PASS    AA=C;DP=119     GT:GQ:DP        1|0:100:37      1|0:100:30      1|1:100:45
+2      188569407       rs61388721      C       G       .       PASS    AA=C;DP=165     GT:GQ:DP        1|0:100:37      1|0:100:30      1|1:100:54
+5      88915903        rs7702020       A       G       .       PASS    AA=A;DP=125     GT:GQ:DP        1|0:100:37      1|0:100:31      1|1:100:57
+3      147240997       rs993521        T       G       .       PASS    AA=T;DP=133     GT:GQ:DP        1|0:100:37      1|0:100:34      1|1:100:65
+11     6282952 rs4758406       T       C       .       PASS    AA=C;DP=163     GT:GQ:DP        1|0:100:37      1|0:100:35      1|1:100:85
+3      128666817       rs7621040       C       T       .       PASS    AA=C;DP=118     GT:GQ:DP        1|0:100:37      1|0:27:12       1|1:100:56
+1      223684782       rs2066233       G       A       .       PASS    AA=G;DP=141;HM2;HM3     GT:GQ:DP        1|0:100:37      1|0:32:24       1|1:100:38
+10     126936211       .       C       T       .       PASS    AA=c;DP=109     GT:GQ:DP        1|0:100:37      1|0:51:16       1|1:100:47
+2      102127672       rs11883987      C       T       .       PASS    AA=T;DP=125     GT:GQ:DP        1|0:100:37      1|0:61:24       1|1:100:64
+10     43387428        rs7101356       G       A       .       PASS    AA=A;DP=118     GT:GQ:DP        1|0:100:37      1|0:62:20       1|1:100:65
+6      16266782        .       T       G       .       PASS    AA=G;DP=128     GT:GQ:DP        1|0:100:37      1|0:66:15       1|1:100:80
+17     29752736        rs212485        A       G       .       PASS    AA=G;DP=126     GT:GQ:DP        1|0:100:37      1|0:71:24       1|1:100:64
+10     66392394        .       C       T       .       PASS    AA=C;DP=123     GT:GQ:DP        1|0:100:37      1|0:74:19       1|1:100:64
+16     48143565        rs8061885       C       T       .       PASS    AA=T;DP=111     GT:GQ:DP        1|0:100:37      1|0:83:19       1|1:100:55
+2      237728961       rs13412913      C       A       .       PASS    AA=C;DP=135     GT:GQ:DP        1|0:100:37      1|0:85:10       1|1:100:46
+13     72813792        .       C       T       .       PASS    AA=C;DP=177     GT:GQ:DP        1|0:100:37      1|0:90:46       1|1:88:54
+1      235343646       rs12140458      C       A       .       PASS    AA=A;DP=137;HM2;HM3     GT:GQ:DP        1|0:100:37      1|0:96:19       1|1:100:42
+6      5586878 .       G       A       .       PASS    AA=G;DP=132     GT:GQ:DP        1|0:100:37      1|0:96:19       1|1:100:76
+2      84864382        rs57381267      T       C       .       PASS    AA=T;DP=156     GT:GQ:DP        1|0:100:37      1|1:100:34      1|1:100:87
+2      31247531        rs10172706      G       A       .       PASS    AA=A;DP=115     GT:GQ:DP        1|0:100:37      1|1:22:18       1|1:100:60
+17     42724788        rs4634  G       A       .       PASS    AA=G;DP=107     GT:GQ:DP        1|0:100:37      1|1:28:15       1|1:100:49
+6      30627830        rs2524221       G       C       .       PASS    AA=G;DP=119     GT:GQ:DP        1|0:100:37      1|1:30:15       1|1:100:67
+5      159844162       rs58747524      T       C       .       PASS    AA=C;DP=120     GT:GQ:DP        1|0:100:37      1|1:31:16       1|1:100:70
+12     128630207       rs155685        A       G       .       PASS    AA=G;DP=95      GT:GQ:DP        1|0:100:37      1|1:36:12       1|1:100:38
+10     102530404       rs17113450      C       G       .       PASS    AA=C;DP=151     GT:GQ:DP        1|0:100:37      1|1:36:12       1|1:100:48
+3      129197739       rs1549875       T       C       .       PASS    AA=T;DP=113     GT:GQ:DP        1|0:100:37      1|1:36:12       1|1:100:54
+1      41878817        rs10736421      G       A       .       PASS    AA=N;DP=142;HM2;HM3     GT:GQ:DP        1|0:100:37      1|1:41:19       1|1:100:86
+15     20459002        rs8032564       A       G       .       PASS    AA=A;DP=113     GT:GQ:DP        1|0:100:37      1|1:45:16       1|1:100:49
+15     43471087        rs1145077       G       T       .       PASS    AA=T;DP=137     GT:GQ:DP        1|0:100:37      1|1:48:16       1|1:100:85
+2      122858015       rs4848768       A       G       .       PASS    AA=A;DP=137     GT:GQ:DP        1|0:100:37      1|1:51:23       1|1:100:78
+17     12138646        rs2529723       G       A       .       PASS    AA=G;DP=140     GT:GQ:DP        1|0:100:37      1|1:52:20       1|1:100:75
+7      19864410        rs10242620      G       T       .       PASS    AA=G;DP=127     GT:GQ:DP        1|0:100:37      1|1:52:25       1|1:100:64
+12     26695900        rs1466509       C       T       .       PASS    AA=T;DP=141     GT:GQ:DP        1|0:100:37      1|1:54:18       1|1:100:85
+2      117868214       rs2421939       G       A       .       PASS    AA=g;DP=102     GT:GQ:DP        1|0:100:37      1|1:57:19       1|1:100:48
+5      43612947        rs7713479       C       T       .       PASS    AA=C;DP=123     GT:GQ:DP        1|0:100:37      1|1:58:26       1|1:100:59
+11     75647397        rs4945056       T       C       .       PASS    AA=t;DP=132     GT:GQ:DP        1|0:100:37      1|1:60:23       1|1:100:73
+10     129731939       .       G       A       .       PASS    AA=A;DP=133     GT:GQ:DP        1|0:100:37      1|1:62:23       1|1:100:68
+3      99885688        .       C       T       .       PASS    AA=T;DP=134     GT:GQ:DP        1|0:100:37      1|1:63:23       1|1:100:75
+16     57932966        rs8048291       G       C       .       PASS    AA=g;DP=131     GT:GQ:DP        1|0:100:37      1|1:66:22       1|1:100:72
+2      220962858       rs4234032       G       C       .       PASS    AA=C;DP=114     GT:GQ:DP        1|0:100:37      1|1:66:22       1|1:92:57
+7      29431390        rs10264676      T       C       .       PASS    AA=C;DP=168     GT:GQ:DP        1|0:100:37      1|1:66:23       1|1:100:63
+19     54587362        rs7246233       C       G       .       PASS    AA=G;DP=152     GT:GQ:DP        1|0:100:37      1|1:69:23       1|1:100:93
+3      85347701        rs11127883      T       C       .       PASS    AA=C;DP=116     GT:GQ:DP        1|0:100:37      1|1:69:24       1|1:100:54
+11     34865642        rs2985392       C       T       .       PASS    AA=T;DP=123     GT:GQ:DP        1|0:100:37      1|1:72:25       1|1:100:41
+5      122508160       rs374621        G       A       .       PASS    AA=A;DP=119     GT:GQ:DP        1|0:100:37      1|1:75:26       1|1:100:57
+6      70440671        rs6455337       C       G       .       PASS    AA=G;DP=133     GT:GQ:DP        1|0:100:37      1|1:77:34       1|1:100:47
+3      142210101       rs13099706      A       C       .       PASS    AA=A;DP=134     GT:GQ:DP        1|0:100:37      1|1:78:29       1|1:100:65
+1      108532501       rs612994        C       T       .       PASS    AA=T;DP=123     GT:GQ:DP        1|0:100:37      1|1:81:27       1|1:100:59
+2      46072623        rs10084463      T       G       .       PASS    AA=G;DP=143     GT:GQ:DP        1|0:100:37      1|1:81:27       1|1:100:80
+4      113238616       rs10004030      A       G       .       PASS    AA=a;DP=149     GT:GQ:DP        1|0:100:37      1|1:87:30       1|1:100:82
+10     61471408        rs2393582       G       T       .       PASS    AA=T;DP=134     GT:GQ:DP        1|0:100:37      1|1:96:32       1|1:100:65
+20     313598  rs6107241       C       T       .       PASS    AA=t;DP=155     GT:GQ:DP        1|0:100:38      0|0:100:34      1|0:100:83
+4      14721222        .       C       T       .       PASS    AA=C;DP=158     GT:GQ:DP        1|0:100:38      0|0:100:34      1|0:100:85
+4      37369127        rs59774727      G       A       .       PASS    AA=G;DP=182     GT:GQ:DP        1|0:100:38      0|0:100:35      1|0:100:61
+15     35131946        rs57463051      T       C       .       PASS    AA=T;DP=150     GT:GQ:DP        1|0:100:38      0|0:100:35      1|0:100:77
+20     53783730        rs6024405       G       A       .       PASS    AA=G;DP=139     GT:GQ:DP        1|0:100:38      0|0:100:36      1|0:100:63
+14     32374960        rs12894833      C       G       .       PASS    AA=C;DP=144     GT:GQ:DP        1|0:100:38      0|0:100:36      1|0:100:70
+2      29694020        rs59884086      C       T       .       PASS    AA=C;DP=159     GT:GQ:DP        1|0:100:38      0|0:100:39      1|0:100:77
+10     134807250       rs7069109       G       A       .       PASS    AA=G;DP=110     GT:GQ:DP        1|0:100:38      0|0:12:15       1|0:100:58
+7      36955726        .       T       G       .       PASS    AA=T;DP=127     GT:GQ:DP        1|0:100:38      0|0:24:22       1|0:100:69
+10     133924516       rs35739010      A       G       .       PASS    AA=G;DP=106     GT:GQ:DP        1|0:100:38      0|0:29:9        1|0:100:53
+16     46346940        rs28448361      A       G       .       PASS    AA=A;DP=119     GT:GQ:DP        1|0:100:38      0|0:32:21       1|0:100:59
+4      8171566 rs4696763       G       A       .       PASS    AA=G;DP=131     GT:GQ:DP        1|0:100:38      0|0:34:18       1|0:100:72
+2      44962228        rs4953142       G       A       .       PASS    AA=G;DP=94      GT:GQ:DP        1|0:100:38      0|0:38:12       1|0:100:34
+19     51852241        rs4578773       A       C       .       PASS    AA=C;DP=130     GT:GQ:DP        1|0:100:38      0|0:38:13       1|0:100:79
+2      75713779        rs55963372      C       A       .       PASS    AA=A;DP=121     GT:GQ:DP        1|0:100:38      0|0:39:18       1|0:100:66
+12     91761115        .       A       G       .       PASS    AA=A;DP=119     GT:GQ:DP        1|0:100:38      0|0:40:24       1|0:100:44
+1      60115788        .       A       G       .       PASS    AA=A;DP=118     GT:GQ:DP        1|0:100:38      0|0:40:24       1|0:100:62
+1      224861148       rs1461920       A       G       .       PASS    AA=A;DP=126;HM2;HM3     GT:GQ:DP        1|0:100:38      0|0:41:13       1|0:100:72
+8      132966792       rs7015792       T       C       .       PASS    AA=T;DP=132     GT:GQ:DP        1|0:100:38      0|0:41:19       1|0:100:75
+9      24134081        .       A       G       .       PASS    AA=A;DP=136     GT:GQ:DP        1|0:100:38      0|0:41:22       1|0:100:77
+8      27286736        rs12679874      A       G       .       PASS    AA=G;DP=148     GT:GQ:DP        1|0:100:38      0|0:43:25       1|0:100:85
+6      169931851       rs3823466       G       A       .       PASS    AA=G;DP=147     GT:GQ:DP        1|0:100:38      0|0:44:15       1|0:100:95
+4      128996240       rs55798529      C       T       .       PASS    AA=C;DP=126     GT:GQ:DP        1|0:100:38      0|0:44:17       1|0:100:73
+1      19776640        rs58479749      G       C       .       PASS    AA=G;DP=115     GT:GQ:DP        1|0:100:38      0|0:47:16       1|0:100:60
+5      173131839       .       G       A       .       PASS    AA=G;DP=135     GT:GQ:DP        1|0:100:38      0|0:47:22       1|0:100:72
+5      177815590       rs2672820       A       G       .       PASS    AA=A;DP=134     GT:GQ:DP        1|0:100:38      0|0:47:22       1|0:100:74
+10     64694410        .       T       G       .       PASS    AA=T;DP=99      GT:GQ:DP        1|0:100:38      0|0:50:16       1|0:100:47
+11     58089122        .       G       A       .       PASS    AA=G;DP=115     GT:GQ:DP        1|0:100:38      0|0:53:17       1|0:100:63
+22     40016004        rs9623372       T       C       .       PASS    AA=T;DP=111     GT:GQ:DP        1|0:100:38      0|0:53:18       1|0:100:56
+10     80725721        .       G       C       .       PASS    AA=G;DP=129     GT:GQ:DP        1|0:100:38      0|0:53:18       1|0:100:72
+3      72721756        rs6782916       G       A       .       PASS    AA=A;DP=142     GT:GQ:DP        1|0:100:38      0|0:53:23       1|0:100:84
+9      115592441       rs16909454      T       C       .       PASS    AA=C;DP=145     GT:GQ:DP        1|0:100:38      0|0:55:25       1|0:100:78
+1      234567613       rs10925101      G       A       .       PASS    AA=G;DP=135;HM2 GT:GQ:DP        1|0:100:38      0|0:56:18       1|0:100:81
+12     130311738       rs57304175      C       T       .       PASS    AA=C;DP=139     GT:GQ:DP        1|0:100:38      0|0:56:18       1|0:100:84
+1      54927134        .       G       T       .       PASS    AA=G;DP=143     GT:GQ:DP        1|0:100:38      0|0:56:18       1|0:100:90
+1      201224121       rs57368092      T       G       .       PASS    AA=T;DP=144     GT:GQ:DP        1|0:100:38      0|0:56:18       1|0:100:92
+6      34003783        rs9469637       G       A       .       PASS    AA=G;DP=137     GT:GQ:DP        1|0:100:38      0|0:56:19       1|0:100:84
+16     85051349        rs11117503      G       A       .       PASS    AA=A;DP=128     GT:GQ:DP        1|0:100:38      0|0:59:19       1|0:100:72
+11     74833811        rs504685        T       C       .       PASS    AA=T;DP=143     GT:GQ:DP        1|0:100:38      0|0:62:20       1|0:100:44
+16     51947924        .       T       C       .       PASS    AA=T;DP=150     GT:GQ:DP        1|0:100:38      0|0:62:20       1|0:100:46
+11     4538445 rs12225750      G       A       .       PASS    AA=G;DP=108     GT:GQ:DP        1|0:100:38      0|0:62:20       1|0:100:50
+16     80637378        rs8049510       C       G       .       PASS    AA=C;DP=153     GT:GQ:DP        1|0:100:38      0|0:62:20       1|0:100:50
+14     68575039        .       T       A       .       PASS    AA=T;DP=128     GT:GQ:DP        1|0:100:38      0|0:62:21       1|0:100:69
+8      10527750        .       A       T       .       PASS    AA=A;DP=140     GT:GQ:DP        1|0:100:38      0|0:62:22       1|0:100:80
+16     84719168        rs28448276      C       A       .       PASS    AA=C;DP=118     GT:GQ:DP        1|0:100:38      0|0:62:26       1|0:100:53
+1      173755032       rs10912994      G       T       .       PASS    AA=G;DP=141;HM2;HM3     GT:GQ:DP        1|0:100:38      0|0:64:27       1|0:100:74
+2      207664095       rs16839154      T       C       .       PASS    AA=T;DP=147     GT:GQ:DP        1|0:100:38      0|0:65:21       1|0:100:41
+3      141432533       rs58535926      G       C       .       PASS    AA=G;DP=120     GT:GQ:DP        1|0:100:38      0|0:65:21       1|0:100:60
+13     29950068        .       A       G       .       PASS    AA=A;DP=120     GT:GQ:DP        1|0:100:38      0|0:65:21       1|0:100:61
+8      21483985        rs11774383      G       A       .       PASS    AA=G;DP=138     GT:GQ:DP        1|0:100:38      0|0:65:21       1|0:100:77
+16     78064916        rs56816037      C       T       .       PASS    AA=C;DP=147     GT:GQ:DP        1|0:100:38      0|0:65:21       1|0:100:88
+5      178414529       rs60746198      T       C       .       PASS    AA=T;DP=153     GT:GQ:DP        1|0:100:38      0|0:65:22       1|0:100:90
+19     59037416        rs7247357       T       A       .       PASS    AA=A;DP=133     GT:GQ:DP        1|0:100:38      0|0:68:22       1|0:100:33
+1      79034825        rs10747358      G       A       .       PASS    AA=A;DP=104     GT:GQ:DP        1|0:100:38      0|0:68:22       1|0:100:44
+19     63385509        rs13344679      T       C       .       PASS    AA=T;DP=141     GT:GQ:DP        1|0:100:38      0|0:68:22       1|0:100:66
+1      204792557       .       G       A       .       PASS    AA=g;DP=132     GT:GQ:DP        1|0:100:38      0|0:68:22       1|0:100:73
+10     61640278        rs57551335      G       A       .       PASS    AA=G;DP=147     GT:GQ:DP        1|0:100:38      0|0:68:23       1|0:100:86
+13     107454336       rs12431056      C       T       .       PASS    AA=C;DP=147     GT:GQ:DP        1|0:100:38      0|0:68:28       1|0:100:82
+10     70007596        rs12254515      T       G       .       PASS    AA=G;DP=127     GT:GQ:DP        1|0:100:38      0|0:69:28       1|0:100:62
+20     38697036        .       C       T       .       PASS    AA=C;DP=134     GT:GQ:DP        1|0:100:38      0|0:70:29       1|0:100:66
+2      233143462       .       A       G       .       PASS    AA=A;DP=145     GT:GQ:DP        1|0:100:38      0|0:71:23       1|0:100:43
+13     22427397        .       C       T       .       PASS    AA=C;DP=108     GT:GQ:DP        1|0:100:38      0|0:71:23       1|0:100:49
+5      2056335 rs61632088      C       G       .       PASS    AA=C;DP=129     GT:GQ:DP        1|0:100:38      0|0:71:23       1|0:100:68
+3      196374960       .       C       T       .       PASS    AA=T;DP=111     GT:GQ:DP        1|0:100:38      0|0:71:25       1|0:100:53
+12     3780749 .       A       T       .       PASS    AA=A;DP=119     GT:GQ:DP        1|0:100:38      0|0:74:24       1|0:100:47
+7      152313121       .       G       T       .       PASS    AA=g;DP=155     GT:GQ:DP        1|0:100:38      0|0:74:24       1|0:100:48
+19     39424603        .       G       A       .       PASS    AA=G;DP=121     GT:GQ:DP        1|0:100:38      0|0:74:24       1|0:100:58
+10     32187838        rs57313635      G       C       .       PASS    AA=G;DP=169     GT:GQ:DP        1|0:100:38      0|0:74:25       1|0:100:53
+14     67913942        rs12432583      A       T       .       PASS    AA=A;DP=149     GT:GQ:DP        1|0:100:38      0|0:74:25       1|0:100:86
+10     7331405 .       A       T       .       PASS    AA=A;DP=137     GT:GQ:DP        1|0:100:38      0|0:75:27       1|0:100:73
+10     113081674       .       C       A       .       PASS    AA=C;DP=153     GT:GQ:DP        1|0:100:38      0|0:76:32       1|0:100:83
+11     117309461       rs7107360       C       A       .       PASS    AA=C;DP=148     GT:GQ:DP        1|0:100:38      0|0:77:25       1|0:100:43
+14     92113131        rs7154653       T       C       .       PASS    AA=C;DP=120     GT:GQ:DP        1|0:100:38      0|0:77:25       1|0:100:54
+14     62998203        .       C       A       .       PASS    AA=C;DP=117     GT:GQ:DP        1|0:100:38      0|0:77:25       1|0:100:56
+5      54163547        rs4242046       T       A       .       PASS    AA=a;DP=127     GT:GQ:DP        1|0:100:38      0|0:79:28       1|0:100:61
+12     44939974        .       C       G       .       PASS    AA=C;DP=140     GT:GQ:DP        1|0:100:38      0|0:80:26       1|0:100:77
+6      134353964       rs17063242      C       G       .       PASS    AA=C;DP=143     GT:GQ:DP        1|0:100:38      0|0:80:27       1|0:100:78
+12     129306151       rs36029186      G       C       .       PASS    AA=G;DP=132     GT:GQ:DP        1|0:100:38      0|0:80:28       1|0:100:65
+4      175379555       .       T       C       .       PASS    AA=C;DP=131     GT:GQ:DP        1|0:100:38      0|0:80:32       1|0:100:60
+16     55542183        .       A       G       .       PASS    AA=A;DP=156     GT:GQ:DP        1|0:100:38      0|0:83:28       1|0:100:48
+21     19242100        .       C       G       .       PASS    AA=C;DP=132     GT:GQ:DP        1|0:100:38      0|0:83:29       1|0:100:66
+11     75089599        rs513917        C       T       .       PASS    AA=c;DP=139     GT:GQ:DP        1|0:100:38      0|0:83:29       1|0:100:71
+16     57072482        rs57271894      G       A       .       PASS    AA=G;DP=152     GT:GQ:DP        1|0:100:38      0|0:83:29       1|0:100:85
+15     30124824        .       G       A       .       PASS    AA=G;DP=144     GT:GQ:DP        1|0:100:38      0|0:86:29       1|0:100:34
+2      220775429       .       T       A       .       PASS    AA=T;DP=130     GT:GQ:DP        1|0:100:38      0|0:86:30       1|0:100:61
+2      43692020        .       T       G       .       PASS    AA=G;DP=150     GT:GQ:DP        1|0:100:38      0|0:89:30       1|0:100:85
+14     22309720        rs1957502       G       A       .       PASS    AA=A;DP=165     GT:GQ:DP        1|0:100:38      0|0:92:30       1|0:100:100
+12     44260166        rs11183118      G       A       .       PASS    AA=G;DP=133     GT:GQ:DP        1|0:100:38      0|0:92:30       1|0:100:66
+5      138575563       rs17131966      G       A       .       PASS    AA=g;DP=150     GT:GQ:DP        1|0:100:38      0|0:92:31       1|0:100:82
+4      37426622        rs17424009      G       A       .       PASS    AA=g;DP=162     GT:GQ:DP        1|0:100:38      0|0:94:37       1|0:100:79
+16     23229886        rs16940015      G       A       .       PASS    AA=g;DP=156     GT:GQ:DP        1|0:100:38      0|0:95:32       1|0:100:87
+12     69208717        .       A       G       .       PASS    AA=A;DP=150     GT:GQ:DP        1|0:100:38      0|0:95:33       1|0:100:73
+17     46475118        .       G       A       .       PASS    AA=G;DP=133     GT:GQ:DP        1|0:100:38      0|0:95:34       1|0:100:58
+11     93738579        rs4539284       C       T       .       PASS    AA=N;DP=142     GT:GQ:DP        1|0:100:38      0|0:98:33       1|0:100:47
+1      213600779       .       T       A       .       PASS    AA=A;DP=152     GT:GQ:DP        1|0:100:38      0|0:98:34       1|0:100:82
+11     30951609        rs158582        T       C       .       PASS    AA=C;DP=125     GT:GQ:DP        1|0:100:38      1|0:100:17      1|1:100:69
+3      86995978        rs9682134       C       T       .       PASS    AA=C;DP=132     GT:GQ:DP        1|0:100:38      1|0:100:18      1|1:100:74
+7      142004315       rs17264 G       C       .       PASS    AA=G;DP=111     GT:GQ:DP        1|0:100:38      1|0:100:19      1|1:100:54
+15     74186574        rs2955753       G       A       .       PASS    AA=A;DP=118     GT:GQ:DP        1|0:100:38      1|0:100:19      1|1:100:63
+5      11242453        rs28428902      T       A       .       PASS    AA=T;DP=131     GT:GQ:DP        1|0:100:38      1|0:100:20      1|1:100:58
+5      6581465 rs540027        T       C       .       PASS    AA=C;DP=124     GT:GQ:DP        1|0:100:38      1|0:100:20      1|1:100:66
+6      37218073        rs7751412       C       T       .       PASS    AA=T;DP=139     GT:GQ:DP        1|0:100:38      1|0:100:21      1|1:100:80
+20     24861729        rs227632        G       A       .       PASS    AA=A;DP=120     GT:GQ:DP        1|0:100:38      1|0:100:22      1|1:100:61
+15     67909220        rs4777202       A       G       .       PASS    AA=A;DP=138     GT:GQ:DP        1|0:100:38      1|0:100:23      1|1:100:76
+15     67804720        rs60947534      G       A       .       PASS    AA=G;DP=148     GT:GQ:DP        1|0:100:38      1|0:100:26      1|1:100:84
+12     4936487 rs10774292      G       A       .       PASS    AA=G;DP=143     GT:GQ:DP        1|0:100:38      1|0:100:27      1|1:100:79
+21     23314957        rs244268        A       G       .       PASS    AA=A;DP=132     GT:GQ:DP        1|0:100:38      1|0:100:28      1|1:100:66
+2      75910951        rs13428140      G       C       .       PASS    AA=G;DP=148     GT:GQ:DP        1|0:100:38      1|0:100:30      1|1:100:80
+3      53388613        rs752859        T       C       .       PASS    AA=C;DP=152     GT:GQ:DP        1|0:100:38      1|0:100:30      1|1:100:89
+11     28112894        rs1586173       C       T       .       PASS    AA=C;DP=134     GT:GQ:DP        1|0:100:38      1|0:100:31      1|1:100:64
+2      48927940        rs13002594      A       G       .       PASS    AA=A;DP=159     GT:GQ:DP        1|0:100:38      1|0:100:34      1|1:100:91
+6      135360547       rs4895439       A       T       .       PASS    AA=T;DP=155     GT:GQ:DP        1|0:100:38      1|0:100:35      1|1:100:85
+10     130077461       rs1981320       T       G       .       PASS    AA=G;DP=166     GT:GQ:DP        1|0:100:38      1|0:100:38      1|1:100:52
+18     71026356        rs1702831       C       A       .       PASS    AA=C;DP=102     GT:GQ:DP        1|0:100:38      1|0:35:13       1|1:79:39
+8      1327835 rs6558464       T       C       .       PASS    AA=T;DP=104     GT:GQ:DP        1|0:100:38      1|0:68:14       1|1:100:45
+13     94522363        rs1189462       C       T       .       PASS    AA=T;DP=123     GT:GQ:DP        1|0:100:38      1|0:81:22       1|1:100:62
+4      108633139       rs1989929       G       A       .       PASS    AA=G;DP=145     GT:GQ:DP        1|0:100:38      1|0:83:32       1|1:100:77
+11     6362909 rs58691424      C       T       .       PASS    AA=T;DP=129     GT:GQ:DP        1|0:100:38      1|0:86:15       1|1:100:78
+7      101455773       rs12534969      C       T       .       PASS    AA=C;DP=124     GT:GQ:DP        1|0:100:38      1|0:91:28       1|1:100:59
+3      104856401       rs12630575      C       T       .       PASS    AA=T;DP=122     GT:GQ:DP        1|0:100:38      1|0:96:19       1|1:100:67
+1      43382200        rs1198832       A       C       .       PASS    AA=C;DP=121;HM2 GT:GQ:DP        1|0:100:38      1|0:97:22       1|1:100:63
+3      118322296       rs9879200       A       G       .       PASS    AA=A;DP=138     GT:GQ:DP        1|0:100:38      1|1:100:34      1|1:100:66
+1      58344741        rs59081310      T       G       .       PASS    AA=G;DP=124     GT:GQ:DP        1|0:100:38      1|1:22:18       1|1:100:70
+12     116310460       rs10744894      G       A       .       PASS    AA=A;DP=149     GT:GQ:DP        1|0:100:38      1|1:31:19       1|1:100:93
+18     72894323        rs470769        C       T       .       PASS    AA=C;DP=107     GT:GQ:DP        1|0:100:38      1|1:33:19       1|1:100:39
+8      95225652        rs2514797       C       T       .       PASS    AA=T;DP=96      GT:GQ:DP        1|0:100:38      1|1:39:13       1|1:100:44
+18     866678  rs16952171      G       C       .       PASS    AA=C;DP=156     GT:GQ:DP        1|0:100:38      1|1:45:21       1|1:100:98
+1      231746754       rs780239        C       T       .       PASS    AA=T;DP=135;HM2;HM3     GT:GQ:DP        1|0:100:38      1|1:51:17       1|1:100:80
+3      125849163       rs1660029       A       G       .       PASS    AA=G;DP=130     GT:GQ:DP        1|0:100:38      1|1:51:18       1|1:100:62
+3      117618361       rs1619655       T       G       .       PASS    AA=G;DP=120     GT:GQ:DP        1|0:100:38      1|1:54:18       1|1:100:65
+4      79523250        rs10033307      T       G       .       PASS    AA=G;DP=122     GT:GQ:DP        1|0:100:38      1|1:54:19       1|1:100:66
+17     28916978        rs6505359       T       C       .       PASS    AA=C;DP=143     GT:GQ:DP        1|0:100:38      1|1:54:20       1|1:100:76
+3      134704767       rs16840489      T       A       .       PASS    AA=T;DP=170     GT:GQ:DP        1|0:100:38      1|1:60:27       1|1:100:107
+1      168546106       rs10919349      T       C       .       PASS    AA=T;DP=131;HM2;HM3     GT:GQ:DP        1|0:100:38      1|1:63:21       1|1:100:70
+18     13494354        rs9965287       C       T       .       PASS    AA=T;DP=135     GT:GQ:DP        1|0:100:38      1|1:65:26       1|1:100:71
+12     96875089        rs11109296      T       C       .       PASS    AA=T;DP=135     GT:GQ:DP        1|0:100:38      1|1:66:22       1|1:100:72
+17     11060625        rs1860177       T       A       .       PASS    AA=A;DP=108     GT:GQ:DP        1|0:100:38      1|1:66:23       1|1:100:51
+16     13879634        rs7200851       G       A       .       PASS    AA=A;DP=131     GT:GQ:DP        1|0:100:38      1|1:66:23       1|1:100:71
+6      156346546       rs4342437       G       A       .       PASS    AA=G;DP=132     GT:GQ:DP        1|0:100:38      1|1:67:29       1|1:100:67
+2      235537216       rs10178377      T       C       .       PASS    AA=C;DP=129     GT:GQ:DP        1|0:100:38      1|1:71:34       1|1:100:57
+8      121910337       rs10094256      C       T       .       PASS    AA=C;DP=131     GT:GQ:DP        1|0:100:38      1|1:72:24       1|1:100:69
+15     46551683        rs61364280      C       G       .       PASS    AA=G;DP=144     GT:GQ:DP        1|0:100:38      1|1:72:25       1|1:100:82
+9      4257093 rs6476832       C       T       .       PASS    AA=T;DP=145     GT:GQ:DP        1|0:100:38      1|1:75:26       1|1:94:43
+11     7994173 rs2280728       A       C       .       PASS    AA=A;DP=140     GT:GQ:DP        1|0:100:38      1|1:78:27       1|1:100:74
+6      11986062        rs9462203       A       C       .       PASS    AA=A;DP=138     GT:GQ:DP        1|0:100:38      1|1:81:27       1|1:100:73
+4      76520755        rs3898185       G       C       .       PASS    AA=G;DP=128     GT:GQ:DP        1|0:100:38      1|1:81:28       1|1:100:63
+4      83337866        rs11099527      G       A       .       PASS    AA=A;DP=134     GT:GQ:DP        1|0:100:38      1|1:81:28       1|1:100:70
+10     65338949        .       G       A       .       PASS    AA=A;DP=142     GT:GQ:DP        1|0:100:38      1|1:87:31       1|1:100:72
+5      59551600        rs1862614       T       A       .       PASS    AA=A;DP=155     GT:GQ:DP        1|0:100:38      1|1:87:31       1|1:100:88
+6      130912259       rs1203343       G       A       .       PASS    AA=A;DP=134     GT:GQ:DP        1|0:100:38      1|1:93:32       1|1:100:61
+3      14262707        rs10510427      G       A       .       PASS    AA=G;DP=156     GT:GQ:DP        1|0:100:39      0|0:100:34      1|0:100:81
+12     9110027 .       G       T       .       PASS    AA=G;DP=160     GT:GQ:DP        1|0:100:39      0|0:100:36      1|0:100:86
+8      15579933        .       G       C       .       PASS    AA=G;DP=152     GT:GQ:DP        1|0:100:39      0|0:100:38      1|0:100:77
+1      3811520 rs11589081      G       A       .       PASS    AA=G;DP=116     GT:GQ:DP        1|0:100:39      0|0:25:14       1|0:100:63
+1      10626215        rs729104        C       T       .       PASS    AA=C;DP=134;HM3 GT:GQ:DP        1|0:100:39      0|0:26:8        1|0:100:85
+16     75409409        .       G       C       .       PASS    AA=G;DP=110     GT:GQ:DP        1|0:100:39      0|0:29:10       1|0:100:61
+16     51321414        .       C       T       .       PASS    AA=C;DP=125     GT:GQ:DP        1|0:100:39      0|0:33:16       1|0:100:70
+6      89542756        rs55693280      G       T       .       PASS    AA=G;DP=110     GT:GQ:DP        1|0:100:39      0|0:34:19       1|0:100:55
+1      2838516 rs16823194      G       A       .       PASS    AA=g;DP=115;HM2 GT:GQ:DP        1|0:100:39      0|0:35:11       1|0:100:66
+19     53317604        rs3731014       G       A       .       PASS    AA=G;DP=126     GT:GQ:DP        1|0:100:39      0|0:35:12       1|0:100:75
+11     5738401 .       C       G       .       PASS    AA=c;DP=139     GT:GQ:DP        1|0:100:39      0|0:41:14       1|0:100:41
+14     100647040       .       G       A       .       PASS    AA=G;DP=137     GT:GQ:DP        1|0:100:39      0|0:44:14       1|0:100:84
+14     106103039       rs2919820       A       G       .       PASS    AA=a;DP=119     GT:GQ:DP        1|0:100:39      0|0:44:15       1|0:100:67
+20     61322144        .       G       A       .       PASS    AA=G;DP=128     GT:GQ:DP        1|0:100:39      0|0:47:15       1|0:100:73
+19     36780625        rs7251349       C       A       .       PASS    AA=c;DP=115     GT:GQ:DP        1|0:100:39      0|0:48:21       1|0:100:55
+16     72688086        .       T       C       .       PASS    AA=T;DP=106     GT:GQ:DP        1|0:100:39      0|0:50:16       1|0:100:52
+9      96439911        rs16937175      C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        1|0:100:39      0|0:50:17       1|0:100:65
+4      124314921       .       C       T       .       PASS    AA=C;DP=106     GT:GQ:DP        1|0:100:39      0|0:53:17       1|0:100:50
+20     43515485        rs6094142       C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        1|0:100:39      0|0:53:17       1|0:100:66
+3      64826664        rs2119764       T       C       .       PASS    AA=T;DP=110     GT:GQ:DP        1|0:100:39      0|0:53:18       1|0:100:50
+10     13110542        rs10906285      T       A       .       PASS    AA=T;DP=139     GT:GQ:DP        1|0:100:39      0|0:56:18       1|0:100:82
+2      11559304        rs6722279       T       G       .       PASS    AA=T;DP=119     GT:GQ:DP        1|0:100:39      0|0:59:19       1|0:100:63
+12     91040938        rs1013848       C       T       .       PASS    AA=C;DP=132     GT:GQ:DP        1|0:100:39      0|0:59:21       1|0:100:73
+10     14550647        .       C       T       .       PASS    AA=C;DP=132     GT:GQ:DP        1|0:100:39      0|0:59:21       1|0:100:75
+1      236361600       rs61328851      T       C       .       PASS    AA=T;DP=125     GT:GQ:DP        1|0:100:39      0|0:62:20       1|0:100:66
+12     51780655        rs17123172      G       A       .       PASS    AA=G;DP=129     GT:GQ:DP        1|0:100:39      0|0:62:20       1|0:100:71
+6      44739574        rs6899978       G       A       .       PASS    AA=G;DP=152     GT:GQ:DP        1|0:100:39      0|0:62:20       1|0:100:88
+6      10463676        .       C       T       .       PASS    AA=C;DP=150     GT:GQ:DP        1|0:100:39      0|0:62:21       1|0:100:49
+2      48969628        rs2110572       G       A       .       PASS    AA=A;DP=126     GT:GQ:DP        1|0:100:39      0|0:62:21       1|0:100:69
+2      96298231        rs62153033      T       C       .       PASS    AA=C;DP=151     GT:GQ:DP        1|0:100:39      0|0:62:22       1|0:100:94
+2      144952508       rs7598022       A       T       .       PASS    AA=T;DP=156     GT:GQ:DP        1|0:100:39      0|0:63:32       1|0:100:86
+5      147808828       rs58789597      G       A       .       PASS    AA=G;DP=122     GT:GQ:DP        1|0:100:39      0|0:65:21       1|0:100:59
+5      135357599       rs42257 T       G       .       PASS    AA=T;DP=126     GT:GQ:DP        1|0:100:39      0|0:65:21       1|0:100:67
+2      207290411       .       C       T       .       PASS    AA=C;DP=143     GT:GQ:DP        1|0:100:39      0|0:65:21       1|0:100:85
+21     41528020        rs9979662       T       A       .       PASS    AA=T;DP=137     GT:GQ:DP        1|0:100:39      0|0:65:23       1|0:100:75
+20     56816338        rs6100232       T       C       .       PASS    AA=T;DP=147     GT:GQ:DP        1|0:100:39      0|0:67:32       1|0:100:78
+6      167159379       rs61614610      G       A       .       PASS    AA=G;DP=148     GT:GQ:DP        1|0:100:39      0|0:68:22       1|0:100:47
+7      2881941 rs57925294      G       A       .       PASS    AA=G;DP=128     GT:GQ:DP        1|0:100:39      0|0:68:23       1|0:100:56
+18     6828290 rs6506447       T       C       .       PASS    AA=T;DP=131     GT:GQ:DP        1|0:100:39      0|0:68:23       1|0:100:68
+11     74725486        .       C       T       .       PASS    AA=c;DP=141     GT:GQ:DP        1|0:100:39      0|0:68:23       1|0:100:82
+3      54925235        rs6797854       T       A       .       PASS    AA=T;DP=156     GT:GQ:DP        1|0:100:39      0|0:68:23       1|0:100:89
+1      37191616        rs3845488       T       C       .       PASS    AA=T;DP=171;HM2 GT:GQ:DP        1|0:100:39      0|0:68:24       1|0:100:62
+3      31464933        .       A       G       .       PASS    AA=A;DP=119     GT:GQ:DP        1|0:100:39      0|0:71:23       1|0:100:59
+4      177326838       .       T       G       .       PASS    AA=T;DP=138     GT:GQ:DP        1|0:100:39      0|0:71:23       1|0:100:63
+1      153965656       rs57692591      G       T       .       PASS    AA=G;DP=137     GT:GQ:DP        1|0:100:39      0|0:71:30       1|0:100:69
+9      80307039        rs3010703       C       A       .       PASS    AA=A;DP=160     GT:GQ:DP        1|0:100:39      0|0:71:30       1|0:100:88
+2      139799547       rs344889        A       T       .       PASS    AA=T;DP=135     GT:GQ:DP        1|0:100:39      0|0:74:24       1|0:100:74
+5      144331494       rs31901 A       C       .       PASS    AA=C;DP=116     GT:GQ:DP        1|0:100:39      0|0:74:25       1|0:100:51
+16     51476136        rs11866911      A       T       .       PASS    AA=A;DP=129     GT:GQ:DP        1|0:100:39      0|0:74:25       1|0:100:66
+1      101632228       rs59362945      C       T       .       PASS    AA=C;DP=131     GT:GQ:DP        1|0:100:39      0|0:74:26       1|0:100:67
+10     13067680        .       T       C       .       PASS    AA=T;DP=148     GT:GQ:DP        1|0:100:39      0|0:74:30       1|0:100:84
+2      210127357       .       G       A       .       PASS    AA=G;DP=155     GT:GQ:DP        1|0:100:39      0|0:77:25       1|0:100:92
+15     84365583        .       T       A       .       PASS    AA=T;DP=127     GT:GQ:DP        1|0:100:39      0|0:77:26       1|0:100:64
+1      26269970        rs3008229       G       A       .       PASS    AA=G;DP=166;HM2 GT:GQ:DP        1|0:100:39      0|0:77:27       1|0:100:98
+16     61385628        rs1896766       C       T       .       PASS    AA=T;DP=129     GT:GQ:DP        1|0:100:39      0|0:78:33       1|0:100:58
+1      190821146       rs16834476      T       C       .       PASS    AA=T;DP=125;HM2 GT:GQ:DP        1|0:100:39      0|0:80:26       1|0:100:64
+12     129048936       rs1707919       T       G       .       PASS    AA=T;DP=140     GT:GQ:DP        1|0:100:39      0|0:80:26       1|0:100:76
+3      133317114       .       T       G       .       PASS    AA=T;DP=146     GT:GQ:DP        1|0:100:39      0|0:80:27       1|0:100:79
+11     93081326        rs7952659       C       G       .       PASS    AA=C;DP=137     GT:GQ:DP        1|0:100:39      0|0:80:28       1|0:100:71
+12     92855256        .       C       T       .       PASS    AA=C;DP=139     GT:GQ:DP        1|0:100:39      0|0:83:27       1|0:100:75
+13     110285445       .       C       T       .       PASS    AA=C;DP=141     GT:GQ:DP        1|0:100:39      0|0:83:27       1|0:100:77
+1      222754068       rs1891243       G       A       .       PASS    AA=g;DP=150;HM2 GT:GQ:DP        1|0:100:39      0|0:83:27       1|0:100:89
+13     26610093        rs7328829       A       T       .       PASS    AA=A;DP=122     GT:GQ:DP        1|0:100:39      0|0:83:28       1|0:100:43
+14     88995187        rs880536        T       C       .       PASS    AA=T;DP=136     GT:GQ:DP        1|0:100:39      0|0:86:28       1|0:100:70
+6      118642592       rs457210        C       T       .       PASS    AA=C;DP=154     GT:GQ:DP        1|0:100:39      0|0:89:29       1|0:100:81
+14     64014026        rs10131416      C       G       .       PASS    AA=C;DP=134     GT:GQ:DP        1|0:100:39      0|0:89:30       1|0:100:70
+15     66299787        rs61067194      C       G       .       PASS    AA=c;DP=152     GT:GQ:DP        1|0:100:39      0|0:89:30       1|0:100:83
+1      99294734        rs1456323       G       A       .       PASS    AA=G;DP=152;HM2 GT:GQ:DP        1|0:100:39      0|0:89:30       1|0:100:85
+1      47717893        rs881261        T       C       .       PASS    AA=t;DP=183;HM2;HM3     GT:GQ:DP        1|0:100:39      0|0:92:30       1|0:100:56
+2      113837845       .       C       T       .       PASS    AA=C;DP=172     GT:GQ:DP        1|0:100:39      0|0:92:30       1|0:100:61
+9      8683643 rs1434263       C       T       .       PASS    AA=C;DP=155     GT:GQ:DP        1|0:100:39      0|0:92:33       1|0:100:74
+3      132796970       .       T       C       .       PASS    AA=T;DP=159     GT:GQ:DP        1|0:100:39      0|0:95:32       1|0:100:48
+2      192494021       rs13410930      G       A       .       PASS    AA=A;DP=147     GT:GQ:DP        1|0:100:39      0|0:95:32       1|0:100:75
+4      170208283       .       G       C       .       PASS    AA=G;DP=152     GT:GQ:DP        1|0:100:39      0|0:95:33       1|0:100:82
+6      5238194 .       A       G       .       PASS    AA=A;DP=159     GT:GQ:DP        1|0:100:39      0|0:98:33       1|0:100:83
+12     21322475        .       G       C       .       PASS    AA=G;DP=120     GT:GQ:DP        1|0:100:39      1|0:100:14      1|1:100:68
+3      135307468       rs4450812       T       C       .       PASS    AA=C;DP=120     GT:GQ:DP        1|0:100:39      1|0:100:18      1|1:100:65
+3      55282144        rs458421        G       T       .       PASS    AA=G;DP=142     GT:GQ:DP        1|0:100:39      1|0:100:20      1|1:100:84
+11     56805802        rs4565915       T       C       .       PASS    AA=C;DP=121     GT:GQ:DP        1|0:100:39      1|0:100:21      1|1:100:61
+12     115102168       rs16946534      G       A       .       PASS    AA=g;DP=123     GT:GQ:DP        1|0:100:39      1|0:100:23      1|1:100:60
+1      48874036        rs319985        T       A       .       PASS    AA=T;DP=134;HM2;HM3     GT:GQ:DP        1|0:100:39      1|0:100:24      1|1:100:72
+4      77690942        rs12644803      G       A       .       PASS    AA=G;DP=119     GT:GQ:DP        1|0:100:39      1|0:100:25      1|1:60:54
+17     29428794        rs9892620       T       C       .       PASS    AA=T;DP=167     GT:GQ:DP        1|0:100:39      1|0:100:27      1|1:100:102
+14     72096401        rs60226136      G       C       .       PASS    AA=G;DP=142     GT:GQ:DP        1|0:100:39      1|0:100:27      1|1:100:36
+2      1251560 rs35272826      G       A       .       PASS    AA=G;DP=151     GT:GQ:DP        1|0:100:39      1|0:100:27      1|1:100:84
+1      31107204        rs57425019      C       T       .       PASS    AA=C;DP=129     GT:GQ:DP        1|0:100:39      1|0:100:28      1|1:100:62
+5      61968825        rs6449602       A       G       .       PASS    AA=A;DP=134     GT:GQ:DP        1|0:100:39      1|0:100:30      1|1:100:66
+20     6616654 rs6038579       T       C       .       PASS    AA=T;DP=161     GT:GQ:DP        1|0:100:39      1|0:100:42      1|1:100:84
+3      11553151        rs6442259       T       C       .       PASS    AA=C;DP=100     GT:GQ:DP        1|0:100:39      1|0:34:14       1|1:100:38
+6      3217108 rs9503517       C       T       .       PASS    AA=C;DP=136     GT:GQ:DP        1|0:100:39      1|0:43:19       1|1:100:80
+3      10450043        rs34855 C       T       .       PASS    AA=T;DP=130     GT:GQ:DP        1|0:100:39      1|0:59:21       1|1:100:72
+16     56357393        rs2965793       C       T       .       PASS    AA=C;DP=133     GT:GQ:DP        1|0:100:39      1|0:75:16       1|1:100:78
+18     661057  rs2853535       C       T       .       PASS    AA=T;DP=124     GT:GQ:DP        1|0:100:39      1|0:75:23       1|1:100:62
+4      17313765        rs1008894       C       T       .       PASS    AA=C;DP=113     GT:GQ:DP        1|0:100:39      1|0:81:22       1|1:100:52
+2      234744362       rs6431234       G       C       .       PASS    AA=C;DP=128     GT:GQ:DP        1|0:100:39      1|0:92:14       1|1:100:75
+3      10528635        rs7629412       C       A       .       PASS    AA=C;DP=147     GT:GQ:DP        1|0:100:39      1|0:93:28       1|1:100:82
+12     127641006       rs7316596       T       C       .       PASS    AA=t;DP=140     GT:GQ:DP        1|0:100:39      1|1:100:34      1|1:100:70
+14     63419821        rs8022917       T       C       .       PASS    AA=C;DP=109     GT:GQ:DP        1|0:100:39      1|1:11:14       1|1:100:55
+9      88155419        rs58091326      A       T       .       PASS    AA=A;DP=118     GT:GQ:DP        1|0:100:39      1|1:24:19       1|1:100:59
+3      114028996       rs4682119       C       A       .       PASS    AA=C;DP=147     GT:GQ:DP        1|0:100:39      1|1:24:24       1|1:100:85
+1      14331556        rs6689825       A       G       .       PASS    AA=G;DP=101;HM2 GT:GQ:DP        1|0:100:39      1|1:36:13       1|1:100:38
+1      112690145       rs11102461      G       A       .       PASS    AA=G;DP=136;HM2;HM3     GT:GQ:DP        1|0:100:39      1|1:36:23       1|1:100:73
+5      168987761       rs264860        T       C       .       PASS    AA=C;DP=112     GT:GQ:DP        1|0:100:39      1|1:36:24       1|1:100:39
+9      137198351       rs11103726      A       G       .       PASS    AA=G;DP=136     GT:GQ:DP        1|0:100:39      1|1:42:14       1|1:100:83
+1      208284936       rs227177        T       C       .       PASS    AA=C;DP=105;HM2 GT:GQ:DP        1|0:100:39      1|1:42:14       1|1:86:51
+1      108462439       rs661202        T       G       .       PASS    AA=G;DP=137;HM2;HM3     GT:GQ:DP        1|0:100:39      1|1:44:22       1|1:100:77
+18     12004411        rs643107        T       G       .       PASS    AA=G;DP=141     GT:GQ:DP        1|0:100:39      1|1:48:17       1|1:100:47
+6      16374023        .       C       T       .       PASS    AA=c;DP=120     GT:GQ:DP        1|0:100:39      1|1:51:17       1|1:100:65
+13     98502630        rs11069341      A       G       .       PASS    AA=G;DP=123     GT:GQ:DP        1|0:100:39      1|1:51:20       1|1:100:67
+2      241622962       rs2074822       G       A       .       PASS    AA=A;DP=116     GT:GQ:DP        1|0:100:39      1|1:54:19       1|1:100:57
+4      25237960        rs7675259       T       A       .       PASS    AA=A;DP=119     GT:GQ:DP        1|0:100:39      1|1:55:35       1|1:60:36
+6      36562201        rs2071811       A       T       .       PASS    AA=A;DP=133     GT:GQ:DP        1|0:100:39      1|1:57:19       1|1:100:76
+7      37419753        rs11765177      A       G       .       PASS    AA=A;DP=118     GT:GQ:DP        1|0:100:39      1|1:57:19       1|1:81:60
+19     54922851        rs56225415      C       T       .       PASS    AA=c;DP=122     GT:GQ:DP        1|0:100:39      1|1:57:20       1|1:100:63
+1      10893509        rs1280978       T       C       .       PASS    AA=C;DP=126;HM2 GT:GQ:DP        1|0:100:39      1|1:63:21       1|1:100:63
+15     91052636        rs8025293       C       T       .       PASS    AA=T;DP=136     GT:GQ:DP        1|0:100:39      1|1:63:21       1|1:100:74
+1      64586208        rs10158593      T       C       .       PASS    AA=C;DP=123     GT:GQ:DP        1|0:100:39      1|1:63:22       1|1:100:63
+1      161739792       rs7519814       A       G       .       PASS    AA=G;DP=152     GT:GQ:DP        1|0:100:39      1|1:69:24       1|1:100:46
+10     27982022        .       T       A       .       PASS    AA=T;DP=167     GT:GQ:DP        1|0:100:39      1|1:76:31       1|1:100:59
+3      15665029        rs2455853       G       A       .       PASS    AA=A;DP=163     GT:GQ:DP        1|0:100:39      1|1:84:29       1|1:100:96
+7      45518235        rs1525661       C       T       .       PASS    AA=C;DP=145     GT:GQ:DP        1|0:100:39      1|1:87:29       1|1:100:75
+10     119354878       rs181631        G       A       .       PASS    AA=G;DP=136     GT:GQ:DP        1|0:100:39      1|1:93:32       1|1:100:67
+15     23328258        rs2925237       C       T       .       PASS    AA=C;DP=144     GT:GQ:DP        1|0:100:40      0|0:100:33      1|0:100:69
+14     29941560        rs17096667      T       C       .       PASS    AA=t;DP=139     GT:GQ:DP        1|0:100:40      0|0:100:33      1|0:100:70
+13     65338328        .       A       G       .       PASS    AA=A;DP=157     GT:GQ:DP        1|0:100:40      0|0:100:33      1|0:100:84
+13     18401168        .       G       T       .       PASS    AA=g;DP=161     GT:GQ:DP        1|0:100:40      0|0:100:34      1|0:100:89
+6      164273501       rs7745642       G       A       .       PASS    AA=A;DP=165     GT:GQ:DP        1|0:100:40      0|0:100:37      1|0:100:88
+8      6653994 rs9314611       A       G       .       PASS    AA=G;DP=133     GT:GQ:DP        1|0:100:40      0|0:19:15       1|0:100:77
+20     55116506        rs60747402      C       T       .       PASS    AA=C;DP=112     GT:GQ:DP        1|0:100:40      0|0:26:19       1|0:100:51
+11     1457787 rs10835257      C       T       .       PASS    AA=C;DP=132     GT:GQ:DP        1|0:100:40      0|0:29:10       1|0:100:82
+15     57871945        rs6494146       A       T       .       PASS    AA=A;DP=112     GT:GQ:DP        1|0:100:40      0|0:29:9        1|0:100:64
+7      51149992        rs4947572       T       G       .       PASS    AA=T;DP=157     GT:GQ:DP        1|0:100:40      0|0:32:21       1|0:100:50
+2      213822902       .       A       T       .       PASS    AA=A;DP=112     GT:GQ:DP        1|0:100:40      0|0:36:22       1|0:100:51
+17     42677066        .       G       A       .       PASS    AA=G;DP=112     GT:GQ:DP        1|0:100:40      0|0:40:24       1|0:100:38
+4      38246993        .       A       G       .       PASS    AA=A;DP=129     GT:GQ:DP        1|0:100:40      0|0:40:24       1|0:100:62
+14     105303069       rs7149218       C       T       .       PASS    AA=C;DP=100     GT:GQ:DP        1|0:100:40      0|0:41:13       1|0:100:48
+5      119292880       .       G       A       .       PASS    AA=G;DP=106     GT:GQ:DP        1|0:100:40      0|0:41:14       1|0:100:50
+5      18292947        rs57317167      T       C       .       PASS    AA=T;DP=128     GT:GQ:DP        1|0:100:40      0|0:41:14       1|0:100:73
+3      86494217        rs1495889       G       A       .       PASS    AA=A;DP=153     GT:GQ:DP        1|0:100:40      0|0:42:25       1|0:100:90
+19     34928104        rs12610890      G       C       .       PASS    AA=G;DP=123     GT:GQ:DP        1|0:100:40      0|0:44:15       1|0:100:68
+9      21004628        rs12551341      T       C       .       PASS    AA=T;DP=135     GT:GQ:DP        1|0:100:40      0|0:44:16       1|0:100:76
+6      155582838       rs745537        G       T       .       PASS    AA=G;DP=156     GT:GQ:DP        1|0:100:40      0|0:47:30       1|0:100:84
+5      131735192       rs2631362       A       G       .       PASS    AA=A;DP=118     GT:GQ:DP        1|0:100:40      0|0:50:16       1|0:100:64
+18     75286904        .       G       A       .       PASS    AA=g;DP=151     GT:GQ:DP        1|0:100:40      0|0:50:16       1|0:76:46
+15     76988631        .       A       G       .       PASS    AA=A;DP=132     GT:GQ:DP        1|0:100:40      0|0:50:17       1|0:100:75
+7      98891250        rs13243267      G       C       .       PASS    AA=G;DP=146     GT:GQ:DP        1|0:100:40      0|0:50:19       1|0:100:43
+1      165919626       rs56169660      G       A       .       PASS    AA=G;DP=138     GT:GQ:DP        1|0:100:40      0|0:52:19       1|0:100:80
+12     59778653        rs10877546      T       C       .       PASS    AA=N;DP=154     GT:GQ:DP        1|0:100:40      0|0:52:28       1|0:100:73
+4      185219513       .       T       C       .       PASS    AA=T;DP=137     GT:GQ:DP        1|0:100:40      0|0:53:18       1|0:100:84
+17     53216839        rs57991126      G       T       .       PASS    AA=T;DP=146     GT:GQ:DP        1|0:100:40      0|0:55:29       1|0:100:77
+17     34622942        rs1859262       G       A       .       PASS    AA=G;DP=124     GT:GQ:DP        1|0:100:40      0|0:56:18       1|0:100:65
+8      132555177       rs4736475       T       C       .       PASS    AA=t;DP=136     GT:GQ:DP        1|0:100:40      0|0:56:19       1|0:100:75
+11     73583663        .       A       G       .       PASS    AA=A;DP=154     GT:GQ:DP        1|0:100:40      0|0:56:20       1|0:100:51
+1      221676242       rs999016        C       T       .       PASS    AA=C;DP=121;HM2;HM3     GT:GQ:DP        1|0:100:40      0|0:56:20       1|0:100:61
+14     43974918        .       T       A       .       PASS    AA=T;DP=143     GT:GQ:DP        1|0:100:40      0|0:57:30       1|0:100:73
+15     44578692        rs7182652       C       A       .       PASS    AA=C;DP=143     GT:GQ:DP        1|0:100:40      0|0:58:31       1|0:100:75
+12     129670097       rs7971314       G       A       .       PASS    AA=G;DP=141     GT:GQ:DP        1|0:100:40      0|0:59:19       1|0:100:79
+1      166319807       rs60117419      T       C       .       PASS    AA=T;DP=146     GT:GQ:DP        1|0:100:40      0|0:59:19       1|0:100:89
+8      22947831        .       G       T       .       PASS    AA=G;DP=117     GT:GQ:DP        1|0:100:40      0|0:59:20       1|0:100:58
+6      74385325        rs674482        T       C       .       PASS    AA=C;DP=114     GT:GQ:DP        1|0:100:40      0|0:5:10        1|0:100:61
+22     44764014        .       C       A       .       PASS    AA=C;DP=151     GT:GQ:DP        1|0:100:40      0|0:62:20       1|0:100:77
+16     8735662 .       A       G       .       PASS    AA=G;DP=131     GT:GQ:DP        1|0:100:40      0|0:65:21       1|0:100:72
+1      182090022       .       A       G       .       PASS    AA=A;DP=134     GT:GQ:DP        1|0:100:40      0|0:65:22       1|0:100:61
+7      25838046        rs6957970       G       A       .       PASS    AA=g;DP=157     GT:GQ:DP        1|0:100:40      0|0:65:22       1|0:100:91
+19     51173285        rs8110585       C       T       .       PASS    AA=N;DP=153     GT:GQ:DP        1|0:100:40      0|0:66:24       1|0:100:89
+14     67798870        .       C       T       .       PASS    AA=C;DP=121     GT:GQ:DP        1|0:100:40      0|0:68:22       1|0:100:62
+1      202189118       rs2810647       A       C       .       PASS    AA=C;DP=128;HM2;HM3     GT:GQ:DP        1|0:100:40      0|0:68:22       1|0:100:69
+10     125475903       rs12257950      C       T       .       PASS    AA=C;DP=139     GT:GQ:DP        1|0:100:40      0|0:68:22       1|0:100:78
+15     47159002        .       G       A       .       PASS    AA=G;DP=141     GT:GQ:DP        1|0:100:40      0|0:68:22       1|0:100:78
+10     31483165        .       G       A       .       PASS    AA=G;DP=115     GT:GQ:DP        1|0:100:40      0|0:68:23       1|0:100:51
+12     1106990 rs10082785      C       T       .       PASS    AA=c;DP=137     GT:GQ:DP        1|0:100:40      0|0:68:24       1|0:100:69
+19     6626334 rs1874072       G       A       .       PASS    AA=G;DP=149     GT:GQ:DP        1|0:100:40      0|0:71:23       1|0:100:45
+5      145441174       rs6881403       T       A       .       PASS    AA=T;DP=144     GT:GQ:DP        1|0:100:40      0|0:71:23       1|0:100:80
+3      105599743       rs60620368      A       G       .       PASS    AA=a;DP=147     GT:GQ:DP        1|0:100:40      0|0:71:24       1|0:100:76
+9      14508646        rs10756570      C       T       .       PASS    AA=T;DP=126     GT:GQ:DP        1|0:100:40      0|0:71:25       1|0:100:62
+19     46880533        rs58537416      A       G       .       PASS    AA=.;DP=158     GT:GQ:DP        1|0:100:40      0|0:74:24       1|0:100:39
+1      90765830        rs1361010       C       T       .       PASS    AA=C;DP=135;HM2;HM3     GT:GQ:DP        1|0:100:40      0|0:74:24       1|0:100:73
+3      140194477       .       A       G       .       PASS    AA=A;DP=139     GT:GQ:DP        1|0:100:40      0|0:74:24       1|0:100:75
+12     128008612       .       G       A       .       PASS    AA=G;DP=147     GT:GQ:DP        1|0:100:40      0|0:74:26       1|0:100:70
+2      38347814        rs12473527      G       A       .       PASS    AA=A;DP=123     GT:GQ:DP        1|0:100:40      0|0:77:25       1|0:100:59
+10     110707237       rs17778715      T       C       .       PASS    AA=T;DP=141     GT:GQ:DP        1|0:100:40      0|0:77:25       1|0:100:65
+6      83738908        .       T       C       .       PASS    AA=T;DP=139     GT:GQ:DP        1|0:100:40      0|0:77:25       1|0:100:78
+6      168944568       .       T       A       .       PASS    AA=T;DP=146     GT:GQ:DP        1|0:100:40      0|0:77:25       1|0:100:79
+21     42596705        .       T       C       .       PASS    AA=T;DP=158     GT:GQ:DP        1|0:100:40      0|0:77:25       1|0:100:93
+2      142373176       rs62155428      G       A       .       PASS    AA=G;DP=144     GT:GQ:DP        1|0:100:40      0|0:77:26       1|0:100:80
+7      29655293        .       T       C       .       PASS    AA=T;DP=158     GT:GQ:DP        1|0:100:40      0|0:77:31       1|0:100:84
+22     36416316        rs60072944      C       A       .       PASS    AA=C;DP=167     GT:GQ:DP        1|0:100:40      0|0:80:26       1|0:100:49
+2      67327624        rs6750381       A       G       .       PASS    AA=G;DP=156     GT:GQ:DP        1|0:100:40      0|0:80:26       1|0:100:91
+6      18178808        .       T       C       .       PASS    AA=T;DP=145     GT:GQ:DP        1|0:100:40      0|0:83:27       1|0:100:66
+1      233178943       .       C       T       .       PASS    AA=C;DP=141     GT:GQ:DP        1|0:100:40      0|0:83:27       1|0:100:76
+12     24337564        rs482146        G       A       .       PASS    AA=G;DP=118     GT:GQ:DP        1|0:100:40      0|0:83:28       1|0:100:50
+13     31901102        .       C       T       .       PASS    AA=C;DP=161     GT:GQ:DP        1|0:100:40      0|0:86:28       1|0:100:53
+11     78770756        rs542044        A       G       .       PASS    AA=A;DP=136     GT:GQ:DP        1|0:100:40      0|0:86:28       1|0:100:64
+5      58574115        .       A       G       .       PASS    AA=A;DP=150     GT:GQ:DP        1|0:100:40      0|0:86:28       1|0:100:73
+8      129632873       .       G       A       .       PASS    AA=G;DP=155     GT:GQ:DP        1|0:100:40      0|0:86:28       1|0:100:87
+21     19216427        rs438280        A       G       .       PASS    AA=A;DP=155     GT:GQ:DP        1|0:100:40      0|0:86:28       1|0:100:88
+20     18674500        .       T       A       .       PASS    AA=T;DP=157     GT:GQ:DP        1|0:100:40      0|0:89:29       1|0:100:48
+3      116795238       .       T       A       .       PASS    AA=T;DP=147     GT:GQ:DP        1|0:100:40      0|0:89:29       1|0:100:74
+7      139893363       rs1879901       A       G       .       PASS    AA=G;DP=159     GT:GQ:DP        1|0:100:40      0|0:92:31       1|0:100:87
+2      9309645 rs33969163      C       G       .       PASS    AA=-;DP=142     GT:GQ:DP        1|0:100:40      1|0:100:19      1|1:100:45
+7      68545878        rs6942588       T       C       .       PASS    AA=C;DP=120     GT:GQ:DP        1|0:100:40      1|0:100:21      1|1:100:60
+19     60603524        rs10408525      G       A       .       PASS    AA=G;DP=112     GT:GQ:DP        1|0:100:40      1|0:100:23      1|1:100:48
+12     62945537        .       A       G       .       PASS    AA=A;DP=143     GT:GQ:DP        1|0:100:40      1|0:100:23      1|1:100:81
+22     20891973        rs2040345       T       C       .       PASS    AA=.;DP=115     GT:GQ:DP        1|0:100:40      1|0:100:24      1|1:100:48
+18     72125407        rs62112978      A       G       .       PASS    AA=A;DP=151     GT:GQ:DP        1|0:100:40      1|0:100:25      1|1:100:86
+7      64589809        rs11763981      C       T       .       PASS    AA=.;DP=130     GT:GQ:DP        1|0:100:40      1|0:100:27      1|1:100:65
+1      179365761       rs7548465       C       G       .       PASS    AA=C;DP=134;HM2 GT:GQ:DP        1|0:100:40      1|0:100:27      1|1:100:67
+2      9246188 rs7582342       G       A       .       PASS    AA=A;DP=130     GT:GQ:DP        1|0:100:40      1|0:100:27      1|1:100:67
+11     123492341       rs61632268      C       T       .       PASS    AA=C;DP=138     GT:GQ:DP        1|0:100:40      1|0:100:27      1|1:100:73
+3      152630421       rs6771904       C       T       .       PASS    AA=C;DP=129     GT:GQ:DP        1|0:100:40      1|0:100:28      1|1:100:50
+7      47709959        rs7792551       G       A       .       PASS    AA=A;DP=143     GT:GQ:DP        1|0:100:40      1|0:100:29      1|1:100:75
+1      60195995        rs1426081       C       A       .       PASS    AA=A;DP=125;HM2 GT:GQ:DP        1|0:100:40      1|0:100:30      1|1:100:53
+10     87482315        rs10887521      G       A       .       PASS    AA=G;DP=148     GT:GQ:DP        1|0:100:40      1|0:100:30      1|1:100:65
+3      135462954       rs6792002       A       T       .       PASS    AA=A;DP=138     GT:GQ:DP        1|0:100:40      1|0:100:31      1|1:100:66
+14     61327356        rs10140578      G       A       .       PASS    AA=A;DP=133     GT:GQ:DP        1|0:100:40      1|0:100:32      1|1:100:50
+11     48695837        rs8186350       G       C       .       PASS    AA=.;DP=126     GT:GQ:DP        1|0:100:40      1|0:100:34      1|1:62:36
+2      230291576       rs12468714      A       T       .       PASS    AA=A;DP=145     GT:GQ:DP        1|0:100:40      1|0:100:35      1|1:100:71
+14     53064301        rs2251722       C       T       .       PASS    AA=c;DP=141     GT:GQ:DP        1|0:100:40      1|0:100:38      1|1:100:49
+2      28471779        .       C       A       .       PASS    AA=C;DP=133     GT:GQ:DP        1|0:100:40      1|0:97:15       1|1:100:79
+2      43387918        rs13390381      C       A       .       PASS    AA=g;DP=149     GT:GQ:DP        1|0:100:40      1|1:100:34      1|1:100:76
+17     16719047        rs6502526       G       A       .       PASS    AA=g;DP=156     GT:GQ:DP        1|0:100:40      1|1:21:11       1|1:100:52
+1      1050038 rs7556082       T       C       .       PASS    AA=t;DP=100;HM2 GT:GQ:DP        1|0:100:40      1|1:27:10       1|1:100:43
+11     10373356        rs10743137      G       A       .       PASS    AA=G;DP=154     GT:GQ:DP        1|0:100:40      1|1:30:34       1|1:100:83
+18     47178317        rs8087118       C       A       .       PASS    AA=A;DP=111     GT:GQ:DP        1|0:100:40      1|1:33:18       1|1:100:55
+11     57225725        rs1785499       T       G       .       PASS    AA=T;DP=119     GT:GQ:DP        1|0:100:40      1|1:36:18       1|1:100:61
+3      158851711       rs1488194       T       G       .       PASS    AA=G;DP=125     GT:GQ:DP        1|0:100:40      1|1:39:19       1|1:100:66
+11     85894333        rs623478        G       A       .       PASS    AA=A;DP=144     GT:GQ:DP        1|0:100:40      1|1:51:22       1|1:100:84
+7      77525552        rs10224805      C       T       .       PASS    AA=c;DP=110     GT:GQ:DP        1|0:100:40      1|1:54:18       1|1:100:53
+14     92298906        rs55894914      C       T       .       PASS    AA=C;DP=136     GT:GQ:DP        1|0:100:40      1|1:54:18       1|1:100:79
+10     63369901        rs7073837       A       C       .       PASS    AA=A;DP=146     GT:GQ:DP        1|0:100:40      1|1:55:29       1|1:100:76
+11     94914141        rs4753172       T       C       .       PASS    AA=C;DP=117     GT:GQ:DP        1|0:100:40      1|1:57:19       1|1:100:58
+18     3909900 rs8086199       A       G       .       PASS    AA=A;DP=155     GT:GQ:DP        1|0:100:40      1|1:60:21       1|1:100:87
+12     63207085        rs12302039      A       G       .       PASS    AA=G;DP=131     GT:GQ:DP        1|0:100:40      1|1:62:27       1|1:100:64
+8      67229334        rs9694082       C       G       .       PASS    AA=G;DP=140     GT:GQ:DP        1|0:100:40      1|1:63:21       1|1:100:66
+11     8354072 rs12270171      A       G       .       PASS    AA=G;DP=145     GT:GQ:DP        1|0:100:40      1|1:63:24       1|1:100:80
+6      41094601        rs9381025       C       T       .       PASS    AA=T;DP=132     GT:GQ:DP        1|0:100:40      1|1:66:22       1|1:100:70
+18     13925840        rs7236277       A       G       .       PASS    AA=N;DP=119     GT:GQ:DP        1|0:100:40      1|1:66:23       1|1:100:51
+9      99493044        rs3176659       T       C       .       PASS    AA=T;DP=133     GT:GQ:DP        1|0:100:40      1|1:69:25       1|1:100:68
+16     84626023        rs2030361       A       G       .       PASS    AA=G;DP=115     GT:GQ:DP        1|0:100:40      1|1:72:24       1|1:100:45
+13     98579481        rs2390192       G       A       .       PASS    AA=A;DP=127     GT:GQ:DP        1|0:100:40      1|1:72:25       1|1:100:62
+2      122968125       rs55809925      C       T       .       PASS    AA=C;DP=166     GT:GQ:DP        1|0:100:41      0|0:100:35      1|0:100:89
+20     43921606        rs1967656       T       C       .       PASS    AA=T;DP=178     GT:GQ:DP        1|0:100:41      0|0:100:36      1|0:100:103
+6      137923193       rs7775604       G       A       .       PASS    AA=G;DP=118     GT:GQ:DP        1|0:100:41      0|0:26:9        1|0:100:69
+11     48337184        .       C       T       .       PASS    AA=c;DP=153     GT:GQ:DP        1|0:100:41      0|0:29:27       1|0:100:46
+7      27112103        rs28649930      C       A       .       PASS    AA=C;DP=139     GT:GQ:DP        1|0:100:41      0|0:35:11       1|0:100:46
+2      69665573        rs6759804       C       T       .       PASS    AA=C;DP=146     GT:GQ:DP        1|0:100:41      0|0:35:11       1|0:100:51
+3      99540916        rs58991257      G       A       .       PASS    AA=G;DP=106     GT:GQ:DP        1|0:100:41      0|0:38:12       1|0:100:44
+1      247044281       rs55956627      A       G       .       PASS    AA=G;DP=157     GT:GQ:DP        1|0:100:41      0|0:43:25       1|0:100:91
+11     18826157        rs5019888       G       T       .       PASS    AA=G;DP=142     GT:GQ:DP        1|0:100:41      0|0:46:21       1|0:100:81
+10     47172521        rs11259796      C       T       .       PASS    AA=.;DP=134     GT:GQ:DP        1|0:100:41      0|0:47:15       1|0:100:80
+3      154020129       rs1585489       C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        1|0:100:41      0|0:52:22       1|0:100:58
+17     32260011        .       A       C       .       PASS    AA=A;DP=125     GT:GQ:DP        1|0:100:41      0|0:53:17       1|0:100:67
+2      26541826        rs58155484      C       T       .       PASS    AA=C;DP=135     GT:GQ:DP        1|0:100:41      0|0:53:17       1|0:100:80
+2      2947051 rs13415445      G       A       .       PASS    AA=g;DP=134     GT:GQ:DP        1|0:100:41      0|0:53:18       1|0:100:73
+8      98996875        rs12676720      C       T       .       PASS    AA=C;DP=118     GT:GQ:DP        1|0:100:41      0|0:56:19       1|0:100:60
+20     6411025 rs6117291       T       C       .       PASS    AA=T;DP=126     GT:GQ:DP        1|0:100:41      0|0:56:19       1|0:100:68
+8      145224883       rs34728076      T       C       .       PASS    AA=t;DP=133     GT:GQ:DP        1|0:100:41      0|0:56:20       1|0:100:48
+8      16490934        rs822227        C       T       .       PASS    AA=T;DP=109     GT:GQ:DP        1|0:100:41      0|0:59:19       1|0:100:48
+20     31093647        .       T       G       .       PASS    AA=T;DP=148     GT:GQ:DP        1|0:100:41      0|0:62:21       1|0:100:48
+1      202695908       rs2999485       A       G       .       PASS    AA=G;DP=169;HM2 GT:GQ:DP        1|0:100:41      0|0:62:21       1|0:100:55
+1      209956207       .       T       C       .       PASS    AA=C;DP=123     GT:GQ:DP        1|0:100:41      0|0:62:21       1|0:100:60
+2      176306929       .       A       G       .       PASS    AA=A;DP=145     GT:GQ:DP        1|0:100:41      0|0:62:21       1|0:100:81
+15     90529140        rs4778023       C       T       .       PASS    AA=C;DP=123     GT:GQ:DP        1|0:100:41      0|0:65:22       1|0:100:49
+22     35249340        rs7290521       G       A       .       PASS    AA=G;DP=132     GT:GQ:DP        1|0:100:41      0|0:68:22       1|0:100:69
+1      81720248        rs57614983      A       G       .       PASS    AA=A;DP=127     GT:GQ:DP        1|0:100:41      0|0:68:28       1|0:100:60
+1      114481833       rs41274114      G       A       .       PASS    AA=G;DP=130     GT:GQ:DP        1|0:100:41      0|0:71:23       1|0:100:67
+6      166561266       .       T       G       .       PASS    AA=T;DP=141     GT:GQ:DP        1|0:100:41      0|0:71:23       1|0:100:72
+1      99463011        rs61785074      G       A       .       PASS    AA=A;DP=152     GT:GQ:DP        1|0:100:41      0|0:71:24       1|0:100:88
+3      187471522       rs9942086       A       G       .       PASS    AA=A;DP=170     GT:GQ:DP        1|0:100:41      0|0:71:24       1|0:100:89
+1      58645656        rs56698784      T       A       .       PASS    AA=T;DP=179     GT:GQ:DP        1|0:100:41      0|0:74:25       1|0:100:59
+11     70728547        rs7106184       A       G       .       PASS    AA=A;DP=157     GT:GQ:DP        1|0:100:41      0|0:74:25       1|0:100:93
+18     46983628        .       A       G       .       PASS    AA=a;DP=131     GT:GQ:DP        1|0:100:41      0|0:74:26       1|0:100:59
+14     91116390        rs715864        G       T       .       PASS    AA=G;DP=175     GT:GQ:DP        1|0:100:41      0|0:77:25       1|0:100:53
+4      167255255       rs56118135      C       T       .       PASS    AA=C;DP=129     GT:GQ:DP        1|0:100:41      0|0:77:26       1|0:100:65
+1      166967218       .       A       G       .       PASS    AA=A;DP=134     GT:GQ:DP        1|0:100:41      0|0:77:26       1|0:100:71
+15     99793577        .       G       A       .       PASS    AA=g;DP=148     GT:GQ:DP        1|0:100:41      0|0:80:26       1|0:100:67
+10     65490804        rs2601701       A       G       .       PASS    AA=A;DP=142     GT:GQ:DP        1|0:100:41      0|0:80:26       1|0:100:76
+5      172962997       rs60279859      G       A       .       PASS    AA=G;DP=146     GT:GQ:DP        1|0:100:41      0|0:80:26       1|0:100:80
+12     91438521        rs1546608       T       G       .       PASS    AA=T;DP=146     GT:GQ:DP        1|0:100:41      0|0:80:27       1|0:100:74
+1      109542512       rs11102953      C       G       .       PASS    AA=.;DP=157;HM2 GT:GQ:DP        1|0:100:41      0|0:80:28       1|0:100:90
+3      11671719        rs9849441       C       T       .       PASS    AA=C;DP=143     GT:GQ:DP        1|0:100:41      0|0:83:27       1|0:100:73
+11     11131323        .       G       A       .       PASS    AA=G;DP=155     GT:GQ:DP        1|0:100:41      0|0:83:27       1|0:100:88
+7      116607523       rs38871 T       C       .       PASS    AA=C;DP=155     GT:GQ:DP        1|0:100:41      0|0:83:27       1|0:100:88
+3      88645023        .       C       T       .       PASS    AA=C;DP=128     GT:GQ:DP        1|0:100:41      0|0:83:29       1|0:100:59
+8      124777759       .       A       G       .       PASS    AA=A;DP=155     GT:GQ:DP        1|0:100:41      0|0:84:35       1|0:100:80
+8      123929384       rs16897544      C       T       .       PASS    AA=C;DP=148     GT:GQ:DP        1|0:100:41      0|0:86:28       1|0:100:79
+11     101165041       .       G       C       .       PASS    AA=G;DP=131     GT:GQ:DP        1|0:100:41      0|0:89:29       1|0:100:62
+1      114604608       rs60623862      C       T       .       PASS    AA=C;DP=139     GT:GQ:DP        1|0:100:41      0|0:89:29       1|0:100:66
+21     35404048        rs61038914      A       G       .       PASS    AA=A;DP=156     GT:GQ:DP        1|0:100:41      0|0:92:30       1|0:100:86
+10     33021144        .       G       A       .       PASS    AA=G;DP=144     GT:GQ:DP        1|0:100:41      0|0:92:37       1|0:100:69
+7      100405872       .       C       G       .       PASS    AA=C;DP=170     GT:GQ:DP        1|0:100:41      0|0:95:31       1|0:100:94
+8      66772103        rs4497004       A       G       .       PASS    AA=a;DP=153     GT:GQ:DP        1|0:100:41      0|0:95:33       1|0:100:80
+13     77301327        rs60536030      C       T       .       PASS    AA=C;DP=158     GT:GQ:DP        1|0:100:41      0|0:98:32       1|0:100:81
+1      149946065       rs1308152       T       C       .       PASS    AA=C;DP=132;HM2 GT:GQ:DP        1|0:100:41      1|0:100:17      1|1:100:74
+15     64212093        rs55993706      G       T       .       PASS    AA=G;DP=161     GT:GQ:DP        1|0:100:41      1|0:100:22      1|1:100:51
+15     61187398        rs2729789       G       A       .       PASS    AA=A;DP=141     GT:GQ:DP        1|0:100:41      1|0:100:24      1|1:100:76
+14     61617222        rs7148330       G       A       .       PASS    AA=G;DP=150     GT:GQ:DP        1|0:100:41      1|0:100:25      1|1:100:83
+13     102998566       rs993379        G       A       .       PASS    AA=A;DP=128     GT:GQ:DP        1|0:100:41      1|0:100:27      1|1:100:60
+12     68015053        rs317691        C       T       .       PASS    AA=C;DP=147     GT:GQ:DP        1|0:100:41      1|0:100:27      1|1:100:80
+8      39288556        rs58760180      A       G       .       PASS    AA=G;DP=128     GT:GQ:DP        1|0:100:41      1|0:100:28      1|1:100:58
+3      37556847        rs267540        G       A       .       PASS    AA=A;DP=130     GT:GQ:DP        1|0:100:41      1|0:100:29      1|1:100:59
+8      103056745       rs4734047       C       T       .       PASS    AA=C;DP=130     GT:GQ:DP        1|0:100:41      1|0:100:30      1|1:100:60
+14     60916063        .       T       C       .       PASS    AA=T;DP=155     GT:GQ:DP        1|0:100:41      1|0:100:30      1|1:100:82
+12     57240535        rs10732742      T       A       .       PASS    AA=T;DP=143     GT:GQ:DP        1|0:100:41      1|0:100:31      1|1:100:69
+14     70327159        rs12437037      A       G       .       PASS    AA=a;DP=147     GT:GQ:DP        1|0:100:41      1|0:100:32      1|1:100:73
+6      5500587 rs10484311      T       C       .       PASS    AA=T;DP=161     GT:GQ:DP        1|0:100:41      1|0:100:34      1|1:100:87
+22     47463468        rs130099        C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        1|0:100:41      1|0:53:15       1|1:100:65
+2      14457983        rs7594259       C       T       .       PASS    AA=C;DP=118     GT:GQ:DP        1|0:100:41      1|0:77:23       1|1:100:54
+13     22925943        rs9552967       A       G       .       PASS    AA=G;DP=143     GT:GQ:DP        1|0:100:41      1|0:93:29       1|1:100:71
+12     131374736       rs28551078      C       G       .       PASS    AA=C;DP=132     GT:GQ:DP        1|0:100:41      1|1:13:9        1|1:100:82
+5      32547761        rs1703329       C       G       .       PASS    AA=C;DP=129     GT:GQ:DP        1|0:100:41      1|1:48:16       1|1:100:73
+17     51596473        rs2110213       T       C       .       PASS    AA=C;DP=131     GT:GQ:DP        1|0:100:41      1|1:57:26       1|1:100:65
+1      119130901       rs2712270       A       G       .       PASS    AA=G;DP=131;HM2 GT:GQ:DP        1|0:100:41      1|1:63:22       1|1:100:71
+7      54525633        rs483483        A       G       .       PASS    AA=a;DP=124     GT:GQ:DP        1|0:100:41      1|1:63:24       1|1:100:49
+8      55256596        rs681000        C       T       .       PASS    AA=T;DP=130     GT:GQ:DP        1|0:100:41      1|1:63:28       1|1:100:65
+8      22819101        rs2457420       T       C       .       PASS    AA=C;DP=121     GT:GQ:DP        1|0:100:41      1|1:66:22       1|1:100:58
+16     65786520        rs3730399       A       G       .       PASS    AA=A;DP=148     GT:GQ:DP        1|0:100:41      1|1:66:22       1|1:100:86
+6      27501688        rs7747444       T       C       .       PASS    AA=C;DP=150     GT:GQ:DP        1|0:100:41      1|1:69:23       1|1:100:86
+8      9216331 rs12543276      G       A       .       PASS    AA=g;DP=125     GT:GQ:DP        1|0:100:41      1|1:75:25       1|1:100:59
+7      132769093       rs2059376       A       G       .       PASS    AA=A;DP=111     GT:GQ:DP        1|0:100:41      1|1:75:27       1|1:100:37
+3      130665278       rs55860024      T       C       .       PASS    AA=T;DP=134     GT:GQ:DP        1|0:100:41      1|1:78:26       1|1:100:68
+14     53651578        rs932684        G       A       .       PASS    AA=A;DP=132     GT:GQ:DP        1|0:100:41      1|1:81:27       1|1:100:64
+12     41137705        rs2053943       T       C       .       PASS    AA=T;DP=136     GT:GQ:DP        1|0:100:41      1|1:87:38       1|1:100:46
+6      88714066        rs10944335      C       T       .       PASS    AA=C;DP=156     GT:GQ:DP        1|0:100:41      1|1:93:32       1|1:100:83
+14     29146394        .       T       C       .       PASS    AA=T;DP=136     GT:GQ:DP        1|0:100:42      0|0:100:34      1|0:100:60
+3      171969445       rs61792522      G       A       .       PASS    AA=G;DP=140     GT:GQ:DP        1|0:100:42      0|0:100:34      1|0:100:65
+1      51505617        .       C       T       .       PASS    AA=C;DP=142     GT:GQ:DP        1|0:100:42      0|0:100:34      1|0:100:68
+1      10790408        rs1750860       G       A       .       PASS    AA=G;DP=165;HM2;HM3     GT:GQ:DP        1|0:100:42      0|0:100:35      1|0:100:87
+20     44225990        rs6074051       T       C       .       PASS    AA=T;DP=156     GT:GQ:DP        1|0:100:42      0|0:100:38      1|0:100:75
+12     24954271        rs11047702      G       A       .       PASS    AA=g;DP=130     GT:GQ:DP        1|0:100:42      0|0:13:14       1|0:100:75
+2      95890725        .       A       G       .       PASS    AA=-;DP=162     GT:GQ:DP        1|0:100:42      0|0:27:30       1|0:29:79
+3      122785367       rs11714812      G       A       .       PASS    AA=g;DP=116     GT:GQ:DP        1|0:100:42      0|0:33:16       1|0:100:61
+19     8108297 rs1531548       C       T       .       PASS    AA=.;DP=105     GT:GQ:DP        1|0:100:42      0|0:41:14       1|0:100:38
+3      24318596        .       C       A       .       PASS    AA=C;DP=137     GT:GQ:DP        1|0:100:42      0|0:41:26       1|0:100:67
+6      167506092       .       C       A       .       PASS    AA=c;DP=146     GT:GQ:DP        1|0:100:42      0|0:47:16       1|0:100:77
+4      153870679       .       A       C       .       PASS    AA=A;DP=146     GT:GQ:DP        1|0:100:42      0|0:47:25       1|0:100:79
+14     95132302        rs11625504      C       T       .       PASS    AA=C;DP=103     GT:GQ:DP        1|0:100:42      0|0:50:16       1|0:100:35
+12     67081708        rs4913443       C       A       .       PASS    AA=C;DP=137     GT:GQ:DP        1|0:100:42      0|0:50:16       1|0:100:78
+1      47078088        rs12078446      G       C       .       PASS    AA=G;DP=144     GT:GQ:DP        1|0:100:42      0|0:52:28       1|0:100:73
+11     74564813        rs1789693       T       A       .       PASS    AA=A;DP=132     GT:GQ:DP        1|0:100:42      0|0:53:18       1|0:100:70
+11     60398722        .       C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        1|0:100:42      0|0:56:19       1|0:100:48
+7      5022042 rs7781026       A       G       .       PASS    AA=a;DP=152     GT:GQ:DP        1|0:100:42      0|0:57:26       1|0:100:85
+15     54583191        .       C       T       .       PASS    AA=c;DP=124     GT:GQ:DP        1|0:100:42      0|0:59:20       1|0:100:60
+3      44887576        .       G       A       .       PASS    AA=g;DP=137     GT:GQ:DP        1|0:100:42      0|0:62:20       1|0:100:70
+22     34232881        .       G       A       .       PASS    AA=G;DP=139     GT:GQ:DP        1|0:100:42      0|0:62:20       1|0:100:76
+3      8678167 rs17049426      T       C       .       PASS    AA=T;DP=152     GT:GQ:DP        1|0:100:42      0|0:65:22       1|0:100:88
+3      105732507       rs2961210       A       G       .       PASS    AA=G;DP=124     GT:GQ:DP        1|0:100:42      0|0:68:22       1|0:100:60
+6      150525603       rs9371787       T       C       .       PASS    AA=T;DP=133     GT:GQ:DP        1|0:100:42      0|0:68:23       1|0:100:72
+2      67745578        rs1549782       A       G       .       PASS    AA=G;DP=155     GT:GQ:DP        1|0:100:42      0|0:69:34       1|0:100:82
+16     65420448        rs3026089       T       C       .       PASS    AA=t;DP=147     GT:GQ:DP        1|0:100:42      0|0:71:24       1|0:100:82
+10     128306917       .       T       C       .       PASS    AA=T;DP=115     GT:GQ:DP        1|0:100:42      0|0:71:25       1|0:100:49
+11     74913071        rs61434228      T       C       .       PASS    AA=T;DP=162     GT:GQ:DP        1|0:100:42      0|0:71:25       1|0:100:96
+2      37453286        .       C       T       .       PASS    AA=C;DP=156     GT:GQ:DP        1|0:100:42      0|0:71:30       1|0:100:86
+11     50019509        .       A       G       .       PASS    AA=a;DP=160     GT:GQ:DP        1|0:100:42      0|0:73:39       1|0:80:80
+6      27848279        rs760587        C       A       .       PASS    AA=C;DP=160     GT:GQ:DP        1|0:100:42      0|0:74:24       1|0:100:94
+16     56593650        rs60934247      C       T       .       PASS    AA=C;DP=161     GT:GQ:DP        1|0:100:42      0|0:74:25       1|0:100:93
+15     72051508        .       C       T       .       PASS    AA=C;DP=143     GT:GQ:DP        1|0:100:42      0|0:74:26       1|0:100:75
+2      208421729       .       C       A       .       PASS    AA=C;DP=155     GT:GQ:DP        1|0:100:42      0|0:77:25       1|0:100:91
+10     91213904        rs7090764       A       T       .       PASS    AA=A;DP=156     GT:GQ:DP        1|0:100:42      0|0:77:26       1|0:100:92
+4      53113677        rs57195592      G       C       .       PASS    AA=G;DP=158     GT:GQ:DP        1|0:100:42      0|0:77:29       1|0:100:91
+14     104383112       rs2582520       T       C       .       PASS    AA=C;DP=140     GT:GQ:DP        1|0:100:42      0|0:80:27       1|0:100:70
+3      87292493        .       G       T       .       PASS    AA=G;DP=146     GT:GQ:DP        1|0:100:42      0|0:81:33       1|0:100:73
+19     46524296        rs12981053      C       T       .       PASS    AA=C;DP=169     GT:GQ:DP        1|0:100:42      0|0:83:28       1|0:100:51
+20     23810844        rs55658105      G       A       .       PASS    AA=G;DP=165     GT:GQ:DP        1|0:100:42      0|0:89:29       1|0:100:48
+1      83263981        rs2274895       G       C       .       PASS    AA=C;DP=131;HM2 GT:GQ:DP        1|0:100:42      0|0:89:29       1|0:100:59
+7      38157885        rs1524061       A       G       .       PASS    AA=A;DP=175     GT:GQ:DP        1|0:100:42      0|0:89:29       1|0:100:59
+2      52694896        .       T       C       .       PASS    AA=T;DP=131     GT:GQ:DP        1|0:100:42      0|0:89:29       1|0:100:61
+22     23481437        .       G       A       .       PASS    AA=G;DP=139     GT:GQ:DP        1|0:100:42      0|0:89:30       1|0:100:65
+12     124451562       rs60667973      T       G       .       PASS    AA=T;DP=154     GT:GQ:DP        1|0:100:42      0|0:92:30       1|0:100:82
+4      187708108       .       T       C       .       PASS    AA=C;DP=144     GT:GQ:DP        1|0:100:42      0|0:92:31       1|0:100:71
+2      219608312       rs17852959      C       T       .       PASS    AA=C;DP=144     GT:GQ:DP        1|0:100:42      0|0:95:32       1|0:100:72
+1      207895578       rs12126519      C       T       .       PASS    AA=C;DP=146;HM2;HM3     GT:GQ:DP        1|0:100:42      0|0:98:32       1|0:100:74
+18     54585371        rs9952348       A       G       .       PASS    AA=A;DP=134     GT:GQ:DP        1|0:100:42      1|0:100:20      1|1:100:74
+3      113410834       rs6781215       A       C       .       PASS    AA=C;DP=103     GT:GQ:DP        1|0:100:42      1|0:100:22      1|1:78:27
+2      75172582        rs58959290      G       A       .       PASS    AA=A;DP=152     GT:GQ:DP        1|0:100:42      1|0:100:25      1|1:100:82
+6      89317074        rs12207312      A       G       .       PASS    AA=A;DP=133     GT:GQ:DP        1|0:100:42      1|0:100:28      1|1:100:63
+4      38418706        rs9968507       C       A       .       PASS    AA=.;DP=159     GT:GQ:DP        1|0:100:42      1|0:100:32      1|1:100:83
+14     96110193        .       A       T       .       PASS    AA=A;DP=159     GT:GQ:DP        1|0:100:42      1|0:100:37      1|1:100:80
+12     24848317        rs6487417       A       G       .       PASS    AA=G;DP=142     GT:GQ:DP        1|0:100:42      1|0:73:28       1|1:100:73
+17     47061965        rs9912072       T       C       .       PASS    AA=t;DP=162     GT:GQ:DP        1|0:100:42      1|0:95:25       1|1:100:96
+4      144962713       rs1838534       T       C       .       PASS    AA=N;DP=127     GT:GQ:DP        1|0:100:42      1|1:22:22       1|1:100:54
+14     50690687        rs7156550       T       A       .       PASS    AA=A;DP=131     GT:GQ:DP        1|0:100:42      1|1:64:28       1|1:100:57
+16     49823364        rs7499931       A       G       .       PASS    AA=A;DP=131     GT:GQ:DP        1|0:100:42      1|1:72:24       1|1:100:65
+20     5907832 rs236105        C       G       .       PASS    AA=C;DP=149     GT:GQ:DP        1|0:100:42      1|1:75:25       1|1:100:71
+1      53710809        rs8179495       G       C       .       PASS    AA=G;DP=137     GT:GQ:DP        1|0:100:42      1|1:78:26       1|1:100:72
+2      160587897       rs883423        G       A       .       PASS    AA=G;DP=151     GT:GQ:DP        1|0:100:42      1|1:78:26       1|1:100:80
+10     105995725       rs612406        T       C       .       PASS    AA=-;DP=152     GT:GQ:DP        1|0:100:42      1|1:78:26       1|1:100:83
+7      7810297 rs6943514       G       T       .       PASS    AA=T;DP=152     GT:GQ:DP        1|0:100:42      1|1:78:28       1|1:100:83
+8      13625165        rs11203517      G       C       .       PASS    AA=C;DP=137     GT:GQ:DP        1|0:100:42      1|1:90:31       1|1:100:64
+6      111014216       rs6941942       A       G       .       PASS    AA=N;DP=141     GT:GQ:DP        1|0:100:42      1|1:93:32       1|1:100:69
+16     27761297        .       G       C       .       PASS    AA=G;DP=143     GT:GQ:DP        1|0:100:43      0|0:37:17       1|0:100:84
+5      132565129       rs4958167       C       A       .       PASS    AA=A;DP=166     GT:GQ:DP        1|0:100:43      0|0:44:20       1|0:100:54
+1      110530107       rs4839224       G       T       .       PASS    AA=g;DP=145     GT:GQ:DP        1|0:100:43      0|0:44:20       1|0:100:85
+12     46652716        rs2071358       G       T       .       PASS    AA=T;DP=153     GT:GQ:DP        1|0:100:43      0|0:46:26       1|0:100:88
+1      9247954 .       G       A       .       PASS    AA=G;DP=142     GT:GQ:DP        1|0:100:43      0|0:47:16       1|0:100:40
+12     92472171        rs17021307      G       T       .       PASS    AA=G;DP=155     GT:GQ:DP        1|0:100:43      0|0:47:22       1|0:100:94
+6      158194995       rs1887761       A       G       .       PASS    AA=G;DP=134     GT:GQ:DP        1|0:100:43      0|0:49:24       1|0:100:69
+1      154472745       rs1052067       G       A       .       PASS    AA=G;DP=144;HM2;HM3     GT:GQ:DP        1|0:100:43      0|0:50:17       1|0:100:82
+2      241571103       rs4577273       T       C       .       PASS    AA=T;DP=147     GT:GQ:DP        1|0:100:43      0|0:50:19       1|0:100:80
+3      57271792        rs2102628       C       T       .       PASS    AA=C;DP=119     GT:GQ:DP        1|0:100:43      0|0:50:21       1|0:100:56
+3      171121942       rs59993138      C       T       .       PASS    AA=T;DP=161     GT:GQ:DP        1|0:100:43      0|0:51:26       1|0:100:93
+1      164057423       .       C       T       .       PASS    AA=C;DP=140     GT:GQ:DP        1|0:100:43      0|0:53:17       1|0:100:80
+12     44066853        .       C       T       .       PASS    AA=T;DP=110     GT:GQ:DP        1|0:100:43      0|0:56:18       1|0:100:49
+11     113512193       rs60065297      G       C       .       PASS    AA=G;DP=145     GT:GQ:DP        1|0:100:43      0|0:56:19       1|0:100:83
+2      201317365       rs10931918      A       G       .       PASS    AA=G;DP=143     GT:GQ:DP        1|0:100:43      0|0:59:20       1|0:100:77
+9      117542873       .       G       A       .       PASS    AA=g;DP=148     GT:GQ:DP        1|0:100:43      0|0:59:21       1|0:100:85
+14     88511990        .       G       A       .       PASS    AA=G;DP=151     GT:GQ:DP        1|0:100:43      0|0:62:22       1|0:100:87
+2      100607728       .       A       G       .       PASS    AA=A;DP=148     GT:GQ:DP        1|0:100:43      0|0:65:22       1|0:100:81
+13     110859138       rs34449580      C       T       .       PASS    AA=c;DP=147     GT:GQ:DP        1|0:100:43      0|0:68:22       1|0:100:84
+11     73057971        .       A       T       .       PASS    AA=A;DP=137     GT:GQ:DP        1|0:100:43      0|0:71:24       1|0:100:70
+20     48044572        rs6091082       A       G       .       PASS    AA=G;DP=138     GT:GQ:DP        1|0:100:43      0|0:74:25       1|0:100:72
+9      132490647       rs12000213      G       A       .       PASS    AA=G;DP=160     GT:GQ:DP        1|0:100:43      0|0:79:29       1|0:100:87
+1      177170127       .       G       A       .       PASS    AA=G;DP=138     GT:GQ:DP        1|0:100:43      0|0:80:26       1|0:100:72
+6      107077034       .       T       C       .       PASS    AA=T;DP=149     GT:GQ:DP        1|0:100:43      0|0:83:27       1|0:100:79
+7      111472015       .       G       T       .       PASS    AA=G;DP=164     GT:GQ:DP        1|0:100:43      0|0:83:28       1|0:100:98
+1      77459184        rs6670216       T       G       .       PASS    AA=T;DP=152     GT:GQ:DP        1|0:100:43      0|0:86:28       1|0:100:35
+17     63261800        .       A       T       .       PASS    AA=a;DP=123     GT:GQ:DP        1|0:100:43      0|0:86:28       1|0:100:42
+13     40068991        .       T       C       .       PASS    AA=T;DP=161     GT:GQ:DP        1|0:100:43      0|0:86:28       1|0:100:93
+16     24992580        rs9928693       G       A       .       PASS    AA=g;DP=160     GT:GQ:DP        1|0:100:43      0|0:86:30       1|0:100:86
+22     16969842        rs9647302       G       A       .       PASS    AA=G;DP=152     GT:GQ:DP        1|0:100:43      0|0:89:29       1|0:100:79
+21     43009242        rs9976272       T       G       .       PASS    AA=T;DP=150     GT:GQ:DP        1|0:100:43      0|0:92:30       1|0:100:78
+10     90965065        .       G       A       .       PASS    AA=G;DP=173     GT:GQ:DP        1|0:100:43      0|0:95:31       1|0:100:97
+7      17684644        rs2723547       T       C       .       PASS    AA=T;DP=164     GT:GQ:DP        1|0:100:43      0|0:98:32       1|0:100:87
+2      165110047       rs59724456      T       C       .       PASS    AA=T;DP=132     GT:GQ:DP        1|0:100:43      1|0:100:20      1|1:100:74
+1      30140974        rs1550968       T       C       .       PASS    AA=T;DP=156;HM2 GT:GQ:DP        1|0:100:43      1|0:100:21      1|1:100:95
+12     93873829        rs2555047       C       T       .       PASS    AA=c;DP=133     GT:GQ:DP        1|0:100:43      1|0:100:24      1|1:100:62
+12     12234303        .       C       A       .       PASS    AA=C;DP=132     GT:GQ:DP        1|0:100:43      1|0:100:24      1|1:100:65
+5      112563244       rs12659754      T       C       .       PASS    AA=C;DP=144     GT:GQ:DP        1|0:100:43      1|0:100:24      1|1:100:78
+9      882661  rs56314823      G       A       .       PASS    AA=A;DP=146     GT:GQ:DP        1|0:100:43      1|0:100:27      1|1:100:78
+18     40708686        rs639964        T       C       .       PASS    AA=C;DP=152     GT:GQ:DP        1|0:100:43      1|0:100:30      1|1:100:80
+1      77260005        rs199679        T       C       .       PASS    AA=C;DP=158;HM2;HM3     GT:GQ:DP        1|0:100:43      1|0:100:30      1|1:100:86
+6      25013757        rs2817727       G       A       .       PASS    AA=G;DP=108     GT:GQ:DP        1|0:100:43      1|0:69:23       1|1:65:44
+5      171054516       rs10055794      A       G       .       PASS    AA=A;DP=120     GT:GQ:DP        1|0:100:43      1|0:71:14       1|1:100:63
+11     57639022        rs1031234       C       G       .       PASS    AA=C;DP=138     GT:GQ:DP        1|0:100:43      1|0:72:20       1|1:100:74
+22     38734637        rs56376879      C       T       .       PASS    AA=C;DP=124     GT:GQ:DP        1|0:100:43      1|0:75:21       1|1:100:61
+11     44397793        rs2054236       C       T       .       PASS    AA=C;DP=137     GT:GQ:DP        1|0:100:43      1|0:89:19       1|1:100:77
+7      35527471        rs343070        T       C       .       PASS    AA=C;DP=124     GT:GQ:DP        1|0:100:43      1|1:24:19       1|1:100:52
+10     50233020        rs9665575       A       G       .       PASS    AA=G;DP=138     GT:GQ:DP        1|0:100:43      1|1:48:16       1|1:100:76
+2      70675742        rs570810        T       C       .       PASS    AA=C;DP=122     GT:GQ:DP        1|0:100:43      1|1:54:20       1|1:100:45
+2      230708055       rs1529377       G       A       .       PASS    AA=A;DP=144     GT:GQ:DP        1|0:100:43      1|1:57:19       1|1:100:42
+15     25481742        rs3098519       T       C       .       PASS    AA=C;DP=139     GT:GQ:DP        1|0:100:43      1|1:84:28       1|1:100:67
+21     32141447        rs2833541       G       T       .       PASS    AA=G;DP=143     GT:GQ:DP        1|0:100:43      1|1:93:31       1|1:100:56
+3      60854578        rs6764919       G       A       .       PASS    AA=G;DP=177     GT:GQ:DP        1|0:100:44      0|0:100:35      1|0:100:51
+8      102430789       rs16867570      T       C       .       PASS    AA=T;DP=162     GT:GQ:DP        1|0:100:44      0|0:100:35      1|0:100:83
+10     110540548       .       A       G       .       PASS    AA=A;DP=170     GT:GQ:DP        1|0:100:44      0|0:100:37      1|0:100:91
+6      107043572       rs9373874       C       T       .       PASS    AA=C;DP=166     GT:GQ:DP        1|0:100:44      0|0:100:39      1|0:100:85
+16     17836460        .       T       C       .       PASS    AA=T;DP=169     GT:GQ:DP        1|0:100:44      0|0:100:39      1|0:100:90
+10     26954717        .       A       G       .       PASS    AA=.;DP=182     GT:GQ:DP        1|0:100:44      0|0:13:29       1|0:100:66
+2      25179822        rs60896637      T       A       .       PASS    AA=T;DP=125     GT:GQ:DP        1|0:100:44      0|0:38:12       1|0:100:70
+5      117992904       rs58230195      G       A       .       PASS    AA=G;DP=139     GT:GQ:DP        1|0:100:44      0|0:53:19       1|0:100:77
+8      130792083       .       A       C       .       PASS    AA=A;DP=163     GT:GQ:DP        1|0:100:44      0|0:53:28       1|0:100:88
+12     26189844        rs17464196      C       T       .       PASS    AA=C;DP=160     GT:GQ:DP        1|0:100:44      0|0:54:25       1|0:100:92
+1      113176092       .       T       C       .       PASS    AA=T;DP=126     GT:GQ:DP        1|0:100:44      0|0:56:19       1|0:100:50
+11     65418329        .       G       A       .       PASS    AA=G;DP=162     GT:GQ:DP        1|0:100:44      0|0:59:21       1|0:100:52
+14     88008049        rs57691432      G       A       .       PASS    AA=G;DP=118     GT:GQ:DP        1|0:100:44      0|0:65:22       1|0:100:52
+6      32819140        rs17432921      T       C       .       PASS    AA=t;DP=131     GT:GQ:DP        1|0:100:44      0|0:65:22       1|0:100:67
+10     105317462       rs17115724      C       T       .       PASS    AA=C;DP=129     GT:GQ:DP        1|0:100:44      0|0:65:24       1|0:100:63
+17     77740532        rs11077981      C       T       .       PASS    AA=T;DP=156     GT:GQ:DP        1|0:100:44      0|0:68:22       1|0:100:88
+7      31240236        rs1011606       C       T       .       PASS    AA=C;DP=151     GT:GQ:DP        1|0:100:44      0|0:68:22       1|0:100:88
+1      7191870 rs4908448       C       T       .       PASS    AA=C;DP=156;HM2 GT:GQ:DP        1|0:100:44      0|0:71:23       1|0:100:48
+6      128380211       .       C       T       .       PASS    AA=C;DP=126     GT:GQ:DP        1|0:100:44      0|0:71:23       1|0:100:59
+2      84686805        .       C       T       .       PASS    AA=C;DP=135     GT:GQ:DP        1|0:100:44      0|0:71:23       1|0:100:66
+19     41271507        rs59105883      G       A       .       PASS    AA=G;DP=165     GT:GQ:DP        1|0:100:44      0|0:71:24       1|0:100:55
+1      201292508       rs61217599      C       T       .       PASS    AA=c;DP=144     GT:GQ:DP        1|0:100:44      0|0:71:24       1|0:100:74
+12     16357438        rs7305495       G       A       .       PASS    AA=A;DP=152     GT:GQ:DP        1|0:100:44      0|0:74:25       1|0:100:82
+5      100540237       rs2203152       G       A       .       PASS    AA=A;DP=152     GT:GQ:DP        1|0:100:44      0|0:74:25       1|0:100:84
+10     21776817        .       T       C       .       PASS    AA=T;DP=164     GT:GQ:DP        1|0:100:44      0|0:77:25       1|0:100:42
+7      92951638        .       C       G       .       PASS    AA=C;DP=152     GT:GQ:DP        1|0:100:44      0|0:77:26       1|0:100:85
+17     62587381        rs1035176       G       C       .       PASS    AA=G;DP=149     GT:GQ:DP        1|0:100:44      0|0:80:26       1|0:100:76
+1      64918878        rs12044266      A       G       .       PASS    AA=A;DP=146;HM2;HM3     GT:GQ:DP        1|0:100:44      0|0:80:27       1|0:100:75
+11     117181983       .       A       T       .       PASS    AA=T;DP=140     GT:GQ:DP        1|0:100:44      0|0:80:28       1|0:100:67
+5      50307658        rs60163039      G       A       .       PASS    AA=G;DP=152     GT:GQ:DP        1|0:100:44      0|0:83:27       1|0:100:82
+11     78173387        rs1790543       G       C       .       PASS    AA=G;DP=159     GT:GQ:DP        1|0:100:44      0|0:89:29       1|0:100:86
+15     34160712        rs789865        A       C       .       PASS    AA=A;DP=138     GT:GQ:DP        1|0:100:44      1|0:100:16      1|1:96:34
+17     27594037        rs34555008      G       A       .       PASS    AA=A;DP=126     GT:GQ:DP        1|0:100:44      1|0:100:24      1|1:100:59
+9      2119798 rs10964907      T       G       .       PASS    AA=T;DP=149     GT:GQ:DP        1|0:100:44      1|0:100:25      1|1:100:79
+19     15917457        rs56811335      G       A       .       PASS    AA=A;DP=123     GT:GQ:DP        1|0:100:44      1|0:80:22       1|1:100:57
+19     2615953 .       C       A       .       PASS    AA=c;DP=153     GT:GQ:DP        1|0:100:44      1|1:23:15       1|1:100:92
+9      117100824       rs1002272       T       A       .       PASS    AA=A;DP=147     GT:GQ:DP        1|0:100:44      1|1:53:29       1|1:100:76
+7      35577108        rs35760358      G       A       .       PASS    AA=A;DP=142     GT:GQ:DP        1|0:100:44      1|1:57:19       1|1:100:74
+10     115832287       rs7076871       C       T       .       PASS    AA=T;DP=136     GT:GQ:DP        1|0:100:44      1|1:60:21       1|1:100:69
+22     23288017        rs4822507       G       A       .       PASS    AA=G;DP=125     GT:GQ:DP        1|0:100:44      1|1:6:12        1|1:100:69
+11     80619797        rs4999943       G       A       .       PASS    AA=A;DP=110     GT:GQ:DP        1|0:100:44      1|1:75:27       1|1:96:32
+11     124608858       .       T       A       .       PASS    AA=T;DP=175     GT:GQ:DP        1|0:100:45      0|0:100:37      1|0:100:49
+2      6418027 .       G       A       .       PASS    AA=G;DP=146     GT:GQ:DP        1|0:100:45      0|0:36:19       1|0:100:85
+4      102498230       rs28360831      G       T       .       PASS    AA=G;DP=158     GT:GQ:DP        1|0:100:45      0|0:40:24       1|0:100:91
+1      55846514        rs2221140       C       T       .       PASS    AA=C;DP=136     GT:GQ:DP        1|0:100:45      0|0:53:17       1|0:100:71
+1      243248243       .       C       G       .       PASS    AA=C;DP=136     GT:GQ:DP        1|0:100:45      0|0:56:20       1|0:100:71
+9      34410287        rs34537547      T       C       .       PASS    AA=t;DP=162     GT:GQ:DP        1|0:100:45      0|0:57:26       1|0:100:51
+10     96987157        rs12764831      G       A       .       PASS    AA=G;DP=126     GT:GQ:DP        1|0:100:45      0|0:59:20       1|0:100:62
+16     23868462        .       A       G       .       PASS    AA=A;DP=153     GT:GQ:DP        1|0:100:45      0|0:59:20       1|0:100:86
+1      85733103        rs6661976       C       T       .       PASS    AA=C;DP=158     GT:GQ:DP        1|0:100:45      0|0:62:21       1|0:100:89
+4      70174595        rs4694708       G       T       .       PASS    AA=-;DP=138     GT:GQ:DP        1|0:100:45      0|0:65:21       1|0:100:73
+12     4260633 rs3217820       T       A       .       PASS    AA=T;DP=151     GT:GQ:DP        1|0:100:45      0|0:68:22       1|0:100:77
+15     36778095        rs12595568      T       G       .       PASS    AA=G;DP=152     GT:GQ:DP        1|0:100:45      0|0:71:23       1|0:100:82
+3      134654049       rs7632831       T       G       .       PASS    AA=T;DP=176     GT:GQ:DP        1|0:100:45      0|0:71:24       1|0:100:60
+6      31041291        rs58129122      A       G       .       PASS    AA=A;DP=142     GT:GQ:DP        1|0:100:45      0|0:71:25       1|0:100:72
+10     72843538        .       C       T       .       PASS    AA=C;DP=131     GT:GQ:DP        1|0:100:45      0|0:75:32       1|0:100:55
+7      131993716       rs59510281      T       C       .       PASS    AA=T;DP=148     GT:GQ:DP        1|0:100:45      0|0:77:25       1|0:100:84
+6      52348917        rs4712005       G       A       .       PASS    AA=g;DP=150     GT:GQ:DP        1|0:100:45      0|0:80:26       1|0:100:36
+10     126018688       rs2807041       T       A       .       PASS    AA=t;DP=158     GT:GQ:DP        1|0:100:45      0|0:81:29       1|0:100:47
+5      77952200        rs35252676      C       T       .       PASS    AA=T;DP=161     GT:GQ:DP        1|0:100:45      0|0:83:29       1|0:100:85
+16     14239050        .       T       G       .       PASS    AA=G;DP=163     GT:GQ:DP        1|0:100:45      0|0:83:34       1|0:100:86
+3      106965112       rs11915926      T       C       .       PASS    AA=C;DP=140     GT:GQ:DP        1|0:100:45      0|0:86:28       1|0:100:67
+13     19978069        .       T       A       .       PASS    AA=T;DP=149     GT:GQ:DP        1|0:100:45      0|0:86:29       1|0:100:35
+11     64224266        rs559095        C       T       .       PASS    AA=-;DP=164     GT:GQ:DP        1|0:100:45      0|0:86:29       1|0:100:92
+19     46438375        rs12982872      C       T       .       PASS    AA=N;DP=174     GT:GQ:DP        1|0:100:45      0|0:95:32       1|0:100:98
+1      95788527        rs1509183       A       G       .       PASS    AA=A;DP=125     GT:GQ:DP        1|0:100:45      1|0:100:19      1|1:65:60
+13     47977652        rs9316386       T       C       .       PASS    AA=C;DP=129     GT:GQ:DP        1|0:100:45      1|0:100:25      1|1:100:59
+15     97847386        rs12904973      A       C       .       PASS    AA=A;DP=161     GT:GQ:DP        1|0:100:45      1|0:100:29      1|1:100:87
+3      39438550        rs17038816      A       G       .       PASS    AA=A;DP=154     GT:GQ:DP        1|0:100:45      1|0:100:31      1|1:100:77
+7      38587705        .       G       A       .       PASS    AA=A;DP=153     GT:GQ:DP        1|0:100:45      1|0:100:32      1|1:100:64
+3      137592202       rs698270        A       G       .       PASS    AA=a;DP=151     GT:GQ:DP        1|0:100:45      1|0:100:36      1|1:100:71
+5      136127680       rs6862570       A       G       .       PASS    AA=A;DP=131     GT:GQ:DP        1|0:100:45      1|0:69:16       1|1:100:70
+11     6773451 rs7122644       G       A       .       PASS    AA=G;DP=145     GT:GQ:DP        1|0:100:45      1|0:76:24       1|1:100:82
+6      160292671       rs765835        G       C       .       PASS    AA=C;DP=119     GT:GQ:DP        1|0:100:45      1|1:37:18       1|1:100:55
+12     131652425       rs35969568      G       T       .       PASS    AA=G;DP=143     GT:GQ:DP        1|0:100:45      1|1:49:22       1|1:100:64
+11     8592732 rs10734634      T       A       .       PASS    AA=A;DP=134     GT:GQ:DP        1|0:100:45      1|1:54:18       1|1:100:74
+6      64301956        rs2758242       C       G       .       PASS    AA=C;DP=120     GT:GQ:DP        1|0:100:45      1|1:54:24       1|1:100:52
+6      159002261       rs2306749       A       G       .       PASS    AA=N;DP=156     GT:GQ:DP        1|0:100:45      1|1:60:20       1|1:100:89
+1      61625614        rs11207732      T       C       .       PASS    AA=C;DP=141;HM2 GT:GQ:DP        1|0:100:45      1|1:71:31       1|1:100:65
+10     111602567       rs11194893      T       C       .       PASS    AA=T;DP=164     GT:GQ:DP        1|0:100:46      0|0:100:33      1|0:100:86
+11     64437629        .       C       G       .       PASS    AA=c;DP=136     GT:GQ:DP        1|0:100:46      0|0:40:18       1|0:100:74
+1      201586276       rs6661575       T       C       .       PASS    AA=T;DP=127;HM2 GT:GQ:DP        1|0:100:46      0|0:47:16       1|0:100:63
+14     21983834        rs10873018      G       A       .       PASS    AA=A;DP=112     GT:GQ:DP        1|0:100:46      0|0:53:17       1|0:100:49
+1      232370768       rs2045519       A       G       .       PASS    AA=A;DP=147     GT:GQ:DP        1|0:100:46      0|0:56:19       1|0:100:80
+17     60571318        .       G       A       .       PASS    AA=g;DP=170     GT:GQ:DP        1|0:100:46      0|0:57:30       1|0:100:52
+11     59940853        .       A       C       .       PASS    AA=A;DP=149     GT:GQ:DP        1|0:100:46      0|0:63:26       1|0:100:78
+15     89403317        rs12441987      C       A       .       PASS    AA=C;DP=158     GT:GQ:DP        1|0:100:46      0|0:65:21       1|0:100:91
+2      2646944 .       C       A       .       PASS    AA=A;DP=148     GT:GQ:DP        1|0:100:46      0|0:68:22       1|0:100:80
+5      142088766       .       G       C       .       PASS    AA=G;DP=152     GT:GQ:DP        1|0:100:46      0|0:68:23       1|0:100:85
+14     52783515        .       G       C       .       PASS    AA=G;DP=157     GT:GQ:DP        1|0:100:46      0|0:68:23       1|0:100:88
+10     98247729        rs1010719       C       T       .       PASS    AA=C;DP=149     GT:GQ:DP        1|0:100:46      0|0:89:29       1|0:100:77
+1      179845881       rs6700361       G       A       .       PASS    AA=G;DP=188;HM2 GT:GQ:DP        1|0:100:46      0|0:92:32       1|0:100:63
+3      30627541        .       A       G       .       PASS    AA=A;DP=151     GT:GQ:DP        1|0:100:46      0|0:95:31       1|0:100:74
+5      111294560       rs474807        C       A       .       PASS    AA=A;DP=174     GT:GQ:DP        1|0:100:46      1|0:100:33      1|1:100:92
+15     32093484        rs8033305       G       C       .       PASS    AA=G;DP=117     GT:GQ:DP        1|0:100:46      1|0:31:20       1|1:100:51
+3      53236187        .       G       T       .       PASS    AA=G;DP=139     GT:GQ:DP        1|0:100:46      1|0:75:18       1|1:100:76
+17     23612486        rs9914405       G       A       .       PASS    AA=.;DP=156     GT:GQ:DP        1|0:100:46      1|0:89:22       1|1:100:89
+2      133020698       rs3109134       T       C       .       PASS    AA=t;DP=138     GT:GQ:DP        1|0:100:46      1|1:38:24       1|1:100:69
+11     9603111 rs2060477       G       T       .       PASS    AA=T;DP=127     GT:GQ:DP        1|0:100:46      1|1:66:22       1|1:97:60
+6      113930777       .       G       T       .       PASS    AA=T;DP=146     GT:GQ:DP        1|0:100:47      0|0:100:33      1|0:100:68
+3      172814419       rs6798359       A       G       .       PASS    AA=a;DP=133     GT:GQ:DP        1|0:100:47      0|0:44:14       1|0:100:73
+2      20450038        rs60649654      C       T       .       PASS    AA=C;DP=148     GT:GQ:DP        1|0:100:47      0|0:50:17       1|0:100:86
+1      158397812       rs58599621      C       T       .       PASS    AA=T;DP=152     GT:GQ:DP        1|0:100:47      0|0:53:18       1|0:100:86
+3      12883674        .       C       T       .       PASS    AA=C;DP=139     GT:GQ:DP        1|0:100:47      0|0:71:23       1|0:100:58
+7      77957891        .       G       C       .       PASS    AA=G;DP=135     GT:GQ:DP        1|0:100:47      0|0:92:30       1|0:100:57
+8      41847067        .       C       T       .       PASS    AA=C;DP=172     GT:GQ:DP        1|0:100:47      0|0:95:32       1|0:100:96
+17     37173783        rs7406225       A       G       .       PASS    AA=A;DP=139     GT:GQ:DP        1|0:100:47      1|0:100:13      1|1:100:77
+10     34092168        rs2777498       T       G       .       PASS    AA=G;DP=147     GT:GQ:DP        1|0:100:47      1|0:100:23      1|1:100:82
+1      56688676        rs6688564       A       C       .       PASS    AA=A;DP=121     GT:GQ:DP        1|0:100:47      1|1:45:15       1|1:100:60
+5      89925887        rs250369        G       C       .       PASS    AA=C;DP=128     GT:GQ:DP        1|0:100:47      1|1:54:20       1|1:100:63
+10     122335474       rs11592921      A       G       .       PASS    AA=G;DP=147     GT:GQ:DP        1|0:100:47      1|1:60:20       1|1:100:83
+4      37264453        rs2973274       G       A       .       PASS    AA=A;DP=131     GT:GQ:DP        1|0:100:47      1|1:60:22       1|1:100:62
+6      32841965        rs9276598       G       A       .       PASS    AA=g;DP=164     GT:GQ:DP        1|0:100:47      1|1:66:22       1|1:100:96
+2      124199364       rs13026715      G       A       .       PASS    AA=G;DP=143     GT:GQ:DP        1|0:100:47      1|1:78:27       1|1:100:67
+1      44192878        rs58429496      A       G       .       PASS    AA=A;DP=138     GT:GQ:DP        1|0:100:48      0|0:40:19       1|0:100:72
+22     33325491        rs16994423      C       T       .       PASS    AA=C;DP=147     GT:GQ:DP        1|0:100:48      0|0:56:18       1|0:100:81
+2      233911537       rs3792092       G       A       .       PASS    AA=G;DP=147     GT:GQ:DP        1|0:100:48      0|0:56:22       1|0:100:77
+5      142231686       rs6896779       C       T       .       PASS    AA=C;DP=144     GT:GQ:DP        1|0:100:48      0|0:62:20       1|0:100:74
+2      62215552        rs12713455      T       A       .       PASS    AA=C;DP=160     GT:GQ:DP        1|0:100:48      0|0:70:29       1|0:100:82
+12     92208348        rs10777499      C       T       .       PASS    AA=T;DP=163     GT:GQ:DP        1|0:100:48      0|0:74:24       1|0:100:92
+8      128731394       .       T       C       .       PASS    AA=T;DP=163     GT:GQ:DP        1|0:100:48      0|0:80:26       1|0:100:92
+9      117960910       .       C       T       .       PASS    AA=C;DP=165     GT:GQ:DP        1|0:100:48      0|0:83:28       1|0:100:48
+22     25192212        rs713998        T       C       .       PASS    AA=C;DP=126     GT:GQ:DP        1|0:100:48      1|0:71:15       1|1:100:50
+9      71049861        rs9314671       G       C       .       PASS    AA=C;DP=146     GT:GQ:DP        1|0:100:48      1|1:90:30       1|1:100:70
+1      227182226       rs710813        C       T       .       PASS    AA=T;DP=163     GT:GQ:DP        1|0:100:48      1|1:90:30       1|1:100:88
+12     112224825       rs7953252       A       G       .       PASS    AA=a;DP=164     GT:GQ:DP        1|0:100:49      0|0:100:35      1|0:100:82
+4      56678441        .       G       C       .       PASS    AA=G;DP=130     GT:GQ:DP        1|0:100:49      0|0:100:38      1|0:100:45
+10     133875222       .       C       T       .       PASS    AA=C;DP=143     GT:GQ:DP        1|0:100:49      0|0:44:15       1|0:100:78
+16     87667958        .       A       G       .       PASS    AA=a;DP=168     GT:GQ:DP        1|0:100:49      0|0:50:21       1|0:100:99
+12     8399100 rs11838044      C       T       .       PASS    AA=.;DP=143     GT:GQ:DP        1|0:100:49      0|0:53:17       1|0:100:76
+20     48471986        rs61285261      C       T       .       PASS    AA=C;DP=161     GT:GQ:DP        1|0:100:49      0|0:53:18       1|0:100:92
+16     46971132        .       G       A       .       PASS    AA=G;DP=152     GT:GQ:DP        1|0:100:49      0|0:80:28       1|0:100:78
+5      128679889       rs10077924      C       T       .       PASS    AA=T;DP=128     GT:GQ:DP        1|0:100:49      1|1:39:13       1|1:100:65
+10     121711332       rs10749335      T       G       .       PASS    AA=G;DP=130     GT:GQ:DP        1|0:100:49      1|1:45:15       1|1:100:59
+16     68497206        rs8049373       G       T       .       PASS    AA=T;DP=171     GT:GQ:DP        1|0:100:49      1|1:55:30       1|1:100:92
+12     74082988        rs7135440       G       T       .       PASS    AA=G;DP=199     GT:GQ:DP        1|0:100:50      0|0:25:30       1|0:100:54
+9      37751923        .       A       G       .       PASS    AA=A;DP=146     GT:GQ:DP        1|0:100:50      0|0:65:21       1|0:100:70
+1      233369855       .       C       T       .       PASS    AA=C;DP=157     GT:GQ:DP        1|0:100:50      0|0:86:30       1|0:100:77
+12     102235265       rs7311606       A       C       .       PASS    AA=A;DP=175     GT:GQ:DP        1|0:100:50      0|0:89:29       1|0:100:47
+1      223614518       rs6684916       T       C       .       PASS    AA=C;DP=139;HM2 GT:GQ:DP        1|0:100:50      1|0:100:24      1|1:100:64
+5      60250504        rs4647086       A       C       .       PASS    AA=A;DP=164     GT:GQ:DP        1|0:100:50      1|0:100:32      1|1:100:82
+20     59320885        rs2427067       G       A       .       PASS    AA=A;DP=154     GT:GQ:DP        1|0:100:50      1|1:10:19       1|1:100:77
+9      15379610        rs2490855       T       G       .       PASS    AA=T;DP=166     GT:GQ:DP        1|0:100:50      1|1:84:28       1|1:100:92
+20     20781133        .       A       G       .       PASS    AA=A;DP=136     GT:GQ:DP        1|0:100:51      0|0:32:21       1|0:100:65
+11     8263436 .       C       A       .       PASS    AA=C;DP=177     GT:GQ:DP        1|0:100:51      0|0:43:25       1|0:100:57
+10     91415745        rs7100603       T       C       .       PASS    AA=T;DP=181     GT:GQ:DP        1|0:100:51      1|0:100:31      1|1:100:83
+11     48848453        rs61898591      G       A       .       PASS    AA=.;DP=152     GT:GQ:DP        1|0:100:51      1|0:100:36      1|1:42:64
+3      176733135       rs4287917       C       T       .       PASS    AA=T;DP=149     GT:GQ:DP        1|0:100:51      1|1:72:24       1|1:100:72
+9      100791837       rs7859159       G       A       .       PASS    AA=G;DP=186     GT:GQ:DP        1|0:100:52      0|0:83:28       1|0:100:62
+2      168767757       rs6728947       G       C       .       PASS    AA=G;DP=166     GT:GQ:DP        1|0:100:52      0|0:89:29       1|0:100:47
+14     68463625        rs12896606      G       C       .       PASS    AA=G;DP=168     GT:GQ:DP        1|0:100:53      0|0:71:24       1|0:100:87
+10     7710202 rs61834791      T       C       .       PASS    AA=t;DP=159     GT:GQ:DP        1|0:100:53      0|0:83:34       1|0:100:74
+9      93823421        rs16908089      T       C       .       PASS    AA=T;DP=138     GT:GQ:DP        1|0:100:53      1|1:78:26       1|1:100:59
+13     108891489       rs1359942       C       G       .       PASS    AA=G;DP=160     GT:GQ:DP        1|0:100:53      1|1:78:26       1|1:100:84
+17     71762079        .       G       C       .       PASS    AA=G;DP=168     GT:GQ:DP        1|0:100:54      0|0:89:30       1|0:100:88
+5      38446360        .       G       A       .       PASS    AA=G;DP=143     GT:GQ:DP        1|0:100:54      1|0:43:19       1|1:100:72
+17     1406307 rs17821288      C       T       .       PASS    AA=C;DP=153     GT:GQ:DP        1|0:100:57      0|0:56:20       1|0:100:78
+12     34695031        rs10844978      T       C       .       PASS    AA=.;DP=151     GT:GQ:DP        1|0:10:48       1|1:55:34       1|1:90:71
+18     9481303 rs12454651      A       G       .       PASS    AA=A;DP=67      GT:GQ:DP        1|0:11:10       0|0:71:23       1|0:100:27
+1      3108086 .       G       A       .       PASS    AA=G;DP=93      GT:GQ:DP        1|0:11:23       0|0:38:13       1|0:100:46
+X      105214565       rs7056373       A       C       .       PASS    AA=N;DP=91      GT:GQ:DP        1|0:11:7        1|1:69:24       1|1:100:37
+3      25175587        .       G       A       .       PASS    AA=G;DP=113     GT:GQ:DP        1|0:12:15       0|0:83:27       1|0:100:72
+4      36110130        .       C       T       .       PASS    AA=T;DP=112     GT:GQ:DP        1|0:12:22       0|0:89:29       1|0:100:62
+5      152758048       rs6877008       C       T       .       PASS    AA=T;DP=93      GT:GQ:DP        1|0:13:9        0|0:62:20       1|0:100:63
+16     9680030 rs3968868       G       A       .       PASS    AA=A;DP=112     GT:GQ:DP        1|0:16:29       1|1:63:21       1|1:100:63
+16     87405858        rs8191469       G       T       .       PASS    AA=T;DP=56      GT:GQ:DP        1|0:17:14       0|0:29:9        1|0:100:32
+9      3430938 rs12345254      A       G       .       PASS    AA=A;DP=104     GT:GQ:DP        1|0:17:15       1|0:100:20      1|1:100:67
+9      95586346        rs7846827       C       T       .       PASS    AA=C;DP=64      GT:GQ:DP        1|0:17:16       1|0:4:17        1|1:4:20
+22     38159604        rs35351950      C       T       .       PASS    AA=C;DP=91      GT:GQ:DP        1|0:18:21       0|0:44:14       1|0:100:56
+3      174952412       .       C       A       .       PASS    AA=C;DP=109     GT:GQ:DP        1|0:18:26       0|0:18:24       1|0:100:58
+3      108235604       .       A       G       .       PASS    AA=A;DP=74      GT:GQ:DP        1|0:19:14       0|0:4:12        1|0:100:47
+12     95247100        .       G       C       .       PASS    AA=G;DP=77      GT:GQ:DP        1|0:19:21       0|0:50:16       1|0:100:42
+16     4173902 rs4786463       A       C       .       PASS    AA=C;DP=53      GT:GQ:DP        1|0:20:17       1|0:4:8 1|1:73:25
+8      16995685        rs28437270      G       A       .       PASS    AA=A;DP=68      GT:GQ:DP        1|0:21:14       1|0:34:13       1|1:100:43
+12     55611844        rs2629413       G       C       .       PASS    AA=C;DP=106     GT:GQ:DP        1|0:21:23       1|1:48:18       1|1:100:66
+6      30011215        rs2437063       A       C       .       PASS    AA=.;DP=108     GT:GQ:DP        1|0:21:24       0|0:29:20       1|0:77:63
+15     91237493        rs12900342      G       A       .       PASS    AA=A;DP=86      GT:GQ:DP        1|0:22:16       1|1:39:14       1|1:100:56
+21     26303619        .       T       G       .       PASS    AA=G;DP=76      GT:GQ:DP        1|0:22:24       1|1:51:17       1|1:81:27
+6      29873562        .       A       T       .       PASS    AA=.;DP=113     GT:GQ:DP        1|0:22:33       0|0:22:24       1|0:100:50
+X      127008772       rs5932311       T       C       .       PASS    AA=C;DP=59      GT:GQ:DP        1|0:23:12       1|1:3:7 1|1:45:30
+9      132278995       rs7044220       G       A       .       PASS    AA=g;DP=110     GT:GQ:DP        1|0:23:20       0|0:26:19       1|0:100:73
+1      176869803       .       T       C       .       PASS    AA=T;DP=93      GT:GQ:DP        1|0:23:21       0|0:44:14       1|0:100:57
+17     5618510 rs57439944      C       T       .       PASS    AA=T;DP=80      GT:GQ:DP        1|0:23:22       1|1:39:13       1|1:100:46
+6      32656498        rs3830127       C       T       .       PASS    AA=-;DP=214     GT:GQ:DP        1|0:23:46       0|0:18:30       1|0:90:87
+1      18449300        rs223198        G       A       .       PASS    AA=G;DP=109;HM2;HM3     GT:GQ:DP        1|0:24:15       1|1:13:11       1|1:100:38
+13     104059824       rs9519407       T       C       .       PASS    AA=T;DP=110     GT:GQ:DP        1|0:24:21       1|0:100:22      1|1:100:61
+2      44618295        .       C       T       .       PASS    AA=C;DP=92      GT:GQ:DP        1|0:24:24       0|0:32:10       1|0:100:49
+6      150392142       .       C       T       .       PASS    AA=N;DP=124     GT:GQ:DP        1|0:24:24       0|0:53:17       1|0:100:84
+X      68926625        .       A       G       .       PASS    AA=A;DP=106     GT:GQ:DP        1|0:24:9        0|0:24:22       1|0:97:23
+11     105710369       rs680985        C       T       .       PASS    AA=t;DP=54      GT:GQ:DP        1|0:25:15       1|1:34:15       1|1:60:20
+7      55290131        rs13240956      C       G       .       PASS    AA=G;DP=56      GT:GQ:DP        1|0:26:11       0|0:8:10        1|0:95:30
+12     86748058        rs1675588       T       A       .       PASS    AA=C;DP=97      GT:GQ:DP        1|0:27:18       0|0:77:25       1|0:100:54
+15     42943328        .       G       A       .       PASS    AA=G;DP=83      GT:GQ:DP        1|0:27:20       1|1:36:12       1|1:27:41
+3      8728799 rs62242581      C       T       .       PASS    AA=C;DP=116     GT:GQ:DP        1|0:28:24       1|1:28:23       1|1:100:69
+17     76492818        rs4497758       A       G       .       PASS    AA=a;DP=101     GT:GQ:DP        1|0:28:27       0|0:44:15       1|0:100:59
+4      104399410       rs17033498      C       G       .       PASS    AA=G;DP=98      GT:GQ:DP        1|0:29:16       0|0:74:28       1|0:100:54
+16     84784920        .       C       T       .       PASS    AA=C;DP=131     GT:GQ:DP        1|0:29:39       0|0:31:16       1|0:100:75
+2      729963  .       T       C       .       PASS    AA=C;DP=133     GT:GQ:DP        1|0:29:42       0|0:29:17       1|0:100:76
+1      73993311        .       A       T       .       PASS    AA=A;DP=98      GT:GQ:DP        1|0:30:14       0|0:30:23       1|0:100:60
+13     62715142        rs298839        G       C       .       PASS    AA=C;DP=69      GT:GQ:DP        1|0:30:15       1|1:54:18       1|1:63:22
+8      115000877       rs9632818       A       T       .       PASS    AA=A;DP=58      GT:GQ:DP        1|0:31:15       1|0:100:17      1|1:11:19
+8      11179567        .       C       G       .       PASS    AA=C;DP=61      GT:GQ:DP        1|0:31:20       0|0:28:10       1|0:89:23
+1      97263640        rs12133631      C       T       .       PASS    AA=T;DP=126     GT:GQ:DP        1|0:31:27       0|0:89:30       1|0:100:69
+2      6143010 rs6706603       C       T       .       PASS    AA=C;DP=112     GT:GQ:DP        1|0:31:28       0|0:44:15       1|0:100:69
+8      124205023       rs34895889      C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        1|0:31:36       0|0:53:17       1|0:100:54
+12     62528210        .       G       A       .       PASS    AA=G;DP=100     GT:GQ:DP        1|0:32:16       0|0:35:17       1|0:100:68
+5      84480089        rs13157355      C       T       .       PASS    AA=T;DP=114     GT:GQ:DP        1|0:32:20       0|0:71:23       1|0:100:72
+19     44963106        .       G       A       .       PASS    AA=G;DP=94      GT:GQ:DP        1|0:32:23       0|0:29:12       1|0:100:66
+13     86835219        rs61256780      C       A       .       PASS    AA=A;DP=91      GT:GQ:DP        1|0:33:11       1|0:37:22       1|1:100:54
+1      102961885       .       C       T       .       PASS    AA=C;DP=76      GT:GQ:DP        1|0:33:16       0|0:53:18       1|0:100:43
+5      140945712       rs6580191       G       A       .       PASS    AA=G;DP=87      GT:GQ:DP        1|0:33:18       1|1:62:27       1|1:100:35
+14     21925617        rs59670958      A       G       .       PASS    AA=A;DP=138     GT:GQ:DP        1|0:33:25       0|0:68:23       1|0:100:45
+10     38838189        .       A       G       .       PASS    AA=.;DP=149     GT:GQ:DP        1|0:33:37       1|0:100:27      1|1:47:88
+15     66363934        rs59705963      T       G       .       PASS    AA=T;DP=89      GT:GQ:DP        1|0:34:11       0|0:68:23       1|0:100:52
+14     62579614        rs7156008       T       C       .       PASS    AA=C;DP=73      GT:GQ:DP        1|0:34:14       0|0:47:16       1|0:100:45
+4      28359361        rs7696637       G       T       .       PASS    AA=G;DP=92      GT:GQ:DP        1|0:34:14       0|0:53:17       1|0:100:60
+9      96394914        rs2772023       A       G       .       PASS    AA=G;DP=85      GT:GQ:DP        1|0:34:17       0|0:21:17       1|0:96:36
+8      83289123        .       C       T       .       PASS    AA=C;DP=103     GT:GQ:DP        1|0:35:18       0|0:71:23       1|0:100:60
+6      34711281        rs2492862       T       C       .       PASS    AA=T;DP=100     GT:GQ:DP        1|0:35:20       0|0:28:15       1|0:100:66
+13     19135823        rs17085419      G       C       .       PASS    AA=G;DP=117     GT:GQ:DP        1|0:35:20       0|0:38:12       1|0:100:83
+8      73785165        .       C       G       .       PASS    AA=C;DP=90      GT:GQ:DP        1|0:36:16       0|0:36:21       1|0:100:54
+5      177701240       .       C       T       .       PASS    AA=C;DP=85      GT:GQ:DP        1|0:36:18       0|0:38:14       1|0:100:55
+13     25545813        rs9553721       T       C       .       PASS    AA=T;DP=78      GT:GQ:DP        1|0:36:22       0|0:36:20       1|0:97:33
+6      51346149        .       C       T       .       PASS    AA=C;DP=121     GT:GQ:DP        1|0:36:22       1|0:100:25      1|1:100:77
+12     85991700        .       G       A       .       PASS    AA=A;DP=124     GT:GQ:DP        1|0:36:24       0|0:100:41      1|0:100:60
+3      51293881        rs12493323      C       T       .       PASS    AA=c;DP=65      GT:GQ:DP        1|0:37:18       0|0:23:7        1|0:100:30
+10     88711511        .       G       A       .       PASS    AA=g;DP=94      GT:GQ:DP        1|0:37:20       0|0:53:19       1|0:100:41
+9      97586444        rs10983133      G       C       .       PASS    AA=G;DP=78      GT:GQ:DP        1|0:37:21       1|1:21:9        1|1:100:43
+12     2308136 rs7316184       C       T       .       PASS    AA=c;DP=112     GT:GQ:DP        1|0:37:23       1|1:49:21       1|1:100:69
+17     77618541        rs9902502       A       G       .       PASS    AA=G;DP=88      GT:GQ:DP        1|0:37:24       0|0:4:14        1|0:100:36
+8      85622052        rs1503600       A       G       .       PASS    AA=A;DP=84      GT:GQ:DP        1|0:38:21       1|1:39:14       1|1:85:51
+16     2895342 rs28494003      A       T       .       PASS    AA=A;DP=73      GT:GQ:DP        1|0:38:22       0|0:14:4        1|0:100:44
+6      159868258       .       T       C       .       PASS    AA=T;DP=59      GT:GQ:DP        1|0:38:23       1|0:30:11       1|1:38:21
+8      5520234 .       T       C       .       PASS    AA=T;DP=97      GT:GQ:DP        1|0:39:15       1|0:100:25      1|1:100:58
+10     8015079 rs11255449      T       A       .       PASS    AA=t;DP=74      GT:GQ:DP        1|0:39:16       1|0:100:18      1|1:48:29
+10     108811851       rs6584788       A       G       .       PASS    AA=G;DP=86      GT:GQ:DP        1|0:39:16       1|1:45:15       1|1:100:52
+17     12537634        .       G       A       .       PASS    AA=G;DP=73      GT:GQ:DP        1|0:39:21       0|0:33:11       1|0:100:41
+7      88994896        rs11982586      C       T       .       PASS    AA=T;DP=64      GT:GQ:DP        1|0:39:22       1|0:30:15       1|1:57:20
+10     59811543        rs10826176      G       A       .       PASS    AA=G;DP=83      GT:GQ:DP        1|0:39:22       1|1:51:18       1|1:95:43
+11     14154873        .       C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        1|0:39:24       1|0:50:18       1|1:100:66
+6      159062865       rs7738921       G       C       .       PASS    AA=C;DP=95      GT:GQ:DP        1|0:39:24       1|1:39:13       1|1:100:57
+1      68821832        rs10789267      C       T       .       PASS    AA=C;DP=105;HM2 GT:GQ:DP        1|0:39:25       0|0:77:26       1|0:100:54
+7      41728821        .       G       T       .       PASS    AA=G;DP=104     GT:GQ:DP        1|0:39:26       0|0:71:23       1|0:100:55
+2      220069730       rs2010592       G       A       .       PASS    AA=G;DP=102     GT:GQ:DP        1|0:39:31       1|0:62:14       1|1:100:51
+X      86006107        .       G       A       .       PASS    AA=G;DP=100     GT:GQ:DP        1|0:3:13        0|0:82:28       1|0:100:36
+X      153695051       rs5987034       G       C       .       PASS    AA=C;DP=78      GT:GQ:DP        1|0:3:7 0|0:64:21       1|0:100:22
+7      123765094       rs4731166       C       T       .       PASS    AA=T;DP=87      GT:GQ:DP        1|0:40:17       0|0:74:26       1|0:100:43
+6      126207413       rs614031        G       T       .       PASS    AA=T;DP=95      GT:GQ:DP        1|0:40:26       0|0:34:18       1|0:100:51
+13     74037403        rs1536413       A       G       .       PASS    AA=G;DP=79      GT:GQ:DP        1|0:41:11       1|0:77:14       1|1:100:49
+18     61720440        .       G       A       .       PASS    AA=G;DP=101     GT:GQ:DP        1|0:41:12       0|0:71:23       1|0:100:21
+11     23437143        rs16911268      C       A       .       PASS    AA=C;DP=78      GT:GQ:DP        1|0:41:13       0|0:25:13       1|0:100:51
+4      179685392       rs2614624       G       T       .       PASS    AA=a;DP=62      GT:GQ:DP        1|0:41:15       1|0:35:16       1|1:66:23
+3      21422278        rs409972        A       C       .       PASS    AA=a;DP=76      GT:GQ:DP        1|0:41:16       1|0:30:14       1|1:100:40
+12     85241552        rs4378459       G       A       .       PASS    AA=G;DP=86      GT:GQ:DP        1|0:41:20       0|0:53:17       1|0:100:48
+4      133315270       rs17048152      C       T       .       PASS    AA=C;DP=94      GT:GQ:DP        1|0:41:21       0|0:47:15       1|0:100:57
+14     94401108        .       C       A       .       PASS    AA=C;DP=61      GT:GQ:DP        1|0:42:11       0|0:34:11       1|0:100:31
+6      121538525       rs785401        A       C       .       PASS    AA=A;DP=75      GT:GQ:DP        1|0:42:12       0|0:53:18       1|0:100:44
+5      167055324       rs13169909      C       A       .       PASS    AA=A;DP=73      GT:GQ:DP        1|0:42:17       0|0:11:13       1|0:100:43
+3      129610830       rs3749372       G       A       .       PASS    AA=G;DP=110     GT:GQ:DP        1|0:42:17       0|0:53:19       1|0:100:72
+15     53898201        .       G       A       .       PASS    AA=G;DP=119     GT:GQ:DP        1|0:42:22       0|0:42:27       1|0:100:70
+18     73512563        .       C       T       .       PASS    AA=C;DP=89      GT:GQ:DP        1|0:42:22       1|1:43:20       1|1:97:39
+6      77802501        .       C       T       .       PASS    AA=C;DP=106     GT:GQ:DP        1|0:42:24       0|0:47:15       1|0:100:71
+19     18511347        .       G       A       .       PASS    AA=g;DP=87      GT:GQ:DP        1|0:42:27       0|0:18:16       1|0:100:38
+12     7959938 .       A       G       .       PASS    AA=A;DP=62      GT:GQ:DP        1|0:43:12       0|0:35:11       1|0:100:27
+9      95177115        rs4744232       T       A       .       PASS    AA=T;DP=106     GT:GQ:DP        1|0:43:17       0|0:83:27       1|0:100:61
+1      3401826 rs2821034       T       C       .       PASS    AA=C;DP=81;HM2  GT:GQ:DP        1|0:43:22       1|1:39:13       1|1:87:36
+2      221047236       .       G       A       .       PASS    AA=G;DP=101     GT:GQ:DP        1|0:43:23       0|0:59:20       1|0:100:58
+6      168742552       rs58602032      C       T       .       PASS    AA=C;DP=144     GT:GQ:DP        1|0:43:27       0|0:43:20       1|0:100:100
+5      100198236       .       C       A       .       PASS    AA=C;DP=120     GT:GQ:DP        1|0:43:27       0|0:55:20       1|0:100:73
+1      106820811       rs12032417      T       G       .       PASS    AA=T;DP=88      GT:GQ:DP        1|0:43:8        0|0:50:16       1|0:100:65
+5      134625163       rs60965240      C       G       .       PASS    AA=G;DP=90      GT:GQ:DP        1|0:44:16       0|0:74:26       1|0:100:36
+18     70741396        rs724892        G       A       .       PASS    AA=G;DP=106     GT:GQ:DP        1|0:44:16       0|0:92:30       1|0:100:59
+5      83771014        .       G       A       .       PASS    AA=G;DP=99      GT:GQ:DP        1|0:44:18       0|0:47:16       1|0:100:64
+7      14090804        rs57238832      C       A       .       PASS    AA=A;DP=114     GT:GQ:DP        1|0:44:19       0|0:77:26       1|0:100:70
+10     25167740        rs10219142      C       T       .       PASS    AA=t;DP=81      GT:GQ:DP        1|0:44:21       1|1:45:16       1|1:100:45
+2      64868700        rs6732000       G       A       .       PASS    AA=A;DP=114     GT:GQ:DP        1|0:44:24       1|1:57:24       1|1:100:69
+18     37867188        rs61466819      A       T       .       PASS    AA=A;DP=123     GT:GQ:DP        1|0:44:25       0|0:86:30       1|0:100:67
+12     17485117        rs10840716      T       G       .       PASS    AA=T;DP=89      GT:GQ:DP        1|0:44:27       1|1:24:8        1|1:81:54
+2      81652872        rs61271079      T       C       .       PASS    AA=T;DP=113     GT:GQ:DP        1|0:45:12       0|0:45:28       1|0:100:32
+11     126428158       rs9736107       A       C       .       PASS    AA=A;DP=95      GT:GQ:DP        1|0:45:16       0|0:47:16       1|0:100:63
+10     22549443        rs55654426      C       T       .       PASS    AA=C;DP=94      GT:GQ:DP        1|0:45:19       0|0:44:16       1|0:100:59
+4      95109802        rs2618723       C       A       .       PASS    AA=C;DP=108     GT:GQ:DP        1|0:45:22       1|0:100:24      1|1:100:61
+13     63453177        rs61431901      G       C       .       PASS    AA=G;DP=52      GT:GQ:DP        1|0:46:13       0|0:53:17       1|0:100:19
+12     11880694        rs7969473       G       A       .       PASS    AA=G;DP=113     GT:GQ:DP        1|0:46:16       1|1:41:19       1|1:100:80
+12     74184709        rs1604382       T       C       .       PASS    AA=T;DP=96      GT:GQ:DP        1|0:46:19       0|0:40:13       1|0:100:63
+4      189598358       rs420011        T       C       .       PASS    AA=C;DP=76      GT:GQ:DP        1|0:46:21       1|0:73:15       1|1:69:39
+7      2060644 rs7783380       G       A       .       PASS    AA=G;DP=115     GT:GQ:DP        1|0:46:25       0|0:44:14       1|0:100:76
+20     46648076        .       G       T       .       PASS    AA=G;DP=160     GT:GQ:DP        1|0:46:25       0|0:8:18        1|0:100:75
+2      44229552        rs896989        G       A       .       PASS    AA=A;DP=112     GT:GQ:DP        1|0:46:27       0|0:71:23       1|0:100:63
+17     1976984 rs8067895       G       A       .       PASS    AA=A;DP=154     GT:GQ:DP        1|0:46:47       1|1:87:32       1|1:57:74
+16     77477629        .       T       C       .       PASS    AA=T;DP=58      GT:GQ:DP        1|0:47:13       0|0:37:12       1|0:85:21
+13     55394269        rs35021572      A       G       .       PASS    AA=G;DP=65      GT:GQ:DP        1|0:47:14       0|0:50:16       1|0:100:35
+3      83298138        .       G       T       .       PASS    AA=G;DP=76      GT:GQ:DP        1|0:47:19       0|0:56:18       1|0:100:28
+5      2818876 rs6883586       A       G       .       PASS    AA=A;DP=99      GT:GQ:DP        1|0:47:22       0|0:53:17       1|0:100:60
+9      71356441        rs11139300      G       A       .       PASS    AA=g;DP=105     GT:GQ:DP        1|0:47:33       0|0:74:24       1|0:100:50
+4      190234473       rs2047353       T       G       .       PASS    AA=T;DP=81      GT:GQ:DP        1|0:48:14       1|1:22:16       1|1:89:50
+10     57196752        rs1916548       G       A       .       PASS    AA=G;DP=55      GT:GQ:DP        1|0:48:21       1|1:27:10       1|1:57:19
+21     35593684        rs9636896       C       T       .       PASS    AA=T;DP=112     GT:GQ:DP        1|0:48:23       1|1:60:20       1|1:100:68
+1      244097783       rs10737776      C       T       .       PASS    AA=c;DP=125;HM2 GT:GQ:DP        1|0:48:38       1|1:38:24       1|1:100:63
+7      157244233       rs59648093      C       T       .       PASS    AA=T;DP=92      GT:GQ:DP        1|0:49:10       0|0:53:18       1|0:100:66
+10     28548004        rs12255835      T       C       .       PASS    AA=T;DP=66      GT:GQ:DP        1|0:49:10       1|0:100:28      1|1:49:28
+14     81040583        rs28368671      A       T       .       PASS    AA=A;DP=62      GT:GQ:DP        1|0:49:11       0|0:5:22        1|0:100:25
+6      75590101        rs4083898       C       T       .       PASS    AA=T;DP=51      GT:GQ:DP        1|0:49:11       1|1:48:17       1|1:63:21
+7      110408079       rs17837487      A       G       .       PASS    AA=A;DP=94      GT:GQ:DP        1|0:49:13       0|0:77:25       1|0:100:58
+18     63126247        rs2333669       T       C       .       PASS    AA=t;DP=83      GT:GQ:DP        1|0:49:15       0|0:40:13       1|0:100:54
+3      104461009       rs16846083      G       A       .       PASS    AA=g;DP=105     GT:GQ:DP        1|0:49:15       0|0:50:20       1|0:100:70
+16     78491566        .       C       A       .       PASS    AA=C;DP=90      GT:GQ:DP        1|0:49:17       0|0:56:19       1|0:100:50
+4      187909150       rs11729956      C       A       .       PASS    AA=A;DP=99      GT:GQ:DP        1|0:49:20       1|0:100:35      1|1:93:32
+2      121401133       rs6745937       C       G       .       PASS    AA=C;DP=111     GT:GQ:DP        1|0:49:22       0|0:38:12       1|0:100:76
+4      190664668       rs4863185       G       C       .       PASS    AA=C;DP=81      GT:GQ:DP        1|0:49:24       0|0:21:14       1|0:100:44
+1      20875200        rs10916848      C       T       .       PASS    AA=t;DP=98;HM2;HM3      GT:GQ:DP        1|0:49:27       0|0:71:23       1|0:100:47
+16     77531330        rs12596126      G       A       .       PASS    AA=A;DP=98      GT:GQ:DP        1|0:49:29       1|1:57:19       1|1:100:51
+5      34078623        .       A       C       .       PASS    AA=A;DP=137     GT:GQ:DP        1|0:49:36       0|0:49:27       1|0:100:73
+5      10386589        .       G       A       .       PASS    AA=G;DP=71      GT:GQ:DP        1|0:4:27        0|0:10:13       1|0:71:23
+6      133493169       rs9389050       T       G       .       PASS    AA=G;DP=81      GT:GQ:DP        1|0:4:29        1|0:72:17       1|1:35:30
+22     42821571        rs2076508       C       T       .       PASS    AA=T;DP=97      GT:GQ:DP        1|0:4:30        1|0:35:25       1|1:35:36
+3      194277118       rs58065172      A       G       .       PASS    AA=A;DP=60      GT:GQ:DP        1|0:50:11       0|0:44:14       1|0:100:20
+7      146811396       rs7800366       A       G       .       PASS    AA=G;DP=85      GT:GQ:DP        1|0:50:13       1|1:48:16       1|1:100:55
+4      103792952       rs228632        C       T       .       PASS    AA=T;DP=70      GT:GQ:DP        1|0:50:15       1|1:39:13       1|1:67:40
+21     45243794        .       C       G       .       PASS    AA=C;DP=69      GT:GQ:DP        1|0:50:21       0|0:20:6        1|0:80:33
+7      155783496       .       C       T       .       PASS    AA=C;DP=102     GT:GQ:DP        1|0:50:24       0|0:62:21       1|0:100:57
+3      184648620       .       A       C       .       PASS    AA=A;DP=123     GT:GQ:DP        1|0:50:27       0|0:64:26       1|0:100:69
+5      22378801        rs12697602      G       A       .       PASS    AA=G;DP=115     GT:GQ:DP        1|0:50:27       0|0:86:30       1|0:100:58
+22     47612682        rs36068562      A       G       .       PASS    AA=G;DP=76      GT:GQ:DP        1|0:50:27       1|1:33:13       1|1:27:40
+5      17194484        rs6859179       C       G       .       PASS    AA=C;DP=104     GT:GQ:DP        1|0:50:32       0|0:68:22       1|0:100:40
+17     22313514        rs62056417      T       C       .       PASS    AA=.;DP=189     GT:GQ:DP        1|0:50:38       0|0:22:26       1|0:86:101
+5      93689918        rs13180222      A       G       .       PASS    AA=A;DP=87      GT:GQ:DP        1|0:51:13       0|0:62:20       1|0:100:55
+16     51815775        .       G       A       .       PASS    AA=G;DP=100     GT:GQ:DP        1|0:51:14       0|0:74:24       1|0:100:63
+5      3593746 rs2455372       A       G       .       PASS    AA=G;DP=133     GT:GQ:DP        1|0:51:15       1|0:89:29       1|1:100:87
+1      224698077       rs11578747      T       C       .       PASS    AA=C;DP=118     GT:GQ:DP        1|0:51:16       1|0:100:32      1|1:100:69
+22     25084045        rs16981890      A       G       .       PASS    AA=A;DP=95      GT:GQ:DP        1|0:51:17       0|0:53:18       1|0:100:57
+20     24932281        rs6050243       T       C       .       PASS    AA=T;DP=94      GT:GQ:DP        1|0:51:17       1|0:100:22      1|1:100:55
+1      14465764        rs10803478      G       A       .       PASS    AA=G;DP=114;HM2;HM3     GT:GQ:DP        1|0:51:20       0|0:62:20       1|0:100:72
+14     104166593       rs59219802      G       A       .       PASS    AA=G;DP=118     GT:GQ:DP        1|0:51:31       0|0:68:22       1|0:100:64
+16     87632979        rs11866392      G       C       .       PASS    AA=C;DP=110     GT:GQ:DP        1|0:51:35       1|1:36:12       1|1:100:64
+7      148741591       rs1619237       G       A       .       PASS    AA=G;DP=70      GT:GQ:DP        1|0:52:12       0|0:29:21       1|0:100:37
+21     40996830        rs2410287       T       A       .       PASS    AA=A;DP=55      GT:GQ:DP        1|0:52:12       0|0:53:17       1|0:100:21
+9      649656  rs59521969      C       T       .       PASS    AA=C;DP=90      GT:GQ:DP        1|0:52:13       0|0:33:17       1|0:100:59
+10     69457897        rs1191993       C       A       .       PASS    AA=A;DP=83      GT:GQ:DP        1|0:52:16       0|0:62:20       1|0:100:49
+1      109078793       rs1277018       A       G       .       PASS    AA=A;DP=75      GT:GQ:DP        1|0:52:16       0|0:9:13        1|0:100:47
+3      36390343        rs28433550      C       G       .       PASS    AA=-;DP=79      GT:GQ:DP        1|0:52:17       1|1:7:12        1|1:70:51
+10     117287406       rs1572403       G       C       .       PASS    AA=g;DP=91      GT:GQ:DP        1|0:52:21       1|1:33:11       1|1:100:59
+14     57704642        rs7147871       C       T       .       PASS    AA=c;DP=137     GT:GQ:DP        1|0:52:25       0|0:65:24       1|0:100:49
+8      127647209       rs57907105      A       G       .       PASS    AA=G;DP=124     GT:GQ:DP        1|0:52:25       0|0:74:28       1|0:100:70
+8      106506564       .       G       A       .       PASS    AA=G;DP=121     GT:GQ:DP        1|0:52:28       0|0:76:27       1|0:100:65
+16     17565545        rs4528555       C       T       .       PASS    AA=C;DP=125     GT:GQ:DP        1|0:52:39       0|0:62:21       1|0:100:65
+16     26394582        rs56738698      G       C       .       PASS    AA=G;DP=90      GT:GQ:DP        1|0:53:11       0|0:47:17       1|0:100:62
+3      86899121        rs58758284      T       C       .       PASS    AA=C;DP=101     GT:GQ:DP        1|0:53:12       0|0:44:14       1|0:100:76
+7      20476540        rs10241931      C       T       .       PASS    AA=T;DP=61      GT:GQ:DP        1|0:53:12       0|0:47:16       1|0:100:32
+11     93672958        rs61907584      G       A       .       PASS    AA=G;DP=108     GT:GQ:DP        1|0:53:14       0|0:95:33       1|0:100:61
+14     48192575        rs6572505       T       A       .       PASS    AA=A;DP=60      GT:GQ:DP        1|0:53:14       1|0:100:20      1|1:57:20
+9      134815937       .       A       G       .       PASS    AA=A;DP=61      GT:GQ:DP        1|0:53:17       0|0:41:14       1|0:95:22
+8      114944991       rs16885238      G       T       .       PASS    AA=G;DP=80      GT:GQ:DP        1|0:53:17       1|0:100:19      1|1:100:45
+7      12224491        rs3887296       A       G       .       PASS    AA=A;DP=98      GT:GQ:DP        1|0:53:19       0|0:71:23       1|0:100:58
+15     58716313        .       T       G       .       PASS    AA=T;DP=80      GT:GQ:DP        1|0:53:21       0|0:35:11       1|0:100:45
+7      39243859        .       C       T       .       PASS    AA=C;DP=112     GT:GQ:DP        1|0:53:22       0|0:77:26       1|0:100:66
+2      137767020       rs60548099      G       A       .       PASS    AA=g;DP=116     GT:GQ:DP        1|0:53:28       0|0:59:20       1|0:100:70
+3      38399441        rs485043        A       G       .       PASS    AA=A;DP=110     GT:GQ:DP        1|0:53:28       1|0:100:27      1|1:100:48
+7      52719323        rs6952228       G       T       .       PASS    AA=G;DP=135     GT:GQ:DP        1|0:53:29       1|1:100:35      1|1:100:71
+11     127188877       rs7945680       G       T       .       PASS    AA=T;DP=120     GT:GQ:DP        1|0:53:33       1|1:72:25       1|1:100:62
+1      183013272       rs861604        C       A       .       PASS    AA=C;DP=113;HM2 GT:GQ:DP        1|0:53:36       0|0:32:20       1|0:100:59
+15     84637299        rs61472468      A       G       .       PASS    AA=A;DP=80      GT:GQ:DP        1|0:54:17       0|0:44:15       1|0:100:48
+6      88004062        .       A       G       .       PASS    AA=A;DP=92      GT:GQ:DP        1|0:54:18       1|1:48:19       1|1:100:54
+2      53211937        .       A       G       .       PASS    AA=G;DP=78      GT:GQ:DP        1|0:54:19       0|0:32:11       1|0:100:44
+8      52564965        rs4873195       C       T       .       PASS    AA=T;DP=108     GT:GQ:DP        1|0:54:19       0|0:56:18       1|0:100:66
+14     72825979        rs177375        T       C       .       PASS    AA=C;DP=75      GT:GQ:DP        1|0:54:19       1|1:48:16       1|1:87:29
+5      542839  rs10076162      T       G       .       PASS    AA=T;DP=90      GT:GQ:DP        1|0:54:20       0|0:25:13       1|0:100:55
+12     39370712        rs7972371       G       A       .       PASS    AA=G;DP=101     GT:GQ:DP        1|0:54:20       0|0:33:30       1|0:100:52
+3      191271898       rs60764902      A       G       .       PASS    AA=A;DP=99      GT:GQ:DP        1|0:54:20       0|0:41:13       1|0:100:66
+1      84786918        .       G       A       .       PASS    AA=G;DP=90      GT:GQ:DP        1|0:54:21       0|0:56:19       1|0:100:50
+8      18473856        rs7018369       C       A       .       PASS    AA=C;DP=118     GT:GQ:DP        1|0:54:22       0|0:86:28       1|0:100:66
+10     115151854       rs4918816       C       T       .       PASS    AA=T;DP=117     GT:GQ:DP        1|0:54:24       1|0:52:14       1|1:100:79
+6      35998726        .       C       T       .       PASS    AA=C;DP=149     GT:GQ:DP        1|0:54:25       0|0:83:27       1|0:100:45
+10     132616635       rs1122719       G       C       .       PASS    AA=C;DP=103     GT:GQ:DP        1|0:54:25       1|0:100:17      1|1:97:58
+1      11443564        rs11121744      T       G       .       PASS    AA=G;DP=97      GT:GQ:DP        1|0:54:25       1|1:57:19       1|1:100:55
+14     103702806       .       C       T       .       PASS    AA=c;DP=118     GT:GQ:DP        1|0:54:26       0|0:47:16       1|0:100:76
+2      193346132       rs9808472       A       T       .       PASS    AA=A;DP=128     GT:GQ:DP        1|0:54:26       1|1:81:29       1|1:100:68
+17     66280843        rs16976237      C       T       .       PASS    AA=C;DP=118     GT:GQ:DP        1|0:54:28       0|0:53:18       1|0:100:71
+14     99400838        rs28610890      T       G       .       PASS    AA=G;DP=108     GT:GQ:DP        1|0:54:28       0|0:7:15        1|0:100:65
+4      6495083 rs9991896       G       T       .       PASS    AA=G;DP=117     GT:GQ:DP        1|0:54:30       0|0:50:16       1|0:100:52
+5      51628093        rs1559577       G       T       .       PASS    AA=G;DP=76      GT:GQ:DP        1|0:55:13       0|0:56:18       1|0:100:45
+3      46862477        .       C       G       .       PASS    AA=c;DP=53      GT:GQ:DP        1|0:55:14       0|0:14:4        1|0:100:29
+20     22141523        rs961157        A       G       .       PASS    AA=A;DP=74      GT:GQ:DP        1|0:55:19       0|0:38:12       1|0:100:44
+5      111753447       .       G       C       .       PASS    AA=G;DP=120     GT:GQ:DP        1|0:55:20       0|0:80:26       1|0:100:76
+21     44061019        rs55896634      G       T       .       PASS    AA=G;DP=72      GT:GQ:DP        1|0:55:28       1|0:20:7        1|1:9:35
+14     25691342        rs17110807      T       C       .       PASS    AA=T;DP=101     GT:GQ:DP        1|0:56:14       0|0:62:21       1|0:100:67
+7      5138808 .       A       G       .       PASS    AA=G;DP=89      GT:GQ:DP        1|0:56:16       0|0:29:18       1|0:100:55
+19     9026420 .       C       G       .       PASS    AA=.;DP=68      GT:GQ:DP        1|0:56:17       0|0:20:12       1|0:100:29
+12     11319419        rs1965071       A       G       .       PASS    AA=G;DP=83      GT:GQ:DP        1|0:56:20       0|0:5:25        1|0:100:28
+8      36460295        rs7004944       G       A       .       PASS    AA=G;DP=121     GT:GQ:DP        1|0:56:23       0|0:43:25       1|0:100:72
+14     64482526        rs10121 G       A       .       PASS    AA=G;DP=107     GT:GQ:DP        1|0:56:28       0|0:62:20       1|0:100:60
+1      224103467       rs184852        T       C       .       PASS    AA=T;DP=83      GT:GQ:DP        1|0:56:28       1|0:45:14       1|1:93:32
+8      29079348        .       T       C       .       PASS    AA=T;DP=130     GT:GQ:DP        1|0:56:32       0|0:89:29       1|0:74:71
+19     43411249        .       A       G       .       PASS    AA=a;DP=66      GT:GQ:DP        1|0:57:13       0|0:26:9        1|0:100:44
+4      61675064        rs9996953       A       G       .       PASS    AA=A;DP=76      GT:GQ:DP        1|0:57:16       0|0:47:17       1|0:100:43
+13     61050071        .       A       G       .       PASS    AA=A;DP=101     GT:GQ:DP        1|0:57:17       0|0:100:34      1|0:100:40
+2      113461795       .       C       T       .       PASS    AA=C;DP=94      GT:GQ:DP        1|0:57:19       0|0:56:19       1|0:100:58
+2      1576910 rs34919091      G       A       .       PASS    AA=N;DP=128     GT:GQ:DP        1|0:57:20       0|0:83:28       1|0:100:38
+21     21855442        .       T       A       .       PASS    AA=A;DP=117     GT:GQ:DP        1|0:57:21       0|0:77:25       1|0:100:75
+10     68209537        rs7905441       C       A       .       PASS    AA=C;DP=105     GT:GQ:DP        1|0:57:23       0|0:41:22       1|0:100:62
+17     26469212        rs12949024      A       T       .       PASS    AA=T;DP=82      GT:GQ:DP        1|0:57:23       1|0:100:17      1|1:31:42
+19     407302  rs56398868      T       C       .       PASS    AA=N;DP=77      GT:GQ:DP        1|0:57:24       1|1:15:5        1|1:100:45
+11     2519690 .       G       A       .       PASS    AA=G;DP=105     GT:GQ:DP        1|0:57:27       0|0:20:6        1|0:100:68
+13     82737757        rs1398460       C       T       .       PASS    AA=C;DP=97      GT:GQ:DP        1|0:57:27       0|0:83:27       1|0:100:31
+9      11085289        .       C       T       .       PASS    AA=C;DP=80      GT:GQ:DP        1|0:58:17       0|0:7:10        1|0:100:51
+2      125111030       .       C       T       .       PASS    AA=C;DP=88      GT:GQ:DP        1|0:58:19       0|0:44:14       1|0:100:56
+1      46782386        rs1258031       A       G       .       PASS    AA=G;DP=62      GT:GQ:DP        1|0:58:20       0|0:17:5        1|0:58:31
+13     75576567        rs9565240       G       A       .       PASS    AA=G;DP=101     GT:GQ:DP        1|0:58:20       1|0:91:25       1|1:100:54
+17     67538155        rs759497        G       A       .       PASS    AA=G;DP=116     GT:GQ:DP        1|0:58:21       0|0:51:25       1|0:100:71
+4      141070440       rs812752        C       T       .       PASS    AA=T;DP=139     GT:GQ:DP        1|0:58:25       1|1:54:19       1|1:100:93
+10     30959689        .       G       A       .       PASS    AA=G;DP=110     GT:GQ:DP        1|0:58:27       1|0:100:24      1|1:100:62
+1      155103591       rs11264577      A       G       .       PASS    AA=G;DP=125;HM2;HM3     GT:GQ:DP        1|0:58:30       1|0:100:21      1|1:100:72
+11     41620395        rs1463070       G       A       .       PASS    AA=G;DP=126     GT:GQ:DP        1|0:58:32       1|0:99:17       1|1:100:76
+7      81846940        rs2040976       C       T       .       PASS    AA=C;DP=60      GT:GQ:DP        1|0:59:13       1|1:45:17       1|1:57:19
+2      24547437        rs13029685      C       T       .       PASS    AA=C;DP=65      GT:GQ:DP        1|0:59:14       0|0:23:7        1|0:100:44
+1      185529741       rs28804778      A       G       .       PASS    AA=A;DP=105     GT:GQ:DP        1|0:59:14       0|0:51:23       1|0:100:68
+4      138707503       rs12643991      A       G       .       PASS    AA=A;DP=83      GT:GQ:DP        1|0:59:15       0|0:54:18       1|0:100:49
+14     86607249        rs11159800      A       G       .       PASS    AA=A;DP=91      GT:GQ:DP        1|0:59:15       1|1:34:18       1|1:100:59
+13     57751546        rs9597704       A       G       .       PASS    AA=A;DP=85      GT:GQ:DP        1|0:59:16       0|0:68:22       1|0:100:47
+1      150024936       rs11204888      A       G       .       PASS    AA=A;DP=100     GT:GQ:DP        1|0:59:18       0|0:47:15       1|0:100:64
+12     93822806        rs10777652      C       A       .       PASS    AA=A;DP=110     GT:GQ:DP        1|0:59:18       1|0:100:20      1|1:100:71
+15     45564602        .       T       A       .       PASS    AA=T;DP=92      GT:GQ:DP        1|0:59:19       0|0:74:24       1|0:100:50
+8      109213159       .       G       A       .       PASS    AA=G;DP=124     GT:GQ:DP        1|0:59:20       0|0:52:17       1|0:100:86
+20     52915651        rs2137224       G       A       .       PASS    AA=A;DP=102     GT:GQ:DP        1|0:59:22       0|0:68:22       1|0:100:58
+2      203414775       rs4675300       G       C       .       PASS    AA=G;DP=104     GT:GQ:DP        1|0:59:22       1|0:100:22      1|1:100:59
+1      54387727        rs682159        G       A       .       PASS    AA=A;DP=128;HM2 GT:GQ:DP        1|0:59:23       1|0:100:28      1|1:100:78
+2      208515185       rs1115792       G       T       .       PASS    AA=G;DP=108     GT:GQ:DP        1|0:59:24       0|0:29:20       1|0:100:64
+7      110099153       rs9656170       G       A       .       PASS    AA=A;DP=114     GT:GQ:DP        1|0:59:29       1|1:57:19       1|1:100:70
+6      160338054       .       A       C       .       PASS    AA=C;DP=123     GT:GQ:DP        1|0:59:30       0|0:23:17       1|0:100:76
+3      160553041       .       A       G       .       PASS    AA=A;DP=122     GT:GQ:DP        1|0:59:30       0|0:59:21       1|0:100:72
+X      13859284        rs5980002       T       C       .       PASS    AA=C;DP=82      GT:GQ:DP        1|0:5:13        0|0:70:23       1|0:100:33
+3      7632024 rs17047724      G       A       .       PASS    AA=G;DP=78      GT:GQ:DP        1|0:5:14        0|0:40:13       1|0:100:51
+6      29980848        rs3094167       A       G       .       PASS    AA=.;DP=148     GT:GQ:DP        1|0:5:36        1|0:14:27       1|1:25:86
+7      64918818        .       C       T       .       PASS    AA=.;DP=179     GT:GQ:DP        1|0:5:43        0|0:5:25        1|0:100:66
+8      88340241        rs11985778      C       T       .       PASS    AA=T;DP=84      GT:GQ:DP        1|0:60:13       0|0:17:19       1|0:100:51
+14     84478318        .       C       T       .       PASS    AA=C;DP=63      GT:GQ:DP        1|0:60:14       0|0:44:14       1|0:87:28
+2      57178481        rs34722958      G       A       .       PASS    AA=A;DP=67      GT:GQ:DP        1|0:60:14       1|0:80:12       1|1:81:29
+15     57580250        rs59525288      C       G       .       PASS    AA=C;DP=102     GT:GQ:DP        1|0:60:18       1|0:100:17      1|1:100:71
+1      157101855       rs2518498       T       C       .       PASS    AA=t;DP=98      GT:GQ:DP        1|0:60:20       0|0:5:21        1|0:100:56
+10     4944952 rs4491123       G       A       .       PASS    AA=A;DP=97      GT:GQ:DP        1|0:60:20       1|1:60:20       1|1:100:56
+2      133063603       .       G       C       .       PASS    AA=G;DP=117     GT:GQ:DP        1|0:60:22       0|0:40:18       1|0:100:80
+3      84496887        .       T       C       .       PASS    AA=T;DP=109     GT:GQ:DP        1|0:60:23       0|0:62:21       1|0:100:65
+11     100082162       rs4754695       G       A       .       PASS    AA=A;DP=143     GT:GQ:DP        1|0:60:27       1|1:55:25       1|1:100:92
+2      164544155       rs165227        T       G       .       PASS    AA=G;DP=104     GT:GQ:DP        1|0:60:30       0|0:60:24       1|0:100:50
+7      80956422        .       A       T       .       PASS    AA=A;DP=72      GT:GQ:DP        1|0:61:13       1|0:100:19      1|1:72:25
+11     90801031        .       A       T       .       PASS    AA=A;DP=87      GT:GQ:DP        1|0:61:15       0|0:32:21       1|0:100:54
+18     35296099        rs1788940       G       C       .       PASS    AA=C;DP=76      GT:GQ:DP        1|0:61:16       0|0:35:11       1|0:100:50
+3      88941624        .       C       T       .       PASS    AA=C;DP=104     GT:GQ:DP        1|0:61:16       0|0:56:19       1|0:100:68
+22     41134386        rs58144320      T       G       .       PASS    AA=t;DP=89      GT:GQ:DP        1|0:61:16       1|0:61:13       1|1:100:37
+22     16034883        rs12170243      C       T       .       PASS    AA=-;DP=96      GT:GQ:DP        1|0:61:17       0|0:44:16       1|0:100:65
+2      193804328       .       T       A       .       PASS    AA=T;DP=116     GT:GQ:DP        1|0:61:18       0|0:50:17       1|0:100:40
+6      119832769       rs2066353       C       A       .       PASS    AA=A;DP=85      GT:GQ:DP        1|0:61:18       1|1:51:18       1|1:100:45
+8      121250285       .       G       A       .       PASS    AA=g;DP=90      GT:GQ:DP        1|0:61:21       0|0:34:16       1|0:100:51
+13     29018025        rs280950        T       C       .       PASS    AA=C;DP=106     GT:GQ:DP        1|0:61:21       1|1:66:22       1|1:100:64
+3      125102110       .       G       A       .       PASS    AA=g;DP=122     GT:GQ:DP        1|0:61:28       0|0:50:17       1|0:100:66
+5      168791229       rs55752502      C       T       .       PASS    AA=C;DP=146     GT:GQ:DP        1|0:61:29       0|0:47:16       1|0:100:94
+8      50633080        .       C       T       .       PASS    AA=.;DP=122     GT:GQ:DP        1|0:62:14       0|0:100:34      1|0:100:77
+3      36593856        rs11914367      C       T       .       PASS    AA=c;DP=87      GT:GQ:DP        1|0:62:14       1|0:100:25      1|1:96:48
+7      49281177        .       C       T       .       PASS    AA=c;DP=74      GT:GQ:DP        1|0:62:18       0|0:44:14       1|0:100:42
+12     66367917        rs7955884       C       G       .       PASS    AA=G;DP=90      GT:GQ:DP        1|0:62:19       1|0:100:22      1|1:100:40
+3      107070535       rs7649466       C       G       .       PASS    AA=C;DP=77      GT:GQ:DP        1|0:62:21       1|0:44:10       1|1:70:47
+10     5266343 rs928582        C       T       .       PASS    AA=c;DP=144     GT:GQ:DP        1|0:62:23       1|0:100:24      1|1:100:97
+1      4421881 .       C       T       .       PASS    AA=c;DP=97      GT:GQ:DP        1|0:62:24       0|0:47:16       1|0:100:58
+5      166448053       .       T       C       .       PASS    AA=T;DP=96      GT:GQ:DP        1|0:62:26       0|0:53:17       1|0:100:49
+1      69957633        rs11799793      A       C       .       PASS    AA=A;DP=104     GT:GQ:DP        1|0:62:26       1|1:50:28       1|1:71:49
+8      133831612       rs2433061       C       T       .       PASS    AA=C;DP=146     GT:GQ:DP        1|0:62:28       0|0:52:23       1|0:100:55
+17     10682926        rs60276706      C       T       .       PASS    AA=C;DP=122     GT:GQ:DP        1|0:62:28       1|0:65:16       1|1:100:80
+3      75527870        rs11705831      C       T       .       PASS    AA=.;DP=59      GT:GQ:DP        1|0:63:12       1|0:4:2 1|1:75:41
+16     67052554        rs11075678      C       G       .       PASS    AA=G;DP=112     GT:GQ:DP        1|0:63:13       1|1:87:29       1|1:100:70
+7      93531374        rs59485196      A       T       .       PASS    AA=A;DP=103     GT:GQ:DP        1|0:63:14       0|0:59:19       1|0:100:72
+5      4931024 rs56128967      T       C       .       PASS    AA=T;DP=75      GT:GQ:DP        1|0:63:15       1|1:54:18       1|1:74:31
+5      94685470        rs7737930       A       G       .       PASS    AA=A;DP=86      GT:GQ:DP        1|0:63:16       0|0:56:18       1|0:100:49
+3      104149130       rs9830777       G       A       .       PASS    AA=G;DP=75      GT:GQ:DP        1|0:63:16       1|0:63:18       1|1:100:42
+1      188079536       .       C       T       .       PASS    AA=C;DP=85      GT:GQ:DP        1|0:63:18       1|0:98:20       1|1:78:35
+3      84018565        .       C       A       .       PASS    AA=A;DP=84      GT:GQ:DP        1|0:63:19       0|0:32:21       1|0:100:32
+11     16552339        rs12800576      C       T       .       PASS    AA=C;DP=84      GT:GQ:DP        1|0:63:21       0|0:38:13       1|0:100:50
+4      59897739        rs11940449      G       C       .       PASS    AA=g;DP=101     GT:GQ:DP        1|0:63:21       1|1:51:17       1|1:100:64
+15     65215068        rs4147358       C       A       .       PASS    AA=C;DP=119     GT:GQ:DP        1|0:63:23       0|0:56:18       1|0:100:79
+1      81036900        rs1538261       C       A       .       PASS    AA=C;DP=97      GT:GQ:DP        1|0:63:23       0|0:65:21       1|0:100:53
+13     43823771        rs7996227       G       A       .       PASS    AA=G;DP=127     GT:GQ:DP        1|0:63:24       0|0:65:23       1|0:100:67
+5      143325293       rs10515528      C       T       .       PASS    AA=C;DP=130     GT:GQ:DP        1|0:63:24       1|0:97:29       1|1:100:36
+6      135128326       rs1321502       T       C       .       PASS    AA=T;DP=132     GT:GQ:DP        1|0:63:27       0|0:89:29       1|0:100:76
+19     52397123        rs10424953      G       A       .       PASS    AA=G;DP=121     GT:GQ:DP        1|0:63:29       0|0:56:18       1|0:100:74
+10     18478561        rs11012812      A       G       .       PASS    AA=A;DP=83      GT:GQ:DP        1|0:64:10       0|0:53:17       1|0:100:51
+8      51129077        rs10098450      G       C       .       PASS    AA=G;DP=130     GT:GQ:DP        1|0:64:16       0|0:74:26       1|0:100:46
+19     51491754        rs3810301       G       A       .       PASS    AA=N;DP=86      GT:GQ:DP        1|0:64:16       1|0:100:14      1|1:100:56
+11     37967032        rs12286000      T       C       .       PASS    AA=t;DP=75      GT:GQ:DP        1|0:64:19       1|1:45:16       1|1:46:37
+5      20471854        .       T       C       .       PASS    AA=T;DP=97      GT:GQ:DP        1|0:64:21       0|0:24:18       1|0:100:57
+13     23014611        rs4255633       T       C       .       PASS    AA=t;DP=75      GT:GQ:DP        1|0:64:22       1|1:60:20       1|1:78:26
+3      97855917        rs60975761      T       G       .       PASS    AA=C;DP=71      GT:GQ:DP        1|0:64:23       0|0:23:7        1|0:99:38
+17     57377665        .       G       A       .       PASS    AA=G;DP=110     GT:GQ:DP        1|0:64:27       0|0:59:19       1|0:100:63
+13     108769575       rs9521310       C       T       .       PASS    AA=C;DP=103     GT:GQ:DP        1|0:64:30       0|0:41:14       1|0:100:56
+3      90045345        rs1915736       A       C       .       PASS    AA=C;DP=70      GT:GQ:DP        1|0:64:9        0|0:50:16       1|0:100:42
+9      135753730       rs2492053       G       C       .       PASS    AA=C;DP=53      GT:GQ:DP        1|0:65:14       1|1:15:5        1|1:62:31
+18     36333965        .       C       G       .       PASS    AA=C;DP=87      GT:GQ:DP        1|0:65:15       0|0:41:13       1|0:100:45
+18     25658764        .       T       G       .       PASS    AA=T;DP=75      GT:GQ:DP        1|0:65:15       0|0:53:19       1|0:100:31
+1      158334692       rs12046504      A       C       .       PASS    AA=N;DP=64      GT:GQ:DP        1|0:65:15       1|0:68:12       1|1:61:33
+4      134945703       rs10012276      G       T       .       PASS    AA=T;DP=88      GT:GQ:DP        1|0:65:16       0|0:46:20       1|0:100:52
+4      118844417       rs17865505      T       C       .       PASS    AA=C;DP=76      GT:GQ:DP        1|0:65:17       0|0:29:10       1|0:100:49
+2      325325  rs57701070      C       A       .       PASS    AA=C;DP=88      GT:GQ:DP        1|0:65:17       1|0:56:20       1|1:97:52
+8      41630314        rs543817        A       C       .       PASS    AA=C;DP=70      GT:GQ:DP        1|0:65:17       1|1:42:14       1|1:81:28
+11     40726934        rs4500476       G       A       .       PASS    AA=A;DP=73      GT:GQ:DP        1|0:65:18       1|1:42:14       1|1:91:42
+15     91754796        .       C       T       .       PASS    AA=C;DP=67      GT:GQ:DP        1|0:65:19       0|0:33:15       1|0:100:27
+18     2984797 rs1539793       C       G       .       PASS    AA=N;DP=89      GT:GQ:DP        1|0:65:20       1|1:51:18       1|1:60:50
+5      147740043       rs7725787       C       A       .       PASS    AA=C;DP=113     GT:GQ:DP        1|0:65:21       0|0:43:25       1|0:100:70
+10     3137975 rs2388572       G       A       .       PASS    AA=G;DP=101     GT:GQ:DP        1|0:65:21       0|0:60:22       1|0:100:57
+1      173943492       .       C       T       .       PASS    AA=c;DP=97      GT:GQ:DP        1|0:65:22       0|0:41:13       1|0:100:63
+8      74463165        rs4738334       C       G       .       PASS    AA=c;DP=95      GT:GQ:DP        1|0:65:22       1|0:100:21      1|1:100:51
+2      127284792       rs35917680      C       G       .       PASS    AA=G;DP=135     GT:GQ:DP        1|0:65:22       1|0:100:33      1|1:100:81
+2      142156950       rs6736591       T       C       .       PASS    AA=T;DP=108     GT:GQ:DP        1|0:65:23       0|0:68:22       1|0:100:54
+3      138244190       .       A       G       .       PASS    AA=A;DP=120     GT:GQ:DP        1|0:65:24       0|0:83:27       1|0:100:63
+7      152733966       .       G       A       .       PASS    AA=.;DP=95      GT:GQ:DP        1|0:65:26       0|0:71:23       1|0:100:39
+6      117251618       rs7756165       A       G       .       PASS    AA=G;DP=90      GT:GQ:DP        1|0:65:26       1|0:100:17      1|1:100:36
+20     61261047        .       C       T       .       PASS    AA=C;DP=126     GT:GQ:DP        1|0:65:31       0|0:23:12       1|0:100:84
+10     20917708        rs10764253      G       C       .       PASS    AA=C;DP=79      GT:GQ:DP        1|0:66:11       1|1:48:16       1|1:100:50
+4      158182662       .       T       G       .       PASS    AA=T;DP=64      GT:GQ:DP        1|0:66:14       1|0:100:19      1|1:63:22
+7      85188555        rs10279836      T       G       .       PASS    AA=G;DP=106     GT:GQ:DP        1|0:66:15       1|0:100:25      1|1:100:69
+5      18976986        .       A       T       .       PASS    AA=A;DP=82      GT:GQ:DP        1|0:66:18       0|0:47:15       1|0:100:49
+8      87546764        .       T       G       .       PASS    AA=T;DP=112     GT:GQ:DP        1|0:66:20       0|0:55:18       1|0:100:71
+10     114040233       .       G       C       .       PASS    AA=G;DP=117     GT:GQ:DP        1|0:66:20       0|0:55:19       1|0:100:76
+1      240777812       .       T       C       .       PASS    AA=T;DP=72      GT:GQ:DP        1|0:66:20       0|0:55:19       1|0:99:25
+9      80933756        .       C       G       .       PASS    AA=C;DP=127     GT:GQ:DP        1|0:66:24       0|0:74:26       1|0:100:76
+10     88640340        rs12259628      T       A       .       PASS    AA=a;DP=73      GT:GQ:DP        1|0:66:24       1|0:75:12       1|1:51:35
+5      14278689        rs245449        C       A       .       PASS    AA=C;DP=103     GT:GQ:DP        1|0:66:24       1|1:8:15        1|1:100:63
+1      25605073        rs28638165      G       A       .       PASS    AA=g;DP=117     GT:GQ:DP        1|0:66:25       1|1:39:17       1|1:100:74
+4      34244104        rs1842534       G       A       .       PASS    AA=A;DP=108     GT:GQ:DP        1|0:66:27       0|0:39:20       1|0:100:61
+5      114418762       rs58535899      T       A       .       PASS    AA=T;DP=95      GT:GQ:DP        1|0:66:28       0|0:41:14       1|0:100:43
+6      30063925        .       A       G       .       PASS    AA=.;DP=150     GT:GQ:DP        1|0:66:39       0|0:39:28       1|0:100:83
+16     8285888 rs11864011      G       A       .       PASS    AA=G;DP=115     GT:GQ:DP        1|0:66:39       0|0:74:25       1|0:55:47
+6      155719660       rs450246        G       A       .       PASS    AA=G;DP=104     GT:GQ:DP        1|0:67:15       0|0:56:19       1|0:100:71
+4      143781536       rs7685002       A       G       .       PASS    AA=G;DP=80      GT:GQ:DP        1|0:67:15       1|1:54:18       1|1:100:45
+12     128804353       rs58749461      T       A       .       PASS    AA=T;DP=111     GT:GQ:DP        1|0:67:16       0|0:63:22       1|0:100:74
+19     49585417        rs8109490       C       T       .       PASS    AA=T;DP=60      GT:GQ:DP        1|0:67:16       1|1:33:13       1|1:84:29
+4      181533412       rs12646154      T       C       .       PASS    AA=T;DP=102     GT:GQ:DP        1|0:67:18       1|1:39:13       1|1:100:70
+15     84724347        rs16976562      A       G       .       PASS    AA=A;DP=103     GT:GQ:DP        1|0:67:19       1|1:48:16       1|1:100:68
+22     45367840        rs6008925       C       T       .       PASS    AA=C;DP=105     GT:GQ:DP        1|0:67:20       0|0:56:19       1|0:100:54
+10     49477552        rs11101399      C       T       .       PASS    AA=T;DP=129     GT:GQ:DP        1|0:67:20       1|0:10:22       1|1:100:89
+3      151384765       .       G       A       .       PASS    AA=G;DP=104     GT:GQ:DP        1|0:67:24       0|0:21:17       1|0:100:58
+7      3359052 rs6462030       G       A       .       PASS    AA=A;DP=107     GT:GQ:DP        1|0:67:25       1|0:100:18      1|1:100:64
+4      65617766        .       C       T       .       PASS    AA=c;DP=95      GT:GQ:DP        1|0:67:27       0|0:44:14       1|0:100:42
+1      14871777        rs4661295       C       T       .       PASS    AA=c;DP=126;HM2;HM3     GT:GQ:DP        1|0:67:27       0|0:53:19       1|0:100:80
+2      16384181        .       C       T       .       PASS    AA=C;DP=78      GT:GQ:DP        1|0:68:12       0|0:44:15       1|0:100:50
+7      32199032        rs2108858       C       A       .       PASS    AA=A;DP=90      GT:GQ:DP        1|0:68:15       1|1:48:16       1|1:100:57
+8      85394908        .       C       T       .       PASS    AA=C;DP=86      GT:GQ:DP        1|0:68:16       0|0:62:20       1|0:100:51
+7      9786394 .       C       T       .       PASS    AA=T;DP=104     GT:GQ:DP        1|0:68:16       0|0:74:25       1|0:100:63
+18     39499387        rs56109516      T       G       .       PASS    AA=.;DP=107     GT:GQ:DP        1|0:68:16       1|1:59:26       1|1:100:63
+1      14194846        rs12754217      G       A       .       PASS    AA=A;DP=108     GT:GQ:DP        1|0:68:17       0|0:48:25       1|0:100:61
+5      11862955        rs10058956      T       C       .       PASS    AA=C;DP=89      GT:GQ:DP        1|0:68:17       0|0:61:22       1|0:100:42
+9      110679051       rs7048388       C       T       .       PASS    AA=C;DP=101     GT:GQ:DP        1|0:68:17       1|0:100:22      1|1:70:56
+1      241002125       rs11587925      G       A       .       PASS    AA=G;DP=64      GT:GQ:DP        1|0:68:19       0|0:44:14       1|0:100:21
+4      971673  rs58037052      G       A       .       PASS    AA=G;DP=94      GT:GQ:DP        1|0:68:25       1|0:10:12       1|1:92:43
+16     59441999        rs12597239      C       T       .       PASS    AA=C;DP=112     GT:GQ:DP        1|0:68:27       0|0:62:21       1|0:100:62
+16     48097253        rs6500228       C       T       .       PASS    AA=T;DP=115     GT:GQ:DP        1|0:68:34       1|1:34:17       1|1:100:64
+11     100595575       .       T       C       .       PASS    AA=T;DP=132     GT:GQ:DP        1|0:68:40       0|0:27:28       1|0:100:66
+13     74325330        rs356761        A       C       .       PASS    AA=C;DP=101     GT:GQ:DP        1|0:68:9        0|0:58:19       1|0:100:74
+4      60919437        .       C       T       .       PASS    AA=C;DP=88      GT:GQ:DP        1|0:69:12       0|0:44:14       1|0:100:62
+12     116579247       rs28583752      G       A       .       PASS    AA=G;DP=94      GT:GQ:DP        1|0:69:14       0|0:53:18       1|0:100:62
+7      3165777 .       G       A       .       PASS    AA=G;DP=83      GT:GQ:DP        1|0:69:17       0|0:32:12       1|0:100:54
+12     20293734        rs676274        A       G       .       PASS    AA=G;DP=75      GT:GQ:DP        1|0:69:17       1|1:36:13       1|1:100:43
+9      23072499        .       T       G       .       PASS    AA=T;DP=79      GT:GQ:DP        1|0:69:18       0|0:47:16       1|0:100:45
+12     80029339        rs2400870       T       C       .       PASS    AA=T;DP=97      GT:GQ:DP        1|0:69:18       0|0:62:22       1|0:100:60
+9      83049462        rs7869507       T       G       .       PASS    AA=G;DP=82      GT:GQ:DP        1|0:69:18       1|0:100:21      1|1:92:43
+17     53388263        .       C       G       .       PASS    AA=G;DP=95      GT:GQ:DP        1|0:69:19       0|0:47:15       1|0:100:48
+4      142465880       rs1369970       A       G       .       PASS    AA=A;DP=111     GT:GQ:DP        1|0:69:19       0|0:68:22       1|0:100:66
+7      48143438        rs6972898       G       T       .       PASS    AA=G;DP=63      GT:GQ:DP        1|0:69:20       0|0:17:14       1|0:100:28
+1      105670071       rs2491612       C       T       .       PASS    AA=C;DP=115;HM2 GT:GQ:DP        1|0:69:21       1|1:57:19       1|1:100:74
+2      211160420       rs13385991      G       A       .       PASS    AA=G;DP=105     GT:GQ:DP        1|0:69:21       1|1:66:22       1|1:100:60
+19     57354462        rs17769264      G       A       .       PASS    AA=A;DP=98      GT:GQ:DP        1|0:69:22       0|0:62:20       1|0:100:56
+19     52973984        rs1862485       T       C       .       PASS    AA=C;DP=80      GT:GQ:DP        1|0:69:25       1|1:33:11       1|1:93:32
+11     2171043 rs7947138       T       C       .       PASS    AA=C;DP=100     GT:GQ:DP        1|0:69:31       1|0:54:13       1|1:100:43
+12     131809846       .       T       C       .       PASS    AA=T;DP=102     GT:GQ:DP        1|0:69:33       0|0:56:23       1|0:100:37
+13     95231557        rs12583795      A       G       .       PASS    AA=G;DP=115     GT:GQ:DP        1|0:69:33       0|0:67:23       1|0:100:59
+9      138966910       rs13283724      G       C       .       PASS    AA=C;DP=81      GT:GQ:DP        1|0:6:16        0|0:4:8 1|0:100:57
+6      134071822       rs62429310      T       A       .       PASS    AA=T;DP=87      GT:GQ:DP        1|0:6:20        0|0:52:17       1|0:100:39
+7      1807706 rs7783210       T       C       .       PASS    AA=C;DP=117     GT:GQ:DP        1|0:6:25        0|0:50:23       1|0:100:70
+6      160649695       rs436348        C       G       .       PASS    AA=G;DP=102     GT:GQ:DP        1|0:70:15       0|0:53:18       1|0:100:66
+8      106351924       .       T       C       .       PASS    AA=T;DP=99      GT:GQ:DP        1|0:70:15       1|0:100:18      1|1:100:66
+13     96469316        rs56658652      C       T       .       PASS    AA=T;DP=108     GT:GQ:DP        1|0:70:16       0|0:100:34      1|0:100:58
+13     94874887        rs7332286       T       A       .       PASS    AA=T;DP=94      GT:GQ:DP        1|0:70:16       0|0:50:25       1|0:100:49
+2      1758043 rs6737190       C       A       .       PASS    AA=C;DP=66      GT:GQ:DP        1|0:70:16       0|0:6:11        1|0:100:39
+3      163492615       rs12636302      G       A       .       PASS    AA=g;DP=80      GT:GQ:DP        1|0:70:16       1|1:45:17       1|1:88:46
+6      16616625        .       C       T       .       PASS    AA=C;DP=87      GT:GQ:DP        1|0:70:18       0|0:59:19       1|0:100:50
+13     62859233        rs60478024      A       G       .       PASS    AA=A;DP=98      GT:GQ:DP        1|0:70:19       0|0:71:26       1|0:100:55
+10     71796598        rs10999300      G       T       .       PASS    AA=G;DP=92      GT:GQ:DP        1|0:70:19       1|0:52:21       1|1:83:35
+3      71535550        rs9840310       A       G       .       PASS    AA=G;DP=94      GT:GQ:DP        1|0:70:19       1|1:32:15       1|1:52:64
+1      93466271        rs61335636      A       G       .       PASS    AA=A;DP=105     GT:GQ:DP        1|0:70:20       0|0:23:9        1|0:100:29
+7      136459114       rs1425071       C       T       .       PASS    AA=C;DP=72      GT:GQ:DP        1|0:70:21       1|0:100:16      1|1:66:23
+22     43326761        rs2349629       T       G       .       PASS    AA=G;DP=112     GT:GQ:DP        1|0:70:21       1|1:42:14       1|1:100:76
+5      27380952        .       T       G       .       PASS    AA=T;DP=100     GT:GQ:DP        1|0:70:22       0|0:24:18       1|0:100:58
+1      243660729       rs1756921       G       A       .       PASS    AA=G;DP=121;HM3 GT:GQ:DP        1|0:70:22       1|0:95:24       1|1:100:77
+1      193638255       rs6428284       G       A       .       PASS    AA=g;DP=91;HM2  GT:GQ:DP        1|0:70:23       1|0:100:20      1|1:76:44
+1      55457957        rs6686219       G       C       .       PASS    AA=C;DP=107     GT:GQ:DP        1|0:70:24       0|0:95:33       1|0:100:50
+5      8323426 .       G       A       .       PASS    AA=G;DP=120     GT:GQ:DP        1|0:70:25       0|0:50:22       1|0:100:73
+9      19757993        rs59290803      G       A       .       PASS    AA=G;DP=115     GT:GQ:DP        1|0:70:27       0|0:41:13       1|0:100:68
+13     46185943        rs9534474       C       T       .       PASS    AA=C;DP=111     GT:GQ:DP        1|0:70:27       1|1:60:21       1|1:100:60
+1      243386128       .       T       C       .       PASS    AA=T;DP=76      GT:GQ:DP        1|0:70:32       0|0:17:5        1|0:100:29
+10     58660169        .       C       T       .       PASS    AA=C;DP=93      GT:GQ:DP        1|0:71:11       0|0:44:15       1|0:100:69
+19     60427589        .       G       T       .       PASS    AA=G;DP=63      GT:GQ:DP        1|0:71:14       0|0:29:9        1|0:100:35
+5      40204209        rs350074        C       T       .       PASS    AA=T;DP=91      GT:GQ:DP        1|0:71:14       0|0:56:19       1|0:100:60
+2      52582221        .       A       G       .       PASS    AA=A;DP=83      GT:GQ:DP        1|0:71:14       0|0:71:24       1|0:100:37
+1      92859235        .       G       A       .       PASS    AA=G;DP=73      GT:GQ:DP        1|0:71:16       0|0:44:14       1|0:100:43
+11     86344554        rs3758658       T       C       .       PASS    AA=C;DP=110     GT:GQ:DP        1|0:71:17       0|0:14:12       1|0:100:37
+2      8264847 rs2213283       T       C       .       PASS    AA=T;DP=89      GT:GQ:DP        1|0:71:17       0|0:59:19       1|0:100:53
+20     29302397        rs6088591       C       A       .       PASS    AA=.;DP=98      GT:GQ:DP        1|0:71:18       1|1:30:25       1|1:80:60
+5      116737332       .       C       T       .       PASS    AA=c;DP=102     GT:GQ:DP        1|0:71:19       0|0:47:15       1|0:100:66
+8      85813944        rs1488706       G       A       .       PASS    AA=G;DP=81      GT:GQ:DP        1|0:71:20       0|0:53:17       1|0:100:43
+9      7375835 .       G       A       .       PASS    AA=A;DP=86      GT:GQ:DP        1|0:71:22       0|0:53:19       1|0:100:35
+2      222830571       rs45499591      C       G       .       PASS    AA=G;DP=102     GT:GQ:DP        1|0:71:22       0|0:56:18       1|0:100:62
+1      106135359       rs1657466       G       T       .       PASS    AA=G;DP=105     GT:GQ:DP        1|0:71:22       1|0:58:20       1|1:100:63
+3      104715039       rs4856072       T       C       .       PASS    AA=T;DP=77      GT:GQ:DP        1|0:71:23       0|0:18:13       1|0:100:32
+16     15452601        rs222132        G       A       .       PASS    AA=G;DP=102     GT:GQ:DP        1|0:71:23       1|0:74:16       1|1:72:62
+9      130364641       rs11789468      C       T       .       PASS    AA=c;DP=99      GT:GQ:DP        1|0:71:23       1|1:39:13       1|1:100:64
+9      27768851        rs12349288      T       G       .       PASS    AA=T;DP=109     GT:GQ:DP        1|0:71:25       0|0:71:23       1|0:100:62
+3      117908836       .       T       C       .       PASS    AA=T;DP=103     GT:GQ:DP        1|0:71:26       0|0:71:23       1|0:100:52
+1      99095026        rs11806466      A       C       .       PASS    AA=A;DP=108;HM2 GT:GQ:DP        1|0:71:27       1|1:51:17       1|1:100:66
+6      159657237       rs1504245       C       G       .       PASS    AA=G;DP=116     GT:GQ:DP        1|0:71:30       0|0:44:14       1|0:100:62
+15     98605593        rs61256032      G       A       .       PASS    AA=G;DP=120     GT:GQ:DP        1|0:71:37       0|0:44:15       1|0:100:69
+20     31874605        rs6087528       T       A       .       PASS    AA=N;DP=65      GT:GQ:DP        1|0:71:8        0|0:32:10       1|0:100:46
+12     73241185        rs12581896      T       C       .       PASS    AA=T;DP=70      GT:GQ:DP        1|0:72:13       0|0:56:18       1|0:100:28
+16     753651  rs3765319       G       A       .       PASS    AA=G;DP=54      GT:GQ:DP        1|0:72:18       0|0:26:8        1|0:69:24
+18     6267412 rs434453        G       A       .       PASS    AA=G;DP=101     GT:GQ:DP        1|0:72:19       1|0:76:20       1|1:100:62
+11     91079088        rs58940447      G       A       .       PASS    AA=G;DP=100     GT:GQ:DP        1|0:72:20       0|0:46:20       1|0:100:51
+10     55100952        rs60922377      T       A       .       PASS    AA=T;DP=96      GT:GQ:DP        1|0:72:21       0|0:18:16       1|0:100:61
+13     89475283        rs9583767       G       A       .       PASS    AA=G;DP=74      GT:GQ:DP        1|0:72:21       0|0:20:8        1|0:100:46
+12     98937318        rs12581251      T       G       .       PASS    AA=G;DP=109     GT:GQ:DP        1|0:72:21       1|0:100:20      1|1:100:64
+4      91661229        .       G       A       .       PASS    AA=G;DP=100     GT:GQ:DP        1|0:72:22       0|0:47:15       1|0:100:60
+4      69997820        rs12648462      T       C       .       PASS    AA=N;DP=100     GT:GQ:DP        1|0:72:22       1|1:69:23       1|1:100:55
+10     113486385       rs11195702      C       G       .       PASS    AA=C;DP=107     GT:GQ:DP        1|0:72:23       0|0:38:22       1|0:100:63
+1      202335219       .       C       G       .       PASS    AA=C;DP=98      GT:GQ:DP        1|0:72:23       0|0:65:22       1|0:100:53
+10     21100757        .       C       T       .       PASS    AA=C;DP=107     GT:GQ:DP        1|0:72:24       0|0:56:19       1|0:100:56
+1      156408102       .       G       A       .       PASS    AA=A;DP=121     GT:GQ:DP        1|0:72:26       0|0:100:35      1|0:100:61
+19     36437876        rs1013523       C       T       .       PASS    AA=C;DP=116     GT:GQ:DP        1|0:72:29       1|1:60:21       1|1:100:66
+9      9933289 rs6477426       A       G       .       PASS    AA=G;DP=100     GT:GQ:DP        1|0:72:30       1|1:16:12       1|1:100:61
+16     45019171        .       C       A       .       PASS    AA=.;DP=92      GT:GQ:DP        1|0:72:31       0|0:10:10       1|0:100:52
+13     59149621        .       T       C       .       PASS    AA=T;DP=65      GT:GQ:DP        1|0:72:9        0|0:62:21       1|0:100:23
+19     3255779 rs375599        G       C       .       PASS    AA=G;DP=90      GT:GQ:DP        1|0:73:15       0|0:44:16       1|0:100:56
+14     64236410        .       G       A       .       PASS    AA=A;DP=95      GT:GQ:DP        1|0:73:16       0|0:56:21       1|0:100:57
+12     23161973        rs11046804      C       T       .       PASS    AA=C;DP=79      GT:GQ:DP        1|0:73:17       0|0:27:18       1|0:100:30
+16     62250144        rs7188118       C       T       .       PASS    AA=c;DP=91      GT:GQ:DP        1|0:73:18       0|0:53:19       1|0:100:55
+12     57314074        rs34733812      C       T       .       PASS    AA=C;DP=91      GT:GQ:DP        1|0:73:18       0|0:74:25       1|0:100:45
+4      137695867       rs10009349      C       T       .       PASS    AA=c;DP=98      GT:GQ:DP        1|0:73:19       0|0:50:17       1|0:100:61
+10     55582109        .       T       G       .       PASS    AA=T;DP=85      GT:GQ:DP        1|0:73:20       0|0:33:23       1|0:100:42
+2      177465413       rs6709423       C       G       .       PASS    AA=G;DP=93      GT:GQ:DP        1|0:73:20       0|0:65:22       1|0:100:50
+17     75519455        rs920825        T       C       .       PASS    AA=C;DP=91      GT:GQ:DP        1|0:73:20       1|1:27:9        1|1:100:63
+19     9973432 rs8100235       T       G       .       PASS    AA=G;DP=108     GT:GQ:DP        1|0:73:21       0|0:55:21       1|0:100:68
+1      63135950        .       G       C       .       PASS    AA=G;DP=94      GT:GQ:DP        1|0:73:21       0|0:74:25       1|0:100:50
+2      138305558       rs4014143       A       G       .       PASS    AA=G;DP=72      GT:GQ:DP        1|0:73:21       1|0:24:12       1|1:100:35
+11     24567234        rs6484059       C       A       .       PASS    AA=A;DP=84      GT:GQ:DP        1|0:73:21       1|1:57:19       1|1:100:40
+2      57545914        .       C       T       .       PASS    AA=T;DP=111     GT:GQ:DP        1|0:73:22       1|0:100:23      1|1:100:68
+13     109992853       rs2479432       T       C       .       PASS    AA=C;DP=77      GT:GQ:DP        1|0:73:23       1|0:100:12      1|1:92:43
+14     19515398        rs7157946       C       T       .       PASS    AA=T;DP=83      GT:GQ:DP        1|0:73:24       1|0:83:12       1|1:74:26
+12     51496181        rs56272344      G       A       .       PASS    AA=g;DP=95      GT:GQ:DP        1|0:73:24       1|0:86:10       1|1:100:51
+12     109991167       .       C       A       .       PASS    AA=C;DP=102     GT:GQ:DP        1|0:73:25       0|0:44:15       1|0:100:62
+2      104018437       .       T       C       .       PASS    AA=T;DP=121     GT:GQ:DP        1|0:73:26       0|0:68:22       1|0:100:71
+2      201924906       rs1966423       G       C       .       PASS    AA=C;DP=107     GT:GQ:DP        1|0:73:26       1|0:100:24      1|1:100:58
+11     6837892 rs7947885       G       C       .       PASS    AA=G;DP=121     GT:GQ:DP        1|0:73:28       1|1:59:23       1|1:100:71
+10     38322849        rs7920489       C       T       .       PASS    AA=c;DP=133     GT:GQ:DP        1|0:73:29       0|0:86:28       1|0:100:77
+1      240891643       rs59012988      C       T       .       PASS    AA=C;DP=117     GT:GQ:DP        1|0:73:30       0|0:80:27       1|0:100:60
+3      184544457       rs7640709       G       A       .       PASS    AA=A;DP=91      GT:GQ:DP        1|0:73:30       1|1:48:17       1|1:60:33
+16     49086959        rs11863643      C       G       .       PASS    AA=G;DP=114     GT:GQ:DP        1|0:73:32       0|0:43:20       1|0:100:62
+14     104505824       rs28583515      C       T       .       PASS    AA=C;DP=74      GT:GQ:DP        1|0:74:14       1|0:53:13       1|1:89:47
+14     79420773        rs5007588       C       T       .       PASS    AA=c;DP=90      GT:GQ:DP        1|0:74:14       1|1:60:20       1|1:100:55
+1      75848978        rs6703265       G       A       .       PASS    AA=A;DP=81;HM2;HM3      GT:GQ:DP        1|0:74:15       0|0:59:19       1|0:100:34
+14     83919454        .       T       G       .       PASS    AA=T;DP=78      GT:GQ:DP        1|0:74:16       0|0:50:18       1|0:100:43
+19     12328889        .       G       A       .       PASS    AA=A;DP=123     GT:GQ:DP        1|0:74:16       0|0:65:21       1|0:100:43
+2      138723760       rs9808430       G       A       .       PASS    AA=-;DP=92      GT:GQ:DP        1|0:74:16       0|0:92:31       1|0:100:45
+11     64360913        .       C       T       .       PASS    AA=C;DP=79      GT:GQ:DP        1|0:74:17       0|0:23:7        1|0:100:56
+4      189694133       .       G       A       .       PASS    AA=G;DP=59      GT:GQ:DP        1|0:74:17       0|0:49:20       1|0:100:18
+12     68703241        rs789326        C       T       .       PASS    AA=C;DP=97      GT:GQ:DP        1|0:74:18       1|1:16:16       1|1:100:66
+17     72085838        rs4258648       C       T       .       PASS    AA=T;DP=123     GT:GQ:DP        1|0:74:20       0|0:53:17       1|0:100:87
+4      143729444       rs2874870       C       T       .       PASS    AA=C;DP=73      GT:GQ:DP        1|0:74:20       1|0:60:16       1|1:72:25
+3      37074570        rs3774326       G       A       .       PASS    AA=G;DP=102     GT:GQ:DP        1|0:74:21       1|0:49:18       1|1:100:65
+19     60691357        rs55799523      C       A       .       PASS    AA=c;DP=55      GT:GQ:DP        1|0:74:22       0|0:29:9        1|0:49:22
+14     102299354       rs10133269      C       A       .       PASS    AA=A;DP=86      GT:GQ:DP        1|0:74:22       1|0:68:12       1|1:100:39
+11     18146317        .       C       T       .       PASS    AA=.;DP=106     GT:GQ:DP        1|0:74:25       0|0:44:14       1|0:100:69
+3      49820010        rs58339610      T       A       .       PASS    AA=T;DP=96      GT:GQ:DP        1|0:74:27       1|0:52:15       1|1:100:53
+4      7487378 rs58482081      C       T       .       PASS    AA=C;DP=125     GT:GQ:DP        1|0:74:28       0|0:53:17       1|0:100:80
+7      81895594        .       A       G       .       PASS    AA=A;DP=73      GT:GQ:DP        1|0:75:10       0|0:53:17       1|0:100:47
+3      120878489       rs2280578       A       C       .       PASS    AA=A;DP=78      GT:GQ:DP        1|0:75:13       0|0:47:15       1|0:100:53
+18     30266585        .       A       C       .       PASS    AA=A;DP=76      GT:GQ:DP        1|0:75:15       0|0:41:13       1|0:100:47
+18     10647080        rs552050        T       G       .       PASS    AA=T;DP=91      GT:GQ:DP        1|0:75:15       1|1:33:11       1|1:100:67
+17     26359548        rs28481570      G       C       .       PASS    AA=.;DP=71      GT:GQ:DP        1|0:75:16       1|1:42:14       1|1:79:39
+14     96833929        rs61179984      A       G       .       PASS    AA=A;DP=82      GT:GQ:DP        1|0:75:17       0|0:31:20       1|0:100:47
+2      214419433       rs13023752      C       T       .       PASS    AA=c;DP=89      GT:GQ:DP        1|0:75:19       0|0:35:11       1|0:100:59
+7      19419572        rs17353320      A       G       .       PASS    AA=A;DP=90      GT:GQ:DP        1|0:75:19       0|0:47:15       1|0:100:55
+7      29819609        rs62459989      C       T       .       PASS    AA=C;DP=87      GT:GQ:DP        1|0:75:19       1|0:100:11      1|1:100:54
+2      17902429        .       T       C       .       PASS    AA=T;DP=85      GT:GQ:DP        1|0:75:19       1|0:87:23       1|1:69:44
+5      2536940 rs10063860      T       G       .       PASS    AA=T;DP=92      GT:GQ:DP        1|0:75:19       1|1:39:13       1|1:39:44
+19     2678064 .       G       T       .       PASS    AA=G;DP=88      GT:GQ:DP        1|0:75:20       0|0:10:9        1|0:97:48
+15     25448894        .       G       A       .       PASS    AA=G;DP=85      GT:GQ:DP        1|0:75:20       0|0:38:12       1|0:100:53
+5      116633988       rs28636868      A       G       .       PASS    AA=A;DP=101     GT:GQ:DP        1|0:75:20       1|1:49:26       1|1:100:53
+19     60505226        .       A       G       .       PASS    AA=A;DP=86      GT:GQ:DP        1|0:75:21       0|0:44:14       1|0:100:51
+4      97660428        rs10012487      C       A       .       PASS    AA=C;DP=101     GT:GQ:DP        1|0:75:21       1|1:13:15       1|1:100:65
+15     25555336        .       C       G       .       PASS    AA=C;DP=79      GT:GQ:DP        1|0:75:22       0|0:26:9        1|0:100:41
+4      101191474       .       G       A       .       PASS    AA=g;DP=103     GT:GQ:DP        1|0:75:22       0|0:56:19       1|0:100:61
+11     26960185        rs12282716      C       T       .       PASS    AA=C;DP=111     GT:GQ:DP        1|0:75:23       0|0:86:28       1|0:100:61
+2      116881254       rs13422291      A       T       .       PASS    AA=A;DP=131     GT:GQ:DP        1|0:75:24       0|0:74:25       1|0:100:82
+1      76799498        rs7547383       G       A       .       PASS    AA=G;DP=125;HM2 GT:GQ:DP        1|0:75:26       0|0:38:23       1|0:100:80
+1      34233761        rs16836161      G       C       .       PASS    AA=G;DP=139;HM2 GT:GQ:DP        1|0:75:28       0|0:72:29       1|0:100:79
+4      6468463 rs62284476      G       A       .       PASS    AA=G;DP=134     GT:GQ:DP        1|0:75:29       0|0:47:15       1|0:100:42
+7      156581617       rs2366002       G       A       .       PASS    AA=G;DP=112     GT:GQ:DP        1|0:75:30       1|1:60:20       1|1:100:62
+12     24726681        rs11614944      C       T       .       PASS    AA=C;DP=82      GT:GQ:DP        1|0:76:11       0|0:47:15       1|0:100:54
+18     36741018        .       A       G       .       PASS    AA=A;DP=77      GT:GQ:DP        1|0:76:14       0|0:83:28       1|0:100:35
+22     36094840        .       C       T       .       PASS    AA=c;DP=76      GT:GQ:DP        1|0:76:16       0|0:35:12       1|0:100:49
+11     23879238        rs12278722      C       A       .       PASS    AA=.;DP=74      GT:GQ:DP        1|0:76:17       0|0:23:8        1|0:100:49
+12     21124397        rs11045727      G       A       .       PASS    AA=A;DP=81      GT:GQ:DP        1|0:76:17       0|0:44:14       1|0:100:40
+4      111671722       .       A       G       .       PASS    AA=A;DP=62      GT:GQ:DP        1|0:76:18       0|0:35:11       1|0:100:23
+4      174041225       rs7676418       G       A       .       PASS    AA=g;DP=110     GT:GQ:DP        1|0:76:18       0|0:53:18       1|0:100:74
+21     41152137        .       T       C       .       PASS    AA=T;DP=101     GT:GQ:DP        1|0:76:18       1|1:69:25       1|1:100:59
+4      28133420        rs7666682       C       T       .       PASS    AA=C;DP=86      GT:GQ:DP        1|0:76:19       1|0:100:14      1|1:85:51
+22     43554745        rs56295989      A       G       .       PASS    AA=N;DP=83      GT:GQ:DP        1|0:76:19       1|0:61:11       1|1:100:46
+15     84313429        rs4887453       C       T       .       PASS    AA=C;DP=94      GT:GQ:DP        1|0:76:19       1|0:77:15       1|1:100:61
+12     19949818        rs1492124       T       C       .       PASS    AA=t;DP=105     GT:GQ:DP        1|0:76:20       0|0:57:24       1|0:100:56
+3      166793985       rs11920215      G       A       .       PASS    AA=G;DP=69      GT:GQ:DP        1|0:76:20       1|1:39:13       1|1:75:25
+10     57298557        rs10825648      G       C       .       PASS    AA=C;DP=110     GT:GQ:DP        1|0:76:20       1|1:57:19       1|1:100:72
+6      32713417        rs9272448       A       T       .       PASS    AA=a;DP=96      GT:GQ:DP        1|0:76:21       0|0:76:30       1|0:100:34
+5      94755525        rs33893 G       A       .       PASS    AA=A;DP=85      GT:GQ:DP        1|0:76:21       1|0:100:22      1|1:90:31
+18     75627595        .       G       C       .       PASS    AA=G;DP=85      GT:GQ:DP        1|0:76:21       1|0:62:14       1|1:100:37
+4      135734128       .       A       T       .       PASS    AA=N;DP=91      GT:GQ:DP        1|0:76:23       0|0:65:21       1|0:100:32
+18     59524575        rs9973096       T       C       .       PASS    AA=N;DP=120     GT:GQ:DP        1|0:76:23       1|1:63:22       1|1:100:75
+5      146059405       .       C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        1|0:76:24       0|0:80:33       1|0:100:59
+7      79071248        rs2961530       G       A       .       PASS    AA=A;DP=102     GT:GQ:DP        1|0:76:24       1|1:45:15       1|1:100:65
+16     26453470        rs1895383       T       C       .       PASS    AA=C;DP=105     GT:GQ:DP        1|0:76:25       1|0:100:18      1|1:100:62
+8      13260179        .       A       G       .       PASS    AA=A;DP=124     GT:GQ:DP        1|0:76:28       0|0:92:30       1|0:100:63
+2      51729610        .       T       G       .       PASS    AA=T;DP=74      GT:GQ:DP        1|0:77:14       0|0:53:18       1|0:100:31
+X      61920294        .       G       T       .       PASS    AA=.;DP=105     GT:GQ:DP        1|0:77:16       0|0:29:27       1|0:74:39
+8      82972662        .       C       A       .       PASS    AA=C;DP=94      GT:GQ:DP        1|0:77:16       0|0:38:24       1|0:100:53
+14     32460780        rs35985675      T       A       .       PASS    AA=T;DP=87      GT:GQ:DP        1|0:77:17       0|0:32:10       1|0:100:62
+11     10936018        rs7101563       A       C       .       PASS    AA=A;DP=88      GT:GQ:DP        1|0:77:17       1|1:39:14       1|1:100:57
+5      164680701       rs1347151       A       C       .       PASS    AA=A;DP=88      GT:GQ:DP        1|0:77:19       0|0:56:18       1|0:100:49
+2      59564079        rs61037768      G       T       .       PASS    AA=T;DP=88      GT:GQ:DP        1|0:77:19       1|0:100:16      1|1:100:41
+16     81426449        rs2549137       C       T       .       PASS    AA=T;DP=118     GT:GQ:DP        1|0:77:21       1|1:78:26       1|1:100:67
+7      81945015        rs6951744       T       C       .       PASS    AA=T;DP=93      GT:GQ:DP        1|0:77:22       0|0:35:22       1|0:100:50
+3      110042096       rs62266464      A       C       .       PASS    AA=A;DP=85      GT:GQ:DP        1|0:77:22       0|0:40:24       1|0:100:29
+4      130369631       .       G       A       .       PASS    AA=G;DP=93      GT:GQ:DP        1|0:77:22       0|0:62:21       1|0:100:49
+5      167250990       rs58786367      A       G       .       PASS    AA=A;DP=133     GT:GQ:DP        1|0:77:22       0|0:95:36       1|0:100:75
+4      28013611        rs1510701       A       C       .       PASS    AA=C;DP=95      GT:GQ:DP        1|0:77:22       1|0:100:15      1|1:100:58
+2      7558513 rs11896809      A       G       .       PASS    AA=A;DP=94      GT:GQ:DP        1|0:77:24       0|0:44:16       1|0:100:54
+8      123862005       .       G       A       .       PASS    AA=G;DP=78      GT:GQ:DP        1|0:77:25       0|0:38:12       1|0:100:34
+4      74743927        rs6832422       G       T       .       PASS    AA=G;DP=112     GT:GQ:DP        1|0:77:26       1|1:43:24       1|1:100:62
+11     69364213        rs10752573      A       C       .       PASS    AA=C;DP=104     GT:GQ:DP        1|0:77:27       1|1:24:8        1|1:100:68
+6      156951376       rs2817462       G       A       .       PASS    AA=g;DP=140     GT:GQ:DP        1|0:77:29       0|0:80:26       1|0:100:44
+14     29540716        rs61980038      G       T       .       PASS    AA=G;DP=112     GT:GQ:DP        1|0:77:30       0|0:10:12       1|0:100:39
+18     7394341 rs12607115      G       C       .       PASS    AA=g;DP=100     GT:GQ:DP        1|0:77:30       1|1:60:20       1|1:100:51
+10     127665503       .       T       C       .       PASS    AA=C;DP=126     GT:GQ:DP        1|0:77:32       0|0:62:21       1|0:100:73
+21     20743253        rs1786360       A       G       .       PASS    AA=A;DP=70      GT:GQ:DP        1|0:77:9        1|0:100:17      1|1:99:34
+15     37326918        rs59681045      A       G       .       PASS    AA=A;DP=73      GT:GQ:DP        1|0:78:12       0|0:50:16       1|0:100:45
+13     70646221        .       G       A       .       PASS    AA=g;DP=79      GT:GQ:DP        1|0:78:13       0|0:38:12       1|0:100:54
+14     79153849        rs221508        C       T       .       PASS    AA=C;DP=96      GT:GQ:DP        1|0:78:14       1|1:90:30       1|1:100:55
+10     121048849       .       C       T       .       PASS    AA=C;DP=92      GT:GQ:DP        1|0:78:16       0|0:22:21       1|0:100:53
+3      105853893       rs2685030       T       C       .       PASS    AA=T;DP=88      GT:GQ:DP        1|0:78:16       0|0:53:17       1|0:100:53
+2      228616702       rs2396522       G       A       .       PASS    AA=A;DP=79      GT:GQ:DP        1|0:78:17       1|1:54:18       1|1:100:45
+3      96444124        .       C       A       .       PASS    AA=C;DP=78      GT:GQ:DP        1|0:78:18       0|0:46:22       1|0:100:38
+2      51040091        rs35903458      A       T       .       PASS    AA=A;DP=82      GT:GQ:DP        1|0:78:19       0|0:59:19       1|0:100:34
+2      1225189 rs35753562      C       T       .       PASS    AA=C;DP=87      GT:GQ:DP        1|0:78:19       1|0:100:16      1|1:100:47
+8      144367855       rs58301047      G       C       .       PASS    AA=N;DP=73      GT:GQ:DP        1|0:78:19       1|0:46:15       1|1:73:37
+8      65209907        rs2629637       A       G       .       PASS    AA=G;DP=94      GT:GQ:DP        1|0:78:19       1|1:79:34       1|1:100:41
+4      3605026 rs61153674      A       G       .       PASS    AA=G;DP=117     GT:GQ:DP        1|0:78:20       0|0:17:6        1|0:71:87
+3      89716776        rs11915308      G       A       .       PASS    AA=G;DP=99      GT:GQ:DP        1|0:78:20       0|0:38:13       1|0:100:66
+5      34484616        rs12659880      A       G       .       PASS    AA=a;DP=107     GT:GQ:DP        1|0:78:20       1|0:69:19       1|1:100:67
+4      124492951       .       A       G       .       PASS    AA=A;DP=111     GT:GQ:DP        1|0:78:21       0|0:56:20       1|0:100:74
+20     41065240        rs6030601       A       T       .       PASS    AA=T;DP=93      GT:GQ:DP        1|0:78:21       0|0:66:30       1|0:100:43
+2      32957797        .       A       G       .       PASS    AA=A;DP=115     GT:GQ:DP        1|0:78:21       0|0:80:26       1|0:100:64
+3      133438698       rs11707639      A       G       .       PASS    AA=G;DP=103     GT:GQ:DP        1|0:78:21       1|1:72:27       1|1:100:55
+12     45716606        .       G       A       .       PASS    AA=G;DP=110     GT:GQ:DP        1|0:78:23       0|0:29:20       1|0:100:68
+10     126577132       rs7085829       A       G       .       PASS    AA=A;DP=102     GT:GQ:DP        1|0:78:23       0|0:50:18       1|0:76:62
+8      94662457        .       G       A       .       PASS    AA=G;DP=96      GT:GQ:DP        1|0:78:25       0|0:44:15       1|0:100:56
+17     13308165        rs58861978      G       A       .       PASS    AA=G;DP=103     GT:GQ:DP        1|0:78:25       1|0:100:17      1|1:75:62
+3      136751298       rs9826153       A       G       .       PASS    AA=A;DP=113     GT:GQ:DP        1|0:78:28       0|0:35:13       1|0:100:73
+21     26617922        rs59651146      A       G       .       PASS    AA=A;DP=114     GT:GQ:DP        1|0:78:28       0|0:45:24       1|0:100:62
+9      24917401        rs16908972      C       T       .       PASS    AA=-;DP=107     GT:GQ:DP        1|0:78:28       0|0:47:16       1|0:100:69
+8      82770307        rs2955004       G       C       .       PASS    AA=G;DP=106     GT:GQ:DP        1|0:78:32       1|1:54:18       1|1:100:57
+14     103423539       .       C       T       .       PASS    AA=c;DP=151     GT:GQ:DP        1|0:78:45       0|0:41:14       1|0:100:86
+X      43218144        .       A       C       .       PASS    AA=A;DP=60      GT:GQ:DP        1|0:79:10       0|0:38:12       1|0:29:20
+4      61808591        rs1505674       A       C       .       PASS    AA=A;DP=81      GT:GQ:DP        1|0:79:10       0|0:47:16       1|0:100:55
+2      60535951        rs12621957      A       G       .       PASS    AA=A;DP=80      GT:GQ:DP        1|0:79:12       1|0:99:19       1|1:97:45
+12     67714795        rs1908658       A       G       .       PASS    AA=a;DP=58      GT:GQ:DP        1|0:79:14       1|0:100:18      1|1:54:19
+20     19466684        .       T       A       .       PASS    AA=T;DP=75      GT:GQ:DP        1|0:79:15       0|0:38:13       1|0:100:46
+2      14388212        rs56081879      A       G       .       PASS    AA=G;DP=76      GT:GQ:DP        1|0:79:15       0|0:56:18       1|0:100:44
+2      214024890       .       G       C       .       PASS    AA=G;DP=65      GT:GQ:DP        1|0:79:15       0|0:5:5 1|0:100:36
+6      120812949       .       C       A       .       PASS    AA=c;DP=74      GT:GQ:DP        1|0:79:16       0|0:12:14       1|0:100:44
+7      24231186        rs16212 C       G       .       PASS    AA=C;DP=97      GT:GQ:DP        1|0:79:16       0|0:50:16       1|0:100:64
+10     57098519        rs59661579      C       G       .       PASS    AA=C;DP=86      GT:GQ:DP        1|0:79:17       0|0:77:27       1|0:100:32
+5      136339669       rs6596361       T       C       .       PASS    AA=T;DP=97      GT:GQ:DP        1|0:79:17       1|1:63:21       1|1:100:48
+13     113268778       rs9324248       C       T       .       PASS    AA=T;DP=73      GT:GQ:DP        1|0:79:19       1|1:42:17       1|1:81:28
+7      73110733        rs56162607      G       C       .       PASS    AA=G;DP=73      GT:GQ:DP        1|0:79:20       0|0:23:7        1|0:100:44
+10     29571939        rs56013530      T       C       .       PASS    AA=C;DP=81      GT:GQ:DP        1|0:79:20       0|0:41:14       1|0:100:38
+7      20618080        .       A       G       .       PASS    AA=A;DP=90      GT:GQ:DP        1|0:79:20       0|0:50:16       1|0:100:50
+2      188125163       rs10197436      T       C       .       PASS    AA=t;DP=73      GT:GQ:DP        1|0:79:20       0|0:56:18       1|0:100:36
+6      32774699        rs2856726       A       T       .       PASS    AA=N;DP=98      GT:GQ:DP        1|0:79:20       0|0:65:21       1|0:100:57
+6      80705249        rs239524        A       G       .       PASS    AA=a;DP=108     GT:GQ:DP        1|0:79:20       1|0:100:21      1|1:57:50
+7      70215692        rs847725        C       A       .       PASS    AA=A;DP=114     GT:GQ:DP        1|0:79:20       1|1:47:27       1|1:100:69
+14     46047261        rs2899989       C       T       .       PASS    AA=T;DP=81      GT:GQ:DP        1|0:79:21       1|1:57:19       1|1:87:29
+2      170421608       rs10190519      G       A       .       PASS    AA=a;DP=99      GT:GQ:DP        1|0:79:22       0|0:56:18       1|0:100:61
+13     70490641        .       C       A       .       PASS    AA=C;DP=79      GT:GQ:DP        1|0:79:23       0|0:50:18       1|0:100:39
+2      130760871       .       C       T       .       PASS    AA=C;DP=97      GT:GQ:DP        1|0:79:24       0|0:35:12       1|0:100:61
+22     45947549        rs59972012      C       G       .       PASS    AA=C;DP=66      GT:GQ:DP        1|0:79:24       0|0:38:12       1|0:87:24
+16     17383249        rs7189031       G       A       .       PASS    AA=A;DP=94      GT:GQ:DP        1|0:79:24       1|1:54:18       1|1:100:51
+11     6237976 rs11040819      T       C       .       PASS    AA=N;DP=103     GT:GQ:DP        1|0:79:24       1|1:54:18       1|1:100:63
+4      169644522       rs2029386       A       G       .       PASS    AA=A;DP=128     GT:GQ:DP        1|0:79:25       1|1:45:16       1|1:100:84
+19     994260  rs58262414      T       G       .       PASS    AA=T;DP=109     GT:GQ:DP        1|0:79:26       0|0:35:11       1|0:100:70
+8      17698078        rs13269912      T       C       .       PASS    AA=t;DP=141     GT:GQ:DP        1|0:79:27       0|0:11:35       1|0:100:80
+1      163659438       rs157874        T       G       .       PASS    AA=T;DP=120     GT:GQ:DP        1|0:79:33       1|0:100:21      1|1:100:67
+6      152039481       rs9689018       C       T       .       PASS    AA=C;DP=121     GT:GQ:DP        1|0:79:35       1|0:100:24      1|1:100:61
+1      95120968        .       G       A       .       PASS    AA=g;DP=149     GT:GQ:DP        1|0:79:36       0|0:86:29       1|0:100:87
+19     1446277 rs12459408      C       T       .       PASS    AA=c;DP=83      GT:GQ:DP        1|0:80:11       0|0:20:6        1|0:100:66
+2      73537453        .       A       G       .       PASS    AA=A;DP=95      GT:GQ:DP        1|0:80:12       0|0:56:18       1|0:100:55
+19     37365519        rs7259538       A       G       .       PASS    AA=a;DP=67      GT:GQ:DP        1|0:80:16       0|0:23:8        1|0:75:32
+15     27051416        rs58972186      G       A       .       PASS    AA=A;DP=105     GT:GQ:DP        1|0:80:16       0|0:35:19       1|0:100:69
+16     63462091        rs13333394      C       T       .       PASS    AA=C;DP=91      GT:GQ:DP        1|0:80:17       0|0:40:19       1|0:100:53
+12     42584817        rs4609659       C       T       .       PASS    AA=C;DP=106     GT:GQ:DP        1|0:80:17       1|0:100:26      1|1:100:63
+1      80985936        rs7541278       T       C       .       PASS    AA=T;DP=88;HM2;HM3      GT:GQ:DP        1|0:80:20       0|0:53:18       1|0:100:50
+9      25407791        rs1590677       C       T       .       PASS    AA=T;DP=70      GT:GQ:DP        1|0:80:20       1|1:36:12       1|1:100:39
+5      18868437        rs9292381       A       G       .       PASS    AA=G;DP=62      GT:GQ:DP        1|0:80:21       0|0:38:12       1|0:100:29
+18     39712942        rs7232199       G       T       .       PASS    AA=g;DP=84      GT:GQ:DP        1|0:80:21       0|0:44:14       1|0:100:48
+7      92508375        rs10282483      T       C       .       PASS    AA=t;DP=60      GT:GQ:DP        1|0:80:22       0|0:35:11       1|0:100:21
+11     61858609        rs12420825      G       A       .       PASS    AA=G;DP=110     GT:GQ:DP        1|0:80:22       0|0:57:21       1|0:100:66
+4      58591166        .       C       G       .       PASS    AA=C;DP=94      GT:GQ:DP        1|0:80:22       0|0:59:20       1|0:100:51
+8      139746224       .       C       T       .       PASS    AA=C;DP=134     GT:GQ:DP        1|0:80:24       0|0:100:34      1|0:100:80
+9      110552955       rs7036502       C       T       .       PASS    AA=T;DP=117     GT:GQ:DP        1|0:80:24       1|0:100:32      1|1:100:61
+5      167125077       rs6873862       G       A       .       PASS    AA=A;DP=137     GT:GQ:DP        1|0:80:24       1|1:49:23       1|1:100:87
+2      108014167       rs12467395      G       A       .       PASS    AA=g;DP=121     GT:GQ:DP        1|0:80:25       0|0:44:25       1|0:100:73
+5      71340035        .       T       C       .       PASS    AA=T;DP=112     GT:GQ:DP        1|0:80:26       0|0:50:16       1|0:100:66
+1      95597096        rs10783008      G       A       .       PASS    AA=G;DP=72      GT:GQ:DP        1|0:80:26       0|0:53:17       1|0:100:20
+2      59910206        rs11902557      G       C       .       PASS    AA=C;DP=143     GT:GQ:DP        1|0:80:26       0|0:56:28       1|0:100:88
+7      81594249        rs929381        C       A       .       PASS    AA=A;DP=121     GT:GQ:DP        1|0:80:29       1|1:75:25       1|1:100:52
+22     47862045        .       C       T       .       PASS    AA=C;DP=103     GT:GQ:DP        1|0:80:30       0|0:23:7        1|0:100:66
+14     69620854        rs12147431      G       A       .       PASS    AA=A;DP=140     GT:GQ:DP        1|0:80:32       0|0:68:24       1|0:100:84
+7      61459065        .       A       G       .       PASS    AA=.;DP=98      GT:GQ:DP        1|0:80:33       0|0:11:9        1|0:100:55
+1      230241561       rs9661837       A       G       .       PASS    AA=A;DP=129;HM2;HM3     GT:GQ:DP        1|0:80:33       1|1:55:24       1|1:100:70
+8      23660376        rs568890        C       G       .       PASS    AA=C;DP=94      GT:GQ:DP        1|0:81:13       0|0:59:19       1|0:100:64
+10     37473717        .       G       T       .       PASS    AA=g;DP=62      GT:GQ:DP        1|0:81:14       0|0:18:16       1|0:100:22
+18     50781159        .       G       A       .       PASS    AA=G;DP=106     GT:GQ:DP        1|0:81:16       0|0:71:23       1|0:100:69
+3      25099103        .       G       T       .       PASS    AA=G;DP=86      GT:GQ:DP        1|0:81:18       0|0:14:13       1|0:100:53
+13     62932134        rs9570896       G       A       .       PASS    AA=g;DP=88      GT:GQ:DP        1|0:81:18       0|0:29:20       1|0:100:39
+4      190355505       .       G       A       .       PASS    AA=G;DP=75      GT:GQ:DP        1|0:81:18       0|0:34:21       1|0:100:27
+4      116939560       rs12711035      A       G       .       PASS    AA=A;DP=72      GT:GQ:DP        1|0:81:18       0|0:41:13       1|0:100:40
+4      69929761        .       T       A       .       PASS    AA=-;DP=77      GT:GQ:DP        1|0:81:20       1|0:100:23      1|1:36:28
+4      184508621       rs13122009      T       C       .       PASS    AA=T;DP=109     GT:GQ:DP        1|0:81:21       0|0:57:24       1|0:100:64
+10     9557305 rs4749871       G       A       .       PASS    AA=g;DP=88      GT:GQ:DP        1|0:81:21       1|0:100:13      1|1:99:54
+5      31405960        .       C       T       .       PASS    AA=C;DP=97      GT:GQ:DP        1|0:81:21       1|0:72:19       1|1:100:57
+9      7343069 rs7851475       C       T       .       PASS    AA=C;DP=102     GT:GQ:DP        1|0:81:21       1|1:57:19       1|1:100:59
+9      119699846       rs12380502      G       C       .       PASS    AA=C;DP=125     GT:GQ:DP        1|0:81:23       0|0:89:29       1|0:100:73
+22     37853216        .       G       A       .       PASS    AA=G;DP=97      GT:GQ:DP        1|0:81:26       0|0:28:14       1|0:100:57
+5      56058848        .       T       C       .       PASS    AA=T;DP=107     GT:GQ:DP        1|0:81:26       0|0:41:22       1|0:100:56
+13     102700009       rs16961786      C       A       .       PASS    AA=A;DP=144     GT:GQ:DP        1|0:81:27       0|0:49:27       1|0:100:41
+7      15942429        rs7794657       G       C       .       PASS    AA=C;DP=127     GT:GQ:DP        1|0:81:27       1|1:99:34       1|1:100:57
+6      13282698        rs7771293       G       A       .       PASS    AA=g;DP=122     GT:GQ:DP        1|0:81:29       1|0:100:43      1|1:100:40
+10     5690238 rs58786423      A       G       .       PASS    AA=A;DP=177     GT:GQ:DP        1|0:81:31       0|0:86:29       1|0:100:67
+12     34227545        .       G       C       .       PASS    AA=g;DP=97      GT:GQ:DP        1|0:81:31       1|0:100:25      1|1:69:30
+11     44903410        rs7129095       G       A       .       PASS    AA=G;DP=101     GT:GQ:DP        1|0:81:31       1|0:32:13       1|1:100:53
+7      105328156       rs4727634       G       C       .       PASS    AA=G;DP=135     GT:GQ:DP        1|0:81:34       0|0:74:25       1|0:100:73
+1      55028300        .       C       T       .       PASS    AA=C;DP=127     GT:GQ:DP        1|0:81:37       0|0:86:29       1|0:100:61
+6      150914264       .       A       T       .       PASS    AA=A;DP=50      GT:GQ:DP        1|0:82:10       0|0:53:17       1|0:81:21
+13     87545112        rs9519424       G       T       .       PASS    AA=G;DP=82      GT:GQ:DP        1|0:82:13       0|0:29:18       1|0:100:52
+5      87435259        rs1346443       T       C       .       PASS    AA=t;DP=79      GT:GQ:DP        1|0:82:13       1|0:100:15      1|1:100:52
+4      37588307        rs2925953       G       A       .       PASS    AA=G;DP=74      GT:GQ:DP        1|0:82:14       0|0:50:17       1|0:100:42
+1      102083294       rs4908195       A       C       .       PASS    AA=a;DP=60      GT:GQ:DP        1|0:82:15       1|1:12:16       1|1:40:19
+16     52873996        rs59794690      A       G       .       PASS    AA=A;DP=68      GT:GQ:DP        1|0:82:16       0|0:50:16       1|0:100:27
+4      93376839        rs58420122      T       A       .       PASS    AA=T;DP=91      GT:GQ:DP        1|0:82:17       0|0:24:14       1|0:100:60
+13     109970624       .       G       A       .       PASS    AA=G;DP=95      GT:GQ:DP        1|0:82:17       0|0:29:9        1|0:100:69
+11     71561969        .       C       T       .       PASS    AA=.;DP=92      GT:GQ:DP        1|0:82:17       0|0:47:18       1|0:100:47
+4      60376883        .       G       A       .       PASS    AA=G;DP=92      GT:GQ:DP        1|0:82:17       0|0:50:16       1|0:100:52
+7      113462502       .       G       A       .       PASS    AA=G;DP=103     GT:GQ:DP        1|0:82:18       0|0:65:22       1|0:100:64
+2      168262905       rs16854068      G       A       .       PASS    AA=G;DP=120     GT:GQ:DP        1|0:82:18       0|0:83:28       1|0:100:75
+6      95375185        .       T       C       .       PASS    AA=T;DP=107     GT:GQ:DP        1|0:82:19       0|0:77:25       1|0:100:62
+13     87352952        .       C       T       .       PASS    AA=C;DP=73      GT:GQ:DP        1|0:82:20       1|0:92:18       1|1:75:27
+6      25722574        rs1569483       C       G       .       PASS    AA=C;DP=100     GT:GQ:DP        1|0:82:23       0|0:44:14       1|0:100:62
+2      205133429       rs58974771      A       G       .       PASS    AA=a;DP=121     GT:GQ:DP        1|0:82:25       0|0:68:23       1|0:100:75
+11     107167851       rs4754258       T       C       .       PASS    AA=t;DP=109     GT:GQ:DP        1|0:82:25       1|0:100:15      1|1:100:69
+6      37877589        .       G       A       .       PASS    AA=g;DP=126     GT:GQ:DP        1|0:82:26       0|0:41:13       1|0:100:90
+17     60983213        .       G       A       .       PASS    AA=G;DP=87      GT:GQ:DP        1|0:82:26       0|0:41:14       1|0:100:38
+5      99538265        .       G       C       .       PASS    AA=G;DP=95      GT:GQ:DP        1|0:82:26       0|0:50:16       1|0:100:52
+11     131174259       rs60510751      A       G       .       PASS    AA=A;DP=119     GT:GQ:DP        1|0:82:26       1|0:100:21      1|1:100:68
+22     23716309        rs56083857      C       T       .       PASS    AA=C;DP=104     GT:GQ:DP        1|0:82:27       0|0:36:17       1|0:100:61
+18     33630925        .       C       T       .       PASS    AA=C;DP=92      GT:GQ:DP        1|0:82:27       0|0:43:20       1|0:100:46
+20     60562284        .       A       G       .       PASS    AA=G;DP=70      GT:GQ:DP        1|0:82:28       0|0:23:7        1|0:100:35
+13     53139340        rs9316648       C       T       .       PASS    AA=T;DP=110     GT:GQ:DP        1|0:82:28       0|0:74:24       1|0:100:49
+15     93546756        rs8028105       C       T       .       PASS    AA=T;DP=114     GT:GQ:DP        1|0:82:28       1|0:87:17       1|1:100:68
+11     67232177        rs4930497       C       T       .       PASS    AA=.;DP=123     GT:GQ:DP        1|0:82:29       1|1:19:12       1|1:100:84
+15     49293845        rs2899471       G       A       .       PASS    AA=G;DP=138     GT:GQ:DP        1|0:82:31       1|0:76:26       1|1:100:83
+15     64518386        .       A       C       .       PASS    AA=A;DP=130     GT:GQ:DP        1|0:82:32       0|0:3:16        1|0:100:81
+3      195756724       rs705298        G       A       .       PASS    AA=A;DP=111     GT:GQ:DP        1|0:82:35       1|1:45:17       1|1:100:49
+13     88449351        .       G       A       .       PASS    AA=A;DP=57      GT:GQ:DP        1|0:83:12       1|0:100:15      1|1:60:21
+13     71336989        rs9318039       G       T       .       PASS    AA=G;DP=69      GT:GQ:DP        1|0:83:14       0|0:44:16       1|0:100:42
+10     10286161        .       T       C       .       PASS    AA=T;DP=69      GT:GQ:DP        1|0:83:14       0|0:56:18       1|0:93:26
+10     19390486        rs7081400       A       G       .       PASS    AA=A;DP=89      GT:GQ:DP        1|0:83:15       1|0:100:29      1|1:99:46
+10     107503487       .       G       A       .       PASS    AA=g;DP=88      GT:GQ:DP        1|0:83:17       0|0:56:27       1|0:100:45
+10     16065513        rs11253723      C       T       .       PASS    AA=T;DP=91      GT:GQ:DP        1|0:83:17       1|0:100:21      1|1:100:52
+6      93165750        rs2757026       C       T       .       PASS    AA=c;DP=89      GT:GQ:DP        1|0:83:17       1|1:22:16       1|1:100:55
+4      128493061       .       G       C       .       PASS    AA=G;DP=99      GT:GQ:DP        1|0:83:18       0|0:50:16       1|0:100:65
+5      167472854       rs10079060      G       A       .       PASS    AA=G;DP=78      GT:GQ:DP        1|0:83:18       0|0:7:7 1|0:100:55
+16     76710268        rs11649531      G       C       .       PASS    AA=-;DP=97      GT:GQ:DP        1|0:83:18       1|0:100:19      1|1:100:47
+4      69971635        rs4446390       G       A       .       PASS    AA=-;DP=84      GT:GQ:DP        1|0:83:19       1|1:48:16       1|1:59:38
+2      83089213        rs62148862      T       C       .       PASS    AA=C;DP=86      GT:GQ:DP        1|0:83:20       0|0:56:18       1|0:100:42
+1      188296279       rs10920415      A       C       .       PASS    AA=C;DP=97      GT:GQ:DP        1|0:83:20       1|1:60:21       1|1:100:60
+18     8694895 rs11081405      A       G       .       PASS    AA=G;DP=55      GT:GQ:DP        1|0:83:20       1|1:7:2 1|1:77:26
+7      54328051        .       G       A       .       PASS    AA=G;DP=109     GT:GQ:DP        1|0:83:21       0|0:44:15       1|0:100:76
+2      191419430       rs11886289      A       G       .       PASS    AA=A;DP=102     GT:GQ:DP        1|0:83:21       1|1:84:28       1|1:100:52
+21     36874834        rs9978893       G       T       .       PASS    AA=G;DP=119     GT:GQ:DP        1|0:83:22       0|0:74:24       1|0:100:72
+2      648595  rs7596758       T       G       .       PASS    AA=T;DP=99      GT:GQ:DP        1|0:83:22       1|0:100:20      1|1:100:55
+7      133501543       rs728578        A       G       .       PASS    AA=G;DP=139     GT:GQ:DP        1|0:83:23       0|0:80:28       1|0:100:38
+18     18046515        .       C       A       .       PASS    AA=C;DP=98      GT:GQ:DP        1|0:83:24       0|0:59:19       1|0:100:54
+2      148151304       rs12053111      G       A       .       PASS    AA=A;DP=123     GT:GQ:DP        1|0:83:24       1|0:100:22      1|1:75:27
+16     23397212        rs1135045       C       G       .       PASS    AA=g;DP=89      GT:GQ:DP        1|0:83:25       1|1:36:13       1|1:100:52
+22     44337349        rs4823224       G       A       .       PASS    AA=G;DP=82      GT:GQ:DP        1|0:83:28       0|0:32:10       1|0:93:35
+10     115403075       rs7088933       C       T       .       PASS    AA=C;DP=125     GT:GQ:DP        1|0:83:28       1|1:81:27       1|1:100:54
+1      29804202        .       T       G       .       PASS    AA=T;DP=132     GT:GQ:DP        1|0:83:30       0|0:40:24       1|0:100:76
+9      87919511        rs7875522       C       T       .       PASS    AA=C;DP=111     GT:GQ:DP        1|0:83:30       0|0:77:25       1|0:100:55
+2      16246972        rs34881930      G       A       .       PASS    AA=A;DP=163     GT:GQ:DP        1|0:83:36       0|0:78:31       1|0:100:97
+4      33380437        .       A       G       .       PASS    AA=A;DP=97      GT:GQ:DP        1|0:84:12       0|0:86:28       1|0:100:57
+7      3299581 .       C       T       .       PASS    AA=C;DP=81      GT:GQ:DP        1|0:84:13       1|0:71:17       1|1:95:49
+12     129968042       .       C       T       .       PASS    AA=C;DP=128     GT:GQ:DP        1|0:84:14       0|0:92:30       1|0:100:83
+8      139088173       rs56140030      T       C       .       PASS    AA=T;DP=80      GT:GQ:DP        1|0:84:15       0|0:32:18       1|0:100:50
+3      79017118        .       G       A       .       PASS    AA=G;DP=96      GT:GQ:DP        1|0:84:15       0|0:80:26       1|0:100:45
+3      144261984       rs10413 C       T       .       PASS    AA=C;DP=70      GT:GQ:DP        1|0:84:15       1|0:100:22      1|1:72:25
+3      166318909       .       T       G       .       PASS    AA=T;DP=82      GT:GQ:DP        1|0:84:16       0|0:80:26       1|0:100:41
+10     117241899       rs6585334       A       G       .       PASS    AA=A;DP=73      GT:GQ:DP        1|0:84:17       0|0:41:13       1|0:100:42
+20     12617892        rs1304518       T       C       .       PASS    AA=C;DP=90      GT:GQ:DP        1|0:84:17       0|0:59:20       1|0:100:56
+10     121163368       .       G       A       .       PASS    AA=G;DP=79      GT:GQ:DP        1|0:84:18       0|0:29:9        1|0:100:42
+11     127151694       .       A       G       .       PASS    AA=a;DP=100     GT:GQ:DP        1|0:84:18       0|0:41:22       1|0:100:56
+1      66230374        rs12040309      A       T       .       PASS    AA=A;DP=88;HM3  GT:GQ:DP        1|0:84:18       1|1:57:19       1|1:100:36
+5      57974438        rs6876683       T       C       .       PASS    AA=T;DP=94      GT:GQ:DP        1|0:84:19       0|0:56:19       1|0:100:59
+21     26127622        rs9974787       A       G       .       PASS    AA=G;DP=79      GT:GQ:DP        1|0:84:19       1|1:10:13       1|1:83:40
+10     17023545        .       G       C       .       PASS    AA=G;DP=95      GT:GQ:DP        1|0:84:20       0|0:41:13       1|0:100:64
+22     35864485        rs3218290       G       C       .       PASS    AA=G;DP=105     GT:GQ:DP        1|0:84:20       0|0:62:20       1|0:100:65
+9      103268314       rs9409333       G       A       .       PASS    AA=G;DP=90      GT:GQ:DP        1|0:84:20       1|0:100:16      1|1:100:54
+6      168450284       rs10945498      T       C       .       PASS    AA=C;DP=89      GT:GQ:DP        1|0:84:20       1|0:100:18      1|1:100:40
+12     101506101       rs4764898       A       G       .       PASS    AA=A;DP=80      GT:GQ:DP        1|0:84:20       1|0:44:19       1|1:72:27
+5      92615336        .       A       T       .       PASS    AA=T;DP=70      GT:GQ:DP        1|0:84:21       0|0:47:15       1|0:100:29
+4      18035887        .       G       A       .       PASS    AA=G;DP=118     GT:GQ:DP        1|0:84:21       0|0:57:25       1|0:100:71
+6      45987042        rs9367228       C       T       .       PASS    AA=C;DP=118     GT:GQ:DP        1|0:84:21       0|0:62:22       1|0:100:74
+7      108231768       .       G       A       .       PASS    AA=g;DP=123     GT:GQ:DP        1|0:84:21       0|0:68:23       1|0:100:81
+10     49867441        rs7086917       G       T       .       PASS    AA=G;DP=100     GT:GQ:DP        1|0:84:21       1|1:54:18       1|1:100:60
+10     129234160       .       T       G       .       PASS    AA=t;DP=111     GT:GQ:DP        1|0:84:22       0|0:56:18       1|0:100:65
+2      76313310        rs7568877       C       G       .       PASS    AA=C;DP=118     GT:GQ:DP        1|0:84:22       0|0:80:27       1|0:100:60
+12     94585195        .       C       T       .       PASS    AA=C;DP=80      GT:GQ:DP        1|0:84:23       0|0:35:13       1|0:100:33
+9      101085381       rs504640        G       C       .       PASS    AA=C;DP=93      GT:GQ:DP        1|0:84:23       1|0:100:17      1|1:100:42
+19     12088448        rs10427124      C       A       .       PASS    AA=C;DP=104     GT:GQ:DP        1|0:84:24       0|0:28:18       1|0:100:63
+14     76041911        rs933628        G       C       .       PASS    AA=C;DP=130     GT:GQ:DP        1|0:84:24       1|1:66:24       1|1:100:81
+8      56889843        rs60155473      A       G       .       PASS    AA=a;DP=83      GT:GQ:DP        1|0:84:25       0|0:50:17       1|0:51:33
+14     40847490        rs17111867      A       G       .       PASS    AA=A;DP=96      GT:GQ:DP        1|0:84:25       0|0:53:17       1|0:100:53
+19     51018893        rs7251942       C       T       .       PASS    AA=C;DP=107     GT:GQ:DP        1|0:84:25       1|0:91:13       1|1:100:68
+18     12079546        rs9966458       C       T       .       PASS    AA=c;DP=127     GT:GQ:DP        1|0:84:25       1|0:92:23       1|1:100:77
+15     20307114        .       C       A       .       PASS    AA=.;DP=106     GT:GQ:DP        1|0:84:26       0|0:27:19       1|0:100:62
+7      100231077       rs314343        C       G       .       PASS    AA=G;DP=79      GT:GQ:DP        1|0:84:26       1|1:36:13       1|1:75:34
+1      19580538        rs10799805      C       T       .       PASS    AA=C;DP=103     GT:GQ:DP        1|0:84:27       1|0:14:13       1|1:100:62
+6      11878691        rs760788        C       T       .       PASS    AA=T;DP=131     GT:GQ:DP        1|0:84:34       1|1:42:16       1|1:100:80
+3      194794450       rs281797        C       T       .       PASS    AA=T;DP=151     GT:GQ:DP        1|0:84:42       1|1:51:17       1|1:100:51
+6      144157048       rs62427431      T       A       .       PASS    AA=T;DP=72      GT:GQ:DP        1|0:84:9        1|0:100:19      1|1:96:45
+12     117737803       .       A       T       .       PASS    AA=A;DP=69      GT:GQ:DP        1|0:85:10       0|0:47:16       1|0:100:32
+7      80684310        rs10808283      T       A       .       PASS    AA=T;DP=83      GT:GQ:DP        1|0:85:13       1|0:93:11       1|1:88:44
+10     55332440        rs2921922       T       C       .       PASS    AA=t;DP=73      GT:GQ:DP        1|0:85:14       0|0:26:9        1|0:100:47
+19     58928180        rs7246713       A       C       .       PASS    AA=A;DP=101     GT:GQ:DP        1|0:85:15       0|0:48:21       1|0:100:66
+3      167618352       rs35628543      C       T       .       PASS    AA=C;DP=78      GT:GQ:DP        1|0:85:15       0|0:56:19       1|0:100:44
+1      194047725       rs2989987       C       T       .       PASS    AA=C;DP=91;HM2  GT:GQ:DP        1|0:85:15       0|0:71:23       1|0:100:56
+1      43155714        rs11210761      A       G       .       PASS    AA=A;DP=76      GT:GQ:DP        1|0:85:16       0|0:11:4        1|0:100:44
+11     38279200        rs7113941       G       A       .       PASS    AA=G;DP=62      GT:GQ:DP        1|0:85:16       1|0:90:13       1|1:51:19
+2      13907054        rs1454178       A       G       .       PASS    AA=A;DP=92      GT:GQ:DP        1|0:85:17       1|1:30:25       1|1:100:53
+1      226324243       .       G       A       .       PASS    AA=-;DP=84      GT:GQ:DP        1|0:85:18       0|0:26:8        1|0:100:60
+8      27935456        rs7459596       C       T       .       PASS    AA=T;DP=101     GT:GQ:DP        1|0:85:18       0|0:53:17       1|0:100:67
+4      65018025        rs2714936       C       T       .       PASS    AA=C;DP=88      GT:GQ:DP        1|0:85:20       0|0:44:14       1|0:100:52
+15     78374870        rs59562679      A       G       .       PASS    AA=G;DP=81      GT:GQ:DP        1|0:85:20       1|0:67:11       1|1:100:41
+1      2882784 rs12096719      A       G       .       PASS    AA=A;DP=96;HM2  GT:GQ:DP        1|0:85:21       0|0:44:14       1|0:100:60
+20     10337828        rs6104603       C       A       .       PASS    AA=A;DP=103     GT:GQ:DP        1|0:85:21       0|0:64:27       1|0:100:56
+13     86673521        .       C       T       .       PASS    AA=C;DP=132     GT:GQ:DP        1|0:85:22       0|0:56:25       1|0:100:83
+10     59152865        rs10740711      C       T       .       PASS    AA=C;DP=109     GT:GQ:DP        1|0:85:22       1|1:51:17       1|1:100:71
+6      32731371        rs9273338       A       T       .       PASS    AA=N;DP=113     GT:GQ:DP        1|0:85:23       0|0:89:29       1|0:100:61
+13     108216991       rs16973067      C       T       .       PASS    AA=C;DP=125     GT:GQ:DP        1|0:85:24       0|0:57:30       1|0:100:72
+2      156327520       rs34640282      C       T       .       PASS    AA=T;DP=131     GT:GQ:DP        1|0:85:24       0|0:77:25       1|0:100:81
+11     82867048        rs10501541      T       G       .       PASS    AA=T;DP=113     GT:GQ:DP        1|0:85:25       0|0:50:17       1|0:100:63
+11     2194143 rs4930051       G       C       .       PASS    AA=G;DP=92      GT:GQ:DP        1|0:85:25       1|1:36:12       1|1:100:51
+X      154772842       rs5983808       G       C       .       PASS    AA=G;DP=103     GT:GQ:DP        1|0:85:25       1|1:87:31       1|1:100:38
+18     69793962        rs9957991       C       G       .       PASS    AA=G;DP=109     GT:GQ:DP        1|0:85:27       0|0:77:25       1|0:100:58
+7      7641425 rs28916321      C       T       .       PASS    AA=C;DP=151     GT:GQ:DP        1|0:85:28       0|0:74:24       1|0:100:102
+3      120157787       .       A       G       .       PASS    AA=A;DP=124     GT:GQ:DP        1|0:85:29       0|0:71:24       1|0:100:71
+2      23442312        rs2577706       T       C       .       PASS    AA=T;DP=140     GT:GQ:DP        1|0:85:30       0|0:56:18       1|0:100:96
+21     28651234        rs1236407       C       T       .       PASS    AA=c;DP=118     GT:GQ:DP        1|0:85:32       1|1:66:22       1|1:100:65
+3      185638102       rs7429010       A       G       .       PASS    AA=G;DP=132     GT:GQ:DP        1|0:85:35       1|1:87:29       1|1:100:68
+10     53591760        rs10824173      C       A       .       PASS    AA=A;DP=59      GT:GQ:DP        1|0:86:10       1|1:48:16       1|1:75:25
+5      86277228        rs7713621       T       C       .       PASS    AA=t;DP=76      GT:GQ:DP        1|0:86:13       1|1:11:15       1|1:100:40
+3      56488711        rs1973348       T       A       .       PASS    AA=T;DP=68      GT:GQ:DP        1|0:86:14       0|0:59:19       1|0:100:24
+4      99879698        rs34285632      C       T       .       PASS    AA=C;DP=108     GT:GQ:DP        1|0:86:14       0|0:59:20       1|0:100:75
+6      48665529        .       C       T       .       PASS    AA=C;DP=69      GT:GQ:DP        1|0:86:15       0|0:56:19       1|0:100:35
+16     76309402        .       T       C       .       PASS    AA=T;DP=70      GT:GQ:DP        1|0:86:16       0|0:41:14       1|0:100:45
+4      30812037        .       T       C       .       PASS    AA=T;DP=83      GT:GQ:DP        1|0:86:16       0|0:65:22       1|0:100:45
+9      1857608 rs57471120      A       G       .       PASS    AA=A;DP=108     GT:GQ:DP        1|0:86:16       1|1:38:24       1|1:100:68
+5      93109901        rs7729237       A       G       .       PASS    AA=A;DP=91      GT:GQ:DP        1|0:86:17       0|0:50:16       1|0:100:49
+5      83417755        rs6859618       C       T       .       PASS    AA=C;DP=65      GT:GQ:DP        1|0:86:17       0|0:8:9 1|0:100:32
+5      161452225       .       G       A       .       PASS    AA=G;DP=101     GT:GQ:DP        1|0:86:18       0|0:41:14       1|0:100:68
+14     29181566        rs7143801       A       T       .       PASS    AA=T;DP=81      GT:GQ:DP        1|0:86:18       0|0:47:15       1|0:100:47
+15     99714622        .       G       C       .       PASS    AA=C;DP=112     GT:GQ:DP        1|0:86:19       0|0:49:24       1|0:100:31
+3      81710554        rs28478451      G       A       .       PASS    AA=G;DP=78      GT:GQ:DP        1|0:86:19       1|0:70:15       1|1:94:44
+3      12782781        rs11712581      T       C       .       PASS    AA=T;DP=104     GT:GQ:DP        1|0:86:19       1|1:46:22       1|1:100:63
+2      69434474        .       C       T       .       PASS    AA=C;DP=92      GT:GQ:DP        1|0:86:20       0|0:41:13       1|0:100:62
+15     35358923        rs11637382      C       T       .       PASS    AA=T;DP=115     GT:GQ:DP        1|0:86:20       1|0:100:29      1|1:100:67
+6      86957904        .       G       A       .       PASS    AA=.;DP=78      GT:GQ:DP        1|0:86:21       0|0:44:14       1|0:100:41
+4      115707403       .       C       A       .       PASS    AA=C;DP=90      GT:GQ:DP        1|0:86:21       0|0:50:16       1|0:100:54
+17     64118255        rs58448318      C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        1|0:86:23       0|0:21:17       1|0:100:29
+6      153889250       rs10485218      C       T       .       PASS    AA=T;DP=120     GT:GQ:DP        1|0:86:23       0|0:59:19       1|0:100:77
+13     65038669        rs1855182       G       T       .       PASS    AA=g;DP=95      GT:GQ:DP        1|0:86:23       1|1:45:15       1|1:100:44
+14     73339109        .       C       A       .       PASS    AA=C;DP=110     GT:GQ:DP        1|0:86:25       0|0:31:19       1|0:100:68
+1      62042968        .       C       T       .       PASS    AA=C;DP=126     GT:GQ:DP        1|0:86:25       0|0:49:22       1|0:100:80
+11     107610510       rs4987910       A       G       .       PASS    AA=A;DP=106     GT:GQ:DP        1|0:86:25       0|0:51:22       1|0:100:62
+5      106688241       rs381542        C       T       .       PASS    AA=T;DP=77      GT:GQ:DP        1|0:86:25       1|1:33:11       1|1:90:30
+5      155522504       .       G       A       .       PASS    AA=G;DP=121     GT:GQ:DP        1|0:86:26       0|0:48:23       1|0:100:74
+11     78314370        .       G       A       .       PASS    AA=G;DP=107     GT:GQ:DP        1|0:86:26       0|0:63:27       1|0:100:41
+14     46628477        rs2148511       A       T       .       PASS    AA=T;DP=110     GT:GQ:DP        1|0:86:26       0|0:71:26       1|0:100:58
+4      40527067        rs3816099       C       T       .       PASS    AA=C;DP=100     GT:GQ:DP        1|0:86:26       1|0:91:19       1|1:100:55
+8      77509223        .       T       G       .       PASS    AA=T;DP=82      GT:GQ:DP        1|0:86:26       1|1:35:17       1|1:81:27
+20     55561393        .       G       T       .       PASS    AA=G;DP=125     GT:GQ:DP        1|0:86:27       0|0:100:35      1|0:100:62
+6      170378511       .       C       G       .       PASS    AA=C;DP=100     GT:GQ:DP        1|0:86:29       0|0:15:15       1|0:100:43
+19     1075303 .       C       G       .       PASS    AA=C;DP=97      GT:GQ:DP        1|0:86:29       0|0:41:13       1|0:100:54
+9      129651726       rs1998923       G       A       .       PASS    AA=g;DP=144     GT:GQ:DP        1|0:86:33       1|1:27:15       1|1:100:96
+1      230582339       rs35008657      C       T       .       PASS    AA=C;DP=95      GT:GQ:DP        1|0:86:34       0|0:35:11       1|0:100:41
+3      170169342       rs17462877      G       C       .       PASS    AA=G;DP=90      GT:GQ:DP        1|0:87:11       0|0:60:24       1|0:100:54
+4      156702337       rs17033157      G       C       .       PASS    AA=G;DP=79      GT:GQ:DP        1|0:87:13       0|0:23:9        1|0:100:60
+13     81929603        rs8002651       A       T       .       PASS    AA=T;DP=86      GT:GQ:DP        1|0:87:13       1|1:45:15       1|1:100:58
+16     81683029        .       C       G       .       PASS    AA=C;DP=75      GT:GQ:DP        1|0:87:14       0|0:41:13       1|0:100:48
+13     55252640        rs4548738       G       A       .       PASS    AA=A;DP=84      GT:GQ:DP        1|0:87:14       1|0:58:18       1|1:100:51
+10     14890609        rs61197201      G       A       .       PASS    AA=G;DP=63      GT:GQ:DP        1|0:87:15       0|0:39:16       1|0:100:30
+6      65655869        rs9453098       A       G       .       PASS    AA=A;DP=67      GT:GQ:DP        1|0:87:15       1|0:49:11       1|1:100:40
+18     3148135 .       C       T       .       PASS    AA=A;DP=77      GT:GQ:DP        1|0:87:16       0|0:44:14       1|0:100:49
+12     109293724       .       G       C       .       PASS    AA=G;DP=76      GT:GQ:DP        1|0:87:17       0|0:26:9        1|0:100:49
+14     50638271        rs12587121      T       C       .       PASS    AA=T;DP=89      GT:GQ:DP        1|0:87:17       1|1:39:14       1|1:100:57
+19     10154024        .       C       G       .       PASS    AA=G;DP=91      GT:GQ:DP        1|0:87:17       1|1:72:24       1|1:100:48
+4      32998542        rs2585941       G       A       .       PASS    AA=A;DP=71      GT:GQ:DP        1|0:87:18       0|0:44:14       1|0:100:39
+2      196454339       rs13409329      T       C       .       PASS    AA=T;DP=106     GT:GQ:DP        1|0:87:18       0|0:62:20       1|0:100:66
+12     14375438        rs2160726       G       A       .       PASS    AA=G;DP=115     GT:GQ:DP        1|0:87:19       0|0:47:15       1|0:100:82
+8      71126559        rs13259222      T       G       .       PASS    AA=T;DP=102     GT:GQ:DP        1|0:87:19       0|0:62:20       1|0:100:63
+6      81895576        rs7752313       G       C       .       PASS    AA=G;DP=77      GT:GQ:DP        1|0:87:19       1|1:57:19       1|1:100:38
+1      89024207        .       A       G       .       PASS    AA=G;DP=92      GT:GQ:DP        1|0:87:19       1|1:69:23       1|1:86:49
+15     24027575        rs7180892       C       T       .       PASS    AA=C;DP=92      GT:GQ:DP        1|0:87:20       0|0:59:20       1|0:100:52
+2      156261801       .       G       C       .       PASS    AA=G;DP=89      GT:GQ:DP        1|0:87:21       0|0:44:16       1|0:100:53
+13     89393949        rs9588804       A       G       .       PASS    AA=G;DP=108     GT:GQ:DP        1|0:87:21       1|1:48:16       1|1:100:70
+3      143063173       rs4683634       C       T       .       PASS    AA=G;DP=109     GT:GQ:DP        1|0:87:22       0|0:59:19       1|0:100:68
+18     74710484        rs10468811      G       T       .       PASS    AA=G;DP=108     GT:GQ:DP        1|0:87:22       0|0:65:21       1|0:100:66
+9      11511722        .       C       T       .       PASS    AA=C;DP=103     GT:GQ:DP        1|0:87:23       0|0:44:15       1|0:100:63
+3      119330718       rs9824534       T       A       .       PASS    AA=T;DP=112     GT:GQ:DP        1|0:87:23       0|0:98:34       1|0:100:56
+10     11330300        .       C       T       .       PASS    AA=C;DP=96      GT:GQ:DP        1|0:87:24       0|0:32:10       1|0:100:61
+3      63304220        .       C       G       .       PASS    AA=C;DP=123     GT:GQ:DP        1|0:87:24       0|0:56:19       1|0:100:85
+9      77144635        rs12115408      A       G       .       PASS    AA=A;DP=109     GT:GQ:DP        1|0:87:24       0|0:74:24       1|0:100:62
+12     127404005       rs58427859      G       A       .       PASS    AA=G;DP=124     GT:GQ:DP        1|0:87:25       0|0:41:13       1|0:100:45
+6      48445152        rs12206822      A       C       .       PASS    AA=A;DP=122     GT:GQ:DP        1|0:87:25       0|0:89:31       1|0:100:65
+11     103985499       rs11226443      G       A       .       PASS    AA=A;DP=128     GT:GQ:DP        1|0:87:25       1|1:38:24       1|1:100:77
+2      1475429 rs11687944      C       G       .       PASS    AA=C;DP=113     GT:GQ:DP        1|0:87:26       0|0:56:18       1|0:100:67
+16     56890876        rs56688470      A       T       .       PASS    AA=A;DP=87      GT:GQ:DP        1|0:87:26       1|0:100:22      1|1:100:40
+20     53729449        rs7348848       G       A       .       PASS    AA=G;DP=116     GT:GQ:DP        1|0:87:27       1|1:87:29       1|1:100:60
+15     75970205        rs4886535       C       T       .       PASS    AA=.;DP=102     GT:GQ:DP        1|0:87:29       1|1:25:17       1|1:100:57
+5      171536800       rs61677863      C       T       .       PASS    AA=C;DP=77      GT:GQ:DP        1|0:87:34       0|0:26:9        1|0:70:28
+6      70746973        rs11969894      C       T       .       PASS    AA=c;DP=110     GT:GQ:DP        1|0:87:34       0|0:59:19       1|0:100:57
+14     89116652        rs44812 G       A       .       PASS    AA=A;DP=117     GT:GQ:DP        1|0:87:35       1|1:72:24       1|1:100:58
+2      68483871        rs6546397       G       A       .       PASS    AA=g;DP=141     GT:GQ:DP        1|0:87:39       0|0:20:23       1|0:100:76
+11     90151432        rs11019178      T       C       .       PASS    AA=T;DP=78      GT:GQ:DP        1|0:88:11       0|0:74:26       1|0:100:42
+2      158805054       .       G       C       .       PASS    AA=G;DP=113     GT:GQ:DP        1|0:88:13       0|0:83:27       1|0:100:73
+4      169344017       rs517108        C       T       .       PASS    AA=C;DP=79      GT:GQ:DP        1|0:88:15       0|0:35:13       1|0:100:50
+9      10114584        rs10958890      G       A       .       PASS    AA=G;DP=89      GT:GQ:DP        1|0:88:15       1|0:100:24      1|1:100:50
+5      103421654       .       G       A       .       PASS    AA=G;DP=90      GT:GQ:DP        1|0:88:16       0|0:36:22       1|0:100:50
+3      88195274        rs1367615       G       A       .       PASS    AA=a;DP=92      GT:GQ:DP        1|0:88:16       1|1:48:16       1|1:100:61
+17     3846585 .       G       A       .       PASS    AA=G;DP=113     GT:GQ:DP        1|0:88:17       0|0:92:30       1|0:100:64
+8      507965  rs2878545       G       A       .       PASS    AA=G;DP=94      GT:GQ:DP        1|0:88:20       0|0:47:15       1|0:100:57
+18     23823590        rs17522305      A       T       .       PASS    AA=A;DP=125     GT:GQ:DP        1|0:88:21       0|0:32:20       1|0:100:70
+3      171624002       rs10513681      T       C       .       PASS    AA=T;DP=126     GT:GQ:DP        1|0:88:21       0|0:77:27       1|0:100:37
+17     5801906 rs55857183      G       A       .       PASS    AA=g;DP=85      GT:GQ:DP        1|0:88:22       0|0:44:14       1|0:100:50
+10     60808249        rs956366        T       G       .       PASS    AA=G;DP=87      GT:GQ:DP        1|0:88:25       0|0:21:17       1|0:100:45
+11     11045391        rs1486531       G       A       .       PASS    AA=A;DP=133     GT:GQ:DP        1|0:88:25       1|0:70:21       1|1:100:87
+7      156651922       .       G       A       .       PASS    AA=G;DP=107     GT:GQ:DP        1|0:88:25       1|1:21:19       1|1:97:64
+8      86700760        rs16914027      T       C       .       PASS    AA=T;DP=106     GT:GQ:DP        1|0:88:26       0|0:26:19       1|0:100:65
+4      178610978       .       G       A       .       PASS    AA=G;DP=107     GT:GQ:DP        1|0:88:26       0|0:71:23       1|0:100:59
+11     43926335        rs11037752      G       T       .       PASS    AA=T;DP=115     GT:GQ:DP        1|0:88:27       1|0:64:16       1|1:100:72
+2      182280048       rs2119516       G       C       .       PASS    AA=C;DP=117     GT:GQ:DP        1|0:88:27       1|1:64:33       1|1:100:57
+18     38011318        rs7233536       G       A       .       PASS    AA=A;DP=129     GT:GQ:DP        1|0:88:28       1|0:100:33      1|1:100:68
+4      38906166        rs11730558      G       A       .       PASS    AA=G;DP=135     GT:GQ:DP        1|0:88:29       0|0:100:35      1|0:100:74
+2      183970333       .       G       A       .       PASS    AA=G;DP=97      GT:GQ:DP        1|0:88:29       0|0:56:19       1|0:100:38
+12     112856554       rs11066823      G       C       .       PASS    AA=C;DP=112     GT:GQ:DP        1|0:88:29       1|0:75:22       1|1:100:60
+16     12693967        rs12051089      C       T       .       PASS    AA=C;DP=102     GT:GQ:DP        1|0:88:30       1|1:30:21       1|1:86:52
+19     35784419        .       G       T       .       PASS    AA=G;DP=91      GT:GQ:DP        1|0:88:30       1|1:36:12       1|1:100:50
+6      137865781       .       C       T       .       PASS    AA=c;DP=109     GT:GQ:DP        1|0:88:31       1|0:100:23      1|1:100:54
+15     85076184        rs1869184       G       A       .       PASS    AA=G;DP=140     GT:GQ:DP        1|0:88:32       1|0:100:29      1|1:99:35
+11     102942041       rs2218851       T       C       .       PASS    AA=T;DP=145     GT:GQ:DP        1|0:88:37       1|0:100:37      1|1:100:69
+5      172666908       rs62378974      C       T       .       PASS    AA=T;DP=144     GT:GQ:DP        1|0:88:42       1|0:87:28       1|1:100:77
+9      17170593        .       G       A       .       PASS    AA=G;DP=81      GT:GQ:DP        1|0:89:12       0|0:50:16       1|0:100:49
+2      81524512        rs1435892       A       G       .       PASS    AA=A;DP=70      GT:GQ:DP        1|0:89:14       1|1:24:13       1|1:93:44
+2      212318150       rs13004180      A       C       .       PASS    AA=A;DP=71      GT:GQ:DP        1|0:89:16       0|0:38:13       1|0:100:31
+8      19653756        rs4921673       A       C       .       PASS    AA=a;DP=79      GT:GQ:DP        1|0:89:16       1|1:13:13       1|1:97:51
+7      85678644        rs10266683      G       A       .       PASS    AA=T;DP=114     GT:GQ:DP        1|0:89:17       0|0:86:29       1|0:100:62
+4      178544103       rs35290030      A       G       .       PASS    AA=A;DP=84      GT:GQ:DP        1|0:89:17       1|1:48:17       1|1:93:48
+7      70611086        rs28391523      A       C       .       PASS    AA=A;DP=83      GT:GQ:DP        1|0:89:19       0|0:50:16       1|0:100:51
+18     68803976        rs7235297       A       G       .       PASS    AA=A;DP=98      GT:GQ:DP        1|0:89:20       0|0:51:22       1|0:100:57
+14     59886702        rs57349425      A       G       .       PASS    AA=A;DP=116     GT:GQ:DP        1|0:89:20       0|0:62:21       1|0:100:75
+14     32222080        .       G       A       .       PASS    AA=A;DP=90      GT:GQ:DP        1|0:89:20       1|0:16:14       1|1:100:55
+11     78891185        rs10793383      G       A       .       PASS    AA=A;DP=114     GT:GQ:DP        1|0:89:20       1|0:98:26       1|1:100:67
+4      184782069       rs8180305       C       T       .       PASS    AA=C;DP=85      GT:GQ:DP        1|0:89:21       0|0:44:14       1|0:100:40
+2      123950153       rs13023364      G       A       .       PASS    AA=N;DP=81      GT:GQ:DP        1|0:89:21       1|1:45:19       1|1:69:30
+6      78810394        rs2223968       T       C       .       PASS    AA=T;DP=100     GT:GQ:DP        1|0:89:21       1|1:51:18       1|1:100:61
+15     44683706        .       G       T       .       PASS    AA=G;DP=115     GT:GQ:DP        1|0:89:23       0|0:34:23       1|0:100:67
+17     70785810        rs9901041       G       A       .       PASS    AA=G;DP=95      GT:GQ:DP        1|0:89:23       0|0:44:15       1|0:100:47
+5      106159242       .       G       A       .       PASS    AA=A;DP=96      GT:GQ:DP        1|0:89:23       0|0:59:19       1|0:100:48
+21     35924460        rs2835051       C       A       .       PASS    AA=C;DP=77      GT:GQ:DP        1|0:89:23       1|1:54:18       1|1:87:29
+7      17727762        rs2723586       G       T       .       PASS    AA=G;DP=104     GT:GQ:DP        1|0:89:24       0|0:77:25       1|0:100:55
+1      110479242       rs7528971       G       A       .       PASS    AA=g;DP=146;HM2 GT:GQ:DP        1|0:89:24       0|0:86:28       1|0:100:90
+13     35045940        rs10507425      T       C       .       PASS    AA=T;DP=98      GT:GQ:DP        1|0:89:24       1|1:63:21       1|1:97:47
+5      28432246        rs7704611       G       A       .       PASS    AA=G;DP=99      GT:GQ:DP        1|0:89:25       0|0:47:15       1|0:100:59
+9      105081581       rs10990663      G       A       .       PASS    AA=A;DP=84      GT:GQ:DP        1|0:89:25       1|0:100:27      1|1:48:23
+9      129734065       rs4836592       A       G       .       PASS    AA=G;DP=104     GT:GQ:DP        1|0:89:25       1|1:15:19       1|1:91:47
+3      14480032        .       T       C       .       PASS    AA=T;DP=77      GT:GQ:DP        1|0:89:26       0|0:38:14       1|0:100:33
+14     37454342        rs58860835      C       G       .       PASS    AA=C;DP=110     GT:GQ:DP        1|0:89:26       0|0:65:21       1|0:100:64
+4      85860036        rs9306982       C       T       .       PASS    AA=C;DP=107     GT:GQ:DP        1|0:89:26       1|0:100:22      1|1:100:59
+14     81235972        rs1958212       G       A       .       PASS    AA=A;DP=110     GT:GQ:DP        1|0:89:26       1|0:100:28      1|1:100:52
+1      154952356       rs12121617      C       A       .       PASS    AA=c;DP=112     GT:GQ:DP        1|0:89:27       0|0:35:22       1|0:100:53
+13     61915219        rs1016194       G       A       .       PASS    AA=A;DP=127     GT:GQ:DP        1|0:89:27       0|0:68:22       1|0:100:76
+20     6656274 .       G       A       .       PASS    AA=G;DP=118     GT:GQ:DP        1|0:89:27       0|0:83:28       1|0:100:65
+12     110291634       rs933398        C       G       .       PASS    AA=C;DP=91      GT:GQ:DP        1|0:89:28       0|0:35:11       1|0:100:52
+18     2840631 rs614841        C       G       .       PASS    AA=G;DP=101     GT:GQ:DP        1|0:89:28       1|1:57:19       1|1:100:56
+11     114873727       rs314478        G       C       .       PASS    AA=C;DP=110     GT:GQ:DP        1|0:89:28       1|1:78:26       1|1:100:56
+11     18282632        rs11024611      G       A       .       PASS    AA=G;DP=115     GT:GQ:DP        1|0:89:29       0|0:65:21       1|0:100:64
+5      734456  rs56352513      C       T       .       PASS    AA=c;DP=104     GT:GQ:DP        1|0:89:29       1|1:28:15       1|1:89:52
+17     9560146 .       T       C       .       PASS    AA=t;DP=94      GT:GQ:DP        1|0:89:32       0|0:19:26       1|0:100:25
+5      55546800        .       T       C       .       PASS    AA=C;DP=130     GT:GQ:DP        1|0:89:32       0|0:56:18       1|0:100:80
+20     41774398        .       G       A       .       PASS    AA=G;DP=120     GT:GQ:DP        1|0:89:34       0|0:32:10       1|0:100:75
+5      72912532        rs343118        C       A       .       PASS    AA=C;DP=105     GT:GQ:DP        1|0:89:34       0|0:53:17       1|0:100:55
+16     64748893        .       T       C       .       PASS    AA=T;DP=128     GT:GQ:DP        1|0:89:35       1|0:100:23      1|1:100:57
+1      161025394       rs57717002      T       G       .       PASS    AA=T;DP=128     GT:GQ:DP        1|0:89:36       0|0:21:21       1|0:100:71
+X      147010252       .       C       T       .       PASS    AA=C;DP=71      GT:GQ:DP        1|0:8:6 0|0:34:11       1|0:100:27
+X      35365439        rs5928860       C       T       .       PASS    AA=C;DP=58      GT:GQ:DP        1|0:8:7 0|0:28:9        1|0:100:33
+2      84637863        .       A       G       .       PASS    AA=A;DP=87      GT:GQ:DP        1|0:90:10       0|0:47:15       1|0:100:61
+18     66500456        .       A       G       .       PASS    AA=A;DP=72      GT:GQ:DP        1|0:90:11       0|0:47:15       1|0:100:34
+10     87642385        rs6585985       G       A       .       PASS    AA=g;DP=73      GT:GQ:DP        1|0:90:11       1|1:34:17       1|1:52:33
+10     55925212        rs9416367       C       T       .       PASS    AA=T;DP=91      GT:GQ:DP        1|0:90:13       0|0:47:15       1|0:100:62
+12     89917538        .       A       T       .       PASS    AA=A;DP=80      GT:GQ:DP        1|0:90:15       0|0:37:16       1|0:100:45
+16     58760815        .       G       C       .       PASS    AA=G;DP=63      GT:GQ:DP        1|0:90:16       0|0:53:17       1|0:100:23
+7      121615224       .       G       A       .       PASS    AA=G;DP=93      GT:GQ:DP        1|0:90:17       0|0:68:23       1|0:100:53
+18     69310538        .       G       A       .       PASS    AA=G;DP=83      GT:GQ:DP        1|0:90:18       0|0:56:18       1|0:100:52
+2      223245605       rs59460755      G       C       .       PASS    AA=G;DP=104     GT:GQ:DP        1|0:90:18       0|0:77:26       1|0:100:61
+7      37479100        rs6980241       T       C       .       PASS    AA=C;DP=84      GT:GQ:DP        1|0:90:19       1|1:42:14       1|1:100:51
+2      53618294        rs17044876      T       C       .       PASS    AA=C;DP=120     GT:GQ:DP        1|0:90:20       0|0:98:32       1|0:100:69
+17     67617202        rs28629915      T       C       .       PASS    AA=T;DP=107     GT:GQ:DP        1|0:90:20       1|0:100:24      1|1:100:62
+18     17835254        .       G       A       .       PASS    AA=g;DP=106     GT:GQ:DP        1|0:90:21       0|0:47:15       1|0:100:70
+1      235438528       rs617676        C       G       .       PASS    AA=G;DP=81      GT:GQ:DP        1|0:90:21       0|0:53:18       1|0:100:41
+10     18427752        rs4573589       G       A       .       PASS    AA=A;DP=97      GT:GQ:DP        1|0:90:22       1|0:100:17      1|1:100:56
+1      101959532       rs17125238      T       C       .       PASS    AA=T;DP=93;HM2;HM3      GT:GQ:DP        1|0:90:22       1|0:100:27      1|1:91:42
+12     133791  rs7306789       C       T       .       PASS    AA=C;DP=82      GT:GQ:DP        1|0:90:22       1|0:15:9        1|1:80:38
+3      17613948        rs56998839      C       G       .       PASS    AA=C;DP=120     GT:GQ:DP        1|0:90:23       0|0:65:23       1|0:100:73
+8      139206426       rs57975371      G       A       .       PASS    AA=A;DP=77      GT:GQ:DP        1|0:90:24       0|0:41:13       1|0:100:41
+16     11313568        .       G       A       .       PASS    AA=G;DP=99      GT:GQ:DP        1|0:90:24       0|0:56:18       1|0:100:55
+2      150318167       rs11686137      G       A       .       PASS    AA=G;DP=88      GT:GQ:DP        1|0:90:24       1|0:5:17        1|1:100:49
+1      157216129       rs856135        G       A       .       PASS    AA=g;DP=99;HM2  GT:GQ:DP        1|0:90:24       1|1:51:17       1|1:100:58
+8      22017319        rs57024580      C       T       .       PASS    AA=C;DP=79      GT:GQ:DP        1|0:90:25       0|0:35:11       1|0:100:33
+3      34230721        rs35297130      C       T       .       PASS    AA=C;DP=100     GT:GQ:DP        1|0:90:25       1|1:14:19       1|1:100:57
+5      74992877        rs253415        C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        1|0:90:25       1|1:44:24       1|1:100:61
+18     44552677        rs57592070      A       G       .       PASS    AA=A;DP=121     GT:GQ:DP        1|0:90:26       0|0:53:18       1|0:100:77
+18     13978536        rs1941099       C       G       .       PASS    AA=g;DP=103     GT:GQ:DP        1|0:90:27       1|1:11:14       1|1:100:52
+5      20627618        rs60708658      C       T       .       PASS    AA=C;DP=71      GT:GQ:DP        1|0:90:29       0|0:35:17       1|0:100:21
+18     21838821        rs9956068       T       A       .       PASS    AA=A;DP=110     GT:GQ:DP        1|0:90:31       0|0:43:25       1|0:100:56
+15     23750662        rs4906821       C       T       .       PASS    AA=C;DP=134     GT:GQ:DP        1|0:90:32       1|0:85:19       1|1:100:84
+1      47763270        rs57025768      G       A       .       PASS    AA=G;DP=155     GT:GQ:DP        1|0:90:37       0|0:100:33      1|0:100:85
+7      108905978       rs1881448       A       G       .       PASS    AA=A;DP=79      GT:GQ:DP        1|0:91:14       0|0:35:11       1|0:100:53
+11     26354916        rs61877727      G       A       .       PASS    AA=G;DP=84      GT:GQ:DP        1|0:91:14       0|0:56:18       1|0:100:52
+13     63399043        rs17070974      C       T       .       PASS    AA=T;DP=90      GT:GQ:DP        1|0:91:14       0|0:59:19       1|0:100:57
+6      153361475       .       G       A       .       PASS    AA=G;DP=76      GT:GQ:DP        1|0:91:14       1|0:100:15      1|1:98:47
+4      89956480        rs7694958       C       T       .       PASS    AA=c;DP=72      GT:GQ:DP        1|0:91:14       1|1:39:13       1|1:100:45
+5      62875987        rs255401        A       G       .       PASS    AA=N;DP=98      GT:GQ:DP        1|0:91:15       1|1:72:24       1|1:100:54
+5      72672131        rs2973924       G       C       .       PASS    AA=C;DP=81      GT:GQ:DP        1|0:91:16       0|0:50:17       1|0:100:48
+12     74351666        .       A       C       .       PASS    AA=A;DP=91      GT:GQ:DP        1|0:91:16       0|0:77:25       1|0:100:50
+5      80142521        rs32999 A       G       .       PASS    AA=A;DP=86      GT:GQ:DP        1|0:91:16       1|1:11:17       1|1:53:29
+10     134513490       rs11146545      T       C       .       PASS    AA=C;DP=57      GT:GQ:DP        1|0:91:16       1|1:21:7        1|1:90:31
+10     87547329        .       C       T       .       PASS    AA=T;DP=63      GT:GQ:DP        1|0:91:17       1|0:76:13       1|1:53:25
+3      132530600       rs17275526      C       A       .       PASS    AA=C;DP=72      GT:GQ:DP        1|0:91:18       0|0:21:15       1|0:100:39
+10     21654483        .       T       C       .       PASS    AA=T;DP=67      GT:GQ:DP        1|0:91:18       0|0:50:16       1|0:100:27
+16     62386031        .       A       G       .       PASS    AA=A;DP=120     GT:GQ:DP        1|0:91:19       0|0:74:24       1|0:100:79
+8      1254511 rs11782963      C       G       .       PASS    AA=C;DP=107     GT:GQ:DP        1|0:91:20       0|0:38:12       1|0:100:77
+4      19745352        .       C       T       .       PASS    AA=T;DP=103     GT:GQ:DP        1|0:91:20       0|0:65:21       1|0:100:64
+11     55117298        .       G       A       .       PASS    AA=G;DP=89      GT:GQ:DP        1|0:91:21       0|0:50:16       1|0:100:51
+5      50103618        .       C       T       .       PASS    AA=C;DP=130     GT:GQ:DP        1|0:91:21       0|0:68:22       1|0:100:26
+18     45543140        rs12966129      T       G       .       PASS    AA=T;DP=95      GT:GQ:DP        1|0:91:22       0|0:29:10       1|0:100:56
+19     41584905        .       T       C       .       PASS    AA=T;DP=106     GT:GQ:DP        1|0:91:22       0|0:71:23       1|0:100:60
+6      94674501        rs11964567      T       C       .       PASS    AA=T;DP=100     GT:GQ:DP        1|0:91:23       0|0:59:20       1|0:100:57
+18     17355575        rs59433057      C       G       .       PASS    AA=C;DP=98      GT:GQ:DP        1|0:91:23       1|0:100:16      1|1:100:60
+4      41383733        .       T       C       .       PASS    AA=T;DP=112     GT:GQ:DP        1|0:91:23       1|0:100:19      1|1:100:72
+18     9955179 rs29063 A       G       .       PASS    AA=a;DP=118     GT:GQ:DP        1|0:91:23       1|1:66:23       1|1:100:74
+13     28241995        rs8001722       T       C       .       PASS    AA=T;DP=111     GT:GQ:DP        1|0:91:24       0|0:44:29       1|0:100:55
+2      235117052       .       G       C       .       PASS    AA=C;DP=139     GT:GQ:DP        1|0:91:24       0|0:62:22       1|0:100:47
+10     129151550       .       G       A       .       PASS    AA=G;DP=109     GT:GQ:DP        1|0:91:25       0|0:47:15       1|0:100:73
+20     15977913        .       T       C       .       PASS    AA=T;DP=106     GT:GQ:DP        1|0:91:25       0|0:62:21       1|0:100:60
+6      157455786       rs6910483       A       G       .       PASS    AA=A;DP=120     GT:GQ:DP        1|0:91:26       0|0:56:19       1|0:100:77
+13     95073785        rs8000598       G       A       .       PASS    AA=A;DP=146     GT:GQ:DP        1|0:91:26       0|0:86:29       1|0:100:89
+5      111204301       rs4596433       A       G       .       PASS    AA=A;DP=113     GT:GQ:DP        1|0:91:26       1|1:66:22       1|1:100:67
+6      143754258       .       C       A       .       PASS    AA=c;DP=131     GT:GQ:DP        1|0:91:27       0|0:50:22       1|0:100:41
+5      25217039        .       C       G       .       PASS    AA=C;DP=103     GT:GQ:DP        1|0:91:27       0|0:59:19       1|0:100:49
+6      88950671        rs4707440       A       G       .       PASS    AA=A;DP=137     GT:GQ:DP        1|0:91:27       0|0:77:26       1|0:100:85
+1      240419957       .       G       A       .       PASS    AA=g;DP=100     GT:GQ:DP        1|0:91:27       1|0:51:16       1|1:100:59
+12     65075663        .       C       T       .       PASS    AA=C;DP=102     GT:GQ:DP        1|0:91:28       0|0:47:15       1|0:100:60
+6      29842163        rs1737051       A       G       .       PASS    AA=.;DP=130     GT:GQ:DP        1|0:91:28       1|0:100:24      1|1:100:79
+6      8817101 rs4960467       A       T       .       PASS    AA=T;DP=104     GT:GQ:DP        1|0:91:28       1|1:57:19       1|1:100:58
+6      13098416        rs59401141      C       T       .       PASS    AA=C;DP=98      GT:GQ:DP        1|0:91:30       0|0:44:16       1|0:100:51
+5      135005732       rs11738809      G       A       .       PASS    AA=A;DP=118     GT:GQ:DP        1|0:91:32       1|1:87:29       1|1:100:56
+22     28562024        .       G       A       .       PASS    AA=G;DP=96      GT:GQ:DP        1|0:91:38       0|0:59:20       1|0:100:40
+4      29120885        .       T       G       .       PASS    AA=T;DP=66      GT:GQ:DP        1|0:92:11       1|0:100:18      1|1:48:28
+4      71264657        rs1842472       G       T       .       PASS    AA=T;DP=120     GT:GQ:DP        1|0:92:14       1|1:49:23       1|1:100:39
+1      30422816        .       G       A       .       PASS    AA=A;DP=80      GT:GQ:DP        1|0:92:16       0|0:16:10       1|0:100:57
+12     74130440        rs7296131       T       G       .       PASS    AA=T;DP=103     GT:GQ:DP        1|0:92:17       0|0:50:16       1|0:100:59
+3      44325398        rs2129959       A       G       .       PASS    AA=A;DP=68      GT:GQ:DP        1|0:92:17       1|1:33:11       1|1:84:40
+13     79121672        rs9574452       C       G       .       PASS    AA=G;DP=74      GT:GQ:DP        1|0:92:17       1|1:42:14       1|1:96:32
+6      82591220        rs1931624       A       G       .       PASS    AA=G;DP=81      GT:GQ:DP        1|0:92:18       1|0:100:20      1|1:93:32
+15     57726100        rs11637359      C       A       .       PASS    AA=C;DP=101     GT:GQ:DP        1|0:92:18       1|0:100:28      1|1:91:55
+12     10656576        .       C       G       .       PASS    AA=C;DP=90      GT:GQ:DP        1|0:92:19       0|0:62:21       1|0:100:50
+12     9796743 rs7484445       T       C       .       PASS    AA=N;DP=73      GT:GQ:DP        1|0:92:20       0|0:29:10       1|0:100:30
+10     15678757        rs1057969       G       A       .       PASS    AA=G;DP=87      GT:GQ:DP        1|0:92:21       0|0:44:14       1|0:100:51
+4      118079346       rs10010559      C       T       .       PASS    AA=-;DP=75      GT:GQ:DP        1|0:92:21       1|1:8:11        1|1:70:37
+2      236087857       .       C       A       .       PASS    AA=C;DP=95      GT:GQ:DP        1|0:92:23       0|0:11:13       1|0:100:59
+6      166342821       rs300144        T       G       .       PASS    AA=T;DP=110     GT:GQ:DP        1|0:92:23       1|1:30:10       1|1:100:78
+12     113847435       .       A       G       .       PASS    AA=A;DP=100     GT:GQ:DP        1|0:92:24       0|0:41:16       1|0:100:61
+1      175154936       rs972632        C       G       .       PASS    AA=G;DP=96;HM2  GT:GQ:DP        1|0:92:24       1|1:42:15       1|1:100:55
+5      91173597        .       C       T       .       PASS    AA=C;DP=117     GT:GQ:DP        1|0:92:25       0|0:74:26       1|0:100:66
+11     81997942        rs7937297       T       A       .       PASS    AA=T;DP=121     GT:GQ:DP        1|0:92:25       0|0:80:27       1|0:100:73
+10     10190576        rs61837793      T       G       .       PASS    AA=T;DP=71      GT:GQ:DP        1|0:92:25       1|0:69:21       1|1:51:20
+3      58470779        rs4681861       A       T       .       PASS    AA=T;DP=131     GT:GQ:DP        1|0:92:26       0|0:53:17       1|0:100:42
+8      98589035        .       T       C       .       PASS    AA=T;DP=131     GT:GQ:DP        1|0:92:26       0|0:58:33       1|0:100:70
+3      113877219       .       T       C       .       PASS    AA=t;DP=123     GT:GQ:DP        1|0:92:26       0|0:65:23       1|0:100:76
+7      145645461       rs4141649       G       C       .       PASS    AA=G;DP=104     GT:GQ:DP        1|0:92:27       0|0:35:18       1|0:100:61
+1      208070998       .       T       C       .       PASS    AA=T;DP=137     GT:GQ:DP        1|0:92:27       0|0:89:29       1|0:100:82
+3      38364135        rs2844432       G       C       .       PASS    AA=C;DP=86      GT:GQ:DP        1|0:92:27       1|1:27:15       1|1:37:44
+4      188294521       rs6856372       G       A       .       PASS    AA=G;DP=116     GT:GQ:DP        1|0:92:28       0|0:46:22       1|0:100:68
+6      13878004        rs4989640       G       C       .       PASS    AA=G;DP=67      GT:GQ:DP        1|0:92:28       1|0:10:8        1|1:70:28
+20     12803523        rs6074511       T       C       .       PASS    AA=T;DP=102     GT:GQ:DP        1|0:92:28       1|0:74:16       1|1:100:58
+5      68134825        rs58981950      C       G       .       PASS    AA=C;DP=132     GT:GQ:DP        1|0:92:29       0|0:54:23       1|0:100:80
+18     5201476 rs8092261       C       T       .       PASS    AA=C;DP=128     GT:GQ:DP        1|0:92:29       0|0:68:23       1|0:100:36
+19     34232934        rs8182606       C       T       .       PASS    AA=C;DP=104     GT:GQ:DP        1|0:92:30       0|0:50:19       1|0:100:55
+17     21399836        rs58865205      A       G       .       PASS    AA=.;DP=110     GT:GQ:DP        1|0:92:30       0|0:80:26       1|0:100:41
+1      176342707       .       C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        1|0:92:31       0|0:50:19       1|0:100:62
+10     97563395        rs60144080      G       A       .       PASS    AA=G;DP=96      GT:GQ:DP        1|0:92:31       0|0:53:17       1|0:100:48
+15     38492644        .       C       T       .       PASS    AA=C;DP=129     GT:GQ:DP        1|0:92:33       0|0:66:24       1|0:100:72
+4      171965176       rs56965864      G       C       .       PASS    AA=G;DP=150     GT:GQ:DP        1|0:92:35       0|0:83:28       1|0:100:82
+21     15022622        rs8128783       C       G       .       PASS    AA=C;DP=83      GT:GQ:DP        1|0:93:13       0|0:62:20       1|0:100:52
+13     18809651        rs1856013       A       G       .       PASS    AA=A;DP=94      GT:GQ:DP        1|0:93:15       0|0:68:24       1|0:100:53
+10     110830228       rs11194382      A       T       .       PASS    AA=T;DP=103     GT:GQ:DP        1|0:93:16       0|0:63:27       1|0:100:59
+18     39589961        rs1158718       A       G       .       PASS    AA=.;DP=84      GT:GQ:DP        1|0:93:16       1|0:100:17      1|1:100:46
+16     7774786 rs59345108      C       A       .       PASS    AA=C;DP=101     GT:GQ:DP        1|0:93:18       0|0:50:17       1|0:100:66
+13     110644629       rs7327991       T       G       .       PASS    AA=G;DP=120     GT:GQ:DP        1|0:93:18       0|0:71:25       1|0:100:75
+7      78767703        rs2178169       G       T       .       PASS    AA=G;DP=102     GT:GQ:DP        1|0:93:19       1|1:30:21       1|1:100:62
+8      18904264        .       G       A       .       PASS    AA=G;DP=115     GT:GQ:DP        1|0:93:21       0|0:59:20       1|0:100:62
+21     23021179        .       A       G       .       PASS    AA=A;DP=109     GT:GQ:DP        1|0:93:21       1|0:100:26      1|1:100:63
+13     110958636       .       G       A       .       PASS    AA=G;DP=79      GT:GQ:DP        1|0:93:22       0|0:41:15       1|0:100:36
+6      48958328        .       A       G       .       PASS    AA=A;DP=109     GT:GQ:DP        1|0:93:22       0|0:56:20       1|0:100:69
+1      2907901 .       C       T       .       PASS    AA=C;DP=92      GT:GQ:DP        1|0:93:23       0|0:50:16       1|0:100:40
+4      157660746       rs56833685      G       A       .       PASS    AA=G;DP=131     GT:GQ:DP        1|0:93:23       0|0:52:23       1|0:100:86
+2      54542184        rs13034739      C       T       .       PASS    AA=T;DP=128     GT:GQ:DP        1|0:93:23       0|0:92:30       1|0:100:77
+14     65701496        rs57740945      T       C       .       PASS    AA=T;DP=82      GT:GQ:DP        1|0:93:23       1|1:57:20       1|1:79:38
+1      196369712       .       G       A       .       PASS    AA=G;DP=111     GT:GQ:DP        1|0:93:24       0|0:54:23       1|0:100:64
+3      74465912        rs503058        C       T       .       PASS    AA=T;DP=141     GT:GQ:DP        1|0:93:25       0|0:65:22       1|0:100:95
+6      7429593 rs4960326       G       A       .       PASS    AA=G;DP=94      GT:GQ:DP        1|0:93:25       0|0:68:22       1|0:100:35
+22     44653516        .       G       A       .       PASS    AA=A;DP=73      GT:GQ:DP        1|0:93:26       0|0:26:9        1|0:100:29
+7      104856508       rs55993604      A       G       .       PASS    AA=G;DP=105     GT:GQ:DP        1|0:93:26       1|0:100:16      1|1:100:48
+2      121685938       rs9653393       C       A       .       PASS    AA=C;DP=98      GT:GQ:DP        1|0:93:26       1|0:100:20      1|1:82:40
+4      35031625        rs13115721      T       C       .       PASS    AA=T;DP=106     GT:GQ:DP        1|0:93:26       1|1:72:25       1|1:99:45
+5      159363020       .       C       A       .       PASS    AA=A;DP=93      GT:GQ:DP        1|0:93:27       0|0:43:25       1|0:100:42
+8      70992476        .       C       G       .       PASS    AA=c;DP=80      GT:GQ:DP        1|0:93:27       0|0:56:18       1|0:91:27
+8      23466266        .       C       T       .       PASS    AA=C;DP=105     GT:GQ:DP        1|0:93:28       0|0:26:8        1|0:100:69
+12     128442017       rs876499        C       T       .       PASS    AA=C;DP=108     GT:GQ:DP        1|0:93:30       0|0:44:14       1|0:100:63
+10     71639139        rs2244916       T       C       .       PASS    AA=T;DP=148     GT:GQ:DP        1|0:93:30       0|0:74:25       1|0:100:93
+1      172125810       rs1322778       A       G       .       PASS    AA=A;DP=107     GT:GQ:DP        1|0:93:30       1|0:100:22      1|1:15:54
+2      235408905       .       G       A       .       PASS    AA=G;DP=126     GT:GQ:DP        1|0:93:32       0|0:68:23       1|0:100:31
+19     6319920 .       C       T       .       PASS    AA=C;DP=134     GT:GQ:DP        1|0:93:35       0|0:24:18       1|0:100:81
+18     66930367        .       A       G       .       PASS    AA=G;DP=62      GT:GQ:DP        1|0:94:11       0|0:32:10       1|0:100:34
+5      81387199        rs7733122       C       T       .       PASS    AA=C;DP=102     GT:GQ:DP        1|0:94:13       0|0:74:24       1|0:100:60
+11     79766138        rs1479295       T       C       .       PASS    AA=T;DP=58      GT:GQ:DP        1|0:94:13       1|0:72:19       1|1:60:21
+5      80832948        rs28718252      T       C       .       PASS    AA=T;DP=79      GT:GQ:DP        1|0:94:14       0|0:71:23       1|0:100:44
+3      155252064       rs9818079       A       G       .       PASS    AA=A;DP=73      GT:GQ:DP        1|0:94:14       1|0:100:13      1|1:100:45
+1      72369096        rs2630408       T       C       .       PASS    AA=T;DP=87      GT:GQ:DP        1|0:94:14       1|0:75:22       1|1:78:38
+6      123541612       rs13196022      G       A       .       PASS    AA=A;DP=98      GT:GQ:DP        1|0:94:14       1|0:86:20       1|1:100:65
+13     43346522        rs9533668       T       C       .       PASS    AA=T;DP=74      GT:GQ:DP        1|0:94:14       1|0:99:20       1|1:35:40
+6      83883973        .       G       T       .       PASS    AA=G;DP=82      GT:GQ:DP        1|0:94:17       0|0:30:24       1|0:100:39
+5      28287980        rs2937404       A       C       .       PASS    AA=C;DP=68      GT:GQ:DP        1|0:94:17       1|0:14:12       1|1:100:38
+2      240535688       rs6758764       C       T       .       PASS    AA=C;DP=67      GT:GQ:DP        1|0:94:17       1|0:42:12       1|1:42:36
+18     71575891        .       G       A       .       PASS    AA=T;DP=79      GT:GQ:DP        1|0:94:18       0|0:50:16       1|0:100:43
+8      13641061        .       A       T       .       PASS    AA=A;DP=82      GT:GQ:DP        1|0:94:18       0|0:53:17       1|0:100:45
+11     81366423        .       G       A       .       PASS    AA=g;DP=105     GT:GQ:DP        1|0:94:18       0|0:80:26       1|0:100:57
+5      152119307       .       C       A       .       PASS    AA=C;DP=100     GT:GQ:DP        1|0:94:19       0|0:38:23       1|0:100:56
+19     22502856        rs10417621      G       T       .       PASS    AA=g;DP=91      GT:GQ:DP        1|0:94:20       1|1:20:16       1|1:91:54
+14     64644144        rs945014        T       G       .       PASS    AA=G;DP=108     GT:GQ:DP        1|0:94:20       1|1:27:20       1|1:100:69
+1      18746071        .       T       C       .       PASS    AA=T;DP=79      GT:GQ:DP        1|0:94:21       0|0:35:11       1|0:100:51
+6      41678793        rs9369297       A       G       .       PASS    AA=A;DP=111     GT:GQ:DP        1|0:94:21       0|0:9:11        1|0:100:77
+20     19397317        rs6046115       G       T       .       PASS    AA=T;DP=118     GT:GQ:DP        1|0:94:21       1|1:30:21       1|1:100:76
+4      108824582       rs10024009      A       C       .       PASS    AA=C;DP=99      GT:GQ:DP        1|0:94:21       1|1:36:23       1|1:24:52
+5      29827373        .       A       G       .       PASS    AA=A;DP=94      GT:GQ:DP        1|0:94:22       0|0:44:14       1|0:100:58
+5      67517543        rs6884145       G       A       .       PASS    AA=G;DP=77      GT:GQ:DP        1|0:94:22       0|0:68:22       1|0:100:23
+13     64783547        rs2116276       G       T       .       PASS    AA=T;DP=114     GT:GQ:DP        1|0:94:22       1|1:33:12       1|1:100:75
+8      65616081        rs7831363       C       A       .       PASS    AA=a;DP=75      GT:GQ:DP        1|0:94:23       1|1:12:18       1|1:32:27
+11     45116610        rs12277773      G       A       .       PASS    AA=G;DP=86      GT:GQ:DP        1|0:94:24       0|0:56:18       1|0:100:32
+12     89559573        rs11105718      A       G       .       PASS    AA=A;DP=94      GT:GQ:DP        1|0:94:24       1|1:60:21       1|1:100:49
+11     43277395        rs61883509      T       C       .       PASS    AA=T;DP=96      GT:GQ:DP        1|0:94:25       0|0:44:14       1|0:100:59
+5      126943614       rs6878919       G       C       .       PASS    AA=C;DP=114     GT:GQ:DP        1|0:94:25       0|0:44:16       1|0:100:72
+17     7613120 rs7219467       G       A       .       PASS    AA=A;DP=97      GT:GQ:DP        1|0:94:25       0|0:47:16       1|0:100:56
+1      2700574 rs55657723      C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        1|0:94:25       0|0:50:18       1|0:100:72
+2      106560653       rs6720834       C       A       .       PASS    AA=.;DP=130     GT:GQ:DP        1|0:94:25       0|0:68:23       1|0:100:80
+18     62917567        .       C       T       .       PASS    AA=C;DP=127     GT:GQ:DP        1|0:94:25       0|0:78:33       1|0:100:71
+16     78202983        rs9921349       C       G       .       PASS    AA=C;DP=121     GT:GQ:DP        1|0:94:25       0|0:89:29       1|0:100:67
+2      197470557       rs16859304      C       T       .       PASS    AA=T;DP=115     GT:GQ:DP        1|0:94:25       1|0:100:25      1|1:100:64
+3      182029598       .       G       A       .       PASS    AA=G;DP=100     GT:GQ:DP        1|0:94:27       0|0:44:14       1|0:100:59
+19     43329883        rs58512019      T       A       .       PASS    AA=T;DP=104     GT:GQ:DP        1|0:94:27       0|0:65:21       1|0:100:55
+18     18810625        rs4335860       G       A       .       PASS    AA=G;DP=107     GT:GQ:DP        1|0:94:27       0|0:77:26       1|0:100:55
+2      229535923       rs7578915       G       C       .       PASS    AA=C;DP=119     GT:GQ:DP        1|0:94:28       1|1:69:24       1|1:100:68
+10     8572572 .       C       G       .       PASS    AA=C;DP=109     GT:GQ:DP        1|0:94:29       0|0:38:12       1|0:100:66
+1      27284577        rs507310        C       G       .       PASS    AA=C;DP=120     GT:GQ:DP        1|0:94:29       1|0:80:15       1|1:100:77
+18     55601757        .       C       T       .       PASS    AA=c;DP=125     GT:GQ:DP        1|0:94:30       0|0:53:19       1|0:100:76
+1      182522929       rs1111087       C       T       .       PASS    AA=C;DP=144;HM2 GT:GQ:DP        1|0:94:35       0|0:98:32       1|0:100:79
+7      82013587        rs17276922      T       A       .       PASS    AA=T;DP=85      GT:GQ:DP        1|0:94:9        0|0:65:22       1|0:100:52
+1      193530080       rs16829697      A       G       .       PASS    AA=A;DP=61;HM2  GT:GQ:DP        1|0:95:11       0|0:35:11       1|0:100:28
+6      119884655       .       G       C       .       PASS    AA=G;DP=113     GT:GQ:DP        1|0:95:13       0|0:62:21       1|0:100:76
+7      155140481       rs11765905      A       T       .       PASS    AA=A;DP=83      GT:GQ:DP        1|0:95:14       0|0:41:13       1|0:100:55
+3      149693314       .       C       T       .       PASS    AA=C;DP=73      GT:GQ:DP        1|0:95:14       0|0:47:15       1|0:100:42
+13     94209310        rs1924075       T       A       .       PASS    AA=A;DP=100     GT:GQ:DP        1|0:95:14       0|0:50:16       1|0:100:71
+8      61743230        rs622755        A       G       .       PASS    AA=G;DP=90      GT:GQ:DP        1|0:95:14       1|1:54:19       1|1:100:59
+3      111208507       .       G       A       .       PASS    AA=G;DP=106     GT:GQ:DP        1|0:95:17       0|0:65:23       1|0:100:68
+6      69077675        .       G       C       .       PASS    AA=G;DP=98      GT:GQ:DP        1|0:95:17       1|1:72:24       1|1:100:57
+4      168957446       rs7671708       T       C       .       PASS    AA=C;DP=109     GT:GQ:DP        1|0:95:17       1|1:75:26       1|1:100:64
+11     83692811        .       A       G       .       PASS    AA=A;DP=98      GT:GQ:DP        1|0:95:18       0|0:44:14       1|0:100:67
+12     7833885 rs12821942      G       A       .       PASS    AA=N;DP=110     GT:GQ:DP        1|0:95:19       0|0:40:24       1|0:100:66
+10     7847619 .       A       G       .       PASS    AA=A;DP=110     GT:GQ:DP        1|0:95:19       0|0:64:29       1|0:100:62
+2      204698037       .       A       G       .       PASS    AA=a;DP=103     GT:GQ:DP        1|0:95:19       0|0:77:28       1|0:100:55
+7      20511814        rs12533552      C       G       .       PASS    AA=G;DP=97      GT:GQ:DP        1|0:95:21       0|0:95:31       1|0:100:35
+16     85525844        rs4843482       A       G       .       PASS    AA=G;DP=89      GT:GQ:DP        1|0:95:21       1|0:59:14       1|1:100:43
+13     55475306        rs11148370      A       G       .       PASS    AA=A;DP=100     GT:GQ:DP        1|0:95:22       0|0:62:20       1|0:100:59
+3      77847123        .       A       G       .       PASS    AA=A;DP=107     GT:GQ:DP        1|0:95:22       0|0:71:23       1|0:100:65
+2      181996981       .       C       T       .       PASS    AA=C;DP=104     GT:GQ:DP        1|0:95:23       0|0:32:25       1|0:100:55
+22     48703573        rs9627797       G       A       .       PASS    AA=g;DP=91      GT:GQ:DP        1|0:95:23       0|0:50:17       1|0:100:42
+1      104418082       rs6698497       G       A       .       PASS    AA=A;DP=73      GT:GQ:DP        1|0:95:23       1|1:24:8        1|1:80:30
+5      10847537        rs2918403       G       T       .       PASS    AA=G;DP=108     GT:GQ:DP        1|0:95:24       0|0:42:20       1|0:100:65
+7      9686132 .       G       A       .       PASS    AA=G;DP=105     GT:GQ:DP        1|0:95:24       0|0:68:22       1|0:100:59
+X      357894  rs5991204       G       T       .       PASS    AA=.;DP=83      GT:GQ:DP        1|0:95:25       0|0:59:19       1|0:100:34
+20     35954983        rs6126457       G       A       .       PASS    AA=g;DP=126     GT:GQ:DP        1|0:95:25       1|0:92:22       1|1:100:75
+12     55548379        .       C       A       .       PASS    AA=c;DP=84      GT:GQ:DP        1|0:95:26       0|0:26:8        1|0:100:52
+7      151141088       rs61231590      C       T       .       PASS    AA=C;DP=88      GT:GQ:DP        1|0:95:26       0|0:35:11       1|0:100:43
+9      99454437        rs7866961       T       C       .       PASS    AA=T;DP=98      GT:GQ:DP        1|0:95:27       1|1:48:16       1|1:100:54
+7      34617970        rs6963063       A       G       .       PASS    AA=A;DP=104     GT:GQ:DP        1|0:95:27       1|1:69:25       1|1:100:49
+22     29066147        rs2074732       G       A       .       PASS    AA=G;DP=136     GT:GQ:DP        1|0:95:28       0|0:53:17       1|0:100:47
+1      164770566       rs10918511      G       A       .       PASS    AA=G;DP=120     GT:GQ:DP        1|0:95:29       0|0:80:28       1|0:100:64
+2      229591646       rs10211464      C       G       .       PASS    AA=G;DP=104     GT:GQ:DP        1|0:95:29       1|1:54:20       1|1:100:44
+11     130933845       rs61901935      C       T       .       PASS    AA=C;DP=158     GT:GQ:DP        1|0:95:31       1|0:100:34      1|1:100:49
+22     23775380        rs57608143      C       G       .       PASS    AA=C;DP=141     GT:GQ:DP        1|0:95:33       0|0:39:21       1|0:100:85
+4      102912986       rs28721993      G       A       .       PASS    AA=G;DP=69      GT:GQ:DP        1|0:96:13       1|1:72:24       1|1:84:28
+8      108806125       rs11993644      C       T       .       PASS    AA=C;DP=86      GT:GQ:DP        1|0:96:16       1|1:42:16       1|1:100:52
+22     49206564        rs7511461       T       C       .       PASS    AA=C;DP=96      GT:GQ:DP        1|0:96:18       1|1:33:12       1|1:100:67
+18     51122144        .       C       A       .       PASS    AA=C;DP=86      GT:GQ:DP        1|0:96:19       0|0:35:11       1|0:100:54
+5      63059661        rs16892204      T       C       .       PASS    AA=T;DP=102     GT:GQ:DP        1|0:96:19       0|0:65:21       1|0:100:62
+22     25957416        rs498789        T       C       .       PASS    AA=C;DP=121     GT:GQ:DP        1|0:96:19       0|0:68:24       1|0:100:84
+21     20763084        rs1735820       A       G       .       PASS    AA=T;DP=71      GT:GQ:DP        1|0:96:19       1|0:96:18       1|1:63:23
+10     16034785        rs59366589      T       C       .       PASS    AA=C;DP=97      GT:GQ:DP        1|0:96:20       0|0:44:14       1|0:100:60
+20     2464397 .       C       T       .       PASS    AA=C;DP=101     GT:GQ:DP        1|0:96:20       0|0:68:23       1|0:100:58
+3      152561860       .       T       C       .       PASS    AA=T;DP=98      GT:GQ:DP        1|0:96:20       0|0:77:25       1|0:100:55
+4      166886640       rs13435621      C       T       .       PASS    AA=C;DP=92      GT:GQ:DP        1|0:96:20       1|0:100:17      1|1:100:41
+5      18378282        rs2650441       T       G       .       PASS    AA=T;DP=106     GT:GQ:DP        1|0:96:20       1|0:100:30      1|1:77:54
+4      43738065        rs13123058      T       C       .       PASS    AA=C;DP=97      GT:GQ:DP        1|0:96:20       1|1:42:15       1|1:100:62
+4      118782117       rs2251269       A       G       .       PASS    AA=G;DP=66      GT:GQ:DP        1|0:96:21       0|0:35:11       1|0:100:34
+3      154200108       rs6798875       C       A       .       PASS    AA=A;DP=92      GT:GQ:DP        1|0:96:21       0|0:49:27       1|0:100:44
+6      14304282        rs56758253      C       A       .       PASS    AA=C;DP=138     GT:GQ:DP        1|0:96:21       0|0:62:21       1|0:100:51
+19     48513056        rs2098021       C       G       .       PASS    AA=G;DP=83      GT:GQ:DP        1|0:96:21       1|0:100:17      1|1:100:39
+7      10465054        rs10243056      C       T       .       PASS    AA=T;DP=107     GT:GQ:DP        1|0:96:21       1|1:60:22       1|1:100:64
+10     110776969       rs7087118       C       A       .       PASS    AA=A;DP=97      GT:GQ:DP        1|0:96:22       0|0:56:32       1|0:100:43
+11     101236749       rs10791533      A       G       .       PASS    AA=G;DP=93      GT:GQ:DP        1|0:96:22       1|0:98:20       1|1:100:47
+20     1180032 rs6040904       T       C       .       PASS    AA=T;DP=77      GT:GQ:DP        1|0:96:22       1|1:21:12       1|1:100:43
+5      38503391        rs62353649      C       T       .       PASS    AA=C;DP=73      GT:GQ:DP        1|0:96:23       0|0:14:4        1|0:100:35
+18     55728763        .       A       C       .       PASS    AA=A;DP=102     GT:GQ:DP        1|0:96:24       0|0:28:14       1|0:100:65
+18     60320737        rs7227186       G       A       .       PASS    AA=A;DP=137     GT:GQ:DP        1|0:96:24       0|0:43:25       1|0:100:40
+6      82540237        .       G       T       .       PASS    AA=G;DP=102     GT:GQ:DP        1|0:96:24       0|0:77:27       1|0:100:51
+8      106716311       rs16873446      G       T       .       PASS    AA=G;DP=134     GT:GQ:DP        1|0:96:24       0|0:86:28       1|0:100:84
+3      114779383       rs9823358       G       C       .       PASS    AA=G;DP=141     GT:GQ:DP        1|0:96:24       0|0:98:32       1|0:100:44
+4      30382672        .       C       A       .       PASS    AA=C;DP=96      GT:GQ:DP        1|0:96:25       0|0:36:22       1|0:100:54
+13     92889114        .       A       G       .       PASS    AA=a;DP=111     GT:GQ:DP        1|0:96:25       0|0:44:14       1|0:100:71
+19     14664191        rs1808415       G       A       .       PASS    AA=A;DP=104     GT:GQ:DP        1|0:96:25       1|1:51:18       1|1:100:68
+12     25667920        rs6416240       A       G       .       PASS    AA=A;DP=114     GT:GQ:DP        1|0:96:25       1|1:62:28       1|1:100:61
+9      89327937        rs10746815      G       A       .       PASS    AA=G;DP=96      GT:GQ:DP        1|0:96:26       1|1:36:12       1|1:100:58
+11     15857104        rs1440706       C       T       .       PASS    AA=T;DP=123     GT:GQ:DP        1|0:96:26       1|1:78:26       1|1:100:72
+10     66657138        rs4481921       A       T       .       PASS    AA=A;DP=135     GT:GQ:DP        1|0:96:27       0|0:100:33      1|0:100:72
+2      69881957        .       A       G       .       PASS    AA=A;DP=103     GT:GQ:DP        1|0:96:27       0|0:13:14       1|0:100:61
+2      34143512        rs6731884       C       A       .       PASS    AA=C;DP=101     GT:GQ:DP        1|0:96:27       0|0:36:15       1|0:100:56
+21     15747410        rs1736156       G       A       .       PASS    AA=G;DP=98      GT:GQ:DP        1|0:96:27       1|0:100:27      1|1:100:44
+17     45461295        rs7224123       C       T       .       PASS    AA=C;DP=111     GT:GQ:DP        1|0:96:29       0|0:41:13       1|0:100:51
+4      111386297       rs6533505       T       G       .       PASS    AA=G;DP=114     GT:GQ:DP        1|0:96:29       1|0:100:16      1|1:100:73
+3      7237487 rs9860446       T       A       .       PASS    AA=A;DP=96      GT:GQ:DP        1|0:96:29       1|0:90:21       1|1:100:39
+15     52500909        rs11855193      G       C       .       PASS    AA=G;DP=136     GT:GQ:DP        1|0:96:30       0|0:80:27       1|0:100:78
+4      110227498       rs6851437       G       T       .       PASS    AA=g;DP=141     GT:GQ:DP        1|0:96:31       0|0:80:32       1|0:100:75
+1      243584574       rs1076055       G       A       .       PASS    AA=G;DP=109;HM2 GT:GQ:DP        1|0:96:32       0|0:47:18       1|0:100:58
+12     104159406       rs1196789       A       G       .       PASS    AA=G;DP=124     GT:GQ:DP        1|0:96:36       1|1:51:19       1|1:100:68
+1      221924325       .       C       T       .       PASS    AA=c;DP=133     GT:GQ:DP        1|0:96:37       0|0:77:27       1|0:100:27
+11     123123687       rs10893085      C       T       .       PASS    AA=T;DP=160     GT:GQ:DP        1|0:96:38       0|0:92:30       1|0:100:50
+16     72248043        rs11646591      T       C       .       PASS    AA=T;DP=84      GT:GQ:DP        1|0:97:11       1|0:100:15      1|1:100:55
+6      112356438       .       T       C       .       PASS    AA=T;DP=67      GT:GQ:DP        1|0:97:14       0|0:41:13       1|0:100:32
+13     88547713        .       A       T       .       PASS    AA=A;DP=58      GT:GQ:DP        1|0:97:15       1|0:100:17      1|1:60:21
+1      231275405       .       A       T       .       PASS    AA=A;DP=66      GT:GQ:DP        1|0:97:16       0|0:20:16       1|0:100:29
+9      131682416       rs10118181      T       A       .       PASS    AA=T;DP=100     GT:GQ:DP        1|0:97:17       0|0:29:9        1|0:100:65
+11     12312512        .       G       C       .       PASS    AA=G;DP=91      GT:GQ:DP        1|0:97:17       0|0:41:13       1|0:100:58
+3      171326118       rs61031563      C       T       .       PASS    AA=C;DP=94      GT:GQ:DP        1|0:97:17       0|0:77:25       1|0:100:51
+11     23175649        rs1482710       G       A       .       PASS    AA=g;DP=96      GT:GQ:DP        1|0:97:17       1|0:100:23      1|1:100:56
+18     4168812 rs1521434       C       T       .       PASS    AA=T;DP=74      GT:GQ:DP        1|0:97:17       1|1:42:14       1|1:92:43
+11     41915611        .       G       A       .       PASS    AA=G;DP=124     GT:GQ:DP        1|0:97:19       0|0:100:38      1|0:100:66
+2      234470434       rs28901577      C       T       .       PASS    AA=c;DP=67      GT:GQ:DP        1|0:97:19       0|0:44:14       1|0:100:33
+1      172417998       .       A       G       .       PASS    AA=A;DP=106     GT:GQ:DP        1|0:97:19       1|0:100:27      1|1:100:63
+19     23750290        .       A       G       .       PASS    AA=A;DP=118     GT:GQ:DP        1|0:97:20       0|0:74:25       1|0:100:73
+6      5768331 rs11961267      G       A       .       PASS    AA=G;DP=110     GT:GQ:DP        1|0:97:20       1|1:30:18       1|1:100:74
+8      61217672        rs12547404      G       A       .       PASS    AA=A;DP=98      GT:GQ:DP        1|0:97:20       1|1:84:28       1|1:100:50
+2      35759581        rs1401226       G       T       .       PASS    AA=G;DP=116     GT:GQ:DP        1|0:97:21       0|0:65:21       1|0:100:77
+10     21523794        .       G       A       .       PASS    AA=G;DP=118     GT:GQ:DP        1|0:97:22       0|0:59:20       1|0:100:63
+19     45245628        .       G       A       .       PASS    AA=G;DP=98      GT:GQ:DP        1|0:97:22       0|0:74:25       1|0:100:48
+19     49002360        rs12462476      A       C       .       PASS    AA=a;DP=113     GT:GQ:DP        1|0:97:22       0|0:80:26       1|0:100:68
+3      133717737       rs3762676       A       G       .       PASS    AA=A;DP=126     GT:GQ:DP        1|0:97:22       1|1:90:31       1|1:100:73
+3      31861238        .       C       T       .       PASS    AA=C;DP=130     GT:GQ:DP        1|0:97:23       0|0:71:25       1|0:100:83
+6      13426307        rs34307819      A       G       .       PASS    AA=G;DP=94      GT:GQ:DP        1|0:97:23       1|0:12:18       1|1:100:53
+6      155948300       rs60360539      T       C       .       PASS    AA=t;DP=101     GT:GQ:DP        1|0:97:24       0|0:53:17       1|0:100:59
+9      98829972        rs7041003       T       A       .       PASS    AA=a;DP=63      GT:GQ:DP        1|0:97:24       1|0:19:8        1|1:46:23
+1      65979641        rs4614233       T       C       .       PASS    AA=t;DP=84      GT:GQ:DP        1|0:97:24       1|1:19:17       1|1:49:34
+2      140996549       rs2890534       C       A       .       PASS    AA=C;DP=82      GT:GQ:DP        1|0:97:24       1|1:39:13       1|1:100:47
+2      180188622       rs3106708       C       T       .       PASS    AA=T;DP=98      GT:GQ:DP        1|0:97:24       1|1:60:20       1|1:100:54
+10     128986846       rs12767483      G       A       .       PASS    AA=G;DP=96      GT:GQ:DP        1|0:97:25       0|0:65:23       1|0:100:47
+17     10779513        .       G       A       .       PASS    AA=G;DP=115     GT:GQ:DP        1|0:97:25       0|0:71:24       1|0:100:65
+10     92201057        rs1773394       T       A       .       PASS    AA=A;DP=121     GT:GQ:DP        1|0:97:25       1|0:100:34      1|1:100:60
+15     44273683        rs8028983       A       G       .       PASS    AA=G;DP=120     GT:GQ:DP        1|0:97:26       0|0:51:27       1|0:100:65
+8      10641203        rs6601517       T       C       .       PASS    AA=t;DP=96      GT:GQ:DP        1|0:97:26       1|0:100:18      1|1:100:52
+12     19829449        rs9706299       C       T       .       PASS    AA=T;DP=116     GT:GQ:DP        1|0:97:26       1|0:100:25      1|1:100:65
+12     122889433       rs1922256       G       T       .       PASS    AA=T;DP=93      GT:GQ:DP        1|0:97:27       0|0:24:18       1|0:100:38
+2      174896349       .       G       A       .       PASS    AA=G;DP=82      GT:GQ:DP        1|0:97:27       0|0:38:12       1|0:100:33
+6      2307069 rs12191002      A       G       .       PASS    AA=G;DP=152     GT:GQ:DP        1|0:97:27       0|0:57:24       1|0:100:55
+8      121843007       rs4342647       C       T       .       PASS    AA=C;DP=99      GT:GQ:DP        1|0:97:27       0|0:71:23       1|0:100:47
+6      128898338       rs6569531       T       C       .       PASS    AA=T;DP=129     GT:GQ:DP        1|0:97:27       1|0:100:30      1|1:100:71
+16     49377411        rs2111435       C       T       .       PASS    AA=N;DP=103     GT:GQ:DP        1|0:97:27       1|1:51:17       1|1:100:60
+20     2384700 .       C       A       .       PASS    AA=C;DP=116     GT:GQ:DP        1|0:97:28       0|0:57:30       1|0:100:56
+2      107564749       rs11885298      C       T       .       PASS    AA=C;DP=121     GT:GQ:DP        1|0:97:28       1|0:90:27       1|1:100:67
+1      94144597        rs718874        C       A       .       PASS    AA=C;DP=85      GT:GQ:DP        1|0:97:28       1|1:21:13       1|1:99:45
+17     72763116        .       C       T       .       PASS    AA=c;DP=106     GT:GQ:DP        1|0:97:29       0|0:38:13       1|0:100:54
+2      238773935       rs35673727      T       C       .       PASS    AA=T;DP=111     GT:GQ:DP        1|0:97:29       0|0:71:23       1|0:100:47
+17     21318809        rs9889782       G       A       .       PASS    AA=A;DP=127     GT:GQ:DP        1|0:97:29       1|1:32:18       1|1:100:82
+19     7131863 rs7257866       C       T       .       PASS    AA=T;DP=106     GT:GQ:DP        1|0:97:29       1|1:72:24       1|1:95:54
+11     45379507        rs61173754      G       A       .       PASS    AA=G;DP=118     GT:GQ:DP        1|0:97:30       0|0:9:14        1|0:100:69
+2      239359097       .       C       T       .       PASS    AA=c;DP=115     GT:GQ:DP        1|0:97:33       0|0:20:14       1|0:100:66
+16     12509749        rs6498312       C       G       .       PASS    AA=G;DP=143     GT:GQ:DP        1|0:97:34       1|0:100:24      1|1:100:83
+13     65369446        .       T       A       .       PASS    AA=T;DP=86      GT:GQ:DP        1|0:98:10       0|0:74:24       1|0:100:48
+3      177507039       rs1564725       A       T       .       PASS    AA=T;DP=75      GT:GQ:DP        1|0:98:12       1|0:95:15       1|1:95:47
+3      87237351        .       G       A       .       PASS    AA=A;DP=105     GT:GQ:DP        1|0:98:13       0|0:53:17       1|0:100:34
+9      105618873       rs10990949      C       T       .       PASS    AA=T;DP=90      GT:GQ:DP        1|0:98:13       0|0:71:24       1|0:100:54
+2      163829695       rs10196790      T       C       .       PASS    AA=T;DP=59      GT:GQ:DP        1|0:98:14       0|0:29:9        1|0:100:26
+2      49671783        .       G       C       .       PASS    AA=G;DP=58      GT:GQ:DP        1|0:98:14       0|0:65:22       1|0:100:17
+4      86249139        rs4455405       C       T       .       PASS    AA=C;DP=104     GT:GQ:DP        1|0:98:15       0|0:68:23       1|0:100:66
+9      20478384        rs6475443       T       C       .       PASS    AA=T;DP=83      GT:GQ:DP        1|0:98:15       1|0:100:15      1|1:98:50
+13     51567131        rs7981904       C       T       .       PASS    AA=T;DP=90      GT:GQ:DP        1|0:98:16       0|0:47:15       1|0:100:59
+2      104648943       .       C       T       .       PASS    AA=C;DP=85      GT:GQ:DP        1|0:98:16       0|0:68:23       1|0:100:38
+4      32833707        rs61111795      G       A       .       PASS    AA=A;DP=89      GT:GQ:DP        1|0:98:17       0|0:47:15       1|0:100:56
+3      105791501       rs7614159       G       A       .       PASS    AA=A;DP=69      GT:GQ:DP        1|0:98:17       1|1:36:12       1|1:100:41
+6      86048184        rs527884        C       T       .       PASS    AA=T;DP=72      GT:GQ:DP        1|0:98:17       1|1:51:17       1|1:75:25
+13     106328385       rs1485627       T       C       .       PASS    AA=T;DP=104     GT:GQ:DP        1|0:98:17       1|1:75:26       1|1:100:61
+22     43955065        rs2238801       C       T       .       PASS    AA=C;DP=89      GT:GQ:DP        1|0:98:18       0|0:59:20       1|0:100:50
+6      17468555        rs3929907       T       C       .       PASS    AA=T;DP=86      GT:GQ:DP        1|0:98:18       0|0:62:20       1|0:100:37
+5      101097380       .       C       A       .       PASS    AA=C;DP=92      GT:GQ:DP        1|0:98:19       0|0:38:13       1|0:100:59
+7      79289906        rs1293115       A       G       .       PASS    AA=G;DP=83      GT:GQ:DP        1|0:98:19       0|0:62:20       1|0:100:32
+4      167536134       rs10002876      G       A       .       PASS    AA=G;DP=109     GT:GQ:DP        1|0:98:19       0|0:80:28       1|0:100:59
+13     113847853       rs9525367       C       T       .       PASS    AA=c;DP=101     GT:GQ:DP        1|0:98:20       1|0:28:17       1|1:100:64
+4      111122461       rs11569019      C       G       .       PASS    AA=C;DP=83      GT:GQ:DP        1|0:98:21       0|0:32:11       1|0:100:51
+16     74861696        rs58296591      A       G       .       PASS    AA=G;DP=81      GT:GQ:DP        1|0:98:21       0|0:34:19       1|0:100:41
+2      143800113       rs6738501       G       T       .       PASS    AA=G;DP=83      GT:GQ:DP        1|0:98:21       0|0:35:22       1|0:100:28
+2      105533285       rs12466232      C       T       .       PASS    AA=C;DP=83      GT:GQ:DP        1|0:98:21       0|0:59:20       1|0:100:41
+7      118183102       rs1403867       A       C       .       PASS    AA=A;DP=88      GT:GQ:DP        1|0:98:21       0|0:59:20       1|0:100:46
+8      145075327       .       G       A       .       PASS    AA=G;DP=74      GT:GQ:DP        1|0:98:21       0|0:8:9 1|0:100:35
+2      240838881       rs4314022       C       G       .       PASS    AA=G;DP=104     GT:GQ:DP        1|0:98:21       1|1:54:19       1|1:100:62
+18     70125889        .       G       A       .       PASS    AA=G;DP=81      GT:GQ:DP        1|0:98:22       0|0:57:24       1|0:100:28
+10     9883026 rs1926216       G       A       .       PASS    AA=G;DP=120     GT:GQ:DP        1|0:98:22       0|0:62:23       1|0:100:63
+4      18428461        .       A       G       .       PASS    AA=A;DP=86      GT:GQ:DP        1|0:98:23       0|0:13:9        1|0:100:50
+5      87174830        rs16902841      G       C       .       PASS    AA=G;DP=140     GT:GQ:DP        1|0:98:23       0|0:86:30       1|0:100:86
+11     87710211        rs580808        C       T       .       PASS    AA=C;DP=102     GT:GQ:DP        1|0:98:23       1|1:45:15       1|1:100:65
+16     1195696 rs8048138       C       T       .       PASS    AA=C;DP=103     GT:GQ:DP        1|0:98:24       0|0:34:16       1|0:100:63
+2      5891365 rs2564000       G       A       .       PASS    AA=A;DP=96      GT:GQ:DP        1|0:98:24       0|0:59:19       1|0:100:48
+13     68655746        rs2325197       C       G       .       PASS    AA=C;DP=116     GT:GQ:DP        1|0:98:24       1|0:100:26      1|1:100:68
+5      174875870       rs283013        T       C       .       PASS    AA=T;DP=119     GT:GQ:DP        1|0:98:25       0|0:23:16       1|0:100:76
+5      82490314        rs16900201      A       G       .       PASS    AA=A;DP=99      GT:GQ:DP        1|0:98:25       0|0:44:14       1|0:100:60
+5      139377182       rs265142        C       T       .       PASS    AA=N;DP=111     GT:GQ:DP        1|0:98:26       0|0:43:25       1|0:100:50
+6      47298098        rs6926764       C       G       .       PASS    AA=C;DP=122     GT:GQ:DP        1|0:98:26       0|0:44:14       1|0:100:80
+7      141266339       .       T       C       .       PASS    AA=t;DP=102     GT:GQ:DP        1|0:98:26       0|0:62:20       1|0:100:53
+2      36017568        rs1404050       T       C       .       PASS    AA=C;DP=95      GT:GQ:DP        1|0:98:26       1|0:100:18      1|1:85:50
+14     77991106        rs2110420       A       G       .       PASS    AA=G;DP=139     GT:GQ:DP        1|0:98:26       1|0:100:22      1|1:100:93
+10     107432346       rs11192555      C       T       .       PASS    AA=C;DP=145     GT:GQ:DP        1|0:98:26       1|0:100:33      1|1:100:78
+18     7849757 rs16952588      A       G       .       PASS    AA=A;DP=122     GT:GQ:DP        1|0:98:26       1|0:91:21       1|1:100:71
+3      73701269        rs59217439      C       T       .       PASS    AA=C;DP=137     GT:GQ:DP        1|0:98:26       1|1:69:23       1|1:100:85
+16     4481832 rs12443748      C       T       .       PASS    AA=C;DP=136     GT:GQ:DP        1|0:98:27       0|0:41:22       1|0:100:88
+19     3077332 rs1688123       A       G       .       PASS    AA=a;DP=88      GT:GQ:DP        1|0:98:28       1|0:48:13       1|1:100:36
+2      44584367        rs698830        G       C       .       PASS    AA=C;DP=119     GT:GQ:DP        1|0:98:28       1|1:60:21       1|1:100:67
+1      2195624 rs57755752      G       A       .       PASS    AA=G;DP=107     GT:GQ:DP        1|0:98:29       0|0:41:13       1|0:100:67
+15     58371190        .       T       C       .       PASS    AA=t;DP=121     GT:GQ:DP        1|0:98:29       1|0:100:31      1|1:100:59
+6      164039238       rs9346971       C       G       .       PASS    AA=G;DP=121     GT:GQ:DP        1|0:98:29       1|0:88:24       1|1:100:69
+11     114541629       rs11215391      A       T       .       PASS    AA=A;DP=93      GT:GQ:DP        1|0:98:30       0|0:56:19       1|0:100:45
+17     22926878        rs2948520       C       T       .       PASS    AA=C;DP=136     GT:GQ:DP        1|0:98:33       0|0:51:23       1|0:100:83
+1      200234861       .       G       A       .       PASS    AA=G;DP=116     GT:GQ:DP        1|0:98:33       0|0:56:19       1|0:100:62
+19     3579645 rs58060612      G       C       .       PASS    AA=G;DP=118     GT:GQ:DP        1|0:98:37       0|0:56:19       1|0:100:61
+9      89149773        rs7039297       C       A       .       PASS    AA=A;DP=136     GT:GQ:DP        1|0:98:40       1|1:18:15       1|1:100:84
+9      73864759        .       C       T       .       PASS    AA=C;DP=67      GT:GQ:DP        1|0:99:10       0|0:47:16       1|0:100:40
+4      61720921        rs1026145       A       T       .       PASS    AA=A;DP=64      GT:GQ:DP        1|0:99:11       0|0:50:17       1|0:63:26
+4      66995881        .       A       G       .       PASS    AA=A;DP=70      GT:GQ:DP        1|0:99:13       0|0:62:20       1|0:100:25
+5      128467284       .       G       T       .       PASS    AA=G;DP=100     GT:GQ:DP        1|0:99:14       0|0:53:17       1|0:100:69
+4      82172163        .       T       C       .       PASS    AA=T;DP=114     GT:GQ:DP        1|0:99:15       0|0:44:14       1|0:100:36
+9      31903668        rs10970596      T       C       .       PASS    AA=T;DP=59      GT:GQ:DP        1|0:99:15       1|0:89:12       1|1:66:23
+4      109963360       .       G       C       .       PASS    AA=G;DP=110     GT:GQ:DP        1|0:99:16       0|0:50:16       1|0:100:79
+12     84470527        rs7485150       G       C       .       PASS    AA=G;DP=108     GT:GQ:DP        1|0:99:16       0|0:89:29       1|0:100:62
+1      187131817       .       T       C       .       PASS    AA=C;DP=84      GT:GQ:DP        1|0:99:17       0|0:41:14       1|0:100:53
+10     120599786       rs4751677       C       G       .       PASS    AA=G;DP=110     GT:GQ:DP        1|0:99:17       0|0:53:20       1|0:100:70
+13     76545090        rs1178627       C       T       .       PASS    AA=T;DP=93      GT:GQ:DP        1|0:99:17       1|0:67:21       1|1:100:52
+4      117521670       rs28396494      C       G       .       PASS    AA=G;DP=93      GT:GQ:DP        1|0:99:17       1|1:66:23       1|1:100:41
+4      189455243       .       C       T       .       PASS    AA=C;DP=99      GT:GQ:DP        1|0:99:18       0|0:57:24       1|0:100:56
+3      3043688 .       G       A       .       PASS    AA=g;DP=80      GT:GQ:DP        1|0:99:18       0|0:59:19       1|0:100:29
+9      25819846        .       C       T       .       PASS    AA=c;DP=71      GT:GQ:DP        1|0:99:19       0|0:35:11       1|0:100:41
+1      45760161        rs17522918      C       A       .       PASS    AA=C;DP=79;HM3  GT:GQ:DP        1|0:99:20       0|0:29:9        1|0:100:50
+3      18604493        rs336617        C       G       .       PASS    AA=C;DP=82      GT:GQ:DP        1|0:99:20       0|0:32:10       1|0:100:53
+4      63839683        rs10001804      A       T       .       PASS    AA=a;DP=105     GT:GQ:DP        1|0:99:20       0|0:80:27       1|0:100:60
+15     35277584        rs10431817      G       A       .       PASS    AA=G;DP=100     GT:GQ:DP        1|0:99:20       1|0:100:20      1|1:100:62
+5      161611516       rs6862075       A       C       .       PASS    AA=C;DP=64      GT:GQ:DP        1|0:99:20       1|1:48:16       1|1:51:17
+19     44687867        rs2304214       C       T       .       PASS    AA=C;DP=87      GT:GQ:DP        1|0:99:21       0|0:38:12       1|0:100:54
+3      30392694        rs9813347       G       C       .       PASS    AA=G;DP=103     GT:GQ:DP        1|0:99:21       0|0:56:18       1|0:100:64
+5      154326977       rs2544883       T       C       .       PASS    AA=T;DP=114     GT:GQ:DP        1|0:99:21       0|0:59:19       1|0:100:32
+3      176022772       .       A       C       .       PASS    AA=A;DP=87      GT:GQ:DP        1|0:99:21       0|0:59:19       1|0:100:48
+9      18115480        rs7864916       A       G       .       PASS    AA=A;DP=100     GT:GQ:DP        1|0:99:21       1|0:100:24      1|1:100:55
+6      89757562        rs12206036      A       G       .       PASS    AA=A;DP=84      GT:GQ:DP        1|0:99:21       1|1:39:14       1|1:78:42
+6      90669224        rs9353704       T       C       .       PASS    AA=C;DP=89      GT:GQ:DP        1|0:99:22       0|0:29:10       1|0:100:57
+10     100206807       rs4598598       C       T       .       PASS    AA=T;DP=101     GT:GQ:DP        1|0:99:22       0|0:50:16       1|0:100:62
+5      100137159       rs276458        C       T       .       PASS    AA=C;DP=96      GT:GQ:DP        1|0:99:22       0|0:56:19       1|0:100:57
+20     59902042        rs1632734       C       G       .       PASS    AA=-;DP=96      GT:GQ:DP        1|0:99:22       1|1:27:20       1|1:100:54
+1      8241529 .       A       G       .       PASS    AA=A;DP=98      GT:GQ:DP        1|0:99:23       0|0:50:17       1|0:100:58
+6      2923214 .       C       G       .       PASS    AA=c;DP=85      GT:GQ:DP        1|0:99:23       0|0:77:25       1|0:100:22
+16     80490686        rs6564932       G       A       .       PASS    AA=g;DP=100     GT:GQ:DP        1|0:99:23       1|1:57:20       1|1:100:55
+1      225897799       rs28446171      G       A       .       PASS    AA=G;DP=110     GT:GQ:DP        1|0:99:24       0|0:47:15       1|0:100:33
+14     53544299        .       G       A       .       PASS    AA=G;DP=133     GT:GQ:DP        1|0:99:24       0|0:58:20       1|0:100:91
+6      99447762        .       G       A       .       PASS    AA=G;DP=125     GT:GQ:DP        1|0:99:24       0|0:71:23       1|0:100:81
+10     111454403       rs11194805      G       C       .       PASS    AA=G;DP=107     GT:GQ:DP        1|0:99:24       0|0:80:26       1|0:100:57
+8      120976364       rs13259990      A       C       .       PASS    AA=A;DP=128     GT:GQ:DP        1|0:99:24       1|0:100:29      1|1:100:75
+6      160018421       .       T       C       .       PASS    AA=T;DP=143     GT:GQ:DP        1|0:99:25       0|0:89:30       1|0:100:42
+6      30780412        rs3132589       C       A       .       PASS    AA=C;DP=128     GT:GQ:DP        1|0:99:25       1|0:33:19       1|1:100:84
+14     100796317       rs1615288       T       C       .       PASS    AA=C;DP=89      GT:GQ:DP        1|0:99:25       1|1:33:12       1|1:100:49
+11     55065957        rs521350        T       G       .       PASS    AA=a;DP=101     GT:GQ:DP        1|0:99:25       1|1:34:14       1|1:100:59
+2      177078853       rs7609112       T       G       .       PASS    AA=G;DP=119     GT:GQ:DP        1|0:99:25       1|1:64:33       1|1:100:61
+16     87756568        .       A       G       .       PASS    AA=A;DP=83      GT:GQ:DP        1|0:99:26       0|0:15:11       1|0:100:42
+10     33463180        .       G       A       .       PASS    AA=G;DP=111     GT:GQ:DP        1|0:99:26       0|0:53:17       1|0:100:62
+15     83156657        .       C       T       .       PASS    AA=C;DP=131     GT:GQ:DP        1|0:99:27       0|0:71:24       1|0:100:39
+1      85561363        .       T       C       .       PASS    AA=T;DP=123     GT:GQ:DP        1|0:99:27       0|0:80:26       1|0:100:56
+2      35906000        rs59524357      G       C       .       PASS    AA=g;DP=109     GT:GQ:DP        1|0:99:28       0|0:43:20       1|0:100:62
+3      190111050       rs6799386       T       C       .       PASS    AA=C;DP=113     GT:GQ:DP        1|0:99:28       1|1:63:21       1|1:100:65
+2      202829380       rs4673237       T       C       .       PASS    AA=T;DP=100     GT:GQ:DP        1|0:99:29       0|0:56:19       1|0:100:41
+17     3343924 rs17222551      C       G       .       PASS    AA=C;DP=118     GT:GQ:DP        1|0:99:30       0|0:50:17       1|0:100:68
+14     51972619        .       G       A       .       PASS    AA=G;DP=142     GT:GQ:DP        1|0:99:31       0|0:44:23       1|0:100:47
+17     13906946        rs11078221      C       T       .       PASS    AA=C;DP=138     GT:GQ:DP        1|0:99:31       1|0:100:21      1|1:100:87
+1      199127626       rs2271019       A       G       .       PASS    AA=A;DP=136;HM2;HM3     GT:GQ:DP        1|0:99:31       1|0:73:13       1|1:100:50
+10     131716136       rs605950        G       A       .       PASS    AA=G;DP=101     GT:GQ:DP        1|0:99:33       0|0:56:18       1|0:100:40
+11     125930396       .       G       A       .       PASS    AA=G;DP=131     GT:GQ:DP        1|0:99:34       0|0:80:27       1|0:100:71
+1      68851216        .       G       A       .       PASS    AA=g;DP=102     GT:GQ:DP        1|0:99:35       0|0:53:18       1|0:100:48
+13     113583316       rs34551980      A       C       .       PASS    AA=a;DP=111     GT:GQ:DP        1|0:99:38       1|1:51:17       1|1:100:49
+1      41849194        rs17363834      C       T       .       PASS    AA=T;DP=116;HM2;HM3     GT:GQ:DP        1|0:99:41       0|0:23:17       1|0:100:58
+7      5272314 rs7782316       C       T       .       PASS    AA=T;DP=150     GT:GQ:DP        1|0:99:41       0|0:47:23       1|0:100:89
+15     32061278        .       C       T       .       PASS    AA=T;DP=84      GT:GQ:DP        1|0:9:15        0|0:65:21       1|0:100:38
+3      22919707        rs9828032       A       G       .       PASS    AA=G;DP=87      GT:GQ:DP        1|0:9:15        1|0:100:26      1|1:90:46
+3      32736485        rs13092303      A       G       .       PASS    AA=G;DP=116     GT:GQ:DP        1|1:100:32      1|1:100:32      1|1:100:31
+2      19945223        rs7590829       A       G       .       PASS    AA=G;DP=134     GT:GQ:DP        1|1:100:32      1|1:100:32      1|1:100:69
+4      190928144       rs7685203       G       A       .       PASS    AA=G;DP=132     GT:GQ:DP        1|1:100:32      1|1:100:33      1|1:100:66
+17     20044352        rs2526484       A       G       .       PASS    AA=G;DP=138     GT:GQ:DP        1|1:100:32      1|1:100:33      1|1:100:76
+4      13308781        rs1388299       C       T       .       PASS    AA=T;DP=123     GT:GQ:DP        1|1:100:32      1|1:100:34      1|1:100:57
+5      68360384        rs4437332       T       C       .       PASS    AA=T;DP=146     GT:GQ:DP        1|1:100:32      1|1:100:34      1|1:100:80
+3      104252863       rs346884        G       C       .       PASS    AA=N;DP=130     GT:GQ:DP        1|1:100:32      1|1:100:35      1|1:100:63
+12     103127721       rs7132418       C       A       .       PASS    AA=A;DP=100     GT:GQ:DP        1|1:100:32      1|1:13:12       1|1:100:54
+13     47556552        rs943067        G       T       .       PASS    AA=T;DP=102     GT:GQ:DP        1|1:100:32      1|1:13:15       1|1:100:55
+21     42447313        rs468730        C       T       .       PASS    AA=T;DP=106     GT:GQ:DP        1|1:100:32      1|1:20:6        1|1:100:67
+19     9860458 rs2336532       T       C       .       PASS    AA=C;DP=96      GT:GQ:DP        1|1:100:32      1|1:26:8        1|1:95:55
+5      110765711       rs306096        G       C       .       PASS    AA=C;DP=141     GT:GQ:DP        1|1:100:32      1|1:27:18       1|1:100:93
+5      164962045       rs10055427      T       G       .       PASS    AA=G;DP=112     GT:GQ:DP        1|1:100:32      1|1:29:14       1|1:100:66
+9      129572809       rs913989        A       C       .       PASS    AA=A;DP=136     GT:GQ:DP        1|1:100:32      1|1:32:18       1|1:100:87
+2      124054907       rs2419987       C       T       .       PASS    AA=T;DP=103     GT:GQ:DP        1|1:100:32      1|1:33:15       1|1:100:53
+12     120382782       rs4980988       C       T       .       PASS    AA=T;DP=95      GT:GQ:DP        1|1:100:32      1|1:35:10       1|1:100:55
+10     98352843        rs2902003       A       C       .       PASS    AA=c;DP=118     GT:GQ:DP        1|1:100:32      1|1:35:21       1|1:100:62
+8      62289075        rs2931336       T       C       .       PASS    AA=T;DP=107     GT:GQ:DP        1|1:100:32      1|1:38:22       1|1:100:44
+16     79865085        rs9937350       C       T       .       PASS    AA=T;DP=107     GT:GQ:DP        1|1:100:32      1|1:40:18       1|1:100:55
+2      107159431       rs10185491      C       T       .       PASS    AA=T;DP=100     GT:GQ:DP        1|1:100:32      1|1:40:22       1|1:100:43
+2      43322249        rs6720087       G       A       .       PASS    AA=A;DP=100     GT:GQ:DP        1|1:100:32      1|1:41:12       1|1:100:55
+4      166519303       rs11940090      G       T       .       PASS    AA=T;DP=113     GT:GQ:DP        1|1:100:32      1|1:41:18       1|1:100:64
+4      41134747        rs11730615      T       G       .       PASS    AA=G;DP=117     GT:GQ:DP        1|1:100:32      1|1:42:26       1|1:100:57
+4      14397100        rs6852380       A       C       .       PASS    AA=A;DP=151     GT:GQ:DP        1|1:100:32      1|1:42:27       1|1:100:89
+9      5951787 rs10758728      C       T       .       PASS    AA=T;DP=84      GT:GQ:DP        1|1:100:32      1|1:44:13       1|1:100:39
+9      138645712       rs944755        A       G       .       PASS    AA=A;DP=132     GT:GQ:DP        1|1:100:32      1|1:45:25       1|1:100:75
+4      8772142 rs6838454       A       G       .       PASS    AA=.;DP=113     GT:GQ:DP        1|1:100:32      1|1:47:14       1|1:100:64
+4      167108961       rs1354306       T       C       .       PASS    AA=C;DP=103     GT:GQ:DP        1|1:100:32      1|1:47:15       1|1:100:54
+11     99574124        rs1939710       A       T       .       PASS    AA=T;DP=124     GT:GQ:DP        1|1:100:32      1|1:47:24       1|1:100:67
+12     74692214        rs10748295      A       G       .       PASS    AA=G;DP=140     GT:GQ:DP        1|1:100:32      1|1:49:27       1|1:100:78
+12     89286107        rs826211        C       G       .       PASS    AA=G;DP=114     GT:GQ:DP        1|1:100:32      1|1:50:15       1|1:100:66
+8      60858095        rs6985444       A       C       .       PASS    AA=t;DP=114     GT:GQ:DP        1|1:100:32      1|1:50:15       1|1:100:69
+1      62512653        rs12127930      A       G       .       PASS    AA=G;DP=114;HM2;HM3     GT:GQ:DP        1|1:100:32      1|1:50:16       1|1:100:66
+6      116635807       rs1204780       T       C       .       PASS    AA=C;DP=130     GT:GQ:DP        1|1:100:32      1|1:50:22       1|1:100:76
+11     102186159       rs470530        A       G       .       PASS    AA=G;DP=119     GT:GQ:DP        1|1:100:32      1|1:52:27       1|1:100:46
+5      112848448       rs171181        G       A       .       PASS    AA=A;DP=115     GT:GQ:DP        1|1:100:32      1|1:53:16       1|1:100:65
+6      148449568       rs1934796       A       G       .       PASS    AA=G;DP=114     GT:GQ:DP        1|1:100:32      1|1:53:16       1|1:100:66
+9      100676161       rs13301974      T       C       .       PASS    AA=C;DP=115     GT:GQ:DP        1|1:100:32      1|1:53:16       1|1:100:67
+10     715744  rs1890678       A       G       .       PASS    AA=G;DP=122     GT:GQ:DP        1|1:100:32      1|1:53:17       1|1:100:69
+5      61675633        rs10461472      A       T       .       PASS    AA=T;DP=117     GT:GQ:DP        1|1:100:32      1|1:53:18       1|1:100:67
+1      239581517       rs6683740       T       G       .       PASS    AA=T;DP=138;HM2 GT:GQ:DP        1|1:100:32      1|1:54:32       1|1:100:74
+13     27850814        rs4769599       A       T       .       PASS    AA=T;DP=111     GT:GQ:DP        1|1:100:32      1|1:55:23       1|1:100:58
+2      44529730        rs1067402       A       G       .       PASS    AA=G;DP=114     GT:GQ:DP        1|1:100:32      1|1:55:26       1|1:100:55
+8      91164649        rs1800645       A       T       .       PASS    AA=T;DP=110     GT:GQ:DP        1|1:100:32      1|1:56:17       1|1:100:62
+11     12216453        rs2706635       C       T       .       PASS    AA=T;DP=118     GT:GQ:DP        1|1:100:32      1|1:56:17       1|1:100:71
+18     59784224        rs2009989       T       C       .       PASS    AA=T;DP=130     GT:GQ:DP        1|1:100:32      1|1:56:19       1|1:100:78
+2      39976291        rs4670982       A       G       .       PASS    AA=G;DP=121     GT:GQ:DP        1|1:100:32      1|1:58:24       1|1:100:64
+15     40760345        rs7169202       G       C       .       PASS    AA=C;DP=124     GT:GQ:DP        1|1:100:32      1|1:58:29       1|1:100:63
+12     60695053        rs1348077       C       T       .       PASS    AA=T;DP=106     GT:GQ:DP        1|1:100:32      1|1:59:18       1|1:100:58
+4      38971948        rs2839765       T       C       .       PASS    AA=C;DP=113     GT:GQ:DP        1|1:100:32      1|1:59:18       1|1:100:63
+8      126921205       rs4006534       A       G       .       PASS    AA=G;DP=110     GT:GQ:DP        1|1:100:32      1|1:59:19       1|1:100:50
+19     57636982        rs1896644       G       A       .       PASS    AA=a;DP=139     GT:GQ:DP        1|1:100:32      1|1:60:30       1|1:100:72
+21     21041761        rs2064044       C       A       .       PASS    AA=C;DP=94      GT:GQ:DP        1|1:100:32      1|1:62:19       1|1:100:31
+5      126487082       rs1003596       A       G       .       PASS    AA=A;DP=106     GT:GQ:DP        1|1:100:32      1|1:62:19       1|1:100:40
+7      138477775       rs7803251       C       A       .       PASS    AA=A;DP=93      GT:GQ:DP        1|1:100:32      1|1:62:19       1|1:100:43
+16     71018965        rs2017748       A       T       .       PASS    AA=A;DP=103     GT:GQ:DP        1|1:100:32      1|1:62:19       1|1:100:52
+12     73381431        rs7314330       A       G       .       PASS    AA=G;DP=126     GT:GQ:DP        1|1:100:32      1|1:62:19       1|1:100:72
+9      6922266 rs946923        C       G       .       PASS    AA=G;DP=143     GT:GQ:DP        1|1:100:32      1|1:62:19       1|1:100:94
+22     22081488        rs5751649       A       G       .       PASS    AA=N;DP=138     GT:GQ:DP        1|1:100:32      1|1:65:20       1|1:100:86
+2      23507196        rs13407828      T       C       .       PASS    AA=C;DP=120     GT:GQ:DP        1|1:100:32      1|1:65:21       1|1:100:69
+5      125302181       rs326027        T       C       .       PASS    AA=C;DP=113     GT:GQ:DP        1|1:100:32      1|1:65:22       1|1:100:58
+1      41546281        rs2363809       A       G       .       PASS    AA=G;DP=151;HM2 GT:GQ:DP        1|1:100:32      1|1:65:23       1|1:100:89
+16     78872268        rs9931303       G       C       .       PASS    AA=C;DP=125     GT:GQ:DP        1|1:100:32      1|1:66:26       1|1:100:65
+6      161185199       .       C       T       .       PASS    AA=t;DP=106     GT:GQ:DP        1|1:100:32      1|1:68:21       1|1:100:47
+22     26231918        rs5762216       A       G       .       PASS    AA=a;DP=113     GT:GQ:DP        1|1:100:32      1|1:68:21       1|1:100:60
+4      114925327       rs10028093      G       A       .       PASS    AA=G;DP=121     GT:GQ:DP        1|1:100:32      1|1:68:21       1|1:100:66
+2      178852274       rs333993        G       A       .       PASS    AA=G;DP=127     GT:GQ:DP        1|1:100:32      1|1:68:21       1|1:100:73
+3      178114548       rs1906660       C       T       .       PASS    AA=T;DP=126     GT:GQ:DP        1|1:100:32      1|1:68:21       1|1:100:74
+2      6982007 rs771286        A       G       .       PASS    AA=G;DP=136     GT:GQ:DP        1|1:100:32      1|1:68:21       1|1:100:84
+6      158646905       rs6919284       C       T       .       PASS    AA=C;DP=111     GT:GQ:DP        1|1:100:32      1|1:68:22       1|1:100:60
+5      53900054        rs2564985       A       C       .       PASS    AA=C;DP=112     GT:GQ:DP        1|1:100:32      1|1:69:24       1|1:100:55
+9      82647427        rs10780465      A       C       .       PASS    AA=C;DP=111     GT:GQ:DP        1|1:100:32      1|1:71:22       1|1:100:50
+2      26931114        rs13029206      G       A       .       PASS    AA=A;DP=113     GT:GQ:DP        1|1:100:32      1|1:71:23       1|1:100:58
+2      120513343       rs7593632       A       G       .       PASS    AA=A;DP=113     GT:GQ:DP        1|1:100:32      1|1:71:23       1|1:100:59
+2      40843402        rs1456586       T       C       .       PASS    AA=N;DP=118     GT:GQ:DP        1|1:100:32      1|1:71:23       1|1:100:63
+14     58141897        rs10782438      T       C       .       PASS    AA=C;DP=134     GT:GQ:DP        1|1:100:32      1|1:71:23       1|1:100:78
+3      133551969       rs7621057       C       G       .       PASS    AA=G;DP=118     GT:GQ:DP        1|1:100:32      1|1:71:24       1|1:100:64
+17     54937010        rs9916000       T       C       .       PASS    AA=C;DP=140     GT:GQ:DP        1|1:100:32      1|1:74:23       1|1:100:45
+20     58153962        rs7274591       G       C       .       PASS    AA=C;DP=112     GT:GQ:DP        1|1:100:32      1|1:74:23       1|1:100:57
+4      126605525       rs1354708       T       C       .       PASS    AA=C;DP=126     GT:GQ:DP        1|1:100:32      1|1:74:23       1|1:100:74
+5      67331169        rs281449        T       C       .       PASS    AA=t;DP=126     GT:GQ:DP        1|1:100:32      1|1:74:25       1|1:100:73
+10     67810026        rs2007116       G       A       .       PASS    AA=G;DP=119     GT:GQ:DP        1|1:100:32      1|1:77:24       1|1:100:64
+3      127507086       rs13318221      G       A       .       PASS    AA=A;DP=129     GT:GQ:DP        1|1:100:32      1|1:77:24       1|1:100:71
+3      95989029        rs6766302       G       A       .       PASS    AA=A;DP=126     GT:GQ:DP        1|1:100:32      1|1:77:24       1|1:100:72
+5      63331833        rs378864        C       T       .       PASS    AA=T;DP=114     GT:GQ:DP        1|1:100:32      1|1:77:25       1|1:100:57
+4      11155677        rs733936        G       T       .       PASS    AA=T;DP=122     GT:GQ:DP        1|1:100:32      1|1:77:25       1|1:100:65
+2      36285203        rs1569254       T       C       .       PASS    AA=C;DP=123     GT:GQ:DP        1|1:100:32      1|1:77:26       1|1:100:66
+6      90064400        rs912979        T       C       .       PASS    AA=C;DP=140     GT:GQ:DP        1|1:100:32      1|1:80:25       1|1:100:60
+3      72248862        rs9863207       G       A       .       PASS    AA=G;DP=151     GT:GQ:DP        1|1:100:32      1|1:80:25       1|1:100:95
+12     37424588        rs1621467       A       G       .       PASS    AA=G;DP=105     GT:GQ:DP        1|1:100:32      1|1:80:27       1|1:100:34
+16     3979142 rs2072341       A       G       .       PASS    AA=N;DP=127     GT:GQ:DP        1|1:100:32      1|1:80:27       1|1:100:69
+2      23277897        rs6741927       C       T       .       PASS    AA=T;DP=108     GT:GQ:DP        1|1:100:32      1|1:83:26       1|1:100:42
+11     131688730       rs3099772       A       G       .       PASS    AA=G;DP=135     GT:GQ:DP        1|1:100:32      1|1:83:26       1|1:100:76
+7      36049435        rs2718017       G       A       .       PASS    AA=A;DP=133     GT:GQ:DP        1|1:100:32      1|1:83:26       1|1:100:77
+2      18139234        rs7570573       G       C       .       PASS    AA=C;DP=137     GT:GQ:DP        1|1:100:32      1|1:83:27       1|1:100:76
+1      7123162 rs9434855       A       G       .       PASS    AA=G;DP=131     GT:GQ:DP        1|1:100:32      1|1:86:27       1|1:100:70
+12     117797173       rs2730443       A       G       .       PASS    AA=G;DP=130     GT:GQ:DP        1|1:100:32      1|1:86:27       1|1:100:75
+10     123174865       rs10788178      G       A       .       PASS    AA=A;DP=164     GT:GQ:DP        1|1:100:32      1|1:92:29       1|1:100:58
+4      130070605       rs6856863       A       G       .       PASS    AA=a;DP=124     GT:GQ:DP        1|1:100:32      1|1:92:29       1|1:100:63
+15     56423169        rs424219        A       G       .       PASS    AA=G;DP=130     GT:GQ:DP        1|1:100:32      1|1:92:29       1|1:100:70
+6      149632132       rs4897103       A       G       .       PASS    AA=G;DP=136     GT:GQ:DP        1|1:100:32      1|1:92:30       1|1:100:62
+11     102784727       rs2511498       G       A       .       PASS    AA=G;DP=131     GT:GQ:DP        1|1:100:32      1|1:92:30       1|1:100:66
+2      215605405       rs1464685       C       T       .       PASS    AA=T;DP=122     GT:GQ:DP        1|1:100:32      1|1:92:31       1|1:100:59
+4      172488116       rs333748        G       C       .       PASS    AA=c;DP=129     GT:GQ:DP        1|1:100:32      1|1:95:30       1|1:100:64
+12     68920884        rs7958266       T       A       .       PASS    AA=A;DP=137     GT:GQ:DP        1|1:100:32      1|1:95:30       1|1:100:76
+2      161169349       rs4449152       C       T       .       PASS    AA=T;DP=124     GT:GQ:DP        1|1:100:32      1|1:95:31       1|1:100:56
+3      133380278       rs1554384       T       C       .       PASS    AA=C;DP=141     GT:GQ:DP        1|1:100:32      1|1:97:33       1|1:100:76
+9      2952418 rs10733439      G       T       .       PASS    AA=T;DP=150     GT:GQ:DP        1|1:100:32      1|1:98:31       1|1:100:49
+5      119055867       rs802213        G       C       .       PASS    AA=C;DP=127     GT:GQ:DP        1|1:100:33      1|1:100:36      1|1:100:50
+11     13456852        rs307215        T       C       .       PASS    AA=C;DP=146     GT:GQ:DP        1|1:100:33      1|1:100:36      1|1:100:75
+15     54951934        rs1660956       A       G       .       PASS    AA=G;DP=161     GT:GQ:DP        1|1:100:33      1|1:100:43      1|1:100:75
+2      108356557       rs10197193      A       G       .       PASS    AA=-;DP=101     GT:GQ:DP        1|1:100:33      1|1:11:10       1|1:100:46
+22     49035467        rs5771280       A       T       .       PASS    AA=T;DP=120     GT:GQ:DP        1|1:100:33      1|1:19:13       1|1:100:75
+2      194080509       rs1371641       A       G       .       PASS    AA=G;DP=102     GT:GQ:DP        1|1:100:33      1|1:28:20       1|1:100:51
+18     19322178        rs2651772       G       C       .       PASS    AA=c;DP=101     GT:GQ:DP        1|1:100:33      1|1:29:19       1|1:100:49
+6      44553024        rs9296436       A       G       .       PASS    AA=G;DP=124     GT:GQ:DP        1|1:100:33      1|1:29:19       1|1:100:66
+11     11557756        rs7122955       T       C       .       PASS    AA=C;DP=89      GT:GQ:DP        1|1:100:33      1|1:32:9        1|1:100:48
+1      238085981       rs497716        C       T       .       PASS    AA=T;DP=122;HM2 GT:GQ:DP        1|1:100:33      1|1:35:21       1|1:100:71
+7      142885014       rs1404634       A       G       .       PASS    AA=G;DP=122     GT:GQ:DP        1|1:100:33      1|1:38:22       1|1:100:67
+21     45467192        rs2253763       T       C       .       PASS    AA=C;DP=100     GT:GQ:DP        1|1:100:33      1|1:39:17       1|1:100:43
+5      79280778        rs10805929      T       C       .       PASS    AA=C;DP=119     GT:GQ:DP        1|1:100:33      1|1:40:18       1|1:100:61
+12     63602437        rs523106        A       G       .       PASS    AA=G;DP=128     GT:GQ:DP        1|1:100:33      1|1:40:19       1|1:100:76
+4      94479123        rs6827657       C       T       .       PASS    AA=C;DP=94      GT:GQ:DP        1|1:100:33      1|1:41:12       1|1:100:37
+2      50670974        rs6733430       T       C       .       PASS    AA=T;DP=100     GT:GQ:DP        1|1:100:33      1|1:41:12       1|1:100:55
+13     76942563        rs4885470       A       G       .       PASS    AA=G;DP=101     GT:GQ:DP        1|1:100:33      1|1:41:12       1|1:100:56
+6      13614885        rs2560789       A       G       .       PASS    AA=G;DP=130     GT:GQ:DP        1|1:100:33      1|1:41:12       1|1:100:87
+15     58633464        rs7165455       T       C       .       PASS    AA=C;DP=100     GT:GQ:DP        1|1:100:33      1|1:41:13       1|1:100:46
+9      71200906        rs2244720       T       C       .       PASS    AA=C;DP=101     GT:GQ:DP        1|1:100:33      1|1:41:13       1|1:100:53
+12     111509176       rs12580178      A       G       .       PASS    AA=G;DP=115     GT:GQ:DP        1|1:100:33      1|1:41:23       1|1:100:59
+11     111505527       rs648788        T       C       .       PASS    AA=C;DP=114     GT:GQ:DP        1|1:100:33      1|1:42:18       1|1:100:63
+11     126162045       rs1946051       A       C       .       PASS    AA=C;DP=108     GT:GQ:DP        1|1:100:33      1|1:44:15       1|1:100:49
+12     80929125        rs2729728       T       C       .       PASS    AA=C;DP=107     GT:GQ:DP        1|1:100:33      1|1:45:19       1|1:100:55
+1      14167336        rs6429815       A       C       .       PASS    AA=C;DP=139;HM2 GT:GQ:DP        1|1:100:33      1|1:45:26       1|1:100:81
+5      120766166       rs711415        C       T       .       PASS    AA=C;DP=95      GT:GQ:DP        1|1:100:33      1|1:47:15       1|1:100:48
+18     2319425 rs6506004       T       A       .       PASS    AA=A;DP=117     GT:GQ:DP        1|1:100:33      1|1:47:15       1|1:100:67
+6      121379429       rs6907838       G       T       .       PASS    AA=T;DP=146     GT:GQ:DP        1|1:100:33      1|1:47:33       1|1:100:78
+2      65829748        rs3845820       T       G       .       PASS    AA=G;DP=121     GT:GQ:DP        1|1:100:33      1|1:49:16       1|1:100:76
+17     61111632        rs232115        G       A       .       PASS    AA=A;DP=109     GT:GQ:DP        1|1:100:33      1|1:50:15       1|1:100:60
+15     32267173        rs7178002       T       C       .       PASS    AA=T;DP=121     GT:GQ:DP        1|1:100:33      1|1:50:15       1|1:100:75
+1      222889105       rs10799590      G       A       .       PASS    AA=A;DP=127;HM2;HM3     GT:GQ:DP        1|1:100:33      1|1:50:15       1|1:100:80
+6      12513701        rs7774341       A       T       .       PASS    AA=T;DP=112     GT:GQ:DP        1|1:100:33      1|1:50:34       1|1:100:35
+6      162667095       rs4709597       T       A       .       PASS    AA=A;DP=132     GT:GQ:DP        1|1:100:33      1|1:53:16       1|1:100:69
+9      85504015        rs7865296       A       C       .       PASS    AA=A;DP=132     GT:GQ:DP        1|1:100:33      1|1:53:16       1|1:100:85
+20     62124893        rs816930        C       T       .       PASS    AA=T;DP=117     GT:GQ:DP        1|1:100:33      1|1:53:17       1|1:100:56
+13     104283920       rs2152170       A       G       .       PASS    AA=G;DP=106     GT:GQ:DP        1|1:100:33      1|1:53:18       1|1:100:33
+3      51097790        rs7653451       T       C       .       PASS    AA=T;DP=109     GT:GQ:DP        1|1:100:33      1|1:53:18       1|1:100:59
+15     40104112        rs2724940       G       T       .       PASS    AA=t;DP=127     GT:GQ:DP        1|1:100:33      1|1:54:27       1|1:100:57
+9      114796196       rs974230        T       C       .       PASS    AA=C;DP=104     GT:GQ:DP        1|1:100:33      1|1:56:17       1|1:100:43
+1      5669960 rs770706        A       G       .       PASS    AA=G;DP=104;HM2;HM3     GT:GQ:DP        1|1:100:33      1|1:56:17       1|1:100:53
+6      31306486        rs3130939       A       G       .       PASS    AA=N;DP=112     GT:GQ:DP        1|1:100:33      1|1:56:17       1|1:100:61
+8      134439556       rs2976556       T       C       .       PASS    AA=C;DP=122     GT:GQ:DP        1|1:100:33      1|1:56:17       1|1:100:78
+14     38818231        rs7158558       G       A       .       PASS    AA=A;DP=99      GT:GQ:DP        1|1:100:33      1|1:56:18       1|1:100:37
+4      485321  rs13119378      T       C       .       PASS    AA=t;DP=127     GT:GQ:DP        1|1:100:33      1|1:56:19       1|1:100:73
+18     52854517        rs1657381       C       T       .       PASS    AA=T;DP=115     GT:GQ:DP        1|1:100:33      1|1:56:20       1|1:100:51
+4      183661358       rs7670943       T       C       .       PASS    AA=t;DP=113     GT:GQ:DP        1|1:100:33      1|1:58:23       1|1:100:57
+6      87890034        rs9344676       T       G       .       PASS    AA=G;DP=96      GT:GQ:DP        1|1:100:33      1|1:59:18       1|1:100:45
+20     50145362        rs6096750       T       G       .       PASS    AA=T;DP=110     GT:GQ:DP        1|1:100:33      1|1:59:18       1|1:100:56
+10     119004013       rs2072362       C       T       .       PASS    AA=T;DP=113     GT:GQ:DP        1|1:100:33      1|1:59:18       1|1:100:62
+15     86863375        rs7402989       C       A       .       PASS    AA=C;DP=116     GT:GQ:DP        1|1:100:33      1|1:59:18       1|1:100:64
+3      195578076       rs7642341       C       T       .       PASS    AA=T;DP=115     GT:GQ:DP        1|1:100:33      1|1:59:18       1|1:100:64
+12     123486766       rs1702325       T       C       .       PASS    AA=t;DP=109     GT:GQ:DP        1|1:100:33      1|1:59:19       1|1:100:38
+11     130621581       rs1793772       C       G       .       PASS    AA=G;DP=118     GT:GQ:DP        1|1:100:33      1|1:59:19       1|1:100:66
+12     97281829        rs2032748       T       G       .       PASS    AA=G;DP=125     GT:GQ:DP        1|1:100:33      1|1:59:19       1|1:100:72
+5      126852903       rs2455485       T       C       .       PASS    AA=C;DP=114     GT:GQ:DP        1|1:100:33      1|1:59:21       1|1:100:63
+3      61644171        rs6801886       G       T       .       PASS    AA=T;DP=115     GT:GQ:DP        1|1:100:33      1|1:62:19       1|1:100:61
+2      114389383       rs11686581      A       G       .       PASS    AA=G;DP=128     GT:GQ:DP        1|1:100:33      1|1:62:20       1|1:100:77
+17     52369216        rs8072942       T       C       .       PASS    AA=C;DP=105     GT:GQ:DP        1|1:100:33      1|1:62:21       1|1:100:45
+4      35383677        rs13140355      T       C       .       PASS    AA=N;DP=112     GT:GQ:DP        1|1:100:33      1|1:63:27       1|1:100:55
+2      184339319       rs13412829      C       A       .       PASS    AA=A;DP=113     GT:GQ:DP        1|1:100:33      1|1:65:20       1|1:100:61
+4      20442232        rs6447984       A       G       .       PASS    AA=G;DP=121     GT:GQ:DP        1|1:100:33      1|1:65:21       1|1:100:67
+20     29880488        rs6058470       A       T       .       PASS    AA=A;DP=126     GT:GQ:DP        1|1:100:33      1|1:65:21       1|1:100:73
+19     49222230        rs8101750       T       C       .       PASS    AA=C;DP=116     GT:GQ:DP        1|1:100:33      1|1:65:22       1|1:100:61
+1      13779350        rs12070058      T       A       .       PASS    AA=A;DP=125;HM2 GT:GQ:DP        1|1:100:33      1|1:65:22       1|1:100:72
+17     5520697 rs7223272       C       A       .       PASS    AA=C;DP=151     GT:GQ:DP        1|1:100:33      1|1:66:32       1|1:100:84
+2      129916303       rs4621122       T       G       .       PASS    AA=G;DP=130     GT:GQ:DP        1|1:100:33      1|1:67:28       1|1:100:69
+3      5931093 rs9844874       G       A       .       PASS    AA=G;DP=166     GT:GQ:DP        1|1:100:33      1|1:67:32       1|1:100:62
+13     59725484        rs700403        A       G       .       PASS    AA=a;DP=114     GT:GQ:DP        1|1:100:33      1|1:68:21       1|1:100:59
+3      32213244        rs4955248       C       A       .       PASS    AA=A;DP=138     GT:GQ:DP        1|1:100:33      1|1:68:21       1|1:100:84
+2      84755611        rs1918696       G       T       .       PASS    AA=T;DP=123     GT:GQ:DP        1|1:100:33      1|1:68:22       1|1:100:64
+11     92766562        rs2658773       A       G       .       PASS    AA=G;DP=127     GT:GQ:DP        1|1:100:33      1|1:68:22       1|1:100:70
+15     98930662        rs4965677       A       G       .       PASS    AA=G;DP=125     GT:GQ:DP        1|1:100:33      1|1:68:22       1|1:100:72
+12     55112077        rs774038        C       G       .       PASS    AA=G;DP=126     GT:GQ:DP        1|1:100:33      1|1:68:22       1|1:100:75
+6      155386873       rs7746011       C       A       .       PASS    AA=A;DP=119     GT:GQ:DP        1|1:100:33      1|1:68:23       1|1:100:63
+10     10899864        rs10905835      A       G       .       PASS    AA=G;DP=141     GT:GQ:DP        1|1:100:33      1|1:69:30       1|1:100:79
+1      53055676        rs503296        A       G       .       PASS    AA=G;DP=118     GT:GQ:DP        1|1:100:33      1|1:69:33       1|1:100:43
+20     39170125        rs4142395       T       C       .       PASS    AA=C;DP=144     GT:GQ:DP        1|1:100:33      1|1:69:33       1|1:100:76
+18     7683309 rs608028        T       C       .       PASS    AA=C;DP=155     GT:GQ:DP        1|1:100:33      1|1:69:33       1|1:100:86
+15     78409919        rs6495490       T       C       .       PASS    AA=C;DP=101     GT:GQ:DP        1|1:100:33      1|1:71:22       1|1:100:45
+20     2502964 .       A       C       .       PASS    AA=C;DP=99      GT:GQ:DP        1|1:100:33      1|1:71:22       1|1:100:45
+16     81184458        rs6565046       C       A       .       PASS    AA=A;DP=115     GT:GQ:DP        1|1:100:33      1|1:71:22       1|1:100:59
+15     33511576        rs11632343      T       C       .       PASS    AA=T;DP=114     GT:GQ:DP        1|1:100:33      1|1:71:22       1|1:100:61
+8      109641149       rs4735070       C       T       .       PASS    AA=T;DP=113     GT:GQ:DP        1|1:100:33      1|1:71:22       1|1:100:61
+6      68059626        rs3912915       A       G       .       PASS    AA=G;DP=121     GT:GQ:DP        1|1:100:33      1|1:71:22       1|1:100:65
+9      128309830       rs929561        T       C       .       PASS    AA=C;DP=123     GT:GQ:DP        1|1:100:33      1|1:71:22       1|1:100:68
+19     34480470        rs17624382      G       C       .       PASS    AA=G;DP=146     GT:GQ:DP        1|1:100:33      1|1:71:22       1|1:100:72
+20     45226713        rs3092447       T       G       .       PASS    AA=G;DP=129     GT:GQ:DP        1|1:100:33      1|1:71:23       1|1:100:70
+15     83443269        rs8038149       G       C       .       PASS    AA=C;DP=129     GT:GQ:DP        1|1:100:33      1|1:71:23       1|1:100:76
+3      136220992       rs36056 G       T       .       PASS    AA=T;DP=103     GT:GQ:DP        1|1:100:33      1|1:74:23       1|1:100:37
+2      4539061 rs13012375      G       A       .       PASS    AA=A;DP=139     GT:GQ:DP        1|1:100:33      1|1:74:23       1|1:100:42
+13     21593092        rs4769198       T       C       .       PASS    AA=C;DP=110     GT:GQ:DP        1|1:100:33      1|1:74:23       1|1:100:48
+5      110628243       rs411689        G       C       .       PASS    AA=C;DP=149     GT:GQ:DP        1|1:100:33      1|1:74:23       1|1:100:53
+2      212015322       rs1836715       G       A       .       PASS    AA=A;DP=111     GT:GQ:DP        1|1:100:33      1|1:74:23       1|1:100:55
+13     110033826       rs9515257       C       G       .       PASS    AA=G;DP=141     GT:GQ:DP        1|1:100:33      1|1:74:24       1|1:100:85
+6      23734621        rs483790        C       G       .       PASS    AA=G;DP=119     GT:GQ:DP        1|1:100:33      1|1:74:26       1|1:100:59
+3      67361329        rs4322946       G       T       .       PASS    AA=T;DP=128     GT:GQ:DP        1|1:100:33      1|1:76:28       1|1:100:67
+4      17454336        rs7688403       G       C       .       PASS    AA=N;DP=117     GT:GQ:DP        1|1:100:33      1|1:77:24       1|1:100:58
+2      102049463       rs2192751       G       A       .       PASS    AA=G;DP=130     GT:GQ:DP        1|1:100:33      1|1:77:24       1|1:100:74
+13     35724070        rs1170934       C       T       .       PASS    AA=T;DP=130     GT:GQ:DP        1|1:100:33      1|1:77:25       1|1:100:69
+5      54301289        rs1023674       G       T       .       PASS    AA=T;DP=127     GT:GQ:DP        1|1:100:33      1|1:77:35       1|1:100:64
+12     16263352        rs1799510       G       A       .       PASS    AA=A;DP=106     GT:GQ:DP        1|1:100:33      1|1:80:25       1|1:100:50
+17     10436775        rs9901812       A       G       .       PASS    AA=G;DP=113     GT:GQ:DP        1|1:100:33      1|1:80:25       1|1:100:55
+19     15039820        rs6512008       C       T       .       PASS    AA=T;DP=114     GT:GQ:DP        1|1:100:33      1|1:80:25       1|1:100:55
+9      105406677       rs2133499       G       A       .       PASS    AA=-;DP=120     GT:GQ:DP        1|1:100:33      1|1:80:25       1|1:100:62
+10     115351307       rs2419843       G       A       .       PASS    AA=A;DP=122     GT:GQ:DP        1|1:100:33      1|1:80:25       1|1:100:64
+13     41998767        rs346585        A       C       .       PASS    AA=C;DP=124     GT:GQ:DP        1|1:100:33      1|1:80:25       1|1:100:67
+10     18331294        rs7894090       G       A       .       PASS    AA=A;DP=137     GT:GQ:DP        1|1:100:33      1|1:80:25       1|1:100:77
+3      36479285        rs6767011       A       G       .       PASS    AA=G;DP=133     GT:GQ:DP        1|1:100:33      1|1:80:26       1|1:100:69
+4      55786841        rs2412628       C       A       .       PASS    AA=A;DP=135     GT:GQ:DP        1|1:100:33      1|1:80:26       1|1:100:74
+9      122543259       rs7033339       G       A       .       PASS    AA=G;DP=117     GT:GQ:DP        1|1:100:33      1|1:80:27       1|1:100:40
+14     72364579        rs4140952       A       G       .       PASS    AA=G;DP=141     GT:GQ:DP        1|1:100:33      1|1:80:27       1|1:100:82
+16     25258126        rs8048532       C       T       .       PASS    AA=C;DP=126     GT:GQ:DP        1|1:100:33      1|1:83:26       1|1:100:58
+13     102961228       rs7335321       G       A       .       PASS    AA=A;DP=125     GT:GQ:DP        1|1:100:33      1|1:83:27       1|1:100:63
+1      8006638 rs371452        C       T       .       PASS    AA=T;DP=127     GT:GQ:DP        1|1:100:33      1|1:83:27       1|1:100:67
+20     49329226        rs6013129       C       T       .       PASS    AA=T;DP=144     GT:GQ:DP        1|1:100:33      1|1:85:34       1|1:100:75
+11     123032279       rs1148085       C       T       .       PASS    AA=T;DP=138     GT:GQ:DP        1|1:100:33      1|1:86:28       1|1:100:76
+11     33339661        rs3847595       A       G       .       PASS    AA=G;DP=149     GT:GQ:DP        1|1:100:33      1|1:87:35       1|1:100:83
+13     48729117        rs7325076       C       T       .       PASS    AA=T;DP=128     GT:GQ:DP        1|1:100:33      1|1:89:28       1|1:100:68
+13     24870769        rs1924776       A       G       .       PASS    AA=A;DP=148     GT:GQ:DP        1|1:100:33      1|1:89:28       1|1:100:88
+5      41513935        rs523442        A       G       .       PASS    AA=G;DP=120     GT:GQ:DP        1|1:100:33      1|1:89:29       1|1:100:57
+11     126771361       rs10790878      G       A       .       PASS    AA=G;DP=132     GT:GQ:DP        1|1:100:33      1|1:89:30       1|1:100:69
+2      193245373       rs934955        C       G       .       PASS    AA=G;DP=135     GT:GQ:DP        1|1:100:33      1|1:92:29       1|1:100:71
+1      228109766       rs2683459       T       C       .       PASS    AA=C;DP=122;HM2 GT:GQ:DP        1|1:100:33      1|1:95:31       1|1:100:46
+10     108978079       rs2418955       C       A       .       PASS    AA=A;DP=131     GT:GQ:DP        1|1:100:33      1|1:95:31       1|1:100:66
+18     26408507        rs2955860       C       G       .       PASS    AA=G;DP=121     GT:GQ:DP        1|1:100:33      1|1:95:32       1|1:100:45
+14     77904877        rs7146066       A       G       .       PASS    AA=A;DP=145     GT:GQ:DP        1|1:100:33      1|1:95:32       1|1:100:81
+16     8337654 rs187616        C       G       .       PASS    AA=c;DP=124     GT:GQ:DP        1|1:100:33      1|1:98:31       1|1:100:61
+5      75678203        rs246805        T       A       .       PASS    AA=A;DP=143     GT:GQ:DP        1|1:100:33      1|1:98:31       1|1:100:79
+20     7943865 rs2205782       C       T       .       PASS    AA=T;DP=133     GT:GQ:DP        1|1:100:33      1|1:98:37       1|1:100:62
+11     44706387        rs4755278       C       G       .       PASS    AA=G;DP=110     GT:GQ:DP        1|1:100:34      1|0:100:17      1|1:100:60
+4      174838131       rs6843697       C       G       .       PASS    AA=G;DP=110     GT:GQ:DP        1|1:100:34      1|0:100:17      1|1:100:60
+8      16858036        rs1689854       A       G       .       PASS    AA=a;DP=113     GT:GQ:DP        1|1:100:34      1|0:100:18      1|1:100:62
+7      135931555       rs1477528       T       A       .       PASS    AA=A;DP=137     GT:GQ:DP        1|1:100:34      1|0:100:23      1|1:100:80
+20     2576987 rs6115288       C       A       .       PASS    AA=C;DP=125     GT:GQ:DP        1|1:100:34      1|0:100:25      1|1:100:65
+4      58341174        .       T       C       .       PASS    AA=T;DP=143     GT:GQ:DP        1|1:100:34      1|0:100:27      1|1:100:82
+1      186009222       rs2430110       T       A       .       PASS    AA=A;DP=156;HM3 GT:GQ:DP        1|1:100:34      1|0:100:29      1|1:100:56
+3      133171746       rs753120        T       C       .       PASS    AA=C;DP=140     GT:GQ:DP        1|1:100:34      1|0:100:31      1|1:100:76
+5      153409380       rs689715        T       A       .       PASS    AA=T;DP=116     GT:GQ:DP        1|1:100:34      1|0:100:31      1|1:91:42
+7      22259242        rs1610047       T       G       .       PASS    AA=G;DP=141     GT:GQ:DP        1|1:100:34      1|0:100:32      1|1:100:75
+15     88057480        rs7181125       G       T       .       PASS    AA=T;DP=148     GT:GQ:DP        1|1:100:34      1|0:100:32      1|1:100:83
+18     4717414 rs1940858       T       G       .       PASS    AA=G;DP=121     GT:GQ:DP        1|1:100:34      1|0:100:33      1|1:100:56
+11     22377700        rs2665715       C       G       .       PASS    AA=C;DP=154     GT:GQ:DP        1|1:100:34      1|0:100:38      1|1:100:81
+14     19866718        rs8022565       T       C       .       PASS    AA=T;DP=139     GT:GQ:DP        1|1:100:34      1|0:100:40      1|1:100:64
+2      104164687       rs13415626      C       T       .       PASS    AA=C;DP=124     GT:GQ:DP        1|1:100:34      1|0:36:19       1|1:100:61
+4      161624288       rs1020130       T       C       .       PASS    AA=C;DP=105     GT:GQ:DP        1|1:100:34      1|0:46:18       1|1:100:53
+10     1735303 rs6560763       C       T       .       PASS    AA=C;DP=122     GT:GQ:DP        1|1:100:34      1|0:79:24       1|1:100:51
+1      83042718        rs472138        C       G       .       PASS    AA=C;DP=121;HM2 GT:GQ:DP        1|1:100:34      1|0:86:16       1|1:100:62
+16     5496173 .       A       C       .       PASS    AA=A;DP=156     GT:GQ:DP        1|1:100:34      1|1:100:32      1|1:100:88
+12     43206832        rs7980297       C       T       .       PASS    AA=T;DP=130     GT:GQ:DP        1|1:100:34      1|1:100:33      1|1:100:65
+15     58966178        rs8036723       G       A       .       PASS    AA=A;DP=134     GT:GQ:DP        1|1:100:34      1|1:100:34      1|1:100:65
+9      21496986        rs1332183       C       A       .       PASS    AA=A;DP=149     GT:GQ:DP        1|1:100:34      1|1:100:34      1|1:100:83
+9      105509218       rs364597        G       A       .       PASS    AA=G;DP=137     GT:GQ:DP        1|1:100:34      1|1:100:35      1|1:100:69
+5      118195889       rs2162888       C       T       .       PASS    AA=T;DP=176     GT:GQ:DP        1|1:100:34      1|1:100:38      1|1:100:54
+8      57580478        rs1440747       T       G       .       PASS    AA=G;DP=143     GT:GQ:DP        1|1:100:34      1|1:100:40      1|1:100:68
+22     47740060        rs5770497       T       G       .       PASS    AA=G;DP=134     GT:GQ:DP        1|1:100:34      1|1:24:19       1|1:100:80
+17     35907465        rs4890088       C       A       .       PASS    AA=A;DP=99      GT:GQ:DP        1|1:100:34      1|1:26:7        1|1:100:60
+5      33240362        rs7443726       G       A       .       PASS    AA=A;DP=102     GT:GQ:DP        1|1:100:34      1|1:29:19       1|1:100:44
+10     134460669       rs2767445       A       G       .       PASS    AA=G;DP=94      GT:GQ:DP        1|1:100:34      1|1:29:8        1|1:100:51
+17     22495391        rs6505102       A       G       .       PASS    AA=N;DP=118     GT:GQ:DP        1|1:100:34      1|1:30:17       1|1:100:67
+1      89690618        rs1599145       T       C       .       PASS    AA=T;DP=112;HM2 GT:GQ:DP        1|1:100:34      1|1:30:24       1|1:100:41
+8      1882933 rs13276575      T       C       .       PASS    AA=t;DP=108     GT:GQ:DP        1|1:100:34      1|1:32:10       1|1:100:64
+12     3608663 rs7978037       A       T       .       PASS    AA=T;DP=113     GT:GQ:DP        1|1:100:34      1|1:34:15       1|1:100:58
+12     123550781       rs1242997       G       A       .       PASS    AA=G;DP=96      GT:GQ:DP        1|1:100:34      1|1:35:10       1|1:100:52
+14     104747093       rs3087836       G       C       .       PASS    AA=G;DP=101     GT:GQ:DP        1|1:100:34      1|1:35:11       1|1:100:57
+5      127989346       rs10478816      T       C       .       PASS    AA=C;DP=113     GT:GQ:DP        1|1:100:34      1|1:36:17       1|1:100:64
+20     24692927        rs2424678       T       A       .       PASS    AA=A;DP=125     GT:GQ:DP        1|1:100:34      1|1:38:14       1|1:100:78
+22     47809290        rs6009360       C       T       .       PASS    AA=C;DP=131     GT:GQ:DP        1|1:100:34      1|1:40:20       1|1:100:75
+10     6608621 rs608694        C       G       .       PASS    AA=G;DP=111     GT:GQ:DP        1|1:100:34      1|1:41:12       1|1:100:54
+12     34423232        rs10844862      A       T       .       PASS    AA=.;DP=103     GT:GQ:DP        1|1:100:34      1|1:41:13       1|1:100:58
+5      88376423        rs7725469       A       G       .       PASS    AA=G;DP=142     GT:GQ:DP        1|1:100:34      1|1:43:24       1|1:100:83
+17     4795225 rs366577        T       C       .       PASS    AA=C;DP=101     GT:GQ:DP        1|1:100:34      1|1:44:14       1|1:100:41
+6      85942044        rs7771039       T       G       .       PASS    AA=G;DP=114     GT:GQ:DP        1|1:100:34      1|1:44:27       1|1:100:53
+6      88427779        rs6454641       T       C       .       PASS    AA=C;DP=112     GT:GQ:DP        1|1:100:34      1|1:46:19       1|1:100:57
+2      190296020       rs1225081       C       T       .       PASS    AA=T;DP=100     GT:GQ:DP        1|1:100:34      1|1:47:14       1|1:100:51
+1      190058839       rs7528316       T       C       .       PASS    AA=C;DP=109;HM2 GT:GQ:DP        1|1:100:34      1|1:47:14       1|1:100:59
+4      82266008        rs1517552       C       A       .       PASS    AA=A;DP=113     GT:GQ:DP        1|1:100:34      1|1:47:14       1|1:100:64
+17     68173696        rs4414537       T       A       .       PASS    AA=A;DP=146     GT:GQ:DP        1|1:100:34      1|1:47:14       1|1:100:95
+7      30959587        rs1894839       T       C       .       PASS    AA=C;DP=121     GT:GQ:DP        1|1:100:34      1|1:47:15       1|1:100:76
+5      107105260       rs256494        G       C       .       PASS    AA=C;DP=107     GT:GQ:DP        1|1:100:34      1|1:47:20       1|1:100:54
+3      3075433 rs163575        T       A       .       PASS    AA=A;DP=123     GT:GQ:DP        1|1:100:34      1|1:49:18       1|1:100:71
+1      163702211       rs190798        T       C       .       PASS    AA=C;DP=141     GT:GQ:DP        1|1:100:34      1|1:50:15       1|1:100:50
+10     13972969        rs2027552       G       A       .       PASS    AA=A;DP=104     GT:GQ:DP        1|1:100:34      1|1:50:15       1|1:100:55
+8      11012327        rs10087081      C       T       .       PASS    AA=c;DP=122     GT:GQ:DP        1|1:100:34      1|1:50:15       1|1:100:76
+1      170400071       rs615091        T       G       .       PASS    AA=G;DP=119     GT:GQ:DP        1|1:100:34      1|1:52:27       1|1:100:60
+4      2369254 rs3128794       T       C       .       PASS    AA=T;DP=128     GT:GQ:DP        1|1:100:34      1|1:53:17       1|1:100:78
+6      114167112       rs2463314       C       T       .       PASS    AA=T;DP=119     GT:GQ:DP        1|1:100:34      1|1:53:19       1|1:100:65
+18     72316427        rs56320718      T       G       .       PASS    AA=T;DP=100     GT:GQ:DP        1|1:100:34      1|1:54:23       1|1:100:35
+1      10169058        rs6667639       C       A       .       PASS    AA=c;DP=113;HM3 GT:GQ:DP        1|1:100:34      1|1:56:17       1|1:100:49
+7      150755021       rs7793301       A       G       .       PASS    AA=G;DP=104     GT:GQ:DP        1|1:100:34      1|1:56:17       1|1:100:53
+6      170173881       rs12183541      T       G       .       PASS    AA=.;DP=115     GT:GQ:DP        1|1:100:34      1|1:56:18       1|1:100:51
+1      220692517       rs4846752       G       C       .       PASS    AA=C;DP=115     GT:GQ:DP        1|1:100:34      1|1:56:18       1|1:100:64
+5      13705392        rs1838679       A       G       .       PASS    AA=a;DP=110     GT:GQ:DP        1|1:100:34      1|1:56:19       1|1:100:58
+14     94478562        rs2789383       G       A       .       PASS    AA=A;DP=123     GT:GQ:DP        1|1:100:34      1|1:56:19       1|1:100:69
+5      38310244        rs2262981       C       G       .       PASS    AA=G;DP=109     GT:GQ:DP        1|1:100:34      1|1:59:18       1|1:100:57
+10     1163641 rs4880769       A       G       .       PASS    AA=G;DP=125     GT:GQ:DP        1|1:100:34      1|1:59:18       1|1:100:62
+3      109738246       rs2603129       A       G       .       PASS    AA=G;DP=124     GT:GQ:DP        1|1:100:34      1|1:59:18       1|1:100:71
+7      147329106       rs10249855      G       A       .       PASS    AA=A;DP=132     GT:GQ:DP        1|1:100:34      1|1:59:18       1|1:100:82
+12     105710111       rs1216005       G       A       .       PASS    AA=A;DP=111     GT:GQ:DP        1|1:100:34      1|1:59:19       1|1:100:56
+2      86665688        rs13023294      A       G       .       PASS    AA=G;DP=130     GT:GQ:DP        1|1:100:34      1|1:59:19       1|1:100:75
+15     66580703        rs895133        A       G       .       PASS    AA=G;DP=131     GT:GQ:DP        1|1:100:34      1|1:59:19       1|1:100:79
+7      25548372        rs2952517       A       G       .       PASS    AA=G;DP=146     GT:GQ:DP        1|1:100:34      1|1:60:28       1|1:100:86
+9      106497353       rs10761073      C       T       .       PASS    AA=c;DP=139     GT:GQ:DP        1|1:100:34      1|1:60:30       1|1:100:68
+1      71284748        rs2817867       T       C       .       PASS    AA=T;DP=125;HM2;HM3     GT:GQ:DP        1|1:100:34      1|1:62:19       1|1:100:71
+7      79612999        rs2040741       A       T       .       PASS    AA=t;DP=126     GT:GQ:DP        1|1:100:34      1|1:62:19       1|1:100:73
+11     107201071       rs1021901       C       G       .       PASS    AA=G;DP=118     GT:GQ:DP        1|1:100:34      1|1:62:20       1|1:100:63
+7      157280073       rs10253086      C       G       .       PASS    AA=G;DP=117     GT:GQ:DP        1|1:100:34      1|1:64:20       1|1:100:65
+6      134834477       rs2327477       T       C       .       PASS    AA=C;DP=118     GT:GQ:DP        1|1:100:34      1|1:65:20       1|1:100:65
+22     34854468        rs6000144       T       C       .       PASS    AA=N;DP=122     GT:GQ:DP        1|1:100:34      1|1:65:20       1|1:100:70
+7      157768022       rs6959283       T       C       .       PASS    AA=C;DP=125     GT:GQ:DP        1|1:100:34      1|1:65:20       1|1:100:72
+6      29987890        rs2524023       C       T       .       PASS    AA=.;DP=142     GT:GQ:DP        1|1:100:34      1|1:65:20       1|1:100:74
+17     74408942        rs4789863       T       C       .       PASS    AA=T;DP=129     GT:GQ:DP        1|1:100:34      1|1:65:21       1|1:100:74
+9      18881040        rs7030565       G       A       .       PASS    AA=A;DP=108     GT:GQ:DP        1|1:100:34      1|1:65:23       1|1:100:51
+18     72250379        rs690243        T       C       .       PASS    AA=C;DP=102     GT:GQ:DP        1|1:100:34      1|1:66:26       1|1:100:35
+6      53695413        rs7774024       G       A       .       PASS    AA=A;DP=102     GT:GQ:DP        1|1:100:34      1|1:68:21       1|1:100:47
+20     16577423        rs6111221       G       A       .       PASS    AA=g;DP=115     GT:GQ:DP        1|1:100:34      1|1:68:21       1|1:100:58
+3      191826822       rs11927365      G       A       .       PASS    AA=G;DP=130     GT:GQ:DP        1|1:100:34      1|1:68:21       1|1:100:70
+16     7237182 rs4331350       A       G       .       PASS    AA=G;DP=141     GT:GQ:DP        1|1:100:34      1|1:68:21       1|1:100:90
+18     9834729 rs471999        G       A       .       PASS    AA=A;DP=116     GT:GQ:DP        1|1:100:34      1|1:68:22       1|1:100:49
+13     27064508        rs1575523       A       G       .       PASS    AA=G;DP=116     GT:GQ:DP        1|1:100:34      1|1:68:22       1|1:100:58
+2      204910906       rs10932059      A       G       .       PASS    AA=G;DP=124     GT:GQ:DP        1|1:100:34      1|1:68:22       1|1:100:70
+4      8711122 rs4696906       A       G       .       PASS    AA=G;DP=138     GT:GQ:DP        1|1:100:34      1|1:68:22       1|1:100:82
+9      128222177       rs887660        G       C       .       PASS    AA=N;DP=140     GT:GQ:DP        1|1:100:34      1|1:68:22       1|1:100:84
+5      61153029        rs4700442       A       G       .       PASS    AA=G;DP=119     GT:GQ:DP        1|1:100:34      1|1:68:23       1|1:100:56
+17     1228267 rs10521112      T       C       .       PASS    AA=t;DP=144     GT:GQ:DP        1|1:100:34      1|1:69:33       1|1:100:78
+8      117344159       rs698744        G       A       .       PASS    AA=A;DP=101     GT:GQ:DP        1|1:100:34      1|1:71:22       1|1:100:35
+16     53181437        rs1151280       T       C       .       PASS    AA=T;DP=105     GT:GQ:DP        1|1:100:34      1|1:71:22       1|1:100:40
+6      127915049       rs1512456       T       G       .       PASS    AA=G;DP=113     GT:GQ:DP        1|1:100:34      1|1:71:22       1|1:100:57
+9      84293285        rs1330823       C       T       .       PASS    AA=T;DP=121     GT:GQ:DP        1|1:100:34      1|1:71:22       1|1:100:65
+12     75101223        rs908684        T       C       .       PASS    AA=C;DP=138     GT:GQ:DP        1|1:100:34      1|1:71:22       1|1:100:72
+20     20181949        rs6046760       A       G       .       PASS    AA=A;DP=129     GT:GQ:DP        1|1:100:34      1|1:71:22       1|1:100:72
+19     15948698        rs62116765      A       T       .       PASS    AA=T;DP=129     GT:GQ:DP        1|1:100:34      1|1:71:22       1|1:100:73
+2      177976091       rs1901823       T       A       .       PASS    AA=T;DP=137     GT:GQ:DP        1|1:100:34      1|1:71:22       1|1:100:80
+9      80626779        rs7867205       G       A       .       PASS    AA=A;DP=131     GT:GQ:DP        1|1:100:34      1|1:71:23       1|1:100:73
+21     34270595        rs743419        C       T       .       PASS    AA=T;DP=129     GT:GQ:DP        1|1:100:34      1|1:71:23       1|1:100:75
+17     57810197        rs8078814       C       T       .       PASS    AA=T;DP=116     GT:GQ:DP        1|1:100:34      1|1:71:24       1|1:100:58
+21     23137721        rs1118467       A       T       .       PASS    AA=t;DP=111     GT:GQ:DP        1|1:100:34      1|1:71:25       1|1:100:45
+2      137368893       rs527853        A       G       .       PASS    AA=G;DP=120     GT:GQ:DP        1|1:100:34      1|1:71:25       1|1:100:62
+8      20611181        rs2467524       A       C       .       PASS    AA=C;DP=138     GT:GQ:DP        1|1:100:34      1|1:72:28       1|1:100:76
+8      5659105 rs1606417       T       C       .       PASS    AA=C;DP=127     GT:GQ:DP        1|1:100:34      1|1:72:32       1|1:100:57
+1      220510201       rs158731        A       G       .       PASS    AA=G;DP=111;HM3 GT:GQ:DP        1|1:100:34      1|1:74:23       1|1:100:57
+18     27596850        rs9304105       T       G       .       PASS    AA=N;DP=135     GT:GQ:DP        1|1:100:34      1|1:74:23       1|1:100:79
+3      27003271        rs9310825       C       A       .       PASS    AA=C;DP=126     GT:GQ:DP        1|1:100:34      1|1:74:24       1|1:100:69
+5      159246958       rs4921239       T       C       .       PASS    AA=t;DP=140     GT:GQ:DP        1|1:100:34      1|1:75:30       1|1:100:79
+2      130084558       rs3094417       C       A       .       PASS    AA=A;DP=116     GT:GQ:DP        1|1:100:34      1|1:77:24       1|1:100:58
+1      234015529       rs6673838       G       A       .       PASS    AA=A;DP=124;HM2;HM3     GT:GQ:DP        1|1:100:34      1|1:77:25       1|1:100:65
+20     58092479        rs242824        G       A       .       PASS    AA=A;DP=149     GT:GQ:DP        1|1:100:34      1|1:78:30       1|1:100:82
+6      108124975       rs846951        G       A       .       PASS    AA=A;DP=152     GT:GQ:DP        1|1:100:34      1|1:79:32       1|1:100:46
+13     71435292        rs2612840       T       A       .       PASS    AA=A;DP=120     GT:GQ:DP        1|1:100:34      1|1:80:25       1|1:100:61
+12     105601302       rs1922433       A       G       .       PASS    AA=G;DP=126     GT:GQ:DP        1|1:100:34      1|1:80:25       1|1:100:67
+1      75136391        rs1359753       A       C       .       PASS    AA=C;DP=134     GT:GQ:DP        1|1:100:34      1|1:80:32       1|1:100:65
+1      6035240 rs12047044      G       T       .       PASS    AA=T;DP=140;HM2;HM3     GT:GQ:DP        1|1:100:34      1|1:83:26       1|1:100:82
+5      57450068        rs6883603       C       T       .       PASS    AA=T;DP=143     GT:GQ:DP        1|1:100:34      1|1:83:26       1|1:100:83
+12     65886814        rs2917850       C       A       .       PASS    AA=A;DP=131     GT:GQ:DP        1|1:100:34      1|1:86:27       1|1:100:59
+9      93277278        rs7035585       G       C       .       PASS    AA=C;DP=163     GT:GQ:DP        1|1:100:34      1|1:86:27       1|1:100:60
+2      181302519       rs6433859       A       G       .       PASS    AA=G;DP=104     GT:GQ:DP        1|1:100:34      1|1:86:28       1|1:100:42
+3      76788392        rs1900659       A       G       .       PASS    AA=G;DP=124     GT:GQ:DP        1|1:100:34      1|1:86:28       1|1:100:61
+1      66758965        rs7354930       T       C       .       PASS    AA=C;DP=146;HM2;HM3     GT:GQ:DP        1|1:100:34      1|1:86:31       1|1:100:68
+22     37620180        rs738306        T       A       .       PASS    AA=t;DP=108     GT:GQ:DP        1|1:100:34      1|1:89:28       1|1:100:42
+11     102715614       rs313424        T       C       .       PASS    AA=C;DP=120     GT:GQ:DP        1|1:100:34      1|1:89:29       1|1:100:57
+11     29042292        rs7933652       A       C       .       PASS    AA=C;DP=126     GT:GQ:DP        1|1:100:34      1|1:89:29       1|1:100:63
+15     41425817        rs8042688       G       A       .       PASS    AA=A;DP=135     GT:GQ:DP        1|1:100:34      1|1:89:29       1|1:100:73
+1      33411323        rs587042        C       T       .       PASS    AA=C;DP=144;HM2;HM3     GT:GQ:DP        1|1:100:34      1|1:92:31       1|1:100:77
+11     12891545        rs1530177       A       T       .       PASS    AA=T;DP=138     GT:GQ:DP        1|1:100:34      1|1:94:35       1|1:100:67
+1      163608520       rs1506942       G       C       .       PASS    AA=C;DP=136;HM2 GT:GQ:DP        1|1:100:34      1|1:95:31       1|1:100:73
+7      106077839       rs10254661      C       T       .       PASS    AA=T;DP=141     GT:GQ:DP        1|1:100:34      1|1:95:31       1|1:100:76
+6      11747000        rs1150572       G       C       .       PASS    AA=G;DP=125     GT:GQ:DP        1|1:100:34      1|1:95:32       1|1:100:63
+10     52520199        rs2339678       T       C       .       PASS    AA=T;DP=128     GT:GQ:DP        1|1:100:35      0|0:100:35      1|0:100:59
+8      35659990        rs55949471      T       C       .       PASS    AA=T;DP=111     GT:GQ:DP        1|1:100:35      0|0:36:18       1|0:100:62
+3      43874747        rs9989976       C       T       .       PASS    AA=C;DP=134     GT:GQ:DP        1|1:100:35      0|0:48:16       1|0:100:83
+14     92163005        rs943655        C       A       .       PASS    AA=C;DP=151     GT:GQ:DP        1|1:100:35      0|0:49:22       1|0:100:47
+3      67939031        rs1585383       A       G       .       PASS    AA=G;DP=139     GT:GQ:DP        1|1:100:35      0|0:50:24       1|0:100:79
+13     93814935        rs9589972       C       T       .       PASS    AA=T;DP=110     GT:GQ:DP        1|1:100:35      0|0:51:17       1|0:100:58
+15     81060811        rs3970696       T       A       .       PASS    AA=A;DP=128     GT:GQ:DP        1|1:100:35      0|0:51:25       1|0:100:63
+13     41757941        rs1375620       A       G       .       PASS    AA=G;DP=113     GT:GQ:DP        1|1:100:35      0|0:54:18       1|0:100:60
+12     53651220        rs10747732      A       T       .       PASS    AA=T;DP=143     GT:GQ:DP        1|1:100:35      0|0:54:28       1|0:100:81
+7      129396566       rs2692437       C       A       .       PASS    AA=C;DP=139     GT:GQ:DP        1|1:100:35      0|0:57:20       1|0:100:66
+4      79649592        rs55744800      C       A       .       PASS    AA=C;DP=136     GT:GQ:DP        1|1:100:35      0|0:57:33       1|0:100:67
+10     21697480        rs1556002       T       C       .       PASS    AA=T;DP=133     GT:GQ:DP        1|1:100:35      0|0:63:28       1|0:100:55
+5      8286506 rs16880169      G       A       .       PASS    AA=G;DP=133     GT:GQ:DP        1|1:100:35      0|0:66:24       1|0:100:76
+6      46654805        rs806485        C       A       .       PASS    AA=C;DP=128     GT:GQ:DP        1|1:100:35      0|0:69:23       1|0:100:73
+5      134446002       rs59392102      G       A       .       PASS    AA=A;DP=138     GT:GQ:DP        1|1:100:35      0|0:69:23       1|0:100:83
+3      140970902       rs11920106      G       A       .       PASS    AA=A;DP=114     GT:GQ:DP        1|1:100:35      0|0:72:24       1|0:100:49
+1      68383828        rs2772312       A       C       .       PASS    AA=C;DP=141;HM2 GT:GQ:DP        1|1:100:35      0|0:78:26       1|0:100:75
+1      39707300        rs6698781       A       G       .       PASS    AA=G;DP=141     GT:GQ:DP        1|1:100:35      0|0:78:28       1|0:100:77
+7      128984166       rs595444        A       G       .       PASS    AA=G;DP=174     GT:GQ:DP        1|1:100:35      0|0:78:30       1|0:100:109
+8      134783923       rs2922490       T       G       .       PASS    AA=T;DP=148     GT:GQ:DP        1|1:100:35      0|0:81:27       1|0:100:72
+18     30809828        rs595287        A       G       .       PASS    AA=A;DP=155     GT:GQ:DP        1|1:100:35      0|0:84:28       1|0:100:89
+1      110949603       rs3887820       C       A       .       PASS    AA=A;DP=156;HM2;HM3     GT:GQ:DP        1|1:100:35      0|0:84:28       1|0:100:93
+14     100985630       .       T       C       .       PASS    AA=T;DP=148     GT:GQ:DP        1|1:100:35      0|0:84:30       1|0:100:82
+9      128817474       rs10115627      A       G       .       PASS    AA=G;DP=120     GT:GQ:DP        1|1:100:35      0|0:90:30       1|0:100:55
+1      176020096       rs12402666      C       T       .       PASS    AA=C;DP=140;HM2 GT:GQ:DP        1|1:100:35      0|0:96:32       1|0:100:70
+22     47091268        rs4400  A       G       .       PASS    AA=G;DP=137     GT:GQ:DP        1|1:100:35      0|0:9:12        1|0:100:92
+13     103174385       rs9586249       A       G       .       PASS    AA=G;DP=115     GT:GQ:DP        1|1:100:35      0|1:100:15      1|0:100:65
+12     128337064       rs6486444       C       T       .       PASS    AA=T;DP=114     GT:GQ:DP        1|1:100:35      0|1:100:16      1|0:100:63
+7      46612699        rs891865        C       T       .       PASS    AA=T;DP=128     GT:GQ:DP        1|1:100:35      0|1:100:19      1|0:100:75
+9      739298  rs12005764      A       G       .       PASS    AA=a;DP=130     GT:GQ:DP        1|1:100:35      0|1:100:20      1|0:100:76
+22     24963357        rs1028494       T       A       .       PASS    AA=A;DP=132     GT:GQ:DP        1|1:100:35      0|1:100:20      1|0:100:77
+1      155525743       rs12130232      G       A       .       PASS    AA=g;DP=142;HM2;HM3     GT:GQ:DP        1|1:100:35      0|1:100:21      1|0:100:42
+2      172773480       rs12467851      G       C       .       PASS    AA=G;DP=148     GT:GQ:DP        1|1:100:35      0|1:100:23      1|0:100:91
+8      50825151        rs13251494      C       A       .       PASS    AA=A;DP=115     GT:GQ:DP        1|1:100:35      0|1:100:24      1|0:100:57
+11     109497937       rs583763        G       A       .       PASS    AA=A;DP=136     GT:GQ:DP        1|1:100:35      0|1:100:24      1|0:100:80
+14     87470239        rs1042029       A       G       .       PASS    AA=A;DP=138     GT:GQ:DP        1|1:100:35      0|1:100:25      1|0:100:77
+6      119157216       rs1688618       T       C       .       PASS    AA=T;DP=144     GT:GQ:DP        1|1:100:35      0|1:100:25      1|0:100:82
+2      170144403       rs13432340      A       G       .       PASS    AA=G;DP=129     GT:GQ:DP        1|1:100:35      0|1:100:26      1|0:100:68
+3      119072167       rs6788088       A       G       .       PASS    AA=a;DP=119     GT:GQ:DP        1|1:100:35      0|1:100:27      1|0:100:60
+17     9510160 rs16958562      A       G       .       PASS    AA=G;DP=140     GT:GQ:DP        1|1:100:35      0|1:100:27      1|0:100:78
+14     50949632        .       T       C       .       PASS    AA=T;DP=145     GT:GQ:DP        1|1:100:35      0|1:100:29      1|0:100:82
+14     71882278        rs2681735       A       G       .       PASS    AA=A;DP=146     GT:GQ:DP        1|1:100:35      0|1:100:31      1|0:100:39
+21     30385016        rs6516948       T       C       .       PASS    AA=C;DP=123     GT:GQ:DP        1|1:100:35      0|1:100:32      1|0:100:58
+17     68855876        rs9899910       A       G       .       PASS    AA=G;DP=141     GT:GQ:DP        1|1:100:35      0|1:51:29       1|0:100:77
+17     78348471        rs623209        T       G       .       PASS    AA=T;DP=117     GT:GQ:DP        1|1:100:35      0|1:60:18       1|0:100:65
+4      5895455 rs10011385      A       G       .       PASS    AA=A;DP=146     GT:GQ:DP        1|1:100:35      0|1:69:20       1|0:100:45
+8      8687866 rs10110711      C       T       .       PASS    AA=C;DP=145     GT:GQ:DP        1|1:100:35      0|1:82:20       1|0:100:90
+7      65662708        rs801199        A       G       .       PASS    AA=N;DP=138     GT:GQ:DP        1|1:100:35      0|1:94:24       1|0:100:74
+18     51296309        rs2958181       A       G       .       PASS    AA=G;DP=127     GT:GQ:DP        1|1:100:35      0|1:94:27       1|0:100:66
+2      10054570        rs2357394       A       G       .       PASS    AA=C;DP=138     GT:GQ:DP        1|1:100:35      0|1:95:29       1|0:100:74
+6      2784788 rs316342        T       C       .       PASS    AA=C;DP=142     GT:GQ:DP        1|1:100:35      0|1:96:29       1|0:100:82
+5      55302269        rs7730934       G       A       .       PASS    AA=A;DP=108     GT:GQ:DP        1|1:100:35      1|0:100:16      1|1:100:59
+8      140740112       rs885724        T       G       .       PASS    AA=T;DP=136     GT:GQ:DP        1|1:100:35      1|0:100:18      1|1:100:84
+11     35174321        rs10836340      T       C       .       PASS    AA=C;DP=125     GT:GQ:DP        1|1:100:35      1|0:100:19      1|1:100:74
+21     24992486        rs2829275       C       T       .       PASS    AA=T;DP=109     GT:GQ:DP        1|1:100:35      1|0:100:20      1|1:100:54
+1      4347607 rs11806957      A       G       .       PASS    AA=G;DP=119;HM2 GT:GQ:DP        1|1:100:35      1|0:100:20      1|1:100:62
+5      68009993        rs4976044       C       G       .       PASS    AA=C;DP=112     GT:GQ:DP        1|1:100:35      1|0:100:22      1|1:100:56
+22     43730438        rs5765102       A       G       .       PASS    AA=G;DP=127     GT:GQ:DP        1|1:100:35      1|0:100:22      1|1:100:72
+9      4853670 rs7867346       T       C       .       PASS    AA=C;DP=125     GT:GQ:DP        1|1:100:35      1|0:100:23      1|1:100:66
+2      151562957       rs2341844       A       T       .       PASS    AA=T;DP=126     GT:GQ:DP        1|1:100:35      1|0:100:24      1|1:100:71
+13     78905552        rs9565500       A       G       .       PASS    AA=G;DP=143     GT:GQ:DP        1|1:100:35      1|0:100:24      1|1:100:83
+5      31747186        rs6450855       C       T       .       PASS    AA=c;DP=164     GT:GQ:DP        1|1:100:35      1|0:100:26      1|1:100:101
+3      125576137       rs7644014       C       A       .       PASS    AA=C;DP=138     GT:GQ:DP        1|1:100:35      1|0:100:26      1|1:100:78
+2      227584373       rs13404750      G       A       .       PASS    AA=G;DP=138     GT:GQ:DP        1|1:100:35      1|0:100:27      1|1:100:75
+18     66886177        rs2187083       A       G       .       PASS    AA=G;DP=121     GT:GQ:DP        1|1:100:35      1|0:100:30      1|1:100:57
+5      172052324       rs7733395       T       C       .       PASS    AA=T;DP=147     GT:GQ:DP        1|1:100:35      1|0:100:30      1|1:100:83
+14     86420669        rs8022577       C       G       .       PASS    AA=C;DP=160     GT:GQ:DP        1|1:100:35      1|0:100:30      1|1:100:96
+10     25851353        rs11014593      G       A       .       PASS    AA=A;DP=121     GT:GQ:DP        1|1:100:35      1|0:100:32      1|1:100:60
+2      137231834       rs13018111      C       T       .       PASS    AA=C;DP=144     GT:GQ:DP        1|1:100:35      1|0:100:32      1|1:100:75
+3      10494105        rs4684694       G       A       .       PASS    AA=A;DP=124     GT:GQ:DP        1|1:100:35      1|0:100:34      1|1:100:57
+16     76746301        rs12716853      A       G       .       PASS    AA=G;DP=151     GT:GQ:DP        1|1:100:35      1|0:11:29       1|1:100:88
+1      201370009       rs4950920       G       A       .       PASS    AA=G;DP=145     GT:GQ:DP        1|1:100:35      1|0:45:25       1|1:100:84
+7      108519458       rs2090051       A       T       .       PASS    AA=T;DP=148     GT:GQ:DP        1|1:100:35      1|0:51:27       1|1:100:83
+15     53859681        rs11071212      A       G       .       PASS    AA=a;DP=113     GT:GQ:DP        1|1:100:35      1|0:56:19       1|1:100:59
+4      120743352       rs13125819      A       G       .       PASS    AA=G;DP=117     GT:GQ:DP        1|1:100:35      1|0:80:16       1|1:100:66
+17     29366331        rs7207606       A       G       .       PASS    AA=a;DP=115     GT:GQ:DP        1|1:100:35      1|0:88:17       1|1:100:50
+1      87460120        rs7552529       G       A       .       PASS    AA=G;DP=138;HM2 GT:GQ:DP        1|1:100:35      1|0:96:29       1|1:100:74
+2      149328629       rs1446844       A       G       .       PASS    AA=G;DP=145     GT:GQ:DP        1|1:100:35      1|0:97:29       1|1:100:81
+8      93282848        rs7008512       G       A       .       PASS    AA=A;DP=129     GT:GQ:DP        1|1:100:35      1|0:99:23       1|1:100:72
+4      85015347        rs10002748      G       A       .       PASS    AA=A;DP=133     GT:GQ:DP        1|1:100:35      1|1:100:32      1|1:100:66
+14     51157815        rs1467529       G       T       .       PASS    AA=T;DP=154     GT:GQ:DP        1|1:100:35      1|1:100:32      1|1:100:88
+2      209157519       rs6729588       A       G       .       PASS    AA=G;DP=136     GT:GQ:DP        1|1:100:35      1|1:100:33      1|1:100:67
+11     82559055        rs11233500      T       C       .       PASS    AA=C;DP=140     GT:GQ:DP        1|1:100:35      1|1:100:33      1|1:100:76
+2      20922521        rs11675569      A       G       .       PASS    AA=A;DP=132     GT:GQ:DP        1|1:100:35      1|1:100:35      1|1:100:49
+8      10330139        rs7013094       C       G       .       PASS    AA=G;DP=139     GT:GQ:DP        1|1:100:35      1|1:100:35      1|1:100:63
+1      94361495        rs1931573       C       A       .       PASS    AA=A;DP=134;HM2 GT:GQ:DP        1|1:100:35      1|1:100:36      1|1:100:64
+11     887825  rs28399210      A       G       .       PASS    AA=-;DP=99      GT:GQ:DP        1|1:100:35      1|1:15:17       1|1:100:41
+5      174796296       rs835616        A       G       .       PASS    AA=A;DP=119     GT:GQ:DP        1|1:100:35      1|1:33:20       1|1:100:64
+2      100860651       rs4622754       G       C       .       PASS    AA=C;DP=112     GT:GQ:DP        1|1:100:35      1|1:35:10       1|1:100:57
+4      146074501       rs812578        C       T       .       PASS    AA=T;DP=115     GT:GQ:DP        1|1:100:35      1|1:35:15       1|1:100:62
+4      82412018        rs6535239       G       A       .       PASS    AA=A;DP=134     GT:GQ:DP        1|1:100:35      1|1:40:20       1|1:100:80
+6      67574847        rs9360233       T       C       .       PASS    AA=C;DP=106     GT:GQ:DP        1|1:100:35      1|1:41:12       1|1:100:58
+16     7923375 rs55853263      G       C       .       PASS    AA=C;DP=122     GT:GQ:DP        1|1:100:35      1|1:41:13       1|1:100:76
+10     112959167       rs10885113      A       G       .       PASS    AA=G;DP=131     GT:GQ:DP        1|1:100:35      1|1:41:14       1|1:100:82
+1      233095945       rs2803007       T       C       .       PASS    AA=C;DP=125;HM2 GT:GQ:DP        1|1:100:35      1|1:41:15       1|1:100:72
+7      15150819        rs2961259       G       A       .       PASS    AA=A;DP=119     GT:GQ:DP        1|1:100:35      1|1:41:23       1|1:100:62
+14     64780333        rs1256487       T       G       .       PASS    AA=t;DP=156     GT:GQ:DP        1|1:100:35      1|1:41:25       1|1:100:93
+18     45009137        rs4939852       A       G       .       PASS    AA=a;DP=122     GT:GQ:DP        1|1:100:35      1|1:44:13       1|1:100:60
+14     91055418        rs4299085       A       G       .       PASS    AA=G;DP=106     GT:GQ:DP        1|1:100:35      1|1:44:14       1|1:100:57
+10     106081177       rs276212        T       C       .       PASS    AA=C;DP=114     GT:GQ:DP        1|1:100:35      1|1:45:19       1|1:100:61
+20     54608163        rs4619672       G       C       .       PASS    AA=C;DP=140     GT:GQ:DP        1|1:100:35      1|1:46:25       1|1:100:85
+22     16700343        rs920817        T       C       .       PASS    AA=C;DP=105     GT:GQ:DP        1|1:100:35      1|1:47:15       1|1:100:43
+3      130720275       rs6439184       A       G       .       PASS    AA=G;DP=106     GT:GQ:DP        1|1:100:35      1|1:47:15       1|1:100:52
+10     119453508       rs4752093       T       A       .       PASS    AA=A;DP=138     GT:GQ:DP        1|1:100:35      1|1:47:20       1|1:100:81
+8      146175504       rs7001127       A       G       .       PASS    AA=a;DP=144     GT:GQ:DP        1|1:100:35      1|1:47:29       1|1:100:80
+21     44809765        rs233324        T       C       .       PASS    AA=t;DP=143     GT:GQ:DP        1|1:100:35      1|1:49:23       1|1:100:86
+18     30978322        rs550139        T       C       .       PASS    AA=C;DP=139     GT:GQ:DP        1|1:100:35      1|1:49:26       1|1:100:77
+8      130359101       rs10101119      G       C       .       PASS    AA=G;DP=153     GT:GQ:DP        1|1:100:35      1|1:50:15       1|1:100:55
+11     119382456       rs4938754       C       T       .       PASS    AA=T;DP=137     GT:GQ:DP        1|1:100:35      1|1:50:15       1|1:100:86
+7      22088367        rs4722087       G       A       .       PASS    AA=A;DP=119     GT:GQ:DP        1|1:100:35      1|1:50:16       1|1:100:70
+7      28110015        rs2158623       G       T       .       PASS    AA=T;DP=137     GT:GQ:DP        1|1:100:35      1|1:50:17       1|1:100:83
+7      36787628        rs4544996       T       G       .       PASS    AA=T;DP=135     GT:GQ:DP        1|1:100:35      1|1:50:22       1|1:100:68
+12     25474211        rs6487484       G       A       .       PASS    AA=A;DP=111     GT:GQ:DP        1|1:100:35      1|1:51:26       1|1:90:50
+20     6302592 rs6054184       A       G       .       PASS    AA=G;DP=108     GT:GQ:DP        1|1:100:35      1|1:53:16       1|1:100:56
+2      3593697 rs6542658       G       A       .       PASS    AA=.;DP=117     GT:GQ:DP        1|1:100:35      1|1:53:16       1|1:100:62
+2      181732276       rs6737752       C       T       .       PASS    AA=T;DP=116     GT:GQ:DP        1|1:100:35      1|1:53:16       1|1:100:63
+8      23740847        rs310322        T       G       .       PASS    AA=G;DP=126     GT:GQ:DP        1|1:100:35      1|1:53:16       1|1:100:76
+12     3279197 rs1465263       G       C       .       PASS    AA=C;DP=93      GT:GQ:DP        1|1:100:35      1|1:53:17       1|1:100:30
+7      73292876        rs178976        A       G       .       PASS    AA=a;DP=105     GT:GQ:DP        1|1:100:35      1|1:53:17       1|1:100:42
+8      85947582        rs10504811      A       G       .       PASS    AA=G;DP=113     GT:GQ:DP        1|1:100:35      1|1:53:17       1|1:100:60
+2      52483120        rs4971816       G       A       .       PASS    AA=G;DP=113     GT:GQ:DP        1|1:100:35      1|1:53:17       1|1:100:62
+9      86820854        rs2378672       C       T       .       PASS    AA=T;DP=125     GT:GQ:DP        1|1:100:35      1|1:53:18       1|1:100:72
+1      181550573       rs636315        A       G       .       PASS    AA=G;DP=106     GT:GQ:DP        1|1:100:35      1|1:54:21       1|1:100:50
+3      136150663       rs11707539      T       A       .       PASS    AA=A;DP=144     GT:GQ:DP        1|1:100:35      1|1:54:24       1|1:100:82
+6      78402429        rs2504289       C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        1|1:100:35      1|1:56:17       1|1:100:63
+8      144923639       rs4074060       T       C       .       PASS    AA=C;DP=106     GT:GQ:DP        1|1:100:35      1|1:56:18       1|1:100:44
+3      127466300       rs10470322      A       C       .       PASS    AA=N;DP=126     GT:GQ:DP        1|1:100:35      1|1:56:18       1|1:100:74
+7      50630228        rs4947705       A       G       .       PASS    AA=G;DP=115     GT:GQ:DP        1|1:100:35      1|1:56:23       1|1:100:58
+20     56189941        rs543676        T       G       .       PASS    AA=G;DP=100     GT:GQ:DP        1|1:100:35      1|1:59:18       1|1:100:39
+2      140382497       rs7606774       G       T       .       PASS    AA=T;DP=128     GT:GQ:DP        1|1:100:35      1|1:59:18       1|1:100:70
+4      56731777        rs6814043       A       G       .       PASS    AA=G;DP=134     GT:GQ:DP        1|1:100:35      1|1:59:18       1|1:100:77
+5      76577081        rs10037599      A       C       .       PASS    AA=A;DP=147     GT:GQ:DP        1|1:100:35      1|1:59:18       1|1:100:85
+7      31960667        rs929605        A       G       .       PASS    AA=G;DP=125     GT:GQ:DP        1|1:100:35      1|1:59:21       1|1:100:70
+14     53855642        rs7155530       G       A       .       PASS    AA=G;DP=119     GT:GQ:DP        1|1:100:35      1|1:60:23       1|1:100:60
+18     47281106        rs1786872       A       G       .       PASS    AA=G;DP=109     GT:GQ:DP        1|1:100:35      1|1:62:19       1|1:100:56
+6      139464274       rs2498661       T       A       .       PASS    AA=A;DP=115     GT:GQ:DP        1|1:100:35      1|1:62:19       1|1:100:59
+15     99629918        rs4965373       A       G       .       PASS    AA=G;DP=122     GT:GQ:DP        1|1:100:35      1|1:62:19       1|1:100:68
+5      13553912        rs230043        C       G       .       PASS    AA=G;DP=128     GT:GQ:DP        1|1:100:35      1|1:62:19       1|1:100:76
+10     92501347        rs4933194       T       C       .       PASS    AA=C;DP=114     GT:GQ:DP        1|1:100:35      1|1:62:21       1|1:100:60
+12     63096514        rs7309367       G       T       .       PASS    AA=T;DP=124     GT:GQ:DP        1|1:100:35      1|1:63:31       1|1:100:55
+10     70098148        rs2173369       C       T       .       PASS    AA=T;DP=121     GT:GQ:DP        1|1:100:35      1|1:64:23       1|1:100:63
+19     15380015        rs7256980       G       A       .       PASS    AA=G;DP=113     GT:GQ:DP        1|1:100:35      1|1:65:20       1|1:100:60
+4      96687409        rs998065        A       G       .       PASS    AA=G;DP=133     GT:GQ:DP        1|1:100:35      1|1:65:20       1|1:100:79
+21     46655271        rs2839243       T       C       .       PASS    AA=C;DP=148     GT:GQ:DP        1|1:100:35      1|1:65:22       1|1:100:92
+14     68292237        rs194725        C       T       .       PASS    AA=T;DP=154     GT:GQ:DP        1|1:100:35      1|1:65:24       1|1:100:51
+5      141327014       rs252137        T       C       .       PASS    AA=C;DP=112     GT:GQ:DP        1|1:100:35      1|1:68:21       1|1:100:56
+11     43241045        rs10734513      G       A       .       PASS    AA=A;DP=125     GT:GQ:DP        1|1:100:35      1|1:68:21       1|1:100:68
+3      69489716        rs1843047       T       C       .       PASS    AA=C;DP=116     GT:GQ:DP        1|1:100:35      1|1:68:22       1|1:100:60
+21     28690450        rs12482953      T       C       .       PASS    AA=C;DP=121     GT:GQ:DP        1|1:100:35      1|1:68:22       1|1:100:64
+4      106693545       rs6533206       T       C       .       PASS    AA=C;DP=129     GT:GQ:DP        1|1:100:35      1|1:68:22       1|1:100:72
+16     8644239 rs1731006       G       T       .       PASS    AA=G;DP=143     GT:GQ:DP        1|1:100:35      1|1:68:22       1|1:100:85
+12     93905833        rs7133992       A       G       .       PASS    AA=A;DP=124     GT:GQ:DP        1|1:100:35      1|1:68:23       1|1:100:68
+1      167794699       rs9332570       C       G       .       PASS    AA=G;DP=123;HM2 GT:GQ:DP        1|1:100:35      1|1:68:27       1|1:100:60
+4      156014018       rs6835574       A       C       .       PASS    AA=A;DP=148     GT:GQ:DP        1|1:100:35      1|1:70:24       1|1:100:87
+13     69491208        rs1441558       T       C       .       PASS    AA=C;DP=114     GT:GQ:DP        1|1:100:35      1|1:71:22       1|1:100:49
+3      50526251        rs58559172      A       T       .       PASS    AA=T;DP=121     GT:GQ:DP        1|1:100:35      1|1:71:22       1|1:100:67
+9      15094772        rs4548273       A       T       .       PASS    AA=T;DP=134     GT:GQ:DP        1|1:100:35      1|1:71:22       1|1:100:77
+22     29195813        rs4820858       A       C       .       PASS    AA=a;DP=137     GT:GQ:DP        1|1:100:35      1|1:71:22       1|1:100:80
+13     39708757        rs1556748       G       C       .       PASS    AA=C;DP=170     GT:GQ:DP        1|1:100:35      1|1:71:24       1|1:100:113
+5      170946941       rs11134707      T       C       .       PASS    AA=T;DP=136     GT:GQ:DP        1|1:100:35      1|1:71:24       1|1:100:78
+8      10247033        rs7818437       T       C       .       PASS    AA=T;DP=125     GT:GQ:DP        1|1:100:35      1|1:72:24       1|1:100:60
+8      90141288        rs1240057       T       C       .       PASS    AA=C;DP=114     GT:GQ:DP        1|1:100:35      1|1:74:23       1|1:100:56
+3      129245944       rs4857834       T       C       .       PASS    AA=C;DP=131     GT:GQ:DP        1|1:100:35      1|1:74:23       1|1:100:68
+2      98817316        rs1514915       G       A       .       PASS    AA=A;DP=126     GT:GQ:DP        1|1:100:35      1|1:74:23       1|1:100:69
+18     5771422 rs4797228       G       C       .       PASS    AA=C;DP=136     GT:GQ:DP        1|1:100:35      1|1:74:23       1|1:100:76
+3      195073939       rs2630237       G       T       .       PASS    AA=G;DP=145     GT:GQ:DP        1|1:100:35      1|1:74:23       1|1:100:90
+5      145367447       rs758038        G       C       .       PASS    AA=C;DP=118     GT:GQ:DP        1|1:100:35      1|1:74:24       1|1:100:58
+14     20599200        rs4982400       G       C       .       PASS    AA=N;DP=123     GT:GQ:DP        1|1:100:35      1|1:74:24       1|1:100:63
+2      225873256       rs10153937      A       G       .       PASS    AA=G;DP=133     GT:GQ:DP        1|1:100:35      1|1:74:30       1|1:100:54
+22     22600033        rs2330638       A       G       .       PASS    AA=a;DP=133     GT:GQ:DP        1|1:100:35      1|1:76:30       1|1:100:67
+11     125898003       rs1892998       T       C       .       PASS    AA=t;DP=130     GT:GQ:DP        1|1:100:35      1|1:77:24       1|1:100:60
+7      140363015       rs246746        G       A       .       PASS    AA=A;DP=124     GT:GQ:DP        1|1:100:35      1|1:77:24       1|1:100:66
+5      124928096       rs331721        C       T       .       PASS    AA=T;DP=146     GT:GQ:DP        1|1:100:35      1|1:77:24       1|1:100:86
+6      3850474 rs9503797       A       G       .       PASS    AA=.;DP=94      GT:GQ:DP        1|1:100:35      1|1:77:25       1|1:100:25
+6      163033492       rs2023041       A       G       .       PASS    AA=G;DP=127     GT:GQ:DP        1|1:100:35      1|1:77:26       1|1:100:66
+12     89510865        rs2520524       T       C       .       PASS    AA=C;DP=141     GT:GQ:DP        1|1:100:35      1|1:77:26       1|1:100:80
+9      126219141       rs10732391      A       G       .       PASS    AA=G;DP=119     GT:GQ:DP        1|1:100:35      1|1:77:27       1|1:100:55
+7      36189604        rs759409        A       G       .       PASS    AA=A;DP=116     GT:GQ:DP        1|1:100:35      1|1:80:25       1|1:100:54
+1      31063935        rs3862889       A       G       .       PASS    AA=G;DP=158;HM3 GT:GQ:DP        1|1:100:35      1|1:80:25       1|1:100:56
+5      125524044       rs3843819       C       T       .       PASS    AA=T;DP=118     GT:GQ:DP        1|1:100:35      1|1:80:25       1|1:100:59
+6      132698326       rs676145        A       G       .       PASS    AA=G;DP=136     GT:GQ:DP        1|1:100:35      1|1:80:25       1|1:100:77
+5      172843191       rs254785        T       A       .       PASS    AA=A;DP=120     GT:GQ:DP        1|1:100:35      1|1:80:26       1|1:100:60
+1      218558335       rs11118519      A       G       .       PASS    AA=G;DP=129;HM2 GT:GQ:DP        1|1:100:35      1|1:80:26       1|1:100:67
+2      79134734        rs369760        G       C       .       PASS    AA=N;DP=140     GT:GQ:DP        1|1:100:35      1|1:80:26       1|1:100:80
+8      27668684        rs1460227       G       A       .       PASS    AA=A;DP=108     GT:GQ:DP        1|1:100:35      1|1:83:26       1|1:100:48
+18     58214321        rs3017365       G       A       .       PASS    AA=G;DP=139     GT:GQ:DP        1|1:100:35      1|1:83:26       1|1:100:78
+14     55449783        rs1952884       T       C       .       PASS    AA=C;DP=153     GT:GQ:DP        1|1:100:35      1|1:83:26       1|1:100:93
+3      21292206        rs7651587       C       T       .       PASS    AA=T;DP=121     GT:GQ:DP        1|1:100:35      1|1:83:27       1|1:100:50
+5      153280765       rs2434221       C       G       .       PASS    AA=G;DP=124     GT:GQ:DP        1|1:100:35      1|1:83:27       1|1:100:63
+9      72730661        rs12340761      A       G       .       PASS    AA=G;DP=116     GT:GQ:DP        1|1:100:35      1|1:86:27       1|1:100:46
+10     58379604        rs12774570      C       T       .       PASS    AA=N;DP=123     GT:GQ:DP        1|1:100:35      1|1:86:27       1|1:100:60
+6      40992717        rs1929789       A       G       .       PASS    AA=G;DP=150     GT:GQ:DP        1|1:100:35      1|1:86:28       1|1:100:75
+4      78361722        rs4859477       A       G       .       PASS    AA=.;DP=142     GT:GQ:DP        1|1:100:35      1|1:86:29       1|1:100:78
+12     129471676       rs4759678       C       T       .       PASS    AA=T;DP=136     GT:GQ:DP        1|1:100:35      1|1:89:28       1|1:100:76
+16     7466567 rs2191384       C       T       .       PASS    AA=T;DP=139     GT:GQ:DP        1|1:100:35      1|1:89:28       1|1:100:81
+11     8118669 rs6578934       G       A       .       PASS    AA=A;DP=145     GT:GQ:DP        1|1:100:35      1|1:89:30       1|1:100:76
+11     79846838        rs2443960       A       G       .       PASS    AA=G;DP=160     GT:GQ:DP        1|1:100:35      1|1:92:29       1|1:100:51
+7      105759338       rs2704955       G       T       .       PASS    AA=T;DP=131     GT:GQ:DP        1|1:100:35      1|1:92:29       1|1:100:67
+8      28050160        rs4732828       T       G       .       PASS    AA=G;DP=132     GT:GQ:DP        1|1:100:35      1|1:92:30       1|1:100:69
+9      19522826        rs10811199      G       T       .       PASS    AA=G;DP=132     GT:GQ:DP        1|1:100:35      1|1:95:30       1|1:100:72
+14     87262008        rs8016627       T       C       .       PASS    AA=C;DP=155     GT:GQ:DP        1|1:100:35      1|1:95:30       1|1:100:85
+8      94961296        rs4236815       A       G       .       PASS    AA=G;DP=119     GT:GQ:DP        1|1:100:35      1|1:98:32       1|1:100:52
+1      182889064       rs6674277       A       G       .       PASS    AA=G;DP=125     GT:GQ:DP        1|1:100:35      1|1:98:32       1|1:100:61
+8      135598106       rs9324515       A       T       .       PASS    AA=T;DP=94      GT:GQ:DP        1|1:100:36      0|0:27:18       1|0:100:37
+12     5583825 rs1558776       G       A       .       PASS    AA=N;DP=152     GT:GQ:DP        1|1:100:36      0|0:48:16       1|0:100:95
+16     57272994        rs7205035       C       T       .       PASS    AA=T;DP=100     GT:GQ:DP        1|1:100:36      0|0:51:17       1|0:100:38
+8      83205126        rs2198630       C       T       .       PASS    AA=C;DP=129     GT:GQ:DP        1|1:100:36      0|0:51:17       1|0:100:80
+16     10109228        rs6497690       G       A       .       PASS    AA=G;DP=142     GT:GQ:DP        1|1:100:36      0|0:51:18       1|0:100:87
+8      29951370        rs28587795      A       G       .       PASS    AA=G;DP=111     GT:GQ:DP        1|1:100:36      0|0:51:19       1|0:100:55
+13     100533212       rs17677552      G       A       .       PASS    AA=G;DP=141     GT:GQ:DP        1|1:100:36      0|0:54:18       1|0:100:86
+6      3274918 rs4285364       A       G       .       PASS    AA=G;DP=150     GT:GQ:DP        1|1:100:36      0|0:54:18       1|0:100:93
+6      21435431        rs9358413       G       A       .       PASS    AA=G;DP=114     GT:GQ:DP        1|1:100:36      0|0:60:22       1|0:100:57
+11     97390956        rs2266138       G       A       .       PASS    AA=G;DP=131     GT:GQ:DP        1|1:100:36      0|0:60:27       1|0:100:70
+15     93465782        rs1458253       C       G       .       PASS    AA=C;DP=128     GT:GQ:DP        1|1:100:36      0|0:63:22       1|0:100:70
+12     81940540        rs17010499      T       G       .       PASS    AA=G;DP=126     GT:GQ:DP        1|1:100:36      0|0:69:23       1|0:100:70
+6      137387329       rs276487        G       C       .       PASS    AA=G;DP=130     GT:GQ:DP        1|1:100:36      0|0:72:25       1|0:100:62
+4      106537259       .       G       C       .       PASS    AA=G;DP=148     GT:GQ:DP        1|1:100:36      0|0:72:25       1|0:100:89
+15     77286184        .       T       C       .       PASS    AA=T;DP=147     GT:GQ:DP        1|1:100:36      0|0:75:25       1|0:100:80
+4      179823108       rs2715482       A       G       .       PASS    AA=A;DP=142     GT:GQ:DP        1|1:100:36      0|0:75:25       1|0:100:81
+5      143401925       rs309340        G       A       .       PASS    AA=G;DP=137     GT:GQ:DP        1|1:100:36      0|0:78:26       1|0:100:76
+17     39178751        rs9899889       T       G       .       PASS    AA=g;DP=128     GT:GQ:DP        1|1:100:36      0|0:81:27       1|0:100:68
+9      4061193 rs10125963      T       C       .       PASS    AA=T;DP=128     GT:GQ:DP        1|1:100:36      0|0:84:28       1|0:100:66
+4      53434613        rs1047959       C       G       .       PASS    AA=C;DP=160     GT:GQ:DP        1|1:100:36      0|0:87:30       1|0:100:92
+17     56665039        rs57165085      G       A       .       PASS    AA=G;DP=154     GT:GQ:DP        1|1:100:36      0|0:88:37       1|0:100:78
+10     43712417        rs7893153       A       G       .       PASS    AA=G;DP=142     GT:GQ:DP        1|1:100:36      0|0:90:30       1|0:100:32
+5      74018721        rs820884        T       C       .       PASS    AA=C;DP=157     GT:GQ:DP        1|1:100:36      0|0:92:40       1|0:100:82
+2      75848851        rs13421024      G       C       .       PASS    AA=C;DP=137     GT:GQ:DP        1|1:100:36      0|1:100:21      1|0:100:78
+6      32680679        rs9270935       A       G       .       PASS    AA=A;DP=136     GT:GQ:DP        1|1:100:36      0|1:100:22      1|0:100:77
+4      170668802       rs6829886       T       C       .       PASS    AA=C;DP=118     GT:GQ:DP        1|1:100:36      0|1:100:23      1|0:100:59
+2      121767837       rs60557260      A       G       .       PASS    AA=A;DP=119     GT:GQ:DP        1|1:100:36      0|1:100:23      1|0:100:62
+10     127766520       rs1278365       C       T       .       PASS    AA=c;DP=125     GT:GQ:DP        1|1:100:36      0|1:100:23      1|0:100:67
+5      131473559       rs154724        A       T       .       PASS    AA=A;DP=142     GT:GQ:DP        1|1:100:36      0|1:100:25      1|0:100:78
+2      66245399        rs2954974       G       C       .       PASS    AA=C;DP=135     GT:GQ:DP        1|1:100:36      0|1:100:26      1|0:100:73
+4      83108509        rs320772        G       A       .       PASS    AA=A;DP=126     GT:GQ:DP        1|1:100:36      0|1:100:27      1|0:100:65
+13     99306665        rs9300569       C       T       .       PASS    AA=T;DP=135     GT:GQ:DP        1|1:100:36      0|1:100:28      1|0:100:71
+2      23081230        rs1374461       A       T       .       PASS    AA=T;DP=144     GT:GQ:DP        1|1:100:36      0|1:100:28      1|0:100:83
+8      28697106        rs241192        G       A       .       PASS    AA=A;DP=153     GT:GQ:DP        1|1:100:36      0|1:100:28      1|0:100:90
+5      136669424       rs2916649       T       C       .       PASS    AA=C;DP=146     GT:GQ:DP        1|1:100:36      0|1:100:29      1|0:100:81
+3      184353130       rs514636        G       A       .       PASS    AA=G;DP=152     GT:GQ:DP        1|1:100:36      0|1:100:29      1|0:100:85
+7      147249862       rs2539001       T       G       .       PASS    AA=T;DP=159     GT:GQ:DP        1|1:100:36      0|1:100:29      1|0:100:93
+10     14473314        rs7094560       T       C       .       PASS    AA=C;DP=139     GT:GQ:DP        1|1:100:36      0|1:100:30      1|0:100:72
+2      187064791       rs4667100       G       T       .       PASS    AA=G;DP=143     GT:GQ:DP        1|1:100:36      0|1:100:30      1|0:100:75
+4      184827744       rs4422454       T       C       .       PASS    AA=C;DP=153     GT:GQ:DP        1|1:100:36      0|1:100:31      1|0:100:86
+8      50006930        rs10100077      A       C       .       PASS    AA=.;DP=149     GT:GQ:DP        1|1:100:36      0|1:100:32      1|0:100:79
+3      13396320        rs7625586       T       C       .       PASS    AA=C;DP=159     GT:GQ:DP        1|1:100:36      0|1:52:31       1|0:100:44
+15     30833582        rs1258740       C       T       .       PASS    AA=T;DP=122     GT:GQ:DP        1|1:100:36      0|1:54:18       1|0:100:69
+22     28106050        rs5763179       T       C       .       PASS    AA=N;DP=141     GT:GQ:DP        1|1:100:36      0|1:63:30       1|0:100:74
+22     33857074        rs134216        A       G       .       PASS    AA=a;DP=115     GT:GQ:DP        1|1:100:36      0|1:65:18       1|0:100:62
+4      154682499       .       C       T       .       PASS    AA=C;DP=138     GT:GQ:DP        1|1:100:36      0|1:69:17       1|0:100:87
+2      65317169        rs7570647       A       G       .       PASS    AA=A;DP=130     GT:GQ:DP        1|1:100:36      0|1:77:27       1|0:100:68
+12     111652751       rs4767000       A       G       .       PASS    AA=N;DP=143     GT:GQ:DP        1|1:100:36      0|1:7:21        1|0:100:88
+20     18100669        rs6081019       A       G       .       PASS    AA=a;DP=123     GT:GQ:DP        1|1:100:36      0|1:97:25       1|0:100:62
+4      45103781        rs4359946       A       T       .       PASS    AA=A;DP=120     GT:GQ:DP        1|1:100:36      1|0:100:17      1|1:100:69
+4      166037058       rs10517818      T       C       .       PASS    AA=C;DP=109     GT:GQ:DP        1|1:100:36      1|0:100:20      1|1:100:43
+9      81329505        rs12553843      C       T       .       PASS    AA=c;DP=115     GT:GQ:DP        1|1:100:36      1|0:100:21      1|1:100:58
+20     51456726        .       G       A       .       PASS    AA=G;DP=137     GT:GQ:DP        1|1:100:36      1|0:100:21      1|1:100:79
+6      148571833       rs885344        G       A       .       PASS    AA=A;DP=127     GT:GQ:DP        1|1:100:36      1|0:100:22      1|1:100:65
+3      190439025       rs7615934       C       T       .       PASS    AA=C;DP=142     GT:GQ:DP        1|1:100:36      1|0:100:22      1|1:100:85
+21     41681003        rs9305742       G       C       .       PASS    AA=C;DP=121     GT:GQ:DP        1|1:100:36      1|0:100:23      1|1:100:61
+2      228824992       rs12694775      C       T       .       PASS    AA=C;DP=125     GT:GQ:DP        1|1:100:36      1|0:100:23      1|1:100:66
+4      42517117        rs11728519      G       A       .       PASS    AA=A;DP=126     GT:GQ:DP        1|1:100:36      1|0:100:23      1|1:100:66
+20     57216649        rs259997        G       A       .       PASS    AA=A;DP=127     GT:GQ:DP        1|1:100:36      1|0:100:23      1|1:100:69
+1      238374012       rs2355833       C       G       .       PASS    AA=G;DP=131;HM2;HM3     GT:GQ:DP        1|1:100:36      1|0:100:23      1|1:100:72
+5      39583900        rs1501699       G       T       .       PASS    AA=G;DP=129     GT:GQ:DP        1|1:100:36      1|0:100:23      1|1:100:72
+5      125035522       rs902596        A       G       .       PASS    AA=G;DP=131     GT:GQ:DP        1|1:100:36      1|0:100:25      1|1:100:69
+1      116536850       rs1884992       T       C       .       PASS    AA=C;DP=119     GT:GQ:DP        1|1:100:36      1|0:100:26      1|1:100:49
+11     84465060        rs633562        C       G       .       PASS    AA=G;DP=148     GT:GQ:DP        1|1:100:36      1|0:100:26      1|1:100:88
+21     25905736        rs762201        A       T       .       PASS    AA=T;DP=155     GT:GQ:DP        1|1:100:36      1|0:100:27      1|1:100:73
+13     46747569        rs7994694       A       G       .       PASS    AA=a;DP=120     GT:GQ:DP        1|1:100:36      1|0:100:28      1|1:100:55
+6      102088501       rs2518262       G       A       .       PASS    AA=A;DP=132     GT:GQ:DP        1|1:100:36      1|0:100:28      1|1:100:69
+13     36506666        rs2093817       G       A       .       PASS    AA=G;DP=136     GT:GQ:DP        1|1:100:36      1|0:100:29      1|1:100:71
+20     23762018        rs4458285       G       C       .       PASS    AA=C;DP=132     GT:GQ:DP        1|1:100:36      1|0:100:30      1|1:100:60
+13     109190926       rs1550040       A       C       .       PASS    AA=C;DP=151     GT:GQ:DP        1|1:100:36      1|0:100:30      1|1:100:85
+20     3551141 rs2753980       A       G       .       PASS    AA=A;DP=131     GT:GQ:DP        1|1:100:36      1|0:100:32      1|1:100:63
+11     87507870        rs7104508       T       A       .       PASS    AA=A;DP=142     GT:GQ:DP        1|1:100:36      1|0:100:32      1|1:100:72
+10     15265356        rs10906851      A       G       .       PASS    AA=a;DP=157     GT:GQ:DP        1|1:100:36      1|0:100:33      1|1:100:85
+21     33505055        rs2834147       T       C       .       PASS    AA=C;DP=155     GT:GQ:DP        1|1:100:36      1|0:100:33      1|1:100:85
+17     50780144        rs1105904       A       C       .       PASS    AA=C;DP=160     GT:GQ:DP        1|1:100:36      1|0:100:36      1|1:100:85
+1      210879497       rs4639826       T       C       .       PASS    AA=C;DP=131;HM2 GT:GQ:DP        1|1:100:36      1|0:44:16       1|1:100:79
+4      44659168        rs28433591      T       C       .       PASS    AA=T;DP=107     GT:GQ:DP        1|1:100:36      1|0:62:15       1|1:100:45
+19     48766052        rs2854510       A       G       .       PASS    AA=G;DP=116     GT:GQ:DP        1|1:100:36      1|0:70:21       1|1:100:60
+13     72626140        rs9600079       G       T       .       PASS    AA=T;DP=109     GT:GQ:DP        1|1:100:36      1|0:89:14       1|1:100:57
+5      42182955        rs1501511       A       G       .       PASS    AA=G;DP=136     GT:GQ:DP        1|1:100:36      1|0:92:22       1|1:100:77
+15     59527439        rs4309347       T       C       .       PASS    AA=C;DP=119     GT:GQ:DP        1|1:100:36      1|0:99:23       1|1:100:60
+18     46922929        rs4245235       C       T       .       PASS    AA=T;DP=125     GT:GQ:DP        1|1:100:36      1|1:100:33      1|1:100:57
+4      75932144        rs982427        T       A       .       PASS    AA=A;DP=133     GT:GQ:DP        1|1:100:36      1|1:100:33      1|1:100:64
+4      165675726       rs4547758       C       T       .       PASS    AA=T;DP=137     GT:GQ:DP        1|1:100:36      1|1:100:35      1|1:100:66
+5      153142587       rs2964026       G       A       .       PASS    AA=G;DP=143     GT:GQ:DP        1|1:100:36      1|1:100:37      1|1:100:75
+6      75450077        rs1591588       T       C       .       PASS    AA=C;DP=116     GT:GQ:DP        1|1:100:36      1|1:18:9        1|1:100:70
+15     91827183        rs10162848      G       A       .       PASS    AA=A;DP=140     GT:GQ:DP        1|1:100:36      1|1:25:14       1|1:100:91
+11     13849020        rs2403701       A       G       .       PASS    AA=G;DP=128     GT:GQ:DP        1|1:100:36      1|1:27:18       1|1:100:76
+10     15015177        rs4237441       T       C       .       PASS    AA=t;DP=105     GT:GQ:DP        1|1:100:36      1|1:29:10       1|1:100:51
+9      91733182        rs10820846      A       G       .       PASS    AA=N;DP=146     GT:GQ:DP        1|1:100:36      1|1:29:19       1|1:100:90
+16     47831489        rs194422        T       G       .       PASS    AA=G;DP=122     GT:GQ:DP        1|1:100:36      1|1:31:14       1|1:100:72
+1      39430909        rs659286        T       C       .       PASS    AA=C;DP=148;HM2;HM3     GT:GQ:DP        1|1:100:36      1|1:32:20       1|1:100:53
+3      66084173        rs28846189      A       G       .       PASS    AA=N;DP=123     GT:GQ:DP        1|1:100:36      1|1:33:24       1|1:100:52
+22     45294919        rs5768878       T       C       .       PASS    AA=T;DP=122     GT:GQ:DP        1|1:100:36      1|1:34:15       1|1:100:71
+11     2001200 rs7119087       G       A       .       PASS    AA=G;DP=140     GT:GQ:DP        1|1:100:36      1|1:38:11       1|1:100:90
+4      5730493 rs6446388       T       C       .       PASS    AA=C;DP=111     GT:GQ:DP        1|1:100:36      1|1:38:13       1|1:100:62
+6      98475951        rs4339469       T       G       .       PASS    AA=G;DP=118     GT:GQ:DP        1|1:100:36      1|1:38:22       1|1:100:63
+4      40092670        rs4476635       G       A       .       PASS    AA=A;DP=105     GT:GQ:DP        1|1:100:36      1|1:41:13       1|1:100:56
+12     1350768 rs11061718      A       G       .       PASS    AA=A;DP=113     GT:GQ:DP        1|1:100:36      1|1:41:13       1|1:100:62
+20     56143937        rs6026066       A       C       .       PASS    AA=C;DP=88      GT:GQ:DP        1|1:100:36      1|1:42:17       1|1:100:33
+5      137291133       rs11242399      A       G       .       PASS    AA=G;DP=113     GT:GQ:DP        1|1:100:36      1|1:43:24       1|1:100:56
+10     359593  rs3132019       T       C       .       PASS    AA=T;DP=127     GT:GQ:DP        1|1:100:36      1|1:45:20       1|1:100:72
+19     36580140        rs2645161       C       T       .       PASS    AA=C;DP=109     GT:GQ:DP        1|1:100:36      1|1:47:14       1|1:100:60
+11     95375740        .       A       G       .       PASS    AA=G;DP=113     GT:GQ:DP        1|1:100:36      1|1:47:14       1|1:100:66
+19     49641009        rs2571166       A       G       .       PASS    AA=G;DP=138     GT:GQ:DP        1|1:100:36      1|1:47:14       1|1:100:83
+22     19118969        rs2108746       A       G       .       PASS    AA=G;DP=103     GT:GQ:DP        1|1:100:36      1|1:47:16       1|1:100:43
+2      231338938       rs10176502      C       T       .       PASS    AA=T;DP=155     GT:GQ:DP        1|1:100:36      1|1:47:22       1|1:100:51
+18     66074582        rs8089197       C       G       .       PASS    AA=G;DP=139     GT:GQ:DP        1|1:100:36      1|1:50:25       1|1:100:77
+16     9235145 rs7405177       A       G       .       PASS    AA=G;DP=122     GT:GQ:DP        1|1:100:36      1|1:53:16       1|1:100:67
+10     5566656 rs4242798       C       T       .       PASS    AA=T;DP=124     GT:GQ:DP        1|1:100:36      1|1:53:16       1|1:100:68
+1      156833149       rs857712        G       C       .       PASS    AA=C;DP=112     GT:GQ:DP        1|1:100:36      1|1:53:17       1|1:100:59
+6      156908574       rs11156113      T       C       .       PASS    AA=C;DP=135     GT:GQ:DP        1|1:100:36      1|1:53:17       1|1:100:81
+10     30074992        rs1752590       G       C       .       PASS    AA=C;DP=124     GT:GQ:DP        1|1:100:36      1|1:56:17       1|1:100:70
+2      235347860       rs13403639      C       T       .       PASS    AA=C;DP=133     GT:GQ:DP        1|1:100:36      1|1:56:17       1|1:100:78
+3      192452424       rs9985458       C       G       .       PASS    AA=N;DP=99      GT:GQ:DP        1|1:100:36      1|1:56:18       1|1:100:45
+15     62066608        rs1037847       T       C       .       PASS    AA=t;DP=106     GT:GQ:DP        1|1:100:36      1|1:56:19       1|1:100:42
+17     5100256 rs9913167       T       C       .       PASS    AA=C;DP=120     GT:GQ:DP        1|1:100:36      1|1:56:19       1|1:100:65
+18     55313701        rs11876608      A       T       .       PASS    AA=a;DP=123     GT:GQ:DP        1|1:100:36      1|1:56:19       1|1:100:69
+3      135652333       rs1498722       T       C       .       PASS    AA=C;DP=106     GT:GQ:DP        1|1:100:36      1|1:59:18       1|1:100:41
+19     15815058        rs2040855       G       T       .       PASS    AA=t;DP=108     GT:GQ:DP        1|1:100:36      1|1:59:18       1|1:100:51
+14     72317488        rs758914        T       A       .       PASS    AA=A;DP=118     GT:GQ:DP        1|1:100:36      1|1:59:19       1|1:100:64
+15     55762734        rs2733612       C       T       .       PASS    AA=T;DP=146     GT:GQ:DP        1|1:100:36      1|1:59:20       1|1:100:91
+10     14177295        rs789763        G       T       .       PASS    AA=T;DP=111     GT:GQ:DP        1|1:100:36      1|1:59:24       1|1:100:51
+8      17500375        rs2588138       T       G       .       PASS    AA=G;DP=122     GT:GQ:DP        1|1:100:36      1|1:59:25       1|1:100:48
+12     106796477       rs7965884       T       A       .       PASS    AA=A;DP=146     GT:GQ:DP        1|1:100:36      1|1:62:19       1|1:100:83
+22     31804789        rs4821119       C       G       .       PASS    AA=G;DP=127     GT:GQ:DP        1|1:100:36      1|1:62:20       1|1:100:71
+15     78520886        rs3901895       G       C       .       PASS    AA=C;DP=107     GT:GQ:DP        1|1:100:36      1|1:62:21       1|1:100:39
+8      96651913        rs1604258       C       T       .       PASS    AA=T;DP=117     GT:GQ:DP        1|1:100:36      1|1:63:25       1|1:100:53
+7      48634183        rs3915483       C       T       .       PASS    AA=T;DP=136     GT:GQ:DP        1|1:100:36      1|1:63:31       1|1:100:70
+17     53916941        rs1468540       C       T       .       PASS    AA=C;DP=102     GT:GQ:DP        1|1:100:36      1|1:65:20       1|1:100:46
+2      45789953        rs9309128       T       C       .       PASS    AA=C;DP=121     GT:GQ:DP        1|1:100:36      1|1:65:20       1|1:100:52
+4      79608487        rs4975123       C       G       .       PASS    AA=G;DP=115     GT:GQ:DP        1|1:100:36      1|1:65:21       1|1:100:55
+3      27477408        rs6786549       A       T       .       PASS    AA=T;DP=117     GT:GQ:DP        1|1:100:36      1|1:65:21       1|1:100:62
+4      38537251        rs55981540      T       C       .       PASS    AA=C;DP=137     GT:GQ:DP        1|1:100:36      1|1:65:22       1|1:100:79
+16     10912050        rs7204799       C       G       .       PASS    AA=G;DP=131     GT:GQ:DP        1|1:100:36      1|1:65:28       1|1:100:67
+1      18947812        rs851114        A       G       .       PASS    AA=G;DP=139;HM2 GT:GQ:DP        1|1:100:36      1|1:66:28       1|1:100:77
+8      139602549       rs1040247       G       A       .       PASS    AA=G;DP=143     GT:GQ:DP        1|1:100:36      1|1:68:21       1|1:100:46
+18     52295901        rs1848074       G       A       .       PASS    AA=G;DP=113     GT:GQ:DP        1|1:100:36      1|1:68:21       1|1:100:56
+6      164590547       rs9295259       C       A       .       PASS    AA=A;DP=114     GT:GQ:DP        1|1:100:36      1|1:68:21       1|1:100:59
+8      97364853        rs6987316       T       G       .       PASS    AA=G;DP=140     GT:GQ:DP        1|1:100:36      1|1:68:21       1|1:100:83
+18     770322  rs7237758       A       G       .       PASS    AA=G;DP=121     GT:GQ:DP        1|1:100:36      1|1:68:22       1|1:100:52
+6      40752247        rs10947909      G       A       .       PASS    AA=A;DP=122     GT:GQ:DP        1|1:100:36      1|1:68:22       1|1:100:66
+16     51677263        rs2160795       T       C       .       PASS    AA=C;DP=131     GT:GQ:DP        1|1:100:36      1|1:68:22       1|1:100:75
+14     55245387        rs7147303       C       T       .       PASS    AA=T;DP=140     GT:GQ:DP        1|1:100:36      1|1:68:23       1|1:100:82
+11     114606777       rs10790068      C       T       .       PASS    AA=T;DP=147     GT:GQ:DP        1|1:100:36      1|1:68:26       1|1:100:83
+11     36115270        rs867718        G       T       .       PASS    AA=T;DP=142     GT:GQ:DP        1|1:100:36      1|1:69:33       1|1:100:73
+5      156731558       rs2441013       C       T       .       PASS    AA=T;DP=110     GT:GQ:DP        1|1:100:36      1|1:71:22       1|1:100:51
+3      134231480       rs3953092       C       G       .       PASS    AA=G;DP=123     GT:GQ:DP        1|1:100:36      1|1:71:22       1|1:100:65
+15     48375807        rs6493425       A       G       .       PASS    AA=G;DP=119     GT:GQ:DP        1|1:100:36      1|1:71:23       1|1:100:57
+10     53779550        rs11001721      A       G       .       PASS    AA=G;DP=133     GT:GQ:DP        1|1:100:36      1|1:71:23       1|1:100:72
+5      148277460       rs10058725      C       A       .       PASS    AA=A;DP=133     GT:GQ:DP        1|1:100:36      1|1:71:23       1|1:100:75
+3      102432532       rs348867        G       A       .       PASS    AA=A;DP=156     GT:GQ:DP        1|1:100:36      1|1:71:23       1|1:100:84
+16     77796467        rs442608        T       C       .       PASS    AA=C;DP=120     GT:GQ:DP        1|1:100:36      1|1:71:24       1|1:100:61
+1      240730525       rs2809988       A       G       .       PASS    AA=G;DP=139;HM2;HM3     GT:GQ:DP        1|1:100:36      1|1:71:25       1|1:100:80
+3      187925527       rs1656921       G       C       .       PASS    AA=G;DP=159     GT:GQ:DP        1|1:100:36      1|1:71:26       1|1:100:55
+6      16102840        rs4422610       A       G       .       PASS    AA=C;DP=139     GT:GQ:DP        1|1:100:36      1|1:74:23       1|1:100:82
+20     52115926        rs465156        T       C       .       PASS    AA=C;DP=142     GT:GQ:DP        1|1:100:36      1|1:74:23       1|1:100:85
+1      82452744        rs695973        T       A       .       PASS    AA=A;DP=122;HM2 GT:GQ:DP        1|1:100:36      1|1:74:24       1|1:100:65
+1      157271659       rs947275        A       G       .       PASS    AA=A;DP=141;HM2;HM3     GT:GQ:DP        1|1:100:36      1|1:74:25       1|1:100:81
+6      31454172        rs2507982       G       A       .       PASS    AA=a;DP=164     GT:GQ:DP        1|1:100:36      1|1:74:26       1|1:100:103
+17     36582223        rs550804        A       G       .       PASS    AA=.;DP=126     GT:GQ:DP        1|1:100:36      1|1:77:24       1|1:100:66
+15     60822226        rs9806385       A       G       .       PASS    AA=G;DP=136     GT:GQ:DP        1|1:100:36      1|1:77:24       1|1:100:71
+15     61361196        rs1472500       G       T       .       PASS    AA=T;DP=123     GT:GQ:DP        1|1:100:36      1|1:77:26       1|1:100:61
+2      45070210        rs2922011       A       G       .       PASS    AA=G;DP=150     GT:GQ:DP        1|1:100:36      1|1:80:25       1|1:100:42
+7      96934617        rs1003620       C       A       .       PASS    AA=A;DP=121     GT:GQ:DP        1|1:100:36      1|1:80:25       1|1:100:60
+22     15720906        rs165790        T       C       .       PASS    AA=.;DP=133     GT:GQ:DP        1|1:100:36      1|1:80:25       1|1:100:71
+10     5380759 rs10752010      G       A       .       PASS    AA=A;DP=134     GT:GQ:DP        1|1:100:36      1|1:80:25       1|1:100:75
+14     74812312        rs9323607       G       T       .       PASS    AA=T;DP=140     GT:GQ:DP        1|1:100:36      1|1:80:25       1|1:100:81
+5      12352355        rs13156488      G       A       .       PASS    AA=G;DP=143     GT:GQ:DP        1|1:100:36      1|1:80:25       1|1:100:81
+12     6026738 rs216298        C       T       .       PASS    AA=c;DP=149     GT:GQ:DP        1|1:100:36      1|1:80:25       1|1:100:92
+14     29594149        rs225946        T       A       .       PASS    AA=A;DP=116     GT:GQ:DP        1|1:100:36      1|1:80:26       1|1:100:52
+21     18451067        rs60735545      G       T       .       PASS    AA=T;DP=149     GT:GQ:DP        1|1:100:36      1|1:82:30       1|1:100:86
+20     49134809        rs1358784       A       G       .       PASS    AA=G;DP=132     GT:GQ:DP        1|1:100:36      1|1:83:26       1|1:100:71
+7      155310502       rs288764        T       C       .       PASS    AA=C;DP=139     GT:GQ:DP        1|1:100:36      1|1:83:27       1|1:100:76
+7      31495431        rs12673707      A       G       .       PASS    AA=G;DP=135     GT:GQ:DP        1|1:100:36      1|1:86:27       1|1:100:71
+19     6925218 rs252574        G       A       .       PASS    AA=A;DP=134     GT:GQ:DP        1|1:100:36      1|1:86:27       1|1:100:72
+4      9540060 rs881971        T       C       .       PASS    AA=C;DP=148     GT:GQ:DP        1|1:100:36      1|1:86:29       1|1:100:83
+14     33191898        rs4246978       G       A       .       PASS    AA=A;DP=130     GT:GQ:DP        1|1:100:36      1|1:89:28       1|1:100:66
+5      159097899       rs31970 A       G       .       PASS    AA=G;DP=137     GT:GQ:DP        1|1:100:36      1|1:89:28       1|1:100:73
+12     37224729        rs2653775       T       C       .       PASS    AA=C;DP=139     GT:GQ:DP        1|1:100:36      1|1:89:28       1|1:100:76
+16     54256011        rs17307291      G       A       .       PASS    AA=A;DP=140     GT:GQ:DP        1|1:100:36      1|1:89:28       1|1:100:76
+1      15097990        rs2807553       C       T       .       PASS    AA=T;DP=165;HM2 GT:GQ:DP        1|1:100:36      1|1:89:29       1|1:100:90
+5      58270406        rs1677427       C       T       .       PASS    AA=T;DP=146     GT:GQ:DP        1|1:100:36      1|1:92:29       1|1:100:82
+3      41560623        rs1795341       T       C       .       PASS    AA=C;DP=134     GT:GQ:DP        1|1:100:36      1|1:92:32       1|1:100:70
+7      147786531       rs2429231       G       T       .       PASS    AA=G;DP=139     GT:GQ:DP        1|1:100:36      1|1:95:30       1|1:100:75
+12     49187420        rs4259895       G       A       .       PASS    AA=A;DP=160     GT:GQ:DP        1|1:100:36      1|1:95:31       1|1:100:40
+2      181682944       rs10204666      C       A       .       PASS    AA=A;DP=135     GT:GQ:DP        1|1:100:36      1|1:98:31       1|1:100:68
+17     22633224        rs4794872       G       C       .       PASS    AA=C;DP=149     GT:GQ:DP        1|1:100:36      1|1:98:32       1|1:100:81
+7      25171153        rs2523063       C       T       .       PASS    AA=C;DP=148     GT:GQ:DP        1|1:100:37      0|0:100:40      1|0:100:75
+5      134505973       rs7703385       G       C       .       PASS    AA=C;DP=107     GT:GQ:DP        1|1:100:37      0|0:12:18       1|0:100:36
+6      36726118        rs6457932       T       C       .       PASS    AA=C;DP=125     GT:GQ:DP        1|1:100:37      0|0:32:17       1|0:100:66
+3      62861831        rs4234672       G       A       .       PASS    AA=G;DP=155     GT:GQ:DP        1|1:100:37      0|0:38:28       1|0:100:91
+1      240679043       rs2654871       G       A       .       PASS    AA=A;DP=111;HM2 GT:GQ:DP        1|1:100:37      0|0:48:16       1|0:100:58
+6      47137204        rs1226533       C       G       .       PASS    AA=C;DP=123     GT:GQ:DP        1|1:100:37      0|0:48:20       1|0:100:53
+13     27298100        rs944490        G       A       .       PASS    AA=G;DP=129     GT:GQ:DP        1|1:100:37      0|0:54:18       1|0:100:74
+12     115583780       rs754955        G       A       .       PASS    AA=G;DP=145     GT:GQ:DP        1|1:100:37      0|0:60:21       1|0:100:90
+12     101642969       rs11111353      T       C       .       PASS    AA=T;DP=120     GT:GQ:DP        1|1:100:37      0|0:63:22       1|0:100:51
+3      98002149        rs6793203       A       G       .       PASS    AA=A;DP=120     GT:GQ:DP        1|1:100:37      0|0:63:22       1|0:100:61
+19     49309332        rs8111562       G       T       .       PASS    AA=G;DP=116     GT:GQ:DP        1|1:100:37      0|0:66:22       1|0:100:53
+16     13054185        rs4781387       G       A       .       PASS    AA=g;DP=162     GT:GQ:DP        1|1:100:37      0|0:69:23       1|0:100:59
+5      58392657        rs10068543      A       G       .       PASS    AA=A;DP=135     GT:GQ:DP        1|1:100:37      0|0:69:25       1|0:100:74
+10     1612498 rs9663299       C       T       .       PASS    AA=c;DP=148     GT:GQ:DP        1|1:100:37      0|0:69:31       1|0:100:78
+3      185250834       rs11918545      T       C       .       PASS    AA=T;DP=151     GT:GQ:DP        1|1:100:37      0|0:81:27       1|0:100:88
+9      14455710        rs913412        G       A       .       PASS    AA=G;DP=153     GT:GQ:DP        1|1:100:37      0|0:81:27       1|0:100:90
+4      152380599       rs12500223      T       G       .       PASS    AA=G;DP=134     GT:GQ:DP        1|1:100:37      0|0:84:28       1|0:100:69
+16     57137714        rs2241570       T       C       .       PASS    AA=T;DP=140     GT:GQ:DP        1|1:100:37      0|0:84:28       1|0:100:74
+12     104796070       rs2374555       G       A       .       PASS    AA=A;DP=150     GT:GQ:DP        1|1:100:37      0|0:87:32       1|0:100:66
+9      81491726        rs1316822       G       A       .       PASS    AA=A;DP=134     GT:GQ:DP        1|1:100:37      0|0:93:33       1|0:100:63
+11     124797278       rs11220061      C       A       .       PASS    AA=A;DP=131     GT:GQ:DP        1|1:100:37      0|1:100:12      1|0:100:86
+20     52655678        rs4811509       T       C       .       PASS    AA=T;DP=133     GT:GQ:DP        1|1:100:37      0|1:100:16      1|0:100:78
+19     8409574 rs11259981      A       G       .       PASS    AA=G;DP=134     GT:GQ:DP        1|1:100:37      0|1:100:17      1|0:100:80
+6      148382648       rs9403915       C       T       .       PASS    AA=T;DP=132     GT:GQ:DP        1|1:100:37      0|1:100:18      1|0:100:78
+3      44959307        rs4683012       C       A       .       PASS    AA=A;DP=129     GT:GQ:DP        1|1:100:37      0|1:100:19      1|0:100:72
+3      39254156        rs3914286       G       A       .       PASS    AA=A;DP=135     GT:GQ:DP        1|1:100:37      0|1:100:21      1|0:100:75
+8      98433804        rs2679764       A       G       .       PASS    AA=G;DP=140     GT:GQ:DP        1|1:100:37      0|1:100:21      1|0:100:83
+15     79828354        rs7494978       A       G       .       PASS    AA=G;DP=125     GT:GQ:DP        1|1:100:37      0|1:100:23      1|0:100:64
+5      108662456       rs59082257      C       T       .       PASS    AA=T;DP=132     GT:GQ:DP        1|1:100:37      0|1:100:24      1|0:100:71
+1      37054967        rs567658        T       C       .       PASS    AA=C;DP=151     GT:GQ:DP        1|1:100:37      0|1:100:26      1|0:100:91
+19     49689712        rs4803714       C       T       .       PASS    AA=c;DP=138     GT:GQ:DP        1|1:100:37      0|1:100:28      1|0:100:74
+8      115827088       .       A       G       .       PASS    AA=A;DP=147     GT:GQ:DP        1|1:100:37      0|1:100:28      1|0:100:82
+8      12814377        rs2017656       G       A       .       PASS    AA=A;DP=157     GT:GQ:DP        1|1:100:37      0|1:100:29      1|0:100:88
+22     29142549        rs5997642       C       G       .       PASS    AA=G;DP=168     GT:GQ:DP        1|1:100:37      0|1:100:31      1|0:100:56
+7      8058401 rs17568389      T       A       .       PASS    AA=T;DP=135     GT:GQ:DP        1|1:100:37      0|1:100:31      1|0:100:60
+6      31373518        rs3905495       G       A       .       PASS    AA=a;DP=146     GT:GQ:DP        1|1:100:37      0|1:100:31      1|0:100:74
+12     130456784       rs10848372      C       T       .       PASS    AA=C;DP=130     GT:GQ:DP        1|1:100:37      0|1:100:36      1|0:100:56
+19     49144775        rs384432        A       G       .       PASS    AA=G;DP=150     GT:GQ:DP        1|1:100:37      0|1:24:18       1|0:100:86
+3      136618130       rs711956        C       G       .       PASS    AA=G;DP=105     GT:GQ:DP        1|1:100:37      0|1:62:16       1|0:100:52
+9      21108747        rs2800316       A       G       .       PASS    AA=G;DP=113     GT:GQ:DP        1|1:100:37      0|1:70:19       1|0:100:57
+4      52966991        rs7685146       A       G       .       PASS    AA=G;DP=121     GT:GQ:DP        1|1:100:37      0|1:72:23       1|0:100:65
+1      224005015       rs2615068       G       A       .       PASS    AA=A;DP=135     GT:GQ:DP        1|1:100:37      0|1:74:22       1|0:100:76
+2      5869278 rs6432339       G       A       .       PASS    AA=G;DP=124     GT:GQ:DP        1|1:100:37      0|1:85:25       1|0:100:63
+1      53819735        rs3006883       C       T       .       PASS    AA=T;DP=143;HM2;HM3     GT:GQ:DP        1|1:100:37      1|0:100:20      1|1:100:85
+15     96866859        rs4627321       G       C       .       PASS    AA=C;DP=130     GT:GQ:DP        1|1:100:37      1|0:100:21      1|1:100:72
+20     44544341        rs461863        G       A       .       PASS    AA=A;DP=104     GT:GQ:DP        1|1:100:37      1|0:100:22      1|1:100:34
+8      10019264        rs17689674      C       A       .       PASS    AA=A;DP=124     GT:GQ:DP        1|1:100:37      1|0:100:22      1|1:100:65
+10     1469767 rs2387675       C       T       .       PASS    AA=T;DP=112     GT:GQ:DP        1|1:100:37      1|0:100:23      1|1:100:41
+1      57987244        rs10889070      G       A       .       PASS    AA=A;DP=138;HM2;HM3     GT:GQ:DP        1|1:100:37      1|0:100:23      1|1:100:75
+15     41908862        rs2930531       G       A       .       PASS    AA=A;DP=142     GT:GQ:DP        1|1:100:37      1|0:100:23      1|1:100:86
+11     31805806        rs1806162       C       G       .       PASS    AA=G;DP=114     GT:GQ:DP        1|1:100:37      1|0:100:24      1|1:100:54
+11     69864262        rs3900797       C       T       .       PASS    AA=C;DP=152     GT:GQ:DP        1|1:100:37      1|0:100:26      1|1:100:50
+17     58292916        rs8081798       G       A       .       PASS    AA=G;DP=133     GT:GQ:DP        1|1:100:37      1|0:100:26      1|1:100:58
+9      71792786        rs17443354      A       G       .       PASS    AA=G;DP=135     GT:GQ:DP        1|1:100:37      1|0:100:26      1|1:100:71
+3      173516965       rs9837821       T       C       .       PASS    AA=C;DP=138     GT:GQ:DP        1|1:100:37      1|0:100:26      1|1:100:73
+12     2689370 rs1362642       C       T       .       PASS    AA=C;DP=111     GT:GQ:DP        1|1:100:37      1|0:100:27      1|1:100:47
+10     6088024 rs1408014       T       C       .       PASS    AA=t;DP=153     GT:GQ:DP        1|1:100:37      1|0:100:27      1|1:100:88
+13     54629370        rs1582146       C       G       .       PASS    AA=G;DP=136     GT:GQ:DP        1|1:100:37      1|0:100:28      1|1:100:70
+3      98193141        rs1547399       C       T       .       PASS    AA=T;DP=136     GT:GQ:DP        1|1:100:37      1|0:100:29      1|1:100:67
+3      179468089       rs4857763       T       C       .       PASS    AA=C;DP=133     GT:GQ:DP        1|1:100:37      1|0:100:29      1|1:100:68
+2      46256003        rs13405491      T       C       .       PASS    AA=T;DP=139     GT:GQ:DP        1|1:100:37      1|0:100:29      1|1:100:70
+17     4546649 rs9897243       C       T       .       PASS    AA=T;DP=152     GT:GQ:DP        1|1:100:37      1|0:100:30      1|1:100:85
+10     53024581        rs1917842       G       A       .       PASS    AA=A;DP=112     GT:GQ:DP        1|1:100:37      1|0:100:34      1|1:100:35
+7      121006784       rs17143550      A       T       .       PASS    AA=T;DP=147     GT:GQ:DP        1|1:100:37      1|0:38:26       1|1:100:86
+20     48304728        rs2151573       C       T       .       PASS    AA=T;DP=109     GT:GQ:DP        1|1:100:37      1|0:51:25       1|1:100:47
+10     108920294       rs2485206       C       T       .       PASS    AA=T;DP=131     GT:GQ:DP        1|1:100:37      1|0:67:22       1|1:100:71
+7      150876967       rs1029949       C       G       .       PASS    AA=G;DP=114     GT:GQ:DP        1|1:100:37      1|0:68:19       1|1:100:59
+11     72042053        rs184654        C       G       .       PASS    AA=C;DP=157     GT:GQ:DP        1|1:100:37      1|0:69:21       1|1:100:53
+8      12932971        rs28431407      G       A       .       PASS    AA=G;DP=135     GT:GQ:DP        1|1:100:37      1|0:85:22       1|1:100:76
+3      172609064       rs12631909      G       A       .       PASS    AA=G;DP=150     GT:GQ:DP        1|1:100:37      1|0:87:25       1|1:100:90
+1      175948295       rs911965        A       G       .       PASS    AA=G;DP=122;HM2;HM3     GT:GQ:DP        1|1:100:37      1|0:90:17       1|1:100:67
+2      235482384       rs1559983       T       C       .       PASS    AA=t;DP=117     GT:GQ:DP        1|1:100:37      1|0:92:18       1|1:100:64
+6      106265106       rs1508369       G       A       .       PASS    AA=g;DP=121     GT:GQ:DP        1|1:100:37      1|0:92:26       1|1:100:58
+2      73933667        rs6722659       T       C       .       PASS    AA=t;DP=118     GT:GQ:DP        1|1:100:37      1|0:94:19       1|1:100:62
+7      24037520        rs2194483       G       A       .       PASS    AA=N;DP=164     GT:GQ:DP        1|1:100:37      1|1:100:34      1|1:100:92
+20     19365070        rs6081598       T       C       .       PASS    AA=C;DP=163     GT:GQ:DP        1|1:100:37      1|1:100:35      1|1:100:84
+12     66305815        rs1797717       G       A       .       PASS    AA=G;DP=127     GT:GQ:DP        1|1:100:37      1|1:100:36      1|1:100:52
+13     26287892        rs1359909       T       C       .       PASS    AA=C;DP=160     GT:GQ:DP        1|1:100:37      1|1:100:38      1|1:100:85
+6      31423519        rs9265963       A       G       .       PASS    AA=N;DP=151     GT:GQ:DP        1|1:100:37      1|1:100:39      1|1:100:75
+6      57689866        rs7758698       T       C       .       PASS    AA=C;DP=160     GT:GQ:DP        1|1:100:37      1|1:100:41      1|1:100:35
+22     48116121        rs848746        G       T       .       PASS    AA=t;DP=104     GT:GQ:DP        1|1:100:37      1|1:27:16       1|1:100:52
+16     84103118        rs4783226       C       T       .       PASS    AA=T;DP=125     GT:GQ:DP        1|1:100:37      1|1:29:19       1|1:100:54
+15     72983481        rs4886637       A       C       .       PASS    AA=C;DP=139     GT:GQ:DP        1|1:100:37      1|1:29:19       1|1:100:85
+9      105567819       rs10820545      G       T       .       PASS    AA=G;DP=115     GT:GQ:DP        1|1:100:37      1|1:32:20       1|1:100:58
+17     40411244        rs8077267       T       C       .       PASS    AA=C;DP=111     GT:GQ:DP        1|1:100:37      1|1:41:12       1|1:100:49
+6      14924490        rs233484        C       A       .       PASS    AA=C;DP=121     GT:GQ:DP        1|1:100:37      1|1:43:20       1|1:100:65
+16     23820535        rs6497698       T       C       .       PASS    AA=C;DP=154     GT:GQ:DP        1|1:100:37      1|1:45:28       1|1:100:89
+12     53317585        rs2030408       G       A       .       PASS    AA=G;DP=153     GT:GQ:DP        1|1:100:37      1|1:46:25       1|1:100:92
+1      205849554       rs6691117       A       G       .       PASS    AA=G;DP=117;HM2;HM3     GT:GQ:DP        1|1:100:37      1|1:47:14       1|1:100:67
+6      139928335       rs7740339       A       G       .       PASS    AA=G;DP=126     GT:GQ:DP        1|1:100:37      1|1:47:14       1|1:100:71
+20     37641070        rs6016114       T       C       .       PASS    AA=C;DP=124     GT:GQ:DP        1|1:100:37      1|1:47:14       1|1:100:73
+10     84011724        rs11591542      T       C       .       PASS    AA=C;DP=111     GT:GQ:DP        1|1:100:37      1|1:50:15       1|1:100:60
+13     64016118        rs9540147       T       C       .       PASS    AA=C;DP=95      GT:GQ:DP        1|1:100:37      1|1:53:16       1|1:100:41
+22     47170067        rs35241317      T       C       .       PASS    AA=N;DP=120     GT:GQ:DP        1|1:100:37      1|1:53:16       1|1:100:69
+8      128908991       rs10956391      G       T       .       PASS    AA=G;DP=147     GT:GQ:DP        1|1:100:37      1|1:53:16       1|1:100:93
+5      65977727        rs17269660      C       G       .       PASS    AA=G;DP=98      GT:GQ:DP        1|1:100:37      1|1:53:17       1|1:100:45
+5      123402020       rs6892159       C       G       .       PASS    AA=G;DP=118     GT:GQ:DP        1|1:100:37      1|1:53:17       1|1:100:62
+15     93501509        rs188324        G       A       .       PASS    AA=A;DP=140     GT:GQ:DP        1|1:100:37      1|1:55:28       1|1:100:72
+2      15839739        rs2693019       T       C       .       PASS    AA=C;DP=141     GT:GQ:DP        1|1:100:37      1|1:55:28       1|1:100:74
+21     16945053        rs2823935       G       C       .       PASS    AA=G;DP=114     GT:GQ:DP        1|1:100:37      1|1:56:17       1|1:100:59
+22     48186471        rs136772        G       A       .       PASS    AA=A;DP=138     GT:GQ:DP        1|1:100:37      1|1:56:18       1|1:100:86
+8      136290117       rs1564470       C       A       .       PASS    AA=C;DP=125     GT:GQ:DP        1|1:100:37      1|1:57:18       1|1:100:70
+2      25003800        rs10182181      A       G       .       PASS    AA=G;DP=166     GT:GQ:DP        1|1:100:37      1|1:57:24       1|1:100:65
+6      1676691 rs1013064       A       G       .       PASS    AA=a;DP=115     GT:GQ:DP        1|1:100:37      1|1:59:18       1|1:100:56
+20     45168105        rs6066200       A       G       .       PASS    AA=G;DP=122     GT:GQ:DP        1|1:100:37      1|1:59:18       1|1:100:66
+12     8654077 rs1561561       C       G       .       PASS    AA=G;DP=124     GT:GQ:DP        1|1:100:37      1|1:59:18       1|1:100:68
+2      223035661       rs12470721      C       T       .       PASS    AA=G;DP=129     GT:GQ:DP        1|1:100:37      1|1:59:19       1|1:100:72
+3      119559194       rs1696504       A       G       .       PASS    AA=A;DP=128     GT:GQ:DP        1|1:100:37      1|1:59:20       1|1:100:75
+10     21043718        rs2031511       T       C       .       PASS    AA=C;DP=141     GT:GQ:DP        1|1:100:37      1|1:60:30       1|1:100:75
+6      31458854        rs2523487       T       C       .       PASS    AA=N;DP=108     GT:GQ:DP        1|1:100:37      1|1:62:19       1|1:100:52
+14     98445074        rs200354        G       T       .       PASS    AA=G;DP=112     GT:GQ:DP        1|1:100:37      1|1:62:19       1|1:100:57
+5      98446643        rs6596681       A       G       .       PASS    AA=C;DP=121     GT:GQ:DP        1|1:100:37      1|1:62:19       1|1:100:63
+3      113539104       rs7619941       A       G       .       PASS    AA=G;DP=123     GT:GQ:DP        1|1:100:37      1|1:62:19       1|1:100:70
+9      33920943        rs307644        A       G       .       PASS    AA=G;DP=134     GT:GQ:DP        1|1:100:37      1|1:62:20       1|1:100:77
+11     60351843        rs658543        A       G       .       PASS    AA=N;DP=133     GT:GQ:DP        1|1:100:37      1|1:62:22       1|1:100:74
+1      37474628        rs1354110       A       G       .       PASS    AA=G;DP=124;HM2 GT:GQ:DP        1|1:100:37      1|1:64:25       1|1:100:62
+12     27847108        rs9029  C       G       .       PASS    AA=G;DP=105     GT:GQ:DP        1|1:100:37      1|1:65:20       1|1:100:48
+7      16514072        rs55881050      T       C       .       PASS    AA=C;DP=125     GT:GQ:DP        1|1:100:37      1|1:65:20       1|1:100:68
+8      130500030       rs1432360       T       C       .       PASS    AA=T;DP=100     GT:GQ:DP        1|1:100:37      1|1:65:21       1|1:100:35
+6      19000997        rs1334783       A       G       .       PASS    AA=G;DP=119     GT:GQ:DP        1|1:100:37      1|1:65:21       1|1:100:50
+3      179245874       rs7613269       C       T       .       PASS    AA=T;DP=106     GT:GQ:DP        1|1:100:37      1|1:65:21       1|1:100:51
+1      118159751       rs4659061       T       C       .       PASS    AA=T;DP=135     GT:GQ:DP        1|1:100:37      1|1:65:21       1|1:100:78
+7      37530236        rs10249828      T       C       .       PASS    AA=C;DP=148     GT:GQ:DP        1|1:100:37      1|1:65:21       1|1:100:90
+17     52674223        rs3916160       T       C       .       PASS    AA=C;DP=129     GT:GQ:DP        1|1:100:37      1|1:66:26       1|1:100:67
+17     62430855        rs719934        G       A       .       PASS    AA=A;DP=146     GT:GQ:DP        1|1:100:37      1|1:66:32       1|1:100:77
+10     115754080       rs678223        T       G       .       PASS    AA=T;DP=132     GT:GQ:DP        1|1:100:37      1|1:67:26       1|1:100:71
+2      190523456       rs6434373       G       A       .       PASS    AA=g;DP=121     GT:GQ:DP        1|1:100:37      1|1:68:21       1|1:100:64
+4      88672655        rs12501773      A       C       .       PASS    AA=C;DP=125     GT:GQ:DP        1|1:100:37      1|1:68:21       1|1:100:66
+2      197774560       rs2697317       C       T       .       PASS    AA=T;DP=137     GT:GQ:DP        1|1:100:37      1|1:68:21       1|1:100:81
+1      177835452       rs4652423       A       G       .       PASS    AA=G;DP=138     GT:GQ:DP        1|1:100:37      1|1:68:23       1|1:100:74
+4      179737507       rs2715546       C       T       .       PASS    AA=T;DP=140     GT:GQ:DP        1|1:100:37      1|1:68:25       1|1:100:65
+3      157580192       rs7613469       C       A       .       PASS    AA=A;DP=132     GT:GQ:DP        1|1:100:37      1|1:71:22       1|1:100:75
+15     84902982        rs2437785       T       C       .       PASS    AA=C;DP=133     GT:GQ:DP        1|1:100:37      1|1:71:31       1|1:100:52
+21     14502478        rs1297139       A       G       .       PASS    AA=G;DP=125     GT:GQ:DP        1|1:100:37      1|1:74:23       1|1:100:69
+10     14798587        rs880068        C       G       .       PASS    AA=G;DP=166     GT:GQ:DP        1|1:100:37      1|1:74:24       1|1:100:60
+12     100556256       rs1697483       T       C       .       PASS    AA=N;DP=124     GT:GQ:DP        1|1:100:37      1|1:74:24       1|1:100:65
+22     35615840        rs5756385       G       A       .       PASS    AA=A;DP=126     GT:GQ:DP        1|1:100:37      1|1:74:24       1|1:100:67
+3      159117606       rs1515476       A       G       .       PASS    AA=a;DP=126     GT:GQ:DP        1|1:100:37      1|1:77:24       1|1:100:66
+5      73666081        rs6859957       A       G       .       PASS    AA=G;DP=130     GT:GQ:DP        1|1:100:37      1|1:77:24       1|1:100:69
+11     27071621        rs7945305       A       G       .       PASS    AA=A;DP=132     GT:GQ:DP        1|1:100:37      1|1:77:24       1|1:100:72
+5      66314470        rs778447        A       G       .       PASS    AA=G;DP=139     GT:GQ:DP        1|1:100:37      1|1:78:33       1|1:100:69
+6      3408535 rs11242860      A       C       .       PASS    AA=N;DP=140     GT:GQ:DP        1|1:100:37      1|1:79:34       1|1:100:68
+6      146539109       rs1997767       C       T       .       PASS    AA=C;DP=128     GT:GQ:DP        1|1:100:37      1|1:80:25       1|1:100:48
+8      12954488        rs481773        A       G       .       PASS    AA=A;DP=121     GT:GQ:DP        1|1:100:37      1|1:80:25       1|1:100:52
+13     102320771       rs7981891       G       A       .       PASS    AA=G;DP=127     GT:GQ:DP        1|1:100:37      1|1:80:25       1|1:100:65
+6      6914285 rs7754817       T       C       .       PASS    AA=C;DP=141     GT:GQ:DP        1|1:100:37      1|1:80:25       1|1:100:78
+17     62106376        rs11651627      T       A       .       PASS    AA=A;DP=139     GT:GQ:DP        1|1:100:37      1|1:81:31       1|1:100:72
+1      212743921       rs6683647       G       A       .       PASS    AA=A;DP=151;HM2 GT:GQ:DP        1|1:100:37      1|1:83:26       1|1:100:85
+3      60090787        rs1474524       C       G       .       PASS    AA=g;DP=137     GT:GQ:DP        1|1:100:37      1|1:83:27       1|1:100:77
+10     81953124        rs2819939       A       G       .       PASS    AA=G;DP=112     GT:GQ:DP        1|1:100:37      1|1:83:28       1|1:100:38
+17     6020961 rs4448997       T       G       .       PASS    AA=G;DP=158     GT:GQ:DP        1|1:100:37      1|1:86:27       1|1:100:95
+7      78728733        rs10237509      A       T       .       PASS    AA=T;DP=137     GT:GQ:DP        1|1:100:37      1|1:86:29       1|1:100:72
+13     32018256        rs208434        G       C       .       PASS    AA=C;DP=130     GT:GQ:DP        1|1:100:37      1|1:88:29       1|1:100:61
+10     53460327        rs10733892      T       G       .       PASS    AA=G;DP=126     GT:GQ:DP        1|1:100:37      1|1:89:28       1|1:100:46
+14     96262833        rs12436991      T       C       .       PASS    AA=T;DP=128     GT:GQ:DP        1|1:100:37      1|1:89:29       1|1:100:55
+9      19875186        .       C       T       .       PASS    AA=T;DP=150     GT:GQ:DP        1|1:100:37      1|1:92:29       1|1:100:81
+15     66106378        rs1387554       T       A       .       PASS    AA=T;DP=157     GT:GQ:DP        1|1:100:37      1|1:92:29       1|1:100:92
+9      131887496       rs625330        A       G       .       PASS    AA=G;DP=131     GT:GQ:DP        1|1:100:37      1|1:92:30       1|1:100:66
+16     81811114        rs7190370       A       G       .       PASS    AA=A;DP=148     GT:GQ:DP        1|1:100:37      1|1:93:36       1|1:100:74
+7      107805166       rs10953569      A       G       .       PASS    AA=G;DP=146     GT:GQ:DP        1|1:100:37      1|1:94:35       1|1:100:75
+7      21276207        rs1476694       C       T       .       PASS    AA=T;DP=131     GT:GQ:DP        1|1:100:37      1|1:95:30       1|1:100:39
+16     71864038        rs9940117       A       G       .       PASS    AA=G;DP=132     GT:GQ:DP        1|1:100:37      1|1:95:30       1|1:100:66
+19     49046344        rs4603682       T       C       .       PASS    AA=t;DP=125     GT:GQ:DP        1|1:100:37      1|1:95:31       1|1:100:57
+9      35690837        rs4879926       C       T       .       PASS    AA=T;DP=139     GT:GQ:DP        1|1:100:37      1|1:98:31       1|1:100:69
+16     48818582        rs9937905       G       A       .       PASS    AA=g;DP=140     GT:GQ:DP        1|1:100:37      1|1:98:31       1|1:100:72
+1      117607484       rs1146278       A       G       .       PASS    AA=G;DP=147;HM2 GT:GQ:DP        1|1:100:37      1|1:98:32       1|1:100:76
+8      16797991        rs6993481       C       G       .       PASS    AA=c;DP=113     GT:GQ:DP        1|1:100:38      0|0:48:19       1|0:100:56
+2      168049992       rs6719316       G       A       .       PASS    AA=G;DP=110     GT:GQ:DP        1|1:100:38      0|0:57:19       1|0:100:42
+6      26689853        rs9467803       C       T       .       PASS    AA=C;DP=126     GT:GQ:DP        1|1:100:38      0|0:58:28       1|0:100:62
+17     65156682        .       C       T       .       PASS    AA=C;DP=113     GT:GQ:DP        1|1:100:38      0|0:60:21       1|0:100:56
+10     34391634        rs7915305       G       A       .       PASS    AA=G;DP=134     GT:GQ:DP        1|1:100:38      0|0:60:22       1|0:100:63
+3      39046060        rs57853578      G       A       .       PASS    AA=G;DP=140     GT:GQ:DP        1|1:100:38      0|0:63:21       1|0:100:78
+7      37228405        rs55768188      C       G       .       PASS    AA=C;DP=146     GT:GQ:DP        1|1:100:38      0|0:66:23       1|0:100:85
+3      123499922       rs6438720       A       C       .       PASS    AA=a;DP=147     GT:GQ:DP        1|1:100:38      0|0:75:25       1|0:100:82
+6      71799865        rs6925100       A       G       .       PASS    AA=G;DP=151     GT:GQ:DP        1|1:100:38      0|0:81:27       1|0:100:86
+20     49383424        rs4811158       T       C       .       PASS    AA=T;DP=150     GT:GQ:DP        1|1:100:38      0|0:84:29       1|0:100:84
+9      6885447 rs10125702      C       G       .       PASS    AA=C;DP=155     GT:GQ:DP        1|1:100:38      0|0:87:29       1|0:100:88
+2      8161744 rs1345838       A       T       .       PASS    AA=A;DP=155     GT:GQ:DP        1|1:100:38      0|0:87:29       1|0:100:91
+7      34855707        rs6972158       A       G       .       PASS    AA=G;DP=161     GT:GQ:DP        1|1:100:38      0|0:87:29       1|0:100:96
+18     49341062        .       C       G       .       PASS    AA=C;DP=139     GT:GQ:DP        1|1:100:38      0|0:90:30       1|0:100:72
+7      53050566        rs11772763      G       C       .       PASS    AA=C;DP=144     GT:GQ:DP        1|1:100:38      0|0:93:45       1|0:100:62
+1      205899351       rs1570567       G       A       .       PASS    AA=A;DP=134;HM2 GT:GQ:DP        1|1:100:38      0|1:100:17      1|0:100:78
+11     72762984        rs7941454       C       T       .       PASS    AA=T;DP=158     GT:GQ:DP        1|1:100:38      0|1:100:22      1|0:100:96
+17     59931468        rs6504237       C       T       .       PASS    AA=T;DP=115     GT:GQ:DP        1|1:100:38      0|1:100:23      1|0:100:52
+3      23236270        rs13081371      A       T       .       PASS    AA=A;DP=161     GT:GQ:DP        1|1:100:38      0|1:100:23      1|0:100:99
+21     34207371        rs2834300       C       T       .       PASS    AA=C;DP=131     GT:GQ:DP        1|1:100:38      0|1:100:27      1|0:100:62
+8      74278786        rs2546240       A       G       .       PASS    AA=G;DP=127     GT:GQ:DP        1|1:100:38      0|1:100:29      1|0:100:47
+16     8468853 rs11861113      T       C       .       PASS    AA=T;DP=124     GT:GQ:DP        1|1:100:38      0|1:100:29      1|0:100:49
+10     79616963        rs1249129       G       A       .       PASS    AA=G;DP=152     GT:GQ:DP        1|1:100:38      0|1:100:30      1|0:100:48
+2      134660614       rs6430501       C       T       .       PASS    AA=C;DP=154     GT:GQ:DP        1|1:100:38      0|1:100:30      1|0:100:89
+4      110940507       rs6533464       G       A       .       PASS    AA=A;DP=137     GT:GQ:DP        1|1:100:38      0|1:100:31      1|0:100:68
+7      148432270       rs12704061      T       C       .       PASS    AA=T;DP=130     GT:GQ:DP        1|1:100:38      0|1:13:15       1|0:100:77
+1      203216390       rs2278798       T       C       .       PASS    AA=C;DP=144;HM2;HM3     GT:GQ:DP        1|1:100:38      0|1:44:23       1|0:100:84
+10     30173244        rs10763761      C       T       .       PASS    AA=T;DP=133     GT:GQ:DP        1|1:100:38      0|1:46:23       1|0:100:75
+21     16011895        rs2823462       T       C       .       PASS    AA=T;DP=125     GT:GQ:DP        1|1:100:38      0|1:72:20       1|0:100:65
+22     24522606        rs8140133       G       A       .       PASS    AA=A;DP=129     GT:GQ:DP        1|1:100:38      0|1:81:22       1|0:100:69
+6      83065715        rs554594        A       G       .       PASS    AA=G;DP=132     GT:GQ:DP        1|1:100:38      0|1:93:24       1|0:100:71
+4      3707969 rs726940        G       C       .       PASS    AA=C;DP=120     GT:GQ:DP        1|1:100:38      1|0:100:14      1|1:100:69
+1      217102953       rs617385        A       G       .       PASS    AA=A;DP=112;HM2;HM3     GT:GQ:DP        1|1:100:38      1|0:100:21      1|1:100:54
+1      107763300       rs12136515      G       C       .       PASS    AA=C;DP=115     GT:GQ:DP        1|1:100:38      1|0:100:21      1|1:100:56
+1      119725567       rs57171146      T       C       .       PASS    AA=T;DP=119     GT:GQ:DP        1|1:100:38      1|0:100:22      1|1:100:60
+7      43215151        rs10951717      A       G       .       PASS    AA=G;DP=137     GT:GQ:DP        1|1:100:38      1|0:100:25      1|1:100:76
+22     47830403        rs5769847       C       G       .       PASS    AA=C;DP=135     GT:GQ:DP        1|1:100:38      1|0:100:27      1|1:100:73
+9      84604939        rs7853116       C       G       .       PASS    AA=G;DP=142     GT:GQ:DP        1|1:100:38      1|0:100:27      1|1:100:79
+5      157124780       rs7700500       T       A       .       PASS    AA=A;DP=136     GT:GQ:DP        1|1:100:38      1|0:100:30      1|1:100:68
+15     31194199        rs345760        A       G       .       PASS    AA=G;DP=153     GT:GQ:DP        1|1:100:38      1|0:100:31      1|1:100:84
+6      29970605        rs3128858       C       T       .       PASS    AA=.;DP=120     GT:GQ:DP        1|1:100:38      1|0:100:32      1|1:100:49
+21     31781279        rs9979758       T       C       .       PASS    AA=T;DP=115     GT:GQ:DP        1|1:100:38      1|0:100:8       1|1:100:69
+19     19029183        rs7258637       C       T       .       PASS    AA=C;DP=106     GT:GQ:DP        1|1:100:38      1|0:29:8        1|1:100:58
+17     36985185        rs4796674       T       C       .       PASS    AA=T;DP=123     GT:GQ:DP        1|1:100:38      1|0:32:13       1|1:100:72
+16     47681019        rs1345407       C       T       .       PASS    AA=T;DP=144     GT:GQ:DP        1|1:100:38      1|0:34:23       1|1:100:83
+7      51090457        rs2010269       C       T       .       PASS    AA=T;DP=145     GT:GQ:DP        1|1:100:38      1|0:55:19       1|1:100:45
+10     91297762        rs12263957      G       C       .       PASS    AA=C;DP=119     GT:GQ:DP        1|1:100:38      1|0:69:21       1|1:100:58
+4      185858243       rs877276        C       T       .       PASS    AA=C;DP=132     GT:GQ:DP        1|1:100:38      1|0:88:23       1|1:100:73
+1      89347676        rs7519323       A       G       .       PASS    AA=G;DP=147;HM3 GT:GQ:DP        1|1:100:38      1|1:100:32      1|1:100:60
+2      104701177       rs1517858       A       G       .       PASS    AA=G;DP=149     GT:GQ:DP        1|1:100:38      1|1:100:34      1|1:100:76
+10     61018701        rs10763611      C       G       .       PASS    AA=G;DP=135     GT:GQ:DP        1|1:100:38      1|1:100:36      1|1:100:60
+12     125054017       rs225536        A       G       .       PASS    AA=G;DP=167     GT:GQ:DP        1|1:100:38      1|1:100:38      1|1:100:47
+1      111405055       rs1282147       A       G       .       PASS    AA=G;DP=114     GT:GQ:DP        1|1:100:38      1|1:24:17       1|1:100:49
+2      181444658       rs6756832       T       C       .       PASS    AA=N;DP=132     GT:GQ:DP        1|1:100:38      1|1:33:12       1|1:100:78
+6      41420397        rs6916897       G       A       .       PASS    AA=G;DP=113     GT:GQ:DP        1|1:100:38      1|1:34:15       1|1:100:59
+7      21171420        rs7459277       C       A       .       PASS    AA=A;DP=150     GT:GQ:DP        1|1:100:38      1|1:35:25       1|1:100:87
+9      136238455       rs11185706      T       C       .       PASS    AA=t;DP=134     GT:GQ:DP        1|1:100:38      1|1:41:12       1|1:100:84
+17     17967705        rs2975002       A       G       .       PASS    AA=G;DP=145     GT:GQ:DP        1|1:100:38      1|1:41:12       1|1:100:96
+10     14716517        rs7906979       C       A       .       PASS    AA=A;DP=123     GT:GQ:DP        1|1:100:38      1|1:41:18       1|1:100:69
+6      111998084       rs6941924       C       T       .       PASS    AA=C;DP=138     GT:GQ:DP        1|1:100:38      1|1:42:18       1|1:100:80
+1      86971710        rs263484        C       T       .       PASS    AA=T;DP=108     GT:GQ:DP        1|1:100:38      1|1:43:23       1|1:59:42
+1      206675737       rs696946        A       C       .       PASS    AA=A;DP=134;HM2 GT:GQ:DP        1|1:100:38      1|1:44:19       1|1:100:77
+11     260987  rs7396066       C       T       .       PASS    AA=t;DP=120     GT:GQ:DP        1|1:100:38      1|1:47:14       1|1:100:59
+10     42825104        rs1271546       A       G       .       PASS    AA=a;DP=109     GT:GQ:DP        1|1:100:38      1|1:48:18       1|1:100:52
+10     98397032        rs912481        C       T       .       PASS    AA=T;DP=123     GT:GQ:DP        1|1:100:38      1|1:50:16       1|1:100:66
+6      106606016       rs9399967       A       G       .       PASS    AA=A;DP=156     GT:GQ:DP        1|1:100:38      1|1:50:17       1|1:100:97
+13     30351403        rs213604        C       T       .       PASS    AA=T;DP=132     GT:GQ:DP        1|1:100:38      1|1:51:21       1|1:100:75
+5      77260528        rs7708563       A       G       .       PASS    AA=A;DP=113     GT:GQ:DP        1|1:100:38      1|1:52:21       1|1:100:53
+1      24302556        rs4649186       A       G       .       PASS    AA=G;DP=146;HM2 GT:GQ:DP        1|1:100:38      1|1:53:16       1|1:100:54
+15     64058878        rs407596        T       C       .       PASS    AA=t;DP=108     GT:GQ:DP        1|1:100:38      1|1:53:17       1|1:100:47
+6      2987063 rs6596939       C       T       .       PASS    AA=T;DP=132     GT:GQ:DP        1|1:100:38      1|1:53:17       1|1:100:78
+8      38567030        rs2593100       C       T       .       PASS    AA=T;DP=129     GT:GQ:DP        1|1:100:38      1|1:53:18       1|1:100:68
+3      48386739        rs12487765      T       C       .       PASS    AA=T;DP=136     GT:GQ:DP        1|1:100:38      1|1:53:18       1|1:100:78
+2      12061149        rs10929776      A       G       .       PASS    AA=G;DP=122     GT:GQ:DP        1|1:100:38      1|1:53:21       1|1:100:52
+6      82186490        rs1562069       G       A       .       PASS    AA=A;DP=121     GT:GQ:DP        1|1:100:38      1|1:53:22       1|1:100:59
+11     15572379        rs4388848       A       G       .       PASS    AA=G;DP=125     GT:GQ:DP        1|1:100:38      1|1:58:28       1|1:100:58
+1      160626883       rs164422        C       T       .       PASS    AA=T;DP=140;HM2 GT:GQ:DP        1|1:100:38      1|1:59:18       1|1:100:85
+11     127314239       rs4936031       T       C       .       PASS    AA=C;DP=130     GT:GQ:DP        1|1:100:38      1|1:59:20       1|1:100:73
+17     8784577 rs9889235       A       G       .       PASS    AA=G;DP=134     GT:GQ:DP        1|1:100:38      1|1:59:20       1|1:100:75
+19     40510525        rs928938        A       G       .       PASS    AA=G;DP=148     GT:GQ:DP        1|1:100:38      1|1:62:19       1|1:100:50
+2      124123413       rs6721307       T       C       .       PASS    AA=C;DP=117     GT:GQ:DP        1|1:100:38      1|1:62:19       1|1:100:60
+2      58151168        rs10205421      G       A       .       PASS    AA=A;DP=135     GT:GQ:DP        1|1:100:38      1|1:63:26       1|1:100:67
+11     25733789        rs12274588      G       A       .       PASS    AA=G;DP=121     GT:GQ:DP        1|1:100:38      1|1:63:31       1|1:100:50
+3      72447263        rs3934821       G       C       .       PASS    AA=C;DP=117     GT:GQ:DP        1|1:100:38      1|1:65:20       1|1:100:47
+2      202435219       rs4140771       T       C       .       PASS    AA=C;DP=140     GT:GQ:DP        1|1:100:38      1|1:65:21       1|1:100:80
+17     52758921        rs868728        A       C       .       PASS    AA=A;DP=149     GT:GQ:DP        1|1:100:38      1|1:65:32       1|1:100:72
+1      56542857        rs1341353       G       A       .       PASS    AA=A;DP=147;HM2;HM3     GT:GQ:DP        1|1:100:38      1|1:66:28       1|1:100:81
+16     6918924 rs1532224       G       C       .       PASS    AA=C;DP=133     GT:GQ:DP        1|1:100:38      1|1:67:29       1|1:100:66
+3      21370993        rs2731939       C       T       .       PASS    AA=T;DP=130     GT:GQ:DP        1|1:100:38      1|1:68:21       1|1:100:70
+3      58087480        rs2362903       A       G       .       PASS    AA=T;DP=115     GT:GQ:DP        1|1:100:38      1|1:68:22       1|1:100:58
+18     6445106 rs4329993       A       G       .       PASS    AA=G;DP=128     GT:GQ:DP        1|1:100:38      1|1:68:22       1|1:100:65
+12     32075577        rs901331        C       G       .       PASS    AA=G;DP=139     GT:GQ:DP        1|1:100:38      1|1:71:22       1|1:100:79
+9      16393892        rs9406643       A       G       .       PASS    AA=G;DP=163     GT:GQ:DP        1|1:100:38      1|1:74:23       1|1:100:101
+5      112252230       rs458451        T       C       .       PASS    AA=C;DP=137     GT:GQ:DP        1|1:100:38      1|1:74:23       1|1:100:75
+2      215488449       rs6435865       A       C       .       PASS    AA=C;DP=122     GT:GQ:DP        1|1:100:38      1|1:74:24       1|1:100:60
+3      29939638        rs1449277       G       A       .       PASS    AA=A;DP=139     GT:GQ:DP        1|1:100:38      1|1:74:25       1|1:100:78
+6      140052206       rs6570371       A       G       .       PASS    AA=G;DP=123     GT:GQ:DP        1|1:100:38      1|1:77:24       1|1:100:48
+3      32933727        rs13071058      G       A       .       PASS    AA=G;DP=133     GT:GQ:DP        1|1:100:38      1|1:77:24       1|1:100:71
+20     9941452 rs6039651       C       T       .       PASS    AA=T;DP=118     GT:GQ:DP        1|1:100:38      1|1:77:25       1|1:100:58
+5      94149976        rs255351        T       C       .       PASS    AA=T;DP=140     GT:GQ:DP        1|1:100:38      1|1:80:25       1|1:100:77
+17     17779749        rs4341796       C       A       .       PASS    AA=A;DP=141     GT:GQ:DP        1|1:100:38      1|1:80:25       1|1:100:78
+4      147020452       rs13128814      G       A       .       PASS    AA=A;DP=141     GT:GQ:DP        1|1:100:38      1|1:80:25       1|1:100:78
+2      114724500       rs1505438       C       T       .       PASS    AA=T;DP=152     GT:GQ:DP        1|1:100:38      1|1:83:26       1|1:100:47
+3      88032919        rs1465648       C       T       .       PASS    AA=T;DP=120     GT:GQ:DP        1|1:100:38      1|1:83:26       1|1:100:55
+14     69464561        rs1276115       C       G       .       PASS    AA=G;DP=144     GT:GQ:DP        1|1:100:38      1|1:83:27       1|1:100:78
+18     55813920        rs1942904       T       C       .       PASS    AA=C;DP=146     GT:GQ:DP        1|1:100:38      1|1:83:28       1|1:100:84
+1      31760736        rs6425761       A       G       .       PASS    AA=G;DP=119     GT:GQ:DP        1|1:100:38      1|1:86:27       1|1:100:43
+2      211246458       rs10179039      A       G       .       PASS    AA=G;DP=133     GT:GQ:DP        1|1:100:38      1|1:86:27       1|1:100:68
+3      122242469       rs1795418       G       A       .       PASS    AA=A;DP=121     GT:GQ:DP        1|1:100:38      1|1:86:28       1|1:100:55
+8      116027297       rs7840884       G       A       .       PASS    AA=A;DP=112     GT:GQ:DP        1|1:100:38      1|1:89:29       1|1:100:37
+11     117096794       rs948106        C       T       .       PASS    AA=C;DP=169     GT:GQ:DP        1|1:100:38      1|1:89:29       1|1:100:76
+17     6846348 rs13396 T       C       .       PASS    AA=T;DP=156     GT:GQ:DP        1|1:100:38      1|1:89:29       1|1:100:89
+5      135423763       rs6894815       G       C       .       PASS    AA=g;DP=152     GT:GQ:DP        1|1:100:38      1|1:89:36       1|1:100:77
+21     38366840        rs995819        A       G       .       PASS    AA=G;DP=132     GT:GQ:DP        1|1:100:38      1|1:92:29       1|1:100:65
+3      71791102        rs704275        G       A       .       PASS    AA=A;DP=138     GT:GQ:DP        1|1:100:38      1|1:92:29       1|1:100:71
+8      133549838       rs2597372       C       T       .       PASS    AA=T;DP=148     GT:GQ:DP        1|1:100:38      1|1:92:29       1|1:100:81
+8      130733180       rs7821868       T       C       .       PASS    AA=N;DP=132     GT:GQ:DP        1|1:100:38      1|1:92:30       1|1:100:64
+17     52283841        rs4793835       C       G       .       PASS    AA=G;DP=138     GT:GQ:DP        1|1:100:38      1|1:92:31       1|1:100:68
+9      96361586        rs2993965       T       G       .       PASS    AA=G;DP=144     GT:GQ:DP        1|1:100:38      1|1:94:32       1|1:100:73
+5      75483026        rs10942756      T       C       .       PASS    AA=T;DP=154     GT:GQ:DP        1|1:100:39      0|0:100:36      1|0:100:78
+5      52326637        rs35233 G       A       .       PASS    AA=g;DP=165     GT:GQ:DP        1|1:100:39      0|0:100:37      1|0:100:91
+2      208888793       rs6724208       T       G       .       PASS    AA=T;DP=108     GT:GQ:DP        1|1:100:39      0|0:34:17       1|0:100:53
+21     40882056        .       T       C       .       PASS    AA=T;DP=112     GT:GQ:DP        1|1:100:39      0|0:39:13       1|0:100:59
+7      101509986       rs58217530      G       C       .       PASS    AA=G;DP=144     GT:GQ:DP        1|1:100:39      0|0:57:23       1|0:100:76
+12     76701213        rs11106684      A       G       .       PASS    AA=G;DP=129     GT:GQ:DP        1|1:100:39      0|0:60:20       1|0:100:72
+6      109126299       rs531111        T       C       .       PASS    AA=T;DP=177     GT:GQ:DP        1|1:100:39      0|0:69:23       1|0:100:53
+13     72937265        rs9564996       G       A       .       PASS    AA=A;DP=138     GT:GQ:DP        1|1:100:39      0|0:69:25       1|0:100:75
+5      169422585       rs7731587       T       C       .       PASS    AA=C;DP=144     GT:GQ:DP        1|1:100:39      0|0:72:25       1|0:100:80
+15     45450394        rs60569972      G       A       .       PASS    AA=G;DP=121     GT:GQ:DP        1|1:100:39      0|0:72:28       1|0:100:55
+11     4446686 rs10768026      A       T       .       PASS    AA=A;DP=146     GT:GQ:DP        1|1:100:39      0|0:78:27       1|0:100:82
+5      176630450       rs10077929      C       T       .       PASS    AA=C;DP=131     GT:GQ:DP        1|1:100:39      0|0:81:27       1|0:100:68
+8      95607644        rs2890827       T       C       .       PASS    AA=t;DP=147     GT:GQ:DP        1|1:100:39      0|0:87:29       1|0:100:40
+11     9707333 rs436637        A       T       .       PASS    AA=A;DP=139     GT:GQ:DP        1|1:100:39      0|0:87:29       1|0:100:73
+11     111645409       rs2511522       G       A       .       PASS    AA=A;DP=163     GT:GQ:DP        1|1:100:39      0|0:93:32       1|0:100:46
+2      113537143       rs3180235       A       G       .       PASS    AA=G;DP=117     GT:GQ:DP        1|1:100:39      0|1:100:16      1|0:100:61
+1      182332817       rs10797939      C       T       .       PASS    AA=T;DP=131     GT:GQ:DP        1|1:100:39      0|1:100:20      1|0:100:75
+4      77160842        rs10014837      G       A       .       PASS    AA=G;DP=130     GT:GQ:DP        1|1:100:39      0|1:100:22      1|0:100:70
+16     82379806        rs1645850       G       C       .       PASS    AA=G;DP=154     GT:GQ:DP        1|1:100:39      0|1:100:23      1|0:100:96
+12     27711569        rs2033024       C       T       .       PASS    AA=T;DP=152     GT:GQ:DP        1|1:100:39      0|1:100:27      1|0:100:46
+20     46237272        rs615124        T       A       .       PASS    AA=T;DP=142     GT:GQ:DP        1|1:100:39      0|1:100:28      1|0:100:75
+1      90052884        rs1744663       C       T       .       PASS    AA=T;DP=164;HM2;HM3     GT:GQ:DP        1|1:100:39      0|1:100:34      1|0:100:91
+2      236212235       rs2316908       G       A       .       PASS    AA=G;DP=163     GT:GQ:DP        1|1:100:39      0|1:100:35      1|0:100:85
+13     45014755        rs2985998       T       C       .       PASS    AA=t;DP=112     GT:GQ:DP        1|1:100:39      0|1:16:10       1|0:100:60
+10     58359375        rs61854569      T       C       .       PASS    AA=T;DP=121     GT:GQ:DP        1|1:100:39      0|1:35:16       1|0:100:65
+22     35945306        rs2187750       C       A       .       PASS    AA=A;DP=125     GT:GQ:DP        1|1:100:39      0|1:72:22       1|0:100:65
+2      186883056       rs4667079       C       A       .       PASS    AA=c;DP=120     GT:GQ:DP        1|1:100:39      0|1:86:17       1|0:100:65
+4      81975726        rs57084911      A       G       .       PASS    AA=A;DP=120     GT:GQ:DP        1|1:100:39      1|0:100:18      1|1:100:65
+5      46157563        rs8185016       T       C       .       PASS    AA=.;DP=116     GT:GQ:DP        1|1:100:39      1|0:100:21      1|1:100:57
+3      17181411        rs2596654       T       C       .       PASS    AA=C;DP=142     GT:GQ:DP        1|1:100:39      1|0:100:22      1|1:100:82
+9      119659951       rs629902        G       A       .       PASS    AA=A;DP=134     GT:GQ:DP        1|1:100:39      1|0:100:25      1|1:100:56
+3      72398278        rs4234161       G       C       .       PASS    AA=C;DP=138     GT:GQ:DP        1|1:100:39      1|0:100:29      1|1:100:70
+2      230668378       rs4435440       A       G       .       PASS    AA=A;DP=130     GT:GQ:DP        1|1:100:39      1|0:100:30      1|1:100:60
+13     97753625        rs672151        G       A       .       PASS    AA=G;DP=132     GT:GQ:DP        1|1:100:39      1|0:100:31      1|1:100:58
+2      199488579       rs4674604       A       G       .       PASS    AA=G;DP=140     GT:GQ:DP        1|1:100:39      1|0:100:35      1|1:100:66
+2      238033664       rs6709497       C       T       .       PASS    AA=c;DP=173     GT:GQ:DP        1|1:100:39      1|0:100:38      1|1:100:99
+4      27206465        rs1375775       C       T       .       PASS    AA=c;DP=150     GT:GQ:DP        1|1:100:39      1|0:47:36       1|1:100:77
+6      23337492        rs9466682       G       C       .       PASS    AA=C;DP=117     GT:GQ:DP        1|1:100:39      1|0:93:15       1|1:100:64
+2      35609489        .       C       T       .       PASS    AA=C;DP=133     GT:GQ:DP        1|1:100:39      1|0:96:27       1|1:100:57
+11     117011775       rs2155130       T       C       .       PASS    AA=T;DP=142     GT:GQ:DP        1|1:100:39      1|0:97:25       1|1:100:70
+11     73950487        rs7130461       C       A       .       PASS    AA=C;DP=133     GT:GQ:DP        1|1:100:39      1|1:100:34      1|1:100:59
+5      177426765       rs7443165       A       G       .       PASS    AA=.;DP=129     GT:GQ:DP        1|1:100:39      1|1:20:14       1|1:100:74
+14     70687464        rs8007869       G       A       .       PASS    AA=A;DP=107     GT:GQ:DP        1|1:100:39      1|1:21:16       1|1:100:43
+3      185573843       rs6142  G       T       .       PASS    AA=g;DP=156     GT:GQ:DP        1|1:100:39      1|1:29:19       1|1:100:98
+10     8499483 rs7082816       T       A       .       PASS    AA=A;DP=129     GT:GQ:DP        1|1:100:39      1|1:30:23       1|1:100:66
+16     51546939        rs7184273       A       G       .       PASS    AA=G;DP=112     GT:GQ:DP        1|1:100:39      1|1:35:19       1|1:100:54
+5      158067098       rs1560044       C       T       .       PASS    AA=C;DP=140     GT:GQ:DP        1|1:100:39      1|1:40:25       1|1:100:76
+15     83346133        rs8026543       G       A       .       PASS    AA=g;DP=148     GT:GQ:DP        1|1:100:39      1|1:41:18       1|1:100:92
+12     39153600        rs2933346       T       G       .       PASS    AA=T;DP=118     GT:GQ:DP        1|1:100:39      1|1:41:23       1|1:100:58
+21     19151462        rs7281956       A       G       .       PASS    AA=G;DP=120     GT:GQ:DP        1|1:100:39      1|1:41:23       1|1:100:59
+8      95097035        rs3018858       A       G       .       PASS    AA=G;DP=135     GT:GQ:DP        1|1:100:39      1|1:42:21       1|1:100:63
+5      117837085       rs4422555       A       C       .       PASS    AA=C;DP=131     GT:GQ:DP        1|1:100:39      1|1:43:24       1|1:100:71
+7      155427778       rs7802543       A       G       .       PASS    AA=G;DP=152     GT:GQ:DP        1|1:100:39      1|1:49:26       1|1:100:81
+2      127592130       rs10929007      A       G       .       PASS    AA=G;DP=152     GT:GQ:DP        1|1:100:39      1|1:50:15       1|1:100:101
+3      27643462        rs3846008       A       G       .       PASS    AA=G;DP=99      GT:GQ:DP        1|1:100:39      1|1:50:15       1|1:100:37
+1      159149874       rs4017454       T       A       .       PASS    AA=A;DP=106     GT:GQ:DP        1|1:100:39      1|1:50:15       1|1:100:55
+17     7354823 rs8076657       A       G       .       PASS    AA=G;DP=151     GT:GQ:DP        1|1:100:39      1|1:50:16       1|1:100:94
+11     33677049        rs831613        T       C       .       PASS    AA=C;DP=114     GT:GQ:DP        1|1:100:39      1|1:53:17       1|1:100:61
+15     70303497        rs6494995       C       A       .       PASS    AA=A;DP=145     GT:GQ:DP        1|1:100:39      1|1:53:20       1|1:100:86
+6      7865807 rs419588        T       C       .       PASS    AA=C;DP=153     GT:GQ:DP        1|1:100:39      1|1:55:28       1|1:100:89
+2      198533707       rs13408411      G       A       .       PASS    AA=A;DP=99      GT:GQ:DP        1|1:100:39      1|1:56:18       1|1:100:32
+1      70850415        rs1413956       T       C       .       PASS    AA=C;DP=118;HM2 GT:GQ:DP        1|1:100:39      1|1:56:19       1|1:100:61
+10     66429707        rs10740178      A       G       .       PASS    AA=G;DP=127     GT:GQ:DP        1|1:100:39      1|1:58:25       1|1:100:63
+5      168546291       rs10462982      G       A       .       PASS    AA=G;DP=131     GT:GQ:DP        1|1:100:39      1|1:59:18       1|1:100:74
+13     79280254        rs6563134       T       C       .       PASS    AA=C;DP=145     GT:GQ:DP        1|1:100:39      1|1:59:19       1|1:100:88
+5      43185276        rs6885937       G       A       .       PASS    AA=A;DP=130     GT:GQ:DP        1|1:100:39      1|1:62:19       1|1:100:67
+18     74271788        rs664618        G       C       .       PASS    AA=C;DP=138     GT:GQ:DP        1|1:100:39      1|1:62:20       1|1:100:79
+12     46605880        rs4760670       A       G       .       PASS    AA=G;DP=162     GT:GQ:DP        1|1:100:39      1|1:63:26       1|1:100:100
+19     11766343        rs7253875       A       G       .       PASS    AA=G;DP=127     GT:GQ:DP        1|1:100:39      1|1:65:20       1|1:100:70
+14     53903051        rs6572949       C       T       .       PASS    AA=T;DP=137     GT:GQ:DP        1|1:100:39      1|1:65:20       1|1:100:80
+16     5326895 rs938759        G       C       .       PASS    AA=C;DP=151     GT:GQ:DP        1|1:100:39      1|1:65:20       1|1:100:94
+4      97124570        rs263069        A       G       .       PASS    AA=G;DP=104     GT:GQ:DP        1|1:100:39      1|1:65:21       1|1:100:40
+10     32420346        rs211357        C       T       .       PASS    AA=T;DP=121     GT:GQ:DP        1|1:100:39      1|1:68:21       1|1:100:59
+6      134775775       rs9483697       A       G       .       PASS    AA=G;DP=135     GT:GQ:DP        1|1:100:39      1|1:68:22       1|1:100:75
+1      10502237        rs2506884       G       C       .       PASS    AA=C;DP=144;HM2 GT:GQ:DP        1|1:100:39      1|1:68:22       1|1:100:83
+5      65255598        rs40194 G       A       .       PASS    AA=G;DP=144     GT:GQ:DP        1|1:100:39      1|1:69:33       1|1:100:72
+15     50603238        rs1693507       A       C       .       PASS    AA=A;DP=160     GT:GQ:DP        1|1:100:39      1|1:70:28       1|1:100:71
+2      24480130        rs2584927       T       C       .       PASS    AA=C;DP=153     GT:GQ:DP        1|1:100:39      1|1:71:23       1|1:100:92
+13     95629390        rs1831094       A       C       .       PASS    AA=A;DP=134     GT:GQ:DP        1|1:100:39      1|1:74:23       1|1:100:60
+2      156401279       rs10190879      T       C       .       PASS    AA=t;DP=106     GT:GQ:DP        1|1:100:39      1|1:74:24       1|1:100:43
+12     70636293        rs7955501       T       A       .       PASS    AA=T;DP=157     GT:GQ:DP        1|1:100:39      1|1:74:24       1|1:100:56
+22     15917574        rs1005208       C       T       .       PASS    AA=T;DP=156     GT:GQ:DP        1|1:100:39      1|1:74:25       1|1:100:90
+11     126342529       rs589211        C       G       .       PASS    AA=G;DP=124     GT:GQ:DP        1|1:100:39      1|1:76:27       1|1:100:58
+16     8172028 rs1381534       T       G       .       PASS    AA=G;DP=121     GT:GQ:DP        1|1:100:39      1|1:77:24       1|1:100:57
+10     97111958        rs7904517       C       T       .       PASS    AA=T;DP=139     GT:GQ:DP        1|1:100:39      1|1:77:24       1|1:100:59
+1      52925632        rs407856        T       C       .       PASS    AA=C;DP=130;HM2;HM3     GT:GQ:DP        1|1:100:39      1|1:77:24       1|1:100:67
+2      127629514       rs10496660      C       T       .       PASS    AA=T;DP=142     GT:GQ:DP        1|1:100:39      1|1:77:24       1|1:100:80
+19     45715441        rs10413556      A       G       .       PASS    AA=G;DP=134     GT:GQ:DP        1|1:100:39      1|1:77:25       1|1:100:71
+9      17486158        rs2441988       T       C       .       PASS    AA=t;DP=109     GT:GQ:DP        1|1:100:39      1|1:77:26       1|1:100:41
+2      613798  rs11127484      T       C       .       PASS    AA=C;DP=120     GT:GQ:DP        1|1:100:39      1|1:77:26       1|1:100:56
+16     76538936        rs430416        C       T       .       PASS    AA=T;DP=140     GT:GQ:DP        1|1:100:39      1|1:77:26       1|1:100:79
+11     114785703       rs1398259       T       C       .       PASS    AA=T;DP=129     GT:GQ:DP        1|1:100:39      1|1:77:27       1|1:100:64
+17     5699306 rs888324        A       G       .       PASS    AA=G;DP=140     GT:GQ:DP        1|1:100:39      1|1:83:27       1|1:100:74
+4      183799250       rs3860640       G       A       .       PASS    AA=A;DP=171     GT:GQ:DP        1|1:100:39      1|1:95:30       1|1:100:54
+1      152946191       rs1995662       C       T       .       PASS    AA=C;DP=151;HM2;HM3     GT:GQ:DP        1|1:100:40      0|0:100:36      1|0:100:77
+12     58963263        .       G       A       .       PASS    AA=G;DP=128     GT:GQ:DP        1|1:100:40      0|0:25:17       1|0:100:72
+11     66037846        rs7951189       G       A       .       PASS    AA=G;DP=118     GT:GQ:DP        1|1:100:40      0|0:45:15       1|0:100:60
+10     121976410       rs883195        G       A       .       PASS    AA=A;DP=168     GT:GQ:DP        1|1:100:40      0|0:55:30       1|0:100:102
+5      171675657       .       C       T       .       PASS    AA=C;DP=134     GT:GQ:DP        1|1:100:40      0|0:57:19       1|0:100:78
+15     50167456        rs12050787      G       A       .       PASS    AA=g;DP=149     GT:GQ:DP        1|1:100:40      0|0:60:20       1|0:100:51
+4      31206650        rs61792140      C       T       .       PASS    AA=c;DP=134     GT:GQ:DP        1|1:100:40      0|0:66:23       1|0:100:67
+10     70635063        rs12256724      A       G       .       PASS    AA=a;DP=153     GT:GQ:DP        1|1:100:40      0|0:78:26       1|0:100:87
+10     67844229        .       T       C       .       PASS    AA=T;DP=146     GT:GQ:DP        1|1:100:40      0|0:81:27       1|0:100:81
+1      38327976        rs7531330       A       G       .       PASS    AA=A;DP=158     GT:GQ:DP        1|1:100:40      0|0:84:28       1|0:100:49
+10     69629843        rs4746738       C       T       .       PASS    AA=C;DP=164     GT:GQ:DP        1|1:100:40      0|0:84:29       1|0:100:52
+4      190335593       rs4467646       C       G       .       PASS    AA=C;DP=166     GT:GQ:DP        1|1:100:40      0|0:90:30       1|0:100:88
+18     41220027        rs35828404      C       T       .       PASS    AA=C;DP=136     GT:GQ:DP        1|1:100:40      0|0:93:32       1|0:100:65
+15     99444860        rs28699332      T       C       .       PASS    AA=C;DP=156     GT:GQ:DP        1|1:100:40      0|1:100:26      1|0:100:93
+1      42180746        rs7523668       G       A       .       PASS    AA=A;DP=172;HM2;HM3     GT:GQ:DP        1|1:100:40      0|1:100:32      1|0:100:54
+12     106845268       rs7298941       C       T       .       PASS    AA=T;DP=155     GT:GQ:DP        1|1:100:40      0|1:100:35      1|0:100:83
+3      11261220        rs347585        C       T       .       PASS    AA=C;DP=163     GT:GQ:DP        1|1:100:40      0|1:100:37      1|0:100:86
+14     92471846        rs875395        C       G       .       PASS    AA=C;DP=139     GT:GQ:DP        1|1:100:40      0|1:35:21       1|0:100:79
+20     48123636        rs1007580       G       A       .       PASS    AA=A;DP=113     GT:GQ:DP        1|1:100:40      0|1:36:13       1|0:100:52
+9      133936943       rs9411439       T       C       .       PASS    AA=N;DP=123     GT:GQ:DP        1|1:100:40      0|1:47:24       1|0:100:61
+3      43268273        rs4234427       A       G       .       PASS    AA=G;DP=145     GT:GQ:DP        1|1:100:40      0|1:70:18       1|0:100:86
+10     115990473       .       T       C       .       PASS    AA=T;DP=128     GT:GQ:DP        1|1:100:40      0|1:83:30       1|0:100:56
+10     20687873        rs4237356       T       C       .       PASS    AA=T;DP=147     GT:GQ:DP        1|1:100:40      0|1:85:22       1|0:100:41
+9      32876199        rs10971181      T       C       .       PASS    AA=C;DP=139     GT:GQ:DP        1|1:100:40      0|1:86:29       1|0:100:68
+2      54402429        rs865231        C       T       .       PASS    AA=C;DP=132     GT:GQ:DP        1|1:100:40      0|1:93:28       1|0:100:63
+21     39621246        rs11088472      A       C       .       PASS    AA=A;DP=110     GT:GQ:DP        1|1:100:40      1|0:100:20      1|1:66:49
+18     30922171        rs553192        T       C       .       PASS    AA=C;DP=130     GT:GQ:DP        1|1:100:40      1|0:100:22      1|1:100:69
+4      9611763 rs55695462      T       C       .       PASS    AA=N;DP=134     GT:GQ:DP        1|1:100:40      1|0:100:23      1|1:100:73
+13     80302509        rs61966220      G       A       .       PASS    AA=G;DP=123     GT:GQ:DP        1|1:100:40      1|0:100:25      1|1:100:60
+8      37330126        rs239463        A       G       .       PASS    AA=G;DP=149     GT:GQ:DP        1|1:100:40      1|0:100:25      1|1:100:86
+4      87146221        rs2164537       G       A       .       PASS    AA=A;DP=147     GT:GQ:DP        1|1:100:40      1|0:100:28      1|1:100:77
+1      168405124       rs477960        T       C       .       PASS    AA=T;DP=150     GT:GQ:DP        1|1:100:40      1|0:100:30      1|1:100:62
+6      32873707        rs1383260       C       G       .       PASS    AA=c;DP=142     GT:GQ:DP        1|1:100:40      1|0:100:30      1|1:100:66
+8      22594329        rs10104039      T       C       .       PASS    AA=t;DP=157     GT:GQ:DP        1|1:100:40      1|0:100:36      1|1:100:81
+17     916387  rs7223604       T       G       .       PASS    AA=T;DP=123     GT:GQ:DP        1|1:100:40      1|0:68:22       1|1:100:62
+19     42326131        rs7259332       G       T       .       PASS    AA=T;DP=95      GT:GQ:DP        1|1:100:40      1|0:70:20       1|1:78:37
+X      1603194 rs5948934       C       T       .       PASS    AA=N;DP=118     GT:GQ:DP        1|1:100:40      1|0:76:21       1|1:100:56
+12     51030441        rs1732318       A       C       .       PASS    AA=C;DP=144     GT:GQ:DP        1|1:100:40      1|0:81:19       1|1:100:84
+6      37816141        rs7767440       G       C       .       PASS    AA=C;DP=117     GT:GQ:DP        1|1:100:40      1|0:86:19       1|1:100:58
+15     62205536        rs2290121       C       T       .       PASS    AA=T;DP=149     GT:GQ:DP        1|1:100:40      1|0:88:21       1|1:100:48
+19     55034941        rs921470        T       C       .       PASS    AA=C;DP=159     GT:GQ:DP        1|1:100:40      1|1:100:32      1|1:100:83
+2      12012782        rs893786        G       A       .       PASS    AA=A;DP=124     GT:GQ:DP        1|1:100:40      1|1:100:33      1|1:100:41
+1      167323570       rs1200106       A       G       .       PASS    AA=a;DP=138     GT:GQ:DP        1|1:100:40      1|1:100:33      1|1:100:65
+14     59814387        rs7146234       A       G       .       PASS    AA=G;DP=157     GT:GQ:DP        1|1:100:40      1|1:100:33      1|1:100:83
+10     82543026        rs7087248       G       A       .       PASS    AA=A;DP=148     GT:GQ:DP        1|1:100:40      1|1:100:34      1|1:100:76
+12     2217091 rs12315711      T       A       .       PASS    AA=T;DP=172     GT:GQ:DP        1|1:100:40      1|1:100:37      1|1:100:96
+3      102700307       rs3846091       A       C       .       PASS    AA=C;DP=114     GT:GQ:DP        1|1:100:40      1|1:21:16       1|1:100:51
+7      126785518       rs1361938       G       T       .       PASS    AA=G;DP=129     GT:GQ:DP        1|1:100:40      1|1:27:18       1|1:100:71
+10     71928313        rs12571825      A       G       .       PASS    AA=A;DP=137     GT:GQ:DP        1|1:100:40      1|1:34:22       1|1:100:78
+11     73203079        rs11235916      T       C       .       PASS    AA=T;DP=112     GT:GQ:DP        1|1:100:40      1|1:35:19       1|1:100:53
+1      228274085       rs12240271      A       G       .       PASS    AA=A;DP=125     GT:GQ:DP        1|1:100:40      1|1:35:21       1|1:100:56
+2      28263693        rs4444476       T       C       .       PASS    AA=C;DP=123     GT:GQ:DP        1|1:100:40      1|1:38:12       1|1:100:72
+2      182079691       rs10803949      A       T       .       PASS    AA=T;DP=109     GT:GQ:DP        1|1:100:40      1|1:38:17       1|1:100:49
+22     24788134        rs1003547       T       G       .       PASS    AA=G;DP=140     GT:GQ:DP        1|1:100:40      1|1:43:18       1|1:100:84
+1      204448786       rs28570494      T       C       .       PASS    AA=C;DP=116;HM3 GT:GQ:DP        1|1:100:40      1|1:44:20       1|1:100:47
+17     31934200        rs6607288       T       C       .       PASS    AA=C;DP=132     GT:GQ:DP        1|1:100:40      1|1:47:15       1|1:100:75
+10     44699361        rs4948920       G       A       .       PASS    AA=-;DP=120     GT:GQ:DP        1|1:100:40      1|1:47:20       1|1:100:57
+22     44104056        rs742013        T       C       .       PASS    AA=C;DP=116     GT:GQ:DP        1|1:100:40      1|1:50:15       1|1:100:62
+7      135047876       rs4732135       G       A       .       PASS    AA=G;DP=128     GT:GQ:DP        1|1:100:40      1|1:50:16       1|1:100:73
+6      164551646       rs807910        C       T       .       PASS    AA=T;DP=113     GT:GQ:DP        1|1:100:40      1|1:50:25       1|1:100:51
+5      176698783       rs4976685       A       G       .       PASS    AA=G;DP=126     GT:GQ:DP        1|1:100:40      1|1:52:21       1|1:100:65
+20     61209419        rs6090244       T       C       .       PASS    AA=C;DP=123     GT:GQ:DP        1|1:100:40      1|1:53:16       1|1:100:65
+12     106242124       rs1426456       T       G       .       PASS    AA=T;DP=111     GT:GQ:DP        1|1:100:40      1|1:56:17       1|1:100:54
+10     64097655        rs7075349       G       A       .       PASS    AA=A;DP=127     GT:GQ:DP        1|1:100:40      1|1:56:17       1|1:100:70
+9      132088085       rs7868572       T       C       .       PASS    AA=C;DP=134     GT:GQ:DP        1|1:100:40      1|1:56:19       1|1:100:75
+1      244294848       rs6426271       C       T       .       PASS    AA=T;DP=101;HM2;HM3     GT:GQ:DP        1|1:100:40      1|1:59:18       1|1:100:39
+4      130656799       rs600813        A       G       .       PASS    AA=a;DP=129     GT:GQ:DP        1|1:100:40      1|1:59:18       1|1:100:75
+1      69087649        rs10789271      G       A       .       PASS    AA=A;DP=134;HM2 GT:GQ:DP        1|1:100:40      1|1:59:19       1|1:100:74
+22     45697662        rs7290083       C       T       .       PASS    AA=T;DP=114     GT:GQ:DP        1|1:100:40      1|1:62:20       1|1:100:55
+2      238233644       rs6721784       A       G       .       PASS    AA=G;DP=139     GT:GQ:DP        1|1:100:40      1|1:63:25       1|1:100:72
+7      143939077       rs11979143      G       A       .       PASS    AA=A;DP=108     GT:GQ:DP        1|1:100:40      1|1:65:20       1|1:100:37
+9      75302716        rs402378        T       G       .       PASS    AA=G;DP=104     GT:GQ:DP        1|1:100:40      1|1:65:20       1|1:100:39
+2      150817626       rs4324337       T       C       .       PASS    AA=C;DP=124     GT:GQ:DP        1|1:100:40      1|1:65:20       1|1:100:64
+4      177696725       rs309779        G       A       .       PASS    AA=A;DP=129     GT:GQ:DP        1|1:100:40      1|1:65:21       1|1:100:56
+21     40290637        rs7510187       C       G       .       PASS    AA=C;DP=123     GT:GQ:DP        1|1:100:40      1|1:65:21       1|1:100:62
+1      19008692        rs6603913       C       T       .       PASS    AA=T;DP=140     GT:GQ:DP        1|1:100:40      1|1:65:21       1|1:100:81
+1      220124821       rs6604683       T       C       .       PASS    AA=C;DP=152;HM2;HM3     GT:GQ:DP        1|1:100:40      1|1:66:26       1|1:100:85
+1      112456975       rs421299        C       T       .       PASS    AA=C;DP=166     GT:GQ:DP        1|1:100:40      1|1:66:27       1|1:100:100
+1      36877864        rs10908312      T       C       .       PASS    AA=C;DP=132;HM2 GT:GQ:DP        1|1:100:40      1|1:68:21       1|1:100:69
+9      34877181        rs628789        G       A       .       PASS    AA=N;DP=161     GT:GQ:DP        1|1:100:40      1|1:68:22       1|1:100:100
+9      119584509       rs7041420       C       T       .       PASS    AA=T;DP=145     GT:GQ:DP        1|1:100:40      1|1:68:22       1|1:100:83
+5      135033530       rs2188921       C       T       .       PASS    AA=C;DP=139     GT:GQ:DP        1|1:100:40      1|1:70:28       1|1:100:70
+1      113774723       rs2359417       G       A       .       PASS    AA=G;DP=103;HM2;HM3     GT:GQ:DP        1|1:100:40      1|1:71:22       1|1:100:40
+11     44254251        rs7945249       G       C       .       PASS    AA=C;DP=135     GT:GQ:DP        1|1:100:40      1|1:71:23       1|1:100:74
+2      216609401       rs12694382      A       G       .       PASS    AA=G;DP=151     GT:GQ:DP        1|1:100:40      1|1:71:23       1|1:100:87
+13     50180423        rs797509        C       G       .       PASS    AA=G;DP=144     GT:GQ:DP        1|1:100:40      1|1:76:25       1|1:100:78
+20     36872238        rs6124079       G       A       .       PASS    AA=A;DP=121     GT:GQ:DP        1|1:100:40      1|1:77:24       1|1:100:48
+13     42061799        rs2148073       G       C       .       PASS    AA=C;DP=140     GT:GQ:DP        1|1:100:40      1|1:80:25       1|1:100:73
+1      203260558       rs2802837       A       G       .       PASS    AA=a;DP=157;HM2;HM3     GT:GQ:DP        1|1:100:40      1|1:83:27       1|1:100:51
+9      73783976        rs10119158      A       C       .       PASS    AA=C;DP=148     GT:GQ:DP        1|1:100:40      1|1:85:33       1|1:100:77
+11     44448600        rs173358        A       G       .       PASS    AA=G;DP=134     GT:GQ:DP        1|1:100:40      1|1:86:28       1|1:100:68
+2      49069788        rs2072487       C       T       .       PASS    AA=T;DP=130     GT:GQ:DP        1|1:100:40      1|1:89:28       1|1:100:63
+2      133208643       rs1430629       C       T       .       PASS    AA=c;DP=153     GT:GQ:DP        1|1:100:40      1|1:89:28       1|1:100:83
+16     9124449 rs9926522       A       G       .       PASS    AA=G;DP=160     GT:GQ:DP        1|1:100:40      1|1:89:29       1|1:100:78
+11     56744928        rs4939114       A       G       .       PASS    AA=G;DP=148     GT:GQ:DP        1|1:100:40      1|1:89:31       1|1:100:78
+17     66765437        rs12950832      T       A       .       PASS    AA=T;DP=133     GT:GQ:DP        1|1:100:40      1|1:92:29       1|1:100:66
+20     10305405        rs6133885       T       C       .       PASS    AA=C;DP=143     GT:GQ:DP        1|1:100:40      1|1:92:29       1|1:100:74
+11     7277737 rs2346809       C       T       .       PASS    AA=T;DP=150     GT:GQ:DP        1|1:100:40      1|1:92:29       1|1:100:84
+2      20692407        rs934600        C       G       .       PASS    AA=G;DP=149     GT:GQ:DP        1|1:100:40      1|1:92:30       1|1:100:80
+9      106755310       rs2105257       C       T       .       PASS    AA=T;DP=155     GT:GQ:DP        1|1:100:40      1|1:98:32       1|1:100:86
+13     24683941        rs58845081      T       C       .       PASS    AA=C;DP=166     GT:GQ:DP        1|1:100:41      0|0:100:34      1|0:100:48
+3      101657576       .       A       G       .       PASS    AA=A;DP=121     GT:GQ:DP        1|1:100:41      0|0:42:14       1|0:100:65
+19     19315828        rs2965193       G       A       .       PASS    AA=G;DP=124     GT:GQ:DP        1|1:100:41      0|0:42:14       1|0:100:69
+1      50595460        rs11576814      G       A       .       PASS    AA=G;DP=132     GT:GQ:DP        1|1:100:41      0|0:42:15       1|0:100:76
+11     12249674        rs7122932       T       A       .       PASS    AA=A;DP=155     GT:GQ:DP        1|1:100:41      0|0:48:17       1|0:100:87
+12     54023670        rs7314118       A       C       .       PASS    AA=N;DP=131     GT:GQ:DP        1|1:100:41      0|0:49:21       1|0:100:68
+12     104654122       .       T       C       .       PASS    AA=T;DP=123     GT:GQ:DP        1|1:100:41      0|0:51:19       1|0:100:64
+15     22362122        rs12915177      T       A       .       PASS    AA=t;DP=125     GT:GQ:DP        1|1:100:41      0|0:57:19       1|0:100:65
+18     46617080        rs2847578       T       C       .       PASS    AA=C;DP=132     GT:GQ:DP        1|1:100:41      0|0:63:21       1|0:100:70
+13     73233015        rs9600165       C       T       .       PASS    AA=T;DP=149     GT:GQ:DP        1|1:100:41      0|0:65:33       1|0:100:71
+15     79123824        rs11636846      C       T       .       PASS    AA=C;DP=139     GT:GQ:DP        1|1:100:41      0|0:66:23       1|0:100:74
+5      167966660       rs158911        C       T       .       PASS    AA=c;DP=139     GT:GQ:DP        1|1:100:41      0|0:69:23       1|0:100:72
+6      138180528       rs17066895      G       A       .       PASS    AA=G;DP=171     GT:GQ:DP        1|1:100:41      0|0:69:25       1|0:100:59
+20     41318214        rs58542185      G       A       .       PASS    AA=G;DP=149     GT:GQ:DP        1|1:100:41      0|0:72:24       1|0:100:87
+3      113246469       rs774778        T       C       .       PASS    AA=C;DP=127     GT:GQ:DP        1|1:100:41      0|0:78:26       1|0:100:65
+9      7221343 rs7022149       A       G       .       PASS    AA=A;DP=162     GT:GQ:DP        1|1:100:41      0|0:81:30       1|0:100:90
+1      234199137       rs12066313      G       A       .       PASS    AA=G;DP=153;HM2 GT:GQ:DP        1|1:100:41      0|0:84:28       1|0:100:84
+10     30318242        rs4747695       T       C       .       PASS    AA=C;DP=156     GT:GQ:DP        1|1:100:41      0|0:93:31       1|0:100:81
+9      107079629       rs328006        G       C       .       PASS    AA=C;DP=150     GT:GQ:DP        1|1:100:41      0|0:93:33       1|0:100:80
+4      104230516       rs746829        A       G       .       PASS    AA=G;DP=150     GT:GQ:DP        1|1:100:41      0|0:99:34       1|0:100:77
+1      163797963       rs437919        G       A       .       PASS    AA=A;DP=172;HM2 GT:GQ:DP        1|1:100:41      0|1:100:23      1|0:100:60
+2      70801798        rs7569739       C       G       .       PASS    AA=C;DP=149     GT:GQ:DP        1|1:100:41      0|1:100:25      1|0:100:38
+12     130228171       rs10773856      T       G       .       PASS    AA=G;DP=156     GT:GQ:DP        1|1:100:41      0|1:100:25      1|0:100:90
+3      23531305        rs6776424       G       A       .       PASS    AA=A;DP=132     GT:GQ:DP        1|1:100:41      0|1:100:26      1|0:100:66
+8      96358267        rs6984009       C       T       .       PASS    AA=C;DP=155     GT:GQ:DP        1|1:100:41      0|1:100:32      1|0:100:84
+12     1839894 rs10774001      C       T       .       PASS    AA=T;DP=141     GT:GQ:DP        1|1:100:41      0|1:75:20       1|0:100:82
+16     27473559        rs6498030       G       T       .       PASS    AA=G;DP=134     GT:GQ:DP        1|1:100:41      0|1:77:24       1|0:100:72
+7      66637885        rs4718592       T       C       .       PASS    AA=T;DP=113     GT:GQ:DP        1|1:100:41      1|0:100:22      1|1:80:53
+13     33275605        rs7322757       C       T       .       PASS    AA=T;DP=146     GT:GQ:DP        1|1:100:41      1|0:100:29      1|1:100:78
+1      34953222        rs565935        G       A       .       PASS    AA=G;DP=150     GT:GQ:DP        1|1:100:41      1|0:100:32      1|1:100:77
+5      137004070       rs6862903       T       G       .       PASS    AA=T;DP=156     GT:GQ:DP        1|1:100:41      1|0:100:32      1|1:100:81
+7      129777371       rs6957041       A       G       .       PASS    AA=G;DP=157     GT:GQ:DP        1|1:100:41      1|0:92:25       1|1:100:93
+5      65943943        rs4128347       A       G       .       PASS    AA=G;DP=135     GT:GQ:DP        1|1:100:41      1|0:96:21       1|1:100:71
+20     29729313        rs6060644       G       A       .       PASS    AA=G;DP=144     GT:GQ:DP        1|1:100:41      1|1:100:33      1|1:100:69
+4      91581909        rs7662374       C       G       .       PASS    AA=G;DP=156     GT:GQ:DP        1|1:100:41      1|1:100:34      1|1:100:80
+5      112703923       rs10067046      C       G       .       PASS    AA=A;DP=151     GT:GQ:DP        1|1:100:41      1|1:100:40      1|1:100:73
+12     68560427        rs1240287       G       A       .       PASS    AA=A;DP=129     GT:GQ:DP        1|1:100:41      1|1:44:13       1|1:100:70
+17     3584664 rs220465        C       T       .       PASS    AA=T;DP=128     GT:GQ:DP        1|1:100:41      1|1:46:22       1|1:100:65
+12     52474449        rs10506318      T       G       .       PASS    AA=T;DP=126     GT:GQ:DP        1|1:100:41      1|1:47:14       1|1:100:71
+9      33211478        rs494104        G       A       .       PASS    AA=A;DP=111     GT:GQ:DP        1|1:100:41      1|1:47:15       1|1:100:50
+2      179933958       rs7422210       T       A       .       PASS    AA=A;DP=119     GT:GQ:DP        1|1:100:41      1|1:50:16       1|1:100:62
+5      38626308        rs1562136       T       C       .       PASS    AA=C;DP=121     GT:GQ:DP        1|1:100:41      1|1:50:16       1|1:100:63
+1      44479882        rs1738050       G       C       .       PASS    AA=C;DP=123;HM2 GT:GQ:DP        1|1:100:41      1|1:53:16       1|1:100:66
+5      165399325       rs10057613      G       A       .       PASS    AA=A;DP=127     GT:GQ:DP        1|1:100:41      1|1:53:16       1|1:100:67
+5      153591778       rs6883578       G       A       .       PASS    AA=A;DP=125     GT:GQ:DP        1|1:100:41      1|1:53:25       1|1:100:60
+7      32221594        rs6462345       A       C       .       PASS    AA=C;DP=153     GT:GQ:DP        1|1:100:41      1|1:54:29       1|1:100:83
+8      131423273       rs11786705      G       A       .       PASS    AA=A;DP=105     GT:GQ:DP        1|1:100:41      1|1:56:17       1|1:100:31
+13     102269779       rs9554899       G       A       .       PASS    AA=A;DP=143     GT:GQ:DP        1|1:100:41      1|1:56:22       1|1:100:78
+8      29415511        rs4732961       T       C       .       PASS    AA=T;DP=125     GT:GQ:DP        1|1:100:41      1|1:57:26       1|1:100:45
+17     59211046        rs9906247       T       C       .       PASS    AA=C;DP=141     GT:GQ:DP        1|1:100:41      1|1:59:18       1|1:100:83
+6      75548849        rs6932549       C       T       .       PASS    AA=T;DP=140     GT:GQ:DP        1|1:100:41      1|1:59:19       1|1:100:80
+1      211485310       rs9430119       A       G       .       PASS    AA=G;DP=119;HM2 GT:GQ:DP        1|1:100:41      1|1:60:24       1|1:100:53
+9      83409377        rs815854        T       A       .       PASS    AA=A;DP=141     GT:GQ:DP        1|1:100:41      1|1:62:19       1|1:100:79
+17     1468295 rs9911948       A       T       .       PASS    AA=T;DP=143     GT:GQ:DP        1|1:100:41      1|1:62:19       1|1:100:85
+3      23053379        rs1817581       T       A       .       PASS    AA=A;DP=125     GT:GQ:DP        1|1:100:41      1|1:65:20       1|1:100:64
+12     10345763        rs1600130       A       G       .       PASS    AA=A;DP=138     GT:GQ:DP        1|1:100:41      1|1:65:21       1|1:100:71
+1      203182016       rs2595960       A       G       .       PASS    AA=a;DP=145;HM2;HM3     GT:GQ:DP        1|1:100:41      1|1:65:21       1|1:100:85
+11     85684403        rs1215001       C       T       .       PASS    AA=T;DP=128     GT:GQ:DP        1|1:100:41      1|1:68:21       1|1:100:67
+13     109058000       rs7320497       G       C       .       PASS    AA=C;DP=136     GT:GQ:DP        1|1:100:41      1|1:68:21       1|1:100:72
+16     52351583        rs62048378      C       T       .       PASS    AA=C;DP=145     GT:GQ:DP        1|1:100:41      1|1:68:21       1|1:100:84
+6      37771602        rs9349050       T       C       .       PASS    AA=C;DP=159     GT:GQ:DP        1|1:100:41      1|1:71:22       1|1:100:94
+2      30830577        rs485100        G       A       .       PASS    AA=A;DP=145     GT:GQ:DP        1|1:100:41      1|1:71:28       1|1:100:76
+10     65409860        rs2671544       A       G       .       PASS    AA=G;DP=143     GT:GQ:DP        1|1:100:41      1|1:74:24       1|1:100:81
+18     8658673 rs507507        G       A       .       PASS    AA=A;DP=134     GT:GQ:DP        1|1:100:41      1|1:77:32       1|1:100:63
+16     70790497        rs9931993       C       A       .       PASS    AA=A;DP=109     GT:GQ:DP        1|1:100:41      1|1:80:25       1|1:100:35
+3      185891464       rs7653710       C       T       .       PASS    AA=C;DP=148     GT:GQ:DP        1|1:100:41      1|1:80:25       1|1:100:78
+20     1073036 rs6077895       A       T       .       PASS    AA=T;DP=132     GT:GQ:DP        1|1:100:41      1|1:80:26       1|1:100:58
+5      76164809        rs631465        T       C       .       PASS    AA=C;DP=163     GT:GQ:DP        1|1:100:41      1|1:86:28       1|1:100:90
+8      11270270        rs13260727      G       A       .       PASS    AA=A;DP=138     GT:GQ:DP        1|1:100:41      1|1:89:28       1|1:100:70
+20     931670  rs6056532       C       T       .       PASS    AA=T;DP=148     GT:GQ:DP        1|1:100:41      1|1:89:28       1|1:100:78
+6      44909560        rs604511        G       A       .       PASS    AA=A;DP=144     GT:GQ:DP        1|1:100:41      1|1:89:28       1|1:100:79
+18     8934079 rs28464782      T       C       .       PASS    AA=C;DP=157     GT:GQ:DP        1|1:100:41      1|1:92:29       1|1:100:88
+22     32038680        rs130250        T       C       .       PASS    AA=t;DP=160     GT:GQ:DP        1|1:100:41      1|1:95:32       1|1:100:88
+20     5352034 rs6076832       C       T       .       PASS    AA=C;DP=163     GT:GQ:DP        1|1:100:42      0|0:100:35      1|0:100:84
+4      9898972 rs11937220      T       C       .       PASS    AA=T;DP=145     GT:GQ:DP        1|1:100:42      0|0:54:18       1|0:100:88
+7      153156213       rs2622182       C       T       .       PASS    AA=c;DP=144     GT:GQ:DP        1|1:100:42      0|0:54:19       1|0:100:82
+8      131638263       rs58798878      A       G       .       PASS    AA=A;DP=143     GT:GQ:DP        1|1:100:42      0|0:66:23       1|0:100:82
+15     48007690        rs7175764       T       C       .       PASS    AA=C;DP=153     GT:GQ:DP        1|1:100:42      0|0:75:25       1|0:100:87
+4      140907901       rs6818154       C       T       .       PASS    AA=C;DP=130     GT:GQ:DP        1|1:100:42      0|0:81:27       1|0:100:59
+4      185502578       rs793881        A       G       .       PASS    AA=G;DP=153     GT:GQ:DP        1|1:100:42      0|0:81:31       1|0:100:80
+12     1489701 rs10773950      A       G       .       PASS    AA=A;DP=162     GT:GQ:DP        1|1:100:42      0|0:84:29       1|0:100:95
+3      129420335       rs9847576       A       G       .       PASS    AA=A;DP=147     GT:GQ:DP        1|1:100:42      0|0:87:29       1|0:100:76
+5      13832743        rs1502050       T       C       .       PASS    AA=C;DP=141     GT:GQ:DP        1|1:100:42      0|1:100:17      1|0:100:82
+3      145268456       rs34379944      G       A       .       PASS    AA=A;DP=146     GT:GQ:DP        1|1:100:42      0|1:100:24      1|0:100:84
+6      134717166       rs6924392       A       T       .       PASS    AA=T;DP=119     GT:GQ:DP        1|1:100:42      0|1:100:25      1|0:100:54
+13     31217503        rs960712        A       T       .       PASS    AA=T;DP=157     GT:GQ:DP        1|1:100:42      0|1:100:26      1|0:100:89
+5      33529554        rs4867514       A       G       .       PASS    AA=G;DP=157     GT:GQ:DP        1|1:100:42      0|1:100:30      1|0:100:86
+10     23254722        rs10466083      A       C       .       PASS    AA=C;DP=156     GT:GQ:DP        1|1:100:42      0|1:100:33      1|0:100:80
+15     46726473        rs6493334       A       T       .       PASS    AA=A;DP=175     GT:GQ:DP        1|1:100:42      0|1:100:33      1|0:100:86
+20     45835186        rs6094835       A       G       .       PASS    AA=G;DP=140     GT:GQ:DP        1|1:100:42      0|1:37:19       1|0:100:80
+1      244762452       rs3124101       A       G       .       PASS    AA=G;DP=157     GT:GQ:DP        1|1:100:42      0|1:91:25       1|0:100:88
+9      128281645       rs1537989       G       A       .       PASS    AA=A;DP=152     GT:GQ:DP        1|1:100:42      1|0:100:20      1|1:100:91
+9      29303174        .       G       A       .       PASS    AA=A;DP=128     GT:GQ:DP        1|1:100:42      1|0:100:22      1|1:100:63
+13     55719561        rs9597372       T       A       .       PASS    AA=T;DP=153     GT:GQ:DP        1|1:100:42      1|0:100:23      1|1:100:83
+2      102966048       rs56814534      T       A       .       PASS    AA=A;DP=142     GT:GQ:DP        1|1:100:42      1|0:100:24      1|1:100:77
+15     43171957        rs7180106       G       T       .       PASS    AA=T;DP=159     GT:GQ:DP        1|1:100:42      1|0:100:28      1|1:100:86
+7      121701163       .       T       C       .       PASS    AA=T;DP=125     GT:GQ:DP        1|1:100:42      1|0:56:21       1|1:100:64
+19     875131  rs350136        C       T       .       PASS    AA=C;DP=117     GT:GQ:DP        1|1:100:42      1|0:62:8        1|1:100:56
+22     41357768        rs6002829       T       C       .       PASS    AA=C;DP=133     GT:GQ:DP        1|1:100:42      1|0:66:17       1|1:100:75
+8      21610298        rs4237071       C       T       .       PASS    AA=T;DP=148     GT:GQ:DP        1|1:100:42      1|0:67:21       1|1:100:84
+1      79662932        rs3000095       G       A       .       PASS    AA=A;DP=128;HM3 GT:GQ:DP        1|1:100:42      1|0:90:27       1|1:100:50
+18     21615292        rs7235649       A       G       .       PASS    AA=G;DP=150     GT:GQ:DP        1|1:100:42      1|0:96:34       1|1:100:75
+16     7684483 rs2215281       A       G       .       PASS    AA=G;DP=151     GT:GQ:DP        1|1:100:42      1|1:100:34      1|1:100:64
+2      178347391       rs1438043       C       G       .       PASS    AA=G;DP=146     GT:GQ:DP        1|1:100:42      1|1:100:39      1|1:100:65
+11     68899054        rs11263593      T       C       .       PASS    AA=C;DP=118     GT:GQ:DP        1|1:100:42      1|1:32:9        1|1:100:68
+1      19194568        rs2013108       T       G       .       PASS    AA=G;DP=117     GT:GQ:DP        1|1:100:42      1|1:33:12       1|1:100:52
+2      174452562       rs4972612       A       C       .       PASS    AA=C;DP=141     GT:GQ:DP        1|1:100:42      1|1:41:19       1|1:100:78
+18     5961039 rs570168        C       A       .       PASS    AA=A;DP=154     GT:GQ:DP        1|1:100:42      1|1:41:23       1|1:100:73
+9      100320181       rs2808567       A       C       .       PASS    AA=C;DP=117     GT:GQ:DP        1|1:100:42      1|1:44:13       1|1:100:61
+17     33746729        rs4312356       C       T       .       PASS    AA=T;DP=135     GT:GQ:DP        1|1:100:42      1|1:47:15       1|1:100:78
+7      75790148        rs2961037       G       T       .       PASS    AA=T;DP=137     GT:GQ:DP        1|1:100:42      1|1:50:15       1|1:100:78
+9      16067511        rs7042667       T       C       .       PASS    AA=T;DP=153     GT:GQ:DP        1|1:100:42      1|1:50:23       1|1:100:88
+17     60538940        rs299827        A       G       .       PASS    AA=G;DP=131     GT:GQ:DP        1|1:100:42      1|1:50:26       1|1:100:64
+9      103830765       rs3012613       G       T       .       PASS    AA=G;DP=132     GT:GQ:DP        1|1:100:42      1|1:53:17       1|1:100:72
+17     71213997        rs820229        T       C       .       PASS    AA=C;DP=169     GT:GQ:DP        1|1:100:42      1|1:56:17       1|1:100:61
+14     66216826        rs4294753       A       C       .       PASS    AA=C;DP=143     GT:GQ:DP        1|1:100:42      1|1:59:29       1|1:100:70
+17     73258403        rs4486972       A       G       .       PASS    AA=G;DP=116     GT:GQ:DP        1|1:100:42      1|1:62:20       1|1:100:54
+12     119682682       rs668622        G       A       .       PASS    AA=A;DP=161     GT:GQ:DP        1|1:100:42      1|1:62:20       1|1:100:58
+10     65439569        rs2671502       T       C       .       PASS    AA=C;DP=127     GT:GQ:DP        1|1:100:42      1|1:62:20       1|1:100:65
+8      57714118        rs1863330       T       C       .       PASS    AA=T;DP=133     GT:GQ:DP        1|1:100:42      1|1:62:20       1|1:100:73
+4      111287099       rs4146696       A       G       .       PASS    AA=G;DP=119     GT:GQ:DP        1|1:100:42      1|1:65:20       1|1:100:57
+14     77342379        rs8011337       T       G       .       PASS    AA=t;DP=129     GT:GQ:DP        1|1:100:42      1|1:65:20       1|1:100:67
+11     47337739        rs4752985       T       C       .       PASS    AA=C;DP=133     GT:GQ:DP        1|1:100:42      1|1:65:21       1|1:100:70
+1      22298596        rs2865179       T       C       .       PASS    AA=t;DP=131;HM2 GT:GQ:DP        1|1:100:42      1|1:65:23       1|1:100:67
+7      154513733       rs1657276       C       A       .       PASS    AA=C;DP=141     GT:GQ:DP        1|1:100:42      1|1:68:22       1|1:100:76
+6      6688148 rs1294421       T       G       .       PASS    AA=G;DP=154     GT:GQ:DP        1|1:100:42      1|1:74:23       1|1:100:90
+10     34617553        rs665070        T       C       .       PASS    AA=t;DP=137     GT:GQ:DP        1|1:100:42      1|1:77:24       1|1:100:69
+5      9756906 rs41478 A       G       .       PASS    AA=G;DP=147     GT:GQ:DP        1|1:100:42      1|1:77:24       1|1:100:82
+7      22828503        rs4354222       G       A       .       PASS    AA=A;DP=149     GT:GQ:DP        1|1:100:42      1|1:77:25       1|1:100:83
+1      85316775        rs10493759      C       T       .       PASS    AA=C;DP=136;HM2 GT:GQ:DP        1|1:100:42      1|1:80:26       1|1:100:69
+2      207961026       rs4675668       G       A       .       PASS    AA=A;DP=143     GT:GQ:DP        1|1:100:42      1|1:80:27       1|1:100:80
+1      112506116       rs2788423       A       G       .       PASS    AA=G;DP=132;HM2 GT:GQ:DP        1|1:100:42      1|1:80:31       1|1:100:58
+16     47442971        rs3103012       T       C       .       PASS    AA=C;DP=125     GT:GQ:DP        1|1:100:42      1|1:85:34       1|1:100:43
+5      159985857       rs7730932       T       C       .       PASS    AA=C;DP=146     GT:GQ:DP        1|1:100:42      1|1:86:30       1|1:100:73
+15     54851747        rs7172572       G       A       .       PASS    AA=G;DP=155     GT:GQ:DP        1|1:100:42      1|1:89:29       1|1:100:85
+8      76669483        rs2943572       C       T       .       PASS    AA=t;DP=154     GT:GQ:DP        1|1:100:42      1|1:95:31       1|1:100:82
+6      110729282       rs9481054       G       C       .       PASS    AA=C;DP=155     GT:GQ:DP        1|1:100:42      1|1:98:32       1|1:100:81
+3      45939963        rs6800954       C       T       .       PASS    AA=C;DP=173     GT:GQ:DP        1|1:100:43      0|0:100:39      1|0:100:91
+5      10098188        .       G       A       .       PASS    AA=G;DP=134     GT:GQ:DP        1|1:100:43      0|0:60:20       1|0:100:70
+6      154159332       rs11155934      C       G       .       PASS    AA=G;DP=132     GT:GQ:DP        1|1:100:43      0|0:60:24       1|0:100:68
+16     20131255        rs59476607      A       G       .       PASS    AA=G;DP=149     GT:GQ:DP        1|1:100:43      0|1:100:27      1|0:100:79
+19     44622899        rs2353678       G       C       .       PASS    AA=C;DP=154     GT:GQ:DP        1|1:100:43      0|1:100:31      1|0:100:83
+8      103814632       rs2436866       G       A       .       PASS    AA=A;DP=147     GT:GQ:DP        1|1:100:43      0|1:100:32      1|0:100:71
+17     4277696 rs4239046       T       A       .       PASS    AA=A;DP=148     GT:GQ:DP        1|1:100:43      0|1:92:25       1|0:100:83
+2      130449  rs300708        A       G       .       PASS    AA=G;DP=123     GT:GQ:DP        1|1:100:43      1|0:100:18      1|1:100:60
+2      65660531        rs1641488       C       T       .       PASS    AA=C;DP=128     GT:GQ:DP        1|1:100:43      1|0:100:21      1|1:100:65
+5      142054123       rs4912876       A       G       .       PASS    AA=G;DP=163     GT:GQ:DP        1|1:100:43      1|0:100:23      1|1:100:52
+22     43786797        rs5766288       T       C       .       PASS    AA=C;DP=166     GT:GQ:DP        1|1:100:43      1|0:100:30      1|1:100:94
+13     33485422        rs7982543       G       A       .       PASS    AA=A;DP=143     GT:GQ:DP        1|1:100:43      1|0:100:32      1|1:100:69
+7      51491026        rs61437499      G       C       .       PASS    AA=G;DP=155     GT:GQ:DP        1|1:100:43      1|0:59:29       1|1:100:80
+7      77567423        rs3807737       C       T       .       PASS    AA=T;DP=155     GT:GQ:DP        1|1:100:43      1|0:68:22       1|1:100:89
+11     5714694 rs7396766       A       C       .       PASS    AA=C;DP=181     GT:GQ:DP        1|1:100:43      1|1:100:34      1|1:100:102
+6      158473099       rs827674        G       A       .       PASS    AA=G;DP=152     GT:GQ:DP        1|1:100:43      1|1:32:20       1|1:100:49
+6      105123615       rs1361188       C       T       .       PASS    AA=C;DP=131     GT:GQ:DP        1|1:100:43      1|1:43:18       1|1:100:71
+17     52098605        rs1003543       A       G       .       PASS    AA=G;DP=135     GT:GQ:DP        1|1:100:43      1|1:53:16       1|1:100:77
+8      128827861       rs7003472       C       G       .       PASS    AA=G;DP=145     GT:GQ:DP        1|1:100:43      1|1:53:18       1|1:100:85
+19     56733103        rs1870070       A       G       .       PASS    AA=N;DP=123     GT:GQ:DP        1|1:100:43      1|1:59:18       1|1:100:61
+11     60651068        rs2186409       G       T       .       PASS    AA=T;DP=123     GT:GQ:DP        1|1:100:43      1|1:62:19       1|1:100:52
+10     76881918        rs4746297       A       G       .       PASS    AA=G;DP=134     GT:GQ:DP        1|1:100:43      1|1:65:20       1|1:100:66
+2      28710098        rs6721990       T       C       .       PASS    AA=C;DP=130     GT:GQ:DP        1|1:100:43      1|1:65:20       1|1:100:69
+9      99702200        rs7027221       T       C       .       PASS    AA=t;DP=131     GT:GQ:DP        1|1:100:43      1|1:65:21       1|1:100:69
+4      153827453       rs12332054      G       T       .       PASS    AA=T;DP=172     GT:GQ:DP        1|1:100:43      1|1:66:32       1|1:100:57
+1      155861937       rs2252180       T       C       .       PASS    AA=C;DP=143     GT:GQ:DP        1|1:100:43      1|1:68:23       1|1:100:76
+16     25579880        rs2910845       C       T       .       PASS    AA=T;DP=140     GT:GQ:DP        1|1:100:43      1|1:71:22       1|1:100:80
+4      22432749        rs358227        A       G       .       PASS    AA=G;DP=146     GT:GQ:DP        1|1:100:43      1|1:71:22       1|1:100:83
+10     27929824        rs1494201       C       T       .       PASS    AA=T;DP=133     GT:GQ:DP        1|1:100:43      1|1:71:28       1|1:100:64
+11     111107530       rs524703        A       G       .       PASS    AA=G;DP=158     GT:GQ:DP        1|1:100:43      1|1:74:23       1|1:100:90
+18     33117940        rs55908446      T       A       .       PASS    AA=A;DP=146     GT:GQ:DP        1|1:100:43      1|1:77:24       1|1:100:83
+8      126648755       rs1020649       C       T       .       PASS    AA=T;DP=154     GT:GQ:DP        1|1:100:43      1|1:77:24       1|1:100:89
+10     97274071        rs1326934       C       T       .       PASS    AA=C;DP=162     GT:GQ:DP        1|1:100:43      1|1:80:27       1|1:100:89
+20     16064408        rs2760548       T       A       .       PASS    AA=A;DP=144     GT:GQ:DP        1|1:100:43      1|1:86:27       1|1:100:74
+21     37978210        rs1709803       G       A       .       PASS    AA=A;DP=147     GT:GQ:DP        1|1:100:43      1|1:86:27       1|1:100:78
+5      16710289        rs676852        C       T       .       PASS    AA=C;DP=139     GT:GQ:DP        1|1:100:43      1|1:86:28       1|1:100:70
+5      80534135        rs6883756       C       T       .       PASS    AA=T;DP=153     GT:GQ:DP        1|1:100:43      1|1:92:29       1|1:100:80
+8      15424261        rs62502546      C       T       .       PASS    AA=C;DP=122     GT:GQ:DP        1|1:100:44      0|0:65:24       1|0:100:54
+13     42729365        rs1444626       T       C       .       PASS    AA=T;DP=150     GT:GQ:DP        1|1:100:44      0|1:100:23      1|0:100:40
+2      109191499       rs11893925      A       G       .       PASS    AA=A;DP=173     GT:GQ:DP        1|1:100:44      0|1:100:35      1|0:100:54
+2      39264165        rs7595102       T       C       .       PASS    AA=C;DP=164     GT:GQ:DP        1|1:100:44      0|1:100:35      1|0:100:84
+3      3990109 rs317572        G       A       .       PASS    AA=G;DP=135     GT:GQ:DP        1|1:100:44      1|0:100:16      1|1:100:77
+14     19648837        rs1888369       T       C       .       PASS    AA=T;DP=142     GT:GQ:DP        1|1:100:44      1|0:100:31      1|1:100:61
+3      15326969        rs6793635       C       T       .       PASS    AA=T;DP=167     GT:GQ:DP        1|1:100:44      1|0:100:36      1|1:100:87
+2      219658354       rs1378642       G       C       .       PASS    AA=C;DP=131     GT:GQ:DP        1|1:100:44      1|0:44:22       1|1:100:54
+13     112751405       rs7330238       C       T       .       PASS    AA=C;DP=141     GT:GQ:DP        1|1:100:44      1|0:65:15       1|1:100:82
+14     23204937        rs12886719      C       T       .       PASS    AA=T;DP=138     GT:GQ:DP        1|1:100:44      1|0:74:24       1|1:100:68
+17     11285340        rs2969184       T       G       .       PASS    AA=G;DP=145     GT:GQ:DP        1|1:100:44      1|1:100:33      1|1:100:70
+8      12664797        rs6530972       T       G       .       PASS    AA=t;DP=157     GT:GQ:DP        1|1:100:44      1|1:100:38      1|1:100:74
+6      6436487 rs1535706       C       A       .       PASS    AA=C;DP=114     GT:GQ:DP        1|1:100:44      1|1:12:11       1|1:100:59
+16     58085567        rs60249757      T       G       .       PASS    AA=g;DP=151     GT:GQ:DP        1|1:100:44      1|1:33:24       1|1:100:83
+7      25987552        rs12532058      G       A       .       PASS    AA=G;DP=124     GT:GQ:DP        1|1:100:44      1|1:44:14       1|1:100:68
+9      91525959        rs10737179      T       C       .       PASS    AA=C;DP=124     GT:GQ:DP        1|1:100:44      1|1:50:15       1|1:100:57
+18     44304862        rs4939777       A       G       .       PASS    AA=a;DP=150     GT:GQ:DP        1|1:100:44      1|1:51:19       1|1:100:46
+16     55196735        rs2161737       A       G       .       PASS    AA=T;DP=151     GT:GQ:DP        1|1:100:44      1|1:57:23       1|1:100:84
+5      58642457        rs255650        A       C       .       PASS    AA=C;DP=133     GT:GQ:DP        1|1:100:44      1|1:59:20       1|1:100:67
+1      180760388       rs569000        A       T       .       PASS    AA=T;DP=160;HM2 GT:GQ:DP        1|1:100:44      1|1:63:25       1|1:100:53
+9      92740851        rs291749        G       C       .       PASS    AA=G;DP=136     GT:GQ:DP        1|1:100:44      1|1:65:21       1|1:100:71
+13     29657683        rs631832        G       A       .       PASS    AA=A;DP=151     GT:GQ:DP        1|1:100:44      1|1:65:21       1|1:100:87
+16     19248750        rs8063892       C       T       .       PASS    AA=T;DP=132     GT:GQ:DP        1|1:100:44      1|1:65:26       1|1:100:62
+1      207795213       rs10746420      T       C       .       PASS    AA=C;DP=150;HM2;HM3     GT:GQ:DP        1|1:100:44      1|1:68:28       1|1:100:83
+13     79641199        rs482161        C       T       .       PASS    AA=T;DP=169     GT:GQ:DP        1|1:100:44      1|1:71:22       1|1:100:66
+3      133240262       rs1950079       A       G       .       PASS    AA=A;DP=132     GT:GQ:DP        1|1:100:44      1|1:71:23       1|1:100:70
+21     15060034        rs2822912       G       A       .       PASS    AA=A;DP=144     GT:GQ:DP        1|1:100:44      1|1:74:23       1|1:100:74
+1      25202365        rs311466        T       C       .       PASS    AA=C;DP=137;HM3 GT:GQ:DP        1|1:100:44      1|1:74:27       1|1:100:70
+15     32905006        .       A       G       .       PASS    AA=A;DP=159     GT:GQ:DP        1|1:100:44      1|1:80:26       1|1:100:91
+1      212874424       rs2666830       A       G       .       PASS    AA=G;DP=147     GT:GQ:DP        1|1:100:44      1|1:83:27       1|1:100:76
+2      40248796        rs379556        C       A       .       PASS    AA=A;DP=181     GT:GQ:DP        1|1:100:44      1|1:94:37       1|1:100:101
+14     88774473        rs8005433       A       G       .       PASS    AA=G;DP=154     GT:GQ:DP        1|1:100:44      1|1:98:31       1|1:100:80
+8      128610275       rs4242386       C       T       .       PASS    AA=T;DP=144     GT:GQ:DP        1|1:100:44      1|1:98:32       1|1:100:70
+12     547862  rs2535411       G       A       .       PASS    AA=G;DP=140     GT:GQ:DP        1|1:100:45      0|0:38:19       1|0:100:79
+5      10671257        rs59019270      C       T       .       PASS    AA=C;DP=151     GT:GQ:DP        1|1:100:45      0|0:39:13       1|0:100:54
+15     37072281        rs56288884      G       A       .       PASS    AA=g;DP=121     GT:GQ:DP        1|1:100:45      0|0:51:18       1|0:100:58
+19     38848239        rs12462965      T       C       .       PASS    AA=C;DP=129     GT:GQ:DP        1|1:100:45      0|0:66:24       1|0:100:59
+7      149698612       rs3757424       C       A       .       PASS    AA=A;DP=159     GT:GQ:DP        1|1:100:45      0|0:81:27       1|0:100:80
+14     104445094       rs1595948       C       G       .       PASS    AA=G;DP=152     GT:GQ:DP        1|1:100:45      0|1:100:25      1|0:100:81
+8      135553065       rs6994619       T       C       .       PASS    AA=T;DP=165     GT:GQ:DP        1|1:100:45      0|1:100:26      1|0:100:53
+12     12345529        rs10772549      A       G       .       PASS    AA=G;DP=153     GT:GQ:DP        1|1:100:45      0|1:100:27      1|0:100:82
+12     5428779 rs10774331      C       T       .       PASS    AA=T;DP=151     GT:GQ:DP        1|1:100:45      0|1:100:32      1|0:100:76
+10     126100697       rs2807075       G       C       .       PASS    AA=C;DP=135     GT:GQ:DP        1|1:100:45      1|0:100:25      1|1:100:64
+1      23321770        rs1571466       T       C       .       PASS    AA=C;DP=134;HM2;HM3     GT:GQ:DP        1|1:100:45      1|0:100:26      1|1:100:63
+7      31661769        rs1860540       C       T       .       PASS    AA=C;DP=147     GT:GQ:DP        1|1:100:45      1|0:100:34      1|1:100:69
+15     46377033        rs12050648      A       T       .       PASS    AA=A;DP=154     GT:GQ:DP        1|1:100:45      1|1:100:35      1|1:100:73
+11     128098703       rs947930        G       A       .       PASS    AA=A;DP=156     GT:GQ:DP        1|1:100:45      1|1:100:36      1|1:100:77
+10     15606030        rs4750668       G       A       .       PASS    AA=A;DP=145     GT:GQ:DP        1|1:100:45      1|1:47:14       1|1:100:84
+8      9172607 rs330029        A       G       .       PASS    AA=a;DP=132     GT:GQ:DP        1|1:100:45      1|1:53:16       1|1:100:70
+2      106028124       rs7561017       C       T       .       PASS    AA=T;DP=137     GT:GQ:DP        1|1:100:45      1|1:56:17       1|1:100:68
+6      166020073       rs9365906       T       C       .       PASS    AA=T;DP=140     GT:GQ:DP        1|1:100:45      1|1:56:17       1|1:100:81
+13     109861529       rs7338965       C       T       .       PASS    AA=N;DP=119     GT:GQ:DP        1|1:100:45      1|1:56:18       1|1:100:55
+18     73457397        rs165140        C       G       .       PASS    AA=G;DP=173     GT:GQ:DP        1|1:100:45      1|1:58:24       1|1:100:107
+1      173510752       rs10798373      T       G       .       PASS    AA=G;DP=112     GT:GQ:DP        1|1:100:45      1|1:59:19       1|1:100:41
+2      191698781       rs4594474       C       T       .       PASS    AA=T;DP=146     GT:GQ:DP        1|1:100:45      1|1:66:27       1|1:100:75
+8      39448748        rs6474149       T       C       .       PASS    AA=N;DP=149     GT:GQ:DP        1|1:100:45      1|1:68:21       1|1:100:82
+1      38933186        rs1930575       C       G       .       PASS    AA=G;DP=139;HM2 GT:GQ:DP        1|1:100:45      1|1:68:22       1|1:100:73
+20     47881687        rs6020073       T       C       .       PASS    AA=.;DP=165     GT:GQ:DP        1|1:100:45      1|1:68:22       1|1:100:95
+9      37979697        rs1928232       G       A       .       PASS    AA=A;DP=147     GT:GQ:DP        1|1:100:45      1|1:68:23       1|1:100:81
+18     2019100 rs6505993       G       A       .       PASS    AA=A;DP=119     GT:GQ:DP        1|1:100:45      1|1:71:23       1|1:100:51
+9      113919551       rs9409114       C       T       .       PASS    AA=T;DP=144     GT:GQ:DP        1|1:100:45      1|1:80:26       1|1:100:75
+6      39299757        rs2815120       C       A       .       PASS    AA=A;DP=164     GT:GQ:DP        1|1:100:45      1|1:83:26       1|1:100:46
+1      159030977       rs535106        G       A       .       PASS    AA=A;DP=163     GT:GQ:DP        1|1:100:45      1|1:83:26       1|1:100:75
+3      196743561       rs823508        A       G       .       PASS    AA=G;DP=169     GT:GQ:DP        1|1:100:45      1|1:89:30       1|1:100:59
+11     71481766        rs693391        C       A       .       PASS    AA=A;DP=160     GT:GQ:DP        1|1:100:45      1|1:96:38       1|1:100:79
+5      134579761       rs11242235      T       C       .       PASS    AA=T;DP=165     GT:GQ:DP        1|1:100:46      0|1:100:24      1|0:100:46
+17     67868248        rs9302948       T       C       .       PASS    AA=C;DP=137     GT:GQ:DP        1|1:100:46      0|1:90:18       1|0:100:74
+15     97278385        rs10048024      A       G       .       PASS    AA=G;DP=137     GT:GQ:DP        1|1:100:46      1|0:100:24      1|1:100:54
+14     39801831        rs1955558       C       T       .       PASS    AA=T;DP=173     GT:GQ:DP        1|1:100:46      1|0:100:41      1|1:100:45
+21     42866873        rs445554        A       G       .       PASS    AA=A;DP=174     GT:GQ:DP        1|1:100:46      1|1:100:37      1|1:100:95
+3      106795162       rs10933826      T       C       .       PASS    AA=C;DP=135     GT:GQ:DP        1|1:100:46      1|1:46:19       1|1:100:59
+1      232941774       rs2587537       A       G       .       PASS    AA=G;DP=138     GT:GQ:DP        1|1:100:46      1|1:51:21       1|1:100:71
+1      5215271 .       A       C       .       PASS    AA=C;DP=157     GT:GQ:DP        1|1:100:46      1|1:65:20       1|1:100:44
+9      90039252        rs1550284       C       A       .       PASS    AA=A;DP=133     GT:GQ:DP        1|1:100:46      1|1:65:20       1|1:100:68
+12     66642472        rs6581784       A       G       .       PASS    AA=G;DP=156     GT:GQ:DP        1|1:100:46      1|1:89:31       1|1:100:74
+8      28406672        rs1946583       T       C       .       PASS    AA=C;DP=164     GT:GQ:DP        1|1:100:46      1|1:95:31       1|1:100:90
+5      149161559       rs4705382       C       T       .       PASS    AA=c;DP=141     GT:GQ:DP        1|1:100:47      0|1:100:18      1|0:100:77
+1      205316923       rs1060286       G       A       .       PASS    AA=A;DP=144;HM2;HM3     GT:GQ:DP        1|1:100:47      0|1:100:23      1|0:100:75
+12     94034491        rs7977572       A       G       .       PASS    AA=A;DP=149     GT:GQ:DP        1|1:100:47      0|1:100:26      1|0:100:77
+10     63980539        rs1955334       G       A       .       PASS    AA=g;DP=151     GT:GQ:DP        1|1:100:47      0|1:100:27      1|0:100:33
+14     71596403        rs4902982       T       C       .       PASS    AA=T;DP=159     GT:GQ:DP        1|1:100:47      1|0:100:22      1|1:100:90
+4      154221972       rs2406230       G       C       .       PASS    AA=G;DP=145     GT:GQ:DP        1|1:100:47      1|0:70:17       1|1:100:78
+5      125719531       rs2112481       T       G       .       PASS    AA=G;DP=161     GT:GQ:DP        1|1:100:47      1|1:100:35      1|1:100:81
+18     18963121        rs8093542       A       C       .       PASS    AA=C;DP=161     GT:GQ:DP        1|1:100:47      1|1:49:26       1|1:100:88
+4      4479784 rs4348043       A       G       .       PASS    AA=A;DP=122     GT:GQ:DP        1|1:100:47      1|1:56:18       1|1:100:57
+12     97202247        rs1383137       T       G       .       PASS    AA=G;DP=156     GT:GQ:DP        1|1:100:47      1|1:60:30       1|1:100:78
+3      126210437       rs4395444       A       G       .       PASS    AA=A;DP=150     GT:GQ:DP        1|1:100:47      1|1:71:22       1|1:100:81
+16     4689719 rs841213        A       G       .       PASS    AA=G;DP=138     GT:GQ:DP        1|1:100:47      1|1:71:23       1|1:100:63
+9      88773599        rs7019409       A       G       .       PASS    AA=G;DP=150     GT:GQ:DP        1|1:100:47      1|1:83:27       1|1:100:78
+2      45618121        rs56352438      A       C       .       PASS    AA=C;DP=181     GT:GQ:DP        1|1:100:48      0|1:100:30      1|0:100:54
+11     117228269       rs4537792       G       A       .       PASS    AA=A;DP=149     GT:GQ:DP        1|1:100:48      1|0:52:27       1|1:100:73
+10     89957645        rs645516        T       C       .       PASS    AA=T;DP=161     GT:GQ:DP        1|1:100:48      1|0:92:19       1|1:100:94
+8      126884170       rs12548448      G       A       .       PASS    AA=A;DP=148     GT:GQ:DP        1|1:100:48      1|1:40:21       1|1:100:78
+4      4245623 rs2980116       C       T       .       PASS    AA=.;DP=144     GT:GQ:DP        1|1:100:48      1|1:80:25       1|1:100:73
+6      138818055       rs17067621      T       C       .       PASS    AA=C;DP=155     GT:GQ:DP        1|1:100:49      0|1:100:31      1|0:100:76
+6      166779280       rs2281062       C       T       .       PASS    AA=T;DP=131     GT:GQ:DP        1|1:100:49      1|0:83:19       1|1:100:65
+12     51555070        rs2638511       T       C       .       PASS    AA=t;DP=151     GT:GQ:DP        1|1:100:49      1|1:53:16       1|1:100:86
+10     94494774        rs2488070       G       A       .       PASS    AA=A;DP=163     GT:GQ:DP        1|1:100:49      1|1:68:21       1|1:100:46
+9      36770684        rs2812323       T       G       .       PASS    AA=A;DP=150     GT:GQ:DP        1|1:100:49      1|1:71:24       1|1:100:75
+16     70082644        rs7188342       T       C       .       PASS    AA=C;DP=156     GT:GQ:DP        1|1:100:49      1|1:89:29       1|1:100:80
+2      127380958       rs12475273      A       G       .       PASS    AA=C;DP=136     GT:GQ:DP        1|1:100:50      0|0:57:21       1|0:100:65
+1      173610025       rs2236879       G       A       .       PASS    AA=G;DP=171;HM3 GT:GQ:DP        1|1:100:50      0|0:90:30       1|0:100:91
+16     84136524        rs4843463       T       G       .       PASS    AA=T;DP=163     GT:GQ:DP        1|1:100:50      0|1:96:26       1|0:100:85
+9      31115210        rs10758015      G       A       .       PASS    AA=G;DP=162     GT:GQ:DP        1|1:100:50      1|0:100:19      1|1:100:93
+2      118758549       rs6542441       C       T       .       PASS    AA=T;DP=161     GT:GQ:DP        1|1:100:50      1|0:100:28      1|1:100:85
+12     90632130        rs1387764       C       A       .       PASS    AA=A;DP=126     GT:GQ:DP        1|1:100:50      1|0:87:18       1|1:100:57
+7      157194105       rs1638764       T       C       .       PASS    AA=C;DP=157     GT:GQ:DP        1|1:100:50      1|1:56:17       1|1:100:88
+15     51061783        rs1501021       C       T       .       PASS    AA=C;DP=137     GT:GQ:DP        1|1:100:51      0|0:57:20       1|0:100:64
+11     3826411 rs10835194      T       C       .       PASS    AA=C;DP=172     GT:GQ:DP        1|1:100:51      1|1:58:29       1|1:100:91
+18     41992577        rs6507675       A       G       .       PASS    AA=N;DP=140     GT:GQ:DP        1|1:100:51      1|1:59:21       1|1:100:67
+17     44217084        rs10468570      G       A       .       PASS    AA=G;DP=147     GT:GQ:DP        1|1:100:52      1|1:62:19       1|1:100:77
+13     113007805       rs9549736       G       A       .       PASS    AA=A;DP=165     GT:GQ:DP        1|1:100:52      1|1:74:29       1|1:100:84
+8      29376100        rs4732951       T       G       .       PASS    AA=G;DP=155     GT:GQ:DP        1|1:100:53      1|1:81:36       1|1:100:66
+18     7265559 rs6506491       C       T       .       PASS    AA=T;DP=163     GT:GQ:DP        1|1:100:55      1|1:92:29       1|1:100:81
+10     46511513        rs6599582       A       G       .       PASS    AA=A;DP=168     GT:GQ:DP        1|1:100:56      0|1:100:15      1|0:100:98
+8      43750902        rs10087935      A       G       .       PASS    AA=.;DP=130     GT:GQ:DP        1|1:100:56      0|1:100:28      1|0:100:48
+X      77600289        rs60301941      A       C       .       PASS    AA=A;DP=76      GT:GQ:DP        1|1:10:10       0|0:54:18       1|0:100:27
+X      27728442        .       T       C       .       PASS    AA=t;DP=82      GT:GQ:DP        1|1:10:10       0|0:75:25       1|0:71:26
+X      108118576       rs6567877       T       G       .       PASS    AA=t;DP=69      GT:GQ:DP        1|1:10:11       1|0:72:20       1|1:54:18
+4      136895680       rs9307748       G       A       .       PASS    AA=A;DP=67      GT:GQ:DP        1|1:10:12       0|1:44:15       1|0:100:36
+7      8756970 rs17154768      A       G       .       PASS    AA=A;DP=73      GT:GQ:DP        1|1:10:13       0|0:48:16       1|0:100:44
+X      74196766        .       A       T       .       PASS    AA=A;DP=74      GT:GQ:DP        1|1:10:13       1|0:100:20      1|1:45:15
+4      32661024        rs60761518      T       C       .       PASS    AA=T;DP=85      GT:GQ:DP        1|1:10:13       1|0:19:17       1|1:96:55
+X      120181217       rs12007035      T       G       .       PASS    AA=G;DP=78      GT:GQ:DP        1|1:10:14       0|0:54:19       1|0:100:28
+21     17643611        rs8126888       C       T       .       PASS    AA=T;DP=118     GT:GQ:DP        1|1:10:18       0|1:76:17       1|0:100:76
+2      134347906       rs6430467       G       T       .       PASS    AA=G;DP=79      GT:GQ:DP        1|1:10:20       1|0:72:20       1|1:75:37
+1      207202417       rs2761784       T       G       .       PASS    AA=N;DP=87      GT:GQ:DP        1|1:10:25       1|1:18:22       1|1:100:31
+2      94901299        rs4854235       C       T       .       PASS    AA=c;DP=110     GT:GQ:DP        1|1:10:35       0|1:35:13       1|0:100:53
+11     55245953        rs28889072      G       A       .       PASS    AA=G;DP=83      GT:GQ:DP        1|1:10:4        0|1:86:19       1|0:100:62
+X      27161918        rs58636818      T       C       .       PASS    AA=T;DP=75      GT:GQ:DP        1|1:10:4        0|1:89:25       1|0:100:30
+X      30670973        rs5926951       G       A       .       PASS    AA=A;DP=84      GT:GQ:DP        1|1:10:6        1|1:18:24       1|1:77:36
+X      79356251        rs6621857       T       C       .       PASS    AA=t;DP=83      GT:GQ:DP        1|1:10:7        1|0:76:31       1|1:81:28
+X      72128396        rs4269698       C       G       .       PASS    AA=g;DP=88      GT:GQ:DP        1|1:10:9        1|1:64:28       1|1:79:39
+X      87294860        rs5969460       T       C       .       PASS    AA=.;DP=112     GT:GQ:DP        1|1:10:9        1|1:85:28       1|1:100:41
+X      47572477        rs1207484       T       G       .       PASS    AA=t;DP=73      GT:GQ:DP        1|1:11:10       1|1:23:20       1|1:100:33
+4      138390736       rs13104120      T       C       .       PASS    AA=t;DP=100     GT:GQ:DP        1|1:11:13       0|1:48:19       1|0:100:59
+X      10124106        rs5934808       A       G       .       PASS    AA=G;DP=77      GT:GQ:DP        1|1:11:13       1|1:40:18       1|1:47:23
+6      63272731        rs9360503       G       A       .       PASS    AA=-;DP=58      GT:GQ:DP        1|1:11:14       0|1:60:11       1|0:97:25
+9      75360140        rs446776        A       G       .       PASS    AA=G;DP=79      GT:GQ:DP        1|1:11:14       1|0:100:15      1|1:100:52
+X      79049069        rs5959614       A       G       .       PASS    AA=A;DP=70      GT:GQ:DP        1|1:11:14       1|0:44:15       1|1:10:23
+X      116145801       rs6646796       G       C       .       PASS    AA=C;DP=105     GT:GQ:DP        1|1:11:15       0|0:54:18       1|0:100:30
+3      82093977        rs9818589       G       A       .       PASS    AA=G;DP=102     GT:GQ:DP        1|1:11:17       0|1:100:29      1|0:100:54
+7      38507473        rs2392579       A       G       .       PASS    AA=G;DP=98      GT:GQ:DP        1|1:11:19       0|0:34:22       1|0:100:43
+X      88914777        rs2771729       G       A       .       PASS    AA=.;DP=63      GT:GQ:DP        1|1:11:2        1|1:70:22       1|1:100:33
+3      83963166        rs4261890       G       C       .       PASS    AA=C;DP=99      GT:GQ:DP        1|1:11:20       0|0:36:23       1|0:100:42
+1      203143765       rs2802838       T       C       .       PASS    AA=C;DP=100     GT:GQ:DP        1|1:11:21       1|0:100:27      1|1:71:51
+21     22853316        rs2088844       A       C       .       PASS    AA=A;DP=110     GT:GQ:DP        1|1:11:26       1|1:22:26       1|1:90:57
+7      158319126       rs4044343       A       G       .       PASS    AA=N;DP=114     GT:GQ:DP        1|1:11:32       0|1:10:25       1|0:15:61
+X      141359186       .       A       T       .       PASS    AA=A;DP=98      GT:GQ:DP        1|1:11:6        0|0:69:23       1|0:100:24
+X      40174006        .       C       G       .       PASS    AA=C;DP=88      GT:GQ:DP        1|1:12:11       0|0:61:32       1|0:100:33
+X      50130981        .       G       A       .       PASS    AA=G;DP=115     GT:GQ:DP        1|1:12:11       1|0:75:28       1|1:93:43
+X      53771217        rs2012944       G       A       .       PASS    AA=G;DP=57      GT:GQ:DP        1|1:12:11       1|1:17:12       1|1:80:23
+X      150934399       rs2472362       T       G       .       PASS    AA=G;DP=106     GT:GQ:DP        1|1:12:11       1|1:32:29       1|1:100:45
+3      146842221       rs60520380      T       C       .       PASS    AA=C;DP=105     GT:GQ:DP        1|1:12:11       1|1:70:22       1|1:100:75
+15     38960498        rs8024961       A       C       .       PASS    AA=A;DP=82      GT:GQ:DP        1|1:12:13       0|1:28:12       1|0:100:56
+X      146403553       rs609033        T       G       .       PASS    AA=t;DP=88      GT:GQ:DP        1|1:12:15       0|0:63:21       1|0:100:32
+15     92340414        .       C       T       .       PASS    AA=C;DP=83      GT:GQ:DP        1|1:12:17       0|0:47:22       1|0:100:45
+3      80673629        rs10865584      C       T       .       PASS    AA=T;DP=94      GT:GQ:DP        1|1:12:24       1|1:8:18        1|1:55:52
+X      126322183       rs2627606       G       A       .       PASS    AA=.;DP=59      GT:GQ:DP        1|1:12:5        0|1:76:18       1|0:100:20
+X      142394859       rs11096052      C       G       .       PASS    AA=G;DP=76      GT:GQ:DP        1|1:12:6        0|1:100:20      1|0:100:29
+X      63984177        .       C       A       .       PASS    AA=-;DP=115     GT:GQ:DP        1|1:12:9        0|1:72:20       1|0:100:46
+X      137916367       rs565127        C       T       .       PASS    AA=T;DP=96      GT:GQ:DP        1|1:13:12       1|1:79:25       1|1:100:29
+18     62638170        rs10163820      C       T       .       PASS    AA=T;DP=95      GT:GQ:DP        1|1:13:15       1|0:56:33       1|1:99:46
+14     55922571        rs10143110      C       T       .       PASS    AA=C;DP=68      GT:GQ:DP        1|1:13:15       1|0:78:14       1|1:75:31
+X      136470725       rs5975950       T       C       .       PASS    AA=T;DP=100     GT:GQ:DP        1|1:13:16       0|0:66:22       1|0:100:25
+14     84247056        rs1383790       C       T       .       PASS    AA=C;DP=82      GT:GQ:DP        1|1:13:16       0|1:7:11        1|0:8:52
+11     18419051        .       A       G       .       PASS    AA=G;DP=75      GT:GQ:DP        1|1:13:20       0|0:45:15       1|0:100:29
+5      52586064        .       T       G       .       PASS    AA=T;DP=66      GT:GQ:DP        1|1:13:24       0|0:20:12       1|0:100:29
+X      116332490       .       G       C       .       PASS    AA=G;DP=79      GT:GQ:DP        1|1:13:6        0|0:39:13       1|0:100:28
+X      74457632        rs6647695       A       T       .       PASS    AA=A;DP=80      GT:GQ:DP        1|1:13:6        0|0:41:25       1|0:100:25
+X      28759272        .       G       A       .       PASS    AA=G;DP=83      GT:GQ:DP        1|1:13:6        0|0:47:27       1|0:75:26
+X      75841822        rs61138200      G       C       .       PASS    AA=.;DP=92      GT:GQ:DP        1|1:13:6        0|0:63:21       1|0:100:24
+X      26232402        .       G       A       .       PASS    AA=A;DP=94      GT:GQ:DP        1|1:13:7        0|0:72:24       1|0:100:33
+X      8589104 rs5933675       G       C       .       PASS    AA=C;DP=85      GT:GQ:DP        1|1:14:13       1|1:29:23       1|1:100:39
+3      3470488 rs9870666       T       A       .       PASS    AA=T;DP=70      GT:GQ:DP        1|1:14:13       1|1:43:13       1|1:100:31
+12     15051250        rs2445425       A       G       .       PASS    AA=G;DP=94      GT:GQ:DP        1|1:14:13       1|1:52:17       1|1:100:61
+21     23753887        rs1354484       A       C       .       PASS    AA=C;DP=71      GT:GQ:DP        1|1:14:13       1|1:55:17       1|1:98:29
+1      206964906       rs12093844      G       A       .       PASS    AA=a;DP=73;HM2  GT:GQ:DP        1|1:14:14       1|0:100:22      1|1:47:35
+X      14102248        .       T       A       .       PASS    AA=T;DP=141     GT:GQ:DP        1|1:14:17       0|0:44:26       1|0:100:58
+X      47225842        rs6609519       T       A       .       PASS    AA=T;DP=95      GT:GQ:DP        1|1:14:17       0|0:63:23       1|0:100:41
+9      107267417       rs2771041       A       T       .       PASS    AA=T;DP=118     GT:GQ:DP        1|1:14:17       0|0:78:26       1|0:100:76
+X      128212363       rs6634723       G       T       .       PASS    AA=G;DP=112     GT:GQ:DP        1|1:14:17       0|0:90:30       1|0:100:47
+X      57134977        rs5914893       A       G       .       PASS    AA=A;DP=115     GT:GQ:DP        1|1:15:12       0|1:87:23       1|0:100:41
+5      111793064       rs10061487      A       G       .       PASS    AA=G;DP=125     GT:GQ:DP        1|1:15:16       1|0:97:26       1|1:100:81
+6      32697388        rs9271508       C       T       .       PASS    AA=C;DP=102     GT:GQ:DP        1|1:15:17       0|0:3:15        1|0:100:68
+6      84147409        rs1361784       A       T       .       PASS    AA=T;DP=104     GT:GQ:DP        1|1:15:17       0|0:51:17       1|0:100:71
+9      137061774       rs7046195       C       A       .       PASS    AA=C;DP=66      GT:GQ:DP        1|1:15:18       0|0:24:8        1|0:100:36
+7      99117072        rs776741        A       G       .       PASS    AA=N;DP=110     GT:GQ:DP        1|1:15:25       0|0:69:23       1|0:100:61
+X      143920648       rs5919789       T       A       .       PASS    AA=T;DP=75      GT:GQ:DP        1|1:15:5        1|0:100:15      1|1:84:28
+X      137073998       rs4829933       T       A       .       PASS    AA=T;DP=68      GT:GQ:DP        1|1:15:5        1|0:94:20       1|1:44:21
+X      131009889       rs5930541       T       C       .       PASS    AA=C;DP=83      GT:GQ:DP        1|1:15:6        0|1:26:22       1|0:100:27
+X      121505518       rs4825460       A       G       .       PASS    AA=A;DP=82      GT:GQ:DP        1|1:15:6        0|1:78:15       1|0:100:31
+X      97318260        rs12689502      G       A       .       PASS    AA=G;DP=73      GT:GQ:DP        1|1:15:6        1|0:33:20       1|1:84:30
+X      143169037       rs1115547       A       G       .       PASS    AA=G;DP=74      GT:GQ:DP        1|1:15:9        1|1:52:19       1|1:100:29
+12     3190844 rs11062571      C       T       .       PASS    AA=T;DP=85      GT:GQ:DP        1|1:16:12       0|0:54:18       1|0:100:56
+X      53175498        rs4830349       G       T       .       PASS    AA=T;DP=81      GT:GQ:DP        1|1:16:12       1|1:71:22       1|1:85:23
+X      129486016       rs3007752       T       G       .       PASS    AA=G;DP=73      GT:GQ:DP        1|1:16:13       1|0:18:13       1|1:68:29
+X      27270164        rs4240090       G       T       .       PASS    AA=N;DP=80      GT:GQ:DP        1|1:16:14       1|1:36:12       1|1:73:31
+7      125523870       rs985114        G       T       .       PASS    AA=T;DP=89      GT:GQ:DP        1|1:16:14       1|1:41:19       1|1:100:57
+X      80628000        rs5959892       G       C       .       PASS    AA=C;DP=102     GT:GQ:DP        1|1:16:14       1|1:56:21       1|1:100:34
+X      88073737        rs658834        T       C       .       PASS    AA=T;DP=79      GT:GQ:DP        1|1:16:14       1|1:59:18       1|1:79:21
+X      31334829        rs2692989       T       C       .       PASS    AA=C;DP=93      GT:GQ:DP        1|1:16:14       1|1:74:24       1|1:100:32
+X      22326578        rs4366194       A       T       .       PASS    AA=T;DP=102     GT:GQ:DP        1|1:16:14       1|1:83:26       1|1:100:31
+9      9128847 rs4742564       T       G       .       PASS    AA=T;DP=83      GT:GQ:DP        1|1:16:17       0|1:100:21      1|0:100:47
+11     107858474       rs7932489       A       G       .       PASS    AA=G;DP=94      GT:GQ:DP        1|1:16:18       1|1:33:14       1|1:25:64
+6      53581000        rs489584        G       A       .       PASS    AA=A;DP=89      GT:GQ:DP        1|1:16:20       1|0:100:22      1|1:77:47
+6      83803256        rs1981189       T       C       .       PASS    AA=C;DP=74      GT:GQ:DP        1|1:16:24       0|1:38:19       1|0:100:27
+1      111488020       rs325925        A       C       .       PASS    AA=C;DP=100     GT:GQ:DP        1|1:16:24       1|1:32:20       1|1:100:45
+18     6766591 rs9675676       C       T       .       PASS    AA=T;DP=106     GT:GQ:DP        1|1:16:25       0|1:85:21       1|0:100:59
+2      233082822       rs1190459       A       T       .       PASS    AA=A;DP=85      GT:GQ:DP        1|1:16:32       0|1:54:15       1|0:19:33
+X      45204548        rs12014621      T       C       .       PASS    AA=T;DP=56      GT:GQ:DP        1|1:16:7        0|0:33:12       1|0:100:21
+X      20490906        rs1461560       G       A       .       PASS    AA=G;DP=96      GT:GQ:DP        1|1:16:7        0|0:48:17       1|0:100:30
+X      68259902        rs5937155       C       T       .       PASS    AA=C;DP=84      GT:GQ:DP        1|1:16:7        0|0:48:18       1|0:100:33
+X      83677095        rs2064119       T       A       .       PASS    AA=A;DP=76      GT:GQ:DP        1|1:16:7        0|0:51:17       1|0:100:25
+X      126680474       rs5932128       T       C       .       PASS    AA=t;DP=87      GT:GQ:DP        1|1:16:7        0|0:54:18       1|0:100:26
+X      96588564        rs4294321       T       C       .       PASS    AA=T;DP=64      GT:GQ:DP        1|1:16:7        0|0:57:19       1|0:100:19
+X      142273441       rs1883319       G       C       .       PASS    AA=G;DP=96      GT:GQ:DP        1|1:16:7        0|0:69:23       1|0:100:33
+X      140896917       rs7050923       G       A       .       PASS    AA=G;DP=91      GT:GQ:DP        1|1:16:8        1|0:75:23       1|1:90:30
+11     129327697       rs35618147      T       C       .       PASS    AA=C;DP=90      GT:GQ:DP        1|1:16:8        1|1:83:27       1|1:96:53
+X      56962671        .       T       C       .       PASS    AA=T;DP=90      GT:GQ:DP        1|1:17:11       0|1:71:21       1|0:89:36
+8      5057581 rs10435675      C       G       .       PASS    AA=G;DP=73      GT:GQ:DP        1|1:17:14       0|1:72:16       1|0:100:42
+X      152779003       rs59465229      T       C       .       PASS    AA=N;DP=93      GT:GQ:DP        1|1:17:14       1|1:74:23       1|1:100:32
+X      93463021        rs5990538       A       G       .       PASS    AA=a;DP=104     GT:GQ:DP        1|1:17:15       0|0:93:31       1|0:100:28
+7      33047819        rs2392212       G       T       .       PASS    AA=T;DP=69      GT:GQ:DP        1|1:17:16       0|1:5:10        1|0:5:45
+14     80546590        rs28410717      T       C       .       PASS    AA=T;DP=70      GT:GQ:DP        1|1:17:18       0|0:54:18       1|0:100:23
+X      14893602        .       G       A       .       PASS    AA=-;DP=108     GT:GQ:DP        1|1:17:18       0|0:69:23       1|0:100:42
+2      238265046       .       A       G       .       PASS    AA=G;DP=69      GT:GQ:DP        1|1:17:18       0|0:6:8 1|0:100:35
+4      140293489       rs10001095      G       C       .       PASS    AA=C;DP=83      GT:GQ:DP        1|1:17:18       1|1:22:23       1|1:77:42
+13     68964445        rs4540954       C       T       .       PASS    AA=T;DP=81      GT:GQ:DP        1|1:17:18       1|1:44:14       1|1:100:49
+10     55203943        rs1343018       T       C       .       PASS    AA=C;DP=102     GT:GQ:DP        1|1:17:19       1|1:53:16       1|1:100:63
+5      172399958       rs10051892      C       G       .       PASS    AA=G;DP=101     GT:GQ:DP        1|1:17:23       1|0:100:18      1|1:100:60
+8      78908373        rs6995503       G       A       .       PASS    AA=G;DP=132     GT:GQ:DP        1|1:17:29       0|0:99:33       1|0:100:69
+X      22705899        rs727441        G       A       .       PASS    AA=A;DP=77      GT:GQ:DP        1|1:17:4        1|1:80:25       1|1:100:35
+X      109279060       .       A       G       .       PASS    AA=A;DP=69      GT:GQ:DP        1|1:18:11       1|0:100:20      1|1:48:19
+13     78855237        .       A       T       .       PASS    AA=T;DP=65      GT:GQ:DP        1|1:18:14       0|1:16:9        1|0:21:41
+4      55732444        rs10016809      C       A       .       PASS    AA=-;DP=61      GT:GQ:DP        1|1:18:15       1|1:23:7        1|1:100:30
+9      111228295       rs2418006       C       T       .       PASS    AA=T;DP=52      GT:GQ:DP        1|1:18:15       1|1:41:12       1|1:81:21
+7      14306150        rs6949535       G       T       .       PASS    AA=T;DP=89      GT:GQ:DP        1|1:18:15       1|1:74:23       1|1:100:39
+13     25833901        rs9512191       T       C       .       PASS    AA=C;DP=101     GT:GQ:DP        1|1:18:16       1|1:19:18       1|1:18:66
+4      83781410        .       G       A       .       PASS    AA=G;DP=92      GT:GQ:DP        1|1:18:17       0|0:81:27       1|0:100:48
+19     17197962        rs7255142       C       T       .       PASS    AA=C;DP=60      GT:GQ:DP        1|1:18:18       1|0:43:11       1|1:78:26
+11     108634440       rs10890979      G       T       .       PASS    AA=G;DP=102     GT:GQ:DP        1|1:18:19       0|1:52:19       1|0:100:65
+2      125327759       .       A       G       .       PASS    AA=A;DP=143     GT:GQ:DP        1|1:18:24       0|0:93:32       1|0:100:46
+1      161766294       rs2494218       T       C       .       PASS    AA=C;DP=68      GT:GQ:DP        1|1:18:24       1|1:20:7        1|1:100:32
+15     50210495        rs2435086       G       A       .       PASS    AA=A;DP=91      GT:GQ:DP        1|1:18:25       1|1:21:16       1|1:86:50
+2      223656388       rs2395948       C       A       .       PASS    AA=C;DP=92      GT:GQ:DP        1|1:18:29       1|1:10:14       1|1:99:42
+X      4909928 rs1448512       G       A       .       PASS    AA=a;DP=85      GT:GQ:DP        1|1:18:6        1|0:100:24      1|1:78:26
+X      152237465       rs6627779       A       G       .       PASS    AA=N;DP=53      GT:GQ:DP        1|1:18:6        1|0:16:16       1|1:63:21
+X      32454987        rs3805061       C       G       .       PASS    AA=G;DP=76      GT:GQ:DP        1|1:18:7        0|1:62:18       1|0:100:28
+X      150853084       rs5970166       C       G       .       PASS    AA=C;DP=73      GT:GQ:DP        1|1:18:7        0|1:78:14       1|0:100:22
+X      130564790       rs11096302      C       A       .       PASS    AA=C;DP=58      GT:GQ:DP        1|1:18:8        1|0:100:13      1|1:84:28
+X      108221728       rs5943211       T       C       .       PASS    AA=C;DP=78      GT:GQ:DP        1|1:18:9        1|1:40:18       1|1:96:26
+X      4235420 rs7057364       C       T       .       PASS    AA=.;DP=81      GT:GQ:DP        1|1:19:10       0|0:54:19       1|0:96:33
+X      146461133       rs1408093       A       G       .       PASS    AA=A;DP=103     GT:GQ:DP        1|1:19:13       0|0:78:27       1|0:100:30
+X      12138220        rs916765        A       C       .       PASS    AA=A;DP=110     GT:GQ:DP        1|1:19:14       0|0:27:20       1|0:100:43
+X      111486769       rs5982495       C       T       .       PASS    AA=T;DP=131     GT:GQ:DP        1|1:19:18       0|1:100:30      1|0:100:48
+21     19102011        .       A       G       .       PASS    AA=A;DP=67      GT:GQ:DP        1|1:19:18       0|1:25:7        1|0:21:38
+6      74542844        rs2118332       C       T       .       PASS    AA=C;DP=102     GT:GQ:DP        1|1:19:22       0|1:84:16       1|0:100:62
+15     67098450        rs311911        T       C       .       PASS    AA=C;DP=107     GT:GQ:DP        1|1:19:32       0|1:27:17       1|0:100:59
+X      147518549       .       A       C       .       PASS    AA=A;DP=70      GT:GQ:DP        1|1:19:8        0|0:30:10       1|0:100:30
+X      51568925        .       T       C       .       PASS    AA=T;DP=83      GT:GQ:DP        1|1:19:8        0|0:39:13       1|0:100:33
+X      114361291       rs5946299       T       G       .       PASS    AA=T;DP=105     GT:GQ:DP        1|1:19:8        0|0:50:28       1|0:100:30
+X      85819230        rs5923588       G       T       .       PASS    AA=G;DP=116     GT:GQ:DP        1|1:19:8        0|0:50:28       1|0:100:39
+X      138589624       rs7878896       A       C       .       PASS    AA=A;DP=85      GT:GQ:DP        1|1:19:8        0|0:63:21       1|0:100:36
+X      121159323       rs1937168       C       G       .       PASS    AA=g;DP=107     GT:GQ:DP        1|1:19:8        0|0:72:24       1|0:100:28
+X      32573299        rs16990527      T       C       .       PASS    AA=C;DP=94      GT:GQ:DP        1|1:19:8        0|0:72:25       1|0:100:32
+X      45614295        rs6609383       C       T       .       PASS    AA=C;DP=83      GT:GQ:DP        1|1:19:9        0|0:60:20       1|0:100:27
+X      104786606       rs656   T       C       .       PASS    AA=T;DP=75      GT:GQ:DP        1|1:19:9        0|0:69:24       1|0:57:15
+3      36240570        rs285304        T       C       .       PASS    AA=T;DP=73      GT:GQ:DP        1|1:20:10       1|1:68:21       1|1:100:44
+X      123905432       rs7054452       A       T       .       PASS    AA=A;DP=73      GT:GQ:DP        1|1:20:13       0|1:100:18      1|0:100:18
+4      61286463        rs4241637       C       T       .       PASS    AA=T;DP=73      GT:GQ:DP        1|1:20:13       0|1:100:18      1|0:100:42
+10     37080747        rs10764101      T       C       .       PASS    AA=C;DP=71      GT:GQ:DP        1|1:20:13       0|1:26:12       1|0:100:46
+6      32886400        rs9276796       G       T       .       PASS    AA=g;DP=58      GT:GQ:DP        1|1:20:13       1|1:59:18       1|1:89:23
+4      31757780        rs6814652       A       G       .       PASS    AA=N;DP=74      GT:GQ:DP        1|1:20:14       1|1:14:17       1|1:100:31
+5      51921413        .       G       A       .       PASS    AA=G;DP=99      GT:GQ:DP        1|1:20:15       0|0:45:17       1|0:100:67
+12     3732412 rs12302936      C       G       .       PASS    AA=N;DP=77      GT:GQ:DP        1|1:20:16       1|1:5:12        1|1:77:39
+9      105834604       rs1536894       T       C       .       PASS    AA=C;DP=75      GT:GQ:DP        1|1:20:17       0|0:22:18       1|0:100:28
+19     16976722        rs11086050      T       C       .       PASS    AA=T;DP=80      GT:GQ:DP        1|1:20:17       0|0:45:16       1|0:100:47
+1      114538029       rs449639        C       A       .       PASS    AA=C;DP=98      GT:GQ:DP        1|1:20:21       0|0:60:20       1|0:100:53
+4      15796088        rs317871        G       A       .       PASS    AA=A;DP=80      GT:GQ:DP        1|1:20:21       0|1:41:18       1|0:100:41
+3      29832257        rs6804210       A       C       .       PASS    AA=A;DP=97      GT:GQ:DP        1|1:20:21       1|0:76:22       1|1:86:52
+19     44472677        rs62122872      T       A       .       PASS    AA=A;DP=129     GT:GQ:DP        1|1:20:22       0|1:69:28       1|0:100:82
+14     74305499        .       T       A       .       PASS    AA=T;DP=96      GT:GQ:DP        1|1:20:23       0|1:55:30       1|0:5:43
+X      54887356        rs2207156       T       G       .       PASS    AA=N;DP=77      GT:GQ:DP        1|1:20:5        1|1:44:13       1|1:77:26
+X      27428907        rs5926788       T       C       .       PASS    AA=C;DP=81      GT:GQ:DP        1|1:20:5        1|1:47:14       1|1:100:36
+X      80696010        rs5913527       G       A       .       PASS    AA=N;DP=84      GT:GQ:DP        1|1:20:6        1|1:100:33      1|1:71:17
+15     53749649        rs2196774       C       T       .       PASS    AA=T;DP=64      GT:GQ:DP        1|1:21:10       1|1:62:19       1|1:96:25
+6      152984869       rs1744378       T       C       .       PASS    AA=T;DP=71      GT:GQ:DP        1|1:21:12       1|0:100:16      1|1:90:41
+18     27148632        rs4399610       C       T       .       PASS    AA=T;DP=86      GT:GQ:DP        1|1:21:12       1|1:29:19       1|1:100:57
+13     37459474        rs2251138       A       C       .       PASS    AA=C;DP=76      GT:GQ:DP        1|1:21:12       1|1:49:26       1|1:100:31
+10     118359193       rs7075196       T       C       .       PASS    AA=N;DP=67      GT:GQ:DP        1|1:21:16       1|1:32:10       1|1:100:34
+X      142911743       rs5908874       T       G       .       PASS    AA=G;DP=99      GT:GQ:DP        1|1:21:16       1|1:39:25       1|1:95:34
+2      1396251 rs2071403       A       G       .       PASS    AA=G;DP=93      GT:GQ:DP        1|1:21:16       1|1:50:15       1|1:100:62
+2      164362396       rs6741241       G       A       .       PASS    AA=A;DP=76      GT:GQ:DP        1|1:21:16       1|1:50:16       1|1:100:32
+7      9658616 rs6976326       T       A       .       PASS    AA=A;DP=76      GT:GQ:DP        1|1:21:17       1|1:59:18       1|1:100:31
+7      1391454 rs6463742       T       C       .       PASS    AA=C;DP=85      GT:GQ:DP        1|1:21:19       0|1:18:9        1|0:100:48
+5      74119473        rs6861730       G       A       .       PASS    AA=A;DP=90      GT:GQ:DP        1|1:21:19       0|1:43:18       1|0:100:51
+1      244799133       rs7547043       G       A       .       PASS    AA=G;DP=65      GT:GQ:DP        1|1:21:19       0|1:68:16       1|0:100:22
+17     61458520        rs9896949       C       A       .       PASS    AA=A;DP=103     GT:GQ:DP        1|1:21:19       0|1:89:19       1|0:100:66
+13     25900769        rs1576131       G       A       .       PASS    AA=A;DP=74      GT:GQ:DP        1|1:21:20       1|1:14:17       1|1:82:24
+11     58475950        rs1783530       T       G       .       PASS    AA=-;DP=122     GT:GQ:DP        1|1:21:21       1|0:100:20      1|1:34:71
+2      28417421        rs10169009      A       C       .       PASS    AA=C;DP=81      GT:GQ:DP        1|1:21:23       1|1:10:8        1|1:68:36
+X      85876034        rs1291758       G       A       .       PASS    AA=A;DP=69      GT:GQ:DP        1|1:21:7        1|0:100:17      1|1:69:23
+X      29672793        rs5928247       G       C       .       PASS    AA=C;DP=86      GT:GQ:DP        1|1:21:7        1|0:100:20      1|1:93:31
+X      140141275       rs1099501       G       A       .       PASS    AA=N;DP=64      GT:GQ:DP        1|1:21:7        1|0:38:11       1|1:63:21
+X      69721212        .       A       T       .       PASS    AA=a;DP=71      GT:GQ:DP        1|1:21:7        1|0:76:16       1|1:87:29
+X      145773095       rs6525767       T       G       .       PASS    AA=N;DP=49      GT:GQ:DP        1|1:21:7        1|0:99:16       1|1:51:17
+X      26720285        rs5943968       A       C       .       PASS    AA=C;DP=101     GT:GQ:DP        1|1:21:8        0|1:100:27      1|0:100:28
+X      121552595       rs1378088       T       C       .       PASS    AA=C;DP=115     GT:GQ:DP        1|1:21:8        0|1:100:30      1|0:100:40
+X      126420505       rs16997719      A       C       .       PASS    AA=.;DP=66      GT:GQ:DP        1|1:21:8        0|1:86:14       1|0:100:25
+11     55331839        rs2048232       G       C       .       PASS    AA=C;DP=110     GT:GQ:DP        1|1:21:8        0|1:98:32       1|0:100:69
+X      105710472       rs60252131      A       G       .       PASS    AA=a;DP=83      GT:GQ:DP        1|1:21:8        1|0:93:17       1|1:100:39
+X      140374955       rs5907947       T       A       .       PASS    AA=A;DP=66      GT:GQ:DP        1|1:21:9        0|1:100:17      1|0:100:21
+1      245781967       .       A       G       .       PASS    AA=A;DP=103     GT:GQ:DP        1|1:22:10       0|0:22:25       1|0:100:67
+X      77953129        rs4358925       A       G       .       PASS    AA=G;DP=120     GT:GQ:DP        1|1:22:10       0|0:72:25       1|0:100:45
+X      53021605        .       T       A       .       PASS    AA=t;DP=76      GT:GQ:DP        1|1:22:10       0|0:75:25       1|0:71:25
+X      83082875        rs5922006       A       C       .       PASS    AA=C;DP=70      GT:GQ:DP        1|1:22:11       1|1:56:19       1|1:94:24
+21     46309071        rs56127519      C       A       .       PASS    AA=A;DP=63      GT:GQ:DP        1|1:22:12       1|1:10:12       1|1:88:38
+6      131834381       rs2608926       T       G       .       PASS    AA=G;DP=97      GT:GQ:DP        1|1:22:14       1|1:35:19       1|1:100:59
+8      54028812        rs6995569       C       T       .       PASS    AA=C;DP=72      GT:GQ:DP        1|1:22:17       0|1:11:10       1|0:100:39
+15     42815319        rs935888        G       T       .       PASS    AA=G;DP=103     GT:GQ:DP        1|1:22:17       1|1:62:19       1|1:100:67
+6      82270041        rs1575196       G       T       .       PASS    AA=G;DP=110     GT:GQ:DP        1|1:22:18       0|0:45:19       1|0:100:74
+11     56328876        rs545736        A       G       .       PASS    AA=a;DP=83      GT:GQ:DP        1|1:22:18       1|0:100:15      1|1:97:49
+X      4330042 rs58380389      T       C       .       PASS    AA=.;DP=115     GT:GQ:DP        1|1:22:18       1|0:100:24      1|1:100:53
+1      105561575       rs6691987       T       C       .       PASS    AA=C;DP=75;HM2;HM3      GT:GQ:DP        1|1:22:20       0|0:54:18       1|0:100:37
+4      19401424        .       T       C       .       PASS    AA=T;DP=114     GT:GQ:DP        1|1:22:20       0|0:69:25       1|0:100:70
+13     88402687        rs7321728       A       T       .       PASS    AA=T;DP=84      GT:GQ:DP        1|1:22:20       1|1:62:21       1|1:100:43
+11     108051018       rs10890879      A       G       .       PASS    AA=A;DP=111     GT:GQ:DP        1|1:22:22       1|0:100:22      1|1:100:66
+X      38289009        rs9988373       A       G       .       PASS    AA=a;DP=56      GT:GQ:DP        1|1:22:6        1|1:13:12       1|1:81:23
+X      134305231       rs6635038       A       G       .       PASS    AA=A;DP=90      GT:GQ:DP        1|1:22:9        0|0:27:9        1|0:100:47
+X      78890349        .       T       G       .       PASS    AA=t;DP=97      GT:GQ:DP        1|1:22:9        0|0:36:12       1|0:100:26
+X      86526540        .       G       T       .       PASS    AA=G;DP=93      GT:GQ:DP        1|1:22:9        0|0:38:24       1|0:100:20
+X      74719292        rs6647769       C       A       .       PASS    AA=C;DP=65      GT:GQ:DP        1|1:22:9        0|0:42:14       1|0:100:31
+X      91027994        .       G       T       .       PASS    AA=T;DP=65      GT:GQ:DP        1|1:22:9        0|0:44:26       1|0:100:18
+X      111689173       .       G       T       .       PASS    AA=g;DP=63      GT:GQ:DP        1|1:22:9        0|0:45:15       1|0:100:26
+X      104183068       .       G       T       .       PASS    AA=N;DP=70      GT:GQ:DP        1|1:22:9        0|0:48:16       1|0:100:29
+X      40125757        rs58831841      A       G       .       PASS    AA=A;DP=91      GT:GQ:DP        1|1:22:9        0|0:48:16       1|0:100:30
+X      118131531       .       T       G       .       PASS    AA=G;DP=88      GT:GQ:DP        1|1:22:9        0|0:51:18       1|0:100:27
+X      81847747        rs7053366       T       C       .       PASS    AA=T;DP=73      GT:GQ:DP        1|1:22:9        0|0:54:18       1|0:100:24
+X      87637022        .       C       T       .       PASS    AA=c;DP=77      GT:GQ:DP        1|1:22:9        0|0:54:18       1|0:100:28
+X      45296136        .       A       C       .       PASS    AA=A;DP=91      GT:GQ:DP        1|1:22:9        0|0:54:18       1|0:100:31
+X      22957396        .       A       T       .       PASS    AA=a;DP=79      GT:GQ:DP        1|1:22:9        0|0:57:19       1|0:100:23
+X      72624090        rs7065172       G       A       .       PASS    AA=.;DP=81      GT:GQ:DP        1|1:22:9        0|0:59:27       1|0:100:29
+X      144107504       rs5966469       A       T       .       PASS    AA=A;DP=81      GT:GQ:DP        1|1:22:9        0|0:60:20       1|0:100:27
+X      72339661        rs2885666       T       C       .       PASS    AA=N;DP=68      GT:GQ:DP        1|1:22:9        0|0:60:21       1|0:100:23
+1      236815249       rs6670217       C       T       .       PASS    AA=C;DP=88;HM2  GT:GQ:DP        1|1:22:9        0|0:63:21       1|0:100:58
+X      141140329       rs57488300      G       A       .       PASS    AA=g;DP=84      GT:GQ:DP        1|1:22:9        0|0:63:24       1|0:100:25
+X      5288922 .       G       A       .       PASS    AA=G;DP=113     GT:GQ:DP        1|1:22:9        0|0:70:30       1|0:100:29
+X      147727712       .       A       G       .       PASS    AA=A;DP=83      GT:GQ:DP        1|1:22:9        0|0:72:26       1|0:100:31
+X      33132865        rs17339044      G       A       .       PASS    AA=G;DP=106     GT:GQ:DP        1|1:22:9        0|0:90:31       1|0:100:34
+21     40544932        rs2222978       A       C       .       PASS    AA=A;DP=93      GT:GQ:DP        1|1:23:11       1|1:34:23       1|1:100:59
+6      33145060        rs34140193      A       G       .       PASS    AA=G;DP=77      GT:GQ:DP        1|1:23:13       1|0:40:20       1|1:100:41
+6      162757567       rs6455827       A       G       .       PASS    AA=A;DP=92      GT:GQ:DP        1|1:23:13       1|1:56:18       1|1:100:61
+X      43686365        rs7887915       C       G       .       PASS    AA=C;DP=108     GT:GQ:DP        1|1:23:14       0|0:87:29       1|0:100:38
+6      23764304        rs6910572       A       C       .       PASS    AA=C;DP=89      GT:GQ:DP        1|1:23:14       0|1:100:24      1|0:100:53
+5      45570180        rs6451807       C       G       .       PASS    AA=G;DP=84      GT:GQ:DP        1|1:23:14       1|0:44:12       1|1:95:48
+6      141356307       rs2328161       T       G       .       PASS    AA=G;DP=95      GT:GQ:DP        1|1:23:16       1|1:50:15       1|1:100:62
+13     102519313       rs466802        G       A       .       PASS    AA=A;DP=93      GT:GQ:DP        1|1:23:16       1|1:65:20       1|1:100:54
+6      29053938        rs9368584       C       T       .       PASS    AA=C;DP=117     GT:GQ:DP        1|1:23:17       1|1:55:28       1|1:100:73
+X      16336165        rs1527073       T       G       .       PASS    AA=G;DP=114     GT:GQ:DP        1|1:23:19       1|1:66:26       1|1:100:44
+X      106082105       rs7892533       T       C       .       PASS    AA=T;DP=139     GT:GQ:DP        1|1:23:20       0|0:100:37      1|0:100:35
+6      126316491       rs7762011       C       T       .       PASS    AA=C;DP=86      GT:GQ:DP        1|1:23:20       0|0:39:13       1|0:100:44
+14     59337046        rs8007695       C       T       .       PASS    AA=T;DP=91      GT:GQ:DP        1|1:23:20       0|0:63:21       1|0:100:39
+3      32823976        rs11718759      A       T       .       PASS    AA=T;DP=92      GT:GQ:DP        1|1:23:21       0|0:63:21       1|0:100:51
+2      83502512        rs6733626       C       A       .       PASS    AA=A;DP=82      GT:GQ:DP        1|1:23:21       1|0:62:11       1|1:55:49
+4      113421144       .       A       G       .       PASS    AA=G;DP=97      GT:GQ:DP        1|1:23:36       1|1:14:15       1|1:100:46
+X      99842581        rs16983588      T       C       .       PASS    AA=t;DP=74      GT:GQ:DP        1|1:23:6        1|1:24:17       1|1:100:34
+1      234935144       rs10754581      A       T       .       PASS    AA=T;DP=60      GT:GQ:DP        1|1:23:6        1|1:38:11       1|1:100:39
+X      99078250        rs1381732       C       T       .       PASS    AA=T;DP=84      GT:GQ:DP        1|1:23:6        1|1:47:14       1|1:100:33
+X      87364354        rs5969515       G       A       .       PASS    AA=.;DP=91      GT:GQ:DP        1|1:23:6        1|1:47:16       1|1:100:32
+X      55493102        rs12688603      G       A       .       PASS    AA=G;DP=61      GT:GQ:DP        1|1:23:6        1|1:56:17       1|1:100:26
+X      22416782        rs5926064       A       G       .       PASS    AA=G;DP=109     GT:GQ:DP        1|1:23:6        1|1:71:24       1|1:99:37
+X      110156410       rs5943110       T       G       .       PASS    AA=T;DP=97      GT:GQ:DP        1|1:23:7        1|1:50:25       1|1:100:36
+5      23073622        rs2635640       C       T       .       PASS    AA=T;DP=60      GT:GQ:DP        1|1:24:10       0|1:89:15       1|0:100:24
+9      2467448 rs11791488      C       T       .       PASS    AA=T;DP=65      GT:GQ:DP        1|1:24:10       1|0:100:21      1|1:75:25
+8      23578397        rs7821330       C       T       .       PASS    AA=T;DP=90      GT:GQ:DP        1|1:24:15       0|0:66:23       1|0:100:51
+11     39552400        rs61887056      C       T       .       PASS    AA=T;DP=96      GT:GQ:DP        1|1:24:15       0|1:100:15      1|0:100:64
+X      138235255       .       G       C       .       PASS    AA=G;DP=148     GT:GQ:DP        1|1:24:16       0|0:75:30       1|0:100:59
+X      15744915        .       T       A       .       PASS    AA=T;DP=81      GT:GQ:DP        1|1:24:16       0|0:78:27       1|0:100:24
+X      114535933       rs6655310       C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        1|1:24:17       0|0:72:25       1|0:100:39
+4      40835557        rs2661663       T       A       .       PASS    AA=A;DP=64      GT:GQ:DP        1|1:24:17       1|1:38:11       1|1:100:36
+3      188236361       rs56906762      T       C       .       PASS    AA=T;DP=81      GT:GQ:DP        1|1:24:17       1|1:42:16       1|1:100:46
+17     73011759        rs440582        T       C       .       PASS    AA=C;DP=70      GT:GQ:DP        1|1:24:17       1|1:44:13       1|1:100:32
+7      143386785       rs2961119       T       C       .       PASS    AA=T;DP=89      GT:GQ:DP        1|1:24:17       1|1:47:14       1|1:100:51
+6      15058037        rs9396539       G       A       .       PASS    AA=A;DP=90      GT:GQ:DP        1|1:24:17       1|1:50:15       1|1:100:54
+9      30173916        rs2800341       T       C       .       PASS    AA=C;DP=80      GT:GQ:DP        1|1:24:17       1|1:71:23       1|1:100:30
+13     67813615        rs283501        A       T       .       PASS    AA=T;DP=71      GT:GQ:DP        1|1:24:18       1|1:41:12       1|1:99:41
+4      172639513       rs12505867      A       G       .       PASS    AA=A;DP=89      GT:GQ:DP        1|1:24:19       0|1:87:18       1|0:100:52
+3      3950933 rs2629163       C       A       .       PASS    AA=A;DP=77      GT:GQ:DP        1|1:24:19       1|0:49:14       1|1:75:47
+6      155089063       rs9397741       T       C       .       PASS    AA=C;DP=82      GT:GQ:DP        1|1:24:19       1|1:12:17       1|1:94:39
+5      1143364 rs4975663       A       G       .       PASS    AA=G;DP=89      GT:GQ:DP        1|1:24:20       0|1:25:13       1|0:100:55
+5      73707505        rs1393086       T       G       .       PASS    AA=T;DP=82      GT:GQ:DP        1|1:24:20       0|1:55:20       1|0:100:42
+15     83998244        rs338536        G       A       .       PASS    AA=G;DP=112     GT:GQ:DP        1|1:24:22       0|0:33:22       1|0:100:65
+5      151736632       rs56067715      T       G       .       PASS    AA=G;DP=106     GT:GQ:DP        1|1:24:22       0|1:100:20      1|0:100:59
+9      8784564 rs765802        C       G       .       PASS    AA=G;DP=70      GT:GQ:DP        1|1:24:23       1|1:33:12       1|1:64:25
+20     19685897        rs808716        A       G       .       PASS    AA=G;DP=101     GT:GQ:DP        1|1:24:23       1|1:68:21       1|1:65:58
+10     37007164        rs2779327       G       A       .       PASS    AA=G;DP=84      GT:GQ:DP        1|1:24:24       0|0:39:13       1|0:100:46
+22     36781335        rs6519096       C       T       .       PASS    AA=T;DP=118     GT:GQ:DP        1|1:24:24       0|1:62:12       1|0:100:81
+7      135223854       rs4728372       C       T       .       PASS    AA=T;DP=105     GT:GQ:DP        1|1:24:24       0|1:69:24       1|0:100:44
+5      23194558        rs1435241       G       A       .       PASS    AA=G;DP=130     GT:GQ:DP        1|1:24:33       0|0:75:25       1|0:100:60
+X      125856665       rs5931760       A       G       .       PASS    AA=a;DP=100     GT:GQ:DP        1|1:24:8        1|0:100:22      1|1:100:49
+X      113514020       rs6644076       G       A       .       PASS    AA=a;DP=69      GT:GQ:DP        1|1:24:8        1|0:67:17       1|1:75:25
+X      79581784        .       A       G       .       PASS    AA=a;DP=91      GT:GQ:DP        1|1:24:8        1|0:87:22       1|1:66:22
+X      128615454       rs2281068       T       C       .       PASS    AA=C;DP=94      GT:GQ:DP        1|1:24:8        1|0:98:15       1|1:100:38
+X      23604531        rs544971        G       A       .       PASS    AA=A;DP=95      GT:GQ:DP        1|1:24:9        0|1:100:25      1|0:100:36
+20     24358083        rs6049675       G       A       .       PASS    AA=A;DP=77      GT:GQ:DP        1|1:24:9        0|1:70:15       1|0:100:51
+X      116447360       rs5911823       A       C       .       PASS    AA=C;DP=100     GT:GQ:DP        1|1:24:9        0|1:86:18       1|0:100:44
+X      101155677       rs2858349       T       C       .       PASS    AA=.;DP=80      GT:GQ:DP        1|1:24:9        0|1:93:15       1|0:100:29
+X      70007443        rs61211309      C       G       .       PASS    AA=C;DP=94      GT:GQ:DP        1|1:24:9        0|1:95:26       1|0:100:38
+X      29357698        rs2340372       C       T       .       PASS    AA=T;DP=95      GT:GQ:DP        1|1:24:9        1|0:100:14      1|1:100:35
+X      115810538       rs1542970       A       G       .       PASS    AA=a;DP=80      GT:GQ:DP        1|1:24:9        1|0:100:23      1|1:81:27
+X      8066609 rs11795869      C       T       .       PASS    AA=C;DP=97      GT:GQ:DP        1|1:24:9        1|0:100:26      1|1:100:35
+X      79842464        .       G       A       .       PASS    AA=G;DP=77      GT:GQ:DP        1|1:24:9        1|0:65:14       1|1:75:25
+X      86758031        rs2281311       G       A       .       PASS    AA=A;DP=75      GT:GQ:DP        1|1:24:9        1|0:70:18       1|1:66:22
+X      115399897       rs7879343       C       T       .       PASS    AA=N;DP=84      GT:GQ:DP        1|1:25:10       0|0:19:17       1|0:100:31
+9      11683150        .       G       A       .       PASS    AA=G;DP=71      GT:GQ:DP        1|1:25:10       0|0:33:12       1|0:100:48
+X      113028099       rs12010388      C       T       .       PASS    AA=C;DP=82      GT:GQ:DP        1|1:25:10       0|0:36:15       1|0:100:44
+X      98240166        rs5920718       A       G       .       PASS    AA=A;DP=101     GT:GQ:DP        1|1:25:10       0|0:44:26       1|0:100:42
+4      63675521        rs1387535       G       A       .       PASS    AA=A;DP=72      GT:GQ:DP        1|1:25:10       0|0:45:16       1|0:100:45
+18     26751753        rs11660038      A       G       .       PASS    AA=G;DP=87      GT:GQ:DP        1|1:25:10       0|0:45:16       1|0:100:47
+X      6470743 .       T       C       .       PASS    AA=T;DP=73      GT:GQ:DP        1|1:25:10       0|0:48:16       1|0:100:14
+X      26318817        rs2873029       C       A       .       PASS    AA=A;DP=74      GT:GQ:DP        1|1:25:10       0|0:48:16       1|0:100:26
+X      126948410       rs5976725       A       C       .       PASS    AA=A;DP=75      GT:GQ:DP        1|1:25:10       0|0:54:19       1|0:100:25
+X      44543903        rs5952262       A       T       .       PASS    AA=T;DP=86      GT:GQ:DP        1|1:25:10       0|0:60:20       1|0:100:31
+X      125788557       rs6636085       C       T       .       PASS    AA=C;DP=100     GT:GQ:DP        1|1:25:10       0|0:63:22       1|0:100:32
+X      96328149        rs2209550       T       C       .       PASS    AA=T;DP=83      GT:GQ:DP        1|1:25:10       0|0:66:22       1|0:100:22
+X      22257695        rs12558801      C       A       .       PASS    AA=c;DP=90      GT:GQ:DP        1|1:25:10       0|0:66:22       1|0:100:26
+X      142168304       .       A       G       .       PASS    AA=A;DP=114     GT:GQ:DP        1|1:25:10       0|0:66:22       1|0:100:40
+X      121244287       rs1904932       T       C       .       PASS    AA=C;DP=89      GT:GQ:DP        1|1:25:10       0|0:70:29       1|0:100:29
+X      138040295       rs5929976       A       T       .       PASS    AA=T;DP=97      GT:GQ:DP        1|1:25:10       0|0:75:25       1|0:100:35
+X      121640975       .       A       T       .       PASS    AA=A;DP=76      GT:GQ:DP        1|1:25:10       0|0:75:26       1|0:100:32
+X      154432298       .       G       T       .       PASS    AA=G;DP=95      GT:GQ:DP        1|1:25:10       0|0:75:27       1|0:100:28
+X      33630893        .       G       A       .       PASS    AA=G;DP=82      GT:GQ:DP        1|1:25:10       0|0:75:27       1|0:100:30
+X      128776911       .       A       G       .       PASS    AA=A;DP=104     GT:GQ:DP        1|1:25:10       0|0:78:26       1|0:100:30
+X      114077910       .       G       A       .       PASS    AA=g;DP=86      GT:GQ:DP        1|1:25:10       0|0:78:27       1|0:100:35
+X      34944602        .       C       T       .       PASS    AA=C;DP=108     GT:GQ:DP        1|1:25:10       0|0:81:28       1|0:100:35
+X      100444863       .       G       A       .       PASS    AA=G;DP=95      GT:GQ:DP        1|1:25:10       0|0:87:29       1|0:100:35
+X      81925151        rs10126368      G       C       .       PASS    AA=G;DP=94      GT:GQ:DP        1|1:25:10       0|0:93:32       1|0:92:26
+13     44437879        rs1175391       A       G       .       PASS    AA=a;DP=66      GT:GQ:DP        1|1:25:11       0|0:48:16       1|0:100:26
+X      5163432 .       T       C       .       PASS    AA=t;DP=104     GT:GQ:DP        1|1:25:11       0|0:54:18       1|0:100:30
+X      132434003       rs61401100      G       A       .       PASS    AA=g;DP=90      GT:GQ:DP        1|1:25:11       0|0:63:24       1|0:100:44
+6      69546532        rs9454617       T       C       .       PASS    AA=T;DP=96      GT:GQ:DP        1|1:25:11       0|0:66:22       1|0:100:52
+X      75892403        rs5938662       T       C       .       PASS    AA=T;DP=104     GT:GQ:DP        1|1:25:12       0|0:72:25       1|0:100:31
+X      153419379       rs5986991       A       G       .       PASS    AA=N;DP=103     GT:GQ:DP        1|1:25:12       1|1:31:18       1|1:100:47
+11     59080651        rs7952495       G       A       .       PASS    AA=A;DP=74      GT:GQ:DP        1|1:25:12       1|1:56:18       1|1:100:33
+20     58745722        rs1202022       G       A       .       PASS    AA=A;DP=94      GT:GQ:DP        1|1:25:12       1|1:74:24       1|1:100:57
+X      117410049       rs5956966       C       A       .       PASS    AA=A;DP=108     GT:GQ:DP        1|1:25:12       1|1:80:26       1|1:100:47
+16     50172593        rs8063267       T       G       .       PASS    AA=g;DP=69      GT:GQ:DP        1|1:25:14       1|1:47:14       1|1:100:40
+1      29906726        rs271367        A       G       .       PASS    AA=a;DP=84      GT:GQ:DP        1|1:25:15       1|0:100:17      1|1:97:53
+X      115882908       rs5957036       A       G       .       PASS    AA=A;DP=101     GT:GQ:DP        1|1:25:15       1|0:100:21      1|1:70:35
+5      128798435       .       A       C       .       PASS    AA=C;DP=86      GT:GQ:DP        1|1:25:15       1|0:72:21       1|1:100:48
+6      80198977        rs6454122       T       G       .       PASS    AA=G;DP=80      GT:GQ:DP        1|1:25:16       1|1:58:24       1|1:81:30
+16     4570531 rs4786525       T       C       .       PASS    AA=T;DP=106     GT:GQ:DP        1|1:25:17       0|1:100:26      1|0:100:61
+2      83672047        .       G       A       .       PASS    AA=G;DP=70      GT:GQ:DP        1|1:25:17       1|0:76:14       1|1:100:40
+21     23531250        rs7282152       T       C       .       PASS    AA=C;DP=61      GT:GQ:DP        1|1:25:17       1|1:47:14       1|1:88:21
+4      178944733       rs11131822      A       G       .       PASS    AA=a;DP=105     GT:GQ:DP        1|1:25:20       0|0:45:15       1|0:100:71
+2      73136310        rs6755231       A       G       .       PASS    AA=N;DP=106     GT:GQ:DP        1|1:25:20       1|1:38:23       1|1:100:48
+15     94707126        rs2398224       G       C       .       PASS    AA=C;DP=108     GT:GQ:DP        1|1:25:20       1|1:56:17       1|1:100:70
+8      93089764        rs7011377       G       T       .       PASS    AA=G;DP=102     GT:GQ:DP        1|1:25:21       0|0:38:26       1|0:100:55
+5      33722629        rs13169825      A       C       .       PASS    AA=a;DP=74      GT:GQ:DP        1|1:25:21       0|1:64:16       1|0:100:33
+12     69384204        rs1513106       G       C       .       PASS    AA=C;DP=92      GT:GQ:DP        1|1:25:23       1|0:100:23      1|1:61:46
+X      95352717        rs5990505       G       A       .       PASS    AA=G;DP=93      GT:GQ:DP        1|1:25:25       0|0:45:15       1|0:100:31
+14     84095879        rs1118301       G       A       .       PASS    AA=G;DP=114     GT:GQ:DP        1|1:25:25       0|0:63:22       1|0:100:66
+4      181673245       rs1422740       A       G       .       PASS    AA=G;DP=98      GT:GQ:DP        1|1:25:28       0|1:57:22       1|0:100:38
+X      36352431        rs5973659       T       C       .       PASS    AA=C;DP=82      GT:GQ:DP        1|1:26:12       1|1:20:10       1|1:100:34
+X      120861437       rs1417957       C       T       .       PASS    AA=T;DP=69      GT:GQ:DP        1|1:26:12       1|1:53:18       1|1:77:17
+2      180550159       rs12693217      T       G       .       PASS    AA=G;DP=80      GT:GQ:DP        1|1:26:13       0|1:4:18        1|0:4:35
+X      23373890        rs35995058      C       T       .       PASS    AA=T;DP=93      GT:GQ:DP        1|1:26:13       1|1:71:22       1|1:100:36
+X      92323624        rs2792358       G       A       .       PASS    AA=.;DP=91      GT:GQ:DP        1|1:26:14       1|0:53:17       1|1:100:36
+12     11231407        rs34263586      A       G       .       PASS    AA=A;DP=66      GT:GQ:DP        1|1:26:16       0|0:30:10       1|0:100:28
+5      61411469        rs1345762       C       T       .       PASS    AA=T;DP=115     GT:GQ:DP        1|1:26:19       0|1:100:27      1|0:100:69
+7      100560995       rs2227660       G       A       .       PASS    AA=G;DP=95      GT:GQ:DP        1|1:26:23       1|1:36:17       1|1:100:55
+1      172215285       rs12565352      T       C       .       PASS    AA=C;DP=111     GT:GQ:DP        1|1:26:25       1|1:25:21       1|1:100:65
+1      214491592       rs696724        T       G       .       PASS    AA=T;DP=81      GT:GQ:DP        1|1:26:27       0|0:42:14       1|0:100:30
+7      96693814        rs9641204       T       C       .       PASS    AA=C;DP=117     GT:GQ:DP        1|1:26:29       1|1:40:26       1|1:100:63
+X      126735393       rs226601        T       G       .       PASS    AA=.;DP=80      GT:GQ:DP        1|1:26:7        1|1:38:22       1|1:92:22
+X      33984779        rs3006090       G       A       .       PASS    AA=A;DP=78      GT:GQ:DP        1|1:26:7        1|1:46:29       1|1:98:24
+X      128294426       rs5977039       G       A       .       PASS    AA=A;DP=71      GT:GQ:DP        1|1:26:7        1|1:47:20       1|1:100:26
+X      141596807       rs4142567       G       A       .       PASS    AA=A;DP=89      GT:GQ:DP        1|1:26:7        1|1:56:17       1|1:100:33
+X      27546990        rs9306773       G       C       .       PASS    AA=C;DP=67      GT:GQ:DP        1|1:26:7        1|1:65:20       1|1:100:26
+X      5084304 rs5961300       T       A       .       PASS    AA=.;DP=66      GT:GQ:DP        1|1:26:7        1|1:68:21       1|1:92:22
+4      73643081        rs2623528       G       T       .       PASS    AA=T;DP=86      GT:GQ:DP        1|1:26:7        1|1:68:22       1|1:100:57
+8      9452578 rs6980489       G       A       .       PASS    AA=A;DP=93      GT:GQ:DP        1|1:26:7        1|1:74:23       1|1:100:64
+X      83638076        rs7886859       G       A       .       PASS    AA=A;DP=85      GT:GQ:DP        1|1:26:7        1|1:74:24       1|1:100:30
+8      20068350        rs7842711       T       C       .       PASS    AA=C;DP=75      GT:GQ:DP        1|1:26:9        1|1:47:18       1|1:100:48
+21     22698453        rs2827484       G       A       .       PASS    AA=A;DP=68      GT:GQ:DP        1|1:27:10       0|1:100:15      1|0:100:44
+11     55281950        .       A       C       .       PASS    AA=a;DP=95      GT:GQ:DP        1|1:27:10       0|1:100:34      1|0:100:52
+X      150619923       rs4323608       A       G       .       PASS    AA=G;DP=60      GT:GQ:DP        1|1:27:10       0|1:55:14       1|0:100:24
+6      35031842        rs847845        G       A       .       PASS    AA=g;DP=78      GT:GQ:DP        1|1:27:10       0|1:65:16       1|0:100:52
+2      35087990        rs7585753       A       T       .       PASS    AA=A;DP=65      GT:GQ:DP        1|1:27:10       0|1:77:15       1|0:100:43
+8      108950255       .       C       T       .       PASS    AA=C;DP=97      GT:GQ:DP        1|1:27:10       0|1:89:27       1|0:100:56
+X      141070393       rs2092256       C       T       .       PASS    AA=T;DP=90      GT:GQ:DP        1|1:27:10       0|1:92:29       1|0:100:29
+X      131797314       rs5977766       G       A       .       PASS    AA=G;DP=102     GT:GQ:DP        1|1:27:10       1|0:100:32      1|1:96:32
+8      34412057        rs6988455       T       A       .       PASS    AA=T;DP=91      GT:GQ:DP        1|1:27:11       0|1:100:29      1|0:100:53
+18     5022640 rs2321276       C       T       .       PASS    AA=C;DP=81      GT:GQ:DP        1|1:27:11       0|1:15:14       1|0:100:58
+X      116672682       rs2206234       T       C       .       PASS    AA=N;DP=70      GT:GQ:DP        1|1:27:11       0|1:16:10       1|0:100:34
+X      50639914        rs5915343       G       C       .       PASS    AA=G;DP=90      GT:GQ:DP        1|1:27:11       0|1:43:16       1|0:100:33
+6      146741665       rs7758008       T       G       .       PASS    AA=G;DP=94      GT:GQ:DP        1|1:27:14       0|0:7:17        1|0:100:64
+6      80356918        rs2655674       G       A       .       PASS    AA=A;DP=61      GT:GQ:DP        1|1:27:14       1|1:41:15       1|1:80:23
+X      40401924        .       C       T       .       PASS    AA=C;DP=95      GT:GQ:DP        1|1:27:15       1|0:98:19       1|1:100:36
+X      108841644       rs5943421       G       A       .       PASS    AA=A;DP=115     GT:GQ:DP        1|1:27:15       1|1:68:21       1|1:100:42
+14     24812131        rs57285831      T       G       .       PASS    AA=T;DP=107     GT:GQ:DP        1|1:27:16       0|0:22:22       1|0:100:69
+7      16190477        rs10280718      G       A       .       PASS    AA=A;DP=91      GT:GQ:DP        1|1:27:16       0|0:51:19       1|0:100:51
+5      22290365        rs11952194      C       A       .       PASS    AA=C;DP=84      GT:GQ:DP        1|1:27:16       0|0:57:19       1|0:100:49
+X      117787551       rs6646258       G       A       .       PASS    AA=G;DP=97      GT:GQ:DP        1|1:27:16       0|0:69:24       1|0:100:21
+6      49943294        rs1084051       T       C       .       PASS    AA=C;DP=74      GT:GQ:DP        1|1:27:17       1|1:44:13       1|1:100:44
+16     645845  rs8051645       T       C       .       PASS    AA=C;DP=90      GT:GQ:DP        1|1:27:18       1|1:35:10       1|1:100:62
+2      140259617       rs1520093       C       T       .       PASS    AA=T;DP=88      GT:GQ:DP        1|1:27:18       1|1:41:23       1|1:79:47
+8      10592514        rs12680711      T       C       .       PASS    AA=C;DP=81      GT:GQ:DP        1|1:27:18       1|1:44:13       1|1:100:38
+12     95578979        .       G       T       .       PASS    AA=T;DP=93      GT:GQ:DP        1|1:27:18       1|1:47:14       1|1:77:47
+10     84171393        .       T       A       .       PASS    AA=T;DP=102     GT:GQ:DP        1|1:27:18       1|1:52:27       1|1:100:57
+3      134278733       rs9865814       A       G       .       PASS    AA=G;DP=99      GT:GQ:DP        1|1:27:18       1|1:56:17       1|1:100:63
+3      84974663        rs401242        T       C       .       PASS    AA=t;DP=87      GT:GQ:DP        1|1:27:18       1|1:59:19       1|1:100:50
+8      146267218       rs10107337      T       C       .       PASS    AA=.;DP=100     GT:GQ:DP        1|1:27:18       1|1:59:19       1|1:100:62
+14     78182818        rs8181983       G       T       .       PASS    AA=T;DP=127     GT:GQ:DP        1|1:27:18       1|1:80:27       1|1:100:80
+16     80958556        rs9937851       A       G       .       PASS    AA=G;DP=111     GT:GQ:DP        1|1:27:18       1|1:92:29       1|1:100:65
+11     20367168        rs6483665       C       A       .       PASS    AA=A;DP=97      GT:GQ:DP        1|1:27:19       0|1:75:16       1|0:100:65
+2      142951234       .       G       A       .       PASS    AA=G;DP=94      GT:GQ:DP        1|1:27:20       0|0:45:15       1|0:100:57
+5      9473374 rs666617        T       C       .       PASS    AA=T;DP=104     GT:GQ:DP        1|1:27:20       1|0:100:20      1|1:100:67
+19     51790267        rs7260181       C       T       .       PASS    AA=T;DP=122     GT:GQ:DP        1|1:27:20       1|0:100:37      1|1:100:66
+8      24781806        rs6557778       T       C       .       PASS    AA=C;DP=85      GT:GQ:DP        1|1:27:20       1|0:17:16       1|1:100:46
+15     54413962        rs2725862       T       C       .       PASS    AA=T;DP=100     GT:GQ:DP        1|1:27:20       1|0:70:23       1|1:90:30
+2      20499891        rs12621260      C       T       .       PASS    AA=C;DP=126     GT:GQ:DP        1|1:27:20       1|0:83:22       1|1:100:87
+5      119622682       rs1422395       G       A       .       PASS    AA=G;DP=90      GT:GQ:DP        1|1:27:20       1|0:92:14       1|1:100:52
+6      31427870        rs2442726       G       T       .       PASS    AA=t;DP=91      GT:GQ:DP        1|1:27:20       1|1:10:9        1|1:74:63
+16     84895343        rs2665318       C       T       .       PASS    AA=C;DP=91      GT:GQ:DP        1|1:27:20       1|1:16:11       1|1:100:49
+1      112024326       rs578650        A       G       .       PASS    AA=G;DP=107     GT:GQ:DP        1|1:27:21       0|1:20:18       1|0:100:68
+22     23419759        rs5760585       C       G       .       PASS    AA=.;DP=105     GT:GQ:DP        1|1:27:21       0|1:27:26       1|0:100:57
+8      73202613        rs13277178      A       G       .       PASS    AA=A;DP=108     GT:GQ:DP        1|1:27:21       0|1:57:22       1|0:100:68
+7      57323006        rs4373471       T       A       .       PASS    AA=a;DP=115     GT:GQ:DP        1|1:27:25       0|1:100:29      1|0:100:62
+1      106925848       rs12040864      T       C       .       PASS    AA=C;DP=94;HM2  GT:GQ:DP        1|1:27:25       1|0:100:16      1|1:100:53
+6      120946738       rs1767489       T       C       .       PASS    AA=T;DP=116     GT:GQ:DP        1|1:27:26       0|0:69:25       1|0:100:65
+5      153212956       rs6869879       G       A       .       PASS    AA=A;DP=94      GT:GQ:DP        1|1:27:26       1|1:45:18       1|1:100:50
+2      155440038       rs10199000      G       T       .       PASS    AA=G;DP=95      GT:GQ:DP        1|1:27:27       1|0:50:24       1|1:66:34
+5      84072934        rs6452579       G       A       .       PASS    AA=G;DP=66      GT:GQ:DP        1|1:27:9        1|0:100:15      1|1:82:42
+X      120581434       rs7881328       G       A       .       PASS    AA=A;DP=71      GT:GQ:DP        1|1:27:9        1|0:100:18      1|1:69:23
+X      143399816       rs7474382       A       C       .       PASS    AA=A;DP=74      GT:GQ:DP        1|1:27:9        1|0:100:21      1|1:78:27
+X      51265523        rs4907792       C       T       .       PASS    AA=c;DP=114     GT:GQ:DP        1|1:27:9        1|0:100:23      1|1:100:41
+X      21704711        rs7892601       T       C       .       PASS    AA=t;DP=71      GT:GQ:DP        1|1:27:9        1|0:100:26      1|1:84:29
+X      147297528       rs5936354       G       A       .       PASS    AA=G;DP=72      GT:GQ:DP        1|1:27:9        1|0:69:14       1|1:100:34
+X      113360916       rs12397230      G       A       .       PASS    AA=a;DP=92      GT:GQ:DP        1|1:27:9        1|0:92:21       1|1:100:34
+X      124073159       rs5956734       A       T       .       PASS    AA=T;DP=66      GT:GQ:DP        1|1:27:9        1|0:93:12       1|1:72:25
+X      121415171       rs4625153       A       C       .       PASS    AA=C;DP=78      GT:GQ:DP        1|1:28:11       0|0:10:17       1|0:97:26
+4      35195837        rs7685838       G       T       .       PASS    AA=G;DP=51      GT:GQ:DP        1|1:28:11       0|0:19:21       1|0:100:17
+X      88430077        rs57521551      C       T       .       PASS    AA=C;DP=76      GT:GQ:DP        1|1:28:11       0|0:30:11       1|0:100:39
+X      96766552        rs16982469      A       C       .       PASS    AA=A;DP=98      GT:GQ:DP        1|1:28:11       0|0:35:22       1|0:100:29
+X      141440152       .       G       A       .       PASS    AA=A;DP=76      GT:GQ:DP        1|1:28:11       0|0:38:17       1|0:100:31
+X      20916285        .       A       G       .       PASS    AA=a;DP=95      GT:GQ:DP        1|1:28:11       0|0:38:18       1|0:100:34
+X      104500434       rs4826920       G       A       .       PASS    AA=G;DP=72      GT:GQ:DP        1|1:28:11       0|0:39:13       1|0:100:16
+X      11272370        .       G       A       .       PASS    AA=N;DP=79      GT:GQ:DP        1|1:28:11       0|0:42:14       1|0:100:37
+3      31071900        rs6767866       T       C       .       PASS    AA=T;DP=77      GT:GQ:DP        1|1:28:11       0|0:42:15       1|0:100:50
+X      94282704        rs4358984       C       A       .       PASS    AA=.;DP=79      GT:GQ:DP        1|1:28:11       0|0:51:17       1|0:100:27
+X      10258354        .       C       T       .       PASS    AA=c;DP=82      GT:GQ:DP        1|1:28:11       0|0:51:18       1|0:100:45
+7      94584466        rs10260812      G       A       .       PASS    AA=A;DP=100     GT:GQ:DP        1|1:28:11       0|0:51:18       1|0:100:71
+X      113875165       rs2497537       A       G       .       PASS    AA=A;DP=53      GT:GQ:DP        1|1:28:11       0|0:54:18       1|0:100:11
+X      9436990 rs2521373       A       G       .       PASS    AA=a;DP=83      GT:GQ:DP        1|1:28:11       0|0:54:18       1|0:100:32
+13     84803927        rs11149368      T       C       .       PASS    AA=T;DP=84      GT:GQ:DP        1|1:28:11       0|0:57:19       1|0:100:53
+X      36115973        rs12009641      G       A       .       PASS    AA=G;DP=99      GT:GQ:DP        1|1:28:11       0|0:57:20       1|0:100:33
+X      113244752       .       A       C       .       PASS    AA=A;DP=62      GT:GQ:DP        1|1:28:11       0|0:63:21       1|0:100:19
+X      69846582        rs5936959       A       G       .       PASS    AA=-;DP=96      GT:GQ:DP        1|1:28:11       0|0:66:22       1|0:100:24
+X      142103816       .       T       C       .       PASS    AA=t;DP=104     GT:GQ:DP        1|1:28:11       0|0:66:25       1|0:100:35
+X      146533791       .       T       C       .       PASS    AA=t;DP=118     GT:GQ:DP        1|1:28:11       0|0:72:25       1|0:100:44
+X      82221662        .       G       T       .       PASS    AA=G;DP=102     GT:GQ:DP        1|1:28:11       0|0:72:39       1|0:100:28
+X      104997685       .       T       C       .       PASS    AA=T;DP=101     GT:GQ:DP        1|1:28:11       0|0:78:26       1|0:100:31
+X      82874652        rs5968215       A       C       .       PASS    AA=A;DP=103     GT:GQ:DP        1|1:28:11       0|0:81:27       1|0:100:37
+X      125671058       rs6635843       C       T       .       PASS    AA=C;DP=107     GT:GQ:DP        1|1:28:11       0|0:84:28       1|0:100:33
+X      23207980        rs7889841       C       G       .       PASS    AA=N;DP=108     GT:GQ:DP        1|1:28:11       0|0:96:34       1|0:100:42
+X      143691202       rs6525826       C       G       .       PASS    AA=C;DP=120     GT:GQ:DP        1|1:28:11       0|0:99:34       1|0:100:35
+X      111196826       rs7052016       G       A       .       PASS    AA=G;DP=122     GT:GQ:DP        1|1:28:12       0|0:75:29       1|0:100:42
+3      1341653 rs1499118       G       C       .       PASS    AA=g;DP=106     GT:GQ:DP        1|1:28:13       0|0:99:33       1|0:100:58
+9      31785236        .       T       G       .       PASS    AA=T;DP=70      GT:GQ:DP        1|1:28:13       1|0:69:18       1|1:78:26
+12     84332798        rs7311781       C       T       .       PASS    AA=T;DP=82      GT:GQ:DP        1|1:28:14       1|1:56:17       1|1:100:51
+4      139028717       rs6855502       T       C       .       PASS    AA=T;DP=73      GT:GQ:DP        1|1:28:15       0|1:62:17       1|0:100:41
+4      190093345       rs3860667       G       C       .       PASS    AA=C;DP=93      GT:GQ:DP        1|1:28:16       0|1:36:17       1|0:100:61
+8      132753997       rs7831306       G       T       .       PASS    AA=T;DP=57      GT:GQ:DP        1|1:28:16       1|1:41:13       1|1:97:24
+X      93825168        rs1591798       A       C       .       PASS    AA=.;DP=87      GT:GQ:DP        1|1:28:16       1|1:52:21       1|1:62:28
+1      65918894        rs56036732      C       T       .       PASS    AA=C;DP=90      GT:GQ:DP        1|1:28:17       0|0:41:17       1|0:100:54
+22     15666147        rs2385715       T       A       .       PASS    AA=T;DP=89      GT:GQ:DP        1|1:28:17       0|0:63:21       1|0:100:53
+X      152651033       rs4148033       G       A       .       PASS    AA=G;DP=124     GT:GQ:DP        1|1:28:17       1|0:55:15       1|1:100:55
+3      197591524       rs13075614      T       C       .       PASS    AA=T;DP=88      GT:GQ:DP        1|1:28:18       0|0:61:27       1|0:100:31
+9      1898069 rs7030792       A       G       .       PASS    AA=G;DP=79      GT:GQ:DP        1|1:28:19       0|1:100:21      1|0:100:32
+1      39157673        rs7522863       A       C       .       PASS    AA=C;DP=116;HM2;HM3     GT:GQ:DP        1|1:28:20       0|0:60:20       1|0:100:79
+X      17695330        rs16992269      T       G       .       PASS    AA=N;DP=136     GT:GQ:DP        1|1:28:20       1|0:81:19       1|1:100:63
+16     52036585        rs1362429       G       C       .       PASS    AA=C;DP=88      GT:GQ:DP        1|1:28:20       1|1:36:16       1|1:100:41
+10     128502386       rs12415496      C       T       .       PASS    AA=T;DP=129     GT:GQ:DP        1|1:28:21       0|0:69:28       1|0:100:82
+X      103303574       rs5962514       T       A       .       PASS    AA=A;DP=87      GT:GQ:DP        1|1:28:21       1|1:25:15       1|1:68:26
+18     8827440 rs8091169       A       G       .       PASS    AA=A;DP=130     GT:GQ:DP        1|1:28:22       0|0:90:30       1|0:100:78
+16     9992589 rs12102487      T       C       .       PASS    AA=T;DP=127     GT:GQ:DP        1|1:28:22       0|0:93:32       1|0:100:73
+1      234454360       rs1621565       G       A       .       PASS    AA=G;DP=75      GT:GQ:DP        1|1:28:24       1|1:49:20       1|1:64:23
+7      67289312        rs7780202       C       T       .       PASS    AA=t;DP=112     GT:GQ:DP        1|1:28:26       0|0:66:25       1|0:100:60
+6      138874719       rs4243452       T       C       .       PASS    AA=C;DP=100     GT:GQ:DP        1|1:28:26       0|1:57:14       1|0:100:59
+1      175379979       rs7531103       T       G       .       PASS    AA=G;DP=78;HM2;HM3      GT:GQ:DP        1|1:28:8        1|1:12:14       1|1:100:56
+X      86206996        rs3859949       T       C       .       PASS    AA=T;DP=75      GT:GQ:DP        1|1:29:12       1|1:37:23       1|1:100:31
+X      15603778        rs5934263       C       T       .       PASS    AA=C;DP=83      GT:GQ:DP        1|1:29:14       1|0:42:8        1|1:100:42
+14     47373084        rs12886409      T       G       .       PASS    AA=t;DP=57      GT:GQ:DP        1|1:29:14       1|1:31:17       1|1:64:19
+9      32055300        rs414483        G       A       .       PASS    AA=A;DP=72      GT:GQ:DP        1|1:29:15       1|0:74:17       1|1:100:36
+X      38181534        rs6609776       G       T       .       PASS    AA=G;DP=134     GT:GQ:DP        1|1:29:16       0|0:75:25       1|0:100:51
+12     32712816        rs4931036       A       G       .       PASS    AA=A;DP=107     GT:GQ:DP        1|1:29:16       0|1:100:27      1|0:100:66
+6      22464732        .       C       A       .       PASS    AA=C;DP=61      GT:GQ:DP        1|1:29:16       1|0:8:5 1|1:54:30
+X      13228210        rs60490715      T       G       .       PASS    AA=T;DP=103     GT:GQ:DP        1|1:29:17       0|0:72:24       1|0:100:33
+X      3144732 rs5982679       T       G       .       PASS    AA=G;DP=104     GT:GQ:DP        1|1:29:17       1|1:74:23       1|1:100:36
+6      32609227        rs2894267       T       C       .       PASS    AA=-;DP=65      GT:GQ:DP        1|1:29:18       0|0:4:14        1|0:100:24
+4      126563728       rs1912042       A       C       .       PASS    AA=A;DP=80      GT:GQ:DP        1|1:29:19       1|1:18:19       1|1:80:31
+14     25066915        rs4265731       T       C       .       PASS    AA=C;DP=96      GT:GQ:DP        1|1:29:19       1|1:19:19       1|1:100:72
+7      1217886 rs4442038       A       G       .       PASS    AA=G;DP=80      GT:GQ:DP        1|1:29:19       1|1:35:10       1|1:100:50
+7      97119327        rs7791585       C       T       .       PASS    AA=T;DP=99      GT:GQ:DP        1|1:29:19       1|1:38:22       1|1:100:36
+6      34088145        rs2496000       A       T       .       PASS    AA=T;DP=89      GT:GQ:DP        1|1:29:19       1|1:50:15       1|1:100:58
+7      88755088        rs719372        C       G       .       PASS    AA=G;DP=92      GT:GQ:DP        1|1:29:19       1|1:52:24       1|1:100:49
+5      84204620        rs6414936       C       G       .       PASS    AA=G;DP=83      GT:GQ:DP        1|1:29:19       1|1:56:20       1|1:100:35
+6      40223281        rs4714305       C       T       .       PASS    AA=T;DP=83      GT:GQ:DP        1|1:29:19       1|1:62:20       1|1:100:44
+9      91852832        rs661690        T       C       .       PASS    AA=C;DP=77      GT:GQ:DP        1|1:29:19       1|1:68:21       1|1:71:25
+16     72581487        rs2663150       C       T       .       PASS    AA=T;DP=102     GT:GQ:DP        1|1:29:19       1|1:68:24       1|1:100:56
+18     23611988        rs3110550       A       G       .       PASS    AA=G;DP=115     GT:GQ:DP        1|1:29:19       1|1:71:24       1|1:100:73
+3      70278220        rs6549279       A       C       .       PASS    AA=C;DP=85      GT:GQ:DP        1|1:29:20       1|0:100:18      1|1:100:46
+9      118582815       rs6478250       T       G       .       PASS    AA=G;DP=129     GT:GQ:DP        1|1:29:20       1|1:35:21       1|1:100:83
+4      43536696        rs1903339       G       A       .       PASS    AA=G;DP=94      GT:GQ:DP        1|1:29:21       0|1:100:22      1|0:100:50
+14     56747023        rs10134515      G       A       .       PASS    AA=A;DP=64      GT:GQ:DP        1|1:29:21       0|1:90:17       1|0:46:18
+2      42390942        rs7604624       C       A       .       PASS    AA=c;DP=93      GT:GQ:DP        1|1:29:22       0|0:34:17       1|0:100:55
+X      90193183        rs4893259       T       C       .       PASS    AA=C;DP=100     GT:GQ:DP        1|1:29:8        1|1:27:18       1|1:100:27
+X      28437898        rs5985782       A       G       .       PASS    AA=A;DP=78      GT:GQ:DP        1|1:29:8        1|1:29:23       1|1:67:25
+11     45294016        rs6485613       C       T       .       PASS    AA=T;DP=59      GT:GQ:DP        1|1:29:8        1|1:38:12       1|1:100:28
+X      146686294       rs5904775       G       A       .       PASS    AA=A;DP=80      GT:GQ:DP        1|1:29:8        1|1:41:13       1|1:100:39
+16     78288700        rs6564691       C       T       .       PASS    AA=T;DP=62      GT:GQ:DP        1|1:29:8        1|1:47:14       1|1:100:39
+X      134429089       rs5930722       G       T       .       PASS    AA=T;DP=77      GT:GQ:DP        1|1:29:8        1|1:50:15       1|1:72:30
+X      141014708       rs4824890       G       C       .       PASS    AA=C;DP=90      GT:GQ:DP        1|1:29:8        1|1:59:20       1|1:100:30
+X      15118499        rs5980127       T       C       .       PASS    AA=T;DP=84      GT:GQ:DP        1|1:29:8        1|1:59:21       1|1:100:26
+X      65550013        rs6525069       C       T       .       PASS    AA=T;DP=86      GT:GQ:DP        1|1:29:8        1|1:62:19       1|1:100:26
+X      84022915        rs4515693       G       A       .       PASS    AA=.;DP=78      GT:GQ:DP        1|1:29:8        1|1:62:19       1|1:74:15
+X      145419332       rs5966238       C       T       .       PASS    AA=C;DP=78      GT:GQ:DP        1|1:29:8        1|1:65:20       1|1:100:24
+X      37777940        rs17144700      C       T       .       PASS    AA=C;DP=119     GT:GQ:DP        1|1:29:8        1|1:77:26       1|1:100:34
+X      92471150        rs6522636       T       C       .       PASS    AA=C;DP=101     GT:GQ:DP        1|1:29:8        1|1:92:29       1|1:100:42
+X      80085472        rs12840754      G       A       .       PASS    AA=g;DP=105     GT:GQ:DP        1|1:29:9        1|1:79:35       1|1:92:21
+9      120139822       rs7850243       C       T       .       PASS    AA=T;DP=67      GT:GQ:DP        1|1:30:10       1|0:100:17      1|1:46:40
+X      25115673        rs5986747       G       A       .       PASS    AA=G;DP=104     GT:GQ:DP        1|1:30:10       1|0:100:26      1|1:74:36
+13     55186496        rs9527440       A       G       .       PASS    AA=A;DP=62      GT:GQ:DP        1|1:30:10       1|0:99:14       1|1:84:28
+7      10851237        rs12699156      G       A       .       PASS    AA=A;DP=114     GT:GQ:DP        1|1:30:11       0|1:100:19      1|0:100:62
+X      5383515 rs11094739      A       G       .       PASS    AA=.;DP=89      GT:GQ:DP        1|1:30:11       0|1:100:29      1|0:100:28
+X      39830569        rs12687359      A       T       .       PASS    AA=T;DP=124     GT:GQ:DP        1|1:30:11       0|1:100:32      1|0:100:35
+X      57688239        rs11091673      T       G       .       PASS    AA=.;DP=90      GT:GQ:DP        1|1:30:11       0|1:14:26       1|0:100:30
+X      99426747        rs62601478      A       G       .       PASS    AA=A;DP=97      GT:GQ:DP        1|1:30:11       0|1:49:20       1|0:100:45
+X      78432839        .       C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        1|1:30:11       0|1:53:24       1|0:100:47
+X      85943374        rs60386555      A       T       .       PASS    AA=a;DP=91      GT:GQ:DP        1|1:30:11       0|1:99:26       1|0:100:21
+4      44635247        rs1845953       C       A       .       PASS    AA=A;DP=59      GT:GQ:DP        1|1:30:11       1|0:100:16      1|1:84:28
+3      176384088       rs7648439       T       C       .       PASS    AA=N;DP=90      GT:GQ:DP        1|1:30:11       1|0:100:27      1|1:100:51
+X      94224647        rs56106004      A       G       .       PASS    AA=.;DP=106     GT:GQ:DP        1|1:30:11       1|0:100:27      1|1:69:24
+X      111394116       rs2245082       T       A       .       PASS    AA=T;DP=117     GT:GQ:DP        1|1:30:11       1|0:100:30      1|1:100:42
+X      93686218        rs5949990       C       T       .       PASS    AA=.;DP=93      GT:GQ:DP        1|1:30:12       0|1:21:18       1|0:100:30
+X      125504845       rs5975999       A       G       .       PASS    AA=A;DP=86      GT:GQ:DP        1|1:30:12       0|1:65:19       1|0:100:28
+X      2817487 .       G       T       .       PASS    AA=G;DP=114     GT:GQ:DP        1|1:30:12       0|1:75:21       1|0:100:45
+X      141956088       rs5908518       C       T       .       PASS    AA=C;DP=98      GT:GQ:DP        1|1:30:12       1|0:100:18      1|1:100:43
+X      128124589       rs6637544       T       C       .       PASS    AA=C;DP=120     GT:GQ:DP        1|1:30:13       0|1:100:27      1|0:100:55
+3      167125097       rs6771903       G       A       .       PASS    AA=g;DP=80      GT:GQ:DP        1|1:30:13       1|1:38:11       1|1:100:56
+13     104487250       rs9555125       G       A       .       PASS    AA=G;DP=82      GT:GQ:DP        1|1:30:13       1|1:56:18       1|1:100:51
+X      5013306 rs1448495       T       G       .       PASS    AA=.;DP=105     GT:GQ:DP        1|1:30:14       1|1:80:25       1|1:100:39
+20     50101250        rs6013364       G       A       .       PASS    AA=A;DP=80      GT:GQ:DP        1|1:30:17       1|1:43:13       1|1:100:49
+9      13198136        rs1412108       C       T       .       PASS    AA=T;DP=64      GT:GQ:DP        1|1:30:17       1|1:47:14       1|1:100:24
+14     78331441        rs2370873       G       C       .       PASS    AA=C;DP=92      GT:GQ:DP        1|1:30:17       1|1:59:20       1|1:100:57
+1      107077632       rs1401831       G       A       .       PASS    AA=A;DP=91;HM2  GT:GQ:DP        1|1:30:17       1|1:71:22       1|1:100:50
+6      83294348        rs2917479       G       T       .       PASS    AA=T;DP=68      GT:GQ:DP        1|1:30:18       1|0:16:13       1|1:55:24
+2      158960060       rs2042081       A       G       .       PASS    AA=G;DP=96      GT:GQ:DP        1|1:30:19       0|1:100:16      1|0:100:63
+16     20392680        rs9806821       T       A       .       PASS    AA=T;DP=97      GT:GQ:DP        1|1:30:19       1|0:92:20       1|1:100:59
+10     87114088        .       G       A       .       PASS    AA=G;DP=109     GT:GQ:DP        1|1:30:20       0|0:57:20       1|0:100:70
+17     61559222        rs229854        A       T       .       PASS    AA=A;DP=111     GT:GQ:DP        1|1:30:20       0|0:69:23       1|0:100:68
+14     33573402        rs1680730       G       T       .       PASS    AA=-;DP=101     GT:GQ:DP        1|1:30:21       1|0:100:20      1|1:100:56
+4      30890828        rs4353859       A       G       .       PASS    AA=G;DP=88      GT:GQ:DP        1|1:30:21       1|0:100:24      1|1:88:43
+3      109183642       rs709488        A       C       .       PASS    AA=N;DP=119     GT:GQ:DP        1|1:30:21       1|0:100:31      1|1:100:66
+9      93428774        rs2101671       C       T       .       PASS    AA=C;DP=84      GT:GQ:DP        1|1:30:21       1|0:77:16       1|1:46:47
+2      123992645       rs11891028      A       C       .       PASS    AA=A;DP=99      GT:GQ:DP        1|1:30:22       0|1:64:26       1|0:100:51
+3      60078313        rs34737256      T       C       .       PASS    AA=C;DP=76      GT:GQ:DP        1|1:30:22       0|1:68:14       1|0:100:39
+11     56904169        rs567118        T       G       .       PASS    AA=G;DP=100     GT:GQ:DP        1|1:30:23       1|1:17:14       1|1:100:63
+16     78966783        rs4889141       A       C       .       PASS    AA=C;DP=103     GT:GQ:DP        1|1:30:23       1|1:29:26       1|1:63:54
+20     1256706 rs4814135       T       G       .       PASS    AA=G;DP=138     GT:GQ:DP        1|1:30:23       1|1:39:28       1|1:100:87
+12     113728868       rs7134298       A       G       .       PASS    AA=N;DP=112     GT:GQ:DP        1|1:30:24       0|1:75:18       1|0:100:71
+1      192686590       rs7534147       A       G       .       PASS    AA=A;DP=121     GT:GQ:DP        1|1:30:26       0|1:95:27       1|0:100:68
+14     83977834        rs12895688      A       T       .       PASS    AA=T;DP=74      GT:GQ:DP        1|1:31:12       0|0:18:7        1|0:100:55
+7      38093114        rs1524065       C       A       .       PASS    AA=A;DP=83      GT:GQ:DP        1|1:31:12       0|0:19:18       1|0:100:52
+10     75931838        .       G       A       .       PASS    AA=g;DP=80      GT:GQ:DP        1|1:31:12       0|0:27:9        1|0:100:58
+6      165409249       rs59750227      T       C       .       PASS    AA=T;DP=88      GT:GQ:DP        1|1:31:12       0|0:37:18       1|0:100:61
+X      87043057        rs57206587      C       A       .       PASS    AA=.;DP=97      GT:GQ:DP        1|1:31:12       0|0:41:25       1|0:100:44
+X      29429334        .       G       T       .       PASS    AA=G;DP=93      GT:GQ:DP        1|1:31:12       0|0:48:16       1|0:100:31
+X      144484570       rs1781173       G       A       .       PASS    AA=G;DP=83      GT:GQ:DP        1|1:31:12       0|0:48:16       1|0:100:33
+X      10328903        rs5979308       G       A       .       PASS    AA=G;DP=66      GT:GQ:DP        1|1:31:12       0|0:48:17       1|0:100:17
+X      19207656        rs7062417       T       A       .       PASS    AA=A;DP=86      GT:GQ:DP        1|1:31:12       0|0:48:17       1|0:100:33
+7      125063066       rs10224191      A       G       .       PASS    AA=a;DP=89      GT:GQ:DP        1|1:31:12       0|0:51:17       1|0:100:63
+X      9970420 rs7061118       A       G       .       PASS    AA=A;DP=121     GT:GQ:DP        1|1:31:12       0|0:53:29       1|0:100:42
+6      68545602        rs13204094      G       T       .       PASS    AA=T;DP=86      GT:GQ:DP        1|1:31:12       0|0:60:20       1|0:100:54
+X      138405317       rs5930010       A       G       .       PASS    AA=a;DP=102     GT:GQ:DP        1|1:31:12       0|0:60:21       1|0:100:38
+X      86353011        rs58874471      C       T       .       PASS    AA=C;DP=99      GT:GQ:DP        1|1:31:12       0|0:63:22       1|0:100:30
+X      13470467        .       C       T       .       PASS    AA=C;DP=103     GT:GQ:DP        1|1:31:12       0|0:69:24       1|0:100:48
+14     41803588        rs11847618      C       T       .       PASS    AA=C;DP=99      GT:GQ:DP        1|1:31:12       0|0:75:26       1|0:100:60
+X      93300684        .       G       A       .       PASS    AA=G;DP=90      GT:GQ:DP        1|1:31:12       0|0:78:26       1|0:100:23
+7      115834426       rs10247800      G       A       .       PASS    AA=A;DP=92      GT:GQ:DP        1|1:31:12       0|0:78:26       1|0:100:50
+X      120065835       .       G       A       .       PASS    AA=g;DP=127     GT:GQ:DP        1|1:31:12       0|0:84:28       1|0:100:50
+X      40898077        .       C       A       .       PASS    AA=C;DP=103     GT:GQ:DP        1|1:31:12       0|0:87:29       1|0:100:24
+4      134797963       rs1507373       T       A       .       PASS    AA=A;DP=82      GT:GQ:DP        1|1:31:13       0|0:42:14       1|0:100:57
+X      142030700       rs7878352       G       A       .       PASS    AA=N;DP=91      GT:GQ:DP        1|1:31:13       0|0:51:18       1|0:100:29
+X      37458511        .       T       C       .       PASS    AA=T;DP=75      GT:GQ:DP        1|1:31:13       0|0:60:21       1|0:100:25
+X      71451744        .       T       C       .       PASS    AA=C;DP=107     GT:GQ:DP        1|1:31:14       0|0:69:23       1|0:100:38
+2      33483264        rs860137        A       G       .       PASS    AA=-;DP=73      GT:GQ:DP        1|1:31:14       0|1:52:19       1|0:100:40
+X      57270514        rs506365        C       T       .       PASS    AA=C;DP=103     GT:GQ:DP        1|1:31:15       0|1:96:24       1|0:100:33
+3      35651536        rs62260884      A       G       .       PASS    AA=A;DP=91      GT:GQ:DP        1|1:31:15       1|0:62:23       1|1:44:53
+X      130050135       rs3859990       T       A       .       PASS    AA=T;DP=125     GT:GQ:DP        1|1:31:15       1|1:41:27       1|1:100:42
+20     48901078        rs55868254      C       G       .       PASS    AA=G;DP=54      GT:GQ:DP        1|1:31:16       1|1:9:5 1|1:48:31
+21     34763610        rs11911509      C       A       .       PASS    AA=A;DP=132     GT:GQ:DP        1|1:31:17       1|1:23:25       1|1:100:47
+4      127977535       rs6534586       A       G       .       PASS    AA=a;DP=114     GT:GQ:DP        1|1:31:18       0|0:72:24       1|0:100:73
+13     90902436        .       G       T       .       PASS    AA=G;DP=112     GT:GQ:DP        1|1:31:21       0|0:38:24       1|0:100:66
+10     70581637        rs12268927      A       G       .       PASS    AA=T;DP=87      GT:GQ:DP        1|1:31:23       0|0:30:11       1|0:100:54
+20     15212901        rs6079727       T       C       .       PASS    AA=C;DP=96      GT:GQ:DP        1|1:31:23       0|0:54:19       1|0:100:55
+12     51065658        rs1732305       A       G       .       PASS    AA=G;DP=135     GT:GQ:DP        1|1:31:23       0|0:66:23       1|0:100:87
+5      17860581        rs1849462       A       G       .       PASS    AA=G;DP=104     GT:GQ:DP        1|1:31:23       0|0:84:28       1|0:100:54
+2      824385  rs7593703       A       G       .       PASS    AA=A;DP=125     GT:GQ:DP        1|1:31:23       1|0:100:26      1|1:93:62
+10     123223225       rs1617015       C       A       .       PASS    AA=A;DP=99      GT:GQ:DP        1|1:31:23       1|1:35:24       1|1:90:48
+12     12951048        rs850934        C       T       .       PASS    AA=C;DP=105     GT:GQ:DP        1|1:31:25       0|0:63:22       1|0:100:60
+5      168607279       rs11953419      T       G       .       PASS    AA=G;DP=105     GT:GQ:DP        1|1:31:27       0|0:72:25       1|0:100:56
+5      68572788        rs28768211      A       G       .       PASS    AA=G;DP=123     GT:GQ:DP        1|1:31:27       1|1:27:22       1|1:100:74
+2      189599745       rs7423808       T       G       .       PASS    AA=T;DP=106     GT:GQ:DP        1|1:31:31       0|1:100:26      1|0:100:50
+18     72746648        rs2658749       T       A       .       PASS    AA=A;DP=91      GT:GQ:DP        1|1:31:9        1|1:13:14       1|1:100:62
+X      67303264        rs5965505       T       C       .       PASS    AA=C;DP=101     GT:GQ:DP        1|1:32:10       1|1:53:17       1|1:100:32
+X      9038431 rs1466983       T       C       .       PASS    AA=C;DP=110     GT:GQ:DP        1|1:32:10       1|1:59:18       1|1:100:35
+X      32759465        rs4829269       A       G       .       PASS    AA=G;DP=83      GT:GQ:DP        1|1:32:10       1|1:62:22       1|1:100:30
+X      24566696        rs1921917       A       G       .       PASS    AA=G;DP=97      GT:GQ:DP        1|1:32:10       1|1:68:21       1|1:100:32
+13     71479751        rs9542805       A       G       .       PASS    AA=G;DP=75      GT:GQ:DP        1|1:32:12       0|0:5:14        1|0:100:49
+2      22057175        rs329760        C       A       .       PASS    AA=A;DP=79      GT:GQ:DP        1|1:32:14       1|0:98:17       1|1:100:49
+1      185719049       rs4468121       A       G       .       PASS    AA=G;DP=68      GT:GQ:DP        1|1:32:15       1|1:29:10       1|1:100:46
+6      124229621       rs4512241       T       G       .       PASS    AA=G;DP=98      GT:GQ:DP        1|1:32:15       1|1:67:21       1|1:100:63
+8      104680869       rs2469969       A       G       .       PASS    AA=G;DP=79      GT:GQ:DP        1|1:32:16       1|0:74:18       1|1:97:46
+8      111221304       rs720655        G       T       .       PASS    AA=T;DP=88      GT:GQ:DP        1|1:32:16       1|0:85:15       1|1:100:57
+3      21961382        rs1486363       T       G       .       PASS    AA=G;DP=69      GT:GQ:DP        1|1:32:16       1|1:25:11       1|1:100:42
+4      176989057       rs4690638       G       T       .       PASS    AA=T;DP=74      GT:GQ:DP        1|1:32:16       1|1:47:16       1|1:88:33
+13     22325818        rs2335354       T       C       .       PASS    AA=t;DP=81      GT:GQ:DP        1|1:32:17       0|0:69:23       1|0:100:42
+5      171876123       rs35732638      C       T       .       PASS    AA=C;DP=98      GT:GQ:DP        1|1:32:18       0|0:42:16       1|0:100:66
+3      96642734        rs13091970      T       C       .       PASS    AA=C;DP=78      GT:GQ:DP        1|1:32:18       1|0:92:13       1|1:86:46
+13     84818578        rs4911009       A       G       .       PASS    AA=A;DP=82      GT:GQ:DP        1|1:32:18       1|1:44:13       1|1:100:53
+5      78961780        rs6862519       G       C       .       PASS    AA=C;DP=82      GT:GQ:DP        1|1:32:18       1|1:44:15       1|1:100:50
+4      13506439        rs1606084       C       T       .       PASS    AA=C;DP=104     GT:GQ:DP        1|1:32:20       0|1:100:21      1|0:100:64
+4      96527198        rs12505551      A       T       .       PASS    AA=A;DP=97      GT:GQ:DP        1|1:32:20       1|0:100:17      1|1:100:59
+1      237320229       rs1509691       T       G       .       PASS    AA=G;DP=77;HM2;HM3      GT:GQ:DP        1|1:32:20       1|1:21:16       1|1:100:44
+13     63241820        rs4438178       T       C       .       PASS    AA=C;DP=96      GT:GQ:DP        1|1:32:20       1|1:38:12       1|1:100:64
+8      70610783        rs4737986       A       G       .       PASS    AA=a;DP=97      GT:GQ:DP        1|1:32:20       1|1:53:16       1|1:100:63
+6      152936879       rs9479346       A       C       .       PASS    AA=C;DP=100     GT:GQ:DP        1|1:32:20       1|1:54:27       1|1:100:55
+16     60186130        rs11075423      T       G       .       PASS    AA=G;DP=124     GT:GQ:DP        1|1:32:20       1|1:62:22       1|1:100:71
+11     22162593        rs6483830       A       C       .       PASS    AA=C;DP=80      GT:GQ:DP        1|1:32:20       1|1:71:22       1|1:96:35
+14     29472513        rs6571329       T       G       .       PASS    AA=G;DP=107     GT:GQ:DP        1|1:32:20       1|1:73:30       1|1:100:58
+1      243509352       rs2089720       T       C       .       PASS    AA=C;DP=93      GT:GQ:DP        1|1:32:20       1|1:77:25       1|1:100:39
+7      69684611        rs17141782      C       A       .       PASS    AA=A;DP=106     GT:GQ:DP        1|1:32:21       0|0:25:23       1|0:100:63
+7      9115043 rs293154        A       G       .       PASS    AA=a;DP=106     GT:GQ:DP        1|1:32:21       0|1:100:29      1|0:100:53
+4      80820398        rs4286541       G       C       .       PASS    AA=C;DP=111     GT:GQ:DP        1|1:32:21       1|0:100:29      1|1:100:61
+6      170409633       rs3012372       T       G       .       PASS    AA=g;DP=98      GT:GQ:DP        1|1:32:22       0|0:38:18       1|0:100:56
+2      241370209       rs13386773      C       T       .       PASS    AA=c;DP=78      GT:GQ:DP        1|1:32:22       0|1:15:9        1|0:100:45
+1      57782344        rs2204376       T       G       .       PASS    AA=G;DP=90      GT:GQ:DP        1|1:32:23       0|1:44:14       1|0:100:53
+2      202571603       rs6435117       A       T       .       PASS    AA=A;DP=118     GT:GQ:DP        1|1:32:23       0|1:6:22        1|0:100:74
+3      167478796       rs12696239      A       G       .       PASS    AA=A;DP=97      GT:GQ:DP        1|1:32:23       1|0:100:19      1|1:70:39
+7      55153950        rs4947978       A       C       .       PASS    AA=C;DP=84      GT:GQ:DP        1|1:32:23       1|0:31:6        1|1:79:38
+8      103621589       rs13258245      T       C       .       PASS    AA=C;DP=104     GT:GQ:DP        1|1:32:24       0|0:45:16       1|0:100:64
+4      154578718       rs6851849       A       G       .       PASS    AA=G;DP=76      GT:GQ:DP        1|1:32:25       0|1:69:16       1|0:4:29
+11     24702434        rs2631437       C       G       .       PASS    AA=a;DP=115     GT:GQ:DP        1|1:32:25       0|1:70:26       1|0:100:64
+4      94694863        rs11947669      T       A       .       PASS    AA=A;DP=124     GT:GQ:DP        1|1:32:27       0|0:45:28       1|0:100:71
+12     583973  rs2535397       G       A       .       PASS    AA=g;DP=86      GT:GQ:DP        1|1:32:27       1|1:20:5        1|1:90:47
+7      90226438        rs3802016       T       C       .       PASS    AA=T;DP=105     GT:GQ:DP        1|1:32:29       0|0:63:25       1|0:100:42
+6      71200202        rs9455105       T       G       .       PASS    AA=G;DP=109     GT:GQ:DP        1|1:32:30       0|0:43:24       1|0:100:57
+14     51392466        rs2884136       T       C       .       PASS    AA=C;DP=115     GT:GQ:DP        1|1:32:30       0|0:54:20       1|0:100:66
+X      12712634        rs1731474       C       T       .       PASS    AA=C;DP=72      GT:GQ:DP        1|1:32:9        1|1:31:14       1|1:100:24
+X      25910922        rs4243531       G       C       .       PASS    AA=N;DP=79      GT:GQ:DP        1|1:32:9        1|1:47:15       1|1:100:25
+X      63657319        rs6524903       A       C       .       PASS    AA=C;DP=69      GT:GQ:DP        1|1:32:9        1|1:52:23       1|1:100:31
+X      127674358       rs4830086       G       C       .       PASS    AA=C;DP=80      GT:GQ:DP        1|1:32:9        1|1:56:17       1|1:100:28
+X      76103356        rs2057591       A       C       .       PASS    AA=C;DP=98      GT:GQ:DP        1|1:32:9        1|1:56:28       1|1:100:29
+X      149950055       rs5924859       T       A       .       PASS    AA=N;DP=80      GT:GQ:DP        1|1:32:9        1|1:62:20       1|1:100:34
+X      46714353        rs3135215       C       T       .       PASS    AA=-;DP=90      GT:GQ:DP        1|1:32:9        1|1:65:20       1|1:99:34
+X      148009968       rs5980644       A       T       .       PASS    AA=T;DP=128     GT:GQ:DP        1|1:32:9        1|1:68:21       1|1:100:51
+5      21540338        rs9292982       A       C       .       PASS    AA=.;DP=81      GT:GQ:DP        1|1:32:9        1|1:71:22       1|1:100:50
+11     97988875        rs4604847       C       T       .       PASS    AA=T;DP=64      GT:GQ:DP        1|1:32:9        1|1:71:22       1|1:92:33
+X      11803338        rs5935178       C       G       .       PASS    AA=G;DP=83      GT:GQ:DP        1|1:32:9        1|1:71:23       1|1:100:25
+X      26096969        rs971522        C       T       .       PASS    AA=N;DP=85      GT:GQ:DP        1|1:32:9        1|1:77:24       1|1:100:27
+X      92646388        .       C       T       .       PASS    AA=C;DP=89      GT:GQ:DP        1|1:32:9        1|1:80:26       1|1:100:29
+X      36213347        rs6629067       A       T       .       PASS    AA=T;DP=77      GT:GQ:DP        1|1:32:9        1|1:83:26       1|1:83:17
+X      77521581        rs321032        C       T       .       PASS    AA=C;DP=95      GT:GQ:DP        1|1:32:9        1|1:86:28       1|1:100:31
+X      144724191       rs7063240       A       G       .       PASS    AA=A;DP=101     GT:GQ:DP        1|1:33:11       1|0:100:17      1|1:100:43
+10     92645539        rs10881848      T       A       .       PASS    AA=A;DP=61      GT:GQ:DP        1|1:33:11       1|0:100:20      1|1:51:18
+X      17975655        rs58442116      G       A       .       PASS    AA=G;DP=107     GT:GQ:DP        1|1:33:11       1|0:100:23      1|1:100:36
+X      112265948       rs3116938       T       C       .       PASS    AA=C;DP=103     GT:GQ:DP        1|1:33:11       1|0:100:25      1|1:100:38
+9      74931317        rs10123956      A       T       .       PASS    AA=N;DP=89      GT:GQ:DP        1|1:33:11       1|0:100:25      1|1:100:46
+X      35890763        rs4446882       G       A       .       PASS    AA=A;DP=115     GT:GQ:DP        1|1:33:11       1|0:100:39      1|1:100:37
+9      17657126        rs7856894       T       A       .       PASS    AA=A;DP=67      GT:GQ:DP        1|1:33:11       1|0:30:18       1|1:100:37
+X      123656974       rs2206237       G       A       .       PASS    AA=A;DP=89      GT:GQ:DP        1|1:33:11       1|0:60:14       1|1:64:33
+X      86597135        rs5922447       C       T       .       PASS    AA=C;DP=100     GT:GQ:DP        1|1:33:11       1|0:77:23       1|1:100:40
+1      195125871       rs6428372       C       A       .       PASS    AA=C;DP=72;HM2  GT:GQ:DP        1|1:33:11       1|0:99:15       1|1:75:47
+X      12637282        rs4279777       G       C       .       PASS    AA=C;DP=103     GT:GQ:DP        1|1:33:12       0|1:100:19      1|0:100:33
+3      83030345        rs9867312       T       C       .       PASS    AA=C;DP=75      GT:GQ:DP        1|1:33:12       0|1:100:20      1|0:100:38
+X      55959712        .       T       A       .       PASS    AA=T;DP=106     GT:GQ:DP        1|1:33:12       0|1:100:20      1|0:100:40
+X      140221976       rs5954267       A       G       .       PASS    AA=A;DP=115     GT:GQ:DP        1|1:33:12       0|1:100:33      1|0:100:44
+X      31425269        rs5927759       A       G       .       PASS    AA=G;DP=93      GT:GQ:DP        1|1:33:12       0|1:27:20       1|0:100:31
+4      171749745       rs408625        C       T       .       PASS    AA=T;DP=71      GT:GQ:DP        1|1:33:12       0|1:46:14       1|0:100:46
+X      112967166       rs6643383       T       C       .       PASS    AA=C;DP=102     GT:GQ:DP        1|1:33:12       0|1:48:28       1|0:100:41
+4      67744562        rs6820443       G       T       .       PASS    AA=T;DP=71      GT:GQ:DP        1|1:33:12       0|1:73:11       1|0:100:48
+X      67810039        rs59390622      C       T       .       PASS    AA=C;DP=114     GT:GQ:DP        1|1:33:12       0|1:76:20       1|0:100:41
+8      3454444 rs2469335       G       A       .       PASS    AA=A;DP=87      GT:GQ:DP        1|1:33:12       0|1:87:19       1|0:100:53
+X      116417690       rs6646874       C       G       .       PASS    AA=C;DP=91      GT:GQ:DP        1|1:33:12       0|1:95:23       1|0:100:19
+3      96704399        rs11919152      C       T       .       PASS    AA=C;DP=70      GT:GQ:DP        1|1:33:12       1|0:100:19      1|1:75:39
+2      227899446       rs6722598       A       G       .       PASS    AA=A;DP=107     GT:GQ:DP        1|1:33:13       0|1:100:16      1|0:100:79
+4      47695882        rs3113878       G       A       .       PASS    AA=A;DP=72      GT:GQ:DP        1|1:33:13       0|1:57:13       1|0:100:36
+6      31413938        rs28752960      G       A       .       PASS    AA=a;DP=83      GT:GQ:DP        1|1:33:13       0|1:61:20       1|0:100:50
+10     118260772       rs4751990       A       G       .       PASS    AA=A;DP=72      GT:GQ:DP        1|1:33:13       0|1:99:20       1|0:100:37
+10     22957076        rs59403140      A       C       .       PASS    AA=A;DP=63      GT:GQ:DP        1|1:33:13       1|0:100:18      1|1:81:27
+4      61026429        rs10002172      A       G       .       PASS    AA=A;DP=63      GT:GQ:DP        1|1:33:14       0|1:34:14       1|0:100:26
+X      32201234        .       T       C       .       PASS    AA=T;DP=88      GT:GQ:DP        1|1:33:14       0|1:83:21       1|0:86:25
+5      4503216 rs7728824       C       T       .       PASS    AA=T;DP=61      GT:GQ:DP        1|1:33:14       1|0:100:14      1|1:69:28
+X      40245256        rs7056143       C       T       .       PASS    AA=C;DP=121     GT:GQ:DP        1|1:33:16       1|1:59:20       1|1:100:54
+13     54799932        rs1583559       A       T       .       PASS    AA=T;DP=93      GT:GQ:DP        1|1:33:17       1|0:100:26      1|1:100:50
+13     91949861        rs9561073       A       G       .       PASS    AA=G;DP=98      GT:GQ:DP        1|1:33:17       1|0:47:19       1|1:100:61
+12     77296463        rs10777941      C       A       .       PASS    AA=C;DP=103     GT:GQ:DP        1|1:33:18       0|0:66:22       1|0:100:63
+15     87753307        rs2350687       A       G       .       PASS    AA=A;DP=90      GT:GQ:DP        1|1:33:18       0|1:84:13       1|0:100:59
+20     3481083 .       C       T       .       PASS    AA=T;DP=69      GT:GQ:DP        1|1:33:19       1|1:11:10       1|1:100:41
+16     12558375        rs59699310      C       A       .       PASS    AA=c;DP=72      GT:GQ:DP        1|1:33:19       1|1:34:16       1|1:31:35
+3      53918266        rs6445613       T       C       .       PASS    AA=C;DP=95      GT:GQ:DP        1|1:33:19       1|1:50:15       1|1:100:62
+6      113502124       rs9320427       T       G       .       PASS    AA=T;DP=101     GT:GQ:DP        1|1:33:20       0|0:57:19       1|0:100:61
+1      209417002       rs1338355       A       C       .       PASS    AA=C;DP=112;HM2;HM3     GT:GQ:DP        1|1:33:20       1|0:100:26      1|1:100:70
+21     18158215        rs1489716       G       A       .       PASS    AA=A;DP=113     GT:GQ:DP        1|1:33:22       1|0:100:23      1|1:100:68
+14     63178101        rs8018194       G       C       .       PASS    AA=C;DP=82      GT:GQ:DP        1|1:33:22       1|0:72:17       1|1:85:40
+16     5825941 rs2164509       C       T       .       PASS    AA=T;DP=85      GT:GQ:DP        1|1:33:22       1|0:76:15       1|1:100:49
+16     64067067        rs60065006      G       A       .       PASS    AA=G;DP=110     GT:GQ:DP        1|1:33:22       1|0:76:28       1|1:100:60
+3      152841196       rs12493883      T       C       .       PASS    AA=T;DP=100     GT:GQ:DP        1|1:33:23       0|1:100:15      1|0:100:60
+15     21238801        .       C       A       .       PASS    AA=N;DP=108     GT:GQ:DP        1|1:33:23       0|1:73:19       1|0:100:72
+16     86512353        rs6540110       T       G       .       PASS    AA=N;DP=108     GT:GQ:DP        1|1:33:23       0|1:79:17       1|0:100:67
+1      237139976       rs9428766       A       G       .       PASS    AA=G;DP=103;HM2 GT:GQ:DP        1|1:33:23       0|1:81:21       1|0:100:57
+2      238726085       rs7589925       A       T       .       PASS    AA=T;DP=95      GT:GQ:DP        1|1:33:23       0|1:9:13        1|0:100:58
+14     21209034        rs60301742      A       C       .       PASS    AA=A;DP=98      GT:GQ:DP        1|1:33:24       0|0:22:21       1|0:100:53
+7      155338792       rs7456716       C       T       .       PASS    AA=C;DP=107     GT:GQ:DP        1|1:33:24       0|0:51:18       1|0:100:65
+5      152891096       rs4958659       C       G       .       PASS    AA=G;DP=100     GT:GQ:DP        1|1:33:24       0|0:57:22       1|0:100:42
+15     64251356        rs12914469      C       T       .       PASS    AA=C;DP=96      GT:GQ:DP        1|1:33:24       0|0:60:20       1|0:100:46
+12     65149372        rs11176206      G       A       .       PASS    AA=G;DP=124     GT:GQ:DP        1|1:33:24       0|0:60:21       1|0:100:67
+21     32176049        rs35835205      G       A       .       PASS    AA=A;DP=120     GT:GQ:DP        1|1:33:24       0|0:75:27       1|0:100:69
+X      154173063       rs10284191      G       A       .       PASS    AA=G;DP=122     GT:GQ:DP        1|1:33:24       0|0:87:30       1|0:100:38
+1      5236660 rs570572        T       G       .       PASS    AA=T;DP=130     GT:GQ:DP        1|1:33:24       0|1:87:18       1|0:100:87
+1      67838541        rs787510        T       C       .       PASS    AA=T;DP=128;HM2 GT:GQ:DP        1|1:33:28       1|1:97:38       1|1:100:50
+7      193306  rs4455777       A       C       .       PASS    AA=.;DP=103     GT:GQ:DP        1|1:33:29       1|1:38:19       1|1:90:54
+9      139099296       rs9411248       G       A       .       PASS    AA=A;DP=123     GT:GQ:DP        1|1:33:32       1|1:12:20       1|1:95:69
+4      64211986        .       G       A       .       PASS    AA=A;DP=69      GT:GQ:DP        1|1:34:13       0|0:16:16       1|0:100:40
+X      42589399        rs4986529       C       A       .       PASS    AA=c;DP=80      GT:GQ:DP        1|1:34:13       0|0:18:16       1|0:100:22
+X      3310881 rs5983140       A       G       .       PASS    AA=A;DP=87      GT:GQ:DP        1|1:34:13       0|0:27:11       1|0:100:30
+X      130388737       .       C       T       .       PASS    AA=C;DP=78      GT:GQ:DP        1|1:34:13       0|0:27:11       1|0:100:39
+14     41017578        rs7143973       T       C       .       PASS    AA=T;DP=83      GT:GQ:DP        1|1:34:13       0|0:30:10       1|0:100:59
+X      148143884       rs7887211       T       C       .       PASS    AA=C;DP=108     GT:GQ:DP        1|1:34:13       0|0:32:15       1|0:100:53
+X      12554636        rs5979692       C       G       .       PASS    AA=G;DP=122     GT:GQ:DP        1|1:34:13       0|0:35:20       1|0:100:37
+X      31856864        rs6631433       A       G       .       PASS    AA=A;DP=85      GT:GQ:DP        1|1:34:13       0|0:36:13       1|0:100:24
+10     7755345 rs11255281      G       C       .       PASS    AA=G;DP=122     GT:GQ:DP        1|1:34:13       0|0:39:13       1|0:100:49
+X      122755446       rs7877135       C       T       .       PASS    AA=t;DP=126     GT:GQ:DP        1|1:34:13       0|0:42:20       1|0:100:46
+8      132594357       rs273399        C       T       .       PASS    AA=C;DP=97      GT:GQ:DP        1|1:34:13       0|0:44:22       1|0:100:63
+6      103813716       rs12207117      T       C       .       PASS    AA=T;DP=70      GT:GQ:DP        1|1:34:13       0|0:45:16       1|0:100:40
+X      87663627        rs55777041      A       G       .       PASS    AA=A;DP=89      GT:GQ:DP        1|1:34:13       0|0:45:21       1|0:100:29
+14     87018626        rs10483999      T       C       .       PASS    AA=T;DP=101     GT:GQ:DP        1|1:34:13       0|0:51:17       1|0:100:73
+X      112172485       rs3116896       T       C       .       PASS    AA=T;DP=79      GT:GQ:DP        1|1:34:13       0|0:63:21       1|0:100:18
+X      135151615       rs5929746       C       T       .       PASS    AA=C;DP=86      GT:GQ:DP        1|1:34:13       0|0:63:21       1|0:100:28
+X      2993838 .       A       G       .       PASS    AA=G;DP=81      GT:GQ:DP        1|1:34:13       0|0:63:21       1|0:100:28
+10     33592413        rs2070299       G       A       .       PASS    AA=G;DP=92      GT:GQ:DP        1|1:34:13       0|0:63:21       1|0:100:58
+6      29140514        rs57010238      G       T       .       PASS    AA=G;DP=90      GT:GQ:DP        1|1:34:13       0|0:63:21       1|0:100:60
+10     66601657        rs12258285      A       G       .       PASS    AA=A;DP=103     GT:GQ:DP        1|1:34:13       0|0:63:21       1|0:100:66
+X      43484380        rs2072744       T       C       .       PASS    AA=T;DP=87      GT:GQ:DP        1|1:34:13       0|0:65:27       1|0:100:28
+X      75952573        .       T       A       .       PASS    AA=T;DP=103     GT:GQ:DP        1|1:34:13       0|0:66:22       1|0:100:33
+X      23025156        .       C       T       .       PASS    AA=c;DP=100     GT:GQ:DP        1|1:34:13       0|0:69:25       1|0:100:30
+X      144669440       .       T       C       .       PASS    AA=C;DP=116     GT:GQ:DP        1|1:34:13       0|0:78:27       1|0:100:47
+7      1437950 rs10263270      A       G       .       PASS    AA=a;DP=74      GT:GQ:DP        1|1:34:14       0|0:18:6        1|0:100:55
+X      118519124       rs430246        T       A       .       PASS    AA=T;DP=97      GT:GQ:DP        1|1:34:14       0|0:42:15       1|0:100:42
+12     96092126        rs1558734       T       C       .       PASS    AA=C;DP=101     GT:GQ:DP        1|1:34:14       0|0:51:19       1|0:100:67
+X      71329208        .       G       A       .       PASS    AA=g;DP=106     GT:GQ:DP        1|1:34:14       0|0:66:22       1|0:100:42
+X      30802413        rs5972253       A       C       .       PASS    AA=A;DP=110     GT:GQ:DP        1|1:34:14       0|0:84:28       1|0:100:35
+8      96550935        .       G       T       .       PASS    AA=T;DP=101     GT:GQ:DP        1|1:34:15       0|0:67:23       1|0:100:62
+11     100432070       rs492457        G       A       .       PASS    AA=N;DP=81      GT:GQ:DP        1|1:34:15       0|1:100:25      1|0:100:41
+6      90522347        rs6942026       T       G       .       PASS    AA=T;DP=83      GT:GQ:DP        1|1:34:15       1|1:53:16       1|1:100:52
+16     75083722        rs11149906      C       T       .       PASS    AA=C;DP=89      GT:GQ:DP        1|1:34:15       1|1:72:25       1|1:100:44
+X      123125961       rs1279779       A       T       .       PASS    AA=T;DP=119     GT:GQ:DP        1|1:34:16       0|0:100:38      1|0:100:36
+X      139559088       rs62609052      T       A       .       PASS    AA=A;DP=108     GT:GQ:DP        1|1:34:16       0|0:57:27       1|0:100:40
+X      50241623        rs59255420      C       A       .       PASS    AA=A;DP=104     GT:GQ:DP        1|1:34:16       1|1:13:12       1|1:99:39
+7      53151304        rs2330277       T       G       .       PASS    AA=.;DP=65      GT:GQ:DP        1|1:34:16       1|1:38:12       1|1:100:36
+7      154115560       rs10225932      T       A       .       PASS    AA=A;DP=79      GT:GQ:DP        1|1:34:16       1|1:7:18        1|1:97:36
+19     45807754        .       T       C       .       PASS    AA=C;DP=66      GT:GQ:DP        1|1:34:17       1|0:10:5        1|1:100:38
+4      164137266       rs13118643      C       T       .       PASS    AA=C;DP=77      GT:GQ:DP        1|1:34:18       0|1:30:14       1|0:100:46
+4      180407332       .       C       T       .       PASS    AA=C;DP=116     GT:GQ:DP        1|1:34:19       0|0:72:24       1|0:100:76
+16     81638602        rs60179004      G       A       .       PASS    AA=A;DP=85      GT:GQ:DP        1|1:34:19       0|1:74:13       1|0:100:54
+4      157090787       rs6832480       T       A       .       PASS    AA=T;DP=100     GT:GQ:DP        1|1:34:19       1|0:84:25       1|1:98:55
+1      104512069       rs4847158       C       G       .       PASS    AA=G;DP=82      GT:GQ:DP        1|1:34:19       1|1:44:13       1|1:100:48
+6      19581845        rs9368081       C       T       .       PASS    AA=T;DP=89      GT:GQ:DP        1|1:34:19       1|1:68:21       1|1:100:40
+2      204858985       rs4675447       A       T       .       PASS    AA=T;DP=84      GT:GQ:DP        1|1:34:19       1|1:68:22       1|1:100:43
+13     94476354        .       T       C       .       PASS    AA=T;DP=88      GT:GQ:DP        1|1:34:20       0|0:39:14       1|0:100:55
+11     99265441        rs7104369       G       T       .       PASS    AA=T;DP=82      GT:GQ:DP        1|1:34:20       1|1:26:16       1|1:83:44
+11     117265897       rs7927116       G       A       .       PASS    AA=A;DP=101     GT:GQ:DP        1|1:34:20       1|1:68:21       1|1:100:61
+6      128217194       rs270031        A       C       .       PASS    AA=A;DP=105     GT:GQ:DP        1|1:34:21       0|1:100:27      1|0:100:61
+1      82347387        rs4970668       T       G       .       PASS    AA=T;DP=112;HM2;HM3     GT:GQ:DP        1|1:34:22       0|0:78:28       1|0:100:56
+7      70791255        rs4719166       C       A       .       PASS    AA=A;DP=102     GT:GQ:DP        1|1:34:22       1|0:98:16       1|1:100:65
+7      43032656        .       G       T       .       PASS    AA=g;DP=95      GT:GQ:DP        1|1:34:24       0|0:19:17       1|0:100:54
+14     102401343       rs10144464      A       T       .       PASS    AA=A;DP=96      GT:GQ:DP        1|1:34:24       1|0:100:17      1|1:100:57
+11     8184618 rs4758312       G       T       .       PASS    AA=G;DP=81      GT:GQ:DP        1|1:34:25       1|1:15:10       1|1:93:39
+2      27362536        rs4665376       T       C       .       PASS    AA=t;DP=110     GT:GQ:DP        1|1:34:27       0|1:58:30       1|0:100:52
+6      13788755        rs204228        A       G       .       PASS    AA=N;DP=115     GT:GQ:DP        1|1:34:28       0|0:69:23       1|0:100:52
+3      46494312        rs60983021      T       G       .       PASS    AA=G;DP=126     GT:GQ:DP        1|1:34:29       0|1:43:24       1|0:100:75
+X      68796641        rs1359798       C       A       .       PASS    AA=A;DP=70      GT:GQ:DP        1|1:35:10       1|1:34:17       1|1:82:17
+X      35746689        rs2335999       A       G       .       PASS    AA=G;DP=61      GT:GQ:DP        1|1:35:10       1|1:41:18       1|1:73:14
+X      36847748        rs62588492      A       T       .       PASS    AA=T;DP=68      GT:GQ:DP        1|1:35:10       1|1:44:14       1|1:100:27
+X      136115280       rs6654163       T       C       .       PASS    AA=t;DP=80      GT:GQ:DP        1|1:35:10       1|1:44:14       1|1:100:30
+X      94454577        rs5949556       G       A       .       PASS    AA=g;DP=70      GT:GQ:DP        1|1:35:10       1|1:50:15       1|1:100:23
+1      79362021        rs1487558       C       T       .       PASS    AA=T;DP=71;HM2  GT:GQ:DP        1|1:35:10       1|1:50:15       1|1:100:46
+3      164478890       rs4855249       T       C       .       PASS    AA=C;DP=63      GT:GQ:DP        1|1:35:10       1|1:50:16       1|1:100:23
+X      131598572       rs858620        A       G       .       PASS    AA=G;DP=106     GT:GQ:DP        1|1:35:10       1|1:50:25       1|1:100:49
+X      86467002        rs635506        G       A       .       PASS    AA=A;DP=58      GT:GQ:DP        1|1:35:10       1|1:53:16       1|1:74:13
+X      91386937        rs382096        C       G       .       PASS    AA=G;DP=76      GT:GQ:DP        1|1:35:10       1|1:62:19       1|1:100:22
+5      39998582        rs1697894       C       T       .       PASS    AA=T;DP=67      GT:GQ:DP        1|1:35:10       1|1:62:20       1|1:100:37
+X      144449844       rs1174258       G       A       .       PASS    AA=A;DP=94      GT:GQ:DP        1|1:35:10       1|1:64:27       1|1:100:34
+X      116723462       rs4825536       T       C       .       PASS    AA=C;DP=78      GT:GQ:DP        1|1:35:10       1|1:65:22       1|1:100:31
+X      42431601        rs2379628       T       C       .       PASS    AA=C;DP=82      GT:GQ:DP        1|1:35:10       1|1:68:21       1|1:88:29
+X      110245291       rs5942719       T       C       .       PASS    AA=C;DP=84      GT:GQ:DP        1|1:35:10       1|1:68:22       1|1:100:31
+15     63762852        rs6494532       C       T       .       PASS    AA=T;DP=89      GT:GQ:DP        1|1:35:10       1|1:68:22       1|1:100:58
+X      80943039        rs12394039      C       T       .       PASS    AA=T;DP=72      GT:GQ:DP        1|1:35:10       1|1:69:22       1|1:100:22
+X      142699277       rs5908796       A       G       .       PASS    AA=G;DP=93      GT:GQ:DP        1|1:35:10       1|1:71:22       1|1:100:37
+X      85350873        rs5968827       T       C       .       PASS    AA=t;DP=115     GT:GQ:DP        1|1:35:10       1|1:74:29       1|1:100:44
+X      114613792       rs5987905       A       T       .       PASS    AA=T;DP=78      GT:GQ:DP        1|1:35:10       1|1:89:28       1|1:78:24
+X      34685843        rs11095358      A       G       .       PASS    AA=G;DP=76      GT:GQ:DP        1|1:35:11       1|1:62:20       1|1:98:22
+X      32622278        rs6527219       C       T       .       PASS    AA=T;DP=103     GT:GQ:DP        1|1:35:11       1|1:71:22       1|1:100:33
+X      28303725        rs5985909       G       A       .       PASS    AA=G;DP=93      GT:GQ:DP        1|1:35:11       1|1:86:28       1|1:95:20
+5      49909255        rs962424        A       G       .       PASS    AA=A;DP=75      GT:GQ:DP        1|1:35:15       1|1:12:11       1|1:100:49
+3      16466902        rs9867980       T       C       .       PASS    AA=C;DP=94      GT:GQ:DP        1|1:35:17       1|1:80:27       1|1:100:36
+2      228319902       rs4973284       T       A       .       PASS    AA=A;DP=78      GT:GQ:DP        1|1:35:18       1|0:73:10       1|1:75:25
+3      146430039       rs9850108       G       T       .       PASS    AA=T;DP=85      GT:GQ:DP        1|1:35:18       1|1:8:8 1|1:100:59
+21     17936707        rs1473803       G       T       .       PASS    AA=T;DP=108     GT:GQ:DP        1|1:35:19       0|1:90:15       1|0:100:73
+1      191088243       rs1231740       C       A       .       PASS    AA=A;DP=99      GT:GQ:DP        1|1:35:19       1|1:68:22       1|1:100:59
+3      67229166        rs4241446       C       T       .       PASS    AA=T;DP=129     GT:GQ:DP        1|1:35:20       0|1:100:39      1|0:100:69
+9      7030733 rs843894        A       G       .       PASS    AA=G;DP=111     GT:GQ:DP        1|1:35:20       0|1:70:17       1|0:100:75
+6      146910702       rs3804286       T       G       .       PASS    AA=T;DP=107     GT:GQ:DP        1|1:35:21       1|1:38:19       1|1:100:64
+2      54605998        rs4592889       A       T       .       PASS    AA=T;DP=65      GT:GQ:DP        1|1:35:21       1|1:41:12       1|1:72:24
+2      19217774        rs1121180       C       T       .       PASS    AA=T;DP=93      GT:GQ:DP        1|1:35:21       1|1:47:14       1|1:100:48
+4      175014388       rs7690356       T       C       .       PASS    AA=C;DP=99      GT:GQ:DP        1|1:35:21       1|1:50:16       1|1:100:61
+3      143239231       rs1543064       C       T       .       PASS    AA=T;DP=73      GT:GQ:DP        1|1:35:21       1|1:59:18       1|1:100:35
+14     97778303        rs6575646       T       C       .       PASS    AA=C;DP=103     GT:GQ:DP        1|1:35:21       1|1:65:20       1|1:100:61
+8      43312419        rs7015918       T       G       .       PASS    AA=G;DP=104     GT:GQ:DP        1|1:35:21       1|1:75:31       1|1:100:52
+13     108623225       rs480875        G       C       .       PASS    AA=C;DP=111     GT:GQ:DP        1|1:35:21       1|1:89:29       1|1:100:61
+1      101489217       rs1406866       A       G       .       PASS    AA=G;DP=117     GT:GQ:DP        1|1:35:22       1|1:77:25       1|1:100:71
+20     11611776        rs61523268      C       A       .       PASS    AA=C;DP=97      GT:GQ:DP        1|1:35:24       0|0:63:21       1|0:100:53
+6      8027503 rs2815165       G       A       .       PASS    AA=A;DP=97      GT:GQ:DP        1|1:35:24       0|1:100:18      1|0:100:54
+6      124186101       rs9482468       C       T       .       PASS    AA=T;DP=107     GT:GQ:DP        1|1:35:24       0|1:100:24      1|0:100:57
+10     60226865        rs2393504       G       A       .       PASS    AA=A;DP=106     GT:GQ:DP        1|1:35:24       0|1:45:22       1|0:100:57
+11     5770929 rs7946572       G       C       .       PASS    AA=G;DP=92      GT:GQ:DP        1|1:35:24       0|1:47:12       1|0:100:56
+17     56232585        rs28866273      T       C       .       PASS    AA=C;DP=122     GT:GQ:DP        1|1:35:24       0|1:55:21       1|0:100:25
+19     34752253        rs12610870      G       A       .       PASS    AA=G;DP=79      GT:GQ:DP        1|1:35:24       0|1:93:15       1|0:100:34
+10     77820291        rs11001765      C       A       .       PASS    AA=C;DP=114     GT:GQ:DP        1|1:35:25       1|1:17:19       1|1:100:63
+4      153146468       rs7664610       A       C       .       PASS    AA=C;DP=110     GT:GQ:DP        1|1:35:25       1|1:54:22       1|1:100:64
+8      69071123        rs11785853      C       T       .       PASS    AA=T;DP=90      GT:GQ:DP        1|1:35:26       0|0:45:15       1|0:100:47
+2      108790547       .       C       T       .       PASS    AA=C;DP=86      GT:GQ:DP        1|1:35:28       1|1:30:17       1|1:64:29
+14     105034989       rs4983426       C       T       .       PASS    AA=C;DP=107     GT:GQ:DP        1|1:35:29       0|0:39:14       1|0:100:64
+3      47330549        .       C       G       .       PASS    AA=C;DP=105     GT:GQ:DP        1|1:35:32       0|0:57:19       1|0:100:47
+7      13248126        rs9639147       A       G       .       PASS    AA=A;DP=67      GT:GQ:DP        1|1:36:11       1|1:52:22       1|1:100:34
+11     25250805        rs9299988       C       G       .       PASS    AA=C;DP=64      GT:GQ:DP        1|1:36:12       1|0:100:15      1|1:78:26
+10     67326486        rs4474330       T       G       .       PASS    AA=G;DP=92      GT:GQ:DP        1|1:36:12       1|0:100:17      1|1:100:62
+X      151939360       rs60785259      C       T       .       PASS    AA=N;DP=82      GT:GQ:DP        1|1:36:12       1|0:100:17      1|1:57:19
+12     29023602        rs10771458      G       A       .       PASS    AA=G;DP=56      GT:GQ:DP        1|1:36:12       1|0:100:17      1|1:66:22
+X      111108036       .       G       A       .       PASS    AA=G;DP=91      GT:GQ:DP        1|1:36:12       1|0:100:17      1|1:93:31
+1      232557577       rs3001701       C       A       .       PASS    AA=-;DP=55      GT:GQ:DP        1|1:36:12       1|0:100:20      1|1:60:20
+3      188729158       rs2553993       T       C       .       PASS    AA=T;DP=81      GT:GQ:DP        1|1:36:12       1|0:42:17       1|1:100:52
+X      140578851       rs59092255      G       A       .       PASS    AA=.;DP=104     GT:GQ:DP        1|1:36:12       1|0:89:30       1|1:98:39
+X      68347300        rs5936669       T       C       .       PASS    AA=C;DP=69      GT:GQ:DP        1|1:36:12       1|0:90:11       1|1:93:31
+X      127765647       rs1981460       C       T       .       PASS    AA=T;DP=116     GT:GQ:DP        1|1:36:12       1|0:95:32       1|1:100:41
+15     93916510        rs7166462       G       A       .       PASS    AA=A;DP=74      GT:GQ:DP        1|1:36:13       0|1:100:12      1|0:100:50
+4      86681825        .       G       A       .       PASS    AA=G;DP=80      GT:GQ:DP        1|1:36:13       0|1:100:17      1|0:100:45
+X      138881850       rs59709594      T       C       .       PASS    AA=T;DP=105     GT:GQ:DP        1|1:36:13       0|1:100:18      1|0:100:32
+X      41170639        rs1721671       T       C       .       PASS    AA=N;DP=104     GT:GQ:DP        1|1:36:13       0|1:100:19      1|0:100:40
+X      137263481       rs2153651       G       A       .       PASS    AA=A;DP=89      GT:GQ:DP        1|1:36:13       0|1:100:23      1|0:100:35
+X      141208290       rs59173904      C       T       .       PASS    AA=c;DP=108     GT:GQ:DP        1|1:36:13       0|1:100:25      1|0:100:39
+10     9208118 rs11256081      A       G       .       PASS    AA=A;DP=90      GT:GQ:DP        1|1:36:13       0|1:73:19       1|0:100:55
+5      111716247       rs987765        T       A       .       PASS    AA=A;DP=91      GT:GQ:DP        1|1:36:13       0|1:75:22       1|0:100:52
+X      122397978       rs498126        T       C       .       PASS    AA=C;DP=116     GT:GQ:DP        1|1:36:13       0|1:85:21       1|0:100:43
+X      79016244        rs5959589       A       G       .       PASS    AA=A;DP=108     GT:GQ:DP        1|1:36:13       1|0:100:18      1|1:100:43
+3      24817171        rs6797810       C       T       .       PASS    AA=T;DP=70      GT:GQ:DP        1|1:36:13       1|0:42:14       1|1:75:42
+4      157834175       rs4146700       A       G       .       PASS    AA=G;DP=106     GT:GQ:DP        1|1:36:14       0|1:100:24      1|0:100:66
+12     59091986        rs2062868       T       C       .       PASS    AA=T;DP=71      GT:GQ:DP        1|1:36:14       0|1:46:11       1|0:100:43
+8      115928384       rs6980794       A       G       .       PASS    AA=A;DP=89      GT:GQ:DP        1|1:36:14       0|1:99:25       1|0:100:45
+7      70847541        rs2159696       A       C       .       PASS    AA=A;DP=92      GT:GQ:DP        1|1:36:14       1|1:11:15       1|1:94:56
+18     67935032        rs8094563       T       C       .       PASS    AA=T;DP=101     GT:GQ:DP        1|1:36:14       1|1:87:30       1|1:100:45
+6      133974936       .       C       A       .       PASS    AA=C;DP=88      GT:GQ:DP        1|1:36:15       0|1:38:23       1|0:100:51
+5      73403994        rs286641        T       C       .       PASS    AA=T;DP=109     GT:GQ:DP        1|1:36:15       0|1:84:17       1|0:100:35
+5      66918598        .       A       C       .       PASS    AA=A;DP=82      GT:GQ:DP        1|1:36:16       1|1:31:18       1|1:100:47
+12     10629819        rs4763532       C       T       .       PASS    AA=c;DP=90      GT:GQ:DP        1|1:36:16       1|1:71:22       1|1:100:50
+7      24182668        rs156312        C       A       .       PASS    AA=A;DP=65      GT:GQ:DP        1|1:36:18       1|1:59:18       1|1:100:24
+3      157353878       rs9828163       G       A       .       PASS    AA=G;DP=119     GT:GQ:DP        1|1:36:19       0|0:75:26       1|0:100:71
+X      75079006        rs1604773       A       G       .       PASS    AA=N;DP=88      GT:GQ:DP        1|1:36:19       0|1:68:24       1|0:100:25
+5      51991461        rs351959        T       C       .       PASS    AA=C;DP=84      GT:GQ:DP        1|1:36:19       1|1:41:12       1|1:69:50
+14     41479723        rs55997856      T       A       .       PASS    AA=A;DP=115     GT:GQ:DP        1|1:36:20       0|0:75:27       1|0:100:54
+11     129064901       rs10894111      T       A       .       PASS    AA=T;DP=98      GT:GQ:DP        1|1:36:20       0|1:100:25      1|0:100:51
+2      38587914        rs7594253       G       A       .       PASS    AA=G;DP=91      GT:GQ:DP        1|1:36:23       0|0:51:17       1|0:100:49
+3      29449285        .       A       G       .       PASS    AA=A;DP=110     GT:GQ:DP        1|1:36:23       0|0:63:21       1|0:100:64
+9      87614029        .       C       T       .       PASS    AA=C;DP=106     GT:GQ:DP        1|1:36:23       0|0:72:24       1|0:100:58
+12     41220599        rs2708033       T       G       .       PASS    AA=G;DP=100     GT:GQ:DP        1|1:36:23       1|0:100:27      1|1:100:51
+14     105970838       rs4774122       C       T       .       PASS    AA=c;DP=77      GT:GQ:DP        1|1:36:23       1|0:11:9        1|1:99:42
+7      13172268        rs2357202       T       C       .       PASS    AA=t;DP=80      GT:GQ:DP        1|1:36:23       1|0:53:9        1|1:100:47
+6      152769024       rs127196        C       A       .       PASS    AA=C;DP=85      GT:GQ:DP        1|1:36:23       1|0:84:19       1|1:87:43
+6      139179219       rs4896406       T       G       .       PASS    AA=G;DP=118     GT:GQ:DP        1|1:36:23       1|1:58:32       1|1:56:62
+2      146289907       rs766139        A       G       .       PASS    AA=G;DP=99      GT:GQ:DP        1|1:36:24       1|1:50:31       1|1:100:32
+2      34491761        rs59484966      C       G       .       PASS    AA=C;DP=104     GT:GQ:DP        1|1:36:25       0|0:38:24       1|0:100:46
+9      124416663       rs972926        T       C       .       PASS    AA=N;DP=99      GT:GQ:DP        1|1:36:25       0|0:57:19       1|0:100:54
+8      135112746       rs10093449      A       G       .       PASS    AA=N;DP=114     GT:GQ:DP        1|1:36:25       0|0:60:20       1|0:100:70
+11     125108745       rs1365080       A       C       .       PASS    AA=A;DP=127     GT:GQ:DP        1|1:36:25       0|0:84:29       1|0:100:26
+18     24640470        rs1714025       A       G       .       PASS    AA=A;DP=109     GT:GQ:DP        1|1:36:27       1|1:42:20       1|1:100:60
+1      114202327       rs1217416       C       T       .       PASS    AA=T;DP=97      GT:GQ:DP        1|1:36:28       1|1:19:20       1|1:100:37
+8      11365592        rs2736324       G       C       .       PASS    AA=G;DP=158     GT:GQ:DP        1|1:36:30       0|1:85:25       1|0:100:55
+1      89428371        rs1831240       T       C       .       PASS    AA=T;DP=128;HM2 GT:GQ:DP        1|1:36:33       0|0:66:23       1|0:100:72
+19     21376217        rs8102235       G       C       .       PASS    AA=C;DP=67      GT:GQ:DP        1|1:37:11       1|1:13:12       1|1:72:28
+9      8471602 rs10511497      G       C       .       PASS    AA=C;DP=85      GT:GQ:DP        1|1:37:14       0|0:21:8        1|0:100:65
+10     42197834        .       G       T       .       PASS    AA=.;DP=89      GT:GQ:DP        1|1:37:14       0|0:31:20       1|0:100:55
+X      145542107       rs6525719       A       C       .       PASS    AA=A;DP=95      GT:GQ:DP        1|1:37:14       0|0:32:26       1|0:100:23
+18     26228449        rs58797241      G       C       .       PASS    AA=G;DP=85      GT:GQ:DP        1|1:37:14       0|0:33:12       1|0:100:60
+13     22868639        rs9634391       T       C       .       PASS    AA=-;DP=75      GT:GQ:DP        1|1:37:14       0|0:40:19       1|0:100:42
+5      50753973        rs10454819      G       A       .       PASS    AA=G;DP=78      GT:GQ:DP        1|1:37:14       0|0:42:14       1|0:100:50
+6      77923402        .       C       A       .       PASS    AA=C;DP=79      GT:GQ:DP        1|1:37:14       0|0:43:20       1|0:100:42
+8      134139664       rs2739138       G       A       .       PASS    AA=G;DP=82      GT:GQ:DP        1|1:37:14       0|0:45:15       1|0:100:53
+14     59543430        .       C       T       .       PASS    AA=C;DP=88      GT:GQ:DP        1|1:37:14       0|0:45:15       1|0:100:61
+18     47851808        rs11877716      C       A       .       PASS    AA=C;DP=83      GT:GQ:DP        1|1:37:14       0|0:46:19       1|0:100:49
+8      2902584 rs13278147      A       G       .       PASS    AA=A;DP=95      GT:GQ:DP        1|1:37:14       0|0:48:16       1|0:100:63
+X      107181637       rs812080        A       G       .       PASS    AA=a;DP=83      GT:GQ:DP        1|1:37:14       0|0:51:17       1|0:100:26
+X      154546122       .       A       G       .       PASS    AA=A;DP=91      GT:GQ:DP        1|1:37:14       0|0:51:17       1|0:100:30
+10     56368439        .       T       C       .       PASS    AA=T;DP=76      GT:GQ:DP        1|1:37:14       0|0:51:17       1|0:100:32
+7      57507563        .       G       T       .       PASS    AA=G;DP=79      GT:GQ:DP        1|1:37:14       0|0:54:18       1|0:100:48
+X      10451959        rs7065052       A       G       .       PASS    AA=G;DP=107     GT:GQ:DP        1|1:37:14       0|0:57:19       1|0:100:28
+3      97091085        rs56258914      A       G       .       PASS    AA=A;DP=95      GT:GQ:DP        1|1:37:14       0|0:57:20       1|0:100:61
+X      36023852        .       C       G       .       PASS    AA=C;DP=106     GT:GQ:DP        1|1:37:14       0|0:58:31       1|0:100:42
+X      107661978       .       A       C       .       PASS    AA=C;DP=121     GT:GQ:DP        1|1:37:14       0|0:58:35       1|0:100:36
+X      74564005        rs2367108       G       C       .       PASS    AA=G;DP=110     GT:GQ:DP        1|1:37:14       0|0:60:21       1|0:100:40
+4      132033250       .       T       C       .       PASS    AA=T;DP=104     GT:GQ:DP        1|1:37:14       0|0:60:22       1|0:100:68
+X      3211301 rs5983103       G       A       .       PASS    AA=G;DP=100     GT:GQ:DP        1|1:37:14       0|0:61:26       1|0:100:38
+X      4264720 .       A       T       .       PASS    AA=.;DP=121     GT:GQ:DP        1|1:37:14       0|0:61:30       1|0:100:39
+4      116334012       rs28587730      G       T       .       PASS    AA=G;DP=69      GT:GQ:DP        1|1:37:14       0|0:63:22       1|0:100:26
+X      16522073        .       T       C       .       PASS    AA=C;DP=105     GT:GQ:DP        1|1:37:14       0|0:69:23       1|0:100:33
+3      150385545       rs35062355      G       A       .       PASS    AA=g;DP=85      GT:GQ:DP        1|1:37:14       0|0:72:24       1|0:100:49
+X      72775087        .       T       G       .       PASS    AA=T;DP=83      GT:GQ:DP        1|1:37:14       0|0:78:27       1|0:100:25
+X      153832439       rs28406257      C       T       .       PASS    AA=C;DP=90      GT:GQ:DP        1|1:37:14       0|0:81:27       1|0:100:22
+X      151103601       rs5969866       A       G       .       PASS    AA=N;DP=94      GT:GQ:DP        1|1:37:14       0|0:84:29       1|0:100:33
+X      67512116        .       T       C       .       PASS    AA=T;DP=102     GT:GQ:DP        1|1:37:14       0|0:87:29       1|0:100:34
+X      17466894        rs12392758      G       A       .       PASS    AA=G;DP=143     GT:GQ:DP        1|1:37:14       0|0:93:32       1|0:100:45
+X      117486408       rs5956063       A       T       .       PASS    AA=N;DP=115     GT:GQ:DP        1|1:37:14       1|1:56:21       1|1:100:46
+X      107572766       rs59514209      T       C       .       PASS    AA=C;DP=105     GT:GQ:DP        1|1:37:15       0|0:81:27       1|0:100:36
+10     30586676        rs599460        C       T       .       PASS    AA=T;DP=93      GT:GQ:DP        1|1:37:15       0|0:84:28       1|0:100:49
+X      149393395       rs1209025       G       C       .       PASS    AA=C;DP=148     GT:GQ:DP        1|1:37:15       0|0:84:29       1|0:100:56
+1      149735558       rs59678434      A       G       .       PASS    AA=A;DP=83      GT:GQ:DP        1|1:37:16       0|0:36:12       1|0:100:56
+14     87484036        rs398343        G       A       .       PASS    AA=A;DP=84      GT:GQ:DP        1|1:37:16       1|1:50:15       1|1:100:54
+X      115101893       .       A       G       .       PASS    AA=A;DP=108     GT:GQ:DP        1|1:37:17       0|0:60:20       1|0:100:36
+2      107603446       rs61578130      G       A       .       PASS    AA=A;DP=90      GT:GQ:DP        1|1:37:17       0|0:72:24       1|0:100:48
+5      18169914        rs395234        T       C       .       PASS    AA=t;DP=100     GT:GQ:DP        1|1:37:18       1|0:100:19      1|1:100:58
+14     38111043        rs10136113      T       C       .       PASS    AA=C;DP=94      GT:GQ:DP        1|1:37:18       1|0:52:21       1|1:100:42
+6      122440109       rs7738997       A       G       .       PASS    AA=A;DP=79      GT:GQ:DP        1|1:37:19       1|0:100:11      1|1:90:47
+11     115482463       rs11215795      G       C       .       PASS    AA=C;DP=73      GT:GQ:DP        1|1:37:20       0|1:100:18      1|0:100:27
+15     21948712        rs1850475       T       C       .       PASS    AA=.;DP=99      GT:GQ:DP        1|1:37:20       0|1:85:24       1|0:100:56
+14     70111255        rs60555424      T       C       .       PASS    AA=T;DP=112     GT:GQ:DP        1|1:37:21       0|0:22:18       1|0:100:69
+7      109531379       rs61054869      G       T       .       PASS    AA=G;DP=106     GT:GQ:DP        1|1:37:21       0|0:36:24       1|0:100:60
+12     45464074        rs4768759       G       A       .       PASS    AA=G;DP=98      GT:GQ:DP        1|1:37:21       0|0:51:19       1|0:100:57
+9      11193942        .       T       G       .       PASS    AA=T;DP=117     GT:GQ:DP        1|1:37:21       1|0:100:24      1|1:100:75
+8      15206966        rs7833064       T       C       .       PASS    AA=T;DP=108     GT:GQ:DP        1|1:37:21       1|1:47:21       1|1:100:69
+5      96268622        rs33934033      G       A       .       PASS    AA=G;DP=104     GT:GQ:DP        1|1:37:21       1|1:74:24       1|1:100:61
+5      76651447        rs2359797       G       A       .       PASS    AA=A;DP=108     GT:GQ:DP        1|1:37:21       1|1:74:24       1|1:100:63
+15     36355298        rs2056508       G       A       .       PASS    AA=A;DP=120     GT:GQ:DP        1|1:37:22       0|0:45:22       1|0:100:79
+11     50367158        rs11245675      G       A       .       PASS    AA=.;DP=120     GT:GQ:DP        1|1:37:22       0|0:65:29       1|0:100:71
+6      44604823        rs7740330       C       T       .       PASS    AA=T;DP=110     GT:GQ:DP        1|1:37:22       0|0:66:22       1|0:100:65
+10     80670895        rs1749851       T       C       .       PASS    AA=C;DP=117     GT:GQ:DP        1|1:37:22       1|0:97:19       1|1:100:74
+15     89533196        rs8031077       C       G       .       PASS    AA=G;DP=74      GT:GQ:DP        1|1:37:22       1|1:11:15       1|1:55:38
+7      156290663       rs28811958      T       C       .       PASS    AA=t;DP=102     GT:GQ:DP        1|1:37:23       0|1:100:26      1|0:100:52
+3      113777409       rs2933139       T       G       .       PASS    AA=G;DP=93      GT:GQ:DP        1|1:37:23       1|1:19:25       1|1:100:47
+5      35941153        .       T       G       .       PASS    AA=T;DP=121     GT:GQ:DP        1|1:37:25       0|0:46:21       1|0:100:73
+8      15755428        rs56187028      A       G       .       PASS    AA=A;DP=118     GT:GQ:DP        1|1:37:26       0|0:51:17       1|0:100:77
+6      42872492        rs2150913       A       G       .       PASS    AA=a;DP=94      GT:GQ:DP        1|1:37:26       1|1:22:27       1|1:76:31
+4      135595848       rs1486998       A       C       .       PASS    AA=C;DP=117     GT:GQ:DP        1|1:37:26       1|1:35:23       1|1:100:72
+9      131779208       rs2146351       G       C       .       PASS    AA=G;DP=104     GT:GQ:DP        1|1:37:28       1|1:31:19       1|1:100:57
+12     56829075        rs12819558      T       C       .       PASS    AA=T;DP=100     GT:GQ:DP        1|1:37:29       1|0:80:20       1|1:35:50
+5      67430796        rs60302752      A       G       .       PASS    AA=A;DP=118     GT:GQ:DP        1|1:37:30       1|1:14:17       1|1:100:68
+5      66424155        rs2545387       A       C       .       PASS    AA=A;DP=97      GT:GQ:DP        1|1:37:30       1|1:23:11       1|1:100:50
+17     5322926 rs3888575       C       T       .       PASS    AA=C;DP=101     GT:GQ:DP        1|1:37:30       1|1:80:26       1|1:100:38
+5      114288518       rs4346763       A       G       .       PASS    AA=G;DP=52      GT:GQ:DP        1|1:38:11       1|1:16:14       1|1:79:21
+X      114981430       rs5950604       A       G       .       PASS    AA=G;DP=110     GT:GQ:DP        1|1:38:11       1|1:18:15       1|1:100:50
+X      142479739       rs4487918       T       C       .       PASS    AA=C;DP=83      GT:GQ:DP        1|1:38:11       1|1:21:16       1|1:100:29
+21     14304357        rs1297099       T       G       .       PASS    AA=G;DP=84      GT:GQ:DP        1|1:38:11       1|1:23:6        1|1:100:66
+6      42293542        rs9471809       A       C       .       PASS    AA=C;DP=58      GT:GQ:DP        1|1:38:11       1|1:29:8        1|1:100:29
+X      27347207        rs12687682      A       C       .       PASS    AA=C;DP=116     GT:GQ:DP        1|1:38:11       1|1:31:19       1|1:100:50
+8      116832606       rs59292265      C       T       .       PASS    AA=T;DP=84      GT:GQ:DP        1|1:38:11       1|1:36:18       1|1:100:55
+15     96130107        rs2063118       A       T       .       PASS    AA=T;DP=97      GT:GQ:DP        1|1:38:11       1|1:36:20       1|1:100:53
+X      45495475        rs974704        G       A       .       PASS    AA=A;DP=85      GT:GQ:DP        1|1:38:11       1|1:41:12       1|1:100:35
+X      25988157        rs5944280       T       C       .       PASS    AA=t;DP=86      GT:GQ:DP        1|1:38:11       1|1:44:13       1|1:100:31
+X      80569045        rs2806645       A       G       .       PASS    AA=G;DP=74      GT:GQ:DP        1|1:38:11       1|1:47:17       1|1:100:21
+1      229321100       rs10864670      A       G       .       PASS    AA=G;DP=88;HM2  GT:GQ:DP        1|1:38:11       1|1:50:15       1|1:100:59
+8      134863282       rs4327845       G       T       .       PASS    AA=T;DP=64      GT:GQ:DP        1|1:38:11       1|1:53:16       1|1:100:36
+18     64226408        rs512326        C       G       .       PASS    AA=G;DP=80      GT:GQ:DP        1|1:38:11       1|1:53:16       1|1:100:50
+X      96164943        rs760871        C       T       .       PASS    AA=T;DP=88      GT:GQ:DP        1|1:38:11       1|1:54:23       1|1:100:21
+X      45118923        rs1304961       T       A       .       PASS    AA=N;DP=78      GT:GQ:DP        1|1:38:11       1|1:56:17       1|1:100:27
+13     60671454        rs3102206       C       T       .       PASS    AA=C;DP=70      GT:GQ:DP        1|1:38:11       1|1:59:18       1|1:100:41
+4      131391525       rs7692043       G       T       .       PASS    AA=T;DP=76      GT:GQ:DP        1|1:38:11       1|1:59:18       1|1:100:45
+2      154613792       rs1882323       A       G       .       PASS    AA=G;DP=76      GT:GQ:DP        1|1:38:11       1|1:62:19       1|1:100:46
+X      133653045       rs5930657       C       T       .       PASS    AA=T;DP=107     GT:GQ:DP        1|1:38:11       1|1:65:22       1|1:100:34
+X      30940888        rs5972307       G       A       .       PASS    AA=A;DP=82      GT:GQ:DP        1|1:38:11       1|1:65:24       1|1:100:38
+1      74512206        rs579070        A       G       .       PASS    AA=G;DP=79      GT:GQ:DP        1|1:38:11       1|1:68:21       1|1:100:35
+8      122309975       rs1504654       T       C       .       PASS    AA=T;DP=83      GT:GQ:DP        1|1:38:11       1|1:68:21       1|1:100:45
+X      34991308        rs3109873       T       C       .       PASS    AA=C;DP=89      GT:GQ:DP        1|1:38:11       1|1:68:25       1|1:100:23
+X      47347852        rs6608734       G       C       .       PASS    AA=C;DP=70      GT:GQ:DP        1|1:38:11       1|1:71:23       1|1:95:20
+X      125615375       rs1937541       C       T       .       PASS    AA=c;DP=76      GT:GQ:DP        1|1:38:11       1|1:74:23       1|1:100:23
+9      25619781        rs4570259       A       T       .       PASS    AA=T;DP=75      GT:GQ:DP        1|1:38:11       1|1:80:25       1|1:100:26
+X      36537761        rs12009136      T       C       .       PASS    AA=C;DP=111     GT:GQ:DP        1|1:38:11       1|1:89:29       1|1:100:38
+3      50922297        rs2355709       C       T       .       PASS    AA=T;DP=128     GT:GQ:DP        1|1:38:11       1|1:89:30       1|1:100:86
+12     34061366        rs1687003       T       A       .       PASS    AA=T;DP=66      GT:GQ:DP        1|1:38:12       1|1:30:15       1|1:94:28
+X      129111467       rs3213522       A       G       .       PASS    AA=G;DP=79      GT:GQ:DP        1|1:38:12       1|1:43:24       1|1:100:27
+12     21031958        rs6487197       T       C       .       PASS    AA=C;DP=62      GT:GQ:DP        1|1:38:12       1|1:47:14       1|1:100:25
+2      223998384       rs1921638       C       G       .       PASS    AA=N;DP=69      GT:GQ:DP        1|1:38:12       1|1:53:16       1|1:100:31
+3      87407214        rs300981        C       T       .       PASS    AA=T;DP=71      GT:GQ:DP        1|1:38:12       1|1:65:21       1|1:100:36
+X      142541256       rs5908730       G       A       .       PASS    AA=A;DP=84      GT:GQ:DP        1|1:38:12       1|1:71:22       1|1:100:28
+X      88212735        rs5942376       G       A       .       PASS    AA=N;DP=103     GT:GQ:DP        1|1:38:12       1|1:83:26       1|1:100:38
+12     75477030        rs4761429       G       A       .       PASS    AA=G;DP=79      GT:GQ:DP        1|1:38:13       1|1:56:17       1|1:100:39
+X      96002757        rs233206        G       A       .       PASS    AA=A;DP=81      GT:GQ:DP        1|1:38:14       1|1:59:19       1|1:62:19
+16     57756024        rs4785023       A       T       .       PASS    AA=A;DP=83      GT:GQ:DP        1|1:38:16       1|1:62:19       1|1:100:48
+11     92915508        rs2399675       A       C       .       PASS    AA=N;DP=49      GT:GQ:DP        1|1:38:17       1|1:23:7        1|1:56:22
+3      1054149 rs4422285       T       C       .       PASS    AA=C;DP=90      GT:GQ:DP        1|1:38:17       1|1:59:18       1|1:100:56
+7      104654566       rs9640686       T       G       .       PASS    AA=G;DP=99      GT:GQ:DP        1|1:38:17       1|1:74:26       1|1:100:57
+X      58351449        .       C       T       .       PASS    AA=.;DP=112     GT:GQ:DP        1|1:38:18       0|1:46:33       1|0:100:28
+1      186802918       rs4651462       C       G       .       PASS    AA=G;DP=84;HM2  GT:GQ:DP        1|1:38:18       1|1:53:16       1|1:100:50
+13     60576350        rs1399315       C       G       .       PASS    AA=c;DP=114     GT:GQ:DP        1|1:38:19       0|0:63:22       1|0:100:60
+14     38437595        rs4399455       A       G       .       PASS    AA=G;DP=111     GT:GQ:DP        1|1:38:19       0|1:100:24      1|0:100:66
+2      1875250 rs4564802       C       T       .       PASS    AA=T;DP=94      GT:GQ:DP        1|1:38:19       0|1:66:12       1|0:100:66
+17     21222218        rs7220315       T       G       .       PASS    AA=G;DP=74      GT:GQ:DP        1|1:38:19       1|1:15:8        1|1:75:43
+3      59542539        rs2168449       G       A       .       PASS    AA=A;DP=74      GT:GQ:DP        1|1:38:19       1|1:50:15       1|1:100:30
+14     58009899        rs1743712       C       T       .       PASS    AA=T;DP=73      GT:GQ:DP        1|1:38:19       1|1:62:20       1|1:100:25
+10     9013506 rs1243405       T       C       .       PASS    AA=T;DP=78      GT:GQ:DP        1|1:38:19       1|1:68:22       1|1:100:29
+4      100258572       rs2851256       G       A       .       PASS    AA=A;DP=100     GT:GQ:DP        1|1:38:19       1|1:86:27       1|1:100:54
+21     40919153        rs17000133      C       T       .       PASS    AA=C;DP=125     GT:GQ:DP        1|1:38:20       0|0:78:26       1|0:100:37
+9      131200182       rs10819512      C       A       .       PASS    AA=.;DP=87      GT:GQ:DP        1|1:38:20       0|1:79:11       1|0:100:54
+10     3154194 rs7913100       C       T       .       PASS    AA=T;DP=82      GT:GQ:DP        1|1:38:20       1|1:13:12       1|1:100:41
+18     35153966        rs9304205       T       G       .       PASS    AA=G;DP=90      GT:GQ:DP        1|1:38:21       1|1:17:18       1|1:95:51
+4      125708293       rs4833304       T       G       .       PASS    AA=C;DP=101     GT:GQ:DP        1|1:38:21       1|1:30:24       1|1:100:28
+16     9039991 rs4985089       T       A       .       PASS    AA=-;DP=90      GT:GQ:DP        1|1:38:22       0|1:4:10        1|0:4:58
+1      57938307        rs9436147       C       T       .       PASS    AA=T;DP=87;HM2  GT:GQ:DP        1|1:38:22       1|0:100:18      1|1:76:35
+4      43076190        rs499165        A       T       .       PASS    AA=T;DP=114     GT:GQ:DP        1|1:38:22       1|1:100:36      1|1:100:59
+3      21938989        rs1684476       C       T       .       PASS    AA=T;DP=122     GT:GQ:DP        1|1:38:22       1|1:33:24       1|1:100:75
+5      146197500       rs161023        T       G       .       PASS    AA=G;DP=106     GT:GQ:DP        1|1:38:22       1|1:38:20       1|1:100:54
+8      113556143       rs7819392       A       G       .       PASS    AA=G;DP=86      GT:GQ:DP        1|1:38:22       1|1:44:13       1|1:100:49
+8      123008914       rs4871215       T       G       .       PASS    AA=G;DP=92      GT:GQ:DP        1|1:38:22       1|1:59:18       1|1:100:53
+22     26999155        rs2223370       T       C       .       PASS    AA=C;DP=96      GT:GQ:DP        1|1:38:22       1|1:62:19       1|1:100:55
+7      157404111       rs10248782      C       T       .       PASS    AA=T;DP=115     GT:GQ:DP        1|1:38:22       1|1:65:21       1|1:100:58
+6      18803170        rs6912809       T       C       .       PASS    AA=T;DP=110     GT:GQ:DP        1|1:38:22       1|1:71:23       1|1:100:63
+2      3815002 rs10865001      A       G       .       PASS    AA=G;DP=115     GT:GQ:DP        1|1:38:22       1|1:74:27       1|1:100:65
+8      49291025        rs6474093       A       C       .       PASS    AA=C;DP=107     GT:GQ:DP        1|1:38:22       1|1:86:27       1|1:100:62
+16     25893029        rs9930733       T       C       .       PASS    AA=C;DP=125     GT:GQ:DP        1|1:38:22       1|1:86:27       1|1:100:75
+3      66824564        rs1993446       C       T       .       PASS    AA=c;DP=120     GT:GQ:DP        1|1:38:22       1|1:86:28       1|1:100:71
+8      134703780       rs3864662       T       C       .       PASS    AA=T;DP=124     GT:GQ:DP        1|1:38:22       1|1:89:30       1|1:100:66
+4      103187105       rs2850395       C       T       .       PASS    AA=T;DP=122     GT:GQ:DP        1|1:38:22       1|1:95:30       1|1:100:70
+5      33467110        rs1542031       C       T       .       PASS    AA=T;DP=128     GT:GQ:DP        1|1:38:22       1|1:95:30       1|1:100:76
+6      140225482       rs7746560       A       C       .       PASS    AA=C;DP=126     GT:GQ:DP        1|1:38:22       1|1:98:31       1|1:100:74
+19     36617971        rs59820946      C       T       .       PASS    AA=C;DP=139     GT:GQ:DP        1|1:38:23       0|1:100:28      1|0:100:46
+19     1757210 rs7252063       A       C       .       PASS    AA=C;DP=77      GT:GQ:DP        1|1:38:23       1|1:11:6        1|1:100:44
+21     19173320        rs7282574       T       C       .       PASS    AA=T;DP=82      GT:GQ:DP        1|1:38:23       1|1:47:14       1|1:100:45
+16     2078870 rs13332377      C       T       .       PASS    AA=-;DP=113     GT:GQ:DP        1|1:38:24       0|0:5:18        1|0:100:64
+12     71932303        rs1850158       G       T       .       PASS    AA=T;DP=95      GT:GQ:DP        1|1:38:24       1|0:100:18      1|1:100:45
+3      65583776        rs7431819       A       G       .       PASS    AA=A;DP=91      GT:GQ:DP        1|1:38:24       1|0:88:20       1|1:58:40
+6      119496713       rs1068680       A       G       .       PASS    AA=G;DP=114     GT:GQ:DP        1|1:38:24       1|1:38:18       1|1:100:68
+18     37746914        rs9954424       C       T       .       PASS    AA=C;DP=97      GT:GQ:DP        1|1:38:25       0|0:51:17       1|0:100:53
+4      101754195       rs13115649      T       C       .       PASS    AA=C;DP=117     GT:GQ:DP        1|1:38:25       0|1:100:20      1|0:100:72
+13     69790129        rs9542275       G       T       .       PASS    AA=G;DP=135     GT:GQ:DP        1|1:38:25       0|1:100:33      1|0:100:76
+14     24344766        rs12896662      T       G       .       PASS    AA=G;DP=154     GT:GQ:DP        1|1:38:25       0|1:100:36      1|0:100:51
+5      41074480        rs325848        G       T       .       PASS    AA=g;DP=98      GT:GQ:DP        1|1:38:25       0|1:42:23       1|0:100:52
+8      97440862        rs13254991      T       C       .       PASS    AA=C;DP=96      GT:GQ:DP        1|1:38:25       0|1:62:15       1|0:100:58
+9      77503759        rs1328554       C       A       .       PASS    AA=A;DP=114     GT:GQ:DP        1|1:38:25       0|1:78:25       1|0:100:65
+12     15699063        rs7300255       T       C       .       PASS    AA=C;DP=79      GT:GQ:DP        1|1:38:25       0|1:98:21       1|0:100:32
+11     69609991        rs2509129       T       A       .       PASS    AA=A;DP=135     GT:GQ:DP        1|1:38:26       1|1:35:17       1|1:100:51
+12     9368555 rs12581556      G       A       .       PASS    AA=-;DP=120     GT:GQ:DP        1|1:38:28       1|0:33:16       1|1:100:78
+12     115414866       rs11837428      A       G       .       PASS    AA=G;DP=125     GT:GQ:DP        1|1:38:30       0|0:57:19       1|0:100:75
+6      11274596        rs4406221       A       G       .       PASS    AA=G;DP=108     GT:GQ:DP        1|1:38:30       1|1:29:19       1|1:88:57
+X      144980991       rs4827608       T       C       .       PASS    AA=C;DP=77      GT:GQ:DP        1|1:39:13       1|0:100:13      1|1:81:27
+X      69332592        rs1199514       T       C       .       PASS    AA=t;DP=80      GT:GQ:DP        1|1:39:13       1|0:100:15      1|1:68:29
+8      60714209        rs4342576       A       T       .       PASS    AA=T;DP=61      GT:GQ:DP        1|1:39:13       1|0:100:17      1|1:65:30
+X      137164588       rs5931359       T       C       .       PASS    AA=C;DP=82      GT:GQ:DP        1|1:39:13       1|0:100:18      1|1:99:33
+X      54109595        rs2495792       T       C       .       PASS    AA=T;DP=99      GT:GQ:DP        1|1:39:13       1|0:100:22      1|1:100:37
+X      47114853        rs3810666       G       A       .       PASS    AA=.;DP=105     GT:GQ:DP        1|1:39:13       1|0:100:22      1|1:100:38
+X      93922941        rs6619631       A       G       .       PASS    AA=.;DP=87      GT:GQ:DP        1|1:39:13       1|0:100:23      1|1:78:26
+X      98563543        rs2474419       T       C       .       PASS    AA=C;DP=104     GT:GQ:DP        1|1:39:13       1|0:100:24      1|1:100:41
+X      151849797       rs743637        A       G       .       PASS    AA=G;DP=115     GT:GQ:DP        1|1:39:13       1|0:18:17       1|1:100:53
+18     73662055        rs28413703      C       G       .       PASS    AA=C;DP=57      GT:GQ:DP        1|1:39:13       1|0:40:8        1|1:56:30
+12     87279708        rs10858715      G       T       .       PASS    AA=T;DP=77      GT:GQ:DP        1|1:39:13       1|0:53:23       1|1:87:30
+X      145153297       rs6418469       C       T       .       PASS    AA=C;DP=87      GT:GQ:DP        1|1:39:13       1|0:62:18       1|1:90:31
+X      22471068        rs5971105       A       T       .       PASS    AA=T;DP=101     GT:GQ:DP        1|1:39:13       1|0:78:24       1|1:100:36
+8      14196878        rs12675591      A       G       .       PASS    AA=G;DP=81      GT:GQ:DP        1|1:39:13       1|0:92:20       1|1:66:22
+7      80713321        rs6467649       T       A       .       PASS    AA=A;DP=77      GT:GQ:DP        1|1:39:13       1|0:93:18       1|1:100:47
+X      29110020        rs6630822       A       G       .       PASS    AA=G;DP=116     GT:GQ:DP        1|1:39:13       1|0:93:25       1|1:78:26
+X      31931740        rs1293910       T       C       .       PASS    AA=T;DP=75      GT:GQ:DP        1|1:39:13       1|0:97:20       1|1:54:19
+X      33727149        rs2446942       T       G       .       PASS    AA=T;DP=89      GT:GQ:DP        1|1:39:13       1|0:97:30       1|1:78:26
+3      161504375       rs4680576       G       A       .       PASS    AA=A;DP=72      GT:GQ:DP        1|1:39:14       0|1:100:11      1|0:100:47
+11     89683056        rs1995706       C       T       .       PASS    AA=T;DP=80      GT:GQ:DP        1|1:39:14       0|1:100:16      1|0:100:48
+12     81869993        rs2403021       C       G       .       PASS    AA=C;DP=100     GT:GQ:DP        1|1:39:14       0|1:100:18      1|0:100:27
+1      86207019        rs559247        C       T       .       PASS    AA=T;DP=105;HM2;HM3     GT:GQ:DP        1|1:39:14       0|1:100:18      1|0:100:59
+1      195046430       rs378652        T       C       .       PASS    AA=N;DP=79      GT:GQ:DP        1|1:39:14       0|1:100:19      1|0:100:47
+X      57937585        .       C       A       .       PASS    AA=.;DP=105     GT:GQ:DP        1|1:39:14       0|1:100:25      1|0:100:34
+X      22124905        rs57043277      G       C       .       PASS    AA=C;DP=100     GT:GQ:DP        1|1:39:14       0|1:15:19       1|0:100:37
+7      157686364       rs6963290       T       C       .       PASS    AA=T;DP=60      GT:GQ:DP        1|1:39:14       0|1:22:16       1|0:100:20
+8      18848298        rs11786290      A       G       .       PASS    AA=G;DP=79      GT:GQ:DP        1|1:39:14       0|1:27:15       1|0:100:51
+21     45721508        rs2236460       C       T       .       PASS    AA=T;DP=85      GT:GQ:DP        1|1:39:14       0|1:40:8        1|0:100:65
+17     50866820        rs11869291      C       T       .       PASS    AA=T;DP=91      GT:GQ:DP        1|1:39:14       0|1:49:19       1|0:100:58
+X      22894627        rs4074766       T       C       .       PASS    AA=T;DP=101     GT:GQ:DP        1|1:39:14       0|1:58:24       1|0:100:34
+13     53512353        rs11617903      A       G       .       PASS    AA=a;DP=80      GT:GQ:DP        1|1:39:14       0|1:61:20       1|0:100:45
+4      57997415        rs1470156       C       T       .       PASS    AA=C;DP=101     GT:GQ:DP        1|1:39:14       0|1:77:23       1|0:100:65
+13     57381420        rs3861168       C       T       .       PASS    AA=T;DP=62      GT:GQ:DP        1|1:39:14       0|1:78:10       1|0:100:27
+8      87100055        rs13271647      C       A       .       PASS    AA=C;DP=83      GT:GQ:DP        1|1:39:14       0|1:92:20       1|0:100:50
+12     58145403        rs275991        A       G       .       PASS    AA=G;DP=83      GT:GQ:DP        1|1:39:14       0|1:93:16       1|0:100:53
+1      194100797       rs10801482      T       A       .       PASS    AA=T;DP=81;HM2  GT:GQ:DP        1|1:39:14       0|1:93:23       1|0:100:44
+X      20594915        rs5990919       A       C       .       PASS    AA=C;DP=87      GT:GQ:DP        1|1:39:14       0|1:97:20       1|0:100:33
+14     36180672        rs1033591       G       C       .       PASS    AA=G;DP=85      GT:GQ:DP        1|1:39:14       1|0:100:16      1|1:100:54
+X      13129488        rs4830489       A       G       .       PASS    AA=G;DP=90      GT:GQ:DP        1|1:39:14       1|0:100:26      1|1:100:36
+X      122519849       rs2851731       A       T       .       PASS    AA=T;DP=98      GT:GQ:DP        1|1:39:14       1|0:52:33       1|1:100:35
+X      39254085        rs4827016       T       C       .       PASS    AA=C;DP=112     GT:GQ:DP        1|1:39:14       1|0:76:24       1|1:100:53
+13     83404198        rs17077502      A       G       .       PASS    AA=A;DP=86      GT:GQ:DP        1|1:39:14       1|0:97:24       1|1:100:37
+X      45411506        rs5906047       C       A       .       PASS    AA=A;DP=102     GT:GQ:DP        1|1:39:15       0|1:100:20      1|0:100:30
+X      141895881       rs61628073      A       G       .       PASS    AA=A;DP=92      GT:GQ:DP        1|1:39:15       0|1:100:27      1|0:100:25
+X      97506168        .       C       T       .       PASS    AA=C;DP=96      GT:GQ:DP        1|1:39:15       0|1:37:21       1|0:100:31
+6      107830267       rs685971        G       T       .       PASS    AA=T;DP=89      GT:GQ:DP        1|1:39:15       0|1:71:12       1|0:87:20
+12     73276981        rs2605363       G       A       .       PASS    AA=a;DP=69      GT:GQ:DP        1|1:39:15       0|1:81:18       1|0:100:25
+9      105373986       rs2786790       C       G       .       PASS    AA=G;DP=79      GT:GQ:DP        1|1:39:15       1|0:100:19      1|1:93:31
+8      111355291       rs3019325       C       G       .       PASS    AA=G;DP=74      GT:GQ:DP        1|1:39:15       1|1:65:21       1|1:100:38
+18     57229126        rs7234428       A       T       .       PASS    AA=T;DP=68      GT:GQ:DP        1|1:39:16       1|1:18:12       1|1:82:29
+11     81483716        rs675307        C       T       .       PASS    AA=T;DP=75      GT:GQ:DP        1|1:39:17       1|1:21:14       1|1:100:42
+5      146575143       rs31023 G       T       .       PASS    AA=T;DP=67      GT:GQ:DP        1|1:39:17       1|1:38:11       1|1:78:37
+6      51205673        rs2505265       A       G       .       PASS    AA=G;DP=99      GT:GQ:DP        1|1:39:17       1|1:47:16       1|1:72:63
+5      167404091       rs17069705      T       G       .       PASS    AA=T;DP=95      GT:GQ:DP        1|1:39:17       1|1:74:23       1|1:100:56
+17     35289174        rs9910826       A       G       .       PASS    AA=A;DP=77      GT:GQ:DP        1|1:39:18       0|1:100:22      1|0:13:36
+15     21861613        .       A       G       .       PASS    AA=.;DP=100     GT:GQ:DP        1|1:39:19       0|1:100:31      1|0:100:51
+11     81139561        rs7131066       T       C       .       PASS    AA=C;DP=105     GT:GQ:DP        1|1:39:19       1|1:47:26       1|1:100:60
+3      151858440       rs11923753      G       A       .       PASS    AA=g;DP=89      GT:GQ:DP        1|1:39:20       0|1:100:21      1|0:100:37
+2      35138774        rs1734020       A       G       .       PASS    AA=G;DP=83      GT:GQ:DP        1|1:39:20       0|1:67:17       1|0:100:47
+10     134126752       rs7898918       G       A       .       PASS    AA=G;DP=77      GT:GQ:DP        1|1:39:20       0|1:85:14       1|0:100:36
+3      170046547       rs9843139       G       T       .       PASS    AA=-;DP=114     GT:GQ:DP        1|1:39:21       1|1:62:19       1|1:100:73
+13     107553097       rs1223960       C       A       .       PASS    AA=C;DP=124     GT:GQ:DP        1|1:39:22       0|0:78:26       1|0:100:76
+16     84424995        rs11643289      A       G       .       PASS    AA=G;DP=79      GT:GQ:DP        1|1:39:22       0|1:43:10       1|0:100:46
+5      21267545        rs4030557       C       A       .       PASS    AA=A;DP=84      GT:GQ:DP        1|1:39:22       1|0:77:17       1|1:100:44
+3      121694290       rs8180108       C       G       .       PASS    AA=C;DP=109     GT:GQ:DP        1|1:39:22       1|1:41:23       1|1:100:59
+5      146621808       rs6890102       T       C       .       PASS    AA=C;DP=120     GT:GQ:DP        1|1:39:22       1|1:68:23       1|1:100:71
+3      60646358        rs1716734       C       T       .       PASS    AA=C;DP=111     GT:GQ:DP        1|1:39:22       1|1:89:28       1|1:100:50
+13     90753563        rs7995715       T       G       .       PASS    AA=A;DP=127     GT:GQ:DP        1|1:39:24       0|0:66:22       1|0:100:80
+1      227651040       rs10799531      A       G       .       PASS    AA=A;DP=100;HM3 GT:GQ:DP        1|1:39:24       0|1:92:14       1|0:100:63
+4      17092780        rs13138275      A       G       .       PASS    AA=A;DP=135     GT:GQ:DP        1|1:39:25       0|0:78:27       1|0:100:85
+19     20023962        rs6511075       G       A       .       PASS    AA=.;DP=80      GT:GQ:DP        1|1:39:25       1|1:26:8        1|1:100:44
+15     24603417        rs6576625       C       A       .       PASS    AA=A;DP=122     GT:GQ:DP        1|1:39:26       0|0:33:22       1|0:100:37
+17     77098594        rs7342974       T       C       .       PASS    AA=C;DP=136     GT:GQ:DP        1|1:39:26       0|0:37:21       1|0:100:42
+6      104626821       rs11156357      G       A       .       PASS    AA=A;DP=100     GT:GQ:DP        1|1:39:26       0|0:41:20       1|0:100:56
+14     100858094       rs34703102      G       A       .       PASS    AA=G;DP=96      GT:GQ:DP        1|1:39:26       0|0:42:15       1|0:100:55
+7      85220179        rs28793652      G       A       .       PASS    AA=G;DP=104     GT:GQ:DP        1|1:39:26       0|0:57:20       1|0:100:56
+6      123044547       rs2195686       A       C       .       PASS    AA=A;DP=95      GT:GQ:DP        1|1:39:26       0|0:69:23       1|0:100:46
+6      32770106        .       A       G       .       PASS    AA=a;DP=104     GT:GQ:DP        1|1:39:26       0|0:69:24       1|0:100:43
+4      95553704        rs56020558      A       T       .       PASS    AA=A;DP=88      GT:GQ:DP        1|1:39:26       0|0:84:29       1|0:100:26
+10     54618527        rs1903965       T       C       .       PASS    AA=T;DP=137     GT:GQ:DP        1|1:39:26       0|0:96:32       1|0:100:80
+10     83627175        rs6584385       G       C       .       PASS    AA=G;DP=116     GT:GQ:DP        1|1:39:27       0|0:60:20       1|0:100:69
+17     68433326        rs8067883       C       T       .       PASS    AA=T;DP=123     GT:GQ:DP        1|1:39:29       0|1:100:26      1|0:100:71
+5      102348004       rs2400897       A       C       .       PASS    AA=A;DP=108     GT:GQ:DP        1|1:39:30       0|0:45:20       1|0:100:56
+5      101559941       rs12187781      C       G       .       PASS    AA=C;DP=115     GT:GQ:DP        1|1:39:30       0|0:60:22       1|0:100:61
+5      173556441       rs12657664      G       A       .       PASS    AA=g;DP=122     GT:GQ:DP        1|1:39:30       0|0:69:24       1|0:100:67
+18     13892239        rs9954611       G       C       .       PASS    AA=G;DP=117     GT:GQ:DP        1|1:39:30       1|0:100:26      1|1:100:61
+4      125146781       rs4280747       T       C       .       PASS    AA=C;DP=140     GT:GQ:DP        1|1:39:32       1|0:100:28      1|1:100:81
+X      21530233        .       G       A       .       PASS    AA=A;DP=79      GT:GQ:DP        1|1:3:12        0|0:67:22       1|0:100:31
+X      116493101       rs5956698       C       T       .       PASS    AA=T;DP=87      GT:GQ:DP        1|1:3:12        0|0:67:22       1|0:100:32
+13     85753965        .       A       C       .       PASS    AA=C;DP=79      GT:GQ:DP        1|1:3:13        1|0:100:18      1|1:100:49
+X      113966634       .       A       G       .       PASS    AA=A;DP=68      GT:GQ:DP        1|1:3:8 0|0:49:16       1|0:100:23
+X      128458788       rs16999468      T       C       .       PASS    AA=t;DP=109     GT:GQ:DP        1|1:3:8 0|0:94:31       1|0:100:41
+X      33040512        .       C       T       .       PASS    AA=T;DP=81      GT:GQ:DP        1|1:3:9 0|0:58:19       1|0:76:13
+4      64419654        rs17637474      G       A       .       PASS    AA=A;DP=70      GT:GQ:DP        1|1:40:15       0|0:21:7        1|0:100:45
+11     104060049       rs10791724      T       G       .       PASS    AA=T;DP=74      GT:GQ:DP        1|1:40:15       0|0:22:18       1|0:100:19
+3      74392334        rs471800        C       T       .       PASS    AA=T;DP=57      GT:GQ:DP        1|1:40:15       0|0:27:9        1|0:100:23
+13     109285491       rs1335611       G       C       .       PASS    AA=C;DP=71      GT:GQ:DP        1|1:40:15       0|0:30:11       1|0:100:38
+11     80307138        rs959634        A       G       .       PASS    AA=A;DP=68      GT:GQ:DP        1|1:40:15       0|0:33:12       1|0:100:26
+X      75601748        rs5938554       G       C       .       PASS    AA=.;DP=89      GT:GQ:DP        1|1:40:15       0|0:39:13       1|0:100:30
+19     5100033 rs2620831       C       T       .       PASS    AA=C;DP=96      GT:GQ:DP        1|1:40:15       0|0:45:15       1|0:100:65
+1      193272211       rs10921734      A       T       .       PASS    AA=T;DP=106;HM2 GT:GQ:DP        1|1:40:15       0|0:45:15       1|0:100:67
+X      117613655       rs6646243       C       T       .       PASS    AA=T;DP=92      GT:GQ:DP        1|1:40:15       0|0:51:17       1|0:100:38
+5      53702502        rs10428583      G       C       .       PASS    AA=G;DP=83      GT:GQ:DP        1|1:40:15       0|0:51:17       1|0:100:53
+5      64109622        rs6895768       A       G       .       PASS    AA=G;DP=85      GT:GQ:DP        1|1:40:15       0|0:51:17       1|0:100:55
+2      12342764        rs10193930      T       G       .       PASS    AA=G;DP=62      GT:GQ:DP        1|1:40:15       0|0:51:18       1|0:100:21
+X      118306409       .       G       A       .       PASS    AA=G;DP=84      GT:GQ:DP        1|1:40:15       0|0:60:20       1|0:100:25
+X      34473737        rs6632017       A       G       .       PASS    AA=G;DP=113     GT:GQ:DP        1|1:40:15       0|0:66:22       1|0:100:38
+8      13529461        .       G       A       .       PASS    AA=A;DP=110     GT:GQ:DP        1|1:40:15       0|0:69:23       1|0:100:33
+X      4464461 .       G       A       .       PASS    AA=G;DP=139     GT:GQ:DP        1|1:40:15       0|0:70:34       1|0:100:43
+3      145814459       rs61071491      T       A       .       PASS    AA=T;DP=100     GT:GQ:DP        1|1:40:15       0|0:72:24       1|0:100:57
+X      10871233        .       A       G       .       PASS    AA=A;DP=104     GT:GQ:DP        1|1:40:15       0|0:72:26       1|0:100:32
+4      75640824        rs9996584       G       A       .       PASS    AA=.;DP=111     GT:GQ:DP        1|1:40:15       0|0:75:25       1|0:100:69
+4      107075172       rs7669108       G       T       .       PASS    AA=G;DP=102     GT:GQ:DP        1|1:40:15       0|0:77:32       1|0:100:55
+X      140694049       rs6636474       A       G       .       PASS    AA=A;DP=98      GT:GQ:DP        1|1:40:15       0|0:90:31       1|0:100:33
+11     78854925        rs12801393      A       G       .       PASS    AA=A;DP=83      GT:GQ:DP        1|1:40:16       0|0:51:17       1|0:100:50
+11     25373452        rs10767378      A       G       .       PASS    AA=A;DP=73      GT:GQ:DP        1|1:40:16       0|0:51:18       1|0:100:32
+14     85259423        rs61992775      G       C       .       PASS    AA=C;DP=73      GT:GQ:DP        1|1:40:16       0|0:54:18       1|0:100:30
+X      15202943        rs62580240      A       G       .       PASS    AA=A;DP=105     GT:GQ:DP        1|1:40:16       0|0:75:25       1|0:100:38
+4      162093042       rs9308018       C       T       .       PASS    AA=C;DP=92      GT:GQ:DP        1|1:40:16       0|0:75:25       1|0:100:49
+X      8518877 .       G       A       .       PASS    AA=G;DP=123     GT:GQ:DP        1|1:40:16       0|0:81:28       1|0:100:28
+8      39236085        .       A       G       .       PASS    AA=a;DP=92      GT:GQ:DP        1|1:40:16       0|0:87:29       1|0:100:35
+8      35716007        rs16884360      A       G       .       PASS    AA=A;DP=102     GT:GQ:DP        1|1:40:17       0|0:54:19       1|0:100:68
+15     52844476        rs2695659       G       C       .       PASS    AA=G;DP=99      GT:GQ:DP        1|1:40:17       0|0:60:20       1|0:100:65
+3      25498556        rs1286655       C       A       .       PASS    AA=A;DP=105     GT:GQ:DP        1|1:40:17       1|1:49:21       1|1:100:66
+8      93221224        rs6992101       C       A       .       PASS    AA=G;DP=82      GT:GQ:DP        1|1:40:18       1|1:49:20       1|1:97:45
+2      24965184        rs10172886      T       C       .       PASS    AA=C;DP=85      GT:GQ:DP        1|1:40:19       1|1:8:12        1|1:100:54
+8      39346320        rs28412969      C       A       .       PASS    AA=A;DP=88      GT:GQ:DP        1|1:40:20       0|1:91:18       1|0:100:49
+11     104540086       rs11226642      C       T       .       PASS    AA=t;DP=92      GT:GQ:DP        1|1:40:20       1|0:100:26      1|1:100:46
+10     175876  rs4537685       G       T       .       PASS    AA=T;DP=90      GT:GQ:DP        1|1:40:20       1|1:33:15       1|1:100:44
+1      93034246        rs9439924       C       T       .       PASS    AA=T;DP=73      GT:GQ:DP        1|1:40:20       1|1:41:12       1|1:100:41
+4      2529788 rs1728273       C       T       .       PASS    AA=T;DP=102     GT:GQ:DP        1|1:40:20       1|1:41:18       1|1:100:66
+4      27700837        rs10028803      T       A       .       PASS    AA=A;DP=90      GT:GQ:DP        1|1:40:20       1|1:62:21       1|1:100:48
+X      135894201       .       T       G       .       PASS    AA=t;DP=130     GT:GQ:DP        1|1:40:21       0|0:81:27       1|0:100:45
+10     56528344        rs2264765       A       G       .       PASS    AA=G;DP=106     GT:GQ:DP        1|1:40:21       0|1:55:19       1|0:100:66
+7      89144100        rs7803868       C       G       .       PASS    AA=G;DP=92      GT:GQ:DP        1|1:40:22       0|0:41:23       1|0:100:37
+2      3296717 rs11127406      C       T       .       PASS    AA=T;DP=71      GT:GQ:DP        1|1:40:23       1|0:65:9        1|1:100:37
+9      137268849       rs4842231       A       C       .       PASS    AA=C;DP=140     GT:GQ:DP        1|1:40:24       0|1:100:31      1|0:100:85
+2      125178790       rs7608753       G       A       .       PASS    AA=N;DP=90      GT:GQ:DP        1|1:40:24       0|1:48:14       1|0:100:50
+4      72589265        rs6840114       T       C       .       PASS    AA=T;DP=100     GT:GQ:DP        1|1:40:24       1|0:97:22       1|1:21:54
+4      174706682       rs4695847       T       C       .       PASS    AA=C;DP=125     GT:GQ:DP        1|1:40:25       0|1:100:26      1|0:100:74
+8      15662889        rs352807        G       A       .       PASS    AA=A;DP=88      GT:GQ:DP        1|1:40:25       1|1:61:26       1|1:100:31
+8      107406064       rs9774587       C       A       .       PASS    AA=C;DP=103     GT:GQ:DP        1|1:40:27       0|1:100:16      1|0:100:60
+8      22873338        rs2430792       T       C       .       PASS    AA=C;DP=99      GT:GQ:DP        1|1:40:27       1|1:29:19       1|1:100:41
+16     70713258        rs217173        G       C       .       PASS    AA=C;DP=104     GT:GQ:DP        1|1:40:27       1|1:56:18       1|1:100:59
+3      15983711        rs1454773       T       C       .       PASS    AA=C;DP=123     GT:GQ:DP        1|1:40:29       1|1:44:20       1|1:100:77
+20     52616118        rs6098092       T       G       .       PASS    AA=G;DP=99      GT:GQ:DP        1|1:40:30       0|0:42:14       1|0:100:54
+9      98941038        rs7033860       T       G       .       PASS    AA=N;DP=73      GT:GQ:DP        1|1:41:12       1|1:21:16       1|1:100:45
+X      95649497        rs10127039      C       T       .       PASS    AA=T;DP=74      GT:GQ:DP        1|1:41:12       1|1:27:18       1|1:99:32
+12     85519831        rs10745429      C       T       .       PASS    AA=c;DP=93      GT:GQ:DP        1|1:41:12       1|1:31:14       1|1:100:67
+4      172395819       rs7660351       T       C       .       PASS    AA=T;DP=107     GT:GQ:DP        1|1:41:12       1|1:33:23       1|1:100:73
+X      126503996       rs5974918       T       A       .       PASS    AA=t;DP=60      GT:GQ:DP        1|1:41:12       1|1:35:10       1|1:91:19
+X      132262710       rs5975390       C       A       .       PASS    AA=-;DP=62      GT:GQ:DP        1|1:41:12       1|1:36:16       1|1:71:23
+4      172373746       rs1038818       G       A       .       PASS    AA=G;DP=81      GT:GQ:DP        1|1:41:12       1|1:36:19       1|1:100:35
+4      177373506       rs922849        G       A       .       PASS    AA=A;DP=55      GT:GQ:DP        1|1:41:12       1|1:38:11       1|1:100:22
+1      58928271        rs2223698       T       C       .       PASS    AA=t;DP=64;HM2;HM3      GT:GQ:DP        1|1:41:12       1|1:41:12       1|1:100:42
+13     18267705        rs7339372       C       T       .       PASS    AA=N;DP=74      GT:GQ:DP        1|1:41:12       1|1:41:13       1|1:100:47
+2      124794574       rs779979        A       C       .       PASS    AA=C;DP=65      GT:GQ:DP        1|1:41:12       1|1:44:13       1|1:100:43
+X      126100419       rs1291959       T       C       .       PASS    AA=C;DP=87      GT:GQ:DP        1|1:41:12       1|1:44:14       1|1:75:19
+X      12285486        rs5935309       G       C       .       PASS    AA=C;DP=112     GT:GQ:DP        1|1:41:12       1|1:46:25       1|1:100:37
+4      60648774        rs11724081      A       C       .       PASS    AA=a;DP=66      GT:GQ:DP        1|1:41:12       1|1:47:14       1|1:100:31
+1      57001844        rs1102185       A       G       .       PASS    AA=G;DP=68      GT:GQ:DP        1|1:41:12       1|1:47:14       1|1:100:43
+16     62742531        rs994909        T       C       .       PASS    AA=C;DP=73      GT:GQ:DP        1|1:41:12       1|1:47:14       1|1:100:47
+X      127847346       rs1154885       C       G       .       PASS    AA=N;DP=93      GT:GQ:DP        1|1:41:12       1|1:47:16       1|1:100:28
+11     73721356        rs596976        G       A       .       PASS    AA=A;DP=94      GT:GQ:DP        1|1:41:12       1|1:47:20       1|1:100:64
+7      33702884        rs4723318       T       C       .       PASS    AA=C;DP=76      GT:GQ:DP        1|1:41:12       1|1:50:16       1|1:100:48
+X      81549904        rs5969485       G       A       .       PASS    AA=A;DP=94      GT:GQ:DP        1|1:41:12       1|1:53:18       1|1:100:31
+2      55666837        rs13009239      A       G       .       PASS    AA=A;DP=72      GT:GQ:DP        1|1:41:12       1|1:53:21       1|1:100:28
+X      6980004 rs5978831       G       C       .       PASS    AA=C;DP=84      GT:GQ:DP        1|1:41:12       1|1:54:22       1|1:100:40
+8      17204331        rs7007043       T       C       .       PASS    AA=T;DP=104     GT:GQ:DP        1|1:41:12       1|1:55:28       1|1:100:66
+8      114333282       rs2030505       G       A       .       PASS    AA=A;DP=62      GT:GQ:DP        1|1:41:12       1|1:56:17       1|1:100:23
+4      111057575       rs2298979       G       A       .       PASS    AA=A;DP=84      GT:GQ:DP        1|1:41:12       1|1:56:17       1|1:100:54
+X      145614175       rs410329        T       C       .       PASS    AA=C;DP=81      GT:GQ:DP        1|1:41:12       1|1:59:18       1|1:100:33
+11     23076798        rs2433572       A       T       .       PASS    AA=T;DP=64      GT:GQ:DP        1|1:41:12       1|1:62:19       1|1:100:25
+12     26089585        rs1390322       G       A       .       PASS    AA=A;DP=75      GT:GQ:DP        1|1:41:12       1|1:62:19       1|1:100:44
+X      4781622 rs1880897       G       C       .       PASS    AA=N;DP=103     GT:GQ:DP        1|1:41:12       1|1:65:20       1|1:100:41
+8      138720058       rs4270999       C       T       .       PASS    AA=C;DP=85      GT:GQ:DP        1|1:41:12       1|1:65:20       1|1:100:53
+8      32001604        rs1462905       T       G       .       PASS    AA=G;DP=110     GT:GQ:DP        1|1:41:12       1|1:65:20       1|1:100:76
+X      81008128        rs2507021       T       C       .       PASS    AA=C;DP=106     GT:GQ:DP        1|1:41:12       1|1:65:29       1|1:100:36
+7      118293833       rs2590656       C       A       .       PASS    AA=A;DP=70      GT:GQ:DP        1|1:41:12       1|1:68:21       1|1:100:37
+13     85516099        rs9319189       A       G       .       PASS    AA=G;DP=88      GT:GQ:DP        1|1:41:12       1|1:71:22       1|1:100:53
+X      108342467       rs5943287       G       A       .       PASS    AA=-;DP=96      GT:GQ:DP        1|1:41:12       1|1:71:23       1|1:100:34
+3      115755242       rs2942788       T       C       .       PASS    AA=C;DP=75      GT:GQ:DP        1|1:41:12       1|1:83:26       1|1:100:27
+X      51374304        rs5987447       A       G       .       PASS    AA=a;DP=114     GT:GQ:DP        1|1:41:12       1|1:89:29       1|1:100:45
+3      145773600       rs1178922       A       T       .       PASS    AA=T;DP=113     GT:GQ:DP        1|1:41:12       1|1:98:32       1|1:100:68
+4      32605595        rs28453059      G       A       .       PASS    AA=A;DP=64      GT:GQ:DP        1|1:41:13       1|1:26:12       1|1:100:40
+X      19890662        rs7883287       C       T       .       PASS    AA=T;DP=106     GT:GQ:DP        1|1:41:13       1|1:41:13       1|1:100:30
+4      175834176       rs4549357       T       C       .       PASS    AA=C;DP=100     GT:GQ:DP        1|1:41:13       1|1:50:15       1|1:100:70
+X      149847565       rs190212        T       C       .       PASS    AA=C;DP=120     GT:GQ:DP        1|1:41:13       1|1:50:16       1|1:100:54
+12     106755262       rs10778581      C       T       .       PASS    AA=T;DP=72      GT:GQ:DP        1|1:41:13       1|1:53:16       1|1:100:44
+3      1014037 rs4234580       G       A       .       PASS    AA=A;DP=72      GT:GQ:DP        1|1:41:13       1|1:56:17       1|1:100:31
+X      151324343       rs5970295       A       G       .       PASS    AA=G;DP=107     GT:GQ:DP        1|1:41:13       1|1:62:19       1|1:100:44
+X      87494966        rs6617566       T       C       .       PASS    AA=.;DP=101     GT:GQ:DP        1|1:41:13       1|1:62:21       1|1:100:33
+X      46209537        rs7876304       T       C       .       PASS    AA=T;DP=99      GT:GQ:DP        1|1:41:13       1|1:62:25       1|1:100:40
+X      139656261       rs1997941       C       T       .       PASS    AA=T;DP=88      GT:GQ:DP        1|1:41:13       1|1:77:24       1|1:100:31
+8      117147060       rs10109846      A       G       .       PASS    AA=G;DP=110     GT:GQ:DP        1|1:41:13       1|1:89:28       1|1:100:70
+7      120613834       rs6968716       C       T       .       PASS    AA=T;DP=72      GT:GQ:DP        1|1:41:14       1|1:44:13       1|1:100:45
+6      47197503        rs1687119       A       G       .       PASS    AA=A;DP=91      GT:GQ:DP        1|1:41:16       0|0:51:18       1|0:100:58
+3      195838625       rs6788774       A       G       .       PASS    AA=G;DP=66      GT:GQ:DP        1|1:41:16       1|1:35:12       1|1:90:30
+16     63992199        rs2642801       G       A       .       PASS    AA=A;DP=66      GT:GQ:DP        1|1:41:16       1|1:47:14       1|1:100:36
+3      56930568        rs6445840       T       C       .       PASS    AA=C;DP=128     GT:GQ:DP        1|1:41:16       1|1:83:32       1|1:100:81
+2      68964434        rs4567971       C       G       .       PASS    AA=G;DP=102     GT:GQ:DP        1|1:41:17       1|1:65:21       1|1:100:65
+12     27365958        rs4369500       T       C       .       PASS    AA=T;DP=68      GT:GQ:DP        1|1:41:19       1|0:96:16       1|1:56:24
+6      123451546       rs4301317       T       C       .       PASS    AA=C;DP=94      GT:GQ:DP        1|1:41:19       1|1:23:18       1|1:100:58
+X      117337992       rs1716763       A       C       .       PASS    AA=C;DP=84      GT:GQ:DP        1|1:41:19       1|1:45:19       1|1:100:28
+2      58359945        rs2024410       C       T       .       PASS    AA=T;DP=78      GT:GQ:DP        1|1:41:19       1|1:53:16       1|1:100:43
+14     40180595        rs2415630       T       G       .       PASS    AA=N;DP=88      GT:GQ:DP        1|1:41:19       1|1:62:19       1|1:100:47
+15     33984810        rs7165999       T       C       .       PASS    AA=C;DP=107     GT:GQ:DP        1|1:41:20       1|0:80:27       1|1:100:60
+6      132606672       rs9321333       A       T       .       PASS    AA=T;DP=100     GT:GQ:DP        1|1:41:21       0|0:60:20       1|0:100:59
+7      111526728       rs6961538       A       G       .       PASS    AA=A;DP=117     GT:GQ:DP        1|1:41:21       0|0:69:25       1|0:100:71
+2      147571130       rs809009        C       T       .       PASS    AA=C;DP=111     GT:GQ:DP        1|1:41:21       1|0:100:23      1|1:38:68
+7      56491110        rs13242355      T       C       .       PASS    AA=N;DP=74      GT:GQ:DP        1|1:41:21       1|0:89:15       1|1:42:25
+18     47574787        rs905732        T       G       .       PASS    AA=G;DP=90      GT:GQ:DP        1|1:41:22       1|1:33:23       1|1:100:45
+5      7748845 rs11134251      C       A       .       PASS    AA=C;DP=116     GT:GQ:DP        1|1:41:23       1|0:100:19      1|1:100:80
+1      14997268        rs1626210       G       A       .       PASS    AA=G;DP=135     GT:GQ:DP        1|1:41:23       1|0:100:25      1|1:100:87
+7      134056540       rs17168006      G       A       .       PASS    AA=G;DP=111     GT:GQ:DP        1|1:41:23       1|0:45:15       1|1:100:75
+1      236979736       rs3001437       G       C       .       PASS    AA=G;DP=95      GT:GQ:DP        1|1:41:23       1|0:89:30       1|1:64:41
+1      68124932        rs1938448       A       C       .       PASS    AA=C;DP=107     GT:GQ:DP        1|1:41:23       1|1:100:35      1|1:100:46
+16     87332732        rs12443723      G       A       .       PASS    AA=G;DP=65      GT:GQ:DP        1|1:41:23       1|1:23:13       1|1:81:24
+6      62545715        rs1322082       C       T       .       PASS    AA=T;DP=68      GT:GQ:DP        1|1:41:23       1|1:26:12       1|1:76:26
+15     85475317        rs1392164       T       C       .       PASS    AA=t;DP=91      GT:GQ:DP        1|1:41:23       1|1:27:18       1|1:100:48
+4      56867343        rs7693930       G       C       .       PASS    AA=G;DP=81      GT:GQ:DP        1|1:41:23       1|1:35:10       1|1:100:49
+2      133320633       rs1839004       T       C       .       PASS    AA=C;DP=94      GT:GQ:DP        1|1:41:23       1|1:38:18       1|1:100:41
+7      20717776        rs60057191      A       G       .       PASS    AA=A;DP=112     GT:GQ:DP        1|1:41:23       1|1:41:18       1|1:100:71
+9      13131787        rs7871112       C       A       .       PASS    AA=A;DP=101     GT:GQ:DP        1|1:41:23       1|1:56:17       1|1:100:62
+10     131160093       rs1762432       T       G       .       PASS    AA=G;DP=110     GT:GQ:DP        1|1:41:23       1|1:58:18       1|1:100:73
+5      156694168       rs1249  T       C       .       PASS    AA=C;DP=107     GT:GQ:DP        1|1:41:23       1|1:62:21       1|1:100:64
+8      120108643       rs1485295       A       G       .       PASS    AA=G;DP=99      GT:GQ:DP        1|1:41:23       1|1:62:27       1|1:100:50
+10     2913925 rs1909671       T       G       .       PASS    AA=G;DP=110     GT:GQ:DP        1|1:41:23       1|1:80:25       1|1:100:63
+15     58578913        rs2054034       T       C       .       PASS    AA=t;DP=102     GT:GQ:DP        1|1:41:24       1|1:33:23       1|1:100:56
+22     25650093        rs6005236       T       G       .       PASS    AA=T;DP=121     GT:GQ:DP        1|1:41:25       1|0:100:24      1|1:100:74
+6      88593209        .       T       C       .       PASS    AA=T;DP=94      GT:GQ:DP        1|1:41:25       1|0:32:11       1|1:90:42
+4      90255122        rs12645173      G       A       .       PASS    AA=A;DP=117     GT:GQ:DP        1|1:41:25       1|0:57:22       1|1:100:68
+17     50927796        rs12601773      T       A       .       PASS    AA=A;DP=109     GT:GQ:DP        1|1:41:25       1|0:83:12       1|1:100:73
+14     54337871        rs6572978       C       T       .       PASS    AA=C;DP=103     GT:GQ:DP        1|1:41:25       1|0:92:26       1|1:90:52
+15     90771909        rs2892364       T       C       .       PASS    AA=T;DP=105     GT:GQ:DP        1|1:41:25       1|0:97:23       1|1:100:55
+14     31325287        rs1430424       G       A       .       PASS    AA=G;DP=122     GT:GQ:DP        1|1:41:26       0|1:100:19      1|0:100:80
+8      92538682        rs6471283       T       G       .       PASS    AA=G;DP=85      GT:GQ:DP        1|1:41:26       0|1:100:24      1|0:100:25
+19     60982173        rs8112907       C       T       .       PASS    AA=c;DP=127     GT:GQ:DP        1|1:41:26       0|1:100:25      1|0:100:78
+7      93117098        rs17165638      A       G       .       PASS    AA=A;DP=103     GT:GQ:DP        1|1:41:26       0|1:100:26      1|0:100:52
+4      29849106        rs2571467       T       A       .       PASS    AA=A;DP=116     GT:GQ:DP        1|1:41:26       0|1:100:30      1|0:100:61
+8      72856424        rs13267931      C       G       .       PASS    AA=G;DP=117     GT:GQ:DP        1|1:41:26       0|1:100:34      1|0:100:55
+6      166287419       rs213997        G       A       .       PASS    AA=g;DP=111     GT:GQ:DP        1|1:41:26       0|1:77:16       1|0:100:70
+2      224771370       rs2602673       A       G       .       PASS    AA=G;DP=136     GT:GQ:DP        1|1:41:26       0|1:79:17       1|0:100:92
+11     14815080        rs7938369       T       C       .       PASS    AA=C;DP=96      GT:GQ:DP        1|1:41:26       1|1:44:14       1|1:100:47
+2      44481326        rs1067330       A       G       .       PASS    AA=G;DP=84      GT:GQ:DP        1|1:41:26       1|1:56:18       1|1:100:31
+3      120314283       rs6438486       A       C       .       PASS    AA=N;DP=118     GT:GQ:DP        1|1:41:27       1|1:34:23       1|1:100:66
+19     38098951        rs8104077       A       G       .       PASS    AA=G;DP=75      GT:GQ:DP        1|1:41:27       1|1:38:11       1|1:100:31
+18     10108813        .       A       G       .       PASS    AA=G;DP=119     GT:GQ:DP        1|1:41:28       0|1:100:29      1|0:100:62
+1      23517248        rs2806553       T       A       .       PASS    AA=T;DP=74      GT:GQ:DP        1|1:41:28       0|1:92:12       1|0:59:35
+4      10335708        rs11939216      C       T       .       PASS    AA=T;DP=134     GT:GQ:DP        1|1:41:29       0|0:51:18       1|0:100:86
+4      73708845        rs10005027      C       T       .       PASS    AA=C;DP=114     GT:GQ:DP        1|1:41:29       1|0:64:21       1|1:100:63
+9      29002266        rs1930731       A       G       .       PASS    AA=G;DP=88      GT:GQ:DP        1|1:41:29       1|0:80:19       1|1:80:32
+7      36089507        rs2002872       G       A       .       PASS    AA=G;DP=91      GT:GQ:DP        1|1:41:29       1|1:35:16       1|1:94:36
+6      121753348       rs6923956       C       A       .       PASS    AA=A;DP=123     GT:GQ:DP        1|1:41:29       1|1:53:16       1|1:100:78
+3      127658802       rs777505        G       A       .       PASS    AA=G;DP=130     GT:GQ:DP        1|1:41:31       0|0:75:25       1|0:100:70
+X      25475223        rs5986247       T       C       .       PASS    AA=T;DP=113     GT:GQ:DP        1|1:42:14       1|0:100:16      1|1:100:41
+2      160908511       rs4597468       T       C       .       PASS    AA=C;DP=88      GT:GQ:DP        1|1:42:14       1|0:100:18      1|1:98:52
+X      49777796        .       C       T       .       PASS    AA=C;DP=108     GT:GQ:DP        1|1:42:14       1|0:100:21      1|1:93:31
+11     7771647 .       C       A       .       PASS    AA=a;DP=55      GT:GQ:DP        1|1:42:14       1|0:65:12       1|1:65:27
+4      68117067        rs6826522       G       A       .       PASS    AA=A;DP=73      GT:GQ:DP        1|1:42:14       1|0:65:23       1|1:87:29
+12     82384706        rs10779004      A       G       .       PASS    AA=A;DP=70      GT:GQ:DP        1|1:42:14       1|0:68:17       1|1:75:26
+16     54773437        rs1734197       C       T       .       PASS    AA=T;DP=72      GT:GQ:DP        1|1:42:14       1|0:73:16       1|1:93:31
+13     68156511        rs287426        C       T       .       PASS    AA=T;DP=65      GT:GQ:DP        1|1:42:14       1|0:80:12       1|1:96:32
+3      155082715       rs55747865      T       C       .       PASS    AA=T;DP=92      GT:GQ:DP        1|1:42:14       1|0:83:16       1|1:100:62
+X      128024334       rs6529329       T       A       .       PASS    AA=A;DP=101     GT:GQ:DP        1|1:42:14       1|0:85:20       1|1:100:35
+13     37201686        rs1577007       C       T       .       PASS    AA=T;DP=96      GT:GQ:DP        1|1:42:14       1|0:93:20       1|1:100:63
+5      24595036        rs6892579       T       G       .       PASS    AA=T;DP=60      GT:GQ:DP        1|1:42:15       0|1:100:13      1|0:100:22
+21     26979989        rs2830381       G       C       .       PASS    AA=G;DP=97      GT:GQ:DP        1|1:42:15       0|1:100:17      1|0:100:28
+X      7488401 rs9887473       T       C       .       PASS    AA=T;DP=117     GT:GQ:DP        1|1:42:15       0|1:100:21      1|0:100:35
+6      49324599        rs9369871       C       T       .       PASS    AA=C;DP=94      GT:GQ:DP        1|1:42:15       0|1:100:21      1|0:100:58
+13     86175121        rs3015519       G       T       .       PASS    AA=T;DP=93      GT:GQ:DP        1|1:42:15       0|1:100:22      1|0:100:56
+4      172884330       rs10020928      T       C       .       PASS    AA=C;DP=98      GT:GQ:DP        1|1:42:15       0|1:100:22      1|0:100:60
+7      17911608        rs2691558       G       T       .       PASS    AA=G;DP=98      GT:GQ:DP        1|1:42:15       0|1:100:23      1|0:100:61
+6      43401344        rs2651201       G       A       .       PASS    AA=G;DP=110     GT:GQ:DP        1|1:42:15       0|1:100:24      1|0:100:72
+18     1588077 rs12605872      G       A       .       PASS    AA=G;DP=112     GT:GQ:DP        1|1:42:15       0|1:100:25      1|0:100:74
+X      102838308       rs5945801       G       A       .       PASS    AA=A;DP=136     GT:GQ:DP        1|1:42:15       0|1:100:28      1|0:100:32
+X      87195928        rs7887799       A       G       .       PASS    AA=.;DP=103     GT:GQ:DP        1|1:42:15       0|1:100:28      1|0:100:40
+X      10698450        .       G       T       .       PASS    AA=N;DP=109     GT:GQ:DP        1|1:42:15       0|1:100:29      1|0:100:33
+3      127701478       rs6774768       T       C       .       PASS    AA=C;DP=85      GT:GQ:DP        1|1:42:15       0|1:39:14       1|0:100:55
+17     49011317        rs8078654       C       A       .       PASS    AA=c;DP=81      GT:GQ:DP        1|1:42:15       0|1:40:22       1|0:100:35
+4      46725519        .       C       A       .       PASS    AA=C;DP=64      GT:GQ:DP        1|1:42:15       0|1:42:13       1|0:100:29
+2      141018406       rs10191143      A       G       .       PASS    AA=a;DP=89      GT:GQ:DP        1|1:42:15       0|1:47:16       1|0:100:53
+4      14142531        rs1553278       T       C       .       PASS    AA=C;DP=99      GT:GQ:DP        1|1:42:15       0|1:63:19       1|0:100:65
+6      18685437        rs1983569       A       G       .       PASS    AA=G;DP=78      GT:GQ:DP        1|1:42:15       0|1:65:14       1|0:100:49
+10     73359839        rs10762494      A       G       .       PASS    AA=-;DP=71      GT:GQ:DP        1|1:42:15       0|1:68:9        1|0:100:48
+11     130405428       rs1433983       G       A       .       PASS    AA=A;DP=108     GT:GQ:DP        1|1:42:15       0|1:82:17       1|0:100:77
+X      138730884       rs1338059       C       A       .       PASS    AA=A;DP=84      GT:GQ:DP        1|1:42:15       0|1:87:13       1|0:100:27
+X      68118550        rs1277960       C       T       .       PASS    AA=C;DP=108     GT:GQ:DP        1|1:42:15       0|1:92:25       1|0:100:37
+8      34924703        rs28693643      A       G       .       PASS    AA=G;DP=91      GT:GQ:DP        1|1:42:15       0|1:94:15       1|0:100:50
+X      151513092       rs10126506      C       G       .       PASS    AA=G;DP=78      GT:GQ:DP        1|1:42:15       0|1:95:20       1|0:100:24
+X      15317016        rs2187637       G       C       .       PASS    AA=G;DP=112     GT:GQ:DP        1|1:42:15       1|0:100:22      1|1:100:40
+X      34581909        rs6632042       C       A       .       PASS    AA=c;DP=99      GT:GQ:DP        1|1:42:15       1|0:100:22      1|1:99:37
+8      39883012        rs6474192       A       G       .       PASS    AA=G;DP=94      GT:GQ:DP        1|1:42:15       1|0:100:26      1|1:100:53
+8      96533739        rs7006517       C       T       .       PASS    AA=T;DP=96      GT:GQ:DP        1|1:42:15       1|0:100:29      1|1:100:51
+14     90654140        rs8007888       A       G       .       PASS    AA=G;DP=70      GT:GQ:DP        1|1:42:15       1|0:82:16       1|1:55:41
+X      48969682        .       G       A       .       PASS    AA=N;DP=101     GT:GQ:DP        1|1:42:15       1|0:93:22       1|1:100:38
+4      60318811        rs7698941       G       A       .       PASS    AA=A;DP=80      GT:GQ:DP        1|1:42:16       0|1:100:18      1|0:100:44
+1      208836489       rs4845063       G       A       .       PASS    AA=A;DP=109     GT:GQ:DP        1|1:42:16       0|1:100:25      1|0:100:68
+2      164840960       rs1561467       T       A       .       PASS    AA=-;DP=113     GT:GQ:DP        1|1:42:16       0|1:100:26      1|0:100:61
+10     982179  .       G       T       .       PASS    AA=g;DP=103     GT:GQ:DP        1|1:42:16       0|1:100:32      1|0:100:55
+X      3085125 rs7881730       C       A       .       PASS    AA=C;DP=97      GT:GQ:DP        1|1:42:16       0|1:95:13       1|0:100:46
+X      47722804        rs5953132       C       T       .       PASS    AA=T;DP=119     GT:GQ:DP        1|1:42:16       1|0:100:31      1|1:100:45
+X      12864371        rs5935471       A       G       .       PASS    AA=G;DP=99      GT:GQ:DP        1|1:42:17       0|1:69:27       1|0:100:30
+X      58074350        .       T       A       .       PASS    AA=.;DP=94      GT:GQ:DP        1|1:42:17       0|1:98:16       1|0:100:24
+10     67206171        rs1904744       A       G       .       PASS    AA=A;DP=85      GT:GQ:DP        1|1:42:17       1|0:59:12       1|1:38:58
+5      162330501       rs1824274       A       T       .       PASS    AA=A;DP=108     GT:GQ:DP        1|1:42:20       1|0:100:23      1|1:100:64
+10     128406680       rs7091608       C       T       .       PASS    AA=C;DP=107     GT:GQ:DP        1|1:42:20       1|0:85:20       1|1:100:64
+4      24938281        rs4334743       A       C       .       PASS    AA=C;DP=77      GT:GQ:DP        1|1:42:20       1|1:13:12       1|1:85:40
+4      153415306       rs4696317       T       C       .       PASS    AA=C;DP=91      GT:GQ:DP        1|1:42:20       1|1:56:18       1|1:100:53
+3      79630828        .       A       T       .       PASS    AA=a;DP=96      GT:GQ:DP        1|1:42:21       1|1:50:15       1|1:100:60
+9      10453537        rs6474553       A       C       .       PASS    AA=C;DP=89      GT:GQ:DP        1|1:42:21       1|1:50:25       1|1:87:30
+16     78913364        rs1401205       G       T       .       PASS    AA=T;DP=100     GT:GQ:DP        1|1:42:23       0|0:36:23       1|0:100:54
+6      32638523        .       T       C       .       PASS    AA=-;DP=126     GT:GQ:DP        1|1:42:23       0|1:23:26       1|0:42:77
+2      241004578       rs6743729       T       G       .       PASS    AA=G;DP=82      GT:GQ:DP        1|1:42:23       1|1:19:16       1|1:83:42
+2      152679275       rs4368328       A       T       .       PASS    AA=T;DP=107     GT:GQ:DP        1|1:42:23       1|1:54:29       1|1:100:55
+16     73185309        rs8058229       C       G       .       PASS    AA=G;DP=102     GT:GQ:DP        1|1:42:23       1|1:56:20       1|1:100:60
+3      193345273       rs9846559       A       G       .       PASS    AA=A;DP=125     GT:GQ:DP        1|1:42:24       0|0:72:25       1|0:100:26
+17     60168270        .       A       G       .       PASS    AA=G;DP=103     GT:GQ:DP        1|1:42:24       0|0:96:32       1|0:100:38
+17     52827320        rs8072935       A       G       .       PASS    AA=A;DP=119     GT:GQ:DP        1|1:42:24       0|1:92:24       1|0:100:72
+2      232720345       rs3845832       A       G       .       PASS    AA=A;DP=105     GT:GQ:DP        1|1:42:24       1|0:85:26       1|1:100:57
+2      16730882        rs2342000       G       C       .       PASS    AA=C;DP=67      GT:GQ:DP        1|1:42:24       1|1:14:11       1|1:89:31
+4      83677457        rs11946703      C       T       .       PASS    AA=c;DP=92      GT:GQ:DP        1|1:42:24       1|1:14:9        1|1:100:60
+11     88019346        rs11020775      A       G       .       PASS    AA=A;DP=107     GT:GQ:DP        1|1:42:26       0|0:75:27       1|0:100:52
+11     72706894        rs11827650      G       C       .       PASS    AA=C;DP=89      GT:GQ:DP        1|1:42:26       0|1:51:11       1|0:100:45
+18     74811475        rs8094455       C       T       .       PASS    AA=C;DP=113     GT:GQ:DP        1|1:42:27       0|0:27:20       1|0:100:66
+7      14391203        rs12699613      G       T       .       PASS    AA=G;DP=94      GT:GQ:DP        1|1:42:27       0|0:30:19       1|0:100:49
+19     24186425        rs4310991       A       G       .       PASS    AA=.;DP=110     GT:GQ:DP        1|1:42:27       0|0:44:20       1|0:100:65
+4      91482519        rs6827827       G       A       .       PASS    AA=G;DP=119     GT:GQ:DP        1|1:42:27       0|0:81:28       1|0:100:26
+2      118623586       rs13036218      A       C       .       PASS    AA=A;DP=137     GT:GQ:DP        1|1:42:27       0|0:87:29       1|0:100:83
+11     124042004       rs7119225       C       T       .       PASS    AA=T;DP=117     GT:GQ:DP        1|1:42:27       0|0:99:34       1|0:100:59
+1      161632772       rs3010353       G       T       .       PASS    AA=T;DP=88      GT:GQ:DP        1|1:42:27       1|1:44:13       1|1:100:36
+18     18901171        rs7245285       G       A       .       PASS    AA=N;DP=90      GT:GQ:DP        1|1:42:28       1|1:15:13       1|1:100:37
+1      160911035       rs10799862      T       C       .       PASS    AA=T;DP=117;HM2;HM3     GT:GQ:DP        1|1:42:29       1|0:69:18       1|1:100:68
+8      124688520       rs10096049      C       A       .       PASS    AA=C;DP=106     GT:GQ:DP        1|1:42:31       0|0:39:13       1|0:100:61
+X      66545597        rs2497912       C       T       .       PASS    AA=.;DP=90      GT:GQ:DP        1|1:43:13       1|1:13:12       1|1:100:46
+X      108698011       rs942602        G       A       .       PASS    AA=g;DP=129     GT:GQ:DP        1|1:43:16       0|0:100:35      1|0:100:33
+8      115047566       rs7835123       G       A       .       PASS    AA=A;DP=136     GT:GQ:DP        1|1:43:16       0|0:100:40      1|0:100:82
+1      2811480 rs2606405       G       A       .       PASS    AA=A;DP=61      GT:GQ:DP        1|1:43:16       0|0:18:6        1|0:100:29
+15     89852334        rs8043003       G       A       .       PASS    AA=A;DP=94      GT:GQ:DP        1|1:43:16       0|0:24:19       1|0:100:58
+X      41696456        .       G       A       .       PASS    AA=G;DP=105     GT:GQ:DP        1|1:43:16       0|0:24:26       1|0:100:26
+4      67590474        rs17087894      A       T       .       PASS    AA=A;DP=95      GT:GQ:DP        1|1:43:16       0|0:28:16       1|0:100:63
+21     19359553        rs2406880       A       C       .       PASS    AA=A;DP=99      GT:GQ:DP        1|1:43:16       0|0:30:10       1|0:100:73
+2      4954224 rs17020329      C       T       .       PASS    AA=C;DP=100     GT:GQ:DP        1|1:43:16       0|0:33:11       1|0:100:74
+10     33205090        rs2488304       C       G       .       PASS    AA=G;DP=96      GT:GQ:DP        1|1:43:16       0|0:39:13       1|0:100:67
+X      24191491        rs56358281      C       A       .       PASS    AA=C;DP=109     GT:GQ:DP        1|1:43:16       0|0:41:25       1|0:100:42
+X      139842382       rs56969309      G       A       .       PASS    AA=G;DP=100     GT:GQ:DP        1|1:43:16       0|0:48:16       1|0:100:27
+9      36718585        rs1001159       C       T       .       PASS    AA=C;DP=103     GT:GQ:DP        1|1:43:16       0|0:48:16       1|0:100:72
+18     36677999        rs9946935       T       C       .       PASS    AA=N;DP=68      GT:GQ:DP        1|1:43:16       0|0:48:17       1|0:100:32
+X      32827171        rs5928104       C       T       .       PASS    AA=T;DP=104     GT:GQ:DP        1|1:43:16       0|0:51:18       1|0:100:39
+X      151196430       rs13440586      T       C       .       PASS    AA=t;DP=76      GT:GQ:DP        1|1:43:16       0|0:54:18       1|0:100:26
+1      187348464       rs58218860      C       T       .       PASS    AA=T;DP=72      GT:GQ:DP        1|1:43:16       0|0:57:19       1|0:100:39
+5      114225023       rs6889672       C       T       .       PASS    AA=T;DP=88      GT:GQ:DP        1|1:43:16       0|0:60:20       1|0:100:54
+18     74124373        rs12956869      G       A       .       PASS    AA=A;DP=74      GT:GQ:DP        1|1:43:16       0|0:60:21       1|0:100:37
+22     47694900        .       T       C       .       PASS    AA=t;DP=65      GT:GQ:DP        1|1:43:16       0|0:63:21       1|0:100:17
+13     90537231        rs965648        C       T       .       PASS    AA=T;DP=88      GT:GQ:DP        1|1:43:16       0|0:63:22       1|0:100:36
+15     47949743        rs13329598      G       A       .       PASS    AA=A;DP=108     GT:GQ:DP        1|1:43:16       0|0:63:22       1|0:100:62
+2      117654794       rs17040921      C       T       .       PASS    AA=T;DP=85      GT:GQ:DP        1|1:43:16       0|0:66:22       1|0:100:47
+16     60993313        rs13336869      G       A       .       PASS    AA=G;DP=88      GT:GQ:DP        1|1:43:16       0|0:66:22       1|0:100:51
+4      68637815        rs6552147       T       G       .       PASS    AA=G;DP=95      GT:GQ:DP        1|1:43:16       0|0:66:22       1|0:100:60
+5      34027294        rs10039465      T       C       .       PASS    AA=T;DP=103     GT:GQ:DP        1|1:43:16       0|0:66:23       1|0:100:64
+X      11460052        rs28567941      T       C       .       PASS    AA=C;DP=122     GT:GQ:DP        1|1:43:16       0|0:66:24       1|0:100:50
+X      112763676       .       A       T       .       PASS    AA=T;DP=105     GT:GQ:DP        1|1:43:16       0|0:69:23       1|0:100:32
+X      149674577       .       A       G       .       PASS    AA=A;DP=130     GT:GQ:DP        1|1:43:16       0|0:69:23       1|0:100:48
+7      90159356        rs17772764      G       A       .       PASS    AA=G;DP=97      GT:GQ:DP        1|1:43:16       0|0:69:24       1|0:100:56
+X      85770410        rs5923574       G       A       .       PASS    AA=G;DP=106     GT:GQ:DP        1|1:43:16       0|0:75:26       1|0:100:22
+X      123507134       rs5958519       C       T       .       PASS    AA=T;DP=94      GT:GQ:DP        1|1:43:16       0|0:78:27       1|0:100:30
+8      123252678       rs6470069       C       T       .       PASS    AA=T;DP=95      GT:GQ:DP        1|1:43:16       0|0:81:27       1|0:100:51
+4      118994642       rs35385554      G       A       .       PASS    AA=A;DP=90      GT:GQ:DP        1|1:43:16       0|0:81:29       1|0:100:45
+X      32382156        .       T       C       .       PASS    AA=T;DP=112     GT:GQ:DP        1|1:43:16       0|0:84:28       1|0:100:33
+X      137349752       .       T       C       .       PASS    AA=t;DP=123     GT:GQ:DP        1|1:43:16       0|0:84:28       1|0:100:43
+1      164451915       rs6660148       A       G       .       PASS    AA=a;DP=137     GT:GQ:DP        1|1:43:16       0|0:84:29       1|0:100:50
+X      16242945        rs4831019       T       C       .       PASS    AA=C;DP=109     GT:GQ:DP        1|1:43:16       0|0:90:31       1|0:100:41
+15     99257342        rs56063524      A       C       .       PASS    AA=A;DP=106     GT:GQ:DP        1|1:43:17       0|0:33:19       1|0:100:56
+X      41040938        rs5963239       T       C       .       PASS    AA=t;DP=87      GT:GQ:DP        1|1:43:17       0|0:41:25       1|0:100:25
+14     85713734        .       T       C       .       PASS    AA=T;DP=66      GT:GQ:DP        1|1:43:17       0|0:48:17       1|0:86:21
+X      98394368        rs57570924      C       T       .       PASS    AA=C;DP=114     GT:GQ:DP        1|1:43:17       0|0:48:20       1|0:100:41
+4      22202166        rs10012903      C       G       .       PASS    AA=G;DP=87      GT:GQ:DP        1|1:43:17       0|0:54:20       1|0:100:47
+7      85407531        rs2524940       T       G       .       PASS    AA=G;DP=93      GT:GQ:DP        1|1:43:17       0|0:57:19       1|0:100:58
+18     36870297        .       C       T       .       PASS    AA=C;DP=106     GT:GQ:DP        1|1:43:17       0|0:64:26       1|0:100:65
+X      40050425        .       C       A       .       PASS    AA=C;DP=145     GT:GQ:DP        1|1:43:17       0|0:67:34       1|0:100:58
+3      152706258       rs12639049      A       G       .       PASS    AA=A;DP=92      GT:GQ:DP        1|1:43:17       0|0:72:30       1|0:100:37
+X      110742609       .       G       A       .       PASS    AA=G;DP=138     GT:GQ:DP        1|1:43:17       0|0:90:33       1|0:100:46
+14     28940257        rs10130620      T       C       .       PASS    AA=C;DP=83      GT:GQ:DP        1|1:43:18       0|0:44:26       1|0:100:26
+11     68469553        rs497685        C       T       .       PASS    AA=t;DP=95      GT:GQ:DP        1|1:43:18       0|0:45:15       1|0:100:62
+X      118426009       rs56293736      G       A       .       PASS    AA=g;DP=122     GT:GQ:DP        1|1:43:18       0|0:72:24       1|0:100:54
+10     68093978        rs2394278       A       G       .       PASS    AA=G;DP=72      GT:GQ:DP        1|1:43:18       1|1:62:19       1|1:100:35
+4      174633646       rs5009172       A       G       .       PASS    AA=G;DP=104     GT:GQ:DP        1|1:43:19       1|1:21:16       1|1:100:71
+6      25342351        rs9295650       T       C       .       PASS    AA=C;DP=93      GT:GQ:DP        1|1:43:19       1|1:28:22       1|1:100:51
+8      3899807 rs2740882       C       T       .       PASS    AA=T;DP=99      GT:GQ:DP        1|1:43:19       1|1:68:21       1|1:100:46
+20     58971778        rs6015887       C       T       .       PASS    AA=T;DP=92      GT:GQ:DP        1|1:43:19       1|1:74:23       1|1:100:47
+2      186972982       rs10164481      T       A       .       PASS    AA=A;DP=63      GT:GQ:DP        1|1:43:20       1|1:15:11       1|1:83:27
+3      11468309        rs2454507       C       A       .       PASS    AA=C;DP=79      GT:GQ:DP        1|1:43:21       1|1:31:21       1|1:78:27
+6      46908416        rs9472885       T       C       .       PASS    AA=C;DP=124     GT:GQ:DP        1|1:43:22       0|1:84:28       1|0:100:77
+10     17507022        rs11592196      A       G       .       PASS    AA=A;DP=70      GT:GQ:DP        1|1:43:22       1|0:64:10       1|1:68:29
+6      85232557        rs4265008       A       C       .       PASS    AA=C;DP=80      GT:GQ:DP        1|1:43:22       1|1:59:18       1|1:100:40
+12     59054500        rs2468380       C       T       .       PASS    AA=C;DP=108     GT:GQ:DP        1|1:43:23       0|0:78:27       1|0:100:58
+6      127105676       rs853970        A       G       .       PASS    AA=A;DP=114     GT:GQ:DP        1|1:43:23       1|0:100:30      1|1:99:63
+18     4509700 rs9963772       C       A       .       PASS    AA=A;DP=86      GT:GQ:DP        1|1:43:23       1|1:68:22       1|1:82:30
+4      115158890       rs11098221      G       A       .       PASS    AA=A;DP=110     GT:GQ:DP        1|1:43:24       1|0:100:24      1|1:100:63
+4      32965486        rs2586000       C       T       .       PASS    AA=C;DP=127     GT:GQ:DP        1|1:43:24       1|0:100:24      1|1:100:83
+16     57874692        rs11861908      G       C       .       PASS    AA=C;DP=121     GT:GQ:DP        1|1:43:24       1|1:100:34      1|1:100:64
+6      151681734       rs12203527      G       C       .       PASS    AA=C;DP=106     GT:GQ:DP        1|1:43:24       1|1:33:15       1|1:100:67
+16     4017278 rs8055604       C       G       .       PASS    AA=G;DP=113     GT:GQ:DP        1|1:43:24       1|1:33:22       1|1:100:60
+1      65776442        rs1171267       T       G       .       PASS    AA=T;DP=71;HM2  GT:GQ:DP        1|1:43:24       1|1:35:16       1|1:65:22
+8      116883099       rs800585        T       A       .       PASS    AA=A;DP=99      GT:GQ:DP        1|1:43:24       1|1:37:16       1|1:100:59
+3      192658795       rs709146        C       G       .       PASS    AA=G;DP=93      GT:GQ:DP        1|1:43:24       1|1:38:16       1|1:100:52
+4      9564334 rs7375642       A       G       .       PASS    AA=a;DP=76      GT:GQ:DP        1|1:43:24       1|1:41:12       1|1:100:37
+2      172437144       rs6736159       T       C       .       PASS    AA=C;DP=120     GT:GQ:DP        1|1:43:24       1|1:42:26       1|1:100:71
+2      111651949       rs7565457       C       T       .       PASS    AA=G;DP=89      GT:GQ:DP        1|1:43:24       1|1:47:14       1|1:100:41
+16     75574759        rs157824        T       G       .       PASS    AA=t;DP=100     GT:GQ:DP        1|1:43:24       1|1:47:14       1|1:100:61
+5      75281188        rs10061646      T       C       .       PASS    AA=C;DP=114     GT:GQ:DP        1|1:43:24       1|1:49:26       1|1:100:66
+6      107215959       rs3101497       A       G       .       PASS    AA=G;DP=92      GT:GQ:DP        1|1:43:24       1|1:50:15       1|1:100:53
+8      12982205        rs2460361       G       C       .       PASS    AA=C;DP=105     GT:GQ:DP        1|1:43:24       1|1:50:18       1|1:100:63
+2      159867147       rs174252        G       A       .       PASS    AA=A;DP=102     GT:GQ:DP        1|1:43:24       1|1:53:16       1|1:100:61
+6      111614089       rs354525        G       A       .       PASS    AA=G;DP=111     GT:GQ:DP        1|1:43:24       1|1:55:30       1|1:100:56
+5      16799042        rs7730837       C       A       .       PASS    AA=a;DP=83      GT:GQ:DP        1|1:43:24       1|1:56:17       1|1:100:41
+18     46499961        rs6508029       C       A       .       PASS    AA=A;DP=109     GT:GQ:DP        1|1:43:24       1|1:56:17       1|1:100:69
+10     86817589        rs4934068       C       T       .       PASS    AA=T;DP=117     GT:GQ:DP        1|1:43:24       1|1:57:33       1|1:100:61
+21     27495621        rs2039267       T       C       .       PASS    AA=C;DP=108     GT:GQ:DP        1|1:43:24       1|1:62:19       1|1:100:65
+7      78826792        rs848956        T       C       .       PASS    AA=C;DP=121     GT:GQ:DP        1|1:43:24       1|1:62:21       1|1:100:35
+4      40228054        rs3114381       C       T       .       PASS    AA=T;DP=122     GT:GQ:DP        1|1:43:24       1|1:65:20       1|1:100:75
+16     60537701        rs7200802       G       A       .       PASS    AA=A;DP=122     GT:GQ:DP        1|1:43:24       1|1:71:23       1|1:100:70
+10     16496266        rs10904731      A       G       .       PASS    AA=G;DP=104     GT:GQ:DP        1|1:43:24       1|1:74:24       1|1:100:58
+7      76892827        rs2301928       T       G       .       PASS    AA=G;DP=96      GT:GQ:DP        1|1:43:25       1|0:100:28      1|1:91:44
+1      65311841        rs875868        A       C       .       PASS    AA=C;DP=95;HM2  GT:GQ:DP        1|1:43:25       1|1:14:13       1|1:100:54
+1      56573002        rs7365902       T       C       .       PASS    AA=C;DP=86      GT:GQ:DP        1|1:43:25       1|1:50:16       1|1:100:34
+2      21651840        rs1477471       G       A       .       PASS    AA=G;DP=110     GT:GQ:DP        1|1:43:26       0|1:50:23       1|0:100:64
+6      124482769       rs234489        T       G       .       PASS    AA=T;DP=128     GT:GQ:DP        1|1:43:27       0|1:70:17       1|0:100:85
+10     112356898       rs2419567       G       A       .       PASS    AA=G;DP=96      GT:GQ:DP        1|1:43:28       0|1:10:12       1|0:100:57
+13     30782319        rs2313819       G       A       .       PASS    AA=G;DP=111     GT:GQ:DP        1|1:43:28       1|0:100:16      1|1:100:65
+21     38863431        rs2836521       G       T       .       PASS    AA=T;DP=137     GT:GQ:DP        1|1:43:28       1|1:35:20       1|1:100:88
+5      118727850       rs4895369       A       G       .       PASS    AA=A;DP=114     GT:GQ:DP        1|1:43:28       1|1:83:28       1|1:100:60
+15     42013600        rs7166823       C       T       .       PASS    AA=C;DP=132     GT:GQ:DP        1|1:43:31       0|0:41:25       1|0:100:73
+8      95139155        rs28644268      G       A       .       PASS    AA=g;DP=101     GT:GQ:DP        1|1:43:31       0|1:70:14       1|0:100:52
+4      57619514        rs1713953       A       T       .       PASS    AA=A;DP=105     GT:GQ:DP        1|1:43:34       1|0:14:19       1|1:44:51
+3      132752011       rs16837033      G       T       .       PASS    AA=G;DP=142     GT:GQ:DP        1|1:43:35       0|0:60:27       1|0:100:43
+X      38268557        rs5963465       C       T       .       PASS    AA=C;DP=109     GT:GQ:DP        1|1:44:13       1|1:100:36      1|1:100:32
+1      213258366       rs1452609       G       A       .       PASS    AA=G;DP=97;HM2  GT:GQ:DP        1|1:44:13       1|1:24:17       1|1:100:51
+5      166403377       rs2937571       T       C       .       PASS    AA=T;DP=69      GT:GQ:DP        1|1:44:13       1|1:26:13       1|1:100:34
+X      83925355        rs5923104       C       T       .       PASS    AA=c;DP=94      GT:GQ:DP        1|1:44:13       1|1:27:18       1|1:96:25
+X      111863388       rs635631        C       T       .       PASS    AA=T;DP=100     GT:GQ:DP        1|1:44:13       1|1:28:16       1|1:100:42
+3      142252656       rs2311493       T       C       .       PASS    AA=C;DP=63      GT:GQ:DP        1|1:44:13       1|1:29:8        1|1:100:29
+5      116322087       rs6862230       G       A       .       PASS    AA=A;DP=68      GT:GQ:DP        1|1:44:13       1|1:34:16       1|1:100:38
+X      55836822        rs4826420       G       A       .       PASS    AA=A;DP=70      GT:GQ:DP        1|1:44:13       1|1:35:10       1|1:100:27
+6      27464846        rs4713091       A       G       .       PASS    AA=G;DP=84      GT:GQ:DP        1|1:44:13       1|1:36:17       1|1:100:53
+6      123866016       rs9385301       A       T       .       PASS    AA=T;DP=91      GT:GQ:DP        1|1:44:13       1|1:37:20       1|1:100:59
+3      119158233       rs2925313       G       T       .       PASS    AA=T;DP=66      GT:GQ:DP        1|1:44:13       1|1:41:12       1|1:100:32
+5      153550066       rs10038661      G       C       .       PASS    AA=-;DP=69      GT:GQ:DP        1|1:44:13       1|1:41:12       1|1:100:43
+2      218211830       rs10179413      C       G       .       PASS    AA=G;DP=74      GT:GQ:DP        1|1:44:13       1|1:41:12       1|1:100:46
+10     128196090       rs4962567       A       G       .       PASS    AA=G;DP=99      GT:GQ:DP        1|1:44:13       1|1:41:12       1|1:100:70
+3      79146800        rs4507217       G       T       .       PASS    AA=T;DP=55      GT:GQ:DP        1|1:44:13       1|1:47:14       1|1:100:26
+17     2877804 rs4510062       A       G       .       PASS    AA=G;DP=68      GT:GQ:DP        1|1:44:13       1|1:47:14       1|1:100:40
+5      35415339        rs32778 A       G       .       PASS    AA=G;DP=92      GT:GQ:DP        1|1:44:13       1|1:47:14       1|1:100:64
+6      34180766        rs2499715       A       G       .       PASS    AA=G;DP=65      GT:GQ:DP        1|1:44:13       1|1:50:15       1|1:100:32
+7      71005760        rs6959613       G       T       .       PASS    AA=.;DP=83      GT:GQ:DP        1|1:44:13       1|1:50:15       1|1:100:55
+16     63075116        rs4245622       C       T       .       PASS    AA=T;DP=65      GT:GQ:DP        1|1:44:13       1|1:50:16       1|1:100:24
+4      112370506       rs1490906       A       G       .       PASS    AA=G;DP=63      GT:GQ:DP        1|1:44:13       1|1:50:17       1|1:100:22
+X      4961281 rs1562603       T       G       .       PASS    AA=.;DP=97      GT:GQ:DP        1|1:44:13       1|1:52:24       1|1:100:40
+6      33070398        rs206767        C       A       .       PASS    AA=A;DP=78      GT:GQ:DP        1|1:44:13       1|1:53:17       1|1:100:47
+7      145390699       rs1554692       C       A       .       PASS    AA=A;DP=86      GT:GQ:DP        1|1:44:13       1|1:53:17       1|1:100:56
+X      115967973       rs5909630       C       T       .       PASS    AA=T;DP=98      GT:GQ:DP        1|1:44:13       1|1:53:22       1|1:100:29
+12     24062874        rs7132471       A       T       .       PASS    AA=T;DP=81      GT:GQ:DP        1|1:44:13       1|1:56:17       1|1:100:41
+14     85609654        rs9972258       T       C       .       PASS    AA=T;DP=72      GT:GQ:DP        1|1:44:13       1|1:56:17       1|1:100:43
+12     81183008        rs6539653       C       T       .       PASS    AA=T;DP=77      GT:GQ:DP        1|1:44:13       1|1:59:18       1|1:100:45
+11     38243857        rs6484984       A       G       .       PASS    AA=A;DP=92      GT:GQ:DP        1|1:44:13       1|1:59:18       1|1:100:59
+X      147423181       rs7066347       G       C       .       PASS    AA=G;DP=90      GT:GQ:DP        1|1:44:13       1|1:59:21       1|1:100:19
+X      8674744 rs6640227       T       C       .       PASS    AA=C;DP=86      GT:GQ:DP        1|1:44:13       1|1:62:19       1|1:100:27
+X      141288203       rs7060609       C       G       .       PASS    AA=C;DP=93      GT:GQ:DP        1|1:44:13       1|1:62:19       1|1:100:36
+3      21923985        rs171828        T       C       .       PASS    AA=C;DP=83      GT:GQ:DP        1|1:44:13       1|1:62:19       1|1:100:51
+X      95191488        rs2761636       A       G       .       PASS    AA=a;DP=80      GT:GQ:DP        1|1:44:13       1|1:62:20       1|1:100:25
+X      118034695       rs5957095       A       G       .       PASS    AA=G;DP=89      GT:GQ:DP        1|1:44:13       1|1:62:20       1|1:100:39
+X      66174032        rs541238        A       G       .       PASS    AA=G;DP=89      GT:GQ:DP        1|1:44:13       1|1:62:21       1|1:100:26
+X      5674762 rs6639489       A       C       .       PASS    AA=N;DP=105     GT:GQ:DP        1|1:44:13       1|1:62:27       1|1:100:42
+X      117911022       rs261636        T       C       .       PASS    AA=C;DP=96      GT:GQ:DP        1|1:44:13       1|1:64:23       1|1:100:28
+1      187921871       rs537226        C       T       .       PASS    AA=T;DP=91      GT:GQ:DP        1|1:44:13       1|1:65:20       1|1:100:42
+7      10261670        rs7798493       G       A       .       PASS    AA=A;DP=95      GT:GQ:DP        1|1:44:13       1|1:65:20       1|1:100:61
+3      165406049       rs1449931       T       C       .       PASS    AA=t;DP=67      GT:GQ:DP        1|1:44:13       1|1:65:21       1|1:100:22
+X      149451523       rs1894423       T       C       .       PASS    AA=C;DP=105     GT:GQ:DP        1|1:44:13       1|1:65:22       1|1:100:39
+1      156613970       rs7514316       T       C       .       PASS    AA=C;DP=64      GT:GQ:DP        1|1:44:13       1|1:66:24       1|1:92:16
+6      103491286       rs1323209       C       T       .       PASS    AA=T;DP=76      GT:GQ:DP        1|1:44:13       1|1:68:21       1|1:100:43
+X      75783884        rs6647279       G       A       .       PASS    AA=.;DP=111     GT:GQ:DP        1|1:44:13       1|1:68:21       1|1:100:47
+X      83514438        rs2064397       C       G       .       PASS    AA=G;DP=90      GT:GQ:DP        1|1:44:13       1|1:68:22       1|1:100:28
+1      98164494        rs9729900       C       T       .       PASS    AA=T;DP=108     GT:GQ:DP        1|1:44:13       1|1:71:22       1|1:100:34
+X      110054421       rs5942702       C       T       .       PASS    AA=T;DP=79      GT:GQ:DP        1|1:44:13       1|1:74:23       1|1:100:31
+X      6159945 rs1455316       A       G       .       PASS    AA=.;DP=112     GT:GQ:DP        1|1:44:13       1|1:74:25       1|1:100:48
+X      90468377        rs614655        T       C       .       PASS    AA=.;DP=89      GT:GQ:DP        1|1:44:13       1|1:77:25       1|1:100:27
+X      70985795        rs7065689       G       A       .       PASS    AA=A;DP=122     GT:GQ:DP        1|1:44:13       1|1:80:25       1|1:100:53
+X      154015763       rs7885853       C       T       .       PASS    AA=N;DP=111     GT:GQ:DP        1|1:44:13       1|1:80:26       1|1:100:37
+X      31120315        rs2404498       T       G       .       PASS    AA=t;DP=82      GT:GQ:DP        1|1:44:13       1|1:81:29       1|1:100:29
+X      7807102 rs5980270       G       C       .       PASS    AA=C;DP=100     GT:GQ:DP        1|1:44:13       1|1:86:29       1|1:88:24
+4      177947719       rs2333528       A       G       .       PASS    AA=G;DP=111     GT:GQ:DP        1|1:44:13       1|1:92:29       1|1:100:62
+16     81970921        rs1424174       C       A       .       PASS    AA=A;DP=64      GT:GQ:DP        1|1:44:14       1|1:38:11       1|1:100:39
+X      152461314       rs3020947       G       A       .       PASS    AA=A;DP=76      GT:GQ:DP        1|1:44:14       1|1:38:11       1|1:100:41
+16     75371265        .       G       A       .       PASS    AA=G;DP=83      GT:GQ:DP        1|1:44:14       1|1:41:12       1|1:100:53
+X      9832421 rs6640552       A       G       .       PASS    AA=G;DP=103     GT:GQ:DP        1|1:44:14       1|1:47:15       1|1:100:47
+5      4847615 rs1173240       C       T       .       PASS    AA=T;DP=74      GT:GQ:DP        1|1:44:14       1|1:53:16       1|1:100:33
+X      77649488        rs2412154       A       G       .       PASS    AA=G;DP=81      GT:GQ:DP        1|1:44:14       1|1:53:17       1|1:100:23
+X      32123331        rs2606673       T       C       .       PASS    AA=T;DP=103     GT:GQ:DP        1|1:44:14       1|1:56:19       1|1:100:40
+X      64747225        rs28870790      A       G       .       PASS    AA=G;DP=92      GT:GQ:DP        1|1:44:14       1|1:56:22       1|1:100:32
+X      23690547        rs5925924       A       G       .       PASS    AA=N;DP=95      GT:GQ:DP        1|1:44:14       1|1:62:21       1|1:100:31
+4      175142361       rs6841579       A       G       .       PASS    AA=G;DP=91      GT:GQ:DP        1|1:44:14       1|1:65:22       1|1:100:56
+3      80752085        rs7614777       C       T       .       PASS    AA=T;DP=110     GT:GQ:DP        1|1:44:14       1|1:74:23       1|1:100:60
+X      25390209        rs5986399       A       G       .       PASS    AA=G;DP=85      GT:GQ:DP        1|1:44:14       1|1:77:24       1|1:96:25
+5      22532543        rs271101        G       A       .       PASS    AA=N;DP=100     GT:GQ:DP        1|1:44:14       1|1:98:31       1|1:100:46
+4      60118888        rs2128439       A       T       .       PASS    AA=T;DP=89      GT:GQ:DP        1|1:44:15       1|1:74:23       1|1:100:50
+6      31407749        rs9265623       G       A       .       PASS    AA=a;DP=82      GT:GQ:DP        1|1:44:16       0|0:7:12        1|0:100:56
+16     59098498        rs967899        G       T       .       PASS    AA=G;DP=62      GT:GQ:DP        1|1:44:16       1|1:44:13       1|1:100:23
+7      52696457        rs1406528       A       G       .       PASS    AA=G;DP=67      GT:GQ:DP        1|1:44:16       1|1:47:14       1|1:100:25
+3      167529525       .       C       T       .       PASS    AA=C;DP=92      GT:GQ:DP        1|1:44:16       1|1:55:20       1|1:46:57
+1      35227579        rs58598348      G       A       .       PASS    AA=g;DP=68      GT:GQ:DP        1|1:44:17       1|1:40:21       1|1:85:25
+1      86495257        rs12145844      T       C       .       PASS    AA=C;DP=110;HM2 GT:GQ:DP        1|1:44:20       1|0:100:29      1|1:100:62
+4      135892087       rs59288152      T       C       .       PASS    AA=C;DP=78      GT:GQ:DP        1|1:44:20       1|0:60:11       1|1:100:46
+8      12881894        rs2460345       T       C       .       PASS    AA=t;DP=113     GT:GQ:DP        1|1:44:22       0|0:60:20       1|0:100:72
+6      63198435        rs2452464       G       T       .       PASS    AA=G;DP=120     GT:GQ:DP        1|1:44:22       0|1:100:24      1|0:100:74
+5      121353927       rs2913409       G       A       .       PASS    AA=A;DP=102     GT:GQ:DP        1|1:44:22       1|1:52:20       1|1:100:62
+14     28688518        rs4981689       T       G       .       PASS    AA=G;DP=96      GT:GQ:DP        1|1:44:22       1|1:74:23       1|1:100:50
+5      104009289       rs409647        T       C       .       PASS    AA=C;DP=99      GT:GQ:DP        1|1:44:22       1|1:74:23       1|1:100:54
+7      112804517       rs1701833       G       C       .       PASS    AA=C;DP=95      GT:GQ:DP        1|1:44:22       1|1:83:26       1|1:100:47
+12     131695899       rs2323971       T       C       .       PASS    AA=C;DP=101     GT:GQ:DP        1|1:44:23       0|0:48:17       1|0:100:61
+7      1012209 .       T       C       .       PASS    AA=t;DP=114     GT:GQ:DP        1|1:44:23       0|1:29:12       1|0:100:78
+17     29038179        rs12451197      T       A       .       PASS    AA=T;DP=156     GT:GQ:DP        1|1:44:23       0|1:93:39       1|0:100:53
+8      18774098        rs7003060       T       G       .       PASS    AA=G;DP=96      GT:GQ:DP        1|1:44:24       1|1:28:16       1|1:100:56
+1      155039601       rs2644588       C       T       .       PASS    AA=C;DP=106;HM2 GT:GQ:DP        1|1:44:25       0|1:96:16       1|0:100:64
+10     135279171       rs4379787       T       C       .       PASS    AA=.;DP=134     GT:GQ:DP        1|1:44:25       1|1:38:22       1|1:100:87
+5      57593504        rs2910592       A       C       .       PASS    AA=C;DP=122     GT:GQ:DP        1|1:44:25       1|1:69:33       1|1:100:65
+7      36658656        rs4720209       T       A       .       PASS    AA=A;DP=111     GT:GQ:DP        1|1:44:26       0|1:100:20      1|0:100:51
+3      124903414       rs1817214       G       C       .       PASS    AA=C;DP=92      GT:GQ:DP        1|1:44:26       1|0:100:16      1|1:100:50
+4      139181235       rs1519326       A       T       .       PASS    AA=T;DP=118     GT:GQ:DP        1|1:44:26       1|0:100:20      1|1:100:70
+8      2657754 rs6558690       T       C       .       PASS    AA=T;DP=88      GT:GQ:DP        1|1:44:26       1|0:39:9        1|1:100:42
+4      84665525        rs56670138      G       C       .       PASS    AA=G;DP=136     GT:GQ:DP        1|1:44:27       0|0:84:29       1|0:100:81
+2      237532833       rs11694509      C       A       .       PASS    AA=C;DP=115     GT:GQ:DP        1|1:44:27       0|1:100:20      1|0:100:66
+2      157584308       .       A       C       .       PASS    AA=C;DP=117     GT:GQ:DP        1|1:44:27       0|1:100:20      1|0:100:69
+2      165704353       rs1946892       T       A       .       PASS    AA=A;DP=112     GT:GQ:DP        1|1:44:27       0|1:100:21      1|0:100:62
+4      169008063       rs9312225       A       G       .       PASS    AA=G;DP=130     GT:GQ:DP        1|1:44:27       0|1:100:27      1|0:100:76
+4      190077365       rs7668216       G       T       .       PASS    AA=T;DP=102     GT:GQ:DP        1|1:44:27       0|1:74:28       1|0:100:47
+4      165785381       rs13435081      C       A       .       PASS    AA=C;DP=108     GT:GQ:DP        1|1:44:27       0|1:79:16       1|0:100:69
+11     30835619        .       T       C       .       PASS    AA=C;DP=81      GT:GQ:DP        1|1:44:27       1|1:41:12       1|1:100:34
+6      39198502        rs183465        C       T       .       PASS    AA=C;DP=108     GT:GQ:DP        1|1:44:31       0|1:100:21      1|0:100:55
+16     85776553        rs11864957      C       T       .       PASS    AA=C;DP=119     GT:GQ:DP        1|1:44:31       0|1:67:15       1|0:100:74
+8      82406667        .       C       T       .       PASS    AA=c;DP=112     GT:GQ:DP        1|1:44:34       0|0:87:29       1|0:100:51
+X      118762138       rs6603552       T       C       .       PASS    AA=T;DP=98      GT:GQ:DP        1|1:45:15       1|0:100:15      1|1:91:37
+8      112218347       rs12543901      G       A       .       PASS    AA=g;DP=71      GT:GQ:DP        1|1:45:15       1|0:100:18      1|1:75:38
+6      10688280        rs594329        C       T       .       PASS    AA=T;DP=86      GT:GQ:DP        1|1:45:15       1|0:100:21      1|1:100:51
+3      96656411        rs12490355      A       G       .       PASS    AA=A;DP=80      GT:GQ:DP        1|1:45:15       1|0:100:21      1|1:99:33
+20     52728754        rs17000018      G       A       .       PASS    AA=G;DP=85      GT:GQ:DP        1|1:45:15       1|0:100:22      1|1:96:49
+8      134963238       rs28408711      G       T       .       PASS    AA=G;DP=95      GT:GQ:DP        1|1:45:15       1|0:100:26      1|1:100:56
+9      31214271        rs10970217      A       G       .       PASS    AA=A;DP=67      GT:GQ:DP        1|1:45:15       1|0:100:27      1|1:66:22
+X      99571424        rs5967135       T       C       .       PASS    AA=N;DP=113     GT:GQ:DP        1|1:45:15       1|0:100:38      1|1:99:34
+X      9531393 rs3752627       A       G       .       PASS    AA=G;DP=126     GT:GQ:DP        1|1:45:15       1|0:100:39      1|1:100:37
+1      6304793 rs3789489       A       G       .       PASS    AA=G;DP=81;HM3  GT:GQ:DP        1|1:45:15       1|0:36:7        1|1:100:56
+5      67912942        rs853510        C       T       .       PASS    AA=T;DP=79      GT:GQ:DP        1|1:45:15       1|0:57:19       1|1:100:46
+X      48715039        rs3027480       A       G       .       PASS    AA=a;DP=104     GT:GQ:DP        1|1:45:15       1|0:65:22       1|1:100:43
+X      29005886        rs12557212      G       A       .       PASS    AA=G;DP=92      GT:GQ:DP        1|1:45:15       1|0:72:17       1|1:100:37
+1      95841438        rs1703804       G       A       .       PASS    AA=A;DP=69;HM2  GT:GQ:DP        1|1:45:15       1|0:85:16       1|1:87:29
+4      32062865        rs6854597       A       C       .       PASS    AA=N;DP=67      GT:GQ:DP        1|1:45:15       1|0:91:12       1|1:81:27
+21     31203459        rs2833154       A       C       .       PASS    AA=A;DP=76      GT:GQ:DP        1|1:45:15       1|0:93:14       1|1:100:51
+18     36806401        rs2313685       G       A       .       PASS    AA=A;DP=61      GT:GQ:DP        1|1:45:15       1|0:96:10       1|1:87:29
+X      71095781        rs6525552       T       C       .       PASS    AA=T;DP=80      GT:GQ:DP        1|1:45:15       1|0:97:20       1|1:96:32
+3      104794409       rs11709935      A       G       .       PASS    AA=A;DP=69      GT:GQ:DP        1|1:45:15       1|0:98:13       1|1:78:27
+8      13504239        rs7461524       G       A       .       PASS    AA=A;DP=71      GT:GQ:DP        1|1:45:16       0|1:100:17      1|0:100:26
+4      152446219       rs6535786       C       T       .       PASS    AA=T;DP=77      GT:GQ:DP        1|1:45:16       0|1:100:17      1|0:100:41
+X      58270215        .       C       T       .       PASS    AA=.;DP=91      GT:GQ:DP        1|1:45:16       0|1:100:21      1|0:100:36
+11     24540419        rs7936313       A       G       .       PASS    AA=a;DP=91      GT:GQ:DP        1|1:45:16       0|1:100:22      1|0:100:52
+X      56541439        rs5913950       C       T       .       PASS    AA=C;DP=107     GT:GQ:DP        1|1:45:16       0|1:100:27      1|0:100:32
+1      187467186       rs4529708       C       T       .       PASS    AA=T;DP=88;HM2;HM3      GT:GQ:DP        1|1:45:16       0|1:51:15       1|0:100:60
+8      28476995        rs13265312      G       A       .       PASS    AA=G;DP=88      GT:GQ:DP        1|1:45:16       0|1:53:18       1|0:100:54
+10     134726289       rs11101703      G       A       .       PASS    AA=A;DP=65      GT:GQ:DP        1|1:45:16       0|1:61:11       1|0:100:35
+4      159709308       rs6839372       C       G       .       PASS    AA=G;DP=78      GT:GQ:DP        1|1:45:16       0|1:65:13       1|0:100:49
+5      161551111       rs210995        C       T       .       PASS    AA=C;DP=90      GT:GQ:DP        1|1:45:16       0|1:77:14       1|0:100:54
+4      109588584       rs11936528      C       T       .       PASS    AA=T;DP=88      GT:GQ:DP        1|1:45:16       0|1:83:16       1|0:100:56
+14     26909713        rs1456791       A       G       .       PASS    AA=A;DP=77      GT:GQ:DP        1|1:45:16       0|1:87:22       1|0:100:39
+2      145871841       rs6745444       A       G       .       PASS    AA=A;DP=69      GT:GQ:DP        1|1:45:16       0|1:90:19       1|0:100:32
+7      13638948        .       C       T       .       PASS    AA=C;DP=95      GT:GQ:DP        1|1:45:16       0|1:91:25       1|0:100:41
+X      150534758       rs4828629       T       A       .       PASS    AA=T;DP=92      GT:GQ:DP        1|1:45:16       0|1:92:18       1|0:100:33
+X      135024008       rs5975676       T       A       .       PASS    AA=A;DP=112     GT:GQ:DP        1|1:45:16       0|1:93:11       1|0:100:47
+4      114233508       rs10016484      A       G       .       PASS    AA=A;DP=64      GT:GQ:DP        1|1:45:16       1|0:100:12      1|1:72:24
+9      75684766        rs12004848      C       T       .       PASS    AA=T;DP=73      GT:GQ:DP        1|1:45:16       1|0:100:22      1|1:66:23
+X      138315871       .       A       G       .       PASS    AA=a;DP=123     GT:GQ:DP        1|1:45:16       1|0:100:28      1|1:100:40
+21     22285896        rs2827193       G       A       .       PASS    AA=A;DP=87      GT:GQ:DP        1|1:45:16       1|0:15:13       1|1:100:58
+13     61684079        rs34665737      C       T       .       PASS    AA=c;DP=65      GT:GQ:DP        1|1:45:16       1|0:52:18       1|1:52:26
+4      151594606       rs2884894       G       C       .       PASS    AA=C;DP=81      GT:GQ:DP        1|1:45:16       1|0:71:21       1|1:100:43
+X      17817368        .       G       C       .       PASS    AA=C;DP=94      GT:GQ:DP        1|1:45:16       1|0:72:20       1|1:84:28
+12     128106308       rs501042        T       G       .       PASS    AA=G;DP=82      GT:GQ:DP        1|1:45:16       1|1:38:12       1|1:100:57
+15     27548541        rs11073039      C       T       .       PASS    AA=T;DP=81      GT:GQ:DP        1|1:45:16       1|1:56:17       1|1:100:46
+18     27678287        rs9966530       A       G       .       PASS    AA=G;DP=99      GT:GQ:DP        1|1:45:16       1|1:62:19       1|1:100:61
+7      84833909        rs6949147       G       A       .       PASS    AA=G;DP=89      GT:GQ:DP        1|1:45:17       0|1:100:16      1|0:100:55
+6      102519782       rs1223043       A       G       .       PASS    AA=G;DP=104     GT:GQ:DP        1|1:45:17       0|1:100:22      1|0:100:66
+3      132362641       rs2718869       T       C       .       PASS    AA=C;DP=81      GT:GQ:DP        1|1:45:17       0|1:18:11       1|0:100:43
+X      140773275       rs12689545      A       G       .       PASS    AA=A;DP=134     GT:GQ:DP        1|1:45:17       0|1:65:28       1|0:100:40
+X      36584056        rs7061286       T       C       .       PASS    AA=T;DP=83      GT:GQ:DP        1|1:45:18       0|1:100:23      1|0:100:25
+11     134396138       .       C       T       .       PASS    AA=c;DP=102     GT:GQ:DP        1|1:45:18       0|1:100:31      1|0:100:53
+X      34203356        rs5927256       G       A       .       PASS    AA=G;DP=104     GT:GQ:DP        1|1:45:18       0|1:73:23       1|0:100:35
+1      83010914        rs2163979       C       G       .       PASS    AA=G;DP=103;HM2 GT:GQ:DP        1|1:45:18       1|0:100:27      1|1:100:57
+10     134927010       rs2275722       C       T       .       PASS    AA=c;DP=112     GT:GQ:DP        1|1:45:18       1|1:32:18       1|1:100:74
+1      109617699       rs441853        A       C       .       PASS    AA=C;DP=52      GT:GQ:DP        1|1:45:19       1|1:13:8        1|1:70:22
+6      54443053        rs243770        T       G       .       PASS    AA=G;DP=108     GT:GQ:DP        1|1:45:19       1|1:68:21       1|1:100:69
+4      57861369        rs2412800       C       T       .       PASS    AA=c;DP=67      GT:GQ:DP        1|1:45:19       1|1:7:12        1|1:100:32
+17     76873382        rs8077394       A       G       .       PASS    AA=a;DP=84      GT:GQ:DP        1|1:45:20       1|1:20:6        1|1:100:59
+4      2294506 rs654726        A       T       .       PASS    AA=T;DP=103     GT:GQ:DP        1|1:45:20       1|1:29:19       1|1:100:66
+4      138631503       rs9799501       A       G       .       PASS    AA=a;DP=103     GT:GQ:DP        1|1:45:20       1|1:49:25       1|1:100:55
+8      116328512       rs4242564       T       C       .       PASS    AA=C;DP=101     GT:GQ:DP        1|1:45:20       1|1:68:22       1|1:100:62
+5      40256884        rs350069        T       C       .       PASS    AA=C;DP=142     GT:GQ:DP        1|1:45:21       1|1:100:35      1|1:100:91
+1      9016500 rs6691104       G       C       .       PASS    AA=C;DP=74      GT:GQ:DP        1|1:45:21       1|1:41:12       1|1:100:41
+2      240758420       rs4853996       C       T       .       PASS    AA=T;DP=114     GT:GQ:DP        1|1:45:21       1|1:41:12       1|1:100:80
+10     122097154       rs10886667      C       G       .       PASS    AA=G;DP=93      GT:GQ:DP        1|1:45:21       1|1:47:15       1|1:100:59
+2      98124193        rs34473451      G       T       .       PASS    AA=G;DP=119     GT:GQ:DP        1|1:45:22       0|1:100:20      1|0:100:78
+11     121156140       rs7124703       T       C       .       PASS    AA=C;DP=120     GT:GQ:DP        1|1:45:22       0|1:100:22      1|0:100:76
+1      30389802        rs10737383      C       T       .       PASS    AA=T;DP=117;HM2 GT:GQ:DP        1|1:45:22       0|1:100:23      1|0:100:74
+7      81213880        rs6467870       T       G       .       PASS    AA=T;DP=84      GT:GQ:DP        1|1:45:22       1|1:40:17       1|1:100:41
+8      128432834       rs10097200      T       C       .       PASS    AA=C;DP=85      GT:GQ:DP        1|1:45:24       0|1:67:14       1|0:100:47
+9      127475077       rs638168        G       A       .       PASS    AA=G;DP=122     GT:GQ:DP        1|1:45:25       0|1:100:32      1|0:100:65
+8      131723491       rs4446756       T       C       .       PASS    AA=C;DP=113     GT:GQ:DP        1|1:45:25       1|0:100:29      1|1:100:49
+1      246491219       rs6695468       G       A       .       PASS    AA=A;DP=104     GT:GQ:DP        1|1:45:25       1|0:77:17       1|1:100:54
+8      91982744        rs2740802       T       C       .       PASS    AA=C;DP=97      GT:GQ:DP        1|1:45:25       1|1:29:19       1|1:100:42
+7      52998954        rs11761819      G       A       .       PASS    AA=G;DP=125     GT:GQ:DP        1|1:45:26       0|0:60:21       1|0:100:80
+19     59277216        rs166209        T       C       .       PASS    AA=C;DP=92      GT:GQ:DP        1|1:45:26       1|1:32:22       1|1:100:36
+7      146033845       rs344448        A       C       .       PASS    AA=C;DP=104     GT:GQ:DP        1|1:45:26       1|1:67:28       1|1:100:42
+7      4042218 rs7791174       G       T       .       PASS    AA=T;DP=96      GT:GQ:DP        1|1:45:27       1|1:74:23       1|1:100:48
+2      11715597        .       G       T       .       PASS    AA=G;DP=135     GT:GQ:DP        1|1:45:28       0|0:35:20       1|0:100:87
+14     33021656        rs10150715      C       A       .       PASS    AA=-;DP=107     GT:GQ:DP        1|1:45:28       0|0:51:17       1|0:100:44
+14     97421043        rs1379227       T       C       .       PASS    AA=T;DP=113     GT:GQ:DP        1|1:45:28       0|0:69:28       1|0:100:58
+12     132269467       rs11147284      T       G       .       PASS    AA=G;DP=159     GT:GQ:DP        1|1:45:28       0|0:8:35        1|0:100:53
+2      31095424        rs13009779      C       T       .       PASS    AA=C;DP=125     GT:GQ:DP        1|1:45:28       1|1:71:23       1|1:100:77
+5      1196466 rs7379082       C       A       .       PASS    AA=N;DP=121     GT:GQ:DP        1|1:45:29       0|1:46:16       1|0:100:76
+12     4210338 rs4391882       T       A       .       PASS    AA=A;DP=107     GT:GQ:DP        1|1:45:29       1|1:68:21       1|1:100:57
+12     129594705       rs10744465      C       T       .       PASS    AA=T;DP=147     GT:GQ:DP        1|1:45:30       1|0:78:25       1|1:100:96
+17     50402136        rs9915183       G       A       .       PASS    AA=G;DP=126     GT:GQ:DP        1|1:45:32       0|0:63:21       1|0:100:76
+4      58524918        rs7689399       G       C       .       PASS    AA=g;DP=113     GT:GQ:DP        1|1:45:38       0|1:52:16       1|0:100:59
+19     12509722        rs4804717       T       C       .       PASS    AA=C;DP=84      GT:GQ:DP        1|1:46:14       1|1:13:12       1|1:100:58
+8      115416465       rs1553036       A       T       .       PASS    AA=A;DP=62      GT:GQ:DP        1|1:46:14       1|1:16:14       1|1:32:24
+10     66130141        rs4746462       G       A       .       PASS    AA=A;DP=56      GT:GQ:DP        1|1:46:15       1|1:14:13       1|1:86:24
+X      37592084        .       G       A       .       PASS    AA=G;DP=135     GT:GQ:DP        1|1:46:17       0|0:100:36      1|0:100:44
+13     80985511        rs9601627       A       C       .       PASS    AA=A;DP=67      GT:GQ:DP        1|1:46:17       0|0:33:11       1|0:100:37
+10     4220356 rs7068592       A       C       .       PASS    AA=A;DP=82      GT:GQ:DP        1|1:46:17       0|0:33:12       1|0:100:45
+15     44526050        rs16955077      A       T       .       PASS    AA=A;DP=73      GT:GQ:DP        1|1:46:17       0|0:36:13       1|0:100:43
+12     72199891        rs10879626      A       G       .       PASS    AA=A;DP=102     GT:GQ:DP        1|1:46:17       0|0:36:14       1|0:100:65
+16     24348330        rs7206811       A       G       .       PASS    AA=A;DP=62      GT:GQ:DP        1|1:46:17       0|0:42:14       1|0:100:31
+X      94321524        rs6615702       G       A       .       PASS    AA=.;DP=97      GT:GQ:DP        1|1:46:17       0|0:42:16       1|0:100:29
+X      111975780       rs657881        C       G       .       PASS    AA=C;DP=110     GT:GQ:DP        1|1:46:17       0|0:42:17       1|0:100:39
+13     83883848        rs1330510       A       T       .       PASS    AA=T;DP=70      GT:GQ:DP        1|1:46:17       0|0:42:20       1|0:100:26
+21     23493526        rs9305168       C       T       .       PASS    AA=T;DP=79      GT:GQ:DP        1|1:46:17       0|0:47:27       1|0:100:26
+X      43087138        .       C       T       .       PASS    AA=C;DP=71      GT:GQ:DP        1|1:46:17       0|0:48:16       1|0:100:23
+11     97189097        rs10789690      T       C       .       PASS    AA=T;DP=83      GT:GQ:DP        1|1:46:17       0|0:48:16       1|0:100:35
+13     54467539        rs969565        C       T       .       PASS    AA=T;DP=99      GT:GQ:DP        1|1:46:17       0|0:48:17       1|0:100:67
+18     14452810        rs11080764      G       C       .       PASS    AA=C;DP=84      GT:GQ:DP        1|1:46:17       0|0:51:17       1|0:100:49
+X      145351976       rs1884453       A       T       .       PASS    AA=A;DP=110     GT:GQ:DP        1|1:46:17       0|0:51:23       1|0:100:32
+1      71751685        rs61454751      T       G       .       PASS    AA=T;DP=65      GT:GQ:DP        1|1:46:17       0|0:54:18       1|0:100:16
+13     27164363        rs4769563       G       A       .       PASS    AA=A;DP=104     GT:GQ:DP        1|1:46:17       0|0:54:18       1|0:100:31
+10     67485933        rs2169666       T       C       .       PASS    AA=T;DP=98      GT:GQ:DP        1|1:46:17       0|0:54:18       1|0:100:65
+4      824308  rs4690322       A       G       .       PASS    AA=A;DP=95      GT:GQ:DP        1|1:46:17       0|0:57:19       1|0:100:58
+18     14900409        rs786009        G       A       .       PASS    AA=.;DP=82      GT:GQ:DP        1|1:46:17       0|0:57:20       1|0:100:35
+14     97555573        rs10138885      A       G       .       PASS    AA=G;DP=99      GT:GQ:DP        1|1:46:17       0|0:57:20       1|0:100:61
+1      189400527       rs1454355       G       A       .       PASS    AA=G;DP=90      GT:GQ:DP        1|1:46:17       0|0:63:21       1|0:100:41
+4      29639436        rs4624624       G       A       .       PASS    AA=G;DP=90      GT:GQ:DP        1|1:46:17       0|0:63:21       1|0:100:51
+7      125166906       rs10225570      T       C       .       PASS    AA=T;DP=105     GT:GQ:DP        1|1:46:17       0|0:63:21       1|0:100:67
+8      37374992        rs2541440       G       C       .       PASS    AA=G;DP=97      GT:GQ:DP        1|1:46:17       0|0:66:22       1|0:100:60
+19     62666793        rs7248386       T       C       .       PASS    AA=T;DP=76      GT:GQ:DP        1|1:46:17       0|0:72:24       1|0:100:25
+2      188948669       rs59329932      A       C       .       PASS    AA=A;DP=93      GT:GQ:DP        1|1:46:17       0|0:72:24       1|0:100:52
+2      228230254       rs7599678       G       A       .       PASS    AA=G;DP=121     GT:GQ:DP        1|1:46:17       0|0:82:33       1|0:100:73
+1      82827345        rs17108557      T       G       .       PASS    AA=T;DP=109;HM2 GT:GQ:DP        1|1:46:17       0|0:84:28       1|0:100:64
+21     14574944        rs57450436      T       A       .       PASS    AA=T;DP=104     GT:GQ:DP        1|1:46:17       0|0:90:38       1|0:100:50
+13     87784170        rs897402        A       G       .       PASS    AA=G;DP=105     GT:GQ:DP        1|1:46:17       0|0:96:32       1|0:100:52
+5      52267241        rs10075277      T       C       .       PASS    AA=T;DP=118     GT:GQ:DP        1|1:46:17       0|0:99:33       1|0:100:69
+5      115335772       rs6594923       T       C       .       PASS    AA=T;DP=82      GT:GQ:DP        1|1:46:17       1|1:71:22       1|1:100:44
+7      65784545        rs3800823       C       A       .       PASS    AA=c;DP=59      GT:GQ:DP        1|1:46:18       0|0:21:7        1|0:100:30
+4      74876559        rs55935907      A       G       .       PASS    AA=A;DP=76      GT:GQ:DP        1|1:46:18       0|0:33:11       1|0:100:46
+4      118004437       rs1392765       A       G       .       PASS    AA=A;DP=80      GT:GQ:DP        1|1:46:18       0|0:45:15       1|0:100:47
+6      154012855       rs4283899       T       A       .       PASS    AA=T;DP=84      GT:GQ:DP        1|1:46:18       0|0:48:16       1|0:100:49
+13     92551293        rs61434880      G       A       .       PASS    AA=A;DP=98      GT:GQ:DP        1|1:46:18       0|0:72:24       1|0:100:50
+9      110415074       rs4978358       G       A       .       PASS    AA=G;DP=112     GT:GQ:DP        1|1:46:18       0|0:75:27       1|0:100:69
+12     126426311       rs56211198      T       C       .       PASS    AA=T;DP=97      GT:GQ:DP        1|1:46:18       0|0:78:26       1|0:100:54
+X      11935476        .       T       A       .       PASS    AA=t;DP=130     GT:GQ:DP        1|1:46:18       0|0:81:28       1|0:100:50
+X      23475233        rs7887622       T       C       .       PASS    AA=T;DP=123     GT:GQ:DP        1|1:46:18       0|0:87:31       1|0:100:36
+X      11372313        rs5933885       C       T       .       PASS    AA=T;DP=91      GT:GQ:DP        1|1:46:18       1|1:77:27       1|1:100:29
+14     62275595        rs7157416       A       G       .       PASS    AA=A;DP=76      GT:GQ:DP        1|1:46:19       0|0:57:19       1|0:100:30
+8      20839826        rs28699174      T       C       .       PASS    AA=C;DP=100     GT:GQ:DP        1|1:46:19       0|0:66:22       1|0:100:58
+8      15970149        rs2628279       A       G       .       PASS    AA=A;DP=129     GT:GQ:DP        1|1:46:19       0|0:92:33       1|0:100:77
+14     104319515       rs2498791       G       T       .       PASS    AA=T;DP=61      GT:GQ:DP        1|1:46:19       1|1:26:8        1|1:83:27
+6      31340676        rs9264493       A       G       .       PASS    AA=N;DP=69      GT:GQ:DP        1|1:46:19       1|1:38:11       1|1:100:31
+8      39402192        rs7830777       C       T       .       PASS    AA=T;DP=76      GT:GQ:DP        1|1:46:19       1|1:38:12       1|1:100:31
+15     23016156        rs2739793       A       G       .       PASS    AA=A;DP=116     GT:GQ:DP        1|1:46:19       1|1:62:19       1|1:100:66
+19     55122091        rs184008        A       G       .       PASS    AA=G;DP=79      GT:GQ:DP        1|1:46:21       1|1:38:17       1|1:95:40
+2      154485539       rs7568393       G       A       .       PASS    AA=A;DP=92      GT:GQ:DP        1|1:46:22       0|1:17:14       1|0:100:58
+2      73053384        .       C       T       .       PASS    AA=C;DP=104     GT:GQ:DP        1|1:46:23       0|0:39:14       1|0:100:67
+12     94418207        .       T       C       .       PASS    AA=T;DP=107     GT:GQ:DP        1|1:46:23       0|0:72:24       1|0:100:63
+19     18119459        rs1566030       A       G       .       PASS    AA=G;DP=79      GT:GQ:DP        1|1:46:23       1|1:21:10       1|1:100:40
+12     41994866        rs10785427      T       C       .       PASS    AA=C;DP=84      GT:GQ:DP        1|1:46:23       1|1:24:18       1|1:92:35
+2      125923334       rs10192820      A       G       .       PASS    AA=A;DP=97      GT:GQ:DP        1|1:46:23       1|1:77:24       1|1:100:43
+12     76101233        rs1851095       A       G       .       PASS    AA=G;DP=113     GT:GQ:DP        1|1:46:23       1|1:80:26       1|1:100:51
+8      42670476        rs6985052       C       T       .       PASS    AA=C;DP=109     GT:GQ:DP        1|1:46:24       0|0:36:12       1|0:100:73
+4      154799066       rs2405437       G       T       .       PASS    AA=T;DP=102     GT:GQ:DP        1|1:46:25       1|1:18:14       1|1:100:57
+5      5401231 rs2964466       G       A       .       PASS    AA=G;DP=91      GT:GQ:DP        1|1:46:25       1|1:38:14       1|1:100:46
+18     45414951        rs7241918       G       T       .       PASS    AA=T;DP=100     GT:GQ:DP        1|1:46:25       1|1:38:22       1|1:100:40
+11     15673534        rs4756822       G       T       .       PASS    AA=T;DP=129     GT:GQ:DP        1|1:46:25       1|1:43:24       1|1:100:79
+16     8660166 rs60815227      A       G       .       PASS    AA=a;DP=84      GT:GQ:DP        1|1:46:25       1|1:46:20       1|1:100:33
+2      3458039 rs10181773      A       G       .       PASS    AA=G;DP=98      GT:GQ:DP        1|1:46:25       1|1:47:15       1|1:100:59
+6      122748  rs4959127       T       C       .       PASS    AA=.;DP=106     GT:GQ:DP        1|1:46:25       1|1:56:18       1|1:100:62
+8      68955117        rs4556082       A       G       .       PASS    AA=G;DP=99      GT:GQ:DP        1|1:46:25       1|1:59:19       1|1:100:53
+14     44340595        rs229746        A       T       .       PASS    AA=T;DP=122     GT:GQ:DP        1|1:46:25       1|1:60:30       1|1:100:63
+13     91279565        rs2989988       C       T       .       PASS    AA=T;DP=98      GT:GQ:DP        1|1:46:25       1|1:65:21       1|1:100:53
+1      244315811       rs2787987       A       G       .       PASS    AA=G;DP=102     GT:GQ:DP        1|1:46:25       1|1:65:21       1|1:100:55
+2      120082074       rs6750770       C       A       .       PASS    AA=A;DP=107     GT:GQ:DP        1|1:46:25       1|1:71:22       1|1:100:59
+5      61483568        rs2910476       T       C       .       PASS    AA=C;DP=122     GT:GQ:DP        1|1:46:25       1|1:71:23       1|1:100:76
+21     27278698        rs1497273       T       C       .       PASS    AA=C;DP=108     GT:GQ:DP        1|1:46:25       1|1:74:24       1|1:100:60
+16     45699725        rs2160479       T       A       .       PASS    AA=a;DP=91      GT:GQ:DP        1|1:46:25       1|1:77:25       1|1:100:42
+9      114295795       rs7865240       T       C       .       PASS    AA=T;DP=122     GT:GQ:DP        1|1:46:25       1|1:77:26       1|1:100:69
+22     41394801        rs135095        T       C       .       PASS    AA=C;DP=121     GT:GQ:DP        1|1:46:26       1|1:58:29       1|1:100:68
+5      1064149 rs6869901       G       A       .       PASS    AA=G;DP=129     GT:GQ:DP        1|1:46:27       0|0:60:20       1|0:100:83
+14     85471977        rs1953779       G       A       .       PASS    AA=G;DP=96      GT:GQ:DP        1|1:46:27       1|0:88:20       1|1:85:46
+3      107448127       rs1550765       A       G       .       PASS    AA=G;DP=123     GT:GQ:DP        1|1:46:28       0|0:51:17       1|0:100:72
+5      144472311       rs6421156       T       G       .       PASS    AA=G;DP=120     GT:GQ:DP        1|1:46:29       1|1:80:25       1|1:100:69
+11     131486002       rs12575520      A       C       .       PASS    AA=A;DP=104     GT:GQ:DP        1|1:46:31       0|0:69:24       1|0:100:42
+2      167971892       .       A       C       .       PASS    AA=A;DP=114     GT:GQ:DP        1|1:46:31       0|0:78:26       1|0:100:55
+8      28352976        rs13277890      C       T       .       PASS    AA=C;DP=119     GT:GQ:DP        1|1:46:34       0|0:63:22       1|0:100:63
+8      20706614        rs968219        G       C       .       PASS    AA=C;DP=74      GT:GQ:DP        1|1:47:14       1|1:16:14       1|1:100:43
+3      62704974        rs564720        A       G       .       PASS    AA=G;DP=82      GT:GQ:DP        1|1:47:14       1|1:21:13       1|1:79:54
+6      93710379        rs1572630       A       T       .       PASS    AA=T;DP=75      GT:GQ:DP        1|1:47:14       1|1:21:16       1|1:100:39
+4      182603645       rs11736494      C       G       .       PASS    AA=G;DP=76      GT:GQ:DP        1|1:47:14       1|1:23:18       1|1:100:40
+14     76925446        rs10140302      C       A       .       PASS    AA=C;DP=87      GT:GQ:DP        1|1:47:14       1|1:24:17       1|1:66:53
+17     65792602        rs236537        A       T       .       PASS    AA=T;DP=78      GT:GQ:DP        1|1:47:14       1|1:25:17       1|1:100:47
+19     56831855        rs7248821       C       A       .       PASS    AA=A;DP=88      GT:GQ:DP        1|1:47:14       1|1:27:18       1|1:100:59
+X      145664559       rs5965787       G       T       .       PASS    AA=T;DP=90      GT:GQ:DP        1|1:47:14       1|1:29:19       1|1:100:33
+2      95151537        rs3112227       T       G       .       PASS    AA=G;DP=56      GT:GQ:DP        1|1:47:14       1|1:32:10       1|1:82:28
+4      76868948        rs2280095       C       G       .       PASS    AA=G;DP=66      GT:GQ:DP        1|1:47:14       1|1:32:9        1|1:100:38
+13     59061875        rs628126        T       C       .       PASS    AA=T;DP=79      GT:GQ:DP        1|1:47:14       1|1:35:10       1|1:100:56
+13     37040730        rs4943522       G       A       .       PASS    AA=A;DP=71      GT:GQ:DP        1|1:47:14       1|1:35:16       1|1:100:27
+1      19161714        rs28441270      C       T       .       PASS    AA=C;DP=76      GT:GQ:DP        1|1:47:14       1|1:38:11       1|1:100:51
+X      14253518        rs1468160       T       C       .       PASS    AA=C;DP=77      GT:GQ:DP        1|1:47:14       1|1:42:15       1|1:92:29
+4      31300943        rs7666310       G       A       .       PASS    AA=G;DP=69      GT:GQ:DP        1|1:47:14       1|1:47:14       1|1:100:42
+18     46347194        rs2969967       A       G       .       PASS    AA=G;DP=77      GT:GQ:DP        1|1:47:14       1|1:47:14       1|1:100:48
+13     81631911        rs7336834       C       T       .       PASS    AA=T;DP=75      GT:GQ:DP        1|1:47:14       1|1:47:14       1|1:100:50
+3      133938606       rs6767632       A       G       .       PASS    AA=G;DP=86      GT:GQ:DP        1|1:47:14       1|1:47:14       1|1:100:59
+6      67701238        rs4710642       T       C       .       PASS    AA=A;DP=69      GT:GQ:DP        1|1:47:14       1|1:47:16       1|1:100:27
+3      21063882        rs9881998       C       T       .       PASS    AA=t;DP=71      GT:GQ:DP        1|1:47:14       1|1:50:15       1|1:100:30
+19     34654857        rs8101026       C       T       .       PASS    AA=T;DP=80      GT:GQ:DP        1|1:47:14       1|1:50:15       1|1:100:52
+X      76509639        rs28757805      A       G       .       PASS    AA=G;DP=89      GT:GQ:DP        1|1:47:14       1|1:50:16       1|1:100:25
+19     46169144        rs56317391      A       G       .       PASS    AA=G;DP=77      GT:GQ:DP        1|1:47:14       1|1:50:16       1|1:100:37
+7      85438797        rs7781135       T       G       .       PASS    AA=G;DP=82      GT:GQ:DP        1|1:47:14       1|1:50:16       1|1:100:50
+15     93820844        rs1966525       T       C       .       PASS    AA=C;DP=84      GT:GQ:DP        1|1:47:14       1|1:50:19       1|1:100:51
+X      44403739        rs5905847       G       A       .       PASS    AA=G;DP=83      GT:GQ:DP        1|1:47:14       1|1:53:16       1|1:100:26
+3      82386994        rs6790985       G       A       .       PASS    AA=A;DP=72      GT:GQ:DP        1|1:47:14       1|1:53:16       1|1:100:40
+1      170082054       rs10798701      G       A       .       PASS    AA=A;DP=80      GT:GQ:DP        1|1:47:14       1|1:53:16       1|1:100:50
+X      13781338        rs2889001       A       C       .       PASS    AA=C;DP=109     GT:GQ:DP        1|1:47:14       1|1:53:21       1|1:100:40
+8      113156697       rs4501608       G       T       .       PASS    AA=T;DP=74      GT:GQ:DP        1|1:47:14       1|1:55:28       1|1:100:32
+12     85910084        rs55818208      T       G       .       PASS    AA=G;DP=62      GT:GQ:DP        1|1:47:14       1|1:56:17       1|1:100:23
+3      138112014       rs2343661       T       C       .       PASS    AA=C;DP=76      GT:GQ:DP        1|1:47:14       1|1:56:17       1|1:100:46
+14     21160945        rs2049786       A       C       .       PASS    AA=C;DP=85      GT:GQ:DP        1|1:47:14       1|1:56:17       1|1:100:55
+X      44166181        rs995356        G       A       .       PASS    AA=A;DP=88      GT:GQ:DP        1|1:47:14       1|1:56:18       1|1:100:26
+1      106239154       rs2610926       G       C       .       PASS    AA=C;DP=79;HM2  GT:GQ:DP        1|1:47:14       1|1:56:18       1|1:100:43
+11     87235988        rs1939177       G       A       .       PASS    AA=a;DP=76      GT:GQ:DP        1|1:47:14       1|1:56:23       1|1:100:38
+X      109763086       rs5985520       C       T       .       PASS    AA=T;DP=80      GT:GQ:DP        1|1:47:14       1|1:59:18       1|1:100:28
+5      110488750       rs7702774       G       T       .       PASS    AA=T;DP=74      GT:GQ:DP        1|1:47:14       1|1:59:18       1|1:100:42
+X      54492874        rs12011120      A       G       .       PASS    AA=G;DP=104     GT:GQ:DP        1|1:47:14       1|1:59:19       1|1:100:40
+4      156492069       rs6829263       G       T       .       PASS    AA=T;DP=68      GT:GQ:DP        1|1:47:14       1|1:59:21       1|1:100:29
+5      89779637        rs2162987       C       T       .       PASS    AA=T;DP=82      GT:GQ:DP        1|1:47:14       1|1:62:19       1|1:100:52
+X      4707429 rs5915799       T       C       .       PASS    AA=N;DP=110     GT:GQ:DP        1|1:47:14       1|1:62:22       1|1:100:48
+X      145840435       rs6626816       A       T       .       PASS    AA=A;DP=82      GT:GQ:DP        1|1:47:14       1|1:65:20       1|1:100:31
+13     104911245       rs1935060       C       T       .       PASS    AA=C;DP=77      GT:GQ:DP        1|1:47:14       1|1:65:20       1|1:100:32
+1      91500790        rs555432        T       C       .       PASS    AA=C;DP=89;HM2  GT:GQ:DP        1|1:47:14       1|1:65:20       1|1:100:55
+1      90006480        rs512132        T       G       .       PASS    AA=T;DP=82;HM2  GT:GQ:DP        1|1:47:14       1|1:65:21       1|1:100:35
+X      83390987        rs765076        C       T       .       PASS    AA=c;DP=102     GT:GQ:DP        1|1:47:14       1|1:68:21       1|1:100:32
+X      122256800       rs5956535       A       G       .       PASS    AA=G;DP=88      GT:GQ:DP        1|1:47:14       1|1:68:22       1|1:100:19
+5      119368167       rs8180410       G       A       .       PASS    AA=A;DP=87      GT:GQ:DP        1|1:47:14       1|1:71:22       1|1:100:55
+X      9149009 rs5934543       A       G       .       PASS    AA=G;DP=106     GT:GQ:DP        1|1:47:14       1|1:71:23       1|1:100:35
+X      43381224        rs3859959       C       T       .       PASS    AA=T;DP=129     GT:GQ:DP        1|1:47:14       1|1:71:23       1|1:100:51
+7      80188138        rs2222713       C       T       .       PASS    AA=T;DP=95      GT:GQ:DP        1|1:47:14       1|1:71:23       1|1:100:60
+X      35454536        rs5927418       A       G       .       PASS    AA=A;DP=94      GT:GQ:DP        1|1:47:14       1|1:71:30       1|1:100:22
+X      20270942        rs5950386       C       T       .       PASS    AA=T;DP=95      GT:GQ:DP        1|1:47:14       1|1:74:23       1|1:100:30
+3      174047110       rs924399        T       A       .       PASS    AA=A;DP=108     GT:GQ:DP        1|1:47:14       1|1:77:24       1|1:100:69
+X      4536525 rs4335291       T       C       .       PASS    AA=N;DP=97      GT:GQ:DP        1|1:47:14       1|1:80:25       1|1:100:40
+12     57505029        rs2372118       C       G       .       PASS    AA=C;DP=97      GT:GQ:DP        1|1:47:14       1|1:89:29       1|1:100:56
+X      148221919       rs5936259       G       T       .       PASS    AA=T;DP=121     GT:GQ:DP        1|1:47:14       1|1:92:31       1|1:100:39
+X      43762419        rs5906426       A       G       .       PASS    AA=G;DP=106     GT:GQ:DP        1|1:47:14       1|1:95:30       1|1:100:31
+21     17457726        rs3888330       C       G       .       PASS    AA=N;DP=73      GT:GQ:DP        1|1:47:15       1|1:35:11       1|1:100:46
+X      70352743        rs5980745       G       A       .       PASS    AA=g;DP=75      GT:GQ:DP        1|1:47:15       1|1:35:13       1|1:88:29
+4      32333033        rs6838985       C       T       .       PASS    AA=T;DP=70      GT:GQ:DP        1|1:47:15       1|1:44:14       1|1:100:42
+11     98578878        rs1551781       C       G       .       PASS    AA=G;DP=62      GT:GQ:DP        1|1:47:15       1|1:49:21       1|1:90:15
+3      165023981       rs34450625      C       G       .       PASS    AA=G;DP=89      GT:GQ:DP        1|1:47:15       1|1:56:17       1|1:100:53
+X      6687096 rs921332        C       T       .       PASS    AA=c;DP=111     GT:GQ:DP        1|1:47:15       1|1:58:23       1|1:100:44
+17     8595533 rs957588        G       A       .       PASS    AA=A;DP=77      GT:GQ:DP        1|1:47:15       1|1:62:19       1|1:100:43
+X      86265905        rs6653127       C       T       .       PASS    AA=N;DP=97      GT:GQ:DP        1|1:47:15       1|1:71:23       1|1:100:26
+7      93031377        rs10238108      T       A       .       PASS    AA=A;DP=100     GT:GQ:DP        1|1:47:15       1|1:77:24       1|1:100:47
+18     48101018        rs1216085       C       T       .       PASS    AA=T;DP=104     GT:GQ:DP        1|1:47:15       1|1:98:32       1|1:100:58
+6      34223598        rs1873245       T       C       .       PASS    AA=C;DP=71      GT:GQ:DP        1|1:47:17       1|1:28:13       1|1:100:40
+8      80598867        rs2029824       A       T       .       PASS    AA=T;DP=98      GT:GQ:DP        1|1:47:19       1|1:77:25       1|1:100:54
+9      12153506        rs6474686       A       G       .       PASS    AA=G;DP=81      GT:GQ:DP        1|1:47:20       1|1:38:13       1|1:100:47
+12     81759352        rs11115457      A       G       .       PASS    AA=G;DP=116     GT:GQ:DP        1|1:47:20       1|1:57:26       1|1:100:68
+21     39290999        rs7279754       A       C       .       PASS    AA=A;DP=115     GT:GQ:DP        1|1:47:20       1|1:62:19       1|1:100:78
+1      93531816        rs7540025       C       T       .       PASS    AA=T;DP=103     GT:GQ:DP        1|1:47:20       1|1:63:23       1|1:100:53
+16     61312925        rs4783775       T       G       .       PASS    AA=T;DP=84      GT:GQ:DP        1|1:47:22       1|1:18:15       1|1:67:35
+5      77582552        rs7726585       A       G       .       PASS    AA=G;DP=95      GT:GQ:DP        1|1:47:22       1|1:59:19       1|1:100:54
+18     32309449        rs1708704       G       A       .       PASS    AA=G;DP=126     GT:GQ:DP        1|1:47:23       0|1:100:22      1|0:100:77
+16     5559222 rs1911498       C       A       .       PASS    AA=A;DP=92      GT:GQ:DP        1|1:47:23       1|1:44:13       1|1:100:54
+1      14262724        rs10733143      A       G       .       PASS    AA=A;DP=136;HM2;HM3     GT:GQ:DP        1|1:47:24       0|0:66:23       1|0:100:45
+12     31966878        rs11051678      G       A       .       PASS    AA=G;DP=116     GT:GQ:DP        1|1:47:24       0|1:100:24      1|0:100:67
+13     59779085        rs4453364       A       C       .       PASS    AA=C;DP=124     GT:GQ:DP        1|1:47:24       0|1:100:24      1|0:100:77
+1      239522366       rs10737855      C       A       .       PASS    AA=C;DP=108;HM2 GT:GQ:DP        1|1:47:24       1|0:100:29      1|1:100:44
+8      3371573 rs6995540       G       T       .       PASS    AA=T;DP=113     GT:GQ:DP        1|1:47:25       0|0:51:23       1|0:100:65
+17     70303213        rs7221435       A       G       .       PASS    AA=A;DP=94      GT:GQ:DP        1|1:47:25       0|1:37:13       1|0:100:46
+9      96484797        rs6479563       T       C       .       PASS    AA=C;DP=98      GT:GQ:DP        1|1:47:26       1|0:100:24      1|1:77:46
+5      35822188        rs10079517      T       G       .       PASS    AA=G;DP=101     GT:GQ:DP        1|1:47:26       1|0:63:14       1|1:100:60
+2      50582899        rs13029604      A       G       .       PASS    AA=A;DP=96      GT:GQ:DP        1|1:47:27       0|0:54:18       1|0:100:52
+13     54751509        rs9527356       C       A       .       PASS    AA=C;DP=106     GT:GQ:DP        1|1:47:27       1|0:100:19      1|1:100:59
+17     26835529        rs58656472      T       A       .       PASS    AA=A;DP=88      GT:GQ:DP        1|1:47:27       1|0:100:22      1|1:81:27
+3      62752559        rs304215        A       G       .       PASS    AA=A;DP=141     GT:GQ:DP        1|1:47:27       1|0:100:32      1|1:100:80
+9      89223039        rs10780835      C       T       .       PASS    AA=C;DP=121     GT:GQ:DP        1|1:47:27       1|0:100:34      1|1:100:59
+12     117521518       rs1520781       G       A       .       PASS    AA=A;DP=90      GT:GQ:DP        1|1:47:27       1|0:95:24       1|1:71:30
+5      38404585        rs1366283       C       G       .       PASS    AA=G;DP=117     GT:GQ:DP        1|1:47:28       0|1:100:19      1|0:100:70
+20     16867889        rs2223572       C       T       .       PASS    AA=T;DP=127     GT:GQ:DP        1|1:47:28       0|1:100:21      1|0:100:81
+X      934441  rs5946676       C       T       .       PASS    AA=.;DP=88      GT:GQ:DP        1|1:47:28       0|1:100:29      1|0:100:31
+3      98499769        rs9871518       A       G       .       PASS    AA=A;DP=125     GT:GQ:DP        1|1:47:28       0|1:100:29      1|0:100:65
+17     72924897        rs7222532       G       C       .       PASS    AA=C;DP=142     GT:GQ:DP        1|1:47:28       0|1:100:37      1|0:100:78
+4      188072365       rs322425        C       T       .       PASS    AA=A;DP=120     GT:GQ:DP        1|1:47:28       0|1:85:26       1|0:100:66
+11     79369101        .       T       A       .       PASS    AA=T;DP=115     GT:GQ:DP        1|1:47:29       0|0:66:29       1|0:100:55
+14     19627853        rs4360850       A       C       .       PASS    AA=A;DP=112     GT:GQ:DP        1|1:47:29       1|0:100:24      1|1:100:61
+16     53346221        rs12923482      T       G       .       PASS    AA=T;DP=119     GT:GQ:DP        1|1:47:29       1|0:100:26      1|1:100:64
+1      41734270        rs2991348       G       T       .       PASS    AA=T;DP=126     GT:GQ:DP        1|1:47:32       1|1:65:20       1|1:100:75
+X      152352791       rs5945163       C       G       .       PASS    AA=G;DP=79      GT:GQ:DP        1|1:48:16       1|0:100:17      1|1:100:38
+13     85446873        rs7989790       G       A       .       PASS    AA=A;DP=91      GT:GQ:DP        1|1:48:16       1|0:100:17      1|1:100:46
+X      2556305 rs5939096       T       G       .       PASS    AA=.;DP=72      GT:GQ:DP        1|1:48:16       1|0:100:22      1|1:78:28
+X      26878649        rs5971192       A       G       .       PASS    AA=G;DP=102     GT:GQ:DP        1|1:48:16       1|0:100:23      1|1:69:24
+14     89466057        rs11845218      G       T       .       PASS    AA=T;DP=69      GT:GQ:DP        1|1:48:16       1|0:100:23      1|1:72:24
+12     82664689        rs10437866      A       G       .       PASS    AA=A;DP=82      GT:GQ:DP        1|1:48:16       1|0:100:24      1|1:100:34
+1      206770872       rs4326621       G       A       .       PASS    AA=A;DP=97      GT:GQ:DP        1|1:48:16       1|0:100:24      1|1:100:56
+6      136241362       rs9483886       T       A       .       PASS    AA=T;DP=84      GT:GQ:DP        1|1:48:16       1|0:100:25      1|1:78:45
+X      30888569        rs34164238      A       G       .       PASS    AA=A;DP=105     GT:GQ:DP        1|1:48:16       1|0:100:27      1|1:87:29
+1      117831124       rs1290539       T       G       .       PASS    AA=G;DP=118;HM2;HM3     GT:GQ:DP        1|1:48:16       1|0:100:30      1|1:100:72
+X      11612895        rs5979455       T       C       .       PASS    AA=C;DP=108     GT:GQ:DP        1|1:48:16       1|0:100:32      1|1:100:40
+12     117931194       rs6490226       A       C       .       PASS    AA=C;DP=76      GT:GQ:DP        1|1:48:16       1|0:25:6        1|1:100:38
+16     52079   .       C       A       .       PASS    AA=C;DP=63      GT:GQ:DP        1|1:48:16       1|0:35:5        1|1:79:39
+2      14280928        rs4544405       A       T       .       PASS    AA=T;DP=95      GT:GQ:DP        1|1:48:16       1|0:57:17       1|1:100:58
+8      16211535        rs17621553      G       C       .       PASS    AA=g;DP=62      GT:GQ:DP        1|1:48:16       1|0:60:17       1|1:72:24
+7      155630378       rs35549919      T       C       .       PASS    AA=T;DP=75      GT:GQ:DP        1|1:48:16       1|0:73:14       1|1:55:36
+19     21748904        rs10424132      G       A       .       PASS    AA=A;DP=77      GT:GQ:DP        1|1:48:16       1|0:73:20       1|1:90:31
+11     55609746        rs12361511      C       T       .       PASS    AA=C;DP=80      GT:GQ:DP        1|1:48:16       1|0:75:14       1|1:100:49
+6      94358814        rs2022156       T       G       .       PASS    AA=G;DP=82      GT:GQ:DP        1|1:48:16       1|0:77:11       1|1:100:54
+8      86570520        rs6988475       A       G       .       PASS    AA=G;DP=82      GT:GQ:DP        1|1:48:16       1|0:86:13       1|1:95:51
+10     3188940 rs4612707       C       T       .       PASS    AA=C;DP=90      GT:GQ:DP        1|1:48:16       1|0:98:27       1|1:100:35
+10     37159424        rs1726687       C       T       .       PASS    AA=C;DP=94      GT:GQ:DP        1|1:48:17       0|1:100:14      1|0:100:49
+3      95158563        rs6441601       C       A       .       PASS    AA=A;DP=68      GT:GQ:DP        1|1:48:17       0|1:100:17      1|0:100:27
+X      36669113        rs9779046       A       C       .       PASS    AA=a;DP=111     GT:GQ:DP        1|1:48:17       0|1:100:18      1|0:100:33
+3      80538327        rs6548693       A       G       .       PASS    AA=A;DP=83      GT:GQ:DP        1|1:48:17       0|1:100:19      1|0:100:35
+X      24095606        rs2704845       C       T       .       PASS    AA=T;DP=112     GT:GQ:DP        1|1:48:17       0|1:100:20      1|0:100:36
+18     56913021        rs242684        G       C       .       PASS    AA=C;DP=92      GT:GQ:DP        1|1:48:17       0|1:100:20      1|0:100:56
+8      34459449        rs10100213      C       T       .       PASS    AA=C;DP=96      GT:GQ:DP        1|1:48:17       0|1:100:20      1|0:100:60
+4      41251466        rs7682470       A       T       .       PASS    AA=A;DP=109     GT:GQ:DP        1|1:48:17       0|1:100:21      1|0:100:72
+10     100563435       rs1252318       G       A       .       PASS    AA=A;DP=92      GT:GQ:DP        1|1:48:17       0|1:100:22      1|0:100:52
+X      10638074        rs960419        G       A       .       PASS    AA=A;DP=93      GT:GQ:DP        1|1:48:17       0|1:100:23      1|0:100:34
+X      132719150       .       A       G       .       PASS    AA=G;DP=111     GT:GQ:DP        1|1:48:17       0|1:100:23      1|0:100:38
+11     133355726       rs329655        C       A       .       PASS    AA=A;DP=122     GT:GQ:DP        1|1:48:17       0|1:100:23      1|0:100:81
+18     23468505        rs888293        T       C       .       PASS    AA=t;DP=97      GT:GQ:DP        1|1:48:17       0|1:100:28      1|0:100:50
+15     47703708        rs11070711      C       G       .       PASS    AA=g;DP=115     GT:GQ:DP        1|1:48:17       0|1:100:28      1|0:100:74
+6      8484793 rs9505474       C       G       .       PASS    AA=G;DP=95      GT:GQ:DP        1|1:48:17       0|1:76:21       1|0:100:54
+10     53386186        rs4935294       A       G       .       PASS    AA=G;DP=66      GT:GQ:DP        1|1:48:17       0|1:77:8        1|0:100:43
+3      169784442       rs3853732       G       T       .       PASS    AA=T;DP=68      GT:GQ:DP        1|1:48:17       0|1:91:17       1|0:100:22
+20     59404757        rs7269354       C       T       .       PASS    AA=C;DP=82      GT:GQ:DP        1|1:48:17       0|1:91:18       1|0:100:40
+11     27229309        rs7483297       T       A       .       PASS    AA=A;DP=75      GT:GQ:DP        1|1:48:17       0|1:94:15       1|0:100:42
+7      83105919        rs536299        A       C       .       PASS    AA=C;DP=91      GT:GQ:DP        1|1:48:17       0|1:94:16       1|0:100:60
+14     56987193        rs1189920       A       C       .       PASS    AA=C;DP=89      GT:GQ:DP        1|1:48:17       0|1:97:13       1|0:100:58
+X      3675113 .       A       G       .       PASS    AA=a;DP=79      GT:GQ:DP        1|1:48:17       1|0:100:11      1|1:70:34
+16     54434784        rs12923750      A       G       .       PASS    AA=G;DP=87      GT:GQ:DP        1|1:48:17       1|0:100:16      1|1:100:46
+3      62586229        rs2600850       C       T       .       PASS    AA=T;DP=117     GT:GQ:DP        1|1:48:17       1|0:100:29      1|1:100:72
+15     84850010        rs11857429      T       C       .       PASS    AA=T;DP=95      GT:GQ:DP        1|1:48:17       1|0:55:20       1|1:100:57
+5      25076567        rs1021559       T       A       .       PASS    AA=A;DP=64      GT:GQ:DP        1|1:48:17       1|0:70:10       1|1:38:27
+1      176057334       rs10913435      T       A       .       PASS    AA=A;DP=100;HM2 GT:GQ:DP        1|1:48:17       1|0:81:18       1|1:100:65
+4      117934801       rs12649281      G       T       .       PASS    AA=g;DP=96      GT:GQ:DP        1|1:48:17       1|0:96:23       1|1:100:58
+2      60146774        rs10186395      C       T       .       PASS    AA=T;DP=114     GT:GQ:DP        1|1:48:18       0|1:100:16      1|0:100:77
+X      73411730        rs174160        G       A       .       PASS    AA=g;DP=109     GT:GQ:DP        1|1:48:18       0|1:100:24      1|0:100:42
+8      40425757        rs12375391      T       C       .       PASS    AA=C;DP=85      GT:GQ:DP        1|1:48:18       0|1:19:17       1|0:100:51
+22     38322606        rs9611202       G       A       .       PASS    AA=g;DP=83      GT:GQ:DP        1|1:48:18       0|1:29:10       1|0:100:56
+13     64442338        rs1849436       A       G       .       PASS    AA=A;DP=89      GT:GQ:DP        1|1:48:18       0|1:30:16       1|0:100:56
+14     94968563        rs8014833       A       G       .       PASS    AA=G;DP=67      GT:GQ:DP        1|1:48:18       0|1:49:10       1|0:100:37
+2      195767756       rs34287920      G       C       .       PASS    AA=C;DP=90      GT:GQ:DP        1|1:48:18       0|1:57:16       1|0:100:57
+2      18252457        rs4832557       C       T       .       PASS    AA=T;DP=82      GT:GQ:DP        1|1:48:18       0|1:66:20       1|0:100:45
+10     30711514        rs2489861       G       A       .       PASS    AA=A;DP=72      GT:GQ:DP        1|1:48:18       0|1:85:17       1|0:100:24
+9      71992054        rs1927144       C       G       .       PASS    AA=A;DP=74      GT:GQ:DP        1|1:48:18       0|1:87:20       1|0:100:24
+16     52600480        rs6499664       A       C       .       PASS    AA=C;DP=101     GT:GQ:DP        1|1:48:19       0|1:83:20       1|0:100:60
+4      162458463       rs10029538      C       T       .       PASS    AA=T;DP=68      GT:GQ:DP        1|1:48:19       1|1:47:15       1|1:100:34
+12     92948406        rs7300660       T       C       .       PASS    AA=C;DP=73      GT:GQ:DP        1|1:48:20       1|1:30:14       1|1:100:36
+21     22775335        rs1073955       G       C       .       PASS    AA=G;DP=91      GT:GQ:DP        1|1:48:20       1|1:47:16       1|1:100:53
+8      14995266        rs4831679       C       T       .       PASS    AA=T;DP=123     GT:GQ:DP        1|1:48:20       1|1:92:29       1|1:100:69
+8      138483869       rs2960117       T       C       .       PASS    AA=C;DP=111     GT:GQ:DP        1|1:48:22       1|0:100:27      1|1:100:63
+1      237566823       rs7526159       A       C       .       PASS    AA=C;DP=101     GT:GQ:DP        1|1:48:22       1|0:70:16       1|1:100:64
+15     52057937        rs2725587       A       C       .       PASS    AA=C;DP=97      GT:GQ:DP        1|1:48:22       1|0:74:15       1|1:100:55
+17     74589993        .       G       A       .       PASS    AA=g;DP=106     GT:GQ:DP        1|1:48:23       0|0:36:12       1|0:100:69
+19     38570677        rs17570 G       A       .       PASS    AA=A;DP=107     GT:GQ:DP        1|1:48:23       0|1:100:13      1|0:100:72
+12     99360928        rs1536464       T       C       .       PASS    AA=C;DP=92      GT:GQ:DP        1|1:48:24       1|1:26:16       1|1:100:41
+5      104384351       rs4604170       T       C       .       PASS    AA=C;DP=101     GT:GQ:DP        1|1:48:24       1|1:56:19       1|1:100:61
+13     24903056        rs668001        T       C       .       PASS    AA=C;DP=123     GT:GQ:DP        1|1:48:24       1|1:62:20       1|1:100:83
+2      191376333       rs1921901       A       C       .       PASS    AA=C;DP=107     GT:GQ:DP        1|1:48:24       1|1:80:33       1|1:100:36
+18     53965535        rs11876767      G       C       .       PASS    AA=G;DP=93      GT:GQ:DP        1|1:48:25       0|0:30:10       1|0:100:60
+10     128233413       rs1469881       A       G       .       PASS    AA=G;DP=123     GT:GQ:DP        1|1:48:25       1|1:80:25       1|1:100:76
+22     43179375        rs9614596       G       C       .       PASS    AA=g;DP=90      GT:GQ:DP        1|1:48:28       0|0:33:11       1|0:100:50
+20     24319062        rs1997790       A       C       .       PASS    AA=C;DP=154     GT:GQ:DP        1|1:48:28       1|1:34:35       1|1:100:46
+14     85236627        .       G       A       .       PASS    AA=G;DP=81      GT:GQ:DP        1|1:48:29       0|0:24:8        1|0:100:41
+14     44157810        rs10142825      C       A       .       PASS    AA=C;DP=136     GT:GQ:DP        1|1:48:29       0|0:57:31       1|0:100:34
+20     53103626        rs1499856       T       C       .       PASS    AA=T;DP=127     GT:GQ:DP        1|1:48:29       0|0:66:22       1|0:100:73
+5      169720949       rs6895628       G       C       .       PASS    AA=C;DP=122     GT:GQ:DP        1|1:48:29       0|0:72:24       1|0:100:72
+4      92832326        .       C       A       .       PASS    AA=C;DP=141     GT:GQ:DP        1|1:48:29       0|0:87:29       1|0:100:82
+3      64315677        rs9812599       A       C       .       PASS    AA=A;DP=129     GT:GQ:DP        1|1:48:29       0|0:99:33       1|0:100:67
+15     70776330        rs3850989       T       G       .       PASS    AA=G;DP=79      GT:GQ:DP        1|1:48:29       1|1:12:12       1|1:99:39
+9      116433353       rs7047395       C       G       .       PASS    AA=G;DP=121     GT:GQ:DP        1|1:48:30       1|1:15:20       1|1:100:72
+7      131065812       rs2909478       T       C       .       PASS    AA=C;DP=116     GT:GQ:DP        1|1:48:30       1|1:69:30       1|1:100:57
+12     128588710       .       A       G       .       PASS    AA=A;DP=118     GT:GQ:DP        1|1:48:32       0|1:100:23      1|0:100:64
+7      134692727       rs6467587       T       G       .       PASS    AA=G;DP=118     GT:GQ:DP        1|1:48:33       0|1:100:20      1|0:100:67
+1      199910714       rs1736448       C       G       .       PASS    AA=C;DP=120     GT:GQ:DP        1|1:48:36       1|0:88:19       1|1:100:65
+2      171297318       rs6433236       G       A       .       PASS    AA=A;DP=129     GT:GQ:DP        1|1:48:38       1|1:32:22       1|1:100:70
+5      97122200        rs10065471      T       C       .       PASS    AA=C;DP=133     GT:GQ:DP        1|1:48:39       1|1:30:23       1|1:100:72
+12     78744019        rs10778691      G       T       .       PASS    AA=T;DP=70      GT:GQ:DP        1|1:49:15       1|1:38:11       1|1:100:43
+X      122147761       rs16997146      T       C       .       PASS    AA=T;DP=114     GT:GQ:DP        1|1:49:18       0|0:100:34      1|0:100:28
+19     23512203        rs1088408       T       A       .       PASS    AA=N;DP=125     GT:GQ:DP        1|1:49:18       0|0:100:41      1|0:100:64
+4      1691146 rs2854916       G       A       .       PASS    AA=.;DP=99      GT:GQ:DP        1|1:49:18       0|0:33:12       1|0:100:70
+13     83811888        .       C       T       .       PASS    AA=C;DP=90      GT:GQ:DP        1|1:49:18       0|0:37:20       1|0:100:51
+1      105915932       rs4272673       C       T       .       PASS    AA=T;DP=67      GT:GQ:DP        1|1:49:18       0|0:39:14       1|0:100:26
+2      14129853        rs57670102      A       T       .       PASS    AA=A;DP=94      GT:GQ:DP        1|1:49:18       0|0:43:21       1|0:100:51
+16     52434543        rs2388406       G       C       .       PASS    AA=G;DP=103     GT:GQ:DP        1|1:49:18       0|0:45:15       1|0:100:60
+5      80676937        .       A       T       .       PASS    AA=A;DP=95      GT:GQ:DP        1|1:49:18       0|0:51:17       1|0:100:61
+15     60222210        rs1881414       C       T       .       PASS    AA=T;DP=91      GT:GQ:DP        1|1:49:18       0|0:51:18       1|0:100:56
+4      120850957       rs2714959       C       T       .       PASS    AA=T;DP=100     GT:GQ:DP        1|1:49:18       0|0:54:18       1|0:100:61
+11     103728654       rs11226328      C       T       .       PASS    AA=C;DP=84      GT:GQ:DP        1|1:49:18       0|0:57:23       1|0:100:39
+X      71259051        .       G       A       .       PASS    AA=G;DP=115     GT:GQ:DP        1|1:49:18       0|0:60:20       1|0:100:38
+16     74819177        rs16943988      A       G       .       PASS    AA=A;DP=129     GT:GQ:DP        1|1:49:18       0|0:60:20       1|0:100:49
+8      54206753        rs2553850       T       C       .       PASS    AA=C;DP=89      GT:GQ:DP        1|1:49:18       0|0:60:20       1|0:100:51
+20     9605467 rs6140996       T       C       .       PASS    AA=T;DP=95      GT:GQ:DP        1|1:49:18       0|0:60:20       1|0:100:56
+X      123180319       .       T       C       .       PASS    AA=T;DP=119     GT:GQ:DP        1|1:49:18       0|0:60:36       1|0:100:32
+9      73053765        rs7040929       T       C       .       PASS    AA=T;DP=109     GT:GQ:DP        1|1:49:18       0|0:63:21       1|0:100:70
+8      123701766       rs60102729      C       T       .       PASS    AA=C;DP=97      GT:GQ:DP        1|1:49:18       0|0:69:23       1|0:100:54
+16     75876072        rs1820253       T       C       .       PASS    AA=T;DP=117     GT:GQ:DP        1|1:49:18       0|0:75:26       1|0:100:33
+9      31330536        rs10125602      C       T       .       PASS    AA=c;DP=105     GT:GQ:DP        1|1:49:18       0|0:75:26       1|0:100:59
+X      31037460        .       G       T       .       PASS    AA=G;DP=119     GT:GQ:DP        1|1:49:18       0|0:77:39       1|0:100:43
+X      76029967        .       T       C       .       PASS    AA=N;DP=132     GT:GQ:DP        1|1:49:18       0|0:78:26       1|0:100:54
+21     26801259        rs222975        T       C       .       PASS    AA=T;DP=125     GT:GQ:DP        1|1:49:18       0|0:81:28       1|0:100:40
+X      130177186       rs4830216       G       T       .       PASS    AA=G;DP=135     GT:GQ:DP        1|1:49:18       0|0:81:39       1|0:100:39
+8      137661784       rs305285        A       G       .       PASS    AA=A;DP=110     GT:GQ:DP        1|1:49:18       0|0:84:28       1|0:100:65
+11     79278151        .       G       A       .       PASS    AA=A;DP=106     GT:GQ:DP        1|1:49:18       0|0:90:32       1|0:100:59
+8      109259893       rs641820        T       C       .       PASS    AA=C;DP=72      GT:GQ:DP        1|1:49:18       1|1:12:17       1|1:72:36
+4      13792367        rs2004909       A       G       .       PASS    AA=A;DP=119     GT:GQ:DP        1|1:49:19       0|0:100:40      1|0:100:62
+9      31196969        rs7860113       C       T       .       PASS    AA=C;DP=77      GT:GQ:DP        1|1:49:19       0|0:10:9        1|0:100:37
+22     16602263        rs181390        A       G       .       PASS    AA=A;DP=118     GT:GQ:DP        1|1:49:19       0|0:11:8        1|0:100:92
+19     15211367        rs60057301      C       T       .       PASS    AA=C;DP=69      GT:GQ:DP        1|1:49:19       0|0:18:6        1|0:100:37
+3      4874161 rs7647216       T       C       .       PASS    AA=T;DP=70      GT:GQ:DP        1|1:49:19       0|0:21:9        1|0:100:33
+16     57575135        .       C       T       .       PASS    AA=C;DP=93      GT:GQ:DP        1|1:49:19       0|0:29:15       1|0:100:61
+9      102982369       rs12377425      G       A       .       PASS    AA=A;DP=76      GT:GQ:DP        1|1:49:19       0|0:30:11       1|0:100:48
+X      48188742        rs12007204      T       C       .       PASS    AA=t;DP=115     GT:GQ:DP        1|1:49:19       0|0:33:30       1|0:100:40
+4      169987089       rs6822711       C       T       .       PASS    AA=T;DP=115     GT:GQ:DP        1|1:49:19       0|0:36:26       1|0:100:69
+4      7006987 rs56094305      C       T       .       PASS    AA=C;DP=111     GT:GQ:DP        1|1:49:19       0|0:39:13       1|0:100:37
+13     84460601        rs9547023       A       G       .       PASS    AA=A;DP=83      GT:GQ:DP        1|1:49:19       0|0:42:14       1|0:100:50
+8      18707426        rs61255116      A       G       .       PASS    AA=A;DP=95      GT:GQ:DP        1|1:49:19       0|0:42:14       1|0:100:62
+18     59843004        rs7242068       A       G       .       PASS    AA=A;DP=86      GT:GQ:DP        1|1:49:19       0|0:45:16       1|0:100:51
+9      70577820        rs17482181      C       G       .       PASS    AA=C;DP=98      GT:GQ:DP        1|1:49:19       0|0:54:19       1|0:100:58
+13     105906320       rs879994        T       C       .       PASS    AA=T;DP=122     GT:GQ:DP        1|1:49:19       0|0:81:27       1|0:100:80
+X      118212720       .       G       A       .       PASS    AA=g;DP=132     GT:GQ:DP        1|1:49:19       0|0:87:29       1|0:100:36
+4      138528712       rs766081        A       G       .       PASS    AA=A;DP=104     GT:GQ:DP        1|1:49:19       0|0:96:32       1|0:100:54
+3      67597831        rs7612528       T       C       .       PASS    AA=t;DP=133     GT:GQ:DP        1|1:49:19       0|0:99:34       1|0:100:78
+4      156191475       rs58544775      A       G       .       PASS    AA=G;DP=90      GT:GQ:DP        1|1:49:20       0|0:72:24       1|0:100:47
+9      104521225       rs7870713       C       T       .       PASS    AA=C;DP=98      GT:GQ:DP        1|1:49:20       1|1:65:21       1|1:100:54
+5      64742130        rs6890693       T       C       .       PASS    AA=C;DP=83      GT:GQ:DP        1|1:49:21       1|1:80:25       1|1:100:37
+20     57838615        rs843819        G       A       .       PASS    AA=A;DP=125     GT:GQ:DP        1|1:49:23       1|1:66:28       1|1:100:74
+2      56750339        .       C       T       .       PASS    AA=C;DP=114     GT:GQ:DP        1|1:49:24       0|0:81:27       1|0:100:67
+9      113083595       rs1332774       C       G       .       PASS    AA=G;DP=109     GT:GQ:DP        1|1:49:24       0|1:100:18      1|0:100:67
+19     20107428        rs1654289       T       C       .       PASS    AA=-;DP=104     GT:GQ:DP        1|1:49:24       0|1:62:24       1|0:100:55
+11     20410954        rs1596375       C       T       .       PASS    AA=C;DP=87      GT:GQ:DP        1|1:49:24       0|1:79:13       1|0:100:50
+5      170521848       rs6884588       A       G       .       PASS    AA=G;DP=118     GT:GQ:DP        1|1:49:24       1|0:100:24      1|1:100:59
+13     97876764        rs7996944       G       A       .       PASS    AA=A;DP=113     GT:GQ:DP        1|1:49:24       1|0:100:30      1|1:100:59
+7      72391720        rs2353065       C       T       .       PASS    AA=T;DP=89      GT:GQ:DP        1|1:49:24       1|1:26:9        1|1:90:56
+3      154481721       rs6786541       C       G       .       PASS    AA=C;DP=108     GT:GQ:DP        1|1:49:24       1|1:34:18       1|1:100:62
+4      129725383       rs59261281      A       C       .       PASS    AA=A;DP=133     GT:GQ:DP        1|1:49:25       0|0:66:22       1|0:100:87
+6      17788588        rs58563026      T       C       .       PASS    AA=T;DP=111     GT:GQ:DP        1|1:49:25       0|0:72:24       1|0:100:62
+4      184747396       rs4394039       T       C       .       PASS    AA=T;DP=116     GT:GQ:DP        1|1:49:25       0|0:81:28       1|0:100:63
+2      55750102        rs13001425      T       C       .       PASS    AA=T;DP=72      GT:GQ:DP        1|1:49:25       1|0:32:14       1|1:66:22
+11     129417494       rs12283745      C       T       .       PASS    AA=C;DP=114     GT:GQ:DP        1|1:49:25       1|0:62:18       1|1:100:73
+13     82229615        rs716927        C       A       .       PASS    AA=C;DP=121     GT:GQ:DP        1|1:49:26       1|0:100:28      1|1:100:67
+9      19560458        rs7036288       A       C       .       PASS    AA=C;DP=97      GT:GQ:DP        1|1:49:26       1|1:17:15       1|1:100:54
+4      38087323        rs6847705       G       A       .       PASS    AA=G;DP=105     GT:GQ:DP        1|1:49:26       1|1:17:16       1|1:100:63
+2      231460786       rs7588842       A       G       .       PASS    AA=G;DP=129     GT:GQ:DP        1|1:49:26       1|1:29:19       1|1:100:83
+6      49796160        rs584490        A       G       .       PASS    AA=A;DP=86      GT:GQ:DP        1|1:49:26       1|1:41:12       1|1:100:51
+6      15129896        rs9383010       A       G       .       PASS    AA=a;DP=100     GT:GQ:DP        1|1:49:26       1|1:44:14       1|1:100:56
+12     44485856        rs1863127       T       C       .       PASS    AA=C;DP=99      GT:GQ:DP        1|1:49:26       1|1:49:26       1|1:100:46
+12     125843803       rs7305615       A       G       .       PASS    AA=a;DP=74      GT:GQ:DP        1|1:49:26       1|1:50:15       1|1:100:23
+2      48578246        rs7575998       A       T       .       PASS    AA=A;DP=93      GT:GQ:DP        1|1:49:26       1|1:56:17       1|1:100:49
+21     30554145        rs9978565       T       C       .       PASS    AA=T;DP=92      GT:GQ:DP        1|1:49:26       1|1:59:18       1|1:100:47
+2      81005617        rs13030250      T       C       .       PASS    AA=t;DP=89      GT:GQ:DP        1|1:49:26       1|1:62:19       1|1:100:31
+3      179536589       rs2583484       T       A       .       PASS    AA=A;DP=99      GT:GQ:DP        1|1:49:26       1|1:65:20       1|1:100:47
+17     51009509        rs7211404       G       A       .       PASS    AA=g;DP=126     GT:GQ:DP        1|1:49:26       1|1:68:21       1|1:100:37
+21     19316785        rs432758        C       T       .       PASS    AA=T;DP=118     GT:GQ:DP        1|1:49:26       1|1:69:26       1|1:100:65
+8      70568980        rs2704036       T       C       .       PASS    AA=C;DP=108     GT:GQ:DP        1|1:49:26       1|1:71:22       1|1:100:62
+11     60469543        rs2957232       G       A       .       PASS    AA=A;DP=136     GT:GQ:DP        1|1:49:26       1|1:71:23       1|1:100:88
+12     65252871        rs7137153       A       G       .       PASS    AA=G;DP=133     GT:GQ:DP        1|1:49:26       1|1:77:30       1|1:100:66
+X      38759428        rs6520553       C       A       .       PASS    AA=C;DP=147     GT:GQ:DP        1|1:49:27       0|0:84:28       1|0:100:57
+22     21502489        .       T       C       .       PASS    AA=t;DP=117     GT:GQ:DP        1|1:49:27       1|1:60:30       1|1:100:60
+6      115079821       rs2947949       T       C       .       PASS    AA=C;DP=115     GT:GQ:DP        1|1:49:27       1|1:89:28       1|1:100:44
+4      18567652        rs2601575       T       A       .       PASS    AA=A;DP=109     GT:GQ:DP        1|1:49:28       0|1:100:16      1|0:100:25
+9      98232315        rs10820604      A       G       .       PASS    AA=A;DP=151     GT:GQ:DP        1|1:49:28       0|1:100:47      1|0:100:76
+9      131426812       rs6478909       T       C       .       PASS    AA=C;DP=101     GT:GQ:DP        1|1:49:29       1|1:49:15       1|1:100:57
+2      15654931        rs2302931       C       A       .       PASS    AA=C;DP=105     GT:GQ:DP        1|1:49:30       1|0:100:23      1|1:85:39
+17     76977722        rs11657566      T       C       .       PASS    AA=C;DP=128     GT:GQ:DP        1|1:49:31       1|1:51:16       1|1:100:84
+9      91287114        rs10908930      G       A       .       PASS    AA=G;DP=122     GT:GQ:DP        1|1:49:32       0|0:48:16       1|0:100:70
+3      129476015       rs2955100       G       A       .       PASS    AA=g;DP=116     GT:GQ:DP        1|1:49:33       0|0:33:11       1|0:100:72
+8      87343826        rs56243139      T       C       .       PASS    AA=T;DP=105     GT:GQ:DP        1|1:49:39       0|0:45:15       1|0:100:51
+5      85053457        .       C       T       .       PASS    AA=C;DP=79      GT:GQ:DP        1|1:4:11        0|1:47:15       1|0:100:53
+X      16616984        rs6527704       A       T       .       PASS    AA=.;DP=51      GT:GQ:DP        1|1:4:11        1|0:3:13        1|1:3:24
+8      13662628        .       C       G       .       PASS    AA=C;DP=105     GT:GQ:DP        1|1:4:12        0|0:52:17       1|0:100:75
+1      174438423       rs791800        T       C       .       PASS    AA=T;DP=86;HM2  GT:GQ:DP        1|1:4:12        0|0:55:19       1|0:100:56
+17     76739711        rs59549421      C       G       .       PASS    AA=c;DP=54      GT:GQ:DP        1|1:4:15        0|0:40:14       1|0:25:16
+X      145455884       rs6626652       A       C       .       PASS    AA=C;DP=115     GT:GQ:DP        1|1:4:18        0|0:43:14       1|0:100:46
+X      90798552        .       G       T       .       PASS    AA=T;DP=67      GT:GQ:DP        1|1:4:3 0|0:33:22       1|0:100:33
+X      124500163       rs5974938       T       G       .       PASS    AA=N;DP=67      GT:GQ:DP        1|1:4:7 0|1:18:15       1|0:100:28
+X      134561766       rs4610911       T       A       .       PASS    AA=T;DP=85      GT:GQ:DP        1|1:4:8 0|1:77:25       1|0:89:24
+X      112501798       rs5974453       A       G       .       PASS    AA=G;DP=121     GT:GQ:DP        1|1:50:15       1|1:100:37      1|1:100:35
+10     102479321       rs10883536      A       C       .       PASS    AA=C;DP=57      GT:GQ:DP        1|1:50:15       1|1:20:5        1|1:77:30
+8      116513688       rs1180635       T       A       .       PASS    AA=A;DP=67      GT:GQ:DP        1|1:50:15       1|1:21:13       1|1:100:29
+15     51206051        rs653511        A       C       .       PASS    AA=C;DP=78      GT:GQ:DP        1|1:50:15       1|1:23:17       1|1:100:47
+2      216251934       rs1250058       T       G       .       PASS    AA=G;DP=70      GT:GQ:DP        1|1:50:15       1|1:27:10       1|1:100:45
+13     77570952        rs2775109       A       C       .       PASS    AA=A;DP=94      GT:GQ:DP        1|1:50:15       1|1:29:19       1|1:100:60
+7      11536042        rs12670077      A       C       .       PASS    AA=T;DP=93      GT:GQ:DP        1|1:50:15       1|1:29:19       1|1:100:61
+2      222919954       rs2116029       A       G       .       PASS    AA=G;DP=105     GT:GQ:DP        1|1:50:15       1|1:29:27       1|1:100:64
+11     80676694        rs1379730       C       T       .       PASS    AA=T;DP=64      GT:GQ:DP        1|1:50:15       1|1:29:8        1|1:100:39
+4      31814842        rs12651443      A       T       .       PASS    AA=T;DP=60      GT:GQ:DP        1|1:50:15       1|1:30:21       1|1:93:21
+18     25588219        rs8089961       C       T       .       PASS    AA=T;DP=83      GT:GQ:DP        1|1:50:15       1|1:32:10       1|1:100:56
+18     47992881        rs34726549      C       T       .       PASS    AA=T;DP=73      GT:GQ:DP        1|1:50:15       1|1:32:11       1|1:88:30
+12     19570804        rs1986510       T       A       .       PASS    AA=A;DP=110     GT:GQ:DP        1|1:50:15       1|1:32:20       1|1:100:34
+17     1129388 rs9900456       A       G       .       PASS    AA=G;DP=53      GT:GQ:DP        1|1:50:15       1|1:32:9        1|1:100:26
+9      113031028       rs2570387       C       T       .       PASS    AA=T;DP=65      GT:GQ:DP        1|1:50:15       1|1:35:11       1|1:100:27
+20     22372227        rs6048095       C       A       .       PASS    AA=A;DP=77      GT:GQ:DP        1|1:50:15       1|1:38:11       1|1:100:53
+14     105754022       rs7141277       T       C       .       PASS    AA=.;DP=92      GT:GQ:DP        1|1:50:15       1|1:38:11       1|1:100:65
+10     54990602        rs668434        T       A       .       PASS    AA=A;DP=59      GT:GQ:DP        1|1:50:15       1|1:38:12       1|1:100:23
+X      18847131        rs6633170       A       G       .       PASS    AA=N;DP=107     GT:GQ:DP        1|1:50:15       1|1:38:22       1|1:100:38
+X      19501804        rs5909317       C       T       .       PASS    AA=T;DP=69      GT:GQ:DP        1|1:50:15       1|1:41:12       1|1:100:27
+13     70053550        rs6562637       A       C       .       PASS    AA=C;DP=69      GT:GQ:DP        1|1:50:15       1|1:41:12       1|1:100:40
+7      37715289        rs2709106       G       A       .       PASS    AA=A;DP=72      GT:GQ:DP        1|1:50:15       1|1:41:12       1|1:100:41
+7      16820407        rs7783269       A       G       .       PASS    AA=a;DP=93      GT:GQ:DP        1|1:50:15       1|1:41:12       1|1:100:68
+2      67203030        rs1921285       T       C       .       PASS    AA=C;DP=95      GT:GQ:DP        1|1:50:15       1|1:43:17       1|1:100:47
+X      99954009        rs1987821       A       G       .       PASS    AA=G;DP=91      GT:GQ:DP        1|1:50:15       1|1:44:13       1|1:100:36
+12     48613902        rs687048        A       G       .       PASS    AA=G;DP=77      GT:GQ:DP        1|1:50:15       1|1:44:13       1|1:100:49
+3      198491097       rs1741950       C       T       .       PASS    AA=T;DP=70      GT:GQ:DP        1|1:50:15       1|1:44:13       1|1:60:28
+9      110373027       rs1958942       T       C       .       PASS    AA=C;DP=76      GT:GQ:DP        1|1:50:15       1|1:44:14       1|1:100:47
+17     49305115        rs2331881       C       T       .       PASS    AA=T;DP=82      GT:GQ:DP        1|1:50:15       1|1:44:14       1|1:100:54
+5      51702511        rs4865532       C       A       .       PASS    AA=A;DP=71      GT:GQ:DP        1|1:50:15       1|1:44:16       1|1:100:29
+14     42169170        rs10150256      T       C       .       PASS    AA=C;DP=70      GT:GQ:DP        1|1:50:15       1|1:47:14       1|1:100:27
+16     60789766        rs4553650       C       T       .       PASS    AA=T;DP=78      GT:GQ:DP        1|1:50:15       1|1:47:14       1|1:100:47
+14     40615506        rs6572054       C       T       .       PASS    AA=N;DP=73      GT:GQ:DP        1|1:50:15       1|1:47:15       1|1:100:29
+14     71914010        rs2332831       A       G       .       PASS    AA=G;DP=94      GT:GQ:DP        1|1:50:15       1|1:48:15       1|1:100:63
+X      78273841        rs1591628       A       C       .       PASS    AA=N;DP=99      GT:GQ:DP        1|1:50:15       1|1:48:21       1|1:100:37
+6      27362822        rs6913724       A       T       .       PASS    AA=T;DP=95      GT:GQ:DP        1|1:50:15       1|1:50:15       1|1:100:26
+X      50786682        rs1970500       T       C       .       PASS    AA=N;DP=92      GT:GQ:DP        1|1:50:15       1|1:50:15       1|1:100:35
+1      188922594       rs7538910       A       T       .       PASS    AA=A;DP=86      GT:GQ:DP        1|1:50:15       1|1:50:15       1|1:100:56
+7      87067437        rs2214102       T       C       .       PASS    AA=C;DP=97      GT:GQ:DP        1|1:50:15       1|1:50:16       1|1:100:52
+X      129235914       rs2744054       T       G       .       PASS    AA=G;DP=89      GT:GQ:DP        1|1:50:15       1|1:53:16       1|1:100:35
+6      98522298        rs9387952       T       G       .       PASS    AA=G;DP=88      GT:GQ:DP        1|1:50:15       1|1:54:23       1|1:64:44
+6      19133720        rs4716325       G       C       .       PASS    AA=C;DP=64      GT:GQ:DP        1|1:50:15       1|1:56:17       1|1:100:25
+20     16416286        rs1002911       C       A       .       PASS    AA=A;DP=78      GT:GQ:DP        1|1:50:15       1|1:56:17       1|1:100:44
+2      212956375       rs6753466       G       A       .       PASS    AA=A;DP=92      GT:GQ:DP        1|1:50:15       1|1:56:17       1|1:100:50
+4      61356169        rs6820076       C       T       .       PASS    AA=T;DP=104     GT:GQ:DP        1|1:50:15       1|1:56:17       1|1:100:72
+12     72247083        rs2586902       A       T       .       PASS    AA=T;DP=62      GT:GQ:DP        1|1:50:15       1|1:56:18       1|1:100:28
+4      44780660        rs13142361      A       G       .       PASS    AA=A;DP=88      GT:GQ:DP        1|1:50:15       1|1:59:19       1|1:100:53
+11     109819350       rs2724440       G       T       .       PASS    AA=T;DP=81      GT:GQ:DP        1|1:50:15       1|1:62:19       1|1:100:34
+19     23714876        rs7249699       A       T       .       PASS    AA=a;DP=83      GT:GQ:DP        1|1:50:15       1|1:62:19       1|1:100:48
+10     22400303        rs3011628       G       T       .       PASS    AA=T;DP=86      GT:GQ:DP        1|1:50:15       1|1:62:19       1|1:100:51
+9      120198462       rs1418514       C       T       .       PASS    AA=C;DP=91      GT:GQ:DP        1|1:50:15       1|1:62:19       1|1:100:58
+4      44841228        rs7686413       C       T       .       PASS    AA=C;DP=101     GT:GQ:DP        1|1:50:15       1|1:62:19       1|1:100:68
+X      150149435       rs1202892       G       A       .       PASS    AA=A;DP=112     GT:GQ:DP        1|1:50:15       1|1:62:20       1|1:100:33
+X      47901963        rs2314334       A       G       .       PASS    AA=N;DP=92      GT:GQ:DP        1|1:50:15       1|1:62:20       1|1:100:36
+5      100617678       rs5019803       G       A       .       PASS    AA=A;DP=89      GT:GQ:DP        1|1:50:15       1|1:62:20       1|1:100:55
+14     85172611        rs4904264       G       T       .       PASS    AA=T;DP=60      GT:GQ:DP        1|1:50:15       1|1:65:20       1|1:100:19
+X      92751411        rs6522711       C       T       .       PASS    AA=G;DP=78      GT:GQ:DP        1|1:50:15       1|1:65:20       1|1:100:22
+18     6090124 rs28573830      C       T       .       PASS    AA=C;DP=90      GT:GQ:DP        1|1:50:15       1|1:65:23       1|1:100:52
+3      26681979        rs7622332       C       T       .       PASS    AA=T;DP=104     GT:GQ:DP        1|1:50:15       1|1:68:22       1|1:100:60
+2      181371074       rs4273190       T       A       .       PASS    AA=.;DP=88      GT:GQ:DP        1|1:50:15       1|1:74:23       1|1:100:50
+18     59738648        rs976038        C       G       .       PASS    AA=G;DP=122     GT:GQ:DP        1|1:50:15       1|1:74:23       1|1:100:85
+8      6870678 rs4448290       C       T       .       PASS    AA=.;DP=105     GT:GQ:DP        1|1:50:15       1|1:77:24       1|1:100:64
+3      14705461        rs871971        G       T       .       PASS    AA=T;DP=104     GT:GQ:DP        1|1:50:15       1|1:77:24       1|1:100:65
+2      188711718       rs6713266       A       G       .       PASS    AA=G;DP=82      GT:GQ:DP        1|1:50:15       1|1:77:26       1|1:100:40
+X      144582184       rs2842694       G       A       .       PASS    AA=N;DP=111     GT:GQ:DP        1|1:50:15       1|1:80:25       1|1:100:45
+6      51438715        rs1342622       C       T       .       PASS    AA=C;DP=112     GT:GQ:DP        1|1:50:15       1|1:80:25       1|1:100:70
+3      78035724        rs6548529       G       T       .       PASS    AA=G;DP=89      GT:GQ:DP        1|1:50:15       1|1:80:26       1|1:100:32
+9      106171273       rs1907677       C       T       .       PASS    AA=T;DP=76      GT:GQ:DP        1|1:50:15       1|1:80:26       1|1:100:35
+2      152807204       rs4664546       A       G       .       PASS    AA=G;DP=89      GT:GQ:DP        1|1:50:15       1|1:83:27       1|1:100:48
+X      5056896 rs1462634       A       G       .       PASS    AA=.;DP=76      GT:GQ:DP        1|1:50:15       1|1:83:28       1|1:95:15
+2      133353436       rs6746565       C       T       .       PASS    AA=T;DP=95      GT:GQ:DP        1|1:50:15       1|1:86:27       1|1:100:41
+7      89170979        rs2521319       C       T       .       PASS    AA=T;DP=126     GT:GQ:DP        1|1:50:15       1|1:89:28       1|1:100:46
+4      137723361       rs6829369       T       C       .       PASS    AA=C;DP=109     GT:GQ:DP        1|1:50:15       1|1:89:30       1|1:100:63
+X      75169123        rs4590598       T       C       .       PASS    AA=N;DP=114     GT:GQ:DP        1|1:50:15       1|1:89:35       1|1:100:43
+10     122900971       rs2243586       A       G       .       PASS    AA=A;DP=85      GT:GQ:DP        1|1:50:15       1|1:95:30       1|1:100:41
+16     51160652        rs3112565       G       A       .       PASS    AA=G;DP=120     GT:GQ:DP        1|1:50:15       1|1:98:31       1|1:100:73
+8      31562191        rs10954803      C       A       .       PASS    AA=A;DP=87      GT:GQ:DP        1|1:50:16       1|1:27:13       1|1:100:58
+4      157026516       rs6811138       G       C       .       PASS    AA=C;DP=53      GT:GQ:DP        1|1:50:16       1|1:29:8        1|1:97:25
+9      12075717        rs7036903       G       T       .       PASS    AA=T;DP=80      GT:GQ:DP        1|1:50:16       1|1:32:10       1|1:100:53
+15     32777896        rs2461367       C       T       .       PASS    AA=T;DP=71      GT:GQ:DP        1|1:50:16       1|1:41:12       1|1:100:42
+12     103376095       rs4964291       G       C       .       PASS    AA=C;DP=66      GT:GQ:DP        1|1:50:16       1|1:41:12       1|1:96:34
+4      180792401       rs3911614       G       A       .       PASS    AA=G;DP=93      GT:GQ:DP        1|1:50:16       1|1:41:22       1|1:100:53
+5      102937069       rs1288759       G       A       .       PASS    AA=A;DP=85      GT:GQ:DP        1|1:50:16       1|1:47:15       1|1:100:54
+7      110178186       rs7783134       T       A       .       PASS    AA=T;DP=66      GT:GQ:DP        1|1:50:16       1|1:50:15       1|1:100:27
+14     98720687        rs1257421       G       C       .       PASS    AA=C;DP=75      GT:GQ:DP        1|1:50:16       1|1:53:17       1|1:100:40
+3      26815560        rs1488216       A       T       .       PASS    AA=T;DP=82      GT:GQ:DP        1|1:50:16       1|1:53:17       1|1:100:40
+1      217375467       rs1605042       C       T       .       PASS    AA=T;DP=85;HM2  GT:GQ:DP        1|1:50:16       1|1:56:17       1|1:100:52
+4      79910109        rs4975149       A       G       .       PASS    AA=G;DP=94      GT:GQ:DP        1|1:50:16       1|1:59:19       1|1:100:58
+3      81526429        rs275353        A       T       .       PASS    AA=T;DP=70      GT:GQ:DP        1|1:50:16       1|1:59:20       1|1:100:23
+5      59326240        rs1583434       T       C       .       PASS    AA=C;DP=97      GT:GQ:DP        1|1:50:16       1|1:64:24       1|1:100:57
+X      100562945       rs12556314      T       C       .       PASS    AA=C;DP=109     GT:GQ:DP        1|1:50:16       1|1:68:22       1|1:100:39
+6      91043041        rs604912        A       G       .       PASS    AA=G;DP=105     GT:GQ:DP        1|1:50:16       1|1:68:22       1|1:100:65
+3      78506028        rs7621280       C       A       .       PASS    AA=A;DP=90      GT:GQ:DP        1|1:50:16       1|1:71:22       1|1:100:46
+20     14486330        rs2093042       C       T       .       PASS    AA=T;DP=89      GT:GQ:DP        1|1:50:16       1|1:71:22       1|1:100:49
+14     28150744        rs1956401       A       T       .       PASS    AA=T;DP=88      GT:GQ:DP        1|1:50:16       1|1:74:23       1|1:100:49
+2      77568245        rs4624407       T       C       .       PASS    AA=C;DP=90      GT:GQ:DP        1|1:50:17       1|1:22:11       1|1:100:52
+6      146981085       rs9403796       A       G       .       PASS    AA=G;DP=75      GT:GQ:DP        1|1:50:17       1|1:35:11       1|1:100:48
+8      113387234       rs1420859       A       T       .       PASS    AA=T;DP=83      GT:GQ:DP        1|1:50:18       1|1:38:11       1|1:100:53
+4      16085540        rs1120373       T       C       .       PASS    AA=t;DP=85      GT:GQ:DP        1|1:50:18       1|1:53:16       1|1:100:49
+13     56879805        rs9285213       C       T       .       PASS    AA=C;DP=84      GT:GQ:DP        1|1:50:20       1|1:42:17       1|1:100:39
+9      136429938       rs10745392      T       C       .       PASS    AA=C;DP=76      GT:GQ:DP        1|1:50:21       1|1:8:14        1|1:60:30
+6      36756898        rs3176337       A       C       .       PASS    AA=C;DP=108     GT:GQ:DP        1|1:50:22       1|0:100:18      1|1:95:71
+7      6281291 rs4724793       T       C       .       PASS    AA=C;DP=112     GT:GQ:DP        1|1:50:22       1|1:53:18       1|1:100:71
+2      50550419        rs2193062       G       A       .       PASS    AA=G;DP=83      GT:GQ:DP        1|1:50:22       1|1:68:21       1|1:100:30
+8      13282716        rs289516        C       A       .       PASS    AA=A;DP=115     GT:GQ:DP        1|1:50:23       1|1:100:33      1|1:100:48
+8      20095858        rs10096273      T       A       .       PASS    AA=t;DP=80      GT:GQ:DP        1|1:50:23       1|1:62:19       1|1:100:37
+14     27062957        rs10138674      C       T       .       PASS    AA=T;DP=116     GT:GQ:DP        1|1:50:23       1|1:62:19       1|1:100:75
+15     74378248        rs8030454       A       G       .       PASS    AA=A;DP=107     GT:GQ:DP        1|1:50:24       0|0:54:18       1|0:100:64
+2      192688945       rs2356947       G       A       .       PASS    AA=G;DP=85      GT:GQ:DP        1|1:50:24       0|1:100:22      1|0:100:30
+8      76557169        rs10957765      A       G       .       PASS    AA=N;DP=76      GT:GQ:DP        1|1:50:24       1|0:6:11        1|1:85:28
+11     21266209        rs7945361       A       G       .       PASS    AA=A;DP=97      GT:GQ:DP        1|1:50:24       1|0:75:16       1|1:68:57
+13     63372452        rs9317363       T       C       .       PASS    AA=C;DP=105     GT:GQ:DP        1|1:50:24       1|1:83:30       1|1:100:51
+4      136825550       rs12506208      T       G       .       PASS    AA=G;DP=89      GT:GQ:DP        1|1:50:25       1|1:25:15       1|1:100:49
+12     84250660        rs10735480      T       G       .       PASS    AA=G;DP=99      GT:GQ:DP        1|1:50:25       1|1:55:23       1|1:100:49
+17     76692575        rs57792378      A       C       .       PASS    AA=C;DP=100     GT:GQ:DP        1|1:50:25       1|1:62:19       1|1:100:48
+3      189562990       rs7629039       G       A       .       PASS    AA=A;DP=118     GT:GQ:DP        1|1:50:25       1|1:68:21       1|1:100:74
+14     99953359        rs34253116      A       C       .       PASS    AA=A;DP=117     GT:GQ:DP        1|1:50:27       0|0:49:21       1|0:100:70
+10     28596501        rs10763655      A       G       .       PASS    AA=G;DP=108     GT:GQ:DP        1|1:50:28       1|0:100:16      1|1:100:64
+5      1104918 rs3810853       G       A       .       PASS    AA=G;DP=116     GT:GQ:DP        1|1:50:29       0|0:54:19       1|0:100:68
+3      45337638        rs9877658       G       C       .       PASS    AA=G;DP=105     GT:GQ:DP        1|1:50:29       0|1:100:16      1|0:100:62
+15     61975312        rs4776641       C       A       .       PASS    AA=A;DP=108     GT:GQ:DP        1|1:50:29       0|1:100:18      1|0:100:60
+11     48042529        rs7943769       G       A       .       PASS    AA=G;DP=98      GT:GQ:DP        1|1:50:29       0|1:79:16       1|0:100:54
+11     62541769        rs11231306      G       C       .       PASS    AA=C;DP=115     GT:GQ:DP        1|1:50:29       0|1:88:17       1|0:100:69
+15     39044058        rs1869907       C       T       .       PASS    AA=C;DP=107     GT:GQ:DP        1|1:50:30       0|0:12:11       1|0:100:64
+6      82317618        rs9443930       T       C       .       PASS    AA=T;DP=144     GT:GQ:DP        1|1:50:30       0|0:69:24       1|0:100:51
+18     36410642        rs3884664       C       T       .       PASS    AA=C;DP=125     GT:GQ:DP        1|1:50:30       0|0:75:26       1|0:100:63
+10     28377284        rs12244891      T       G       .       PASS    AA=G;DP=132     GT:GQ:DP        1|1:50:30       0|0:78:26       1|0:100:73
+3      149924310       rs12721241      G       A       .       PASS    AA=A;DP=141     GT:GQ:DP        1|1:50:30       0|0:78:26       1|0:100:84
+6      143914037       rs9496664       A       C       .       PASS    AA=C;DP=112     GT:GQ:DP        1|1:50:30       0|0:87:29       1|0:100:53
+8      92995318        rs58500487      C       T       .       PASS    AA=c;DP=142     GT:GQ:DP        1|1:50:30       0|0:99:34       1|0:100:80
+6      27278001        rs6932243       C       T       .       PASS    AA=C;DP=107     GT:GQ:DP        1|1:50:32       1|1:20:22       1|1:98:46
+4      34802407        rs9992553       A       T       .       PASS    AA=c;DP=126     GT:GQ:DP        1|1:50:38       0|0:78:26       1|0:100:62
+12     71220841        rs1389497       A       G       .       PASS    AA=A;DP=94      GT:GQ:DP        1|1:51:17       1|0:100:14      1|1:100:64
+13     103897442       rs9582867       T       C       .       PASS    AA=C;DP=83      GT:GQ:DP        1|1:51:17       1|0:100:18      1|1:100:34
+4      21370088        rs7658944       C       T       .       PASS    AA=T;DP=103     GT:GQ:DP        1|1:51:17       1|0:100:18      1|1:100:65
+10     4623384 rs1838240       T       C       .       PASS    AA=T;DP=107     GT:GQ:DP        1|1:51:17       1|0:100:22      1|1:100:68
+5      106559634       rs7729133       G       A       .       PASS    AA=G;DP=122     GT:GQ:DP        1|1:51:17       1|0:100:24      1|1:100:80
+X      78987505        rs2579845       C       T       .       PASS    AA=c;DP=89      GT:GQ:DP        1|1:51:17       1|0:100:24      1|1:84:28
+4      182244385       rs6816559       T       G       .       PASS    AA=T;DP=73      GT:GQ:DP        1|1:51:17       1|0:100:25      1|1:28:24
+X      17184888        rs5950866       A       T       .       PASS    AA=A;DP=103     GT:GQ:DP        1|1:51:17       1|0:100:25      1|1:78:36
+5      110359798       rs17132590      T       C       .       PASS    AA=N;DP=116     GT:GQ:DP        1|1:51:17       1|0:100:26      1|1:100:69
+7      42503292        rs4637706       C       A       .       PASS    AA=A;DP=88      GT:GQ:DP        1|1:51:17       1|0:100:28      1|1:99:33
+8      34220380        rs2643268       G       A       .       PASS    AA=A;DP=107     GT:GQ:DP        1|1:51:17       1|0:100:31      1|1:100:57
+1      1551194 .       G       A       .       PASS    AA=A;DP=69      GT:GQ:DP        1|1:51:17       1|0:55:8        1|1:51:45
+4      110511422       rs6841133       C       A       .       PASS    AA=C;DP=106     GT:GQ:DP        1|1:51:17       1|0:72:21       1|1:100:67
+15     77639812        rs1685165       A       G       .       PASS    AA=A;DP=64      GT:GQ:DP        1|1:51:17       1|0:76:13       1|1:72:26
+4      81654152        rs7685226       A       G       .       PASS    AA=G;DP=77      GT:GQ:DP        1|1:51:17       1|0:82:15       1|1:100:45
+9      11936421        rs7039047       T       C       .       PASS    AA=T;DP=89      GT:GQ:DP        1|1:51:17       1|0:98:18       1|1:100:55
+16     70488308        rs8062946       A       G       .       PASS    AA=N;DP=79      GT:GQ:DP        1|1:51:17       1|1:21:17       1|1:85:46
+3      144982649       rs36086202      G       A       .       PASS    AA=G;DP=85      GT:GQ:DP        1|1:51:18       0|1:100:12      1|0:100:39
+4      177996055       rs4311269       C       T       .       PASS    AA=T;DP=68      GT:GQ:DP        1|1:51:18       0|1:100:13      1|0:100:36
+5      118667644       rs17145124      C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        1|1:51:18       0|1:100:15      1|0:100:76
+12     68225202        rs524286        T       A       .       PASS    AA=A;DP=91      GT:GQ:DP        1|1:51:18       0|1:100:17      1|0:100:54
+8      77424695        rs16939265      C       T       .       PASS    AA=C;DP=89      GT:GQ:DP        1|1:51:18       0|1:100:18      1|0:100:54
+8      52218161        rs7843526       T       A       .       PASS    AA=A;DP=98      GT:GQ:DP        1|1:51:18       0|1:100:19      1|0:100:61
+11     37906363        rs10836893      A       T       .       PASS    AA=T;DP=79      GT:GQ:DP        1|1:51:18       0|1:100:20      1|0:100:41
+6      95452503        rs9342425       T       G       .       PASS    AA=T;DP=82      GT:GQ:DP        1|1:51:18       0|1:100:20      1|0:100:44
+13     57427920        rs1409518       C       A       .       PASS    AA=C;DP=88      GT:GQ:DP        1|1:51:18       0|1:100:20      1|0:100:51
+2      142022048       rs2054655       C       T       .       PASS    AA=T;DP=104     GT:GQ:DP        1|1:51:18       0|1:100:20      1|0:100:71
+6      32669052        rs9270577       A       C       .       PASS    AA=C;DP=94      GT:GQ:DP        1|1:51:18       0|1:100:21      1|0:100:29
+12     82415899        rs3103506       T       C       .       PASS    AA=C;DP=91      GT:GQ:DP        1|1:51:18       0|1:100:21      1|0:100:54
+14     32890644        rs8017035       C       A       .       PASS    AA=A;DP=108     GT:GQ:DP        1|1:51:18       0|1:100:22      1|0:100:67
+18     69841451        rs6566777       G       A       .       PASS    AA=G;DP=131     GT:GQ:DP        1|1:51:18       0|1:100:24      1|0:100:51
+X      115678615       rs5912025       A       G       .       PASS    AA=G;DP=127     GT:GQ:DP        1|1:51:18       0|1:100:24      1|0:100:52
+11     80707792        rs7945232       T       C       .       PASS    AA=C;DP=100     GT:GQ:DP        1|1:51:18       0|1:100:25      1|0:100:54
+3      5142997 rs62253635      G       T       .       PASS    AA=T;DP=89      GT:GQ:DP        1|1:51:18       0|1:100:26      1|0:100:41
+11     25402490        rs4262688       G       A       .       PASS    AA=g;DP=90      GT:GQ:DP        1|1:51:18       0|1:100:26      1|0:100:47
+13     62901127        rs2449700       C       G       .       PASS    AA=C;DP=106     GT:GQ:DP        1|1:51:18       0|1:100:26      1|0:100:61
+12     127314532       rs1211547       T       C       .       PASS    AA=C;DP=106     GT:GQ:DP        1|1:51:18       0|1:100:27      1|0:100:61
+X      12503469        rs731485        A       T       .       PASS    AA=T;DP=140     GT:GQ:DP        1|1:51:18       0|1:100:29      1|0:100:44
+1      225316900       rs1343895       T       A       .       PASS    AA=A;DP=104     GT:GQ:DP        1|1:51:18       0|1:100:29      1|0:100:58
+5      101000609       rs6870883       C       T       .       PASS    AA=T;DP=94      GT:GQ:DP        1|1:51:18       0|1:100:30      1|0:100:37
+X      86683576        rs12844667      G       A       .       PASS    AA=N;DP=124     GT:GQ:DP        1|1:51:18       0|1:100:30      1|0:100:40
+2      131963145       rs56916515      T       C       .       PASS    AA=.;DP=128     GT:GQ:DP        1|1:51:18       0|1:100:30      1|0:100:83
+X      31557762        rs1039159       C       A       .       PASS    AA=A;DP=131     GT:GQ:DP        1|1:51:18       0|1:100:31      1|0:100:44
+4      23083637        rs6829223       G       A       .       PASS    AA=g;DP=80      GT:GQ:DP        1|1:51:18       0|1:16:8        1|0:100:54
+3      192154022       rs9812571       G       A       .       PASS    AA=A;DP=81      GT:GQ:DP        1|1:51:18       0|1:21:12       1|0:100:53
+8      113713102       rs13259943      T       A       .       PASS    AA=T;DP=77      GT:GQ:DP        1|1:51:18       0|1:24:18       1|0:100:41
+4      77192573        rs6848620       G       C       .       PASS    AA=C;DP=95      GT:GQ:DP        1|1:51:18       0|1:46:19       1|0:100:58
+8      113849502       rs16884089      T       A       .       PASS    AA=T;DP=81      GT:GQ:DP        1|1:51:18       0|1:59:16       1|0:100:47
+18     30357167        rs1589477       A       G       .       PASS    AA=A;DP=96      GT:GQ:DP        1|1:51:18       0|1:67:23       1|0:100:55
+11     96723212        rs4754101       A       T       .       PASS    AA=T;DP=82      GT:GQ:DP        1|1:51:18       0|1:70:15       1|0:100:46
+4      61004282        rs12644487      A       C       .       PASS    AA=C;DP=67      GT:GQ:DP        1|1:51:18       0|1:76:12       1|0:100:25
+3      174687662       .       T       C       .       PASS    AA=T;DP=97      GT:GQ:DP        1|1:51:18       0|1:76:19       1|0:100:59
+14     63546433        rs7146588       T       A       .       PASS    AA=A;DP=96      GT:GQ:DP        1|1:51:18       0|1:92:16       1|0:100:62
+4      111444498       rs396815        A       C       .       PASS    AA=C;DP=84      GT:GQ:DP        1|1:51:18       0|1:95:22       1|0:100:43
+1      188863102       rs616807        G       A       .       PASS    AA=A;DP=98;HM2  GT:GQ:DP        1|1:51:18       0|1:98:17       1|0:100:65
+15     52764260        rs58635484      C       A       .       PASS    AA=C;DP=77      GT:GQ:DP        1|1:51:18       0|1:99:16       1|0:100:42
+19     50168262        rs204481        T       C       .       PASS    AA=C;DP=71      GT:GQ:DP        1|1:51:18       1|0:100:12      1|1:100:38
+12     10599371        .       G       A       .       PASS    AA=G;DP=105     GT:GQ:DP        1|1:51:18       1|0:100:21      1|1:100:68
+5      29852430        rs6870155       T       C       .       PASS    AA=C;DP=91      GT:GQ:DP        1|1:51:18       1|0:100:23      1|1:100:50
+22     26199017        rs4822885       A       G       .       PASS    AA=G;DP=92      GT:GQ:DP        1|1:51:18       1|0:100:23      1|1:94:38
+13     105972886       rs9558780       G       A       .       PASS    AA=A;DP=96      GT:GQ:DP        1|1:51:18       1|0:100:24      1|1:100:56
+10     24466699        rs10764449      T       C       .       PASS    AA=C;DP=81      GT:GQ:DP        1|1:51:18       1|0:100:30      1|1:66:22
+8      4686913 .       G       T       .       PASS    AA=-;DP=64      GT:GQ:DP        1|1:51:18       1|0:39:17       1|1:37:21
+4      2163210 rs9996701       G       T       .       PASS    AA=G;DP=67      GT:GQ:DP        1|1:51:18       1|0:47:11       1|1:90:32
+12     77755820        rs7133967       G       A       .       PASS    AA=A;DP=67      GT:GQ:DP        1|1:51:18       1|0:71:16       1|1:87:29
+7      9595427 rs2657230       G       C       .       PASS    AA=C;DP=95      GT:GQ:DP        1|1:51:18       1|0:82:17       1|1:100:59
+14     82086415        rs12100690      G       A       .       PASS    AA=A;DP=79      GT:GQ:DP        1|1:51:18       1|0:86:19       1|1:90:44
+2      155712375       rs13388362      T       C       .       PASS    AA=T;DP=75      GT:GQ:DP        1|1:51:18       1|0:91:9        1|1:82:47
+2      14321101        rs12692525      G       A       .       PASS    AA=A;DP=111     GT:GQ:DP        1|1:51:18       1|0:92:20       1|1:100:72
+16     25997121        rs3924880       T       C       .       PASS    AA=C;DP=82      GT:GQ:DP        1|1:51:18       1|0:98:13       1|1:95:46
+4      89015013        rs6815121       A       G       .       PASS    AA=G;DP=114     GT:GQ:DP        1|1:51:19       0|1:100:20      1|0:100:75
+11     110801530       rs2156721       G       A       .       PASS    AA=G;DP=104     GT:GQ:DP        1|1:51:19       0|1:100:23      1|0:100:61
+6      32613144        .       A       G       .       PASS    AA=-;DP=123     GT:GQ:DP        1|1:51:19       0|1:100:25      1|0:100:78
+6      24279358        rs9393535       C       G       .       PASS    AA=G;DP=105     GT:GQ:DP        1|1:51:19       0|1:100:27      1|0:100:54
+9      138560673       rs3013307       A       G       .       PASS    AA=N;DP=66      GT:GQ:DP        1|1:51:19       0|1:10:3        1|0:100:33
+11     110102907       rs7952465       C       G       .       PASS    AA=G;DP=65      GT:GQ:DP        1|1:51:19       0|1:54:15       1|0:100:25
+4      178214071       rs13110250      T       C       .       PASS    AA=T;DP=102     GT:GQ:DP        1|1:51:19       0|1:55:15       1|0:100:70
+14     22922337        rs17091278      T       C       .       PASS    AA=C;DP=84      GT:GQ:DP        1|1:51:19       0|1:67:12       1|0:100:48
+17     13156193        rs4791548       C       T       .       PASS    AA=T;DP=105     GT:GQ:DP        1|1:51:19       0|1:76:25       1|0:100:47
+7      53537765        rs4289755       G       A       .       PASS    AA=G;DP=92      GT:GQ:DP        1|1:51:19       1|0:100:17      1|1:100:54
+8      101796141       rs1786319       T       C       .       PASS    AA=T;DP=84      GT:GQ:DP        1|1:51:19       1|0:100:23      1|1:88:41
+22     22122781        rs8137219       G       A       .       PASS    AA=N;DP=72      GT:GQ:DP        1|1:51:20       0|1:15:6        1|0:100:37
+17     75577298        rs9898792       G       A       .       PASS    AA=A;DP=76      GT:GQ:DP        1|1:51:20       0|1:18:9        1|0:100:39
+5      21434259        rs4452532       G       A       .       PASS    AA=A;DP=114     GT:GQ:DP        1|1:51:20       0|1:43:25       1|0:100:67
+5      76950495        .       C       T       .       PASS    AA=C;DP=111     GT:GQ:DP        1|1:51:20       0|1:59:21       1|0:100:70
+20     46689080        rs6095223       C       T       .       PASS    AA=c;DP=111     GT:GQ:DP        1|1:51:20       0|1:84:20       1|0:100:58
+19     21188694        rs30109 A       C       .       PASS    AA=a;DP=90      GT:GQ:DP        1|1:51:21       1|1:38:22       1|1:100:47
+7      48780116        rs17132613      C       T       .       PASS    AA=T;DP=84      GT:GQ:DP        1|1:51:21       1|1:59:18       1|1:100:43
+12     66144993        rs35351458      A       T       .       PASS    AA=A;DP=92      GT:GQ:DP        1|1:51:21       1|1:59:19       1|1:100:49
+2      49487803        rs2704351       C       T       .       PASS    AA=T;DP=95      GT:GQ:DP        1|1:51:21       1|1:62:20       1|1:100:49
+3      167450413       rs2902331       C       T       .       PASS    AA=C;DP=104     GT:GQ:DP        1|1:51:21       1|1:71:22       1|1:100:61
+7      42564211        rs6976479       C       G       .       PASS    AA=G;DP=109     GT:GQ:DP        1|1:51:21       1|1:74:24       1|1:100:64
+X      30296349        rs1119619       G       C       .       PASS    AA=G;DP=117     GT:GQ:DP        1|1:51:21       1|1:81:29       1|1:100:38
+11     11398351        rs11021845      C       A       .       PASS    AA=C;DP=101     GT:GQ:DP        1|1:51:22       1|0:37:9        1|1:100:70
+7      3274877 rs6963073       C       T       .       PASS    AA=C;DP=82      GT:GQ:DP        1|1:51:22       1|1:34:16       1|1:100:37
+15     29153642        rs28861698      A       T       .       PASS    AA=A;DP=92      GT:GQ:DP        1|1:51:23       1|0:100:21      1|1:100:46
+4      73295962        rs9998604       A       T       .       PASS    AA=A;DP=103     GT:GQ:DP        1|1:51:23       1|0:64:18       1|1:100:64
+11     77480573        rs606164        G       C       .       PASS    AA=C;DP=108     GT:GQ:DP        1|1:51:23       1|1:68:21       1|1:100:63
+3      14050921        rs56071023      A       G       .       PASS    AA=A;DP=104     GT:GQ:DP        1|1:51:24       0|0:60:21       1|0:100:60
+19     41050403        rs230260        T       C       .       PASS    AA=C;DP=150     GT:GQ:DP        1|1:51:24       0|0:66:23       1|0:100:102
+3      143723813       rs9808943       T       C       .       PASS    AA=C;DP=127     GT:GQ:DP        1|1:51:24       0|1:100:21      1|0:100:81
+8      128958553       rs6470588       A       C       .       PASS    AA=C;DP=106     GT:GQ:DP        1|1:51:24       0|1:33:11       1|0:100:69
+13     38874885        rs7334879       T       G       .       PASS    AA=T;DP=132     GT:GQ:DP        1|1:51:25       0|0:84:29       1|0:100:76
+18     36198906        rs1368790       G       A       .       PASS    AA=A;DP=103     GT:GQ:DP        1|1:51:25       1|1:65:20       1|1:100:61
+13     27509149        rs2491234       A       G       .       PASS    AA=G;DP=96      GT:GQ:DP        1|1:51:26       0|0:57:19       1|0:100:51
+3      74181311        rs6790509       G       A       .       PASS    AA=G;DP=111     GT:GQ:DP        1|1:51:26       0|1:100:24      1|0:100:62
+17     7053604 rs222854        C       T       .       PASS    AA=T;DP=104     GT:GQ:DP        1|1:51:27       1|0:54:18       1|1:86:61
+14     53803939        rs7143516       T       G       .       PASS    AA=G;DP=116     GT:GQ:DP        1|1:51:27       1|1:33:24       1|1:100:64
+3      69667931        rs12638810      C       G       .       PASS    AA=G;DP=114     GT:GQ:DP        1|1:51:28       0|1:16:17       1|0:100:70
+17     78628567        rs6502042       A       C       .       PASS    AA=C;DP=118     GT:GQ:DP        1|1:51:28       1|0:100:24      1|1:100:63
+6      166166649       rs1874190       C       T       .       PASS    AA=t;DP=113     GT:GQ:DP        1|1:51:28       1|0:84:25       1|1:100:62
+1      177601785       rs11577489      G       C       .       PASS    AA=G;DP=120     GT:GQ:DP        1|1:51:29       0|1:24:9        1|0:100:81
+8      22123714        rs4242430       A       C       .       PASS    AA=C;DP=97      GT:GQ:DP        1|1:51:29       1|1:24:19       1|1:100:47
+12     114038035       rs35437 T       G       .       PASS    AA=G;DP=136     GT:GQ:DP        1|1:51:29       1|1:86:34       1|1:100:69
+7      28533925        rs150606        C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        1|1:51:30       1|1:62:26       1|1:100:65
+5      151039931       rs17112187      C       A       .       PASS    AA=C;DP=119     GT:GQ:DP        1|1:51:31       0|0:66:22       1|0:100:66
+6      152103272       rs3020301       T       C       .       PASS    AA=C;DP=119     GT:GQ:DP        1|1:51:31       1|1:59:18       1|1:100:72
+9      18528671        rs13301259      A       G       .       PASS    AA=A;DP=154     GT:GQ:DP        1|1:51:31       1|1:75:26       1|1:100:55
+13     90950040        rs610028        T       G       .       PASS    AA=G;DP=141     GT:GQ:DP        1|1:51:31       1|1:77:24       1|1:100:71
+2      136607168       rs6727727       C       T       .       PASS    AA=C;DP=137     GT:GQ:DP        1|1:51:34       0|0:75:25       1|0:100:78
+6      108292440       rs56387538      G       T       .       PASS    AA=-;DP=69      GT:GQ:DP        1|1:52:16       1|1:12:9        1|1:76:33
+8      52508726        rs1367816       T       A       .       PASS    AA=A;DP=89      GT:GQ:DP        1|1:52:16       1|1:14:13       1|1:100:62
+6      93522890        rs2812133       A       G       .       PASS    AA=G;DP=69      GT:GQ:DP        1|1:52:17       1|1:35:13       1|1:100:31
+X      23145343        rs6627907       A       T       .       PASS    AA=T;DP=126     GT:GQ:DP        1|1:52:19       0|0:100:38      1|0:100:43
+10     129389262       rs1936892       C       T       .       PASS    AA=C;DP=78      GT:GQ:DP        1|1:52:19       0|0:17:13       1|0:100:46
+X      47469331        rs58740732      C       T       .       PASS    AA=C;DP=91      GT:GQ:DP        1|1:52:19       0|0:18:12       1|0:100:34
+3      195431052       rs4687535       C       T       .       PASS    AA=T;DP=103     GT:GQ:DP        1|1:52:19       0|0:28:16       1|0:100:66
+X      121836521       rs5958136       A       G       .       PASS    AA=A;DP=96      GT:GQ:DP        1|1:52:19       0|0:36:12       1|0:100:28
+14     98126942        .       C       T       .       PASS    AA=C;DP=72      GT:GQ:DP        1|1:52:19       0|0:36:12       1|0:100:29
+7      27908385        rs56410344      A       G       .       PASS    AA=A;DP=78      GT:GQ:DP        1|1:52:19       0|0:36:13       1|0:100:46
+15     92671316        rs8037248       G       A       .       PASS    AA=G;DP=65      GT:GQ:DP        1|1:52:19       0|0:39:13       1|0:100:24
+11     114381376       rs4338563       A       G       .       PASS    AA=A;DP=75      GT:GQ:DP        1|1:52:19       0|0:39:13       1|0:100:42
+9      78124642        rs2643316       C       G       .       PASS    AA=C;DP=109     GT:GQ:DP        1|1:52:19       0|0:39:13       1|0:100:71
+13     33229988        rs9538531       C       A       .       PASS    AA=C;DP=97      GT:GQ:DP        1|1:52:19       0|0:41:25       1|0:100:53
+6      67263010        rs2670389       G       T       .       PASS    AA=G;DP=102     GT:GQ:DP        1|1:52:19       0|0:44:25       1|0:100:58
+18     24513872        rs1785774       C       A       .       PASS    AA=c;DP=94      GT:GQ:DP        1|1:52:19       0|0:45:15       1|0:100:60
+12     131258118       rs4077838       G       A       .       PASS    AA=g;DP=88      GT:GQ:DP        1|1:52:19       0|0:45:16       1|0:100:42
+18     67338997        rs591364        G       A       .       PASS    AA=A;DP=83      GT:GQ:DP        1|1:52:19       0|0:45:17       1|0:100:45
+1      107678050       rs11577598      G       A       .       PASS    AA=G;DP=80      GT:GQ:DP        1|1:52:19       0|0:46:21       1|0:100:36
+13     48391149        .       G       A       .       PASS    AA=G;DP=94      GT:GQ:DP        1|1:52:19       0|0:48:16       1|0:100:62
+3      63407866        rs57610015      G       A       .       PASS    AA=G;DP=98      GT:GQ:DP        1|1:52:19       0|0:48:17       1|0:100:61
+4      132402497       rs11943774      C       T       .       PASS    AA=T;DP=78      GT:GQ:DP        1|1:52:19       0|0:51:17       1|0:100:38
+14     91565289        rs2896190       A       G       .       PASS    AA=A;DP=76      GT:GQ:DP        1|1:52:19       0|0:51:17       1|0:100:40
+11     43113793        rs11037258      A       G       .       PASS    AA=G;DP=101     GT:GQ:DP        1|1:52:19       0|0:51:17       1|0:100:62
+4      14478041        rs28670991      C       T       .       PASS    AA=C;DP=124     GT:GQ:DP        1|1:52:19       0|0:51:18       1|0:100:88
+14     25857961        rs1950880       A       T       .       PASS    AA=T;DP=85      GT:GQ:DP        1|1:52:19       0|0:54:18       1|0:100:43
+6      87379634        rs1508350       C       G       .       PASS    AA=.;DP=88      GT:GQ:DP        1|1:52:19       0|0:54:20       1|0:100:48
+3      167677629       rs2863398       A       G       .       PASS    AA=A;DP=107     GT:GQ:DP        1|1:52:19       0|0:57:19       1|0:100:70
+8      63203993        rs62506815      G       A       .       PASS    AA=G;DP=109     GT:GQ:DP        1|1:52:19       0|0:57:20       1|0:100:73
+13     84499249        .       G       A       .       PASS    AA=g;DP=96      GT:GQ:DP        1|1:52:19       0|0:60:20       1|0:100:58
+3      6430418 rs17044819      A       T       .       PASS    AA=T;DP=76      GT:GQ:DP        1|1:52:19       0|0:63:21       1|0:100:22
+1      65900840        rs61779667      A       G       .       PASS    AA=G;DP=74      GT:GQ:DP        1|1:52:19       0|0:63:21       1|0:100:24
+1      23410910        rs609567        T       A       .       PASS    AA=T;DP=86      GT:GQ:DP        1|1:52:19       0|0:63:21       1|0:100:42
+8      24532597        .       C       T       .       PASS    AA=T;DP=94      GT:GQ:DP        1|1:52:19       0|0:63:22       1|0:100:52
+4      61049640        rs10024983      A       G       .       PASS    AA=a;DP=104     GT:GQ:DP        1|1:52:19       0|0:63:23       1|0:100:62
+3      27043430        rs4973848       C       T       .       PASS    AA=T;DP=143     GT:GQ:DP        1|1:52:19       0|0:69:26       1|0:100:54
+5      2993727 rs2974684       G       A       .       PASS    AA=A;DP=104     GT:GQ:DP        1|1:52:19       0|0:72:24       1|0:100:53
+13     93245009        rs4486747       C       A       .       PASS    AA=C;DP=112     GT:GQ:DP        1|1:52:19       0|0:78:26       1|0:100:68
+9      112314746       .       G       T       .       PASS    AA=G;DP=123     GT:GQ:DP        1|1:52:19       0|0:78:26       1|0:100:78
+5      120954404       rs4507518       C       T       .       PASS    AA=T;DP=82      GT:GQ:DP        1|1:52:19       1|0:90:24       1|1:55:28
+5      160576289       rs693785        A       T       .       PASS    AA=T;DP=86      GT:GQ:DP        1|1:52:20       0|0:24:19       1|0:100:48
+4      46047373        .       T       G       .       PASS    AA=T;DP=68      GT:GQ:DP        1|1:52:20       0|0:30:10       1|0:100:27
+1      162518619       rs28789979      T       C       .       PASS    AA=t;DP=60      GT:GQ:DP        1|1:52:20       0|0:33:11       1|0:100:22
+1      193349553       rs1542729       C       T       .       PASS    AA=T;DP=91      GT:GQ:DP        1|1:52:20       0|0:45:15       1|0:100:56
+1      188770820       rs7527135       G       A       .       PASS    AA=G;DP=88;HM2;HM3      GT:GQ:DP        1|1:52:20       0|0:48:16       1|0:100:53
+4      45767252        rs6842161       G       A       .       PASS    AA=G;DP=79      GT:GQ:DP        1|1:52:20       0|0:48:17       1|0:100:41
+12     22888037        rs7971381       G       A       .       PASS    AA=G;DP=96      GT:GQ:DP        1|1:52:20       0|0:63:21       1|0:100:58
+2      223080648       rs11884126      T       C       .       PASS    AA=t;DP=112     GT:GQ:DP        1|1:52:20       0|0:66:23       1|0:100:70
+13     107250540       .       A       G       .       PASS    AA=A;DP=112     GT:GQ:DP        1|1:52:20       0|0:69:23       1|0:100:69
+12     127593492       rs11609881      G       A       .       PASS    AA=G;DP=109     GT:GQ:DP        1|1:52:20       0|0:81:27       1|0:100:62
+2      2265438 rs28399240      T       A       .       PASS    AA=T;DP=94      GT:GQ:DP        1|1:52:20       0|0:90:30       1|0:100:44
+6      117360732       rs630434        T       C       .       PASS    AA=T;DP=79      GT:GQ:DP        1|1:52:21       0|0:48:16       1|0:100:43
+6      10409131        rs9350275       C       G       .       PASS    AA=A;DP=89      GT:GQ:DP        1|1:52:21       0|0:63:23       1|0:100:36
+6      81014887        rs3812124       A       G       .       PASS    AA=A;DP=113     GT:GQ:DP        1|1:52:21       0|0:69:24       1|0:100:67
+2      80445891        rs12468170      G       T       .       PASS    AA=G;DP=130     GT:GQ:DP        1|1:52:21       0|0:70:34       1|0:100:74
+4      100436150       rs1229987       T       C       .       PASS    AA=C;DP=115     GT:GQ:DP        1|1:52:21       0|0:8:16        1|0:100:79
+8      142589738       rs6578197       T       C       .       PASS    AA=C;DP=81      GT:GQ:DP        1|1:52:21       0|0:9:8 1|0:100:51
+16     1779222 rs344360        T       C       .       PASS    AA=T;DP=98      GT:GQ:DP        1|1:52:21       1|1:16:14       1|1:100:62
+11     23044777        rs2468559       T       C       .       PASS    AA=T;DP=105     GT:GQ:DP        1|1:52:21       1|1:70:23       1|1:100:63
+14     37775865        rs12896223      G       C       .       PASS    AA=C;DP=99      GT:GQ:DP        1|1:52:21       1|1:71:24       1|1:100:43
+4      36645544        rs4832849       C       T       .       PASS    AA=C;DP=102     GT:GQ:DP        1|1:52:22       0|0:39:13       1|0:100:55
+6      93760336        rs553913        A       G       .       PASS    AA=A;DP=91      GT:GQ:DP        1|1:52:22       0|0:78:26       1|0:100:43
+4      162921175       rs7665339       C       T       .       PASS    AA=T;DP=131     GT:GQ:DP        1|1:52:22       0|1:100:30      1|0:100:80
+19     53371962        rs10401298      G       A       .       PASS    AA=g;DP=70      GT:GQ:DP        1|1:52:22       1|0:91:10       1|1:63:31
+4      28963655        rs166351        G       A       .       PASS    AA=A;DP=82      GT:GQ:DP        1|1:52:22       1|1:37:16       1|1:100:46
+4      58674892        rs11133549      A       C       .       PASS    AA=A;DP=78      GT:GQ:DP        1|1:52:22       1|1:41:12       1|1:100:43
+10     62587402        rs2807691       A       G       .       PASS    AA=G;DP=105     GT:GQ:DP        1|1:52:22       1|1:41:12       1|1:100:70
+11     21119320        rs1260153       C       A       .       PASS    AA=A;DP=89      GT:GQ:DP        1|1:52:22       1|1:56:17       1|1:100:51
+18     20966789        rs4381672       A       G       .       PASS    AA=A;DP=105     GT:GQ:DP        1|1:52:22       1|1:71:22       1|1:100:61
+14     91238453        rs10135081      A       T       .       PASS    AA=N;DP=89      GT:GQ:DP        1|1:52:23       1|1:32:20       1|1:77:35
+1      19712062        rs4912108       A       G       .       PASS    AA=a;DP=105     GT:GQ:DP        1|1:52:23       1|1:34:21       1|1:100:60
+1      149476750       rs4971018       G       A       .       PASS    AA=A;DP=94;HM2  GT:GQ:DP        1|1:52:23       1|1:50:23       1|1:100:48
+5      100600992       rs6864835       A       G       .       PASS    AA=G;DP=122     GT:GQ:DP        1|1:52:23       1|1:77:25       1|1:100:73
+8      4747718 rs930378        A       G       .       PASS    AA=A;DP=96      GT:GQ:DP        1|1:52:23       1|1:80:25       1|1:100:49
+3      44172011        rs4682717       A       G       .       PASS    AA=G;DP=112     GT:GQ:DP        1|1:52:23       1|1:80:26       1|1:100:63
+4      101326687       rs3819182       C       A       .       PASS    AA=A;DP=103     GT:GQ:DP        1|1:52:24       0|1:92:21       1|0:100:55
+1      84844097        rs2994935       G       C       .       PASS    AA=G;DP=138     GT:GQ:DP        1|1:52:24       0|1:93:30       1|0:100:81
+18     46038344        rs4530242       G       A       .       PASS    AA=A;DP=87      GT:GQ:DP        1|1:52:24       1|0:93:17       1|1:56:36
+18     74544929        rs2931048       C       T       .       PASS    AA=T;DP=108     GT:GQ:DP        1|1:52:24       1|1:23:6        1|1:100:80
+17     23092299        rs8076777       A       C       .       PASS    AA=C;DP=92      GT:GQ:DP        1|1:52:24       1|1:42:20       1|1:100:47
+18     56827601        rs7235111       A       G       .       PASS    AA=G;DP=103     GT:GQ:DP        1|1:52:24       1|1:53:16       1|1:100:60
+7      29517948        rs1558633       G       T       .       PASS    AA=T;DP=104     GT:GQ:DP        1|1:52:24       1|1:68:21       1|1:100:58
+5      51568688        rs7442816       A       C       .       PASS    AA=C;DP=85      GT:GQ:DP        1|1:52:25       0|0:10:13       1|0:100:34
+4      85647228        .       A       C       .       PASS    AA=A;DP=121     GT:GQ:DP        1|1:52:25       1|0:100:20      1|1:100:75
+7      155086037       rs4716767       A       T       .       PASS    AA=T;DP=112     GT:GQ:DP        1|1:52:25       1|0:100:26      1|1:100:61
+7      78993200        rs7806892       G       A       .       PASS    AA=A;DP=95      GT:GQ:DP        1|1:52:25       1|1:33:21       1|1:100:48
+13     18627839        rs4141872       C       T       .       PASS    AA=c;DP=119     GT:GQ:DP        1|1:52:26       0|0:45:16       1|0:100:76
+2      7148439 rs1979187       C       T       .       PASS    AA=C;DP=136     GT:GQ:DP        1|1:52:26       0|0:54:18       1|0:100:52
+3      132288691       rs4682648       G       A       .       PASS    AA=G;DP=93      GT:GQ:DP        1|1:52:26       0|0:60:21       1|0:100:47
+18     22346666        rs9945300       C       G       .       PASS    AA=G;DP=98      GT:GQ:DP        1|1:52:26       0|1:100:20      1|0:100:48
+3      31962769        rs4073765       C       T       .       PASS    AA=C;DP=76      GT:GQ:DP        1|1:52:26       1|0:100:20      1|1:23:22
+11     9346274 rs7126422       T       C       .       PASS    AA=C;DP=96      GT:GQ:DP        1|1:52:26       1|1:22:14       1|1:100:46
+21     21275764        rs8129920       A       C       .       PASS    AA=C;DP=73      GT:GQ:DP        1|1:52:26       1|1:32:9        1|1:100:38
+8      1179845 rs4976875       T       G       .       PASS    AA=T;DP=101     GT:GQ:DP        1|1:52:26       1|1:45:19       1|1:100:45
+10     27157609        rs2477939       A       T       .       PASS    AA=T;DP=106     GT:GQ:DP        1|1:52:26       1|1:68:21       1|1:100:60
+5      157312930       rs3095990       G       A       .       PASS    AA=A;DP=117     GT:GQ:DP        1|1:52:26       1|1:74:23       1|1:100:69
+19     56299886        rs2691249       A       C       .       PASS    AA=C;DP=139     GT:GQ:DP        1|1:52:27       0|0:54:18       1|0:100:52
+17     11611652        rs9903317       C       T       .       PASS    AA=T;DP=119     GT:GQ:DP        1|1:52:27       0|0:63:21       1|0:100:70
+12     39071782        rs4351885       G       T       .       PASS    AA=G;DP=124     GT:GQ:DP        1|1:52:27       0|1:100:27      1|0:100:67
+1      53402437        rs6672178       C       T       .       PASS    AA=T;DP=93;HM2  GT:GQ:DP        1|1:52:27       1|1:18:15       1|1:100:44
+16     83166085        rs4782638       C       A       .       PASS    AA=A;DP=80      GT:GQ:DP        1|1:52:27       1|1:32:9        1|1:100:37
+19     10835322        rs1861633       A       G       .       PASS    AA=G;DP=117     GT:GQ:DP        1|1:52:27       1|1:38:26       1|1:100:63
+11     22993523        rs2470320       C       T       .       PASS    AA=T;DP=91      GT:GQ:DP        1|1:52:27       1|1:50:15       1|1:100:47
+1      72793520        rs2797095       T       G       .       PASS    AA=G;DP=107;HM2 GT:GQ:DP        1|1:52:27       1|1:50:25       1|1:100:55
+X      139774718       rs6528773       C       A       .       PASS    AA=C;DP=110     GT:GQ:DP        1|1:52:27       1|1:53:16       1|1:100:40
+16     61055323        rs1114522       A       C       .       PASS    AA=C;DP=118     GT:GQ:DP        1|1:52:27       1|1:62:19       1|1:100:71
+20     58809883        rs2426929       T       C       .       PASS    AA=C;DP=134     GT:GQ:DP        1|1:52:27       1|1:68:22       1|1:100:86
+15     21376327        rs6576479       C       G       .       PASS    AA=G;DP=112     GT:GQ:DP        1|1:52:27       1|1:68:23       1|1:100:62
+15     52708688        rs2947003       T       C       .       PASS    AA=T;DP=122     GT:GQ:DP        1|1:52:27       1|1:91:35       1|1:100:57
+14     67602029        .       G       A       .       PASS    AA=G;DP=108     GT:GQ:DP        1|1:52:28       0|0:33:14       1|0:100:64
+6      122474954       rs2606645       A       G       .       PASS    AA=A;DP=111     GT:GQ:DP        1|1:52:28       1|0:100:17      1|1:100:64
+12     119970042       rs1179996       A       C       .       PASS    AA=C;DP=135     GT:GQ:DP        1|1:52:30       0|1:100:25      1|0:100:38
+11     72972126        rs12285885      T       C       .       PASS    AA=C;DP=158     GT:GQ:DP        1|1:52:31       0|0:100:37      1|0:100:45
+2      226528246       rs12623868      A       C       .       PASS    AA=C;DP=134     GT:GQ:DP        1|1:52:31       0|1:98:21       1|0:100:81
+2      240913598       rs13026586      C       A       .       PASS    AA=A;DP=103     GT:GQ:DP        1|1:52:31       1|0:54:11       1|1:100:56
+16     31678224        rs12921028      T       A       .       PASS    AA=T;DP=88      GT:GQ:DP        1|1:53:16       1|1:18:15       1|1:100:57
+18     34692589        rs3924549       G       T       .       PASS    AA=G;DP=54      GT:GQ:DP        1|1:53:16       1|1:21:12       1|1:81:20
+18     3392867 rs11872295      T       C       .       PASS    AA=T;DP=96      GT:GQ:DP        1|1:53:16       1|1:24:17       1|1:100:63
+12     130418145       rs7397489       A       G       .       PASS    AA=N;DP=82      GT:GQ:DP        1|1:53:16       1|1:26:7        1|1:100:49
+16     87812050        rs4785609       C       G       .       PASS    AA=G;DP=70      GT:GQ:DP        1|1:53:16       1|1:29:9        1|1:100:35
+14     48051029        rs4409996       C       T       .       PASS    AA=T;DP=72      GT:GQ:DP        1|1:53:16       1|1:29:9        1|1:100:49
+4      165933378       rs6536858       A       G       .       PASS    AA=.;DP=64      GT:GQ:DP        1|1:53:16       1|1:35:11       1|1:100:26
+2      140672896       rs1492391       A       G       .       PASS    AA=G;DP=82      GT:GQ:DP        1|1:53:16       1|1:35:11       1|1:100:55
+6      4370828 rs4959965       A       G       .       PASS    AA=G;DP=83      GT:GQ:DP        1|1:53:16       1|1:35:21       1|1:100:46
+22     42070188        rs2744880       T       C       .       PASS    AA=C;DP=64      GT:GQ:DP        1|1:53:16       1|1:38:11       1|1:100:27
+16     47637193        rs1894952       G       C       .       PASS    AA=C;DP=77      GT:GQ:DP        1|1:53:16       1|1:38:12       1|1:100:37
+X      87526364        rs5922572       C       T       .       PASS    AA=T;DP=104     GT:GQ:DP        1|1:53:16       1|1:38:14       1|1:100:46
+5      164451430       rs6556804       G       T       .       PASS    AA=T;DP=74      GT:GQ:DP        1|1:53:16       1|1:38:22       1|1:100:26
+11     38640560        rs1904967       T       C       .       PASS    AA=T;DP=86      GT:GQ:DP        1|1:53:16       1|1:39:19       1|1:100:49
+10     83117965        rs510550        A       G       .       PASS    AA=G;DP=75      GT:GQ:DP        1|1:53:16       1|1:40:18       1|1:100:32
+8      35277586        rs6996861       A       C       .       PASS    AA=A;DP=73      GT:GQ:DP        1|1:53:16       1|1:41:12       1|1:100:45
+14     31086255        rs10083523      G       A       .       PASS    AA=g;DP=81      GT:GQ:DP        1|1:53:16       1|1:41:12       1|1:100:55
+7      121770039       rs702420        C       G       .       PASS    AA=G;DP=88      GT:GQ:DP        1|1:53:16       1|1:41:17       1|1:100:51
+1      239353792       rs10926414      T       C       .       PASS    AA=C;DP=78;HM2  GT:GQ:DP        1|1:53:16       1|1:44:13       1|1:100:50
+19     60230884        rs892090        T       G       .       PASS    AA=G;DP=88      GT:GQ:DP        1|1:53:16       1|1:44:13       1|1:100:59
+14     57852806        rs3945957       G       A       .       PASS    AA=A;DP=93      GT:GQ:DP        1|1:53:16       1|1:44:13       1|1:100:62
+12     50767906        rs7132828       A       C       .       PASS    AA=C;DP=103     GT:GQ:DP        1|1:53:16       1|1:44:14       1|1:100:71
+21     19617687        rs856179        G       T       .       PASS    AA=T;DP=69      GT:GQ:DP        1|1:53:16       1|1:47:14       1|1:100:22
+9      18627552        rs776757        G       T       .       PASS    AA=T;DP=79      GT:GQ:DP        1|1:53:16       1|1:47:14       1|1:100:46
+6      103683405       rs6571081       G       A       .       PASS    AA=A;DP=88      GT:GQ:DP        1|1:53:16       1|1:47:14       1|1:100:56
+2      76620427        rs1921258       G       A       .       PASS    AA=A;DP=67      GT:GQ:DP        1|1:53:16       1|1:47:15       1|1:100:26
+2      140753642       rs1486959       G       A       .       PASS    AA=A;DP=78      GT:GQ:DP        1|1:53:16       1|1:47:15       1|1:100:46
+16     59166979        rs4785119       A       G       .       PASS    AA=A;DP=71      GT:GQ:DP        1|1:53:16       1|1:50:15       1|1:100:31
+22     38596368        rs137944        C       G       .       PASS    AA=G;DP=70      GT:GQ:DP        1|1:53:16       1|1:50:15       1|1:100:39
+11     60692458        rs10792310      C       A       .       PASS    AA=A;DP=84      GT:GQ:DP        1|1:53:16       1|1:50:15       1|1:100:50
+7      78107311        rs38127 T       C       .       PASS    AA=C;DP=83      GT:GQ:DP        1|1:53:16       1|1:50:15       1|1:100:52
+4      115010332       rs55943853      C       A       .       PASS    AA=A;DP=57      GT:GQ:DP        1|1:53:16       1|1:50:15       1|1:82:17
+5      127862340       rs981411        A       G       .       PASS    AA=A;DP=82      GT:GQ:DP        1|1:53:16       1|1:50:16       1|1:100:50
+4      45033401        rs4254816       T       C       .       PASS    AA=C;DP=73      GT:GQ:DP        1|1:53:16       1|1:50:16       1|1:94:27
+12     29102387        rs2217905       G       C       .       PASS    AA=C;DP=78      GT:GQ:DP        1|1:53:16       1|1:50:19       1|1:100:34
+13     107060983       rs4257094       T       C       .       PASS    AA=C;DP=83      GT:GQ:DP        1|1:53:16       1|1:50:21       1|1:100:36
+4      94618476        rs969176        G       A       .       PASS    AA=A;DP=81      GT:GQ:DP        1|1:53:16       1|1:52:20       1|1:100:44
+12     23876428        rs10771036      C       T       .       PASS    AA=T;DP=58      GT:GQ:DP        1|1:53:16       1|1:53:16       1|1:100:20
+8      111952115       rs1489362       A       C       .       PASS    AA=C;DP=71      GT:GQ:DP        1|1:53:16       1|1:53:16       1|1:100:27
+7      26696725        rs212857        C       A       .       PASS    AA=a;DP=94      GT:GQ:DP        1|1:53:16       1|1:53:16       1|1:100:62
+18     7014345 rs548577        C       T       .       PASS    AA=T;DP=105     GT:GQ:DP        1|1:53:16       1|1:53:18       1|1:100:71
+8      109590378       rs1055763       A       C       .       PASS    AA=C;DP=99      GT:GQ:DP        1|1:53:16       1|1:55:24       1|1:100:56
+4      37986961        rs9999275       C       T       .       PASS    AA=C;DP=69      GT:GQ:DP        1|1:53:16       1|1:56:17       1|1:100:25
+8      90361259        rs13273491      T       C       .       PASS    AA=C;DP=73      GT:GQ:DP        1|1:53:16       1|1:56:17       1|1:100:35
+6      106201806       rs6568385       A       G       .       PASS    AA=A;DP=79      GT:GQ:DP        1|1:53:16       1|1:56:17       1|1:100:45
+4      131221606       rs11099032      A       G       .       PASS    AA=G;DP=85      GT:GQ:DP        1|1:53:16       1|1:56:17       1|1:100:51
+15     90268023        rs6496868       A       G       .       PASS    AA=a;DP=88      GT:GQ:DP        1|1:53:16       1|1:56:17       1|1:100:56
+6      108383980       rs9486756       C       A       .       PASS    AA=C;DP=95      GT:GQ:DP        1|1:53:16       1|1:56:22       1|1:100:60
+5      176267837       rs35977534      T       C       .       PASS    AA=C;DP=88      GT:GQ:DP        1|1:53:16       1|1:57:20       1|1:100:50
+13     66856514        rs1173133       T       C       .       PASS    AA=C;DP=106     GT:GQ:DP        1|1:53:16       1|1:58:21       1|1:100:60
+X      12425157        rs1438499       C       T       .       PASS    AA=T;DP=83      GT:GQ:DP        1|1:53:16       1|1:59:18       1|1:100:22
+1      34769000        rs10737381      C       T       .       PASS    AA=N;DP=117;HM2;HM3     GT:GQ:DP        1|1:53:16       1|1:59:19       1|1:100:81
+3      96484075        rs12489010      A       T       .       PASS    AA=T;DP=64      GT:GQ:DP        1|1:53:16       1|1:62:19       1|1:100:21
+5      90482888        rs11745446      T       A       .       PASS    AA=A;DP=78      GT:GQ:DP        1|1:53:16       1|1:62:19       1|1:100:23
+7      24296735        rs6971226       T       C       .       PASS    AA=C;DP=81      GT:GQ:DP        1|1:53:16       1|1:62:19       1|1:100:34
+6      55401878        rs1847121       T       A       .       PASS    AA=A;DP=90      GT:GQ:DP        1|1:53:16       1|1:62:19       1|1:100:54
+3      164216372       rs9290187       G       A       .       PASS    AA=A;DP=75      GT:GQ:DP        1|1:53:16       1|1:62:20       1|1:100:34
+5      29645351        rs10079765      T       C       .       PASS    AA=t;DP=83      GT:GQ:DP        1|1:53:16       1|1:65:20       1|1:100:47
+16     77582085        rs1983096       C       G       .       PASS    AA=G;DP=105     GT:GQ:DP        1|1:53:16       1|1:65:20       1|1:100:73
+13     57239734        rs1334295       G       A       .       PASS    AA=A;DP=72      GT:GQ:DP        1|1:53:16       1|1:65:21       1|1:100:23
+2      125819156       rs313264        C       T       .       PASS    AA=T;DP=75      GT:GQ:DP        1|1:53:16       1|1:65:21       1|1:100:32
+13     78395896        rs1361540       G       A       .       PASS    AA=A;DP=94      GT:GQ:DP        1|1:53:16       1|1:65:21       1|1:100:61
+18     7613395 rs2032177       G       C       .       PASS    AA=C;DP=87      GT:GQ:DP        1|1:53:16       1|1:68:21       1|1:100:47
+3      97649201        rs326253        T       A       .       PASS    AA=A;DP=96      GT:GQ:DP        1|1:53:16       1|1:68:21       1|1:100:58
+6      112069391       rs1794814       T       C       .       PASS    AA=T;DP=99      GT:GQ:DP        1|1:53:16       1|1:68:21       1|1:100:61
+17     14525174        rs11078265      A       G       .       PASS    AA=G;DP=96      GT:GQ:DP        1|1:53:16       1|1:68:22       1|1:100:60
+6      163229325       rs6937725       G       C       .       PASS    AA=C;DP=112     GT:GQ:DP        1|1:53:16       1|1:68:22       1|1:100:74
+X      6574943 rs5989514       A       G       .       PASS    AA=G;DP=111     GT:GQ:DP        1|1:53:16       1|1:71:22       1|1:100:49
+4      66381641        rs4400042       G       C       .       PASS    AA=C;DP=91      GT:GQ:DP        1|1:53:16       1|1:71:22       1|1:100:53
+14     55010087        rs946064        G       A       .       PASS    AA=A;DP=102     GT:GQ:DP        1|1:53:16       1|1:71:22       1|1:100:60
+5      149363434       rs7734382       A       T       .       PASS    AA=T;DP=91      GT:GQ:DP        1|1:53:16       1|1:71:25       1|1:100:44
+X      143567721       rs2815667       A       G       .       PASS    AA=A;DP=114     GT:GQ:DP        1|1:53:16       1|1:71:29       1|1:100:37
+4      126365033       rs9998441       A       G       .       PASS    AA=G;DP=63      GT:GQ:DP        1|1:53:16       1|1:74:26       1|1:100:20
+12     86286495        rs4300470       A       G       .       PASS    AA=A;DP=93      GT:GQ:DP        1|1:53:16       1|1:77:24       1|1:100:51
+6      158694632       rs828007        A       G       .       PASS    AA=A;DP=96      GT:GQ:DP        1|1:53:16       1|1:77:25       1|1:100:54
+2      138205304       rs1596856       T       C       .       PASS    AA=C;DP=83      GT:GQ:DP        1|1:53:16       1|1:77:27       1|1:100:27
+6      55884451        rs2397196       G       A       .       PASS    AA=A;DP=79      GT:GQ:DP        1|1:53:16       1|1:80:26       1|1:100:29
+11     87192230        rs1892898       C       T       .       PASS    AA=C;DP=108     GT:GQ:DP        1|1:53:16       1|1:86:27       1|1:100:68
+18     24729867        rs517373        T       A       .       PASS    AA=A;DP=111     GT:GQ:DP        1|1:53:16       1|1:95:30       1|1:100:64
+3      145599501       rs6802678       A       G       .       PASS    AA=G;DP=120     GT:GQ:DP        1|1:53:17       1|1:19:22       1|1:100:76
+19     61805471        rs10407297      T       C       .       PASS    AA=C;DP=78      GT:GQ:DP        1|1:53:17       1|1:29:10       1|1:100:48
+6      58535905        rs6905062       A       T       .       PASS    AA=A;DP=88      GT:GQ:DP        1|1:53:17       1|1:32:21       1|1:100:48
+17     22424861        rs1521561       T       C       .       PASS    AA=N;DP=113     GT:GQ:DP        1|1:53:17       1|1:37:21       1|1:100:60
+16     15796225        rs8054007       A       G       .       PASS    AA=G;DP=88      GT:GQ:DP        1|1:53:17       1|1:41:12       1|1:100:59
+4      152913833       rs4383600       T       C       .       PASS    AA=C;DP=93      GT:GQ:DP        1|1:53:17       1|1:41:23       1|1:100:49
+11     123448641       rs7127606       A       T       .       PASS    AA=T;DP=70      GT:GQ:DP        1|1:53:17       1|1:44:14       1|1:100:39
+7      39287257        rs12113296      A       G       .       PASS    AA=G;DP=60      GT:GQ:DP        1|1:53:17       1|1:44:17       1|1:73:19
+1      206410870       rs3860297       A       G       .       PASS    AA=G;DP=101;HM2 GT:GQ:DP        1|1:53:17       1|1:50:16       1|1:100:68
+3      159615282       rs4679828       A       T       .       PASS    AA=A;DP=104     GT:GQ:DP        1|1:53:17       1|1:51:21       1|1:100:64
+3      2258897 rs1178524       C       G       .       PASS    AA=G;DP=80      GT:GQ:DP        1|1:53:17       1|1:53:18       1|1:100:42
+X      6752056 rs7058330       A       T       .       PASS    AA=T;DP=84      GT:GQ:DP        1|1:53:17       1|1:56:18       1|1:100:38
+2      180700252       rs5008385       C       A       .       PASS    AA=A;DP=74      GT:GQ:DP        1|1:53:17       1|1:56:21       1|1:100:30
+7      139615822       rs2429209       A       G       .       PASS    AA=A;DP=93      GT:GQ:DP        1|1:53:17       1|1:58:27       1|1:100:38
+4      115211799       rs4311377       A       G       .       PASS    AA=G;DP=100     GT:GQ:DP        1|1:53:17       1|1:59:18       1|1:100:66
+12     76940133        rs2619057       T       C       .       PASS    AA=C;DP=83      GT:GQ:DP        1|1:53:17       1|1:59:19       1|1:100:47
+1      8095956 rs7524424       C       T       .       PASS    AA=T;DP=121;HM2;HM3     GT:GQ:DP        1|1:53:17       1|1:61:25       1|1:100:74
+2      230035015       rs7604082       T       A       .       PASS    AA=A;DP=91      GT:GQ:DP        1|1:53:17       1|1:62:19       1|1:100:56
+4      144148198       rs4690746       A       T       .       PASS    AA=A;DP=73      GT:GQ:DP        1|1:53:17       1|1:62:20       1|1:100:36
+2      169611728       rs2389602       T       C       .       PASS    AA=C;DP=91      GT:GQ:DP        1|1:53:17       1|1:62:20       1|1:100:48
+4      164565282       rs6845148       A       G       .       PASS    AA=a;DP=66      GT:GQ:DP        1|1:53:17       1|1:68:21       1|1:100:22
+7      23153216        rs6955726       A       G       .       PASS    AA=A;DP=72      GT:GQ:DP        1|1:53:17       1|1:68:21       1|1:100:34
+13     18492994        rs7489433       T       C       .       PASS    AA=N;DP=89      GT:GQ:DP        1|1:53:17       1|1:68:22       1|1:100:49
+9      95904277        rs4744316       G       T       .       PASS    AA=T;DP=88      GT:GQ:DP        1|1:53:17       1|1:71:22       1|1:100:50
+9      85801226        rs7021189       C       T       .       PASS    AA=T;DP=127     GT:GQ:DP        1|1:53:17       1|1:82:27       1|1:100:82
+18     63497688        rs2440530       A       G       .       PASS    AA=G;DP=91      GT:GQ:DP        1|1:53:17       1|1:83:26       1|1:100:47
+2      159069810       rs6743236       T       A       .       PASS    AA=A;DP=108     GT:GQ:DP        1|1:53:17       1|1:83:28       1|1:100:64
+6      7471189 rs1324512       T       C       .       PASS    AA=N;DP=113     GT:GQ:DP        1|1:53:18       1|1:44:14       1|1:100:83
+4      111839941       rs1579945       T       A       .       PASS    AA=A;DP=81      GT:GQ:DP        1|1:53:18       1|1:50:15       1|1:100:48
+21     20264006        rs408762        A       G       .       PASS    AA=G;DP=75      GT:GQ:DP        1|1:53:18       1|1:59:18       1|1:100:40
+7      11587915        rs11976743      C       T       .       PASS    AA=T;DP=81      GT:GQ:DP        1|1:53:18       1|1:62:20       1|1:100:30
+8      108524390       rs1654773       C       G       .       PASS    AA=G;DP=100     GT:GQ:DP        1|1:53:18       1|1:68:21       1|1:100:55
+X      138098195       rs6635779       T       C       .       PASS    AA=C;DP=105     GT:GQ:DP        1|1:53:18       1|1:71:22       1|1:100:32
+6      67346211        rs1925799       G       C       .       PASS    AA=C;DP=99      GT:GQ:DP        1|1:53:18       1|1:77:24       1|1:100:59
+2      57584021        rs1401243       A       G       .       PASS    AA=A;DP=81      GT:GQ:DP        1|1:53:18       1|1:80:25       1|1:100:31
+14     100278443       rs2145507       C       T       .       PASS    AA=C;DP=80      GT:GQ:DP        1|1:53:19       1|1:41:17       1|1:100:38
+1      228349330       rs6693579       T       C       .       PASS    AA=C;DP=78      GT:GQ:DP        1|1:53:20       1|1:22:9        1|1:100:47
+7      25406658        rs2058002       C       T       .       PASS    AA=T;DP=97      GT:GQ:DP        1|1:53:20       1|1:59:18       1|1:100:57
+13     92668355        rs320076        C       T       .       PASS    AA=T;DP=94      GT:GQ:DP        1|1:53:20       1|1:62:19       1|1:100:51
+6      32721515        rs9273200       C       T       .       PASS    AA=t;DP=73      GT:GQ:DP        1|1:53:22       0|0:57:19       1|0:54:22
+2      239518982       rs60382945      C       T       .       PASS    AA=C;DP=97      GT:GQ:DP        1|1:53:22       1|0:26:19       1|1:100:56
+14     79108227        rs221418        T       G       .       PASS    AA=G;DP=90      GT:GQ:DP        1|1:53:22       1|1:27:15       1|1:100:51
+18     10241150        rs9960267       A       G       .       PASS    AA=G;DP=102     GT:GQ:DP        1|1:53:22       1|1:42:19       1|1:100:60
+5      102227272       rs6867062       T       C       .       PASS    AA=C;DP=73      GT:GQ:DP        1|1:53:22       1|1:44:13       1|1:100:37
+9      28179170        rs4878818       A       G       .       PASS    AA=G;DP=99      GT:GQ:DP        1|1:53:22       1|1:56:17       1|1:100:61
+11     79444586        rs1944474       C       T       .       PASS    AA=T;DP=110     GT:GQ:DP        1|1:53:24       1|0:100:22      1|1:100:64
+11     126257090       rs4365064       T       C       .       PASS    AA=T;DP=100     GT:GQ:DP        1|1:53:24       1|0:100:24      1|1:100:44
+2      227996998       rs4429466       G       A       .       PASS    AA=A;DP=124     GT:GQ:DP        1|1:53:24       1|0:55:23       1|1:100:71
+2      238694100       rs1867890       C       T       .       PASS    AA=c;DP=112     GT:GQ:DP        1|1:53:25       0|0:36:14       1|0:100:71
+22     21702142        rs6003475       A       G       .       PASS    AA=G;DP=132     GT:GQ:DP        1|1:53:25       0|1:98:29       1|0:100:39
+8      65455609        rs298215        T       G       .       PASS    AA=G;DP=93      GT:GQ:DP        1|1:53:25       1|1:47:15       1|1:100:52
+7      123949622       rs10081216      G       T       .       PASS    AA=T;DP=116     GT:GQ:DP        1|1:53:26       0|1:100:24      1|0:100:64
+5      153622238       rs2443522       T       G       .       PASS    AA=G;DP=117     GT:GQ:DP        1|1:53:26       0|1:43:23       1|0:100:68
+3      141470667       rs6439912       T       C       .       PASS    AA=C;DP=131     GT:GQ:DP        1|1:53:26       1|0:100:27      1|1:100:78
+9      25547683        rs1547700       C       T       .       PASS    AA=T;DP=111     GT:GQ:DP        1|1:53:27       1|1:68:23       1|1:100:56
+7      154827170       rs6973192       C       T       .       PASS    AA=C;DP=142     GT:GQ:DP        1|1:53:28       0|0:47:27       1|0:100:91
+7      86293472        rs2237565       C       T       .       PASS    AA=T;DP=108     GT:GQ:DP        1|1:53:28       1|1:13:12       1|1:100:69
+7      139243767       rs11981804      C       T       .       PASS    AA=c;DP=114     GT:GQ:DP        1|1:53:29       1|0:100:14      1|1:90:30
+6      52822532        rs7747555       A       G       .       PASS    AA=A;DP=122     GT:GQ:DP        1|1:53:29       1|0:100:26      1|1:100:69
+8      12696476        rs7463440       T       G       .       PASS    AA=G;DP=107     GT:GQ:DP        1|1:53:29       1|0:100:29      1|1:100:48
+6      31326963        rs3130427       A       G       .       PASS    AA=N;DP=105     GT:GQ:DP        1|1:53:29       1|0:55:25       1|1:100:51
+16     87099557        rs12926163      T       C       .       PASS    AA=C;DP=91      GT:GQ:DP        1|1:53:29       1|0:68:15       1|1:100:47
+10     118547497       rs1621857       C       T       .       PASS    AA=c;DP=140     GT:GQ:DP        1|1:53:29       1|0:78:15       1|1:100:51
+15     69719888        rs1501420       G       T       .       PASS    AA=T;DP=97      GT:GQ:DP        1|1:53:29       1|0:98:17       1|1:100:52
+9      109554265       rs944174        G       C       .       PASS    AA=g;DP=118     GT:GQ:DP        1|1:53:29       1|1:59:18       1|1:100:59
+13     105433437       rs2251995       T       C       .       PASS    AA=T;DP=112     GT:GQ:DP        1|1:53:30       0|1:59:20       1|0:100:60
+18     68125821        rs10782048      A       G       .       PASS    AA=G;DP=106     GT:GQ:DP        1|1:53:30       1|1:53:17       1|1:100:56
+7      89630186        rs39286 A       C       .       PASS    AA=N;DP=96      GT:GQ:DP        1|1:53:30       1|1:56:17       1|1:100:50
+6      48329216        rs2456920       C       T       .       PASS    AA=T;DP=121     GT:GQ:DP        1|1:53:31       0|0:39:13       1|0:100:78
+1      243278553       rs2786685       T       C       .       PASS    AA=T;DP=117     GT:GQ:DP        1|1:53:31       0|0:48:17       1|0:100:70
+8      23168607        rs3736025       C       T       .       PASS    AA=C;DP=123     GT:GQ:DP        1|1:53:31       0|0:54:18       1|0:100:75
+2      98724453        .       A       T       .       PASS    AA=A;DP=130     GT:GQ:DP        1|1:53:31       0|0:66:23       1|0:100:79
+2      135614226       .       A       C       .       PASS    AA=A;DP=130     GT:GQ:DP        1|1:53:31       0|0:77:34       1|0:100:65
+1      168352213       rs573112        G       A       .       PASS    AA=A;DP=99;HM2  GT:GQ:DP        1|1:53:31       1|1:47:16       1|1:100:41
+14     100400287       rs1950622       G       A       .       PASS    AA=A;DP=138     GT:GQ:DP        1|1:53:32       0|1:100:29      1|0:100:76
+11     15013644        .       C       T       .       PASS    AA=C;DP=101     GT:GQ:DP        1|1:53:34       0|0:39:13       1|0:100:48
+2      182199181       rs6719318       C       T       .       PASS    AA=C;DP=77      GT:GQ:DP        1|1:54:18       1|0:100:15      1|1:100:45
+12     65995657        rs7137520       C       T       .       PASS    AA=c;DP=55      GT:GQ:DP        1|1:54:18       1|0:100:15      1|1:63:21
+X      111571383       rs6568046       C       A       .       PASS    AA=A;DP=88      GT:GQ:DP        1|1:54:18       1|0:100:17      1|1:84:28
+2      11600901        rs7558961       T       C       .       PASS    AA=C;DP=85      GT:GQ:DP        1|1:54:18       1|0:100:18      1|1:100:49
+13     54668785        rs4421885       G       A       .       PASS    AA=G;DP=79      GT:GQ:DP        1|1:54:18       1|0:100:18      1|1:80:42
+9      93555386        rs4585802       G       A       .       PASS    AA=A;DP=115     GT:GQ:DP        1|1:54:18       1|0:100:19      1|1:100:34
+3      40435771        rs13324109      T       C       .       PASS    AA=T;DP=90      GT:GQ:DP        1|1:54:18       1|0:100:19      1|1:100:53
+6      161089729       rs783178        C       T       .       PASS    AA=.;DP=84      GT:GQ:DP        1|1:54:18       1|0:100:19      1|1:63:46
+4      76488585        rs2047097       C       T       .       PASS    AA=T;DP=84      GT:GQ:DP        1|1:54:18       1|0:100:19      1|1:93:44
+X      93426589        rs12353607      C       T       .       PASS    AA=C;DP=107     GT:GQ:DP        1|1:54:18       1|0:100:21      1|1:100:37
+2      227626390       rs4350744       A       T       .       PASS    AA=T;DP=99      GT:GQ:DP        1|1:54:18       1|0:100:22      1|1:100:59
+5      20220336        rs2063227       T       C       .       PASS    AA=C;DP=109     GT:GQ:DP        1|1:54:18       1|0:100:22      1|1:100:67
+4      37156457        rs2973243       G       C       .       PASS    AA=G;DP=92      GT:GQ:DP        1|1:54:18       1|0:100:22      1|1:71:53
+1      228771976       rs11122540      C       T       .       PASS    AA=c;DP=86      GT:GQ:DP        1|1:54:18       1|0:100:22      1|1:84:37
+7      14200839        rs10240641      A       G       .       PASS    AA=A;DP=79      GT:GQ:DP        1|1:54:18       1|0:100:22      1|1:94:38
+17     47427662        rs203044        T       C       .       PASS    AA=T;DP=83      GT:GQ:DP        1|1:54:18       1|0:100:23      1|1:62:32
+7      69793101        rs6978392       A       G       .       PASS    AA=G;DP=78      GT:GQ:DP        1|1:54:18       1|0:100:23      1|1:78:26
+5      7042281 rs13159689      C       T       .       PASS    AA=C;DP=109     GT:GQ:DP        1|1:54:18       1|0:100:24      1|1:100:69
+15     25828872        rs2594913       A       G       .       PASS    AA=G;DP=90      GT:GQ:DP        1|1:54:18       1|0:100:25      1|1:100:47
+11     44161099        rs2863053       A       C       .       PASS    AA=C;DP=101     GT:GQ:DP        1|1:54:18       1|0:100:26      1|1:100:56
+9      75431703        rs275511        C       T       .       PASS    AA=T;DP=95      GT:GQ:DP        1|1:54:18       1|0:100:27      1|1:100:50
+6      97370086        rs6568611       A       T       .       PASS    AA=T;DP=122     GT:GQ:DP        1|1:54:18       1|0:100:27      1|1:100:78
+7      85893715        rs13362864      A       T       .       PASS    AA=A;DP=93      GT:GQ:DP        1|1:54:18       1|0:100:27      1|1:89:46
+4      73431589        rs1369090       A       T       .       PASS    AA=T;DP=93      GT:GQ:DP        1|1:54:18       1|0:100:29      1|1:100:47
+6      8290006 rs7771617       G       A       .       PASS    AA=G;DP=122     GT:GQ:DP        1|1:54:18       1|0:100:29      1|1:100:78
+6      98423600        rs9387768       A       G       .       PASS    AA=G;DP=103     GT:GQ:DP        1|1:54:18       1|0:100:31      1|1:100:56
+4      117408287       rs4326081       A       G       .       PASS    AA=-;DP=80      GT:GQ:DP        1|1:54:18       1|0:43:13       1|1:100:50
+5      167688564       rs2337214       G       A       .       PASS    AA=A;DP=106     GT:GQ:DP        1|1:54:18       1|0:52:18       1|1:100:75
+14     79587663        rs10132618      T       C       .       PASS    AA=C;DP=86      GT:GQ:DP        1|1:54:18       1|0:66:15       1|1:87:52
+12     130182663       .       C       T       .       PASS    AA=C;DP=92      GT:GQ:DP        1|1:54:18       1|0:66:18       1|1:100:44
+10     568276  rs60836082      T       C       .       PASS    AA=t;DP=70      GT:GQ:DP        1|1:54:18       1|0:68:13       1|1:100:38
+3      79671335        rs9863788       A       G       .       PASS    AA=A;DP=69      GT:GQ:DP        1|1:54:18       1|0:98:15       1|1:46:26
+5      8733584 rs199184        C       T       .       PASS    AA=T;DP=76      GT:GQ:DP        1|1:54:19       0|1:100:14      1|0:100:40
+6      134230530       rs7748433       C       T       .       PASS    AA=T;DP=74      GT:GQ:DP        1|1:54:19       0|1:100:14      1|0:100:41
+13     57170071        rs9569727       C       A       .       PASS    AA=C;DP=63      GT:GQ:DP        1|1:54:19       0|1:100:16      1|0:100:21
+4      29682115        .       G       A       .       PASS    AA=G;DP=84      GT:GQ:DP        1|1:54:19       0|1:100:16      1|0:100:50
+4      21271514        rs4697226       T       C       .       PASS    AA=t;DP=93      GT:GQ:DP        1|1:54:19       0|1:100:18      1|0:100:58
+11     70075271        rs6592623       C       T       .       PASS    AA=C;DP=88      GT:GQ:DP        1|1:54:19       0|1:100:19      1|0:100:37
+16     4068844 rs12596300      G       A       .       PASS    AA=A;DP=99      GT:GQ:DP        1|1:54:19       0|1:100:19      1|0:100:63
+1      217898661       rs7545431       C       A       .       PASS    AA=t;DP=107;HM2;HM3     GT:GQ:DP        1|1:54:19       0|1:100:20      1|0:100:69
+2      194439874       rs10194007      A       T       .       PASS    AA=t;DP=94      GT:GQ:DP        1|1:54:19       0|1:100:22      1|0:100:54
+4      188897629       rs6825537       C       T       .       PASS    AA=T;DP=107     GT:GQ:DP        1|1:54:19       0|1:100:23      1|0:100:65
+5      128606817       rs28673789      T       C       .       PASS    AA=C;DP=103     GT:GQ:DP        1|1:54:19       0|1:100:26      1|0:100:60
+14     100208259       .       C       T       .       PASS    AA=C;DP=111     GT:GQ:DP        1|1:54:19       0|1:100:26      1|0:100:65
+5      24997636        rs1186389       C       T       .       PASS    AA=T;DP=98      GT:GQ:DP        1|1:54:19       0|1:100:29      1|0:100:50
+4      92449015        rs10029578      G       A       .       PASS    AA=A;DP=100     GT:GQ:DP        1|1:54:19       0|1:100:30      1|0:100:39
+22     33040252        rs5749787       T       C       .       PASS    AA=T;DP=112     GT:GQ:DP        1|1:54:19       0|1:100:31      1|0:100:66
+2      33530054        rs12999445      G       C       .       PASS    AA=C;DP=107     GT:GQ:DP        1|1:54:19       0|1:33:23       1|0:100:67
+6      118058403       rs1501474       T       G       .       PASS    AA=G;DP=114     GT:GQ:DP        1|1:54:19       0|1:41:20       1|0:100:76
+12     38397955        rs7964435       T       C       .       PASS    AA=T;DP=126     GT:GQ:DP        1|1:54:19       0|1:63:31       1|0:100:78
+5      161869963       rs10065652      A       C       .       PASS    AA=C;DP=98      GT:GQ:DP        1|1:54:19       0|1:70:18       1|0:100:60
+19     11719484        rs10408153      A       G       .       PASS    AA=a;DP=100     GT:GQ:DP        1|1:54:19       0|1:71:26       1|0:100:54
+7      83012299        rs1639309       A       G       .       PASS    AA=G;DP=93      GT:GQ:DP        1|1:54:19       0|1:77:25       1|0:100:50
+3      127435044       rs12695482      C       T       .       PASS    AA=T;DP=83      GT:GQ:DP        1|1:54:19       0|1:87:14       1|0:100:50
+2      220722915       rs10165195      A       T       .       PASS    AA=T;DP=89      GT:GQ:DP        1|1:54:19       0|1:95:16       1|0:100:53
+2      142108807       rs355600        T       G       .       PASS    AA=T;DP=94      GT:GQ:DP        1|1:54:19       0|1:96:19       1|0:100:59
+9      128727353       rs2935991       G       A       .       PASS    AA=A;DP=104     GT:GQ:DP        1|1:54:19       0|1:97:14       1|0:100:70
+5      30131171        rs4446472       T       A       .       PASS    AA=A;DP=96      GT:GQ:DP        1|1:54:19       1|0:100:23      1|1:100:55
+2      36778069        rs6722903       A       G       .       PASS    AA=A;DP=111     GT:GQ:DP        1|1:54:19       1|0:100:25      1|1:100:66
+4      171649780       rs2135899       T       C       .       PASS    AA=C;DP=113     GT:GQ:DP        1|1:54:19       1|0:100:28      1|1:100:67
+4      23942383        rs4697057       A       G       .       PASS    AA=G;DP=119     GT:GQ:DP        1|1:54:19       1|0:100:33      1|1:100:68
+6      150288786       rs7738773       C       T       .       PASS    AA=-;DP=64      GT:GQ:DP        1|1:54:19       1|0:13:10       1|1:59:35
+6      133195335       rs7768634       G       C       .       PASS    AA=C;DP=82      GT:GQ:DP        1|1:54:19       1|0:65:13       1|1:100:47
+2      116944960       rs13418398      A       G       .       PASS    AA=G;DP=104     GT:GQ:DP        1|1:54:19       1|0:80:16       1|1:100:69
+1      90975839        rs6689362       T       A       .       PASS    AA=t;DP=91;HM2  GT:GQ:DP        1|1:54:20       0|1:100:14      1|0:100:55
+16     76873136        rs9924232       A       G       .       PASS    AA=A;DP=82      GT:GQ:DP        1|1:54:20       0|1:100:15      1|0:100:38
+15     51242176        rs1508027       T       C       .       PASS    AA=C;DP=121     GT:GQ:DP        1|1:54:20       0|1:100:21      1|0:100:67
+12     73535918        rs12309893      A       G       .       PASS    AA=A;DP=90      GT:GQ:DP        1|1:54:20       0|1:100:23      1|0:100:48
+3      84798898        rs4374542       A       G       .       PASS    AA=G;DP=111     GT:GQ:DP        1|1:54:20       0|1:100:23      1|0:100:69
+10     4833281 rs2961601       G       T       .       PASS    AA=T;DP=114     GT:GQ:DP        1|1:54:20       0|1:100:24      1|0:100:68
+4      34477512        rs11933741      G       C       .       PASS    AA=C;DP=107     GT:GQ:DP        1|1:54:20       0|1:100:30      1|0:100:58
+15     45520737        rs12439443      G       A       .       PASS    AA=A;DP=132     GT:GQ:DP        1|1:54:20       0|1:100:30      1|0:100:70
+2      151356037       rs2158818       C       G       .       PASS    AA=G;DP=88      GT:GQ:DP        1|1:54:20       0|1:32:18       1|0:100:46
+12     25007030        rs2645912       G       T       .       PASS    AA=T;DP=107     GT:GQ:DP        1|1:54:20       0|1:75:21       1|0:100:64
+10     66165884        rs4400687       A       G       .       PASS    AA=A;DP=79      GT:GQ:DP        1|1:54:20       0|1:80:18       1|0:100:41
+6      56311863        rs6935231       A       G       .       PASS    AA=G;DP=117     GT:GQ:DP        1|1:54:20       1|0:85:14       1|1:100:86
+3      41705115        rs7624877       T       C       .       PASS    AA=C;DP=109     GT:GQ:DP        1|1:54:21       0|1:100:29      1|0:100:55
+8      111707036       rs11991686      C       T       .       PASS    AA=C;DP=78      GT:GQ:DP        1|1:54:21       0|1:56:14       1|0:100:46
+1      10338499        rs2185252       T       C       .       PASS    AA=T;DP=96;HM3  GT:GQ:DP        1|1:54:21       0|1:82:15       1|0:100:61
+1      72517166        rs12084329      T       C       .       PASS    AA=C;DP=77;HM2  GT:GQ:DP        1|1:54:21       1|0:56:17       1|1:78:27
+16     843427  rs7188051       G       A       .       PASS    AA=A;DP=82      GT:GQ:DP        1|1:54:21       1|1:23:6        1|1:100:51
+X      26428243        rs5944484       A       G       .       PASS    AA=G;DP=89      GT:GQ:DP        1|1:54:21       1|1:62:22       1|1:100:33
+19     41372395        rs1974843       T       A       .       PASS    AA=t;DP=93      GT:GQ:DP        1|1:54:21       1|1:67:28       1|1:100:32
+7      93766656        rs6465407       G       C       .       PASS    AA=C;DP=124     GT:GQ:DP        1|1:54:22       0|1:100:31      1|0:100:69
+8      18036321        rs10093224      A       G       .       PASS    AA=.;DP=135     GT:GQ:DP        1|1:54:22       1|1:67:28       1|1:100:89
+7      39467046        rs740510        G       A       .       PASS    AA=G;DP=101     GT:GQ:DP        1|1:54:23       0|0:39:19       1|0:100:61
+8      85239826        rs893282        C       T       .       PASS    AA=T;DP=103     GT:GQ:DP        1|1:54:23       1|0:70:11       1|1:100:70
+2      164100634       rs4542864       G       A       .       PASS    AA=A;DP=79      GT:GQ:DP        1|1:54:23       1|1:18:9        1|1:100:48
+15     96469488        rs7162873       G       C       .       PASS    AA=C;DP=105     GT:GQ:DP        1|1:54:23       1|1:53:16       1|1:100:66
+2      69505963        rs7574839       C       T       .       PASS    AA=T;DP=98      GT:GQ:DP        1|1:54:23       1|1:62:19       1|1:100:52
+10     101329488       rs6584293       G       C       .       PASS    AA=G;DP=105     GT:GQ:DP        1|1:54:24       0|0:33:11       1|0:100:73
+1      82504110        rs6678104       T       G       .       PASS    AA=T;DP=102     GT:GQ:DP        1|1:54:24       1|0:100:19      1|1:95:48
+15     29475990        rs4613031       C       T       .       PASS    AA=C;DP=92      GT:GQ:DP        1|1:54:24       1|1:32:20       1|1:100:49
+14     92422303        rs11160093      T       C       .       PASS    AA=C;DP=115     GT:GQ:DP        1|1:54:24       1|1:32:20       1|1:100:72
+6      54824143        rs12210299      C       T       .       PASS    AA=T;DP=112     GT:GQ:DP        1|1:54:24       1|1:35:19       1|1:100:29
+2      103863513       rs6543233       A       G       .       PASS    AA=G;DP=126     GT:GQ:DP        1|1:54:24       1|1:70:36       1|1:100:66
+4      65801099        rs28718680      C       G       .       PASS    AA=C;DP=90      GT:GQ:DP        1|1:54:25       0|0:51:17       1|0:100:48
+1      49046165        rs1934367       T       A       .       PASS    AA=A;DP=119;HM2;HM3     GT:GQ:DP        1|1:54:25       0|1:100:22      1|0:100:77
+12     57999379        rs12816795      T       C       .       PASS    AA=T;DP=115     GT:GQ:DP        1|1:54:25       0|1:99:26       1|0:100:65
+4      54764574        rs4864842       G       A       .       PASS    AA=G;DP=107     GT:GQ:DP        1|1:54:25       1|0:23:12       1|1:100:70
+3      128402647       rs6794336       T       C       .       PASS    AA=t;DP=109     GT:GQ:DP        1|1:54:25       1|1:41:13       1|1:100:70
+10     116713988       rs6585307       T       C       .       PASS    AA=t;DP=116     GT:GQ:DP        1|1:54:26       0|1:100:29      1|0:100:63
+3      170512478       rs10936576      T       C       .       PASS    AA=T;DP=107     GT:GQ:DP        1|1:54:26       0|1:24:9        1|0:100:71
+16     48492562        rs12446039      T       C       .       PASS    AA=C;DP=130     GT:GQ:DP        1|1:54:26       0|1:27:11       1|0:100:92
+2      223726855       rs7570484       T       C       .       PASS    AA=T;DP=129     GT:GQ:DP        1|1:54:27       0|1:46:29       1|0:100:71
+21     32892160        rs1782960       C       G       .       PASS    AA=G;DP=112     GT:GQ:DP        1|1:54:27       1|0:100:16      1|1:100:63
+4      107526472       rs3018076       C       T       .       PASS    AA=C;DP=106     GT:GQ:DP        1|1:54:27       1|0:39:12       1|1:100:62
+8      139145096       rs4263803       C       A       .       PASS    AA=A;DP=122     GT:GQ:DP        1|1:54:27       1|0:56:18       1|1:100:76
+4      186868822       rs1566352       T       C       .       PASS    AA=N;DP=108     GT:GQ:DP        1|1:54:27       1|1:13:12       1|1:100:70
+1      26025253        rs6598923       T       C       .       PASS    AA=T;DP=96      GT:GQ:DP        1|1:54:27       1|1:32:9        1|1:100:62
+10     73074535        rs12570148      A       G       .       PASS    AA=A;DP=99      GT:GQ:DP        1|1:54:29       0|0:42:14       1|0:100:43
+10     32588576        rs2479356       A       G       .       PASS    AA=G;DP=119     GT:GQ:DP        1|1:54:29       0|1:61:28       1|0:100:63
+8      95789306        rs7460444       T       A       .       PASS    AA=T;DP=77      GT:GQ:DP        1|1:54:29       1|1:5:6 1|1:28:43
+3      107145327       rs1566804       C       T       .       PASS    AA=C;DP=122     GT:GQ:DP        1|1:54:29       1|1:98:31       1|1:100:63
+1      74783283        rs6604870       A       G       .       PASS    AA=G;DP=113;HM2;HM3     GT:GQ:DP        1|1:54:32       1|1:39:20       1|1:100:62
+2      236781141       rs7557124       C       T       .       PASS    AA=T;DP=101     GT:GQ:DP        1|1:54:32       1|1:43:18       1|1:100:52
+6      130699411       rs4897413       A       C       .       PASS    AA=C;DP=136     GT:GQ:DP        1|1:54:32       1|1:50:32       1|1:100:73
+12     9721876 rs11052367      A       G       .       PASS    AA=G;DP=77      GT:GQ:DP        1|1:55:17       1|1:14:13       1|1:100:36
+13     62975133        rs1855247       T       C       .       PASS    AA=T;DP=97      GT:GQ:DP        1|1:55:17       1|1:47:15       1|1:100:62
+16     28131144        rs28678209      T       C       .       PASS    AA=C;DP=85      GT:GQ:DP        1|1:55:18       1|1:14:6        1|1:100:61
+4      64270344        .       A       T       .       PASS    AA=A;DP=84      GT:GQ:DP        1|1:55:20       0|0:22:18       1|0:100:46
+1      233239392       rs61836804      T       C       .       PASS    AA=N;DP=87      GT:GQ:DP        1|1:55:20       0|0:23:16       1|0:100:41
+19     41122638        rs1057265       A       G       .       PASS    AA=G;DP=86      GT:GQ:DP        1|1:55:20       0|0:30:11       1|0:100:55
+3      25333515        rs61678814      T       G       .       PASS    AA=T;DP=97      GT:GQ:DP        1|1:55:20       0|0:31:18       1|0:100:59
+11     61287031        .       G       A       .       PASS    AA=G;DP=84      GT:GQ:DP        1|1:55:20       0|0:33:11       1|0:100:44
+6      136043449       rs9494329       A       G       .       PASS    AA=A;DP=79      GT:GQ:DP        1|1:55:20       0|0:39:13       1|0:100:46
+6      117962441       rs17079332      T       C       .       PASS    AA=C;DP=89      GT:GQ:DP        1|1:55:20       0|0:39:13       1|0:100:58
+6      67739547        .       C       G       .       PASS    AA=C;DP=75      GT:GQ:DP        1|1:55:20       0|0:39:14       1|0:100:40
+3      27413000        rs885001        A       G       .       PASS    AA=A;DP=76      GT:GQ:DP        1|1:55:20       0|0:45:15       1|0:100:31
+4      162140862       rs12508741      T       C       .       PASS    AA=T;DP=79      GT:GQ:DP        1|1:55:20       0|0:45:15       1|0:100:42
+11     39945627        rs7121041       A       C       .       PASS    AA=C;DP=86      GT:GQ:DP        1|1:55:20       0|0:45:15       1|0:100:53
+X      14793869        rs5935816       G       A       .       PASS    AA=G;DP=79      GT:GQ:DP        1|1:55:20       0|0:45:15       1|0:66:24
+4      162610795       rs4691767       T       G       .       PASS    AA=G;DP=85      GT:GQ:DP        1|1:55:20       0|0:48:16       1|0:100:49
+5      58519051        rs28540859      G       T       .       PASS    AA=G;DP=95      GT:GQ:DP        1|1:55:20       0|0:48:16       1|0:100:56
+1      188333365       rs1935880       G       A       .       PASS    AA=A;DP=76;HM2;HM3      GT:GQ:DP        1|1:55:20       0|0:48:17       1|0:100:38
+3      29888988        rs9866059       T       C       .       PASS    AA=C;DP=90      GT:GQ:DP        1|1:55:20       0|0:48:17       1|0:100:52
+1      177080154       rs3766642       G       A       .       PASS    AA=A;DP=100;HM2;HM3     GT:GQ:DP        1|1:55:20       0|0:48:18       1|0:100:61
+X      43546113        .       C       T       .       PASS    AA=C;DP=109     GT:GQ:DP        1|1:55:20       0|0:48:22       1|0:100:36
+8      37582976        .       A       G       .       PASS    AA=A;DP=96      GT:GQ:DP        1|1:55:20       0|0:54:18       1|0:100:59
+21     16749508        rs2823816       A       T       .       PASS    AA=A;DP=67      GT:GQ:DP        1|1:55:20       0|0:54:19       1|0:100:24
+2      173150847       rs11897165      T       G       .       PASS    AA=T;DP=79      GT:GQ:DP        1|1:55:20       0|0:57:19       1|0:100:33
+18     26304545        rs1160477       A       G       .       PASS    AA=A;DP=99      GT:GQ:DP        1|1:55:20       0|0:57:19       1|0:100:56
+1      198866322       rs4448543       G       A       .       PASS    AA=G;DP=107;HM2 GT:GQ:DP        1|1:55:20       0|0:57:19       1|0:100:67
+8      52417210        rs972026        T       G       .       PASS    AA=T;DP=108     GT:GQ:DP        1|1:55:20       0|0:57:19       1|0:100:69
+7      144202675       rs4428592       A       G       .       PASS    AA=G;DP=94      GT:GQ:DP        1|1:55:20       0|0:57:20       1|0:100:57
+16     85463066        rs8050596       A       G       .       PASS    AA=A;DP=112     GT:GQ:DP        1|1:55:20       0|0:57:20       1|0:100:71
+8      122895523       rs6981911       G       T       .       PASS    AA=G;DP=81      GT:GQ:DP        1|1:55:20       0|0:60:20       1|0:100:41
+17     16812868        .       T       C       .       PASS    AA=T;DP=84      GT:GQ:DP        1|1:55:20       0|0:60:21       1|0:100:42
+14     26860670        rs427668        T       A       .       PASS    AA=T;DP=100     GT:GQ:DP        1|1:55:20       0|0:63:21       1|0:100:52
+3      118236210       rs10934378      C       T       .       PASS    AA=C;DP=100     GT:GQ:DP        1|1:55:20       0|0:66:22       1|0:100:58
+X      36457980        rs16998563      T       C       .       PASS    AA=T;DP=92      GT:GQ:DP        1|1:55:20       0|0:66:23       1|0:100:26
+2      136956774       rs2033172       A       G       .       PASS    AA=A;DP=107     GT:GQ:DP        1|1:55:20       0|0:69:24       1|0:100:65
+20     50692038        rs856412        C       A       .       PASS    AA=A;DP=121     GT:GQ:DP        1|1:55:20       0|0:72:24       1|0:100:77
+1      243898447       rs6678276       G       A       .       PASS    AA=G;DP=114;HM2 GT:GQ:DP        1|1:55:20       0|0:72:25       1|0:100:70
+5      166951302       rs278015        G       A       .       PASS    AA=A;DP=119     GT:GQ:DP        1|1:55:20       0|0:78:26       1|0:100:74
+11     24733662        rs56350467      C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        1|1:55:20       0|0:78:28       1|0:100:74
+3      1909398 rs1906638       A       G       .       PASS    AA=G;DP=106     GT:GQ:DP        1|1:55:20       0|0:81:27       1|0:100:62
+15     31694063        rs1472305       G       A       .       PASS    AA=A;DP=110     GT:GQ:DP        1|1:55:20       0|0:81:28       1|0:100:63
+11     57789638        rs7122030       A       G       .       PASS    AA=G;DP=90      GT:GQ:DP        1|1:55:20       0|0:84:28       1|0:100:42
+X      119451046       rs42886 A       G       .       PASS    AA=G;DP=134     GT:GQ:DP        1|1:55:20       0|0:85:31       1|0:100:41
+21     15955310        rs7276311       C       T       .       PASS    AA=T;DP=94      GT:GQ:DP        1|1:55:20       0|0:90:30       1|0:100:42
+7      77919523        rs4319010       T       A       .       PASS    AA=T;DP=117     GT:GQ:DP        1|1:55:20       0|0:90:30       1|0:100:68
+7      154701917       rs60535505      T       C       .       PASS    AA=T;DP=147     GT:GQ:DP        1|1:55:20       0|0:93:31       1|0:100:78
+13     97226580        rs1772369       A       C       .       PASS    AA=C;DP=111     GT:GQ:DP        1|1:55:20       0|0:93:32       1|0:100:58
+7      103795712       .       C       A       .       PASS    AA=C;DP=142     GT:GQ:DP        1|1:55:20       0|0:96:39       1|0:100:82
+5      172574976       rs55884259      G       A       .       PASS    AA=A;DP=105     GT:GQ:DP        1|1:55:20       1|1:25:22       1|1:100:68
+X      110588485       rs7064199       C       T       .       PASS    AA=C;DP=127     GT:GQ:DP        1|1:55:21       0|0:100:34      1|0:100:41
+2      123481511       rs2135886       G       A       .       PASS    AA=A;DP=79      GT:GQ:DP        1|1:55:21       0|0:30:16       1|0:100:42
+5      96966538        rs7725536       A       C       .       PASS    AA=A;DP=85      GT:GQ:DP        1|1:55:21       0|0:33:11       1|0:100:53
+12     70028257        rs7486773       G       C       .       PASS    AA=G;DP=100     GT:GQ:DP        1|1:55:21       0|0:45:15       1|0:100:64
+16     64805379        rs9931716       T       C       .       PASS    AA=T;DP=102     GT:GQ:DP        1|1:55:21       0|0:51:20       1|0:100:60
+9      102702801       rs1330189       A       C       .       PASS    AA=C;DP=91      GT:GQ:DP        1|1:55:21       0|0:54:18       1|0:100:52
+11     24512258        rs11027984      C       T       .       PASS    AA=C;DP=95      GT:GQ:DP        1|1:55:21       0|0:55:21       1|0:100:54
+6      161978721       rs12199909      T       G       .       PASS    AA=T;DP=86      GT:GQ:DP        1|1:55:21       0|0:57:19       1|0:100:33
+8      90764337        .       T       C       .       PASS    AA=C;DP=95      GT:GQ:DP        1|1:55:21       0|0:57:22       1|0:100:43
+13     32963242        rs8001546       A       C       .       PASS    AA=A;DP=122     GT:GQ:DP        1|1:55:21       0|0:57:24       1|0:100:68
+1      236850668       rs6685814       A       G       .       PASS    AA=A;DP=110;HM2 GT:GQ:DP        1|1:55:21       0|0:66:28       1|0:100:61
+5      60598397        rs10044874      A       G       .       PASS    AA=A;DP=138     GT:GQ:DP        1|1:55:21       0|0:99:33       1|0:100:74
+6      54532339        rs9370315       G       A       .       PASS    AA=g;DP=89      GT:GQ:DP        1|1:55:22       0|0:38:20       1|0:100:46
+9      137666714       rs11103112      T       A       .       PASS    AA=t;DP=114     GT:GQ:DP        1|1:55:22       0|0:54:18       1|0:100:36
+14     91624521        rs7155310       A       G       .       PASS    AA=A;DP=123     GT:GQ:DP        1|1:55:22       0|0:81:27       1|0:100:72
+4      8579790 rs3103081       T       C       .       PASS    AA=C;DP=89      GT:GQ:DP        1|1:55:22       1|1:41:12       1|1:100:45
+2      56224935        rs4672091       G       A       .       PASS    AA=A;DP=110     GT:GQ:DP        1|1:55:23       1|1:53:17       1|1:100:72
+6      32628049        .       A       G       .       PASS    AA=-;DP=87      GT:GQ:DP        1|1:55:24       0|1:59:14       1|0:100:48
+11     68352546        rs10896369      G       A       .       PASS    AA=G;DP=102     GT:GQ:DP        1|1:55:24       1|0:46:12       1|1:100:66
+8      104126241       rs2458283       C       A       .       PASS    AA=A;DP=82      GT:GQ:DP        1|1:55:24       1|1:62:19       1|1:100:40
+7      109372005       rs12705654      C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        1|1:55:24       1|1:68:21       1|1:100:64
+11     23028658        rs11026938      T       G       .       PASS    AA=G;DP=95      GT:GQ:DP        1|1:55:26       1|1:31:18       1|1:100:51
+12     15644657        .       G       A       .       PASS    AA=G;DP=120     GT:GQ:DP        1|1:55:27       0|0:69:26       1|0:100:29
+4      7244075 rs11942845      A       C       .       PASS    AA=C;DP=113     GT:GQ:DP        1|1:55:27       0|1:68:15       1|0:100:73
+12     100246424       rs7314205       A       G       .       PASS    AA=G;DP=127     GT:GQ:DP        1|1:55:27       1|1:35:22       1|1:100:35
+7      66443443        rs887710        A       C       .       PASS    AA=.;DP=116     GT:GQ:DP        1|1:55:27       1|1:46:25       1|1:100:69
+15     79984996        rs1389379       T       G       .       PASS    AA=G;DP=120     GT:GQ:DP        1|1:55:27       1|1:62:20       1|1:100:69
+21     17723616        rs7280573       A       T       .       PASS    AA=T;DP=136     GT:GQ:DP        1|1:55:28       0|1:100:25      1|0:100:86
+2      170855124       rs13007603      G       A       .       PASS    AA=G;DP=106     GT:GQ:DP        1|1:55:28       1|1:27:18       1|1:100:58
+3      164343186       rs4399900       T       A       .       PASS    AA=A;DP=78      GT:GQ:DP        1|1:55:28       1|1:27:18       1|1:96:23
+2      26801294        rs1275921       C       A       .       PASS    AA=A;DP=90      GT:GQ:DP        1|1:55:28       1|1:29:8        1|1:100:55
+4      188112334       rs1991255       G       A       .       PASS    AA=A;DP=99      GT:GQ:DP        1|1:55:28       1|1:32:18       1|1:100:43
+1      11917996        rs760188        A       G       .       PASS    AA=A;DP=87      GT:GQ:DP        1|1:55:28       1|1:32:9        1|1:100:42
+10     126210824       rs7922543       T       G       .       PASS    AA=T;DP=101     GT:GQ:DP        1|1:55:28       1|1:38:11       1|1:100:65
+6      21726895        rs1744850       T       G       .       PASS    AA=g;DP=92      GT:GQ:DP        1|1:55:28       1|1:38:12       1|1:100:53
+4      115996061       rs4834446       A       C       .       PASS    AA=C;DP=100     GT:GQ:DP        1|1:55:28       1|1:40:27       1|1:100:45
+10     113395121       rs1336413       A       G       .       PASS    AA=G;DP=92      GT:GQ:DP        1|1:55:28       1|1:50:17       1|1:100:35
+1      159978415       rs2066247       T       G       .       PASS    AA=G;DP=83;HM2;HM3      GT:GQ:DP        1|1:55:28       1|1:53:16       1|1:100:38
+10     22912765        rs34786070      C       G       .       PASS    AA=G;DP=91      GT:GQ:DP        1|1:55:28       1|1:56:17       1|1:100:40
+6      45637955        rs4714861       C       A       .       PASS    AA=A;DP=115     GT:GQ:DP        1|1:55:28       1|1:67:27       1|1:100:59
+2      64459900        rs2288301       T       G       .       PASS    AA=N;DP=125     GT:GQ:DP        1|1:55:28       1|1:68:21       1|1:100:77
+20     57013463        rs163803        T       C       .       PASS    AA=C;DP=122     GT:GQ:DP        1|1:55:28       1|1:71:22       1|1:100:73
+17     45961734        rs4793660       G       A       .       PASS    AA=G;DP=110     GT:GQ:DP        1|1:55:28       1|1:74:23       1|1:100:45
+9      22703035        rs688066        T       C       .       PASS    AA=C;DP=103     GT:GQ:DP        1|1:55:28       1|1:83:26       1|1:100:50
+6      73230235        rs4707969       A       G       .       PASS    AA=a;DP=136     GT:GQ:DP        1|1:55:28       1|1:86:28       1|1:100:81
+18     957406  .       T       G       .       PASS    AA=T;DP=131     GT:GQ:DP        1|1:55:29       0|1:87:21       1|0:100:82
+18     73370656        rs6565994       G       C       .       PASS    AA=C;DP=130     GT:GQ:DP        1|1:55:29       1|1:65:20       1|1:100:80
+3      137244707       rs7621425       A       G       .       PASS    AA=A;DP=103     GT:GQ:DP        1|1:55:30       0|0:69:23       1|0:100:52
+19     14243654        rs547078        G       A       .       PASS    AA=G;DP=121     GT:GQ:DP        1|1:55:30       0|0:75:26       1|0:100:66
+5      46265845        rs8188250       A       G       .       PASS    AA=.;DP=95      GT:GQ:DP        1|1:55:30       1|0:100:17      1|1:80:48
+2      6914778 rs1448879       T       C       .       PASS    AA=C;DP=119     GT:GQ:DP        1|1:55:30       1|0:100:22      1|1:100:68
+13     35854641        rs7998545       A       G       .       PASS    AA=G;DP=110     GT:GQ:DP        1|1:55:30       1|0:100:25      1|1:100:50
+3      115445740       rs7623090       G       C       .       PASS    AA=G;DP=138     GT:GQ:DP        1|1:55:30       1|0:100:30      1|1:100:79
+1      964357  rs2465133       G       T       .       PASS    AA=-;DP=138     GT:GQ:DP        1|1:55:30       1|0:47:12       1|1:100:96
+10     12198787        rs2658194       C       T       .       PASS    AA=t;DP=79      GT:GQ:DP        1|1:55:30       1|0:68:11       1|1:79:28
+5      52106956        rs1363961       G       A       .       PASS    AA=G;DP=95      GT:GQ:DP        1|1:55:30       1|0:77:23       1|1:55:30
+13     34023061        .       T       C       .       PASS    AA=T;DP=98      GT:GQ:DP        1|1:55:30       1|0:95:23       1|1:97:44
+2      57978773        rs986436        G       A       .       PASS    AA=A;DP=133     GT:GQ:DP        1|1:55:30       1|1:61:24       1|1:100:81
+3      23182096        rs9831806       T       G       .       PASS    AA=G;DP=125     GT:GQ:DP        1|1:55:31       0|1:100:15      1|0:100:77
+15     47594681        rs4396481       G       T       .       PASS    AA=T;DP=123     GT:GQ:DP        1|1:55:31       0|1:100:17      1|0:100:71
+4      132326677       rs477169        G       C       .       PASS    AA=C;DP=129     GT:GQ:DP        1|1:55:31       0|1:100:19      1|0:100:37
+2      223806424       rs4674766       G       C       .       PASS    AA=C;DP=126     GT:GQ:DP        1|1:55:31       0|1:100:27      1|0:100:67
+11     45515168        rs4756003       T       C       .       PASS    AA=t;DP=116     GT:GQ:DP        1|1:55:31       0|1:10:14       1|0:100:70
+1      228525315       rs16851510      C       A       .       PASS    AA=C;DP=122;HM2;HM3     GT:GQ:DP        1|1:55:32       0|1:100:20      1|0:100:71
+8      135198190       rs1074935       A       G       .       PASS    AA=G;DP=141     GT:GQ:DP        1|1:55:32       0|1:100:27      1|0:100:79
+4      145693923       rs1489759       A       G       .       PASS    AA=G;DP=109     GT:GQ:DP        1|1:55:32       1|1:63:27       1|1:100:50
+17     28360371        rs28943 A       G       .       PASS    AA=A;DP=143     GT:GQ:DP        1|1:55:36       0|0:65:24       1|0:100:39
+2      180743411       rs6746214       C       T       .       PASS    AA=C;DP=149     GT:GQ:DP        1|1:55:36       0|0:96:34       1|0:100:80
+X      93587518        rs2782669       T       C       .       PASS    AA=.;DP=114     GT:GQ:DP        1|1:56:17       1|1:100:32      1|1:100:32
+12     107181285       rs2888967       A       G       .       PASS    AA=G;DP=116     GT:GQ:DP        1|1:56:17       1|1:100:35      1|1:100:64
+1      183768382       rs4651267       T       G       .       PASS    AA=T;DP=76      GT:GQ:DP        1|1:56:17       1|1:18:15       1|1:77:44
+11     18603909        rs10766488      A       C       .       PASS    AA=C;DP=86      GT:GQ:DP        1|1:56:17       1|1:21:16       1|1:100:42
+4      133390433       rs11099182      T       G       .       PASS    AA=G;DP=104     GT:GQ:DP        1|1:56:17       1|1:22:17       1|1:100:70
+3      128281183       rs6439033       C       T       .       PASS    AA=.;DP=113     GT:GQ:DP        1|1:56:17       1|1:25:17       1|1:100:77
+7      157848466       rs4909072       A       G       .       PASS    AA=N;DP=76      GT:GQ:DP        1|1:56:17       1|1:26:7        1|1:100:43
+7      156006973       rs1534336       C       G       .       PASS    AA=G;DP=61      GT:GQ:DP        1|1:56:17       1|1:29:9        1|1:100:27
+8      94250715        rs278594        A       T       .       PASS    AA=A;DP=113     GT:GQ:DP        1|1:56:17       1|1:31:23       1|1:100:72
+16     4372030 rs3810818       A       C       .       PASS    AA=A;DP=59      GT:GQ:DP        1|1:56:17       1|1:32:10       1|1:100:28
+14     46315901        rs4476092       C       T       .       PASS    AA=T;DP=78      GT:GQ:DP        1|1:56:17       1|1:32:15       1|1:100:46
+9      73153086        rs6560197       C       T       .       PASS    AA=T;DP=89      GT:GQ:DP        1|1:56:17       1|1:36:18       1|1:100:54
+4      66773057        rs10222777      T       A       .       PASS    AA=A;DP=60      GT:GQ:DP        1|1:56:17       1|1:38:11       1|1:100:31
+16     6964938 rs7500821       C       G       .       PASS    AA=G;DP=72      GT:GQ:DP        1|1:56:17       1|1:38:11       1|1:100:34
+7      63441566        rs641215        C       G       .       PASS    AA=G;DP=69      GT:GQ:DP        1|1:56:17       1|1:38:13       1|1:100:32
+6      1646826 rs4959147       G       A       .       PASS    AA=A;DP=79      GT:GQ:DP        1|1:56:17       1|1:38:17       1|1:100:44
+16     61628821        rs2036800       C       T       .       PASS    AA=C;DP=94      GT:GQ:DP        1|1:56:17       1|1:38:22       1|1:100:54
+2      105826086       rs934306        C       A       .       PASS    AA=C;DP=68      GT:GQ:DP        1|1:56:17       1|1:41:12       1|1:100:31
+12     36463761        rs1315368       G       A       .       PASS    AA=.;DP=101     GT:GQ:DP        1|1:56:17       1|1:41:27       1|1:100:44
+15     97877310        rs57876761      G       A       .       PASS    AA=G;DP=94      GT:GQ:DP        1|1:56:17       1|1:42:16       1|1:100:61
+7      124808270       rs7780578       G       T       .       PASS    AA=T;DP=94      GT:GQ:DP        1|1:56:17       1|1:43:20       1|1:100:54
+12     28224375        rs2078017       C       T       .       PASS    AA=T;DP=86      GT:GQ:DP        1|1:56:17       1|1:43:24       1|1:100:19
+4      65902237        rs1451179       T       A       .       PASS    AA=T;DP=78      GT:GQ:DP        1|1:56:17       1|1:44:13       1|1:100:36
+8      32052572        rs12543109      C       G       .       PASS    AA=C;DP=82      GT:GQ:DP        1|1:56:17       1|1:44:13       1|1:100:51
+4      116297824       rs1940329       C       A       .       PASS    AA=A;DP=87      GT:GQ:DP        1|1:56:17       1|1:44:13       1|1:100:57
+10     59518866        rs1759343       T       C       .       PASS    AA=T;DP=63      GT:GQ:DP        1|1:56:17       1|1:44:14       1|1:100:30
+9      29973433        rs34585690      T       C       .       PASS    AA=C;DP=82      GT:GQ:DP        1|1:56:17       1|1:44:14       1|1:100:50
+2      169742241       rs7565788       T       C       .       PASS    AA=C;DP=70      GT:GQ:DP        1|1:56:17       1|1:44:14       1|1:82:28
+6      18310543        rs183341        A       G       .       PASS    AA=G;DP=77      GT:GQ:DP        1|1:56:17       1|1:44:15       1|1:100:46
+5      58175673        rs1423362       G       A       .       PASS    AA=G;DP=86      GT:GQ:DP        1|1:56:17       1|1:46:19       1|1:100:41
+7      78221352        rs1207877       T       A       .       PASS    AA=A;DP=79      GT:GQ:DP        1|1:56:17       1|1:47:14       1|1:100:48
+12     40906845        rs7956016       C       T       .       PASS    AA=T;DP=91      GT:GQ:DP        1|1:56:17       1|1:47:14       1|1:100:60
+2      9362129 rs4668616       C       T       .       PASS    AA=N;DP=76      GT:GQ:DP        1|1:56:17       1|1:47:15       1|1:100:44
+2      48443774        rs4328683       T       C       .       PASS    AA=C;DP=83      GT:GQ:DP        1|1:56:17       1|1:48:19       1|1:100:48
+5      148872288       rs1947582       C       T       .       PASS    AA=T;DP=91      GT:GQ:DP        1|1:56:17       1|1:49:20       1|1:100:56
+8      116653044       rs1963677       G       A       .       PASS    AA=G;DP=62      GT:GQ:DP        1|1:56:17       1|1:50:15       1|1:100:23
+3      77662905        rs796529        A       C       .       PASS    AA=C;DP=86      GT:GQ:DP        1|1:56:17       1|1:50:15       1|1:100:53
+1      145685874       rs6593808       A       G       .       PASS    AA=G;DP=92      GT:GQ:DP        1|1:56:17       1|1:50:15       1|1:100:56
+X      7059978 rs61429406      G       A       .       PASS    AA=g;DP=91      GT:GQ:DP        1|1:56:17       1|1:50:16       1|1:100:42
+18     71808306        rs7243981       G       A       .       PASS    AA=A;DP=84      GT:GQ:DP        1|1:56:17       1|1:50:16       1|1:100:48
+8      58792240        rs10957013      G       T       .       PASS    AA=a;DP=119     GT:GQ:DP        1|1:56:17       1|1:50:21       1|1:100:81
+X      81190891        rs557329        G       T       .       PASS    AA=G;DP=128     GT:GQ:DP        1|1:56:17       1|1:51:25       1|1:100:38
+11     81718587        rs4483611       T       A       .       PASS    AA=A;DP=71      GT:GQ:DP        1|1:56:17       1|1:53:16       1|1:100:27
+X      16868936        rs5924619       T       C       .       PASS    AA=C;DP=89      GT:GQ:DP        1|1:56:17       1|1:53:16       1|1:100:29
+2      27954335        rs6547813       C       T       .       PASS    AA=T;DP=90      GT:GQ:DP        1|1:56:17       1|1:53:16       1|1:100:55
+5      71539263        rs10036291      C       G       .       PASS    AA=G;DP=77      GT:GQ:DP        1|1:56:17       1|1:53:17       1|1:100:43
+9      110331317       rs944674        G       A       .       PASS    AA=A;DP=92      GT:GQ:DP        1|1:56:17       1|1:53:17       1|1:100:58
+4      127096322       rs6851548       G       A       .       PASS    AA=A;DP=94      GT:GQ:DP        1|1:56:17       1|1:53:17       1|1:100:60
+4      97402359        rs1827888       T       A       .       PASS    AA=A;DP=110     GT:GQ:DP        1|1:56:17       1|1:53:17       1|1:100:73
+9      25320810        rs1327385       G       A       .       PASS    AA=A;DP=89      GT:GQ:DP        1|1:56:17       1|1:56:18       1|1:100:50
+X      65139510        rs3843788       A       G       .       PASS    AA=A;DP=105     GT:GQ:DP        1|1:56:17       1|1:56:19       1|1:100:42
+7      108270298       rs6466254       A       G       .       PASS    AA=G;DP=77      GT:GQ:DP        1|1:56:17       1|1:56:21       1|1:100:39
+6      141405502       .       G       A       .       PASS    AA=A;DP=82      GT:GQ:DP        1|1:56:17       1|1:59:18       1|1:100:47
+13     34928313        rs7329838       C       T       .       PASS    AA=T;DP=87      GT:GQ:DP        1|1:56:17       1|1:59:18       1|1:100:50
+2      148439347       rs34539489      T       C       .       PASS    AA=T;DP=92      GT:GQ:DP        1|1:56:17       1|1:59:18       1|1:100:55
+14     22358066        rs10136960      T       C       .       PASS    AA=C;DP=106     GT:GQ:DP        1|1:56:17       1|1:59:18       1|1:100:73
+13     108296029       rs440546        T       A       .       PASS    AA=A;DP=114     GT:GQ:DP        1|1:56:17       1|1:59:18       1|1:100:81
+3      23818477        rs7634023       C       T       .       PASS    AA=T;DP=105     GT:GQ:DP        1|1:56:17       1|1:59:19       1|1:100:68
+8      47087453        rs1880506       T       A       .       PASS    AA=.;DP=83      GT:GQ:DP        1|1:56:17       1|1:61:24       1|1:100:31
+X      141475196       rs7053968       A       T       .       PASS    AA=A;DP=100     GT:GQ:DP        1|1:56:17       1|1:62:19       1|1:100:31
+8      78083037        rs7843788       G       A       .       PASS    AA=A;DP=84      GT:GQ:DP        1|1:56:17       1|1:62:19       1|1:100:48
+7      2026476 rs4721313       T       C       .       PASS    AA=C;DP=88      GT:GQ:DP        1|1:56:17       1|1:62:19       1|1:100:51
+14     66836269        .       G       A       .       PASS    AA=A;DP=87      GT:GQ:DP        1|1:56:17       1|1:62:19       1|1:100:53
+6      65115540        rs593628        A       C       .       PASS    AA=C;DP=106     GT:GQ:DP        1|1:56:17       1|1:62:19       1|1:100:67
+14     85936364        rs12887865      C       T       .       PASS    AA=T;DP=76      GT:GQ:DP        1|1:56:17       1|1:62:20       1|1:100:39
+12     33761704        rs1825903       G       C       .       PASS    AA=G;DP=88      GT:GQ:DP        1|1:56:17       1|1:62:20       1|1:100:50
+2      209288343       rs7608369       C       T       .       PASS    AA=c;DP=89      GT:GQ:DP        1|1:56:17       1|1:62:20       1|1:100:51
+12     19781503        rs7953642       C       G       .       PASS    AA=C;DP=91      GT:GQ:DP        1|1:56:17       1|1:62:20       1|1:100:53
+12     5488193 rs7133664       G       A       .       PASS    AA=A;DP=88      GT:GQ:DP        1|1:56:17       1|1:65:20       1|1:100:50
+3      28293804        rs4680907       C       T       .       PASS    AA=T;DP=72      GT:GQ:DP        1|1:56:17       1|1:65:21       1|1:100:33
+7      43627676        rs6463199       C       G       .       PASS    AA=G;DP=86      GT:GQ:DP        1|1:56:17       1|1:65:21       1|1:100:40
+2      117389178       rs9808188       T       C       .       PASS    AA=T;DP=107     GT:GQ:DP        1|1:56:17       1|1:65:21       1|1:100:69
+2      154888364       rs4140691       C       T       .       PASS    AA=T;DP=86      GT:GQ:DP        1|1:56:17       1|1:65:22       1|1:100:48
+4      95168203        rs280067        C       T       .       PASS    AA=T;DP=90      GT:GQ:DP        1|1:56:17       1|1:65:22       1|1:100:52
+13     56543585        rs4329816       G       C       .       PASS    AA=C;DP=102     GT:GQ:DP        1|1:56:17       1|1:65:22       1|1:100:62
+5      103160007       rs583198        G       A       .       PASS    AA=A;DP=84      GT:GQ:DP        1|1:56:17       1|1:68:21       1|1:100:34
+11     10827341        rs903832        A       G       .       PASS    AA=a;DP=89      GT:GQ:DP        1|1:56:17       1|1:68:21       1|1:100:51
+18     68028222        rs7231546       C       G       .       PASS    AA=g;DP=113     GT:GQ:DP        1|1:56:17       1|1:68:21       1|1:100:78
+9      94091902        rs10739927      G       T       .       PASS    AA=T;DP=93      GT:GQ:DP        1|1:56:17       1|1:68:22       1|1:100:52
+5      77778009        rs4290994       C       T       .       PASS    AA=T;DP=68      GT:GQ:DP        1|1:56:17       1|1:71:22       1|1:100:20
+6      48791106        rs2495920       G       A       .       PASS    AA=A;DP=84      GT:GQ:DP        1|1:56:17       1|1:71:22       1|1:100:47
+6      55313206        rs883572        C       A       .       PASS    AA=N;DP=91      GT:GQ:DP        1|1:56:17       1|1:71:22       1|1:100:50
+7      77847101        rs1029819       C       T       .       PASS    AA=T;DP=81      GT:GQ:DP        1|1:56:17       1|1:74:23       1|1:100:40
+6      51031754        rs552731        A       C       .       PASS    AA=C;DP=120     GT:GQ:DP        1|1:56:17       1|1:74:23       1|1:100:77
+5      119190027       rs7734387       A       G       .       PASS    AA=G;DP=97      GT:GQ:DP        1|1:56:17       1|1:74:24       1|1:100:58
+4      190023412       rs6852003       C       G       .       PASS    AA=C;DP=85      GT:GQ:DP        1|1:56:17       1|1:74:26       1|1:100:37
+X      149075177       rs9723717       G       A       .       PASS    AA=G;DP=120     GT:GQ:DP        1|1:56:17       1|1:77:24       1|1:100:46
+8      78433927        rs1154839       T       C       .       PASS    AA=C;DP=105     GT:GQ:DP        1|1:56:17       1|1:77:24       1|1:100:63
+21     40487152        rs57055280      C       A       .       PASS    AA=A;DP=109     GT:GQ:DP        1|1:56:17       1|1:77:25       1|1:100:67
+13     23348964        rs7318157       G       C       .       PASS    AA=C;DP=83      GT:GQ:DP        1|1:56:17       1|1:77:26       1|1:100:40
+21     27792010        rs242371        T       A       .       PASS    AA=T;DP=73      GT:GQ:DP        1|1:56:17       1|1:80:25       1|1:100:23
+X      109627248       rs5942640       A       G       .       PASS    AA=N;DP=118     GT:GQ:DP        1|1:56:17       1|1:83:27       1|1:100:29
+X      135362839       rs1203582       C       T       .       PASS    AA=c;DP=89      GT:GQ:DP        1|1:56:17       1|1:83:28       1|1:100:25
+11     62264423        rs2958244       T       A       .       PASS    AA=A;DP=94      GT:GQ:DP        1|1:56:17       1|1:86:27       1|1:100:49
+X      22747829        rs2107305       G       T       .       PASS    AA=T;DP=107     GT:GQ:DP        1|1:56:17       1|1:89:28       1|1:100:31
+2      15939077        rs2114800       T       A       .       PASS    AA=A;DP=61      GT:GQ:DP        1|1:56:18       1|1:16:8        1|1:92:37
+17     42355546        rs183199        G       C       .       PASS    AA=C;DP=66      GT:GQ:DP        1|1:56:18       1|1:18:10       1|1:89:37
+8      99259388        rs2514348       A       G       .       PASS    AA=G;DP=78      GT:GQ:DP        1|1:56:18       1|1:19:13       1|1:100:47
+6      148240665       rs544142        T       C       .       PASS    AA=C;DP=103     GT:GQ:DP        1|1:56:18       1|1:24:24       1|1:100:62
+11     45612628        rs1348962       T       C       .       PASS    AA=T;DP=80      GT:GQ:DP        1|1:56:18       1|1:29:19       1|1:86:45
+10     129780101       rs7922147       A       G       .       PASS    AA=G;DP=88      GT:GQ:DP        1|1:56:18       1|1:35:10       1|1:100:59
+3      142608395       rs1344672       C       G       .       PASS    AA=G;DP=107     GT:GQ:DP        1|1:56:18       1|1:41:12       1|1:100:33
+13     24547868        rs2994864       T       C       .       PASS    AA=C;DP=103     GT:GQ:DP        1|1:56:18       1|1:44:13       1|1:100:71
+10     118631869       rs2429365       C       T       .       PASS    AA=T;DP=75      GT:GQ:DP        1|1:56:18       1|1:47:14       1|1:100:42
+X      143647027       rs5919894       T       C       .       PASS    AA=C;DP=82      GT:GQ:DP        1|1:56:18       1|1:50:15       1|1:100:33
+9      93610404        rs10992117      A       G       .       PASS    AA=G;DP=118     GT:GQ:DP        1|1:56:18       1|1:53:17       1|1:100:40
+21     46899964        rs7275592       A       G       .       PASS    AA=A;DP=87      GT:GQ:DP        1|1:56:18       1|1:53:17       1|1:100:53
+2      218270226       rs4672843       T       G       .       PASS    AA=G;DP=103     GT:GQ:DP        1|1:56:18       1|1:53:17       1|1:100:68
+13     30719992        rs4943266       T       C       .       PASS    AA=C;DP=83      GT:GQ:DP        1|1:56:18       1|1:55:20       1|1:100:45
+18     895537  rs2231183       T       C       .       PASS    AA=T;DP=87      GT:GQ:DP        1|1:56:18       1|1:56:17       1|1:100:41
+21     23980153        rs204408        T       A       .       PASS    AA=A;DP=67      GT:GQ:DP        1|1:56:18       1|1:56:17       1|1:97:32
+2      75314063        rs12328696      T       C       .       PASS    AA=C;DP=97      GT:GQ:DP        1|1:56:18       1|1:56:19       1|1:100:60
+2      106133648       rs10192305      G       A       .       PASS    AA=A;DP=111     GT:GQ:DP        1|1:56:18       1|1:56:19       1|1:100:75
+4      119167377       rs2389491       T       A       .       PASS    AA=A;DP=103     GT:GQ:DP        1|1:56:18       1|1:59:18       1|1:100:68
+5      10154988        rs1472795       T       A       .       PASS    AA=A;DP=96      GT:GQ:DP        1|1:56:18       1|1:59:19       1|1:100:59
+8      114393179       rs7813842       A       G       .       PASS    AA=G;DP=117     GT:GQ:DP        1|1:56:18       1|1:60:30       1|1:100:68
+8      28942894        rs6558088       T       C       .       PASS    AA=C;DP=99      GT:GQ:DP        1|1:56:18       1|1:61:26       1|1:100:29
+3      79958497        rs1354209       T       C       .       PASS    AA=t;DP=102     GT:GQ:DP        1|1:56:18       1|1:65:21       1|1:100:63
+4      43587139        rs7686398       T       C       .       PASS    AA=C;DP=70      GT:GQ:DP        1|1:56:18       1|1:65:22       1|1:100:21
+5      178358090       rs1532441       T       C       .       PASS    AA=t;DP=109     GT:GQ:DP        1|1:56:18       1|1:65:22       1|1:100:70
+5      3944796 rs550167        G       T       .       PASS    AA=T;DP=101     GT:GQ:DP        1|1:56:18       1|1:68:21       1|1:100:49
+3      74773407        rs1579904       C       T       .       PASS    AA=T;DP=97      GT:GQ:DP        1|1:56:18       1|1:68:21       1|1:100:59
+5      147300556       rs7720236       A       G       .       PASS    AA=a;DP=95      GT:GQ:DP        1|1:56:18       1|1:74:24       1|1:100:55
+8      51068110        rs318867        G       A       .       PASS    AA=A;DP=72      GT:GQ:DP        1|1:56:18       1|1:77:26       1|1:100:21
+X      64452207        .       C       T       .       PASS    AA=c;DP=111     GT:GQ:DP        1|1:56:18       1|1:92:29       1|1:100:34
+3      99283754        rs1388648       A       G       .       PASS    AA=A;DP=78      GT:GQ:DP        1|1:56:19       1|1:29:8        1|1:100:50
+10     127799186       rs1278398       T       C       .       PASS    AA=C;DP=85      GT:GQ:DP        1|1:56:19       1|1:41:12       1|1:100:52
+13     104332295       rs4772651       A       G       .       PASS    AA=G;DP=89      GT:GQ:DP        1|1:56:19       1|1:50:15       1|1:100:51
+21     17247394        rs7509631       G       A       .       PASS    AA=G;DP=54      GT:GQ:DP        1|1:56:19       1|1:56:17       1|1:89:12
+4      76280527        rs1391009       G       A       .       PASS    AA=A;DP=85      GT:GQ:DP        1|1:56:19       1|1:62:19       1|1:100:43
+2      159744649       rs4664270       C       G       .       PASS    AA=C;DP=124     GT:GQ:DP        1|1:56:19       1|1:62:22       1|1:100:86
+5      129295191       rs2436451       G       A       .       PASS    AA=A;DP=109     GT:GQ:DP        1|1:56:19       1|1:68:24       1|1:100:65
+10     101133645       rs2862606       T       C       .       PASS    AA=C;DP=122     GT:GQ:DP        1|1:56:19       1|1:73:33       1|1:100:69
+1      210430389       rs12746096      A       G       .       PASS    AA=G;DP=79;HM2  GT:GQ:DP        1|1:56:20       0|1:5:7 1|0:100:53
+2      118484066       rs4849655       G       C       .       PASS    AA=G;DP=86      GT:GQ:DP        1|1:56:21       1|1:35:13       1|1:57:53
+4      84831271        rs4144859       T       C       .       PASS    AA=C;DP=73      GT:GQ:DP        1|1:56:22       1|1:62:20       1|1:100:28
+7      84677016        rs2041411       G       T       .       PASS    AA=T;DP=82      GT:GQ:DP        1|1:56:23       1|1:32:19       1|1:100:27
+4      168704237       rs7660862       C       A       .       PASS    AA=A;DP=89      GT:GQ:DP        1|1:56:23       1|1:50:15       1|1:100:52
+14     42124458        rs9788498       T       C       .       PASS    AA=C;DP=106     GT:GQ:DP        1|1:56:23       1|1:56:23       1|1:100:62
+9      92168356        rs1630044       A       G       .       PASS    AA=G;DP=85      GT:GQ:DP        1|1:56:23       1|1:71:22       1|1:100:27
+10     11532724        rs2499918       G       T       .       PASS    AA=-;DP=93      GT:GQ:DP        1|1:56:23       1|1:8:8 1|1:100:61
+2      241190292       rs3997219       T       C       .       PASS    AA=t;DP=99      GT:GQ:DP        1|1:56:24       1|1:40:17       1|1:100:59
+11     99548493        rs1421554       G       A       .       PASS    AA=A;DP=108     GT:GQ:DP        1|1:56:24       1|1:71:25       1|1:100:57
+12     77108608        rs1448752       A       T       .       PASS    AA=A;DP=115     GT:GQ:DP        1|1:56:25       0|1:100:31      1|0:100:56
+1      217029367       rs7418453       T       G       .       PASS    AA=G;DP=111;HM2 GT:GQ:DP        1|1:56:25       0|1:82:20       1|0:100:67
+3      181526662       rs16831443      A       G       .       PASS    AA=.;DP=103     GT:GQ:DP        1|1:56:25       1|0:100:17      1|1:100:60
+15     85147853        rs4887244       G       A       .       PASS    AA=g;DP=107     GT:GQ:DP        1|1:56:25       1|0:69:16       1|1:100:67
+16     6471395 rs887494        G       A       .       PASS    AA=A;DP=108     GT:GQ:DP        1|1:56:25       1|0:76:15       1|1:100:72
+10     84867813        rs10885804      C       A       .       PASS    AA=C;DP=117     GT:GQ:DP        1|1:56:26       0|0:59:26       1|0:100:63
+8      134078130       rs4142712       G       A       .       PASS    AA=G;DP=113     GT:GQ:DP        1|1:56:26       0|1:100:21      1|0:100:64
+10     29298274        rs813716        A       G       .       PASS    AA=G;DP=128     GT:GQ:DP        1|1:56:26       0|1:71:24       1|0:100:77
+16     12655991        rs1713483       C       A       .       PASS    AA=A;DP=102     GT:GQ:DP        1|1:56:26       1|1:83:27       1|1:100:50
+21     14548585        rs17001643      C       T       .       PASS    AA=C;DP=106     GT:GQ:DP        1|1:56:27       0|0:66:23       1|0:100:55
+11     119455137       rs648067        A       C       .       PASS    AA=C;DP=147     GT:GQ:DP        1|1:56:28       1|1:100:33      1|1:100:86
+1      4845341 rs6658585       A       C       .       PASS    AA=C;DP=124;HM2;HM3     GT:GQ:DP        1|1:56:28       1|1:22:24       1|1:100:72
+9      73476775        rs971355        A       C       .       PASS    AA=C;DP=115     GT:GQ:DP        1|1:56:28       1|1:40:18       1|1:100:68
+6      117321559       rs339339        A       C       .       PASS    AA=C;DP=115     GT:GQ:DP        1|1:56:28       1|1:41:23       1|1:100:51
+4      165741374       rs6536828       C       A       .       PASS    AA=A;DP=116     GT:GQ:DP        1|1:56:28       1|1:59:18       1|1:100:71
+10     56143850        rs10740592      C       T       .       PASS    AA=T;DP=118     GT:GQ:DP        1|1:56:28       1|1:80:25       1|1:100:60
+18     32898338        rs9961412       A       G       .       PASS    AA=G;DP=141     GT:GQ:DP        1|1:56:28       1|1:98:31       1|1:100:82
+7      103701561       rs10215456      T       C       .       PASS    AA=C;DP=101     GT:GQ:DP        1|1:56:29       1|1:29:19       1|1:100:54
+2      231501667       rs3111778       G       T       .       PASS    AA=T;DP=117     GT:GQ:DP        1|1:56:31       0|1:54:22       1|0:100:65
+2      176111032       rs1533885       A       G       .       PASS    AA=A;DP=159     GT:GQ:DP        1|1:56:32       0|0:100:40      1|0:100:47
+1      9281484 rs2310923       T       C       .       PASS    AA=T;DP=132     GT:GQ:DP        1|1:56:32       0|0:48:17       1|0:100:84
+15     87516238        rs11852294      C       T       .       PASS    AA=C;DP=118     GT:GQ:DP        1|1:56:32       0|0:66:23       1|0:100:58
+9      113775191       rs57079713      A       C       .       PASS    AA=A;DP=123     GT:GQ:DP        1|1:56:32       0|0:72:24       1|0:100:68
+18     23272605        rs1401461       G       T       .       PASS    AA=G;DP=118     GT:GQ:DP        1|1:56:32       0|0:78:26       1|0:100:58
+19     3452303 .       A       C       .       PASS    AA=A;DP=144     GT:GQ:DP        1|1:56:32       0|0:90:30       1|0:100:82
+4      53569257        rs7689426       C       T       .       PASS    AA=T;DP=138     GT:GQ:DP        1|1:56:34       1|1:40:25       1|1:100:76
+9      118626753       rs7860939       C       A       .       PASS    AA=C;DP=119     GT:GQ:DP        1|1:56:35       0|1:79:19       1|0:100:60
+20     35342753        rs6073965       T       C       .       PASS    AA=T;DP=133     GT:GQ:DP        1|1:56:37       1|1:31:25       1|1:100:72
+11     96015098        rs7933001       A       T       .       PASS    AA=A;DP=136     GT:GQ:DP        1|1:56:40       0|1:100:25      1|0:100:71
+1      153091541       rs60296471      T       C       .       PASS    AA=T;DP=103     GT:GQ:DP        1|1:56:42       0|0:22:13       1|0:100:38
+12     33644075        rs1873011       T       C       .       PASS    AA=C;DP=67      GT:GQ:DP        1|1:57:19       1|0:100:10      1|1:100:38
+11     23406264        rs11027209      T       G       .       PASS    AA=G;DP=85      GT:GQ:DP        1|1:57:19       1|0:100:11      1|1:100:57
+14     93410086        rs8013393       T       C       .       PASS    AA=C;DP=96      GT:GQ:DP        1|1:57:19       1|0:100:12      1|1:100:51
+1      63730547        rs6670613       G       T       .       PASS    AA=G;DP=75      GT:GQ:DP        1|1:57:19       1|0:100:13      1|1:89:43
+3      86774136        rs9818679       C       T       .       PASS    AA=T;DP=84      GT:GQ:DP        1|1:57:19       1|0:100:14      1|1:100:51
+8      111503000       rs4546628       C       T       .       PASS    AA=C;DP=65      GT:GQ:DP        1|1:57:19       1|0:100:14      1|1:57:19
+3      104921564       rs4493441       G       A       .       PASS    AA=A;DP=83      GT:GQ:DP        1|1:57:19       1|0:100:15      1|1:100:49
+4      33833425        rs13107951      T       C       .       PASS    AA=T;DP=88      GT:GQ:DP        1|1:57:19       1|0:100:16      1|1:100:52
+4      16161972        rs11733572      G       A       .       PASS    AA=N;DP=66      GT:GQ:DP        1|1:57:19       1|0:100:16      1|1:63:21
+21     23705552        rs1354480       A       T       .       PASS    AA=T;DP=99      GT:GQ:DP        1|1:57:19       1|0:100:17      1|1:100:54
+3      123954521       rs4048549       G       A       .       PASS    AA=g;DP=89      GT:GQ:DP        1|1:57:19       1|0:100:19      1|1:100:38
+3      170678970       rs9290367       T       C       .       PASS    AA=C;DP=95      GT:GQ:DP        1|1:57:19       1|0:100:19      1|1:100:45
+7      128455486       rs4731540       C       T       .       PASS    AA=T;DP=99      GT:GQ:DP        1|1:57:19       1|0:100:19      1|1:100:59
+3      140281661       rs689394        A       C       .       PASS    AA=C;DP=82      GT:GQ:DP        1|1:57:19       1|0:100:20      1|1:100:35
+4      143044279       rs57134516      G       A       .       PASS    AA=G;DP=86      GT:GQ:DP        1|1:57:19       1|0:100:20      1|1:100:37
+5      131017325       rs10054733      C       T       .       PASS    AA=T;DP=93      GT:GQ:DP        1|1:57:19       1|0:100:21      1|1:100:42
+1      60744952        rs60486691      A       C       .       PASS    AA=A;DP=107     GT:GQ:DP        1|1:57:19       1|0:100:21      1|1:100:65
+2      5926908 rs2709446       A       G       .       PASS    AA=G;DP=109     GT:GQ:DP        1|1:57:19       1|0:100:21      1|1:100:67
+13     56470383        rs4130943       C       T       .       PASS    AA=C;DP=92      GT:GQ:DP        1|1:57:19       1|0:100:22      1|1:100:51
+7      77943733        rs10241266      T       C       .       PASS    AA=T;DP=123     GT:GQ:DP        1|1:57:19       1|0:100:23      1|1:100:83
+15     45627077        rs8027136       G       T       .       PASS    AA=G;DP=88      GT:GQ:DP        1|1:57:19       1|0:100:23      1|1:99:47
+3      39166033        rs1274963       A       G       .       PASS    AA=G;DP=95      GT:GQ:DP        1|1:57:19       1|0:100:24      1|1:100:49
+18     40348406        rs4405635       C       T       .       PASS    AA=T;DP=89      GT:GQ:DP        1|1:57:19       1|0:100:24      1|1:89:45
+18     61783780        rs2541871       C       T       .       PASS    AA=T;DP=111     GT:GQ:DP        1|1:57:19       1|0:100:25      1|1:100:53
+X      50864572        rs5915242       T       C       .       PASS    AA=t;DP=129     GT:GQ:DP        1|1:57:19       1|0:100:27      1|1:100:42
+18     53613963        rs6566901       G       A       .       PASS    AA=G;DP=117     GT:GQ:DP        1|1:57:19       1|0:100:27      1|1:100:71
+4      65309706        rs6822040       A       G       .       PASS    AA=G;DP=99      GT:GQ:DP        1|1:57:19       1|0:100:28      1|1:98:52
+10     85810790        rs4933957       C       T       .       PASS    AA=T;DP=88      GT:GQ:DP        1|1:57:19       1|0:100:32      1|1:99:33
+4      179910897       rs346131        C       T       .       PASS    AA=T;DP=66      GT:GQ:DP        1|1:57:19       1|0:21:17       1|1:57:19
+7      146120778       rs1541512       A       G       .       PASS    AA=G;DP=87      GT:GQ:DP        1|1:57:19       1|0:22:19       1|1:100:50
+4      114864820       rs17046453      G       A       .       PASS    AA=G;DP=70      GT:GQ:DP        1|1:57:19       1|0:48:13       1|1:87:29
+10     14611369        rs7918464       C       T       .       PASS    AA=T;DP=102     GT:GQ:DP        1|1:57:19       1|0:48:21       1|1:100:61
+14     106128198       rs8019016       C       A       .       PASS    AA=c;DP=77      GT:GQ:DP        1|1:57:19       1|0:49:11       1|1:99:33
+10     58603797        rs2036510       G       A       .       PASS    AA=A;DP=104     GT:GQ:DP        1|1:57:19       1|0:60:20       1|1:100:59
+11     4126613 rs4570574       A       C       .       PASS    AA=C;DP=121     GT:GQ:DP        1|1:57:19       1|0:61:18       1|1:100:38
+20     52257346        rs6097840       G       A       .       PASS    AA=A;DP=96      GT:GQ:DP        1|1:57:19       1|0:62:19       1|1:100:56
+4      126693398       rs9307567       C       T       .       PASS    AA=T;DP=87      GT:GQ:DP        1|1:57:19       1|0:71:18       1|1:100:47
+6      33672842        rs57831685      G       C       .       PASS    AA=C;DP=80      GT:GQ:DP        1|1:57:19       1|0:75:17       1|1:100:37
+19     39649205        rs6510419       C       T       .       PASS    AA=T;DP=89      GT:GQ:DP        1|1:57:19       1|0:87:16       1|1:100:42
+3      78650605        rs13079826      G       A       .       PASS    AA=A;DP=110     GT:GQ:DP        1|1:57:19       1|0:88:26       1|1:100:66
+9      134387909       rs944805        C       T       .       PASS    AA=C;DP=103     GT:GQ:DP        1|1:57:19       1|0:90:19       1|1:100:68
+8      104847077       rs3110459       T       A       .       PASS    AA=A;DP=81      GT:GQ:DP        1|1:57:19       1|0:92:12       1|1:100:41
+11     83026015        rs11233704      G       C       .       PASS    AA=G;DP=75      GT:GQ:DP        1|1:57:19       1|0:95:13       1|1:87:30
+14     88228765        rs2401747       A       T       .       PASS    AA=T;DP=100     GT:GQ:DP        1|1:57:20       0|1:100:17      1|0:100:62
+3      43815136        rs4682906       A       G       .       PASS    AA=G;DP=89      GT:GQ:DP        1|1:57:20       0|1:100:20      1|0:100:46
+5      104056808       rs576547        G       A       .       PASS    AA=A;DP=87      GT:GQ:DP        1|1:57:20       0|1:100:20      1|0:100:47
+9      104258155       rs10990108      T       A       .       PASS    AA=T;DP=94      GT:GQ:DP        1|1:57:20       0|1:100:20      1|0:100:53
+3      109542526       rs9871789       G       A       .       PASS    AA=G;DP=80      GT:GQ:DP        1|1:57:20       0|1:100:21      1|0:100:27
+12     54074777        rs10876762      T       A       .       PASS    AA=.;DP=96      GT:GQ:DP        1|1:57:20       0|1:100:21      1|0:100:42
+2      59687126        rs2674054       A       G       .       PASS    AA=G;DP=94      GT:GQ:DP        1|1:57:20       0|1:100:24      1|0:100:51
+13     25579353        rs1408621       G       A       .       PASS    AA=A;DP=117     GT:GQ:DP        1|1:57:20       0|1:100:24      1|0:100:73
+10     67870512        rs2135701       G       T       .       PASS    AA=T;DP=99      GT:GQ:DP        1|1:57:20       0|1:100:26      1|0:100:52
+1      64070133        rs687937        G       C       .       PASS    AA=C;DP=138     GT:GQ:DP        1|1:57:20       0|1:100:26      1|0:100:93
+18     38964051        rs7244875       G       C       .       PASS    AA=C;DP=130     GT:GQ:DP        1|1:57:20       0|1:100:28      1|0:100:86
+16     53020608        rs4783841       C       T       .       PASS    AA=T;DP=123     GT:GQ:DP        1|1:57:20       0|1:100:29      1|0:100:76
+3      112550858       rs2895381       G       A       .       PASS    AA=A;DP=76      GT:GQ:DP        1|1:57:20       0|1:25:11       1|0:100:43
+3      1488922 rs5023902       T       G       .       PASS    AA=T;DP=75      GT:GQ:DP        1|1:57:20       0|1:35:15       1|0:100:41
+10     56016709        rs4007216       G       C       .       PASS    AA=c;DP=84      GT:GQ:DP        1|1:57:20       0|1:44:12       1|0:100:52
+11     55265266        rs34115946      T       C       .       PASS    AA=T;DP=110     GT:GQ:DP        1|1:57:20       0|1:50:13       1|0:100:79
+14     37886004        rs1305548       G       A       .       PASS    AA=A;DP=64      GT:GQ:DP        1|1:57:20       0|1:54:9        1|0:100:24
+8      88605760        rs370290        T       G       .       PASS    AA=G;DP=89      GT:GQ:DP        1|1:57:20       0|1:55:21       1|0:100:49
+3      169119151       rs4955781       A       G       .       PASS    AA=G;DP=93      GT:GQ:DP        1|1:57:20       0|1:61:14       1|0:100:58
+5      86380859        rs2974017       G       C       .       PASS    AA=C;DP=96      GT:GQ:DP        1|1:57:20       0|1:62:20       1|0:100:32
+21     25614345        rs7283876       A       G       .       PASS    AA=G;DP=94      GT:GQ:DP        1|1:57:20       0|1:64:18       1|0:100:48
+11     39351455        rs6485090       C       T       .       PASS    AA=C;DP=103     GT:GQ:DP        1|1:57:20       0|1:65:20       1|0:100:67
+5      113140414       rs2128314       A       C       .       PASS    AA=A;DP=85      GT:GQ:DP        1|1:57:20       0|1:68:17       1|0:100:48
+7      135487758       rs10215312      A       G       .       PASS    AA=G;DP=100     GT:GQ:DP        1|1:57:20       0|1:68:17       1|0:100:64
+19     497169  rs5027243       T       A       .       PASS    AA=t;DP=98      GT:GQ:DP        1|1:57:20       0|1:78:18       1|0:100:59
+2      210334986       rs10932306      C       A       .       PASS    AA=C;DP=100     GT:GQ:DP        1|1:57:20       0|1:83:25       1|0:100:54
+9      13465962        rs1591235       G       A       .       PASS    AA=A;DP=110     GT:GQ:DP        1|1:57:20       0|1:83:33       1|0:100:56
+4      5355163 rs10017068      A       T       .       PASS    AA=T;DP=79      GT:GQ:DP        1|1:57:20       0|1:84:16       1|0:100:42
+2      35741336        rs6730766       G       C       .       PASS    AA=C;DP=116     GT:GQ:DP        1|1:57:20       0|1:87:23       1|0:100:64
+1      82752139        rs1555941       T       C       .       PASS    AA=C;DP=97;HM2  GT:GQ:DP        1|1:57:20       0|1:90:23       1|0:100:55
+11     71946995        rs395447        T       G       .       PASS    AA=G;DP=118     GT:GQ:DP        1|1:57:20       0|1:94:20       1|0:100:65
+12     123952029       rs6488953       T       C       .       PASS    AA=C;DP=87      GT:GQ:DP        1|1:57:20       1|0:100:13      1|1:100:53
+1      32877864        rs622244        C       T       .       PASS    AA=C;DP=85;HM2  GT:GQ:DP        1|1:57:20       1|0:100:17      1|1:80:49
+2      55400231        rs3791633       A       G       .       PASS    AA=G;DP=82      GT:GQ:DP        1|1:57:20       1|0:100:19      1|1:99:43
+4      157259844       rs4691303       A       G       .       PASS    AA=G;DP=102     GT:GQ:DP        1|1:57:20       1|0:100:20      1|1:100:61
+14     51219518        rs4243578       T       C       .       PASS    AA=T;DP=117     GT:GQ:DP        1|1:57:20       1|0:100:21      1|1:100:78
+3      102158583       rs1449299       T       A       .       PASS    AA=T;DP=111     GT:GQ:DP        1|1:57:20       1|0:100:25      1|1:100:64
+6      5000799 rs1122637       A       G       .       PASS    AA=A;DP=150     GT:GQ:DP        1|1:57:20       1|0:100:29      1|1:100:46
+8      76502767        .       A       G       .       PASS    AA=G;DP=95      GT:GQ:DP        1|1:57:20       1|0:100:29      1|1:99:33
+20     53572633        rs11905021      T       C       .       PASS    AA=C;DP=114     GT:GQ:DP        1|1:57:20       1|0:100:33      1|1:100:60
+7      157340104       rs892740        A       G       .       PASS    AA=G;DP=80      GT:GQ:DP        1|1:57:20       1|0:12:9        1|1:100:43
+X      49449114        rs17174031      C       T       .       PASS    AA=C;DP=133     GT:GQ:DP        1|1:57:20       1|0:48:30       1|1:100:60
+19     7386195 rs12983155      C       T       .       PASS    AA=C;DP=82      GT:GQ:DP        1|1:57:20       1|0:52:11       1|1:100:40
+14     103145465       rs61995761      T       C       .       PASS    AA=C;DP=92      GT:GQ:DP        1|1:57:20       1|0:58:13       1|1:100:59
+14     102993228       rs2273699       A       G       .       PASS    AA=A;DP=83      GT:GQ:DP        1|1:57:20       1|0:64:17       1|1:100:46
+3      177227067       rs4515055       A       G       .       PASS    AA=G;DP=85      GT:GQ:DP        1|1:57:20       1|0:79:15       1|1:100:50
+5      4069447 rs689043        G       A       .       PASS    AA=G;DP=94      GT:GQ:DP        1|1:57:20       1|0:97:17       1|1:100:58
+10     30920062        rs3123279       G       A       .       PASS    AA=A;DP=96      GT:GQ:DP        1|1:57:21       0|1:100:17      1|0:100:58
+2      65623535        rs6705904       T       G       .       PASS    AA=T;DP=93      GT:GQ:DP        1|1:57:21       0|1:100:21      1|0:100:47
+18     20743251        rs1376469       G       A       .       PASS    AA=G;DP=96      GT:GQ:DP        1|1:57:21       0|1:100:23      1|0:100:51
+5      82636334        rs301281        C       T       .       PASS    AA=T;DP=88      GT:GQ:DP        1|1:57:21       0|1:100:24      1|0:100:44
+12     124823071       rs2345776       A       C       .       PASS    AA=C;DP=111     GT:GQ:DP        1|1:57:21       0|1:100:27      1|0:100:47
+12     32843950        rs3850972       C       T       .       PASS    AA=T;DP=118     GT:GQ:DP        1|1:57:21       0|1:100:29      1|0:100:68
+4      143274892       rs4956317       G       A       .       PASS    AA=A;DP=101     GT:GQ:DP        1|1:57:21       0|1:32:13       1|0:100:70
+20     23706149        rs6132656       G       T       .       PASS    AA=g;DP=82      GT:GQ:DP        1|1:57:21       0|1:58:6        1|0:100:57
+6      162433641       rs6917337       G       A       .       PASS    AA=G;DP=124     GT:GQ:DP        1|1:57:21       0|1:61:27       1|0:100:76
+6      168276325       rs1565442       T       G       .       PASS    AA=T;DP=107     GT:GQ:DP        1|1:57:21       0|1:69:20       1|0:100:65
+9      121945428       rs5006524       A       G       .       PASS    AA=G;DP=93      GT:GQ:DP        1|1:57:21       0|1:75:13       1|0:100:59
+10     62088797        rs10994460      G       A       .       PASS    AA=G;DP=111     GT:GQ:DP        1|1:57:21       0|1:77:22       1|0:100:62
+20     12588774        rs1452319       G       A       .       PASS    AA=G;DP=111     GT:GQ:DP        1|1:57:21       0|1:89:16       1|0:100:78
+11     25829703        rs7119802       T       C       .       PASS    AA=C;DP=83      GT:GQ:DP        1|1:57:21       0|1:89:24       1|0:100:37
+9      117792608       rs4978658       A       G       .       PASS    AA=N;DP=89      GT:GQ:DP        1|1:57:21       0|1:9:16        1|0:100:50
+3      189370271       rs16863064      G       C       .       PASS    AA=C;DP=78      GT:GQ:DP        1|1:57:21       1|0:53:9        1|1:100:47
+7      80468850        rs853069        A       G       .       PASS    AA=G;DP=87      GT:GQ:DP        1|1:57:21       1|0:96:11       1|1:100:58
+9      82164236        rs10867513      T       C       .       PASS    AA=-;DP=65      GT:GQ:DP        1|1:57:22       0|1:9:9 1|0:100:29
+9      101952878       rs7028564       G       A       .       PASS    AA=G;DP=98      GT:GQ:DP        1|1:57:23       0|1:56:10       1|0:100:64
+22     46848174        rs6008540       T       C       .       PASS    AA=N;DP=88      GT:GQ:DP        1|1:57:23       1|1:62:20       1|1:100:32
+16     83765126        rs7190506       T       C       .       PASS    AA=T;DP=112     GT:GQ:DP        1|1:57:23       1|1:71:23       1|1:100:66
+12     16410287        rs2160512       A       G       .       PASS    AA=G;DP=87      GT:GQ:DP        1|1:57:24       0|1:89:14       1|0:100:47
+2      57089932        rs1594149       A       G       .       PASS    AA=N;DP=93      GT:GQ:DP        1|1:57:24       1|1:35:19       1|1:100:40
+16     84849378        rs1704484       C       T       .       PASS    AA=T;DP=114     GT:GQ:DP        1|1:57:24       1|1:58:24       1|1:100:65
+X      108990857       rs5942611       T       C       .       PASS    AA=C;DP=102     GT:GQ:DP        1|1:57:24       1|1:58:26       1|1:100:32
+4      179630937       rs2702455       G       C       .       PASS    AA=C;DP=102     GT:GQ:DP        1|1:57:24       1|1:62:19       1|1:100:57
+5      127954089       rs6883598       A       C       .       PASS    AA=C;DP=96      GT:GQ:DP        1|1:57:24       1|1:65:20       1|1:100:54
+6      100251309       rs505023        G       C       .       PASS    AA=G;DP=107     GT:GQ:DP        1|1:57:25       1|1:14:13       1|1:100:69
+18     44235663        rs1982818       C       T       .       PASS    AA=C;DP=96      GT:GQ:DP        1|1:57:25       1|1:18:16       1|1:100:56
+8      97158155        rs1118813       A       G       .       PASS    AA=G;DP=88      GT:GQ:DP        1|1:57:25       1|1:44:13       1|1:100:50
+4      154933566       rs1456389       A       T       .       PASS    AA=A;DP=96      GT:GQ:DP        1|1:57:25       1|1:50:15       1|1:100:43
+12     130081556       rs60533463      C       T       .       PASS    AA=C;DP=106     GT:GQ:DP        1|1:57:26       0|0:45:16       1|0:100:65
+6      38634285        rs13203189      C       G       .       PASS    AA=C;DP=123     GT:GQ:DP        1|1:57:26       1|0:72:25       1|1:100:71
+11     38714303        rs10768409      A       G       .       PASS    AA=-;DP=76      GT:GQ:DP        1|1:57:26       1|1:26:7        1|1:100:37
+11     98162344        rs232253        G       A       .       PASS    AA=G;DP=92      GT:GQ:DP        1|1:57:26       1|1:38:11       1|1:100:41
+12     36579839        rs4393389       G       A       .       PASS    AA=.;DP=111     GT:GQ:DP        1|1:57:26       1|1:46:25       1|1:100:61
+6      32177784        rs3096695       G       C       .       PASS    AA=A;DP=119     GT:GQ:DP        1|1:57:26       1|1:57:24       1|1:100:69
+5      154705362       rs260376        G       A       .       PASS    AA=A;DP=91      GT:GQ:DP        1|1:57:26       1|1:59:18       1|1:100:47
+6      74842670        rs6899867       A       G       .       PASS    AA=A;DP=109     GT:GQ:DP        1|1:57:26       1|1:59:18       1|1:100:65
+1      53137823        rs520281        G       C       .       PASS    AA=C;DP=122     GT:GQ:DP        1|1:57:26       1|1:68:22       1|1:100:74
+5      56951342        rs230833        G       A       .       PASS    AA=A;DP=115     GT:GQ:DP        1|1:57:26       1|1:77:25       1|1:100:64
+1      84508895        rs2811995       G       A       .       PASS    AA=A;DP=93      GT:GQ:DP        1|1:57:27       0|0:45:16       1|0:100:52
+1      246914451       rs4294448       C       T       .       PASS    AA=t;DP=133     GT:GQ:DP        1|1:57:27       0|1:100:26      1|0:100:78
+6      74580669        rs3005486       C       T       .       PASS    AA=T;DP=107     GT:GQ:DP        1|1:57:27       0|1:100:29      1|0:100:52
+6      42072948        rs9381114       A       G       .       PASS    AA=G;DP=114     GT:GQ:DP        1|1:57:27       1|1:77:24       1|1:100:62
+4      108952512       rs59908716      T       A       .       PASS    AA=t;DP=120     GT:GQ:DP        1|1:57:28       0|0:57:19       1|0:100:74
+2      18758867        rs7570789       G       C       .       PASS    AA=C;DP=102     GT:GQ:DP        1|1:57:28       0|1:77:21       1|0:100:53
+7      10801656        rs10085530      A       G       .       PASS    AA=G;DP=93      GT:GQ:DP        1|1:57:28       1|1:33:24       1|1:100:28
+13     20509791        rs9509495       C       T       .       PASS    AA=T;DP=112     GT:GQ:DP        1|1:57:28       1|1:50:17       1|1:100:69
+20     54235715        rs6069660       C       A       .       PASS    AA=A;DP=118     GT:GQ:DP        1|1:57:28       1|1:71:22       1|1:100:67
+10     69084274        rs1862687       A       C       .       PASS    AA=A;DP=90      GT:GQ:DP        1|1:57:29       0|0:45:15       1|0:100:34
+7      17661049        .       T       C       .       PASS    AA=T;DP=106     GT:GQ:DP        1|1:57:29       0|0:78:26       1|0:100:50
+5      66647612        rs2052856       A       C       .       PASS    AA=C;DP=117     GT:GQ:DP        1|1:57:30       1|1:50:29       1|1:100:58
+20     7341980 rs6054985       G       A       .       PASS    AA=G;DP=83      GT:GQ:DP        1|1:57:31       1|0:76:17       1|1:72:36
+2      238664015       rs9808016       A       C       .       PASS    AA=C;DP=105     GT:GQ:DP        1|1:57:31       1|1:4:19        1|1:90:43
+7      138825268       rs758261        T       A       .       PASS    AA=T;DP=119     GT:GQ:DP        1|1:57:33       0|1:58:17       1|0:100:72
+6      168133555       rs36168246      C       T       .       PASS    AA=t;DP=114     GT:GQ:DP        1|1:57:33       1|0:48:9        1|1:60:64
+2      224482986       rs630143        C       T       .       PASS    AA=c;DP=103     GT:GQ:DP        1|1:57:33       1|1:74:24       1|1:100:48
+12     104872947       .       G       T       .       PASS    AA=G;DP=126     GT:GQ:DP        1|1:57:35       0|0:60:20       1|0:100:54
+4      103020497       rs4463068       A       T       .       PASS    AA=A;DP=84      GT:GQ:DP        1|1:58:18       1|1:13:12       1|1:70:46
+3      127285943       rs17523366      T       C       .       PASS    AA=t;DP=61      GT:GQ:DP        1|1:58:18       1|1:14:8        1|1:50:23
+2      752741  rs7423929       T       C       .       PASS    AA=C;DP=85      GT:GQ:DP        1|1:58:21       0|0:33:12       1|0:100:52
+8      8927256 rs11780338      A       G       .       PASS    AA=A;DP=104     GT:GQ:DP        1|1:58:21       0|0:36:12       1|0:100:71
+10     108106847       rs34553437      G       A       .       PASS    AA=G;DP=71      GT:GQ:DP        1|1:58:21       0|0:36:13       1|0:100:39
+14     59683929        rs391306        G       C       .       PASS    AA=G;DP=82      GT:GQ:DP        1|1:58:21       0|0:36:13       1|0:100:48
+4      123336651       rs11941093      A       T       .       PASS    AA=A;DP=81      GT:GQ:DP        1|1:58:21       0|0:39:14       1|0:100:45
+3      89828611        rs55747951      C       T       .       PASS    AA=T;DP=102     GT:GQ:DP        1|1:58:21       0|0:42:14       1|0:100:28
+1      97765517        rs2786769       A       G       .       PASS    AA=a;DP=79      GT:GQ:DP        1|1:58:21       0|0:42:14       1|0:100:33
+11     114684281       rs2157612       C       A       .       PASS    AA=A;DP=73      GT:GQ:DP        1|1:58:21       0|0:42:14       1|0:100:39
+5      4397016 rs261158        G       T       .       PASS    AA=G;DP=97      GT:GQ:DP        1|1:58:21       0|0:42:14       1|0:100:61
+7      79346312        rs2525826       G       T       .       PASS    AA=T;DP=113     GT:GQ:DP        1|1:58:21       0|0:45:30       1|0:100:62
+14     38061679        rs8003056       T       C       .       PASS    AA=C;DP=109     GT:GQ:DP        1|1:58:21       0|0:47:20       1|0:100:67
+3      88779859        rs7610234       A       T       .       PASS    AA=T;DP=87      GT:GQ:DP        1|1:58:21       0|0:48:16       1|0:100:48
+14     60106916        rs9743622       T       A       .       PASS    AA=A;DP=107     GT:GQ:DP        1|1:58:21       0|0:48:16       1|0:100:69
+5      27627897        rs10057484      A       G       .       PASS    AA=A;DP=107     GT:GQ:DP        1|1:58:21       0|0:48:16       1|0:100:70
+9      86568731        rs10746748      A       G       .       PASS    AA=A;DP=91      GT:GQ:DP        1|1:58:21       0|0:51:18       1|0:100:50
+13     90193917        .       C       T       .       PASS    AA=C;DP=96      GT:GQ:DP        1|1:58:21       0|0:51:18       1|0:100:57
+18     8064027 rs506248        G       A       .       PASS    AA=A;DP=103     GT:GQ:DP        1|1:58:21       0|0:54:18       1|0:100:64
+21     27401065        rs1236217       C       T       .       PASS    AA=C;DP=113     GT:GQ:DP        1|1:58:21       0|0:57:35       1|0:100:56
+1      187373845       rs2861431       G       T       .       PASS    AA=T;DP=109;HM2;HM3     GT:GQ:DP        1|1:58:21       0|0:58:30       1|0:100:60
+10     113219960       rs2419585       C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        1|1:58:21       0|0:60:20       1|0:100:79
+10     130701640       rs7086836       C       T       .       PASS    AA=A;DP=114     GT:GQ:DP        1|1:58:21       0|0:60:21       1|0:100:70
+1      187541085       rs61832652      A       C       .       PASS    AA=A;DP=88      GT:GQ:DP        1|1:58:21       0|0:63:21       1|0:100:50
+13     45731151        rs1926005       A       C       .       PASS    AA=A;DP=103     GT:GQ:DP        1|1:58:21       0|0:63:21       1|0:100:63
+5      17828120        rs13174237      T       C       .       PASS    AA=C;DP=114     GT:GQ:DP        1|1:58:21       0|0:63:21       1|0:100:72
+4      165510172       rs4691117       C       T       .       PASS    AA=C;DP=113     GT:GQ:DP        1|1:58:21       0|0:63:21       1|0:100:73
+6      94412841        rs6454971       A       T       .       PASS    AA=T;DP=89      GT:GQ:DP        1|1:58:21       0|0:63:22       1|0:100:33
+X      41932273        rs7060692       A       G       .       PASS    AA=G;DP=123     GT:GQ:DP        1|1:58:21       0|0:63:22       1|0:100:45
+8      105241158       rs2028947       G       A       .       PASS    AA=G;DP=113     GT:GQ:DP        1|1:58:21       0|0:63:22       1|0:100:70
+5      101031711       rs1481771       T       C       .       PASS    AA=T;DP=108     GT:GQ:DP        1|1:58:21       0|0:66:22       1|0:100:67
+10     25935884        .       G       A       .       PASS    AA=G;DP=116     GT:GQ:DP        1|1:58:21       0|0:66:23       1|0:100:73
+13     103666280       rs9805316       T       C       .       PASS    AA=C;DP=90      GT:GQ:DP        1|1:58:21       0|0:69:23       1|0:100:46
+8      103892781       rs11992533      T       C       .       PASS    AA=T;DP=106     GT:GQ:DP        1|1:58:21       0|0:69:23       1|0:100:63
+9      6750217 rs12346963      C       T       .       PASS    AA=C;DP=141     GT:GQ:DP        1|1:58:21       0|0:71:27       1|0:100:48
+X      121010692       rs5911268       A       G       .       PASS    AA=G;DP=91      GT:GQ:DP        1|1:58:21       0|0:72:25       1|0:100:29
+7      16121860        rs6461223       C       T       .       PASS    AA=T;DP=108     GT:GQ:DP        1|1:58:21       0|0:72:25       1|0:100:65
+3      191358812       rs2969254       G       A       .       PASS    AA=g;DP=92      GT:GQ:DP        1|1:58:21       0|0:75:25       1|0:100:47
+13     39762252        .       A       G       .       PASS    AA=G;DP=137     GT:GQ:DP        1|1:58:21       0|0:82:34       1|0:100:84
+X      139489411       rs6634172       A       G       .       PASS    AA=A;DP=108     GT:GQ:DP        1|1:58:21       0|0:90:30       1|0:100:30
+12     26295019        .       A       G       .       PASS    AA=A;DP=124     GT:GQ:DP        1|1:58:21       0|0:90:30       1|0:100:70
+7      117356015       rs57689900      G       A       .       PASS    AA=G;DP=129     GT:GQ:DP        1|1:58:21       0|0:90:31       1|0:100:61
+12     67653513        rs7959626       C       T       .       PASS    AA=T;DP=104     GT:GQ:DP        1|1:58:21       0|0:93:31       1|0:100:52
+X      33406418        .       T       G       .       PASS    AA=G;DP=121     GT:GQ:DP        1|1:58:21       0|0:96:32       1|0:100:37
+5      151676359       rs13357566      A       G       .       PASS    AA=G;DP=88      GT:GQ:DP        1|1:58:22       0|0:24:17       1|0:100:49
+13     21326363        .       G       A       .       PASS    AA=A;DP=132     GT:GQ:DP        1|1:58:22       0|0:27:20       1|0:100:92
+8      49910441        rs9886604       G       A       .       PASS    AA=G;DP=95      GT:GQ:DP        1|1:58:22       0|0:48:16       1|0:100:57
+11     98112320        rs1550714       G       A       .       PASS    AA=A;DP=92      GT:GQ:DP        1|1:58:22       0|0:49:22       1|0:100:47
+6      129501518       rs11751534      C       T       .       PASS    AA=T;DP=89      GT:GQ:DP        1|1:58:22       0|0:51:17       1|0:100:49
+13     106227636       rs1485622       T       C       .       PASS    AA=C;DP=95      GT:GQ:DP        1|1:58:22       0|0:57:19       1|0:100:55
+3      176830395       rs59272023      A       C       .       PASS    AA=C;DP=100     GT:GQ:DP        1|1:58:22       0|0:60:20       1|0:100:55
+4      170087088       rs57137432      T       A       .       PASS    AA=t;DP=88      GT:GQ:DP        1|1:58:22       0|0:63:22       1|0:100:45
+14     96478353        rs856254        T       C       .       PASS    AA=C;DP=129     GT:GQ:DP        1|1:58:22       0|0:63:27       1|0:100:79
+1      190526115       rs7521847       G       A       .       PASS    AA=A;DP=107;HM2 GT:GQ:DP        1|1:58:22       0|0:69:23       1|0:100:64
+13     74135988        .       A       T       .       PASS    AA=A;DP=99      GT:GQ:DP        1|1:58:22       0|0:75:26       1|0:100:50
+4      143316534       rs10020099      A       G       .       PASS    AA=A;DP=118     GT:GQ:DP        1|1:58:22       0|0:81:27       1|0:100:69
+1      219411846       rs11118662      G       T       .       PASS    AA=G;DP=112;HM3 GT:GQ:DP        1|1:58:22       0|0:84:29       1|0:100:61
+12     17415525        rs10840695      G       A       .       PASS    AA=g;DP=106     GT:GQ:DP        1|1:58:23       0|0:60:20       1|0:100:66
+8      798721  rs35185084      C       G       .       PASS    AA=N;DP=104     GT:GQ:DP        1|1:58:23       0|0:63:21       1|0:100:62
+6      52168841        rs5015925       A       T       .       PASS    AA=A;DP=95      GT:GQ:DP        1|1:58:23       0|0:72:24       1|0:100:49
+7      122650223       rs35796706      A       G       .       PASS    AA=G;DP=101     GT:GQ:DP        1|1:58:23       0|0:81:29       1|0:100:50
+11     25527248        .       C       T       .       PASS    AA=C;DP=91      GT:GQ:DP        1|1:58:23       0|0:84:28       1|0:100:42
+11     5907667 rs11039699      G       A       .       PASS    AA=g;DP=96      GT:GQ:DP        1|1:58:24       0|0:60:20       1|0:100:40
+4      138045862       rs7437733       T       G       .       PASS    AA=t;DP=89      GT:GQ:DP        1|1:58:24       1|1:38:22       1|1:100:31
+3      38597471        rs7430407       T       C       .       PASS    AA=C;DP=99      GT:GQ:DP        1|1:58:24       1|1:41:12       1|1:100:65
+18     58314656        rs628904        G       T       .       PASS    AA=T;DP=99      GT:GQ:DP        1|1:58:24       1|1:49:21       1|1:100:53
+3      146206381       rs6414359       T       C       .       PASS    AA=C;DP=97      GT:GQ:DP        1|1:58:24       1|1:65:21       1|1:100:52
+2      80558241        rs11682291      G       C       .       PASS    AA=G;DP=107     GT:GQ:DP        1|1:58:25       0|1:81:26       1|0:100:53
+5      50676354        rs10067551      A       C       .       PASS    AA=c;DP=104     GT:GQ:DP        1|1:58:25       1|0:100:27      1|1:50:52
+19     32962847        rs2052175       G       A       .       PASS    AA=.;DP=130     GT:GQ:DP        1|1:58:27       0|1:100:26      1|0:100:76
+5      140624668       rs13182561      A       G       .       PASS    AA=A;DP=121     GT:GQ:DP        1|1:58:27       0|1:96:29       1|0:100:69
+4      135472380       rs12649164      T       C       .       PASS    AA=T;DP=116     GT:GQ:DP        1|1:58:28       0|1:28:24       1|0:100:65
+18     1794619 rs11665587      A       C       .       PASS    AA=C;DP=106     GT:GQ:DP        1|1:58:28       1|1:56:17       1|1:100:62
+5      42830648        rs10941588      T       C       .       PASS    AA=T;DP=108     GT:GQ:DP        1|1:58:29       1|0:100:27      1|1:97:52
+6      40083269        rs2475490       T       C       .       PASS    AA=C;DP=140     GT:GQ:DP        1|1:58:29       1|1:100:35      1|1:100:74
+3      112047371       rs1975901       G       T       .       PASS    AA=T;DP=115     GT:GQ:DP        1|1:58:29       1|1:25:17       1|1:100:69
+12     99723863        rs10160884      G       A       .       PASS    AA=A;DP=115     GT:GQ:DP        1|1:58:29       1|1:27:15       1|1:100:71
+8      54419200        rs7841400       A       C       .       PASS    AA=C;DP=117     GT:GQ:DP        1|1:58:29       1|1:27:16       1|1:100:73
+9      100559375       rs422531        T       C       .       PASS    AA=T;DP=147     GT:GQ:DP        1|1:58:29       1|1:45:33       1|1:100:84
+5      4045802 rs626231        C       T       .       PASS    AA=T;DP=100     GT:GQ:DP        1|1:58:29       1|1:46:19       1|1:100:51
+4      171405514       rs1717087       T       G       .       PASS    AA=G;DP=141     GT:GQ:DP        1|1:58:29       1|1:46:26       1|1:100:85
+18     54913810        rs2320026       A       G       .       PASS    AA=G;DP=95      GT:GQ:DP        1|1:58:29       1|1:50:16       1|1:100:51
+15     98976801        rs4965686       G       T       .       PASS    AA=T;DP=131     GT:GQ:DP        1|1:58:29       1|1:53:16       1|1:100:86
+11     103044159       rs12365061      T       C       .       PASS    AA=C;DP=123     GT:GQ:DP        1|1:58:29       1|1:62:19       1|1:100:75
+9      109779657       rs530723        A       T       .       PASS    AA=T;DP=120     GT:GQ:DP        1|1:58:29       1|1:71:23       1|1:100:66
+15     34973306        rs12908044      C       A       .       PASS    AA=A;DP=114     GT:GQ:DP        1|1:58:29       1|1:72:28       1|1:100:58
+5      34662229        rs378551        A       G       .       PASS    AA=G;DP=115     GT:GQ:DP        1|1:58:29       1|1:80:26       1|1:100:60
+16     45298546        rs1645939       T       C       .       PASS    AA=C;DP=126     GT:GQ:DP        1|1:58:29       1|1:83:26       1|1:100:70
+4      127029876       rs955806        A       G       .       PASS    AA=A;DP=114     GT:GQ:DP        1|1:58:29       1|1:95:31       1|1:100:55
+5      103542683       rs6894006       A       G       .       PASS    AA=G;DP=125     GT:GQ:DP        1|1:58:30       0|1:65:25       1|0:100:71
+3      136914909       rs1374774       T       C       .       PASS    AA=T;DP=132     GT:GQ:DP        1|1:58:30       0|1:89:25       1|0:100:77
+19     57663765        rs1840997       G       A       .       PASS    AA=a;DP=91      GT:GQ:DP        1|1:58:30       1|1:38:13       1|1:100:38
+3      8954779 rs341770        T       G       .       PASS    AA=G;DP=141     GT:GQ:DP        1|1:58:31       1|0:100:37      1|1:100:70
+12     43554356        rs1506679       T       G       .       PASS    AA=T;DP=168     GT:GQ:DP        1|1:58:31       1|0:100:40      1|1:100:45
+6      119638613       rs6932066       T       G       .       PASS    AA=G;DP=128     GT:GQ:DP        1|1:58:32       0|1:100:20      1|0:100:75
+4      129971584       rs4975269       G       T       .       PASS    AA=T;DP=141     GT:GQ:DP        1|1:58:32       0|1:100:24      1|0:100:85
+13     26703991        rs4769548       C       T       .       PASS    AA=T;DP=101     GT:GQ:DP        1|1:58:32       0|1:100:28      1|0:74:34
+12     78285356        rs1245776       G       T       .       PASS    AA=G;DP=126     GT:GQ:DP        1|1:58:32       0|1:100:30      1|0:100:66
+1      245979314       rs841160        T       G       .       PASS    AA=G;DP=135;HM2;HM3     GT:GQ:DP        1|1:58:32       0|1:100:34      1|0:100:69
+3      102556240       rs1464361       T       C       .       PASS    AA=C;DP=149     GT:GQ:DP        1|1:58:34       0|1:91:38       1|0:100:77
+1      90228866        rs61771688      T       C       .       PASS    AA=T;DP=93      GT:GQ:DP        1|1:58:36       0|1:20:11       1|0:100:41
+3      158802084       rs6796484       C       T       .       PASS    AA=T;DP=117     GT:GQ:DP        1|1:59:18       1|1:100:41      1|1:100:57
+10     55542727        rs10763070      C       T       .       PASS    AA=T;DP=64      GT:GQ:DP        1|1:59:18       1|1:23:12       1|1:100:29
+13     66903547        rs1760863       G       A       .       PASS    AA=G;DP=85      GT:GQ:DP        1|1:59:18       1|1:23:7        1|1:100:60
+4      172301006       rs2136096       C       T       .       PASS    AA=T;DP=101     GT:GQ:DP        1|1:59:18       1|1:27:18       1|1:100:55
+10     84113905        rs1937957       T       G       .       PASS    AA=G;DP=77      GT:GQ:DP        1|1:59:18       1|1:29:19       1|1:100:41
+9      25160508        rs1925490       T       C       .       PASS    AA=t;DP=59      GT:GQ:DP        1|1:59:18       1|1:29:8        1|1:100:27
+13     81257740        rs4885772       C       A       .       PASS    AA=C;DP=82      GT:GQ:DP        1|1:59:18       1|1:30:16       1|1:97:45
+2      180229169       rs932114        G       A       .       PASS    AA=A;DP=70      GT:GQ:DP        1|1:59:18       1|1:31:14       1|1:100:26
+22     20342115        rs394073        A       G       .       PASS    AA=G;DP=85      GT:GQ:DP        1|1:59:18       1|1:33:13       1|1:100:54
+13     22022371        rs9317081       A       G       .       PASS    AA=A;DP=65      GT:GQ:DP        1|1:59:18       1|1:34:15       1|1:97:22
+13     22784236        rs518727        C       T       .       PASS    AA=C;DP=101     GT:GQ:DP        1|1:59:18       1|1:34:19       1|1:100:65
+9      132375195       rs7865294       A       G       .       PASS    AA=G;DP=76      GT:GQ:DP        1|1:59:18       1|1:35:12       1|1:100:36
+3      98327002        rs9812000       A       G       .       PASS    AA=a;DP=78      GT:GQ:DP        1|1:59:18       1|1:38:11       1|1:100:49
+6      166214788       rs2457987       T       C       .       PASS    AA=t;DP=79      GT:GQ:DP        1|1:59:18       1|1:38:18       1|1:100:44
+3      167341438       rs9824851       G       A       .       PASS    AA=A;DP=103     GT:GQ:DP        1|1:59:18       1|1:38:22       1|1:100:63
+1      30920580        rs1188382       T       G       .       PASS    AA=G;DP=92      GT:GQ:DP        1|1:59:18       1|1:38:27       1|1:100:47
+13     112296762       rs7995802       A       T       .       PASS    AA=T;DP=115     GT:GQ:DP        1|1:59:18       1|1:38:29       1|1:100:69
+1      93256220        rs659355        C       T       .       PASS    AA=c;DP=75      GT:GQ:DP        1|1:59:18       1|1:40:17       1|1:100:36
+2      6603766 rs1902657       G       A       .       PASS    AA=A;DP=77      GT:GQ:DP        1|1:59:18       1|1:40:17       1|1:100:42
+11     90117376        rs4753029       C       G       .       PASS    AA=G;DP=65      GT:GQ:DP        1|1:59:18       1|1:41:13       1|1:100:30
+4      10841388        rs11726519      G       A       .       PASS    AA=A;DP=89      GT:GQ:DP        1|1:59:18       1|1:41:13       1|1:100:58
+1      4501161 rs10915557      A       C       .       PASS    AA=C;DP=89;HM2  GT:GQ:DP        1|1:59:18       1|1:43:13       1|1:100:57
+10     54816487        rs1909418       G       A       .       PASS    AA=G;DP=101     GT:GQ:DP        1|1:59:18       1|1:43:24       1|1:100:61
+12     106310835       rs6539329       G       A       .       PASS    AA=G;DP=92      GT:GQ:DP        1|1:59:18       1|1:44:13       1|1:100:61
+17     78138445        rs6502124       A       G       .       PASS    AA=A;DP=81      GT:GQ:DP        1|1:59:18       1|1:47:14       1|1:100:49
+17     64711241        rs8081003       C       T       .       PASS    AA=T;DP=103     GT:GQ:DP        1|1:59:18       1|1:47:14       1|1:100:68
+14     40652366        rs4362302       C       T       .       PASS    AA=N;DP=62      GT:GQ:DP        1|1:59:18       1|1:47:15       1|1:100:19
+11     25047703        rs7117459       G       A       .       PASS    AA=G;DP=72      GT:GQ:DP        1|1:59:18       1|1:47:15       1|1:100:30
+3      134443462       rs2370049       C       T       .       PASS    AA=T;DP=83      GT:GQ:DP        1|1:59:18       1|1:49:15       1|1:100:49
+14     69911366        rs2332366       A       T       .       PASS    AA=A;DP=80      GT:GQ:DP        1|1:59:18       1|1:50:15       1|1:100:38
+3      165149584       rs3906101       T       C       .       PASS    AA=T;DP=80      GT:GQ:DP        1|1:59:18       1|1:50:15       1|1:100:46
+15     100064539       rs7169476       G       A       .       PASS    AA=A;DP=87      GT:GQ:DP        1|1:59:18       1|1:50:15       1|1:100:53
+8      626251  rs336437        A       C       .       PASS    AA=A;DP=88      GT:GQ:DP        1|1:59:18       1|1:50:15       1|1:100:54
+6      28095755        rs149976        A       G       .       PASS    AA=G;DP=95      GT:GQ:DP        1|1:59:18       1|1:50:15       1|1:100:63
+13     95827656        rs7324569       T       C       .       PASS    AA=T;DP=74      GT:GQ:DP        1|1:59:18       1|1:50:16       1|1:100:39
+19     23574198        rs2694514       C       T       .       PASS    AA=t;DP=66      GT:GQ:DP        1|1:59:18       1|1:53:16       1|1:100:28
+X      37301568        rs1005929       G       A       .       PASS    AA=A;DP=88      GT:GQ:DP        1|1:59:18       1|1:53:16       1|1:100:37
+6      169520354       rs9283855       C       T       .       PASS    AA=C;DP=85      GT:GQ:DP        1|1:59:18       1|1:53:16       1|1:100:51
+8      88465852        rs10106421      G       A       .       PASS    AA=G;DP=88      GT:GQ:DP        1|1:59:18       1|1:53:16       1|1:100:55
+X      58145003        rs4914295       T       C       .       PASS    AA=.;DP=106     GT:GQ:DP        1|1:59:18       1|1:53:24       1|1:100:37
+3      146718936       rs34134862      A       G       .       PASS    AA=G;DP=62      GT:GQ:DP        1|1:59:18       1|1:55:19       1|1:100:18
+10     84475279        rs2050460       T       A       .       PASS    AA=A;DP=71      GT:GQ:DP        1|1:59:18       1|1:56:17       1|1:100:36
+6      94841192        rs2535666       A       G       .       PASS    AA=G;DP=81      GT:GQ:DP        1|1:59:18       1|1:56:17       1|1:100:44
+7      81531962        rs10269983      A       G       .       PASS    AA=G;DP=76      GT:GQ:DP        1|1:59:18       1|1:56:18       1|1:100:36
+12     68342532        rs775510        T       A       .       PASS    AA=N;DP=79      GT:GQ:DP        1|1:59:18       1|1:56:23       1|1:100:38
+12     64403662        rs2358943       T       C       .       PASS    AA=C;DP=80      GT:GQ:DP        1|1:59:18       1|1:58:24       1|1:100:39
+14     86335282        rs1420934       G       A       .       PASS    AA=G;DP=106     GT:GQ:DP        1|1:59:18       1|1:58:29       1|1:100:59
+5      22746432        rs269025        T       G       .       PASS    AA=T;DP=72      GT:GQ:DP        1|1:59:18       1|1:59:18       1|1:100:26
+6      87008731        rs7740432       A       G       .       PASS    AA=.;DP=69      GT:GQ:DP        1|1:59:18       1|1:59:18       1|1:100:32
+3      100510000       rs2219974       C       A       .       PASS    AA=A;DP=88      GT:GQ:DP        1|1:59:18       1|1:59:18       1|1:100:40
+1      103550563       rs28690510      G       C       .       PASS    AA=.;DP=76      GT:GQ:DP        1|1:59:18       1|1:59:18       1|1:100:41
+10     131358597       rs10764893      G       T       .       PASS    AA=T;DP=86      GT:GQ:DP        1|1:59:18       1|1:59:18       1|1:100:49
+2      48891658        rs4256004       C       T       .       PASS    AA=T;DP=86      GT:GQ:DP        1|1:59:18       1|1:59:18       1|1:100:49
+2      72365404        rs11902025      C       G       .       PASS    AA=G;DP=81      GT:GQ:DP        1|1:59:18       1|1:59:19       1|1:100:42
+18     37103440        rs1390842       G       A       .       PASS    AA=A;DP=84      GT:GQ:DP        1|1:59:18       1|1:59:19       1|1:100:48
+14     62732821        rs61996607      A       G       .       PASS    AA=a;DP=99      GT:GQ:DP        1|1:59:18       1|1:59:19       1|1:100:61
+9      97703338        rs667018        G       A       .       PASS    AA=A;DP=98      GT:GQ:DP        1|1:59:18       1|1:59:19       1|1:100:64
+14     80212745        rs2619666       T       C       .       PASS    AA=C;DP=100     GT:GQ:DP        1|1:59:18       1|1:59:21       1|1:100:50
+6      71094490        rs653709        G       T       .       PASS    AA=t;DP=68      GT:GQ:DP        1|1:59:18       1|1:62:19       1|1:100:22
+4      131885157       rs306349        C       T       .       PASS    AA=T;DP=90      GT:GQ:DP        1|1:59:18       1|1:62:19       1|1:100:50
+2      56842858        rs2193813       A       G       .       PASS    AA=A;DP=76      GT:GQ:DP        1|1:59:18       1|1:62:20       1|1:100:24
+12     19091628        rs1606764       C       G       .       PASS    AA=G;DP=107     GT:GQ:DP        1|1:59:18       1|1:62:20       1|1:100:72
+1      88625737        rs10801883      A       T       .       PASS    AA=A;DP=80      GT:GQ:DP        1|1:59:18       1|1:65:20       1|1:100:30
+5      51292197        rs4455503       G       A       .       PASS    AA=A;DP=78      GT:GQ:DP        1|1:59:18       1|1:65:20       1|1:100:40
+4      183624316       rs9884867       G       A       .       PASS    AA=A;DP=97      GT:GQ:DP        1|1:59:18       1|1:65:21       1|1:100:58
+7      18246461        rs302140        G       A       .       PASS    AA=A;DP=99      GT:GQ:DP        1|1:59:18       1|1:65:22       1|1:100:62
+2      196989208       rs6434852       T       A       .       PASS    AA=T;DP=112     GT:GQ:DP        1|1:59:18       1|1:68:21       1|1:100:32
+X      51904732        rs5943699       G       A       .       PASS    AA=.;DP=100     GT:GQ:DP        1|1:59:18       1|1:68:21       1|1:100:36
+1      47530785        rs3125627       A       T       .       PASS    AA=T;DP=83      GT:GQ:DP        1|1:59:18       1|1:68:21       1|1:100:43
+12     33268379        rs1563623       A       G       .       PASS    AA=G;DP=111     GT:GQ:DP        1|1:59:18       1|1:68:21       1|1:100:60
+7      70649406        rs6460669       G       A       .       PASS    AA=G;DP=101     GT:GQ:DP        1|1:59:18       1|1:68:21       1|1:100:61
+X      64974913        rs5918572       T       C       .       PASS    AA=C;DP=107     GT:GQ:DP        1|1:59:18       1|1:68:22       1|1:100:41
+6      66870000        rs851458        T       G       .       PASS    AA=G;DP=86      GT:GQ:DP        1|1:59:18       1|1:68:22       1|1:100:45
+13     43652416        rs4942289       C       T       .       PASS    AA=T;DP=91      GT:GQ:DP        1|1:59:18       1|1:68:22       1|1:100:49
+3      159689187       rs1714527       G       A       .       PASS    AA=A;DP=101     GT:GQ:DP        1|1:59:18       1|1:68:22       1|1:100:61
+4      18500188        rs4399987       A       G       .       PASS    AA=G;DP=105     GT:GQ:DP        1|1:59:18       1|1:68:22       1|1:100:68
+X      39370064        rs5917854       C       T       .       PASS    AA=T;DP=90      GT:GQ:DP        1|1:59:18       1|1:68:25       1|1:100:34
+X      142421915       rs11096054      G       A       .       PASS    AA=N;DP=104     GT:GQ:DP        1|1:59:18       1|1:71:22       1|1:100:25
+1      227002698       rs10218459      C       T       .       PASS    AA=C;DP=86      GT:GQ:DP        1|1:59:18       1|1:71:22       1|1:100:42
+6      137636611       rs2807887       G       A       .       PASS    AA=A;DP=83      GT:GQ:DP        1|1:59:18       1|1:71:22       1|1:100:43
+8      35204478        rs982615        C       T       .       PASS    AA=T;DP=107     GT:GQ:DP        1|1:59:18       1|1:71:22       1|1:100:62
+8      84997443        rs7834265       G       A       .       PASS    AA=A;DP=116     GT:GQ:DP        1|1:59:18       1|1:71:22       1|1:100:78
+14     83785753        rs4271531       G       A       .       PASS    AA=A;DP=96      GT:GQ:DP        1|1:59:18       1|1:71:23       1|1:100:44
+3      131252706       rs2718850       G       A       .       PASS    AA=-;DP=98      GT:GQ:DP        1|1:59:18       1|1:74:23       1|1:100:58
+12     125139525       rs7977825       C       T       .       PASS    AA=T;DP=105     GT:GQ:DP        1|1:59:18       1|1:74:25       1|1:100:62
+16     62078277        rs1364158       T       C       .       PASS    AA=C;DP=108     GT:GQ:DP        1|1:59:18       1|1:77:24       1|1:100:64
+16     59505452        rs7193227       A       G       .       PASS    AA=G;DP=82      GT:GQ:DP        1|1:59:18       1|1:77:25       1|1:100:40
+2      234808689       rs4663365       T       C       .       PASS    AA=T;DP=96      GT:GQ:DP        1|1:59:18       1|1:77:25       1|1:100:54
+14     60515720        rs7142228       A       G       .       PASS    AA=G;DP=130     GT:GQ:DP        1|1:59:18       1|1:77:26       1|1:100:88
+13     19547267        rs818209        A       G       .       PASS    AA=G;DP=111     GT:GQ:DP        1|1:59:18       1|1:80:26       1|1:100:69
+5      39930406        rs490982        A       G       .       PASS    AA=G;DP=113     GT:GQ:DP        1|1:59:18       1|1:80:26       1|1:100:71
+18     70572857        rs547054        T       C       .       PASS    AA=T;DP=113     GT:GQ:DP        1|1:59:18       1|1:80:27       1|1:100:67
+9      92453078        rs10993618      G       A       .       PASS    AA=a;DP=99      GT:GQ:DP        1|1:59:18       1|1:83:26       1|1:100:54
+3      54441305        rs9818236       C       T       .       PASS    AA=T;DP=100     GT:GQ:DP        1|1:59:18       1|1:83:26       1|1:100:55
+5      143076857       rs2059129       C       T       .       PASS    AA=T;DP=95      GT:GQ:DP        1|1:59:18       1|1:83:26       1|1:100:55
+7      125560724       rs7779276       G       A       .       PASS    AA=G;DP=99      GT:GQ:DP        1|1:59:18       1|1:83:26       1|1:100:55
+3      65960660        rs2888304       G       T       .       PASS    AA=T;DP=101     GT:GQ:DP        1|1:59:18       1|1:83:26       1|1:100:56
+5      166064209       rs347432        G       A       .       PASS    AA=A;DP=110     GT:GQ:DP        1|1:59:18       1|1:83:26       1|1:100:66
+8      16310439        rs28779170      T       A       .       PASS    AA=a;DP=116     GT:GQ:DP        1|1:59:18       1|1:86:27       1|1:100:62
+10     20395765        rs6482084       A       T       .       PASS    AA=T;DP=77      GT:GQ:DP        1|1:59:18       1|1:86:27       1|1:95:33
+X      56049548        rs944611        T       C       .       PASS    AA=N;DP=123     GT:GQ:DP        1|1:59:18       1|1:89:28       1|1:100:47
+8      61033073        rs782022        G       A       .       PASS    AA=A;DP=110     GT:GQ:DP        1|1:59:18       1|1:89:28       1|1:100:60
+12     54127089        rs11171464      T       C       .       PASS    AA=C;DP=107     GT:GQ:DP        1|1:59:18       1|1:89:28       1|1:100:65
+X      21890287        .       A       G       .       PASS    AA=A;DP=111     GT:GQ:DP        1|1:59:18       1|1:95:30       1|1:100:29
+X      136357052       rs2064155       A       G       .       PASS    AA=N;DP=143     GT:GQ:DP        1|1:59:18       1|1:98:36       1|1:100:60
+6      140937816       rs9403191       C       T       .       PASS    AA=T;DP=71      GT:GQ:DP        1|1:59:19       1|1:22:17       1|1:100:29
+3      26156015        rs6802436       C       T       .       PASS    AA=T;DP=64      GT:GQ:DP        1|1:59:19       1|1:26:7        1|1:100:37
+8      2890955 rs7388565       G       T       .       PASS    AA=g;DP=92      GT:GQ:DP        1|1:59:19       1|1:29:19       1|1:100:54
+2      50407550        rs7556697       T       C       .       PASS    AA=C;DP=76      GT:GQ:DP        1|1:59:19       1|1:40:18       1|1:100:39
+11     97362707        rs10891149      G       C       .       PASS    AA=C;DP=65      GT:GQ:DP        1|1:59:19       1|1:41:12       1|1:100:23
+6      974615  rs1737686       A       G       .       PASS    AA=G;DP=98      GT:GQ:DP        1|1:59:19       1|1:43:19       1|1:100:56
+1      189760073       rs621881        G       T       .       PASS    AA=T;DP=81;HM2;HM3      GT:GQ:DP        1|1:59:19       1|1:44:13       1|1:100:49
+5      27761056        rs7710383       A       T       .       PASS    AA=T;DP=71      GT:GQ:DP        1|1:59:19       1|1:47:14       1|1:100:27
+7      84869377        rs891339        G       A       .       PASS    AA=A;DP=79      GT:GQ:DP        1|1:59:19       1|1:47:14       1|1:100:34
+11     112870294       rs4936275       C       T       .       PASS    AA=T;DP=92      GT:GQ:DP        1|1:59:19       1|1:50:16       1|1:100:58
+16     80722836        rs8046093       G       A       .       PASS    AA=A;DP=87      GT:GQ:DP        1|1:59:19       1|1:50:17       1|1:100:39
+3      108325944       rs7629307       A       C       .       PASS    AA=N;DP=60      GT:GQ:DP        1|1:59:19       1|1:50:17       1|1:82:17
+12     60745617        rs348653        C       T       .       PASS    AA=C;DP=86      GT:GQ:DP        1|1:59:19       1|1:53:22       1|1:100:32
+4      125874142       rs6534449       C       T       .       PASS    AA=T;DP=82      GT:GQ:DP        1|1:59:19       1|1:56:17       1|1:100:42
+8      58695473        rs7827899       C       T       .       PASS    AA=T;DP=84      GT:GQ:DP        1|1:59:19       1|1:56:17       1|1:100:48
+4      136974939       rs4482827       G       A       .       PASS    AA=A;DP=81      GT:GQ:DP        1|1:59:19       1|1:56:18       1|1:100:46
+8      69394966        rs814453        C       T       .       PASS    AA=T;DP=85      GT:GQ:DP        1|1:59:19       1|1:56:18       1|1:100:47
+3      2453918 rs2648691       G       A       .       PASS    AA=A;DP=78      GT:GQ:DP        1|1:59:19       1|1:59:18       1|1:100:24
+5      161276527       rs7723554       T       C       .       PASS    AA=C;DP=75      GT:GQ:DP        1|1:59:19       1|1:59:18       1|1:100:38
+11     4796119 rs10836711      A       G       .       PASS    AA=G;DP=90      GT:GQ:DP        1|1:59:19       1|1:59:18       1|1:100:53
+4      141136208       rs4863716       T       C       .       PASS    AA=C;DP=93      GT:GQ:DP        1|1:59:19       1|1:59:18       1|1:100:55
+7      14661807        rs2462564       A       G       .       PASS    AA=G;DP=89      GT:GQ:DP        1|1:59:19       1|1:59:25       1|1:100:45
+8      25900278        rs7001315       A       G       .       PASS    AA=A;DP=118     GT:GQ:DP        1|1:59:19       1|1:60:24       1|1:100:75
+9      93323174        rs1444290       C       T       .       PASS    AA=T;DP=72      GT:GQ:DP        1|1:59:19       1|1:62:19       1|1:100:26
+2      141306175       rs8179554       A       G       .       PASS    AA=G;DP=74      GT:GQ:DP        1|1:59:19       1|1:62:19       1|1:100:32
+2      21593171        rs10865423      G       A       .       PASS    AA=A;DP=110     GT:GQ:DP        1|1:59:19       1|1:62:19       1|1:100:71
+10     36893416        rs1332769       G       A       .       PASS    AA=A;DP=86      GT:GQ:DP        1|1:59:19       1|1:62:20       1|1:100:46
+10     83164777        rs7904913       A       G       .       PASS    AA=G;DP=86      GT:GQ:DP        1|1:59:19       1|1:62:21       1|1:100:34
+11     19278728        rs793246        G       A       .       PASS    AA=A;DP=91      GT:GQ:DP        1|1:59:19       1|1:62:21       1|1:100:50
+1      178473731       rs355633        C       T       .       PASS    AA=T;DP=97      GT:GQ:DP        1|1:59:19       1|1:65:21       1|1:100:51
+4      159652379       rs7375226       A       G       .       PASS    AA=G;DP=79      GT:GQ:DP        1|1:59:19       1|1:71:22       1|1:100:27
+1      168671416       rs1333138       G       A       .       PASS    AA=A;DP=90;HM2  GT:GQ:DP        1|1:59:19       1|1:71:22       1|1:100:51
+5      74915646        rs5744680       G       A       .       PASS    AA=A;DP=91      GT:GQ:DP        1|1:59:19       1|1:74:23       1|1:100:54
+9      26090096        rs9298881       G       A       .       PASS    AA=A;DP=111     GT:GQ:DP        1|1:59:19       1|1:77:25       1|1:100:56
+9      3087969 rs7861507       C       T       .       PASS    AA=T;DP=111     GT:GQ:DP        1|1:59:19       1|1:77:25       1|1:100:66
+10     106428821       rs7078991       C       T       .       PASS    AA=T;DP=109     GT:GQ:DP        1|1:59:19       1|1:80:25       1|1:100:65
+11     115250383       rs10790102      A       G       .       PASS    AA=G;DP=109     GT:GQ:DP        1|1:59:19       1|1:83:26       1|1:100:60
+2      40741005        rs7595094       C       A       .       PASS    AA=A;DP=84      GT:GQ:DP        1|1:59:19       1|1:89:28       1|1:100:37
+1      75896212        rs814893        G       C       .       PASS    AA=C;DP=115     GT:GQ:DP        1|1:59:19       1|1:95:31       1|1:100:62
+9      88238990        rs353802        A       T       .       PASS    AA=T;DP=133     GT:GQ:DP        1|1:59:19       1|1:95:32       1|1:100:80
+4      23387448        rs1388331       G       A       .       PASS    AA=A;DP=110     GT:GQ:DP        1|1:59:20       1|1:46:20       1|1:100:71
+4      177583025       rs897041        A       G       .       PASS    AA=a;DP=93      GT:GQ:DP        1|1:59:20       1|1:56:18       1|1:100:55
+3      36144208        rs13324977      G       A       .       PASS    AA=A;DP=71      GT:GQ:DP        1|1:59:20       1|1:62:19       1|1:100:29
+5      54066910        rs12516870      T       C       .       PASS    AA=C;DP=101     GT:GQ:DP        1|1:59:20       1|1:74:24       1|1:100:58
+2      153787682       rs6721744       A       C       .       PASS    AA=C;DP=80      GT:GQ:DP        1|1:59:21       1|1:45:20       1|1:100:26
+1      105155758       rs7523011       C       T       .       PASS    AA=T;DP=94      GT:GQ:DP        1|1:59:21       1|1:50:16       1|1:100:59
+8      142672434       rs34501216      C       T       .       PASS    AA=C;DP=83      GT:GQ:DP        1|1:59:22       0|0:4:14        1|0:100:47
+11     44047638        rs178517        T       C       .       PASS    AA=C;DP=76      GT:GQ:DP        1|1:59:22       0|1:40:12       1|0:93:36
+6      161873066       rs482420        T       C       .       PASS    AA=C;DP=97      GT:GQ:DP        1|1:59:22       1|1:68:22       1|1:100:53
+7      157909524       rs7779183       A       C       .       PASS    AA=C;DP=95      GT:GQ:DP        1|1:59:23       1|1:41:13       1|1:100:56
+21     40845296        rs8132941       A       C       .       PASS    AA=A;DP=111     GT:GQ:DP        1|1:59:24       0|0:75:26       1|0:100:61
+8      132380661       rs4380914       G       A       .       PASS    AA=G;DP=94      GT:GQ:DP        1|1:59:24       0|1:59:17       1|0:100:55
+5      107843224       rs6594306       T       C       .       PASS    AA=C;DP=112     GT:GQ:DP        1|1:59:24       1|1:66:24       1|1:100:63
+5      101369136       rs5020201       C       G       .       PASS    AA=G;DP=101     GT:GQ:DP        1|1:59:24       1|1:74:24       1|1:100:54
+4      101886563       rs1581011       T       C       .       PASS    AA=C;DP=105     GT:GQ:DP        1|1:59:24       1|1:83:27       1|1:100:55
+22     32330230        rs695504        T       C       .       PASS    AA=C;DP=148     GT:GQ:DP        1|1:59:24       1|1:98:32       1|1:100:93
+4      56969436        rs6554356       C       T       .       PASS    AA=T;DP=75      GT:GQ:DP        1|1:59:25       1|1:29:8        1|1:100:43
+7      35475384        rs343044        A       G       .       PASS    AA=G;DP=100     GT:GQ:DP        1|1:59:25       1|1:35:10       1|1:100:62
+6      168337440       rs4385284       G       A       .       PASS    AA=G;DP=101     GT:GQ:DP        1|1:59:25       1|1:35:10       1|1:100:67
+14     66282721        rs6573720       G       A       .       PASS    AA=G;DP=106     GT:GQ:DP        1|1:59:25       1|1:59:19       1|1:100:63
+8      71233342        rs2977983       T       C       .       PASS    AA=t;DP=89      GT:GQ:DP        1|1:59:25       1|1:60:20       1|1:100:44
+10     33533339        rs2474716       A       G       .       PASS    AA=G;DP=107     GT:GQ:DP        1|1:59:25       1|1:61:27       1|1:100:42
+11     12782097        rs9888152       T       C       .       PASS    AA=C;DP=129     GT:GQ:DP        1|1:59:25       1|1:68:22       1|1:100:46
+15     71069779        rs6495042       T       C       .       PASS    AA=C;DP=114     GT:GQ:DP        1|1:59:26       1|1:71:22       1|1:100:64
+1      3488911 rs2794336       C       A       .       PASS    AA=T;DP=111     GT:GQ:DP        1|1:59:27       0|0:57:19       1|0:100:66
+5      5303209 rs2913642       G       A       .       PASS    AA=G;DP=121     GT:GQ:DP        1|1:59:27       0|1:100:16      1|0:100:80
+6      104334424       rs4507628       A       C       .       PASS    AA=C;DP=124     GT:GQ:DP        1|1:59:27       1|0:100:24      1|1:100:74
+13     88649943        rs9301544       A       T       .       PASS    AA=A;DP=75      GT:GQ:DP        1|1:59:27       1|0:69:16       1|1:54:27
+3      13543415        rs2597522       T       C       .       PASS    AA=C;DP=88      GT:GQ:DP        1|1:59:27       1|1:4:4 1|1:100:46
+6      166392584       rs1664210       T       C       .       PASS    AA=C;DP=123     GT:GQ:DP        1|1:59:27       1|1:74:24       1|1:100:67
+10     124541476       rs10751763      G       A       .       PASS    AA=G;DP=139     GT:GQ:DP        1|1:59:28       0|0:69:23       1|0:100:89
+1      98954560        rs11806350      A       G       .       PASS    AA=A;DP=144;HM2 GT:GQ:DP        1|1:59:28       0|0:96:32       1|0:100:88
+5      81138651        rs4464673       G       C       .       PASS    AA=C;DP=115     GT:GQ:DP        1|1:59:28       0|1:100:22      1|0:100:63
+14     20297540        rs11850526      A       G       .       PASS    AA=A;DP=95      GT:GQ:DP        1|1:59:28       1|1:44:17       1|1:100:52
+9      109455827       rs4978532       A       C       .       PASS    AA=C;DP=132     GT:GQ:DP        1|1:59:28       1|1:59:25       1|1:100:74
+4      11662861        rs16886593      T       G       .       PASS    AA=G;DP=129     GT:GQ:DP        1|1:59:29       0|0:48:17       1|0:100:42
+9      12468955        rs7852110       G       C       .       PASS    AA=G;DP=112     GT:GQ:DP        1|1:59:29       0|0:87:29       1|0:100:54
+8      129357942       rs56027020      C       A       .       PASS    AA=C;DP=124     GT:GQ:DP        1|1:59:29       0|0:93:31       1|0:100:65
+8      75983942        rs2731992       C       A       .       PASS    AA=A;DP=99      GT:GQ:DP        1|1:59:29       0|1:72:18       1|0:100:53
+3      103482271       rs7618733       G       T       .       PASS    AA=G;DP=137     GT:GQ:DP        1|1:59:30       0|0:41:25       1|0:100:79
+6      73277777        rs16882485      T       C       .       PASS    AA=T;DP=107     GT:GQ:DP        1|1:59:30       0|0:60:21       1|0:100:56
+16     70880799        rs7201904       A       G       .       PASS    AA=G;DP=157     GT:GQ:DP        1|1:59:30       0|0:90:31       1|0:100:95
+19     59515989        rs1645785       C       T       .       PASS    AA=T;DP=99      GT:GQ:DP        1|1:59:30       0|1:63:15       1|0:100:54
+11     60539702        rs3019556       C       T       .       PASS    AA=T;DP=87      GT:GQ:DP        1|1:59:30       1|1:50:15       1|1:100:34
+11     102811012       rs680713        A       T       .       PASS    AA=A;DP=134     GT:GQ:DP        1|1:59:30       1|1:98:31       1|1:100:55
+6      165934585       rs828562        A       G       .       PASS    AA=G;DP=119     GT:GQ:DP        1|1:59:31       0|1:100:20      1|0:100:68
+14     100579813       rs2281610       T       C       .       PASS    AA=C;DP=134     GT:GQ:DP        1|1:59:32       1|1:44:15       1|1:100:84
+13     31673401        rs2520703       A       T       .       PASS    AA=A;DP=140     GT:GQ:DP        1|1:59:33       0|0:48:25       1|0:100:44
+2      238104052       rs2875755       C       G       .       PASS    AA=G;DP=125     GT:GQ:DP        1|1:59:33       0|0:51:18       1|0:100:59
+6      93223450        rs1946407       A       G       .       PASS    AA=A;DP=118     GT:GQ:DP        1|1:59:33       0|0:66:22       1|0:100:65
+5      158866873       rs10058305      C       T       .       PASS    AA=C;DP=127     GT:GQ:DP        1|1:59:33       0|0:72:25       1|0:100:71
+2      220383961       rs10932827      T       G       .       PASS    AA=a;DP=109     GT:GQ:DP        1|1:59:33       0|1:54:20       1|0:100:58
+1      167942847       rs2205847       G       T       .       PASS    AA=T;DP=153;HM2;HM3     GT:GQ:DP        1|1:59:37       0|0:84:40       1|0:100:75
+5      8167152 .       A       G       .       PASS    AA=a;DP=78      GT:GQ:DP        1|1:5:11        0|1:19:13       1|0:100:55
+X      142822847       rs5953896       A       T       .       PASS    AA=A;DP=89      GT:GQ:DP        1|1:5:11        0|1:54:17       1|0:82:21
+X      143804977       rs2142789       T       A       .       PASS    AA=t;DP=67      GT:GQ:DP        1|1:5:12        0|0:45:15       1|0:100:28
+X      75252981        .       A       T       .       PASS    AA=-;DP=96      GT:GQ:DP        1|1:5:14        0|0:66:22       1|0:100:42
+14     59957653        rs1254306       C       T       .       PASS    AA=T;DP=72      GT:GQ:DP        1|1:5:15        1|1:22:17       1|1:51:28
+X      78635124        rs4826103       T       C       .       PASS    AA=T;DP=85      GT:GQ:DP        1|1:5:16        0|0:57:19       1|0:100:26
+1      198528111       rs2140558       A       T       .       PASS    AA=A;DP=71      GT:GQ:DP        1|1:5:18        0|1:7:12        1|0:100:40
+4      22983580        rs10012040      T       A       .       PASS    AA=-;DP=60      GT:GQ:DP        1|1:5:20        0|0:33:11       1|0:53:25
+3      152094175       rs9681173       G       T       .       PASS    AA=-;DP=75      GT:GQ:DP        1|1:5:23        0|0:29:15       1|0:100:29
+3      24059531        rs17014075      C       A       .       PASS    AA=C;DP=108     GT:GQ:DP        1|1:5:28        0|1:47:21       1|0:100:60
+X      6397944 .       G       T       .       PASS    AA=G;DP=66      GT:GQ:DP        1|1:5:3 0|1:9:19        1|0:100:26
+3      84230020        rs6778602       C       A       .       PASS    AA=C;DP=70      GT:GQ:DP        1|1:60:20       1|0:100:12      1|1:90:30
+12     91351732        rs394283        G       T       .       PASS    AA=T;DP=80      GT:GQ:DP        1|1:60:20       1|0:100:15      1|1:81:45
+13     70894776        rs1931454       C       T       .       PASS    AA=T;DP=83      GT:GQ:DP        1|1:60:20       1|0:100:15      1|1:95:47
+4      15222878        rs9884443       T       C       .       PASS    AA=C;DP=81      GT:GQ:DP        1|1:60:20       1|0:100:15      1|1:98:43
+1      107186150       rs1519875       G       A       .       PASS    AA=A;DP=88;HM2;HM3      GT:GQ:DP        1|1:60:20       1|0:100:16      1|1:100:53
+16     61999810        rs4949125       T       C       .       PASS    AA=C;DP=77      GT:GQ:DP        1|1:60:20       1|0:100:17      1|1:100:41
+8      18676968        rs7823903       C       A       .       PASS    AA=A;DP=91      GT:GQ:DP        1|1:60:20       1|0:100:20      1|1:100:50
+8      61832867        rs1038352       A       G       .       PASS    AA=G;DP=74      GT:GQ:DP        1|1:60:20       1|0:100:21      1|1:84:28
+6      9397723 rs9393513       T       C       .       PASS    AA=C;DP=91      GT:GQ:DP        1|1:60:20       1|0:100:22      1|1:100:48
+2      210000426       rs2028893       C       T       .       PASS    AA=C;DP=103     GT:GQ:DP        1|1:60:20       1|0:100:22      1|1:100:60
+3      430787  rs9810457       G       A       .       PASS    AA=A;DP=83      GT:GQ:DP        1|1:60:20       1|0:100:22      1|1:66:22
+9      100042360       rs57133157      G       C       .       PASS    AA=G;DP=111     GT:GQ:DP        1|1:60:20       1|0:100:24      1|1:100:67
+17     14266546        rs28663266      C       T       .       PASS    AA=T;DP=117     GT:GQ:DP        1|1:60:20       1|0:100:24      1|1:100:73
+4      85284334        rs2903938       A       G       .       PASS    AA=-;DP=107     GT:GQ:DP        1|1:60:20       1|0:100:26      1|1:100:60
+3      77719442        rs775737        G       C       .       PASS    AA=C;DP=124     GT:GQ:DP        1|1:60:20       1|0:100:26      1|1:100:67
+6      46343065        rs4714911       C       T       .       PASS    AA=C;DP=81      GT:GQ:DP        1|1:60:20       1|0:100:27      1|1:70:35
+3      86605067        rs291952        C       A       .       PASS    AA=A;DP=97      GT:GQ:DP        1|1:60:20       1|0:100:28      1|1:100:36
+12     94354679        rs159851        A       G       .       PASS    AA=a;DP=99      GT:GQ:DP        1|1:60:20       1|0:100:28      1|1:100:37
+9      17717219        rs2224957       A       G       .       PASS    AA=a;DP=115     GT:GQ:DP        1|1:60:20       1|0:100:29      1|1:100:66
+4      101802860       rs58888172      G       A       .       PASS    AA=G;DP=111     GT:GQ:DP        1|1:60:20       1|0:100:31      1|1:100:60
+3      5089680 rs7644276       G       A       .       PASS    AA=G;DP=118     GT:GQ:DP        1|1:60:20       1|0:100:31      1|1:100:67
+13     33948194        rs7983631       G       A       .       PASS    AA=A;DP=108     GT:GQ:DP        1|1:60:20       1|0:100:32      1|1:100:56
+3      185167943       rs4148579       T       C       .       PASS    AA=C;DP=104     GT:GQ:DP        1|1:60:20       1|0:16:11       1|1:100:70
+8      17803218        rs426390        T       G       .       PASS    AA=G;DP=117     GT:GQ:DP        1|1:60:20       1|0:38:20       1|1:100:77
+22     47936034        rs9616249       C       T       .       PASS    AA=N;DP=64      GT:GQ:DP        1|1:60:20       1|0:51:7        1|1:65:31
+18     1826235 rs1583735       G       A       .       PASS    AA=A;DP=74      GT:GQ:DP        1|1:60:20       1|0:52:11       1|1:34:42
+11     97331320        rs7947331       G       A       .       PASS    AA=A;DP=81      GT:GQ:DP        1|1:60:20       1|0:53:13       1|1:95:50
+16     72634026        rs2716599       T       C       .       PASS    AA=C;DP=70      GT:GQ:DP        1|1:60:20       1|0:57:11       1|1:100:38
+17     64462048        rs4147948       G       A       .       PASS    AA=G;DP=113     GT:GQ:DP        1|1:60:20       1|0:66:15       1|1:100:79
+5      53024139        rs12654088      C       T       .       PASS    AA=C;DP=76      GT:GQ:DP        1|1:60:20       1|0:75:18       1|1:78:26
+4      186678926       rs28375218      C       G       .       PASS    AA=G;DP=71      GT:GQ:DP        1|1:60:20       1|0:75:19       1|1:51:18
+1      175739500       rs4466607       C       G       .       PASS    AA=G;DP=102     GT:GQ:DP        1|1:60:20       1|0:78:12       1|1:100:70
+3      8877225 rs11919080      G       A       .       PASS    AA=A;DP=103     GT:GQ:DP        1|1:60:20       1|0:80:20       1|1:100:64
+2      195387930       rs13016766      A       G       .       PASS    AA=G;DP=74      GT:GQ:DP        1|1:60:20       1|0:81:13       1|1:87:29
+5      111555196       rs4957636       T       C       .       PASS    AA=t;DP=93      GT:GQ:DP        1|1:60:20       1|0:82:20       1|1:100:53
+11     84146844        rs11234161      G       T       .       PASS    AA=T;DP=95      GT:GQ:DP        1|1:60:20       1|0:84:17       1|1:100:57
+10     105751783       rs805656        G       A       .       PASS    AA=A;DP=84      GT:GQ:DP        1|1:60:20       1|0:94:19       1|1:100:46
+7      19169043        rs13438011      G       C       .       PASS    AA=C;DP=84      GT:GQ:DP        1|1:60:21       0|1:100:13      1|0:100:51
+1      30294875        rs12094129      G       T       .       PASS    AA=T;DP=123;HM2 GT:GQ:DP        1|1:60:21       0|1:100:14      1|0:100:90
+20     5789084 rs1699240       A       G       .       PASS    AA=A;DP=78      GT:GQ:DP        1|1:60:21       0|1:100:18      1|0:100:40
+2      141507446       .       T       C       .       PASS    AA=C;DP=86      GT:GQ:DP        1|1:60:21       0|1:100:18      1|0:100:47
+6      123128006       rs7754608       G       A       .       PASS    AA=A;DP=93      GT:GQ:DP        1|1:60:21       0|1:100:18      1|0:100:54
+18     60135278        rs2161047       C       T       .       PASS    AA=T;DP=91      GT:GQ:DP        1|1:60:21       0|1:100:20      1|0:100:51
+11     99323696        rs1453574       C       T       .       PASS    AA=T;DP=93      GT:GQ:DP        1|1:60:21       0|1:100:20      1|0:100:52
+2      236139468       rs7569541       C       T       .       PASS    AA=C;DP=105     GT:GQ:DP        1|1:60:21       0|1:100:20      1|0:100:63
+4      124108180       rs7668400       C       T       .       PASS    AA=C;DP=111     GT:GQ:DP        1|1:60:21       0|1:100:20      1|0:100:70
+14     53182368        rs172371        C       T       .       PASS    AA=T;DP=93      GT:GQ:DP        1|1:60:21       0|1:100:21      1|0:100:36
+1      105471866       rs7554044       C       T       .       PASS    AA=T;DP=85;HM2;HM3      GT:GQ:DP        1|1:60:21       0|1:100:21      1|0:100:43
+12     40026795        rs7298511       A       T       .       PASS    AA=T;DP=105     GT:GQ:DP        1|1:60:21       0|1:100:21      1|0:100:62
+4      110728635       rs12640500      G       T       .       PASS    AA=G;DP=96      GT:GQ:DP        1|1:60:21       0|1:100:22      1|0:100:58
+10     118416340       rs3010457       G       A       .       PASS    AA=a;DP=99      GT:GQ:DP        1|1:60:21       0|1:100:23      1|0:100:53
+5      133077096       rs7734373       G       A       .       PASS    AA=A;DP=144     GT:GQ:DP        1|1:60:21       0|1:100:25      1|0:100:51
+10     118954026       rs1678040       C       T       .       PASS    AA=C;DP=125     GT:GQ:DP        1|1:60:21       0|1:100:25      1|0:100:78
+3      21154299        rs1436827       A       T       .       PASS    AA=T;DP=99      GT:GQ:DP        1|1:60:21       0|1:100:26      1|0:100:39
+7      158082177       rs10235628      A       G       .       PASS    AA=G;DP=129     GT:GQ:DP        1|1:60:21       0|1:100:26      1|0:100:43
+2      174315752       rs16862069      G       C       .       PASS    AA=N;DP=102     GT:GQ:DP        1|1:60:21       0|1:100:26      1|0:100:57
+16     76181281        rs13333218      G       A       .       PASS    AA=G;DP=109     GT:GQ:DP        1|1:60:21       0|1:100:28      1|0:100:58
+2      145957684       rs6708800       A       G       .       PASS    AA=G;DP=117     GT:GQ:DP        1|1:60:21       0|1:100:29      1|0:100:68
+1      173486929       rs10912925      A       G       .       PASS    AA=A;DP=132;HM2;HM3     GT:GQ:DP        1|1:60:21       0|1:100:29      1|0:100:78
+4      111005966       rs7679303       A       G       .       PASS    AA=A;DP=128     GT:GQ:DP        1|1:60:21       0|1:100:31      1|0:100:72
+3      3769860 rs711547        C       T       .       PASS    AA=t;DP=145     GT:GQ:DP        1|1:60:21       0|1:100:39      1|0:100:85
+11     91980611        rs538547        C       T       .       PASS    AA=T;DP=77      GT:GQ:DP        1|1:60:21       0|1:45:16       1|0:100:38
+9      8104445 rs7042478       A       T       .       PASS    AA=A;DP=115     GT:GQ:DP        1|1:60:21       0|1:56:17       1|0:100:77
+3      66388126        rs13068257      A       G       .       PASS    AA=A;DP=104     GT:GQ:DP        1|1:60:21       0|1:65:25       1|0:100:62
+17     49069273        rs1508969       G       A       .       PASS    AA=G;DP=93      GT:GQ:DP        1|1:60:21       0|1:69:18       1|0:100:40
+19     33018912        rs7253872       G       A       .       PASS    AA=A;DP=109     GT:GQ:DP        1|1:60:21       0|1:73:17       1|0:100:73
+8      113936483       rs10955635      T       C       .       PASS    AA=T;DP=79      GT:GQ:DP        1|1:60:21       0|1:75:20       1|0:100:27
+5      178579994       rs411804        C       T       .       PASS    AA=T;DP=114     GT:GQ:DP        1|1:60:21       0|1:77:11       1|0:100:82
+6      32684539        rs9271104       G       A       .       PASS    AA=g;DP=93      GT:GQ:DP        1|1:60:21       0|1:77:23       1|0:100:46
+16     75014814        rs7203043       G       A       .       PASS    AA=A;DP=91      GT:GQ:DP        1|1:60:21       0|1:78:16       1|0:100:51
+5      144276695       rs11167874      C       T       .       PASS    AA=T;DP=112     GT:GQ:DP        1|1:60:21       0|1:88:27       1|0:100:64
+7      33438787        rs12665869      A       G       .       PASS    AA=G;DP=75      GT:GQ:DP        1|1:60:21       0|1:90:14       1|0:100:40
+X      136011876       rs61046326      T       G       .       PASS    AA=T;DP=137     GT:GQ:DP        1|1:60:21       0|1:90:28       1|0:100:50
+9      24813420        rs10966490      A       G       .       PASS    AA=A;DP=107     GT:GQ:DP        1|1:60:21       0|1:92:24       1|0:100:64
+6      134569379       rs9493856       C       T       .       PASS    AA=T;DP=77      GT:GQ:DP        1|1:60:21       0|1:93:14       1|0:100:40
+15     40150113        rs2459692       C       G       .       PASS    AA=G;DP=88      GT:GQ:DP        1|1:60:21       0|1:94:17       1|0:100:40
+8      94724256        rs4297014       A       G       .       PASS    AA=G;DP=89      GT:GQ:DP        1|1:60:21       0|1:96:17       1|0:100:50
+11     12676370        rs7105783       A       G       .       PASS    AA=A;DP=87      GT:GQ:DP        1|1:60:21       0|1:99:20       1|0:100:46
+1      82944096        rs61394849      A       G       .       PASS    AA=A;DP=85      GT:GQ:DP        1|1:60:21       1|0:100:16      1|1:100:35
+18     38089886        rs7228003       A       G       .       PASS    AA=G;DP=96      GT:GQ:DP        1|1:60:21       1|0:100:21      1|1:100:52
+10     27872139        rs10829270      G       A       .       PASS    AA=A;DP=120     GT:GQ:DP        1|1:60:21       1|0:100:28      1|1:100:68
+15     74783283        rs2585728       G       A       .       PASS    AA=A;DP=106     GT:GQ:DP        1|1:60:21       1|0:100:34      1|1:98:41
+19     2544328 .       C       G       .       PASS    AA=C;DP=79      GT:GQ:DP        1|1:60:21       1|0:87:12       1|1:86:45
+2      1599646 rs58394163      T       C       .       PASS    AA=t;DP=125     GT:GQ:DP        1|1:60:21       1|0:92:22       1|1:100:69
+8      139548340       rs10481405      A       G       .       PASS    AA=a;DP=118     GT:GQ:DP        1|1:60:21       1|1:65:30       1|1:100:72
+7      286506  rs60962057      A       G       .       PASS    AA=G;DP=100     GT:GQ:DP        1|1:60:22       0|1:100:16      1|0:100:62
+15     92391464        rs8042192       T       A       .       PASS    AA=A;DP=96      GT:GQ:DP        1|1:60:22       0|1:100:17      1|0:100:58
+22     17829473        rs5746740       T       G       .       PASS    AA=G;DP=104     GT:GQ:DP        1|1:60:22       0|1:100:17      1|0:100:64
+5      52458995        rs30093 C       G       .       PASS    AA=G;DP=86      GT:GQ:DP        1|1:60:22       0|1:100:18      1|0:100:47
+18     33983527        rs9304185       T       A       .       PASS    AA=A;DP=103     GT:GQ:DP        1|1:60:22       0|1:100:21      1|0:100:63
+9      25477028        rs9632876       G       A       .       PASS    AA=A;DP=118     GT:GQ:DP        1|1:60:22       0|1:100:21      1|0:100:78
+10     100510699       rs10786469      T       A       .       PASS    AA=T;DP=121     GT:GQ:DP        1|1:60:22       0|1:100:22      1|0:100:65
+14     96201745        rs1957819       T       C       .       PASS    AA=C;DP=116     GT:GQ:DP        1|1:60:22       0|1:100:22      1|0:100:70
+11     5465253 rs369016        G       C       .       PASS    AA=g;DP=90      GT:GQ:DP        1|1:60:22       0|1:100:23      1|0:100:45
+9      99956102        rs2476443       T       C       .       PASS    AA=C;DP=101     GT:GQ:DP        1|1:60:22       0|1:100:24      1|0:100:54
+6      36088690        rs7743315       T       C       .       PASS    AA=C;DP=122     GT:GQ:DP        1|1:60:22       0|1:100:25      1|0:100:75
+8      9618842 rs12676827      C       G       .       PASS    AA=G;DP=115     GT:GQ:DP        1|1:60:22       0|1:100:27      1|0:100:65
+X      63055995        rs6524862       C       T       .       PASS    AA=.;DP=136     GT:GQ:DP        1|1:60:22       0|1:100:28      1|0:100:41
+2      196787652       rs11902710      G       A       .       PASS    AA=G;DP=105     GT:GQ:DP        1|1:60:22       0|1:100:28      1|0:100:55
+1      34118613        rs12027527      C       G       .       PASS    AA=C;DP=112     GT:GQ:DP        1|1:60:22       0|1:100:32      1|0:100:59
+16     83096512        rs403308        T       G       .       PASS    AA=G;DP=90      GT:GQ:DP        1|1:60:22       0|1:47:15       1|0:100:52
+5      178682419       rs464610        G       A       .       PASS    AA=G;DP=93      GT:GQ:DP        1|1:60:22       0|1:54:13       1|0:100:57
+2      172738109       rs2171320       T       C       .       PASS    AA=C;DP=80      GT:GQ:DP        1|1:60:22       0|1:69:11       1|0:100:42
+9      111961151       rs7855791       C       G       .       PASS    AA=G;DP=120     GT:GQ:DP        1|1:60:22       0|1:74:27       1|0:100:71
+5      150293744       .       C       T       .       PASS    AA=C;DP=97      GT:GQ:DP        1|1:60:22       0|1:83:21       1|0:100:54
+2      209196691       rs13019777      T       A       .       PASS    AA=-;DP=101     GT:GQ:DP        1|1:60:22       0|1:84:26       1|0:100:48
+2      35729599        rs6741579       T       A       .       PASS    AA=t;DP=99      GT:GQ:DP        1|1:60:22       0|1:86:18       1|0:100:56
+5      170403556       rs2441016       A       G       .       PASS    AA=G;DP=101     GT:GQ:DP        1|1:60:22       1|0:100:19      1|1:100:54
+15     54290436        rs2713934       C       T       .       PASS    AA=T;DP=99      GT:GQ:DP        1|1:60:22       1|0:100:22      1|1:100:57
+18     29207354        rs4335838       G       A       .       PASS    AA=N;DP=99      GT:GQ:DP        1|1:60:22       1|0:60:17       1|1:100:62
+9      120094868       rs7040889       T       C       .       PASS    AA=C;DP=106     GT:GQ:DP        1|1:60:22       1|0:91:25       1|1:100:60
+2      197727863       rs2712877       T       C       .       PASS    AA=C;DP=117     GT:GQ:DP        1|1:60:23       0|1:11:25       1|0:100:66
+6      78901792        rs6454041       A       T       .       PASS    AA=T;DP=94      GT:GQ:DP        1|1:60:23       0|1:54:19       1|0:100:41
+12     43905061        rs35660715      T       C       .       PASS    AA=C;DP=108     GT:GQ:DP        1|1:60:23       0|1:65:23       1|0:100:64
+4      22927714        rs59832046      A       G       .       PASS    AA=G;DP=91      GT:GQ:DP        1|1:60:23       0|1:74:18       1|0:100:50
+3      126944624       rs2971282       C       G       .       PASS    AA=.;DP=85      GT:GQ:DP        1|1:60:23       1|1:9:19        1|1:67:33
+2      108069523       rs1385953       A       G       .       PASS    AA=.;DP=127     GT:GQ:DP        1|1:60:24       0|1:94:26       1|0:100:78
+10     67984543        rs2660027       T       C       .       PASS    AA=T;DP=83      GT:GQ:DP        1|1:60:24       1|1:29:9        1|1:100:50
+1      4931239 rs10799149      G       A       .       PASS    AA=A;DP=110;HM2;HM3     GT:GQ:DP        1|1:60:24       1|1:50:16       1|1:100:72
+6      153971781       rs4870206       T       C       .       PASS    AA=T;DP=102     GT:GQ:DP        1|1:60:24       1|1:61:26       1|1:100:51
+12     19683841        rs7305400       A       G       .       PASS    AA=G;DP=107     GT:GQ:DP        1|1:60:24       1|1:80:25       1|1:100:59
+3      51678104        rs6775666       A       G       .       PASS    AA=G;DP=136     GT:GQ:DP        1|1:60:24       1|1:86:29       1|1:100:87
+18     61448652        rs2012927       A       G       .       PASS    AA=A;DP=113     GT:GQ:DP        1|1:60:26       1|0:100:30      1|1:100:57
+6      120905576       rs2474351       C       T       .       PASS    AA=C;DP=108     GT:GQ:DP        1|1:60:27       0|0:42:15       1|0:100:66
+7      38356608        rs2735132       A       G       .       PASS    AA=N;DP=81      GT:GQ:DP        1|1:60:27       1|1:17:14       1|1:79:32
+10     43981617        rs2804041       A       C       .       PASS    AA=C;DP=118     GT:GQ:DP        1|1:60:27       1|1:25:15       1|1:100:77
+3      59458320        rs1394595       A       C       .       PASS    AA=c;DP=104     GT:GQ:DP        1|1:60:27       1|1:47:14       1|1:100:63
+15     55903679        rs2414522       C       A       .       PASS    AA=A;DP=130     GT:GQ:DP        1|1:60:27       1|1:89:28       1|1:100:75
+1      151792041       .       A       G       .       PASS    AA=G;DP=95      GT:GQ:DP        1|1:60:28       0|0:36:12       1|0:100:53
+22     17679697        rs4819794       A       T       .       PASS    AA=A;DP=95      GT:GQ:DP        1|1:60:28       1|1:11:13       1|1:81:44
+20     5500847 rs6085211       G       C       .       PASS    AA=C;DP=129     GT:GQ:DP        1|1:60:28       1|1:36:19       1|1:100:82
+8      57344907        rs4601281       T       C       .       PASS    AA=C;DP=75      GT:GQ:DP        1|1:60:29       0|0:25:15       1|0:100:22
+19     37885360        rs4805008       G       A       .       PASS    AA=A;DP=100     GT:GQ:DP        1|1:60:30       1|0:100:23      1|1:13:44
+9      14586528        rs7852534       G       T       .       PASS    AA=T;DP=127     GT:GQ:DP        1|1:60:30       1|1:35:21       1|1:100:75
+7      146552336       rs4726829       A       T       .       PASS    AA=A;DP=92      GT:GQ:DP        1|1:60:30       1|1:41:12       1|1:100:50
+21     20878468        rs13046932      A       T       .       PASS    AA=T;DP=110     GT:GQ:DP        1|1:60:30       1|1:51:21       1|1:100:60
+16     81887325        rs7202581       T       C       .       PASS    AA=C;DP=112     GT:GQ:DP        1|1:60:30       1|1:52:23       1|1:100:61
+8      115730547       rs58260164      G       T       .       PASS    AA=T;DP=109     GT:GQ:DP        1|1:60:30       1|1:53:16       1|1:100:57
+3      42620147        rs640689        G       A       .       PASS    AA=A;DP=95      GT:GQ:DP        1|1:60:30       1|1:53:17       1|1:100:48
+15     31406234        rs1980102       C       A       .       PASS    AA=C;DP=129     GT:GQ:DP        1|1:60:30       1|1:53:22       1|1:100:75
+16     31842868        rs9921760       T       G       .       PASS    AA=.;DP=165     GT:GQ:DP        1|1:60:30       1|1:53:29       1|1:100:103
+10     5108322 rs6601899       A       C       .       PASS    AA=N;DP=108     GT:GQ:DP        1|1:60:30       1|1:53:29       1|1:100:37
+11     133101332       rs10894740      G       A       .       PASS    AA=A;DP=132     GT:GQ:DP        1|1:60:30       1|1:55:23       1|1:100:80
+18     61062667        rs621082        T       C       .       PASS    AA=T;DP=98      GT:GQ:DP        1|1:60:30       1|1:58:24       1|1:100:45
+13     19944416        rs4576923       T       C       .       PASS    AA=C;DP=120     GT:GQ:DP        1|1:60:30       1|1:65:20       1|1:100:68
+18     74768435        rs7232123       A       C       .       PASS    AA=C;DP=102     GT:GQ:DP        1|1:60:30       1|1:74:23       1|1:100:50
+3      40951484        rs2371346       A       G       .       PASS    AA=A;DP=106     GT:GQ:DP        1|1:60:30       1|1:77:25       1|1:100:51
+1      206253257       rs1751583       G       A       .       PASS    AA=A;DP=115;HM2 GT:GQ:DP        1|1:60:30       1|1:77:25       1|1:100:57
+8      19137286        rs1915418       A       C       .       PASS    AA=A;DP=117     GT:GQ:DP        1|1:60:30       1|1:77:34       1|1:100:56
+2      160547587       rs2667025       C       T       .       PASS    AA=c;DP=111     GT:GQ:DP        1|1:60:30       1|1:80:26       1|1:100:56
+9      110270908       rs7041969       A       G       .       PASS    AA=G;DP=141     GT:GQ:DP        1|1:60:30       1|1:92:30       1|1:100:76
+7      45230951        rs1294855       C       T       .       PASS    AA=T;DP=114     GT:GQ:DP        1|1:60:31       1|0:75:19       1|1:100:52
+11     50420777        rs7294136       G       C       .       PASS    AA=.;DP=133     GT:GQ:DP        1|1:60:32       0|0:81:27       1|0:100:77
+1      192339460       rs643114        G       A       .       PASS    AA=A;DP=91      GT:GQ:DP        1|1:60:32       1|1:35:11       1|1:100:38
+11     43971029        rs7103509       G       T       .       PASS    AA=G;DP=118     GT:GQ:DP        1|1:60:34       1|1:43:24       1|1:100:52
+6      24136382        rs7761213       T       C       .       PASS    AA=T;DP=137     GT:GQ:DP        1|1:60:36       1|0:100:25      1|1:100:76
+10     125380947       rs1098565       A       T       .       PASS    AA=T;DP=68      GT:GQ:DP        1|1:61:19       1|1:10:8        1|1:99:36
+22     47722944        rs2318410       C       T       .       PASS    AA=A;DP=74      GT:GQ:DP        1|1:61:19       1|1:13:10       1|1:100:41
+9      131273534       rs1147366       A       G       .       PASS    AA=-;DP=79      GT:GQ:DP        1|1:61:19       1|1:13:12       1|1:100:39
+11     6813547 rs2741805       C       T       .       PASS    AA=T;DP=80      GT:GQ:DP        1|1:61:19       1|1:26:18       1|1:35:43
+X      119376009       .       A       G       .       PASS    AA=A;DP=136     GT:GQ:DP        1|1:61:22       0|0:100:38      1|0:100:44
+10     92576185        rs7906960       A       G       .       PASS    AA=G;DP=89      GT:GQ:DP        1|1:61:22       0|0:15:15       1|0:100:51
+3      173885468       rs2042033       T       C       .       PASS    AA=N;DP=101     GT:GQ:DP        1|1:61:22       0|0:24:14       1|0:100:65
+20     61546782        rs4809302       G       A       .       PASS    AA=G;DP=93      GT:GQ:DP        1|1:61:22       0|0:33:11       1|0:100:60
+11     1831022 rs57230743      G       A       .       PASS    AA=G;DP=88      GT:GQ:DP        1|1:61:22       0|0:36:14       1|0:100:42
+5      51183281        rs10940097      C       G       .       PASS    AA=c;DP=82      GT:GQ:DP        1|1:61:22       0|0:39:14       1|0:100:46
+10     101579318       rs4077146       G       A       .       PASS    AA=G;DP=99      GT:GQ:DP        1|1:61:22       0|0:42:14       1|0:100:60
+6      30323571        rs3132662       G       A       .       PASS    AA=a;DP=94      GT:GQ:DP        1|1:61:22       0|0:42:14       1|0:100:60
+4      30299033        rs6832700       C       T       .       PASS    AA=T;DP=95      GT:GQ:DP        1|1:61:22       0|0:42:15       1|0:100:57
+10     67549341        rs60175241      T       C       .       PASS    AA=T;DP=84      GT:GQ:DP        1|1:61:22       0|0:42:16       1|0:100:46
+1      240153799       rs6663588       A       T       .       PASS    AA=.;DP=122;HM2;HM3     GT:GQ:DP        1|1:61:22       0|0:44:20       1|0:100:82
+2      193651797       rs1379469       G       C       .       PASS    AA=C;DP=101     GT:GQ:DP        1|1:61:22       0|0:45:17       1|0:100:62
+3      155764134       .       G       A       .       PASS    AA=G;DP=125     GT:GQ:DP        1|1:61:22       0|0:46:23       1|0:100:82
+6      154187818       rs59858803      T       C       .       PASS    AA=T;DP=79      GT:GQ:DP        1|1:61:22       0|0:48:16       1|0:100:28
+4      187462067       .       G       A       .       PASS    AA=G;DP=108     GT:GQ:DP        1|1:61:22       0|0:48:16       1|0:100:69
+11     89544354        rs10765262      T       C       .       PASS    AA=t;DP=125     GT:GQ:DP        1|1:61:22       0|0:50:28       1|0:100:78
+2      221607820       rs6756953       C       T       .       PASS    AA=C;DP=97      GT:GQ:DP        1|1:61:22       0|0:51:18       1|0:100:48
+12     41501013        rs10785377      G       A       .       PASS    AA=G;DP=107     GT:GQ:DP        1|1:61:22       0|0:52:25       1|0:100:62
+1      185339717       .       A       G       .       PASS    AA=A;DP=119     GT:GQ:DP        1|1:61:22       0|0:54:18       1|0:100:39
+4      115638537       rs6837960       T       A       .       PASS    AA=A;DP=91      GT:GQ:DP        1|1:61:22       0|0:54:18       1|0:100:52
+13     88705924        .       A       T       .       PASS    AA=A;DP=95      GT:GQ:DP        1|1:61:22       0|0:54:18       1|0:100:55
+13     18557088        rs7333157       A       G       .       PASS    AA=a;DP=119     GT:GQ:DP        1|1:61:22       0|0:54:18       1|0:100:80
+14     97461377        rs9646139       G       A       .       PASS    AA=g;DP=130     GT:GQ:DP        1|1:61:22       0|0:54:19       1|0:100:47
+3      134184152       rs9857684       G       A       .       PASS    AA=g;DP=113     GT:GQ:DP        1|1:61:22       0|0:54:19       1|0:100:67
+8      115960802       rs10505236      T       C       .       PASS    AA=T;DP=129     GT:GQ:DP        1|1:61:22       0|0:54:19       1|0:100:80
+2      111553009       rs7578982       T       C       .       PASS    AA=T;DP=103     GT:GQ:DP        1|1:61:22       0|0:57:19       1|0:100:62
+1      231804894       rs1693230       A       G       .       PASS    AA=G;DP=115;HM2;HM3     GT:GQ:DP        1|1:61:22       0|0:57:21       1|0:100:72
+1      246425317       rs4576682       A       T       .       PASS    AA=T;DP=102;HM2 GT:GQ:DP        1|1:61:22       0|0:60:20       1|0:100:62
+2      15345889        rs9287656       C       T       .       PASS    AA=C;DP=114     GT:GQ:DP        1|1:61:22       0|0:60:21       1|0:100:70
+2      14061959        rs1518761       C       G       .       PASS    AA=G;DP=113     GT:GQ:DP        1|1:61:22       0|0:60:21       1|0:100:72
+7      7870198 rs4469370       A       T       .       PASS    AA=A;DP=128     GT:GQ:DP        1|1:61:22       0|0:61:30       1|0:100:61
+10     30281663        rs1774216       G       A       .       PASS    AA=A;DP=113     GT:GQ:DP        1|1:61:22       0|0:63:21       1|0:100:68
+20     16102086        rs6135691       T       A       .       PASS    AA=A;DP=131     GT:GQ:DP        1|1:61:22       0|0:66:22       1|0:100:86
+X      6332652 rs12391954      T       C       .       PASS    AA=c;DP=109     GT:GQ:DP        1|1:61:22       0|0:66:24       1|0:100:37
+X      128963553       rs61379569      T       C       .       PASS    AA=t;DP=131     GT:GQ:DP        1|1:61:22       0|0:69:23       1|0:100:49
+X      144828560       rs56282219      C       T       .       PASS    AA=C;DP=129     GT:GQ:DP        1|1:61:22       0|0:69:24       1|0:100:48
+6      73877239        .       T       C       .       PASS    AA=T;DP=119     GT:GQ:DP        1|1:61:22       0|0:69:24       1|0:100:75
+6      25759176        rs12528182      C       G       .       PASS    AA=C;DP=105     GT:GQ:DP        1|1:61:22       0|0:69:25       1|0:100:57
+6      28893982        .       G       A       .       PASS    AA=G;DP=116     GT:GQ:DP        1|1:61:22       0|0:69:27       1|0:100:70
+20     7208004 rs7265130       T       A       .       PASS    AA=T;DP=87      GT:GQ:DP        1|1:61:22       0|0:72:25       1|0:100:38
+5      174507169       rs2546896       T       C       .       PASS    AA=T;DP=91      GT:GQ:DP        1|1:61:22       0|0:75:25       1|0:100:34
+5      154118598       rs58415346      A       T       .       PASS    AA=T;DP=129     GT:GQ:DP        1|1:61:22       0|0:77:32       1|0:100:77
+5      163290794       rs1121026       G       A       .       PASS    AA=A;DP=104     GT:GQ:DP        1|1:61:22       0|0:78:26       1|0:100:56
+1      66815956        rs2084089       A       G       .       PASS    AA=G;DP=121     GT:GQ:DP        1|1:61:22       0|0:78:26       1|0:100:72
+2      102578840       rs6543162       C       G       .       PASS    AA=C;DP=119     GT:GQ:DP        1|1:61:22       0|0:81:27       1|0:100:74
+15     23279928        rs11161183      T       C       .       PASS    AA=T;DP=128     GT:GQ:DP        1|1:61:22       0|0:87:29       1|0:100:77
+2      137631608       rs9287466       A       G       .       PASS    AA=A;DP=124     GT:GQ:DP        1|1:61:22       0|0:87:30       1|0:100:70
+1      152745224       rs12119111      G       A       .       PASS    AA=A;DP=126     GT:GQ:DP        1|1:61:22       0|0:93:31       1|0:100:77
+21     19459503        rs2825390       G       A       .       PASS    AA=g;DP=131     GT:GQ:DP        1|1:61:22       0|0:99:34       1|0:100:36
+6      41325386        rs12195024      A       T       .       PASS    AA=a;DP=85      GT:GQ:DP        1|1:61:23       0|0:30:10       1|0:100:38
+3      73003003        .       A       T       .       PASS    AA=A;DP=92      GT:GQ:DP        1|1:61:23       0|0:34:17       1|0:100:52
+19     52838540        rs2068832       A       G       .       PASS    AA=.;DP=81      GT:GQ:DP        1|1:61:23       0|0:36:13       1|0:91:33
+22     24489643        rs133886        A       C       .       PASS    AA=A;DP=119     GT:GQ:DP        1|1:61:23       0|0:51:17       1|0:100:37
+10     52971456        rs10733839      C       T       .       PASS    AA=T;DP=100     GT:GQ:DP        1|1:61:23       0|0:51:17       1|0:100:60
+21     27912024        rs2156296       A       G       .       PASS    AA=A;DP=83      GT:GQ:DP        1|1:61:23       0|0:54:19       1|0:100:43
+11     86807548        rs7105817       G       A       .       PASS    AA=A;DP=121     GT:GQ:DP        1|1:61:23       0|0:60:20       1|0:100:77
+12     11195271        rs35326227      G       A       .       PASS    AA=A;DP=114     GT:GQ:DP        1|1:61:23       0|0:66:23       1|0:100:68
+9      113204888       rs12346691      T       C       .       PASS    AA=T;DP=105     GT:GQ:DP        1|1:61:23       0|0:69:25       1|0:100:58
+5      23275142        rs975071        A       G       .       PASS    AA=G;DP=98      GT:GQ:DP        1|1:61:23       0|0:78:26       1|0:100:49
+16     48385906        rs11076499      G       A       .       PASS    AA=G;DP=117     GT:GQ:DP        1|1:61:23       0|1:63:22       1|0:100:71
+2      199110809       rs12471527      G       A       .       PASS    AA=G;DP=149     GT:GQ:DP        1|1:61:24       0|0:100:41      1|0:100:86
+19     58631777        rs12609110      C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        1|1:61:24       0|0:25:15       1|0:100:69
+1      184473318       rs1293986       T       C       .       PASS    AA=T;DP=114     GT:GQ:DP        1|1:61:24       0|0:37:24       1|0:100:66
+20     15386981        rs1013112       T       A       .       PASS    AA=T;DP=103     GT:GQ:DP        1|1:61:24       0|0:39:28       1|0:100:53
+3      177926661       rs12632115      C       T       .       PASS    AA=C;DP=114     GT:GQ:DP        1|1:61:24       0|0:42:14       1|0:100:78
+10     85760081        rs10749476      T       C       .       PASS    AA=t;DP=118     GT:GQ:DP        1|1:61:24       1|1:22:19       1|1:100:74
+21     25874035        rs9305257       C       T       .       PASS    AA=T;DP=81      GT:GQ:DP        1|1:61:24       1|1:44:13       1|1:100:46
+4      92487199        .       A       G       .       PASS    AA=G;DP=100     GT:GQ:DP        1|1:61:25       0|0:39:15       1|0:100:59
+18     73549218        rs1704040       T       C       .       PASS    AA=T;DP=98      GT:GQ:DP        1|1:61:25       1|0:100:22      1|1:100:51
+14     40360697        rs1183457       A       G       .       PASS    AA=G;DP=77      GT:GQ:DP        1|1:61:25       1|1:47:15       1|1:69:28
+5      136815627       rs4976443       A       G       .       PASS    AA=a;DP=96      GT:GQ:DP        1|1:61:25       1|1:49:23       1|1:100:37
+2      205793690       rs6722362       G       C       .       PASS    AA=C;DP=102     GT:GQ:DP        1|1:61:25       1|1:54:21       1|1:100:55
+7      54950335        rs2110263       G       A       .       PASS    AA=A;DP=88      GT:GQ:DP        1|1:61:27       1|1:43:24       1|1:100:37
+19     5894306 rs7258475       G       T       .       PASS    AA=G;DP=116     GT:GQ:DP        1|1:61:28       0|0:51:17       1|0:100:73
+15     45400695        rs6493270       T       C       .       PASS    AA=T;DP=108     GT:GQ:DP        1|1:61:28       0|0:75:25       1|0:100:43
+20     53891390        rs1370270       A       G       .       PASS    AA=A;DP=124     GT:GQ:DP        1|1:61:28       1|1:62:21       1|1:100:77
+5      110180038       rs6890800       G       C       .       PASS    AA=C;DP=120     GT:GQ:DP        1|1:61:28       1|1:74:25       1|1:100:68
+9      1809272 rs10963450      T       G       .       PASS    AA=T;DP=110     GT:GQ:DP        1|1:61:29       0|1:100:20      1|0:100:60
+12     60245642        rs985541        T       C       .       PASS    AA=C;DP=98      GT:GQ:DP        1|1:61:29       0|1:100:22      1|0:100:48
+5      172745110       rs6880201       T       C       .       PASS    AA=t;DP=120     GT:GQ:DP        1|1:61:29       0|1:58:27       1|0:100:64
+12     99656330        rs1877882       A       G       .       PASS    AA=G;DP=108     GT:GQ:DP        1|1:61:29       0|1:69:20       1|0:100:47
+10     127462160       rs12253180      A       G       .       PASS    AA=G;DP=111     GT:GQ:DP        1|1:61:29       0|1:94:15       1|0:100:63
+6      10738419        rs6940596       T       C       .       PASS    AA=C;DP=118     GT:GQ:DP        1|1:61:30       1|1:35:28       1|1:100:60
+2      35666832        rs1595733       A       C       .       PASS    AA=a;DP=110     GT:GQ:DP        1|1:61:31       1|1:65:20       1|1:100:58
+1      211809292       rs4072954       T       C       .       PASS    AA=C;DP=133;HM2 GT:GQ:DP        1|1:61:32       1|0:100:26      1|1:100:76
+13     39584811        rs9532500       A       G       .       PASS    AA=G;DP=160     GT:GQ:DP        1|1:61:32       1|0:100:35      1|1:100:94
+9      794166  rs4742417       G       T       .       PASS    AA=g;DP=129     GT:GQ:DP        1|1:61:32       1|0:95:30       1|1:100:67
+7      33484048        rs726463        A       G       .       PASS    AA=a;DP=130     GT:GQ:DP        1|1:61:32       1|1:53:17       1|1:100:70
+12     48561404        rs836959        A       C       .       PASS    AA=A;DP=137     GT:GQ:DP        1|1:61:33       0|1:100:20      1|0:100:85
+3      89151124        rs2132581       T       C       .       PASS    AA=T;DP=141     GT:GQ:DP        1|1:61:33       0|1:42:27       1|0:100:79
+9      102257208       rs1212  T       A       .       PASS    AA=A;DP=132     GT:GQ:DP        1|1:61:33       0|1:63:18       1|0:100:83
+4      42787603        rs13101606      A       G       .       PASS    AA=G;DP=99      GT:GQ:DP        1|1:62:19       1|1:100:34      1|1:100:37
+3      149630553       rs7429872       C       T       .       PASS    AA=T;DP=101     GT:GQ:DP        1|1:62:19       1|1:100:36      1|1:100:47
+6      81955566        rs9350916       T       C       .       PASS    AA=C;DP=84      GT:GQ:DP        1|1:62:19       1|1:17:18       1|1:100:47
+4      28773079        rs2089449       T       C       .       PASS    AA=t;DP=89      GT:GQ:DP        1|1:62:19       1|1:21:10       1|1:100:60
+19     14961084        rs35033483      A       T       .       PASS    AA=a;DP=78      GT:GQ:DP        1|1:62:19       1|1:24:17       1|1:100:34
+21     40208035        rs4818100       C       T       .       PASS    AA=C;DP=103     GT:GQ:DP        1|1:62:19       1|1:24:17       1|1:100:68
+15     95175553        rs8031604       T       G       .       PASS    AA=G;DP=70      GT:GQ:DP        1|1:62:19       1|1:26:7        1|1:100:34
+6      80535502        rs6924740       G       A       .       PASS    AA=A;DP=76      GT:GQ:DP        1|1:62:19       1|1:27:18       1|1:100:39
+9      12743526        rs6474729       T       C       .       PASS    AA=C;DP=68      GT:GQ:DP        1|1:62:19       1|1:30:18       1|1:90:20
+18     26064687        rs7507066       G       A       .       PASS    AA=A;DP=88      GT:GQ:DP        1|1:62:19       1|1:32:20       1|1:100:45
+3      31905477        rs7618972       C       G       .       PASS    AA=G;DP=55      GT:GQ:DP        1|1:62:19       1|1:32:9        1|1:100:26
+3      128873708       rs813633        A       G       .       PASS    AA=a;DP=84      GT:GQ:DP        1|1:62:19       1|1:32:9        1|1:100:56
+2      184513995       rs6755058       A       G       .       PASS    AA=G;DP=71      GT:GQ:DP        1|1:62:19       1|1:35:10       1|1:100:36
+7      53857392        rs1919803       G       A       .       PASS    AA=N;DP=84      GT:GQ:DP        1|1:62:19       1|1:35:10       1|1:100:58
+9      112636294       rs4388515       A       G       .       PASS    AA=G;DP=51      GT:GQ:DP        1|1:62:19       1|1:35:10       1|1:92:19
+6      4957851 rs1771866       G       A       .       PASS    AA=A;DP=85      GT:GQ:DP        1|1:62:19       1|1:35:25       1|1:100:33
+4      163740612       rs6536678       T       C       .       PASS    AA=C;DP=80      GT:GQ:DP        1|1:62:19       1|1:38:11       1|1:100:51
+13     40858546        rs4277250       C       G       .       PASS    AA=G;DP=91      GT:GQ:DP        1|1:62:19       1|1:40:18       1|1:100:50
+4      134360804       rs7440616       T       C       .       PASS    AA=C;DP=63      GT:GQ:DP        1|1:62:19       1|1:41:12       1|1:100:23
+5      49609241        rs567248        G       A       .       PASS    AA=a;DP=64      GT:GQ:DP        1|1:62:19       1|1:41:12       1|1:100:25
+19     23776800        rs6511566       C       A       .       PASS    AA=C;DP=70      GT:GQ:DP        1|1:62:19       1|1:41:12       1|1:100:35
+13     19752161        rs9552126       C       T       .       PASS    AA=c;DP=80      GT:GQ:DP        1|1:62:19       1|1:41:12       1|1:100:49
+14     103775010       rs12880083      A       G       .       PASS    AA=G;DP=85      GT:GQ:DP        1|1:62:19       1|1:41:12       1|1:100:51
+2      81463909        rs12624247      C       T       .       PASS    AA=C;DP=71      GT:GQ:DP        1|1:62:19       1|1:41:13       1|1:100:28
+17     5727420 rs59344671      A       C       .       PASS    AA=C;DP=76      GT:GQ:DP        1|1:62:19       1|1:41:13       1|1:100:43
+11     128703557       rs10750411      G       A       .       PASS    AA=g;DP=102     GT:GQ:DP        1|1:62:19       1|1:41:13       1|1:100:70
+11     59769249        rs603648        A       T       .       PASS    AA=N;DP=91      GT:GQ:DP        1|1:62:19       1|1:41:17       1|1:100:55
+13     26491680        rs1887655       C       T       .       PASS    AA=T;DP=111     GT:GQ:DP        1|1:62:19       1|1:42:14       1|1:100:80
+13     89119397        rs9301608       C       T       .       PASS    AA=T;DP=79      GT:GQ:DP        1|1:62:19       1|1:42:17       1|1:100:31
+21     16992150        rs7278461       A       C       .       PASS    AA=C;DP=102     GT:GQ:DP        1|1:62:19       1|1:43:22       1|1:100:63
+8      141643532       rs2944754       A       G       .       PASS    AA=G;DP=73      GT:GQ:DP        1|1:62:19       1|1:44:13       1|1:100:40
+8      9533459 rs4841187       C       T       .       PASS    AA=G;DP=94      GT:GQ:DP        1|1:62:19       1|1:44:13       1|1:100:56
+7      18601259        rs801518        G       A       .       PASS    AA=A;DP=66      GT:GQ:DP        1|1:62:19       1|1:44:13       1|1:94:23
+8      145928500       rs4925838       A       G       .       PASS    AA=G;DP=73      GT:GQ:DP        1|1:62:19       1|1:44:14       1|1:100:37
+20     25608906        rs6037190       G       T       .       PASS    AA=T;DP=78      GT:GQ:DP        1|1:62:19       1|1:44:14       1|1:100:45
+16     76790204        rs741593        T       G       .       PASS    AA=G;DP=68      GT:GQ:DP        1|1:62:19       1|1:44:18       1|1:83:24
+17     28158275        rs2430985       A       C       .       PASS    AA=C;DP=88      GT:GQ:DP        1|1:62:19       1|1:44:25       1|1:90:44
+3      163851105       rs7647069       T       A       .       PASS    AA=T;DP=65      GT:GQ:DP        1|1:62:19       1|1:47:14       1|1:100:25
+8      112739707       rs1871405       A       G       .       PASS    AA=G;DP=73      GT:GQ:DP        1|1:62:19       1|1:47:14       1|1:100:40
+10     76399638        rs3213967       C       T       .       PASS    AA=T;DP=95      GT:GQ:DP        1|1:62:19       1|1:47:14       1|1:100:65
+6      11836044        rs210899        A       G       .       PASS    AA=N;DP=101     GT:GQ:DP        1|1:62:19       1|1:47:14       1|1:100:68
+17     65435673        rs180116        T       C       .       PASS    AA=t;DP=82      GT:GQ:DP        1|1:62:19       1|1:47:15       1|1:100:49
+6      72400716        rs272219        T       C       .       PASS    AA=C;DP=86      GT:GQ:DP        1|1:62:19       1|1:47:15       1|1:100:53
+X      102647902       rs1180896       C       T       .       PASS    AA=T;DP=72      GT:GQ:DP        1|1:62:19       1|1:50:15       1|1:100:25
+6      92820977        rs2503656       A       C       .       PASS    AA=C;DP=71      GT:GQ:DP        1|1:62:19       1|1:50:15       1|1:100:27
+9      18377468        rs2805928       C       T       .       PASS    AA=T;DP=81      GT:GQ:DP        1|1:62:19       1|1:50:15       1|1:100:45
+10     121895674       rs10732814      T       C       .       PASS    AA=C;DP=87      GT:GQ:DP        1|1:62:19       1|1:50:15       1|1:100:54
+9      106232021       rs1907679       C       T       .       PASS    AA=T;DP=92      GT:GQ:DP        1|1:62:19       1|1:50:15       1|1:100:54
+8      113074199       rs1460590       T       C       .       PASS    AA=t;DP=99      GT:GQ:DP        1|1:62:19       1|1:50:15       1|1:100:65
+18     1721457 rs897078        C       T       .       PASS    AA=T;DP=86      GT:GQ:DP        1|1:62:19       1|1:50:16       1|1:100:35
+13     95745035        rs9556550       A       C       .       PASS    AA=A;DP=80      GT:GQ:DP        1|1:62:19       1|1:50:16       1|1:100:45
+12     86812451        rs2126167       G       A       .       PASS    AA=A;DP=85      GT:GQ:DP        1|1:62:19       1|1:50:16       1|1:100:50
+2      33693920        rs10166099      G       C       .       PASS    AA=C;DP=85      GT:GQ:DP        1|1:62:19       1|1:50:18       1|1:100:44
+4      122408918       rs1452495       G       A       .       PASS    AA=A;DP=120     GT:GQ:DP        1|1:62:19       1|1:52:24       1|1:100:76
+3      78327923        rs1917078       G       A       .       PASS    AA=A;DP=79      GT:GQ:DP        1|1:62:19       1|1:53:16       1|1:100:32
+3      57632785        rs6793860       A       G       .       PASS    AA=G;DP=81      GT:GQ:DP        1|1:62:19       1|1:53:16       1|1:100:45
+20     11327842        rs1154723       T       C       .       PASS    AA=C;DP=82      GT:GQ:DP        1|1:62:19       1|1:53:16       1|1:100:47
+15     57149760        rs35527453      G       A       .       PASS    AA=A;DP=97      GT:GQ:DP        1|1:62:19       1|1:53:16       1|1:100:63
+9      22067543        rs1412832       C       T       .       PASS    AA=T;DP=97      GT:GQ:DP        1|1:62:19       1|1:53:16       1|1:100:63
+14     66756183        rs8004148       C       A       .       PASS    AA=g;DP=80      GT:GQ:DP        1|1:62:19       1|1:53:17       1|1:100:44
+7      85363123        rs10282248      G       A       .       PASS    AA=A;DP=92      GT:GQ:DP        1|1:62:19       1|1:56:17       1|1:100:57
+5      9256914 rs1805972       T       C       .       PASS    AA=T;DP=98      GT:GQ:DP        1|1:62:19       1|1:56:17       1|1:100:65
+7      79735481        rs306715        A       T       .       PASS    AA=T;DP=85      GT:GQ:DP        1|1:62:19       1|1:56:18       1|1:100:44
+5      127036620       rs4361571       T       C       .       PASS    AA=C;DP=90      GT:GQ:DP        1|1:62:19       1|1:56:18       1|1:100:53
+6      99908924        rs6913114       C       T       .       PASS    AA=T;DP=102     GT:GQ:DP        1|1:62:19       1|1:56:18       1|1:100:66
+15     37698644        rs10520138      T       C       .       PASS    AA=C;DP=94      GT:GQ:DP        1|1:62:19       1|1:56:20       1|1:100:56
+4      117443975       rs4833502       C       A       .       PASS    AA=A;DP=80      GT:GQ:DP        1|1:62:19       1|1:59:18       1|1:100:32
+11     101025706       rs1939453       G       A       .       PASS    AA=G;DP=89      GT:GQ:DP        1|1:62:19       1|1:59:18       1|1:100:42
+3      138491528       rs2344445       A       G       .       PASS    AA=G;DP=81      GT:GQ:DP        1|1:62:19       1|1:59:18       1|1:100:44
+7      14150119        rs10250962      G       A       .       PASS    AA=A;DP=95      GT:GQ:DP        1|1:62:19       1|1:59:18       1|1:100:56
+3      155153975       rs1533751       T       G       .       PASS    AA=C;DP=95      GT:GQ:DP        1|1:62:19       1|1:59:18       1|1:100:59
+7      70262556        rs728136        C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        1|1:62:19       1|1:59:18       1|1:100:78
+X      127091397       rs649751        T       C       .       PASS    AA=N;DP=85      GT:GQ:DP        1|1:62:19       1|1:59:19       1|1:100:34
+6      3614389 rs7739315       T       C       .       PASS    AA=N;DP=95      GT:GQ:DP        1|1:62:19       1|1:59:19       1|1:100:57
+2      52446560        rs4971810       C       G       .       PASS    AA=G;DP=97      GT:GQ:DP        1|1:62:19       1|1:59:19       1|1:100:60
+15     21597021        rs1094845       T       C       .       PASS    AA=C;DP=107     GT:GQ:DP        1|1:62:19       1|1:59:19       1|1:100:70
+10     83361287        rs11599928      G       A       .       PASS    AA=G;DP=108     GT:GQ:DP        1|1:62:19       1|1:59:20       1|1:100:66
+5      165644145       rs1918568       A       T       .       PASS    AA=T;DP=77      GT:GQ:DP        1|1:62:19       1|1:62:19       1|1:100:25
+7      85833771        rs2037881       G       A       .       PASS    AA=A;DP=75      GT:GQ:DP        1|1:62:19       1|1:62:19       1|1:100:38
+X      49584522        rs449483        T       C       .       PASS    AA=C;DP=91      GT:GQ:DP        1|1:62:19       1|1:62:19       1|1:100:44
+1      185889717       rs7541310       C       T       .       PASS    AA=T;DP=87      GT:GQ:DP        1|1:62:19       1|1:62:19       1|1:100:48
+2      76910707        rs7580043       A       T       .       PASS    AA=T;DP=93      GT:GQ:DP        1|1:62:19       1|1:62:20       1|1:100:56
+8      135939158       rs12541063      A       G       .       PASS    AA=G;DP=113     GT:GQ:DP        1|1:62:19       1|1:62:20       1|1:100:71
+13     59588085        rs9538564       C       T       .       PASS    AA=T;DP=95      GT:GQ:DP        1|1:62:19       1|1:62:26       1|1:100:54
+10     68070033        rs2394259       T       C       .       PASS    AA=T;DP=125     GT:GQ:DP        1|1:62:19       1|1:62:26       1|1:100:81
+12     79471342        rs4143624       A       C       .       PASS    AA=C;DP=120     GT:GQ:DP        1|1:62:19       1|1:64:27       1|1:100:74
+14     106186481       rs2583304       C       A       .       PASS    AA=N;DP=77      GT:GQ:DP        1|1:62:19       1|1:65:20       1|1:100:33
+4      57123024        rs11133445      C       T       .       PASS    AA=T;DP=94      GT:GQ:DP        1|1:62:19       1|1:65:20       1|1:100:55
+6      19751667        rs7743224       A       G       .       PASS    AA=A;DP=101     GT:GQ:DP        1|1:62:19       1|1:65:20       1|1:100:63
+4      186767920       rs6552895       A       T       .       PASS    AA=A;DP=90      GT:GQ:DP        1|1:62:19       1|1:65:21       1|1:100:50
+4      73606031        rs788942        A       G       .       PASS    AA=G;DP=93      GT:GQ:DP        1|1:62:19       1|1:65:21       1|1:100:52
+4      45965395        rs6825785       C       T       .       PASS    AA=C;DP=95      GT:GQ:DP        1|1:62:19       1|1:65:21       1|1:100:54
+18     26962214        rs1036523       A       G       .       PASS    AA=G;DP=87      GT:GQ:DP        1|1:62:19       1|1:65:23       1|1:100:33
+18     60680713        rs3017333       T       A       .       PASS    AA=A;DP=111     GT:GQ:DP        1|1:62:19       1|1:67:21       1|1:100:75
+1      63250164        rs4469739       G       T       .       PASS    AA=T;DP=82;HM2  GT:GQ:DP        1|1:62:19       1|1:68:21       1|1:100:30
+2      78280596        rs4594473       T       C       .       PASS    AA=C;DP=86      GT:GQ:DP        1|1:62:19       1|1:68:21       1|1:100:30
+8      35123428        rs1451355       A       G       .       PASS    AA=G;DP=82      GT:GQ:DP        1|1:62:19       1|1:68:21       1|1:100:42
+5      78999755        rs6877794       G       A       .       PASS    AA=A;DP=89      GT:GQ:DP        1|1:62:19       1|1:68:21       1|1:100:47
+5      31275151        rs4867059       G       A       .       PASS    AA=G;DP=101     GT:GQ:DP        1|1:62:19       1|1:71:22       1|1:100:48
+3      177639592       rs1384948       G       T       .       PASS    AA=T;DP=113     GT:GQ:DP        1|1:62:19       1|1:71:22       1|1:100:69
+5      29539149        rs1354575       A       G       .       PASS    AA=G;DP=90      GT:GQ:DP        1|1:62:19       1|1:71:23       1|1:100:40
+7      123734507       rs984014        C       T       .       PASS    AA=T;DP=106     GT:GQ:DP        1|1:62:19       1|1:71:23       1|1:100:45
+X      147115966       rs1362262       T       G       .       PASS    AA=G;DP=115     GT:GQ:DP        1|1:62:19       1|1:71:38       1|1:100:32
+2      69171633        rs4241348       T       G       .       PASS    AA=G;DP=101     GT:GQ:DP        1|1:62:19       1|1:72:23       1|1:100:58
+12     17989263        rs1526580       G       T       .       PASS    AA=T;DP=78      GT:GQ:DP        1|1:62:19       1|1:74:23       1|1:100:25
+11     41232528        rs4237684       A       G       .       PASS    AA=A;DP=96      GT:GQ:DP        1|1:62:19       1|1:74:23       1|1:100:54
+14     51572542        rs2645750       C       A       .       PASS    AA=A;DP=74      GT:GQ:DP        1|1:62:19       1|1:77:24       1|1:100:25
+4      74244347        rs10938069      G       T       .       PASS    AA=g;DP=89      GT:GQ:DP        1|1:62:19       1|1:77:24       1|1:100:47
+13     107578130       rs4360811       T       A       .       PASS    AA=A;DP=111     GT:GQ:DP        1|1:62:19       1|1:77:24       1|1:100:69
+1      242775527       rs3003236       T       C       .       PASS    AA=C;DP=130     GT:GQ:DP        1|1:62:19       1|1:77:24       1|1:100:85
+2      37761089        rs7589806       G       A       .       PASS    AA=A;DP=108     GT:GQ:DP        1|1:62:19       1|1:77:26       1|1:100:63
+16     31570207        rs62052398      G       A       .       PASS    AA=G;DP=79      GT:GQ:DP        1|1:62:19       1|1:80:25       1|1:100:28
+X      92405432        rs5940080       A       C       .       PASS    AA=A;DP=98      GT:GQ:DP        1|1:62:19       1|1:80:25       1|1:100:32
+5      74412757        rs7717337       T       C       .       PASS    AA=C;DP=86      GT:GQ:DP        1|1:62:19       1|1:80:25       1|1:100:36
+2      39031997        rs441869        G       C       .       PASS    AA=C;DP=106     GT:GQ:DP        1|1:62:19       1|1:80:25       1|1:100:62
+4      103488022       rs2054393       C       T       .       PASS    AA=T;DP=114     GT:GQ:DP        1|1:62:19       1|1:80:25       1|1:100:73
+8      52633841        rs4463410       C       T       .       PASS    AA=T;DP=101     GT:GQ:DP        1|1:62:19       1|1:80:27       1|1:100:43
+9      119824517       rs2806070       G       A       .       PASS    AA=G;DP=112     GT:GQ:DP        1|1:62:19       1|1:83:29       1|1:100:61
+1      196244904       rs6676699       G       T       .       PASS    AA=G;DP=103     GT:GQ:DP        1|1:62:19       1|1:86:27       1|1:100:56
+9      109501450       rs6477588       C       G       .       PASS    AA=G;DP=107     GT:GQ:DP        1|1:62:19       1|1:89:28       1|1:100:60
+10     20438674        rs2460593       G       A       .       PASS    AA=A;DP=96      GT:GQ:DP        1|1:62:19       1|1:92:29       1|1:100:50
+2      118066833       rs4849583       C       T       .       PASS    AA=c;DP=107     GT:GQ:DP        1|1:62:19       1|1:92:29       1|1:100:57
+6      96208633        rs9375169       C       T       .       PASS    AA=T;DP=105     GT:GQ:DP        1|1:62:19       1|1:92:29       1|1:100:59
+3      29653778        rs1457640       G       A       .       PASS    AA=A;DP=110     GT:GQ:DP        1|1:62:19       1|1:92:31       1|1:100:62
+6      103442976       rs6918215       G       A       .       PASS    AA=A;DP=119     GT:GQ:DP        1|1:62:19       1|1:95:31       1|1:100:33
+8      112996257       rs320539        C       A       .       PASS    AA=C;DP=119     GT:GQ:DP        1|1:62:19       1|1:98:31       1|1:100:65
+3      54385853        rs6445650       T       G       .       PASS    AA=G;DP=145     GT:GQ:DP        1|1:62:19       1|1:98:32       1|1:100:96
+2      118020748       rs4849567       A       C       .       PASS    AA=C;DP=85      GT:GQ:DP        1|1:62:20       1|1:24:17       1|1:99:25
+14     68688926        rs1275419       A       C       .       PASS    AA=C;DP=70      GT:GQ:DP        1|1:62:20       1|1:26:7        1|1:100:43
+1      113567115       rs1536021       G       T       .       PASS    AA=T;DP=80;HM2  GT:GQ:DP        1|1:62:20       1|1:30:17       1|1:100:43
+9      105288603       rs10820431      C       T       .       PASS    AA=T;DP=108     GT:GQ:DP        1|1:62:20       1|1:31:25       1|1:100:63
+5      18698759        rs4455559       A       G       .       PASS    AA=A;DP=72      GT:GQ:DP        1|1:62:20       1|1:32:10       1|1:100:42
+13     42573456        rs2762161       T       C       .       PASS    AA=C;DP=67      GT:GQ:DP        1|1:62:20       1|1:35:11       1|1:100:25
+3      163968832       rs9683328       C       T       .       PASS    AA=T;DP=81      GT:GQ:DP        1|1:62:20       1|1:38:12       1|1:100:35
+8      16454417        rs1474449       C       T       .       PASS    AA=T;DP=96      GT:GQ:DP        1|1:62:20       1|1:38:14       1|1:100:63
+4      102442107       rs1031035       T       C       .       PASS    AA=C;DP=73      GT:GQ:DP        1|1:62:20       1|1:41:12       1|1:100:36
+9      82811116        rs1352647       C       T       .       PASS    AA=c;DP=79      GT:GQ:DP        1|1:62:20       1|1:41:12       1|1:100:42
+9      29933594        rs2492627       G       A       .       PASS    AA=g;DP=86      GT:GQ:DP        1|1:62:20       1|1:41:12       1|1:100:51
+6      152823999       rs508931        A       G       .       PASS    AA=G;DP=88      GT:GQ:DP        1|1:62:20       1|1:44:13       1|1:100:56
+9      20879406        rs7868100       G       A       .       PASS    AA=G;DP=98      GT:GQ:DP        1|1:62:20       1|1:44:13       1|1:100:64
+8      100407624       rs3110396       A       G       .       PASS    AA=G;DP=109     GT:GQ:DP        1|1:62:20       1|1:44:13       1|1:100:76
+18     4379394 rs723073        T       C       .       PASS    AA=T;DP=91      GT:GQ:DP        1|1:62:20       1|1:44:16       1|1:100:52
+3      195389254       rs2368043       G       A       .       PASS    AA=A;DP=107     GT:GQ:DP        1|1:62:20       1|1:53:16       1|1:100:71
+3      155406108       rs450115        A       C       .       PASS    AA=N;DP=97      GT:GQ:DP        1|1:62:20       1|1:55:24       1|1:100:52
+12     85656259        rs11104061      T       C       .       PASS    AA=T;DP=74      GT:GQ:DP        1|1:62:20       1|1:62:19       1|1:100:26
+2      51545354        rs983650        G       C       .       PASS    AA=C;DP=80      GT:GQ:DP        1|1:62:20       1|1:62:19       1|1:100:41
+1      89640672        rs6428535       C       T       .       PASS    AA=c;DP=114;HM2 GT:GQ:DP        1|1:62:20       1|1:64:27       1|1:100:64
+16     64916765        rs4477705       A       G       .       PASS    AA=G;DP=116     GT:GQ:DP        1|1:62:20       1|1:65:20       1|1:100:76
+5      131915441       rs2522408       G       C       .       PASS    AA=C;DP=93      GT:GQ:DP        1|1:62:20       1|1:65:21       1|1:100:52
+2      56980246        rs12465022      G       A       .       PASS    AA=G;DP=90      GT:GQ:DP        1|1:62:20       1|1:66:22       1|1:100:51
+7      16309709        rs2214625       A       T       .       PASS    AA=T;DP=88      GT:GQ:DP        1|1:62:20       1|1:68:21       1|1:100:48
+10     88298364        rs2803573       G       T       .       PASS    AA=G;DP=110     GT:GQ:DP        1|1:62:20       1|1:68:21       1|1:100:70
+8      51818669        rs7846699       A       G       .       PASS    AA=G;DP=88      GT:GQ:DP        1|1:62:20       1|1:71:22       1|1:100:47
+3      35097094        rs1600246       G       A       .       PASS    AA=A;DP=88      GT:GQ:DP        1|1:62:20       1|1:71:24       1|1:100:34
+3      29306863        rs1025644       C       T       .       PASS    AA=N;DP=98      GT:GQ:DP        1|1:62:20       1|1:74:24       1|1:100:52
+5      13412395        rs9312822       C       T       .       PASS    AA=T;DP=111     GT:GQ:DP        1|1:62:20       1|1:74:24       1|1:100:70
+6      105665735       rs11156435      C       T       .       PASS    AA=T;DP=107     GT:GQ:DP        1|1:62:20       1|1:74:24       1|1:100:71
+7      77607189        rs3807708       T       A       .       PASS    AA=A;DP=116     GT:GQ:DP        1|1:62:20       1|1:77:24       1|1:100:71
+2      140310608       rs1464300       C       T       .       PASS    AA=T;DP=109     GT:GQ:DP        1|1:62:20       1|1:80:25       1|1:100:67
+8      59914548        rs13281543      A       G       .       PASS    AA=A;DP=106     GT:GQ:DP        1|1:62:20       1|1:83:26       1|1:100:60
+3      5907629 rs892821        G       C       .       PASS    AA=C;DP=118     GT:GQ:DP        1|1:62:20       1|1:86:29       1|1:100:67
+9      116918155       rs1250022       T       A       .       PASS    AA=A;DP=121     GT:GQ:DP        1|1:62:20       1|1:89:28       1|1:100:73
+8      5543310 rs2733001       A       C       .       PASS    AA=C;DP=123     GT:GQ:DP        1|1:62:20       1|1:92:29       1|1:100:62
+3      19416130        rs1348232       G       A       .       PASS    AA=G;DP=123     GT:GQ:DP        1|1:62:21       1|1:100:39      1|1:100:63
+19     12035866        rs7249543       T       C       .       PASS    AA=C;DP=73      GT:GQ:DP        1|1:62:21       1|1:21:14       1|1:62:27
+17     69974616        rs2670827       C       T       .       PASS    AA=N;DP=122     GT:GQ:DP        1|1:62:21       1|1:41:13       1|1:100:82
+5      112895037       rs4438867       T       G       .       PASS    AA=G;DP=97      GT:GQ:DP        1|1:62:21       1|1:43:18       1|1:100:56
+8      26817711        rs4146846       T       C       .       PASS    AA=C;DP=106     GT:GQ:DP        1|1:62:21       1|1:50:15       1|1:100:68
+12     101855642       rs61943182      A       G       .       PASS    AA=a;DP=92      GT:GQ:DP        1|1:62:21       1|1:56:18       1|1:100:53
+11     115695252       rs12361498      G       A       .       PASS    AA=A;DP=95      GT:GQ:DP        1|1:62:21       1|1:56:20       1|1:100:55
+7      109202728       rs3114821       C       A       .       PASS    AA=A;DP=102     GT:GQ:DP        1|1:62:21       1|1:58:29       1|1:100:50
+11     10058739        rs10743128      A       G       .       PASS    AA=G;DP=111     GT:GQ:DP        1|1:62:21       1|1:62:20       1|1:100:71
+11     1937366 rs217234        G       A       .       PASS    AA=A;DP=111     GT:GQ:DP        1|1:62:21       1|1:65:20       1|1:100:67
+5      4317533 rs459528        A       G       .       PASS    AA=A;DP=115     GT:GQ:DP        1|1:62:21       1|1:74:23       1|1:100:71
+3      23476000        rs778476        T       C       .       PASS    AA=C;DP=113     GT:GQ:DP        1|1:62:22       1|1:68:21       1|1:100:69
+3      198011176       rs9843906       G       C       .       PASS    AA=C;DP=121     GT:GQ:DP        1|1:62:22       1|1:83:30       1|1:100:69
+14     69953771        rs4902816       T       A       .       PASS    AA=T;DP=90      GT:GQ:DP        1|1:62:23       1|1:24:22       1|1:24:43
+1      2937279 .       G       A       .       PASS    AA=G;DP=71      GT:GQ:DP        1|1:62:24       0|0:5:10        1|0:100:37
+3      137895270       rs12330725      A       T       .       PASS    AA=T;DP=86      GT:GQ:DP        1|1:62:24       0|1:35:15       1|0:100:39
+4      4741835 rs7673538       A       G       .       PASS    AA=a;DP=93      GT:GQ:DP        1|1:62:24       0|1:5:16        1|0:100:51
+13     71576162        rs9529960       A       G       .       PASS    AA=G;DP=108     GT:GQ:DP        1|1:62:24       0|1:66:21       1|0:100:64
+19     38394943        rs11669156      C       T       .       PASS    AA=T;DP=73      GT:GQ:DP        1|1:62:24       0|1:66:8        1|0:100:33
+3      89856194        rs6551421       T       C       .       PASS    AA=C;DP=79      GT:GQ:DP        1|1:62:25       0|0:54:19       1|0:100:25
+19     61420417        rs7250818       G       A       .       PASS    AA=g;DP=107     GT:GQ:DP        1|1:62:25       1|0:56:18       1|1:100:53
+18     33255126        rs1786823       T       C       .       PASS    AA=C;DP=100     GT:GQ:DP        1|1:62:25       1|1:47:14       1|1:100:56
+2      72616152        rs10865391      G       A       .       PASS    AA=A;DP=102     GT:GQ:DP        1|1:62:25       1|1:62:19       1|1:100:47
+5      100888178       rs350556        A       G       .       PASS    AA=A;DP=105     GT:GQ:DP        1|1:62:25       1|1:65:22       1|1:100:58
+1      214379831       rs448588        G       A       .       PASS    AA=g;DP=104;HM2;HM3     GT:GQ:DP        1|1:62:25       1|1:74:23       1|1:100:56
+13     30605475        rs4381465       T       A       .       PASS    AA=A;DP=87      GT:GQ:DP        1|1:62:26       1|1:10:17       1|1:92:33
+2      24422854        rs2551139       A       T       .       PASS    AA=T;DP=114     GT:GQ:DP        1|1:62:26       1|1:11:13       1|1:100:73
+8      58922602        rs6471656       G       A       .       PASS    AA=A;DP=78      GT:GQ:DP        1|1:62:26       1|1:44:13       1|1:100:26
+18     34531771        rs4143923       T       A       .       PASS    AA=A;DP=127     GT:GQ:DP        1|1:62:26       1|1:53:16       1|1:100:78
+13     54851712        rs3105083       T       A       .       PASS    AA=A;DP=87      GT:GQ:DP        1|1:62:26       1|1:56:18       1|1:100:34
+3      141575189       rs10804672      C       T       .       PASS    AA=C;DP=108     GT:GQ:DP        1|1:62:26       1|1:77:24       1|1:100:57
+2      174282312       rs7572805       A       G       .       PASS    AA=G;DP=107     GT:GQ:DP        1|1:62:26       1|1:86:27       1|1:100:54
+5      25359464        rs11958933      G       A       .       PASS    AA=A;DP=91      GT:GQ:DP        1|1:62:27       1|0:32:19       1|1:64:43
+11     42661907        rs4478974       T       G       .       PASS    AA=T;DP=117     GT:GQ:DP        1|1:62:27       1|1:67:27       1|1:100:62
+15     65443703        rs7162838       G       C       .       PASS    AA=C;DP=93      GT:GQ:DP        1|1:62:27       1|1:68:21       1|1:100:44
+12     121810812       rs2649903       A       G       .       PASS    AA=G;DP=144     GT:GQ:DP        1|1:62:27       1|1:68:21       1|1:100:53
+19     36947278        rs277422        G       A       .       PASS    AA=G;DP=126     GT:GQ:DP        1|1:62:27       1|1:95:31       1|1:100:70
+12     42884421        rs28838075      A       T       .       PASS    AA=A;DP=119     GT:GQ:DP        1|1:62:28       1|0:100:16      1|1:100:75
+8      141424378       rs6992777       C       G       .       PASS    AA=G;DP=135     GT:GQ:DP        1|1:62:28       1|0:76:22       1|1:100:87
+2      151535703       rs1586259       C       T       .       PASS    AA=C;DP=136     GT:GQ:DP        1|1:62:28       1|1:60:26       1|1:100:81
+10     129833276       rs12257487      A       G       .       PASS    AA=a;DP=106     GT:GQ:DP        1|1:62:29       1|0:100:14      1|1:100:59
+2      83548442        rs967016        C       A       .       PASS    AA=A;DP=145     GT:GQ:DP        1|1:62:29       1|0:100:29      1|1:100:88
+3      14355778        rs13091718      T       C       .       PASS    AA=N;DP=130     GT:GQ:DP        1|1:62:30       0|0:42:25       1|0:100:75
+4      7528112 rs13135262      T       C       .       PASS    AA=C;DP=104     GT:GQ:DP        1|1:62:30       0|0:45:18       1|0:100:46
+11     102987211       rs2008961       T       C       .       PASS    AA=C;DP=119     GT:GQ:DP        1|1:62:30       0|0:49:23       1|0:100:63
+6      20598369        rs4134981       T       G       .       PASS    AA=T;DP=144     GT:GQ:DP        1|1:62:30       0|0:72:24       1|0:100:48
+5      138322243       rs10054796      G       A       .       PASS    AA=A;DP=107     GT:GQ:DP        1|1:62:30       0|1:28:14       1|0:100:58
+11     27133106        .       A       G       .       PASS    AA=A;DP=114     GT:GQ:DP        1|1:62:30       0|1:96:27       1|0:100:58
+4      28282734        rs1493150       C       A       .       PASS    AA=A;DP=105     GT:GQ:DP        1|1:62:33       0|0:33:22       1|0:100:48
+4      104462439       rs6836157       A       G       .       PASS    AA=N;DP=115     GT:GQ:DP        1|1:62:34       0|0:33:12       1|0:100:69
+5      72862778        rs10036285      C       T       .       PASS    AA=T;DP=130     GT:GQ:DP        1|1:62:34       0|0:60:20       1|0:100:78
+7      25256950        rs1024468       A       C       .       PASS    AA=A;DP=136     GT:GQ:DP        1|1:62:34       0|0:69:23       1|0:100:84
+3      19819658        rs1605195       A       C       .       PASS    AA=A;DP=154     GT:GQ:DP        1|1:62:34       0|0:87:30       1|0:100:89
+1      2455652 rs3001339       C       T       .       PASS    AA=T;DP=110;HM3 GT:GQ:DP        1|1:62:35       1|0:100:14      1|1:85:61
+16     985952  rs593969        C       T       .       PASS    AA=T;DP=147     GT:GQ:DP        1|1:62:38       0|0:75:27       1|0:100:81
+8      6919946 rs7819598       A       C       .       PASS    AA=.;DP=118     GT:GQ:DP        1|1:62:39       1|1:20:21       1|1:80:45
+4      44595001        rs7666478       C       T       .       PASS    AA=T;DP=69      GT:GQ:DP        1|1:63:20       1|1:7:10        1|1:88:28
+9      11371824        rs1414217       C       A       .       PASS    AA=A;DP=82      GT:GQ:DP        1|1:63:21       1|0:100:16      1|1:100:46
+2      199038067       rs58758966      T       C       .       PASS    AA=T;DP=100     GT:GQ:DP        1|1:63:21       1|0:100:18      1|1:100:61
+12     71260920        rs11179261      C       A       .       PASS    AA=A;DP=71      GT:GQ:DP        1|1:63:21       1|0:100:18      1|1:81:27
+12     121968621       rs61275253      T       C       .       PASS    AA=C;DP=95      GT:GQ:DP        1|1:63:21       1|0:100:19      1|1:100:55
+6      50693358        rs579246        T       G       .       PASS    AA=G;DP=75      GT:GQ:DP        1|1:63:21       1|0:100:19      1|1:90:30
+20     34190780        rs6058413       G       A       .       PASS    AA=G;DP=87      GT:GQ:DP        1|1:63:21       1|0:100:20      1|1:100:40
+11     106036081       rs1791593       C       T       .       PASS    AA=T;DP=130     GT:GQ:DP        1|1:63:21       1|0:100:23      1|1:100:84
+13     107016497       rs7990497       C       T       .       PASS    AA=T;DP=87      GT:GQ:DP        1|1:63:21       1|0:100:23      1|1:91:43
+16     11541931        rs62022842      C       G       .       PASS    AA=C;DP=91      GT:GQ:DP        1|1:63:21       1|0:100:23      1|1:99:33
+4      110183846       rs2344869       C       T       .       PASS    AA=T;DP=107     GT:GQ:DP        1|1:63:21       1|0:100:24      1|1:100:61
+10     81779331        rs12267474      T       C       .       PASS    AA=N;DP=101     GT:GQ:DP        1|1:63:21       1|0:100:25      1|1:100:47
+9      32012207        rs407791        G       A       .       PASS    AA=A;DP=112     GT:GQ:DP        1|1:63:21       1|0:100:25      1|1:93:44
+1      98551075        rs1075033       A       G       .       PASS    AA=G;DP=128;HM2;HM3     GT:GQ:DP        1|1:63:21       1|0:100:26      1|1:100:81
+18     70628817        rs9646578       T       C       .       PASS    AA=T;DP=95      GT:GQ:DP        1|1:63:21       1|0:100:26      1|1:81:47
+18     36300753        rs11661783      G       A       .       PASS    AA=A;DP=91      GT:GQ:DP        1|1:63:21       1|0:100:27      1|1:96:32
+2      51518891        rs13404762      T       C       .       PASS    AA=C;DP=104     GT:GQ:DP        1|1:63:21       1|0:100:28      1|1:100:54
+4      98020885        rs28594762      A       C       .       PASS    AA=C;DP=101     GT:GQ:DP        1|1:63:21       1|0:100:28      1|1:61:50
+11     41509560        rs7111325       T       C       .       PASS    AA=C;DP=125     GT:GQ:DP        1|1:63:21       1|0:100:31      1|1:100:75
+3      21533109        rs7642500       T       C       .       PASS    AA=C;DP=87      GT:GQ:DP        1|1:63:21       1|0:57:19       1|1:100:46
+X      144283490       rs1937089       A       T       .       PASS    AA=A;DP=116     GT:GQ:DP        1|1:63:21       1|0:66:13       1|1:100:48
+5      76393836        rs61456533      C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        1|1:63:21       1|0:68:19       1|1:100:69
+10     4707029 rs2123352       C       G       .       PASS    AA=G;DP=90      GT:GQ:DP        1|1:63:21       1|0:68:23       1|1:87:44
+8      75287170        rs7841382       C       T       .       PASS    AA=C;DP=103     GT:GQ:DP        1|1:63:21       1|0:75:20       1|1:100:63
+20     17996084        rs6045177       T       C       .       PASS    AA=C;DP=76      GT:GQ:DP        1|1:63:21       1|0:77:12       1|1:77:33
+7      117839279       rs11981238      A       G       .       PASS    AA=A;DP=98      GT:GQ:DP        1|1:63:21       1|0:80:17       1|1:100:61
+13     25777983        rs793125        T       C       .       PASS    AA=T;DP=104     GT:GQ:DP        1|1:63:21       1|0:97:17       1|1:100:68
+17     67142957        rs7226109       T       C       .       PASS    AA=C;DP=83      GT:GQ:DP        1|1:63:22       0|1:100:13      1|0:100:36
+4      159408325       rs56679195      G       A       .       PASS    AA=G;DP=81      GT:GQ:DP        1|1:63:22       0|1:100:14      1|0:100:46
+4      125778013       rs9307543       A       G       .       PASS    AA=G;DP=85      GT:GQ:DP        1|1:63:22       0|1:100:15      1|0:100:46
+18     34167236        rs7226540       T       A       .       PASS    AA=A;DP=102     GT:GQ:DP        1|1:63:22       0|1:100:18      1|0:100:61
+14     36558759        rs9806037       A       G       .       PASS    AA=G;DP=102     GT:GQ:DP        1|1:63:22       0|1:100:19      1|0:100:66
+6      141022263       rs2039609       A       G       .       PASS    AA=A;DP=100     GT:GQ:DP        1|1:63:22       0|1:100:20      1|0:100:56
+5      120815264       rs10793803      T       C       .       PASS    AA=T;DP=101     GT:GQ:DP        1|1:63:22       0|1:100:20      1|0:100:58
+5      25940312        rs1428664       G       T       .       PASS    AA=T;DP=105     GT:GQ:DP        1|1:63:22       0|1:100:20      1|0:100:64
+11     100198444       rs678681        T       C       .       PASS    AA=C;DP=94      GT:GQ:DP        1|1:63:22       0|1:100:21      1|0:100:53
+15     36818375        rs2958290       A       G       .       PASS    AA=G;DP=100     GT:GQ:DP        1|1:63:22       0|1:100:21      1|0:100:57
+10     129569070       rs11018385      G       C       .       PASS    AA=C;DP=126     GT:GQ:DP        1|1:63:22       0|1:100:21      1|0:100:83
+3      178734750       rs9868973       G       A       .       PASS    AA=A;DP=125     GT:GQ:DP        1|1:63:22       0|1:100:21      1|0:100:84
+5      28392574        rs10066215      C       T       .       PASS    AA=T;DP=96      GT:GQ:DP        1|1:63:22       0|1:100:22      1|0:100:50
+5      52546979        rs6875198       G       T       .       PASS    AA=T;DP=125     GT:GQ:DP        1|1:63:22       0|1:100:22      1|0:100:81
+2      204167451       rs4675350       C       T       .       PASS    AA=T;DP=144     GT:GQ:DP        1|1:63:22       0|1:100:22      1|0:100:89
+20     44925248        rs12481009      C       T       .       PASS    AA=C;DP=109     GT:GQ:DP        1|1:63:22       0|1:100:23      1|0:100:67
+3      188530230       .       G       A       .       PASS    AA=G;DP=102     GT:GQ:DP        1|1:63:22       0|1:100:24      1|0:100:57
+5      156658511       rs10068345      C       T       .       PASS    AA=T;DP=117     GT:GQ:DP        1|1:63:22       0|1:100:24      1|0:100:73
+12     84669775        rs10863070      G       A       .       PASS    AA=G;DP=97      GT:GQ:DP        1|1:63:22       0|1:100:27      1|0:100:48
+4      172703424       .       A       G       .       PASS    AA=A;DP=107     GT:GQ:DP        1|1:63:22       0|1:100:27      1|0:100:60
+22     16279634        rs5992688       C       T       .       PASS    AA=C;DP=133     GT:GQ:DP        1|1:63:22       0|1:100:28      1|0:100:83
+9      26443723        rs6475897       G       A       .       PASS    AA=A;DP=141     GT:GQ:DP        1|1:63:22       0|1:100:31      1|0:100:89
+17     10573560        rs399236        T       C       .       PASS    AA=T;DP=98      GT:GQ:DP        1|1:63:22       0|1:17:16       1|0:100:60
+9      21048470        rs1539740       A       G       .       PASS    AA=A;DP=105     GT:GQ:DP        1|1:63:22       0|1:31:22       1|0:100:61
+14     45428041        rs435150        A       G       .       PASS    AA=N;DP=89      GT:GQ:DP        1|1:63:22       0|1:40:15       1|0:100:45
+20     44328377        rs2425815       G       A       .       PASS    AA=A;DP=98      GT:GQ:DP        1|1:63:22       0|1:48:21       1|0:100:55
+X      4173531 rs5916561       G       A       .       PASS    AA=.;DP=104     GT:GQ:DP        1|1:63:22       0|1:54:17       1|0:100:42
+14     36588637        rs7141528       T       C       .       PASS    AA=C;DP=89      GT:GQ:DP        1|1:63:22       0|1:59:20       1|0:100:47
+3      39771635        rs6788320       T       G       .       PASS    AA=G;DP=98      GT:GQ:DP        1|1:63:22       0|1:64:11       1|0:100:62
+17     63980995        rs2952286       T       G       .       PASS    AA=G;DP=96      GT:GQ:DP        1|1:63:22       0|1:66:24       1|0:100:44
+9      18422392        rs10756961      T       C       .       PASS    AA=T;DP=85      GT:GQ:DP        1|1:63:22       0|1:68:13       1|0:100:50
+5      274277  rs58378472      C       A       .       PASS    AA=c;DP=78      GT:GQ:DP        1|1:63:22       0|1:69:15       1|0:100:32
+1      64126174        rs855848        G       A       .       PASS    AA=A;DP=129;HM2 GT:GQ:DP        1|1:63:22       0|1:70:27       1|0:100:80
+1      244998298       rs4926452       T       G       .       PASS    AA=G;DP=116;HM2 GT:GQ:DP        1|1:63:22       0|1:76:19       1|0:100:76
+16     3433289 rs34496784      T       C       .       PASS    AA=C;DP=86      GT:GQ:DP        1|1:63:22       0|1:79:12       1|0:100:52
+11     96205898        rs1377310       A       G       .       PASS    AA=T;DP=89      GT:GQ:DP        1|1:63:22       0|1:87:15       1|0:100:51
+12     15962387        rs7299985       T       G       .       PASS    AA=G;DP=101     GT:GQ:DP        1|1:63:22       0|1:92:15       1|0:100:66
+10     19345485        rs1361294       A       G       .       PASS    AA=G;DP=101     GT:GQ:DP        1|1:63:22       1|0:100:16      1|1:100:62
+19     44874033        rs16973572      A       C       .       PASS    AA=C;DP=88      GT:GQ:DP        1|1:63:22       1|0:100:20      1|1:100:41
+2      142809941       rs4563160       T       C       .       PASS    AA=C;DP=112     GT:GQ:DP        1|1:63:22       1|0:100:20      1|1:100:69
+12     66046499        rs12302564      T       C       .       PASS    AA=T;DP=110     GT:GQ:DP        1|1:63:22       1|0:100:24      1|1:100:64
+12     12082975        rs10845454      A       T       .       PASS    AA=T;DP=116     GT:GQ:DP        1|1:63:22       1|0:100:26      1|1:100:69
+19     63785948        rs8106379       A       G       .       PASS    AA=.;DP=137     GT:GQ:DP        1|1:63:22       1|0:100:28      1|1:100:89
+3      13609108        rs1901129       C       G       .       PASS    AA=C;DP=122     GT:GQ:DP        1|1:63:22       1|0:100:33      1|1:100:67
+3      31136798        rs6798325       T       C       .       PASS    AA=t;DP=81      GT:GQ:DP        1|1:63:22       1|0:64:16       1|1:87:29
+10     52892524        rs293294        G       C       .       PASS    AA=C;DP=106     GT:GQ:DP        1|1:63:22       1|0:72:21       1|1:100:62
+8      6069687 rs6993439       A       T       .       PASS    AA=T;DP=101     GT:GQ:DP        1|1:63:22       1|0:78:17       1|1:100:63
+1      159224510       rs2483148       A       C       .       PASS    AA=a;DP=82      GT:GQ:DP        1|1:63:22       1|0:79:19       1|1:61:32
+10     21173592        rs4408230       G       A       .       PASS    AA=A;DP=79      GT:GQ:DP        1|1:63:22       1|0:89:14       1|1:63:37
+1      22000579        rs7518006       G       A       .       PASS    AA=A;DP=83;HM2  GT:GQ:DP        1|1:63:22       1|0:94:24       1|1:72:25
+7      144750995       rs850326        G       T       .       PASS    AA=T;DP=92      GT:GQ:DP        1|1:63:23       0|1:100:22      1|0:100:45
+6      115746754       rs6940934       T       C       .       PASS    AA=C;DP=115     GT:GQ:DP        1|1:63:23       0|1:100:23      1|0:100:69
+2      172871930       rs4447582       T       C       .       PASS    AA=C;DP=135     GT:GQ:DP        1|1:63:23       0|1:100:25      1|0:100:88
+4      80450788        rs1994191       C       T       .       PASS    AA=C;DP=117     GT:GQ:DP        1|1:63:23       0|1:100:26      1|0:100:66
+13     32446132        rs449654        G       A       .       PASS    AA=A;DP=112     GT:GQ:DP        1|1:63:23       0|1:100:29      1|0:100:47
+16     87207692        rs13330572      C       A       .       PASS    AA=C;DP=109     GT:GQ:DP        1|1:63:23       0|1:100:31      1|0:100:55
+3      41502829        rs9865608       T       C       .       PASS    AA=T;DP=139     GT:GQ:DP        1|1:63:23       0|1:100:34      1|0:100:79
+7      39615800        rs4723884       G       A       .       PASS    AA=g;DP=77      GT:GQ:DP        1|1:63:23       0|1:15:5        1|0:100:48
+20     1448404 rs2422597       G       A       .       PASS    AA=A;DP=127     GT:GQ:DP        1|1:63:23       0|1:55:20       1|0:100:86
+18     8614151 rs321655        A       G       .       PASS    AA=G;DP=111     GT:GQ:DP        1|1:63:23       0|1:60:16       1|0:100:70
+15     31881759        rs1864335       T       A       .       PASS    AA=A;DP=118     GT:GQ:DP        1|1:63:23       0|1:66:21       1|0:100:73
+20     4561113 rs6037903       A       G       .       PASS    AA=G;DP=120     GT:GQ:DP        1|1:63:23       0|1:66:24       1|0:100:75
+2      113639745       rs6542121       A       G       .       PASS    AA=A;DP=119     GT:GQ:DP        1|1:63:23       0|1:79:36       1|0:100:60
+8      34585812        rs7838451       C       T       .       PASS    AA=C;DP=100     GT:GQ:DP        1|1:63:23       0|1:92:23       1|0:100:54
+18     52519099        rs57230898      G       A       .       PASS    AA=G;DP=92      GT:GQ:DP        1|1:63:23       0|1:93:13       1|0:100:54
+8      69594265        rs2380472       G       A       .       PASS    AA=A;DP=91      GT:GQ:DP        1|1:63:23       0|1:97:21       1|0:100:48
+8      6023092 rs966740        G       T       .       PASS    AA=G;DP=97      GT:GQ:DP        1|1:63:23       0|1:98:20       1|0:100:55
+21     43304617        rs234691        C       T       .       PASS    AA=C;DP=102     GT:GQ:DP        1|1:63:23       0|1:99:18       1|0:100:60
+11     103028773       rs10750669      A       G       .       PASS    AA=A;DP=80      GT:GQ:DP        1|1:63:23       1|0:100:19      1|1:93:31
+6      87307913        rs952571        A       G       .       PASS    AA=a;DP=111     GT:GQ:DP        1|1:63:23       1|0:100:26      1|1:100:61
+10     38432399        rs2504127       C       G       .       PASS    AA=G;DP=97      GT:GQ:DP        1|1:63:23       1|0:88:17       1|1:100:53
+11     128967443       rs745382        A       G       .       PASS    AA=G;DP=121     GT:GQ:DP        1|1:63:23       1|1:32:20       1|1:100:75
+7      107858191       rs7792321       G       C       .       PASS    AA=G;DP=108     GT:GQ:DP        1|1:63:24       0|1:100:26      1|0:100:58
+2      63895597        rs6726257       G       A       .       PASS    AA=A;DP=107     GT:GQ:DP        1|1:63:24       0|1:100:28      1|0:100:52
+14     53997400        rs7150062       A       G       .       PASS    AA=a;DP=120     GT:GQ:DP        1|1:63:24       0|1:27:17       1|0:97:33
+10     123082797       rs4752536       A       G       .       PASS    AA=G;DP=125     GT:GQ:DP        1|1:63:24       0|1:98:16       1|0:100:87
+4      8637639 rs7696507       C       T       .       PASS    AA=T;DP=126     GT:GQ:DP        1|1:63:24       1|1:50:15       1|1:100:47
+3      84573718        rs4505713       C       T       .       PASS    AA=C;DP=91      GT:GQ:DP        1|1:63:25       1|1:39:15       1|1:100:42
+1      52096816        rs2842576       C       T       .       PASS    AA=T;DP=99;HM2;HM3      GT:GQ:DP        1|1:63:25       1|1:44:13       1|1:100:62
+6      168207733       rs9364391       C       T       .       PASS    AA=C;DP=83      GT:GQ:DP        1|1:63:25       1|1:60:20       1|1:100:33
+6      30023101        rs2571386       T       C       .       PASS    AA=.;DP=129     GT:GQ:DP        1|1:63:25       1|1:89:28       1|1:100:73
+2      38474960        rs11674467      T       C       .       PASS    AA=C;DP=136     GT:GQ:DP        1|1:63:25       1|1:92:31       1|1:100:44
+11     105803031       rs1512438       T       G       .       PASS    AA=G;DP=92      GT:GQ:DP        1|1:63:26       1|0:100:23      1|1:100:35
+2      206209640       rs918057        A       G       .       PASS    AA=G;DP=103     GT:GQ:DP        1|1:63:26       1|1:62:20       1|1:100:57
+16     82126762        rs4257200       G       A       .       PASS    AA=A;DP=124     GT:GQ:DP        1|1:63:26       1|1:74:25       1|1:100:74
+12     5933244 rs7958883       T       A       .       PASS    AA=A;DP=131     GT:GQ:DP        1|1:63:26       1|1:83:28       1|1:100:79
+18     21474112        rs2604482       C       T       .       PASS    AA=c;DP=126     GT:GQ:DP        1|1:63:26       1|1:86:27       1|1:100:68
+12     94326289        .       T       C       .       PASS    AA=T;DP=119     GT:GQ:DP        1|1:63:27       1|0:100:16      1|1:100:76
+12     20240015        rs7297897       T       G       .       PASS    AA=G;DP=104     GT:GQ:DP        1|1:63:27       1|0:100:24      1|1:38:53
+1      111109444       rs559051        T       C       .       PASS    AA=T;DP=126;HM2;HM3     GT:GQ:DP        1|1:63:27       1|0:69:15       1|1:100:85
+15     83232671        rs7164325       A       C       .       PASS    AA=A;DP=88      GT:GQ:DP        1|1:63:27       1|0:73:14       1|1:92:47
+14     49697698        rs7154198       C       T       .       PASS    AA=t;DP=96      GT:GQ:DP        1|1:63:27       1|1:57:23       1|1:100:34
+14     67494562        rs4902538       C       T       .       PASS    AA=T;DP=115     GT:GQ:DP        1|1:63:29       0|0:60:20       1|0:100:65
+7      56717964        rs12671935      C       T       .       PASS    AA=.;DP=133     GT:GQ:DP        1|1:63:29       0|0:90:30       1|0:100:68
+9      3899709 rs544456        G       A       .       PASS    AA=A;DP=117     GT:GQ:DP        1|1:63:29       0|1:100:29      1|0:100:55
+18     40935367        rs16978274      A       G       .       PASS    AA=G;DP=162     GT:GQ:DP        1|1:63:29       1|0:100:45      1|1:100:48
+17     32577062        rs8073074       A       G       .       PASS    AA=G;DP=108     GT:GQ:DP        1|1:63:29       1|1:47:14       1|1:100:66
+1      19658456        rs10799813      G       A       .       PASS    AA=A;DP=101     GT:GQ:DP        1|1:63:29       1|1:56:18       1|1:100:52
+4      168054985       rs10018199      G       A       .       PASS    AA=G;DP=122     GT:GQ:DP        1|1:63:30       0|1:100:21      1|0:100:33
+20     23864563        rs1741628       A       G       .       PASS    AA=a;DP=143     GT:GQ:DP        1|1:63:31       1|0:100:33      1|1:100:76
+5      99176314        rs6895053       T       C       .       PASS    AA=C;DP=144     GT:GQ:DP        1|1:63:31       1|1:100:34      1|1:100:79
+21     42034426        rs3746891       T       C       .       PASS    AA=C;DP=101     GT:GQ:DP        1|1:63:31       1|1:23:6        1|1:100:63
+13     48860989        rs7335750       C       T       .       PASS    AA=C;DP=102     GT:GQ:DP        1|1:63:31       1|1:35:11       1|1:100:60
+1      35308183        rs12088892      T       C       .       PASS    AA=T;DP=107     GT:GQ:DP        1|1:63:31       1|1:41:23       1|1:100:51
+2      151849041       rs6718415       T       C       .       PASS    AA=T;DP=94      GT:GQ:DP        1|1:63:31       1|1:43:14       1|1:100:50
+20     24525509        rs4813522       C       T       .       PASS    AA=C;DP=125     GT:GQ:DP        1|1:63:31       1|1:47:14       1|1:100:82
+2      237419504       rs1864844       T       C       .       PASS    AA=C;DP=117     GT:GQ:DP        1|1:63:31       1|1:47:20       1|1:100:65
+5      141459249       rs11167764      A       C       .       PASS    AA=C;DP=102     GT:GQ:DP        1|1:63:31       1|1:59:19       1|1:100:41
+5      79904298        rs249210        T       C       .       PASS    AA=C;DP=103     GT:GQ:DP        1|1:63:31       1|1:62:19       1|1:100:43
+7      114308692       rs2428070       A       G       .       PASS    AA=G;DP=106     GT:GQ:DP        1|1:63:31       1|1:62:19       1|1:100:58
+7      156129530       rs7804211       C       T       .       PASS    AA=T;DP=116     GT:GQ:DP        1|1:63:31       1|1:62:20       1|1:100:67
+16     77217831        rs2738573       T       C       .       PASS    AA=C;DP=124     GT:GQ:DP        1|1:63:31       1|1:68:22       1|1:100:69
+14     57099718        rs268817        A       C       .       PASS    AA=C;DP=134     GT:GQ:DP        1|1:63:31       1|1:71:22       1|1:100:83
+14     64394924        rs399508        A       T       .       PASS    AA=T;DP=118     GT:GQ:DP        1|1:63:31       1|1:77:24       1|1:100:62
+2      167065262       rs6432917       G       A       .       PASS    AA=N;DP=112     GT:GQ:DP        1|1:63:31       1|1:92:29       1|1:100:52
+1      30602270        rs585572        A       G       .       PASS    AA=G;DP=145;HM2 GT:GQ:DP        1|1:63:31       1|1:92:30       1|1:100:41
+3      137438995       rs684773        A       C       .       PASS    AA=C;DP=138     GT:GQ:DP        1|1:63:32       1|0:100:30      1|1:100:82
+20     9078749 rs59611690      T       C       .       PASS    AA=t;DP=128     GT:GQ:DP        1|1:63:33       0|0:59:23       1|0:100:71
+5      97920519        rs466259        T       C       .       PASS    AA=C;DP=140     GT:GQ:DP        1|1:63:34       0|0:60:20       1|0:100:47
+14     49382155        rs3100892       C       G       .       PASS    AA=C;DP=128     GT:GQ:DP        1|1:63:35       1|1:49:29       1|1:100:64
+8      142644713       rs307396        G       A       .       PASS    AA=g;DP=136     GT:GQ:DP        1|1:63:37       1|1:41:13       1|1:100:42
+11     111419776       rs559170        A       G       .       PASS    AA=G;DP=73      GT:GQ:DP        1|1:64:20       1|1:10:15       1|1:65:24
+5      170023005       rs2202439       G       C       .       PASS    AA=C;DP=72      GT:GQ:DP        1|1:64:20       1|1:11:10       1|1:100:35
+3      38739786        rs4076737       G       T       .       PASS    AA=T;DP=115     GT:GQ:DP        1|1:64:20       1|1:13:15       1|1:100:64
+3      113179583       rs703271        C       G       .       PASS    AA=G;DP=81      GT:GQ:DP        1|1:64:20       1|1:32:12       1|1:100:47
+15     36958179        rs11073359      T       G       .       PASS    AA=T;DP=66      GT:GQ:DP        1|1:64:21       1|1:14:13       1|1:91:31
+6      83490163        rs1708637       C       T       .       PASS    AA=T;DP=105     GT:GQ:DP        1|1:64:22       1|1:80:27       1|1:100:57
+15     24372218        rs1426217       A       G       .       PASS    AA=G;DP=124     GT:GQ:DP        1|1:64:23       0|0:100:35      1|0:100:67
+1      4757006 rs10915601      G       A       .       PASS    AA=G;DP=113;HM2;HM3     GT:GQ:DP        1|1:64:23       0|0:11:14       1|0:100:76
+17     74930223        rs4790035       C       T       .       PASS    AA=C;DP=91      GT:GQ:DP        1|1:64:23       0|0:12:5        1|0:100:64
+4      7300272 rs28412446      G       T       .       PASS    AA=g;DP=89      GT:GQ:DP        1|1:64:23       0|0:30:10       1|0:100:43
+7      57476286        rs10262907      G       A       .       PASS    AA=g;DP=74      GT:GQ:DP        1|1:64:23       0|0:33:11       1|0:100:28
+4      118939302       .       G       A       .       PASS    AA=A;DP=84      GT:GQ:DP        1|1:64:23       0|0:33:11       1|0:100:51
+15     36404779        .       G       T       .       PASS    AA=G;DP=104     GT:GQ:DP        1|1:64:23       0|0:33:22       1|0:100:59
+2      241518051       rs6756731       A       T       .       PASS    AA=a;DP=84      GT:GQ:DP        1|1:64:23       0|0:34:15       1|0:100:43
+12     126016017       rs2124525       C       T       .       PASS    AA=C;DP=91      GT:GQ:DP        1|1:64:23       0|0:36:13       1|0:100:48
+2      171357890       rs3764915       G       A       .       PASS    AA=g;DP=103     GT:GQ:DP        1|1:64:23       0|0:42:14       1|0:100:65
+1      193326533       rs4657963       C       T       .       PASS    AA=C;DP=86;HM2  GT:GQ:DP        1|1:64:23       0|0:45:17       1|0:100:45
+3      184846148       rs6809751       T       C       .       PASS    AA=T;DP=82      GT:GQ:DP        1|1:64:23       0|0:48:16       1|0:100:43
+12     59686018        rs2690317       G       A       .       PASS    AA=A;DP=88      GT:GQ:DP        1|1:64:23       0|0:48:16       1|0:100:51
+17     17471078        rs55793618      G       T       .       PASS    AA=G;DP=109     GT:GQ:DP        1|1:64:23       0|0:48:17       1|0:100:67
+1      39912769        rs784602        C       A       .       PASS    AA=C;DP=113     GT:GQ:DP        1|1:64:23       0|0:51:23       1|0:100:67
+1      64634030        rs7533109       C       T       .       PASS    AA=c;DP=106;HM2 GT:GQ:DP        1|1:64:23       0|0:51:28       1|0:100:55
+13     105859381       rs9587131       C       T       .       PASS    AA=C;DP=112     GT:GQ:DP        1|1:64:23       0|0:53:29       1|0:100:61
+11     128558210       rs2439791       A       G       .       PASS    AA=G;DP=94      GT:GQ:DP        1|1:64:23       0|0:54:18       1|0:100:53
+7      131809101       .       G       A       .       PASS    AA=g;DP=96      GT:GQ:DP        1|1:64:23       0|0:54:18       1|0:100:54
+9      90578408        rs4132021       C       T       .       PASS    AA=C;DP=93      GT:GQ:DP        1|1:64:23       0|0:57:19       1|0:100:51
+4      106488379       rs17035478      T       C       .       PASS    AA=T;DP=101     GT:GQ:DP        1|1:64:23       0|0:57:19       1|0:100:60
+11     23511280        rs11027296      C       T       .       PASS    AA=T;DP=107     GT:GQ:DP        1|1:64:23       0|0:57:19       1|0:100:65
+7      67068520        rs7789153       T       C       .       PASS    AA=C;DP=97      GT:GQ:DP        1|1:64:23       0|0:57:20       1|0:100:55
+8      1113695 rs13254037      A       G       .       PASS    AA=A;DP=105     GT:GQ:DP        1|1:64:23       0|0:57:20       1|0:100:61
+5      134834353       rs10042579      C       T       .       PASS    AA=T;DP=95      GT:GQ:DP        1|1:64:23       0|0:60:20       1|0:100:50
+2      64407286        rs6714101       G       A       .       PASS    AA=G;DP=87      GT:GQ:DP        1|1:64:23       0|0:60:21       1|0:100:36
+4      180463292       .       C       A       .       PASS    AA=C;DP=83      GT:GQ:DP        1|1:64:23       0|0:60:21       1|0:100:39
+2      39503569        rs7566368       A       T       .       PASS    AA=A;DP=102     GT:GQ:DP        1|1:64:23       0|0:60:21       1|0:100:60
+5      101494667       rs405289        C       G       .       PASS    AA=G;DP=110     GT:GQ:DP        1|1:64:23       0|0:63:21       1|0:100:67
+3      156199495       rs11914581      G       A       .       PASS    AA=G;DP=109     GT:GQ:DP        1|1:64:23       0|0:63:22       1|0:100:67
+2      35007651        .       A       T       .       PASS    AA=T;DP=127     GT:GQ:DP        1|1:64:23       0|0:63:22       1|0:100:78
+1      162478590       rs6697356       C       G       .       PASS    AA=G;DP=94;HM2  GT:GQ:DP        1|1:64:23       0|0:66:22       1|0:100:48
+11     126660197       rs10893663      G       A       .       PASS    AA=A;DP=103     GT:GQ:DP        1|1:64:23       0|0:66:22       1|0:100:56
+19     20524827        rs10422005      G       A       .       PASS    AA=-;DP=105     GT:GQ:DP        1|1:64:23       0|0:66:22       1|0:100:61
+6      92077331        rs2207613       A       T       .       PASS    AA=A;DP=107     GT:GQ:DP        1|1:64:23       0|0:66:23       1|0:100:61
+5      109637287       rs58944782      G       A       .       PASS    AA=A;DP=120     GT:GQ:DP        1|1:64:23       0|0:66:24       1|0:100:75
+4      41017813        rs7688479       C       T       .       PASS    AA=C;DP=122     GT:GQ:DP        1|1:64:23       0|0:69:24       1|0:100:77
+6      22153965        rs1928173       A       G       .       PASS    AA=A;DP=104     GT:GQ:DP        1|1:64:23       0|0:69:29       1|0:100:52
+13     96302458        rs9300368       G       C       .       PASS    AA=C;DP=103     GT:GQ:DP        1|1:64:23       0|0:72:24       1|0:100:54
+6      99987782        rs4840043       G       A       .       PASS    AA=G;DP=102     GT:GQ:DP        1|1:64:23       0|0:72:25       1|0:100:43
+7      10600470        rs61095210      T       C       .       PASS    AA=T;DP=105     GT:GQ:DP        1|1:64:23       0|0:75:25       1|0:100:54
+20     22989392        rs16984886      T       C       .       PASS    AA=T;DP=120     GT:GQ:DP        1|1:64:23       0|0:75:25       1|0:100:69
+12     30911422        rs2434120       C       A       .       PASS    AA=c;DP=104     GT:GQ:DP        1|1:64:23       0|0:81:27       1|0:100:51
+X      150072647       rs180490        T       C       .       PASS    AA=C;DP=137     GT:GQ:DP        1|1:64:23       0|0:84:29       1|0:100:42
+7      124693107       rs11768346      G       A       .       PASS    AA=G;DP=112     GT:GQ:DP        1|1:64:23       0|0:90:30       1|0:100:58
+2      7623396 rs57467563      T       G       .       PASS    AA=T;DP=116     GT:GQ:DP        1|1:64:23       0|0:93:31       1|0:100:62
+8      26690506        rs6557946       A       G       .       PASS    AA=G;DP=133     GT:GQ:DP        1|1:64:23       0|0:93:31       1|0:100:75
+11     792379  rs10902221      T       C       .       PASS    AA=C;DP=116     GT:GQ:DP        1|1:64:23       0|0:9:12        1|0:100:80
+14     106039763       rs2337936       C       G       .       PASS    AA=c;DP=75      GT:GQ:DP        1|1:64:24       0|0:24:9        1|0:100:36
+2      38199284        rs232546        A       C       .       PASS    AA=A;DP=101     GT:GQ:DP        1|1:64:24       0|0:33:11       1|0:100:65
+19     17591056        rs954373        G       A       .       PASS    AA=G;DP=82      GT:GQ:DP        1|1:64:24       0|0:39:13       1|0:100:44
+19     12187355        rs2459047       G       A       .       PASS    AA=g;DP=101     GT:GQ:DP        1|1:64:24       0|0:54:18       1|0:100:59
+7      133608836       rs1901207       G       A       .       PASS    AA=A;DP=94      GT:GQ:DP        1|1:64:24       0|0:54:19       1|0:100:53
+16     7532381 rs8052494       C       G       .       PASS    AA=C;DP=102     GT:GQ:DP        1|1:64:24       0|0:57:19       1|0:100:56
+5      143127872       rs17100863      G       A       .       PASS    AA=G;DP=116     GT:GQ:DP        1|1:64:24       0|0:69:23       1|0:100:72
+4      67036087        rs1398549       C       G       .       PASS    AA=G;DP=125     GT:GQ:DP        1|1:64:24       0|0:69:23       1|0:100:78
+19     58474897        .       G       T       .       PASS    AA=-;DP=103     GT:GQ:DP        1|1:64:24       0|0:72:24       1|0:100:45
+16     78837276        rs3922607       C       T       .       PASS    AA=C;DP=102     GT:GQ:DP        1|1:64:24       0|0:72:25       1|0:100:54
+11     116649565       rs12286404      T       C       .       PASS    AA=T;DP=104     GT:GQ:DP        1|1:64:24       0|0:75:25       1|0:100:54
+8      82471934        rs10088208      C       T       .       PASS    AA=T;DP=95      GT:GQ:DP        1|1:64:24       0|0:75:26       1|0:100:45
+15     31969112        rs919469        G       C       .       PASS    AA=G;DP=122     GT:GQ:DP        1|1:64:24       0|0:76:32       1|0:100:68
+18     46172534        rs16951872      C       T       .       PASS    AA=C;DP=132     GT:GQ:DP        1|1:64:24       0|0:87:30       1|0:100:79
+9      96101365        rs12343413      A       G       .       PASS    AA=A;DP=114     GT:GQ:DP        1|1:64:25       0|0:25:15       1|0:100:73
+14     55648600        .       T       C       .       PASS    AA=T;DP=101     GT:GQ:DP        1|1:64:25       0|0:51:19       1|0:100:57
+2      178071669       rs1374437       T       C       .       PASS    AA=T;DP=94      GT:GQ:DP        1|1:64:25       0|0:54:18       1|0:100:50
+5      124167660       rs6595549       G       C       .       PASS    AA=C;DP=131     GT:GQ:DP        1|1:64:25       0|0:63:23       1|0:100:84
+5      119518648       rs17146190      A       G       .       PASS    AA=A;DP=120     GT:GQ:DP        1|1:64:26       0|0:46:21       1|0:100:77
+6      121199474       rs1339013       G       A       .       PASS    AA=G;DP=90      GT:GQ:DP        1|1:64:26       0|0:57:19       1|0:100:46
+18     65440582        rs9958399       G       A       .       PASS    AA=A;DP=136     GT:GQ:DP        1|1:64:26       1|0:100:27      1|1:100:80
+2      148609975       rs6727555       A       C       .       PASS    AA=C;DP=100     GT:GQ:DP        1|1:64:26       1|1:29:8        1|1:100:64
+10     113991004       rs1986539       C       T       .       PASS    AA=T;DP=107     GT:GQ:DP        1|1:64:26       1|1:50:15       1|1:100:72
+11     67125413        rs11227848      A       G       .       PASS    AA=G;DP=115     GT:GQ:DP        1|1:64:26       1|1:56:17       1|1:100:74
+8      80405686        rs11778283      C       T       .       PASS    AA=C;DP=84      GT:GQ:DP        1|1:64:27       1|0:38:9        1|1:100:46
+9      30391266        rs6476201       G       T       .       PASS    AA=T;DP=95      GT:GQ:DP        1|1:64:27       1|1:32:9        1|1:100:60
+7      61631605        rs6651049       A       G       .       PASS    AA=.;DP=99      GT:GQ:DP        1|1:64:27       1|1:50:15       1|1:100:57
+6      163985092       rs4235947       T       C       .       PASS    AA=T;DP=101     GT:GQ:DP        1|1:64:27       1|1:53:16       1|1:100:48
+7      103209715       rs745538        C       T       .       PASS    AA=T;DP=106     GT:GQ:DP        1|1:64:27       1|1:53:16       1|1:100:65
+1      181437022       rs647947        T       C       .       PASS    AA=T;DP=129;HM2 GT:GQ:DP        1|1:64:27       1|1:74:24       1|1:100:80
+17     70080896        rs11869075      C       A       .       PASS    AA=c;DP=139     GT:GQ:DP        1|1:64:27       1|1:77:24       1|1:100:87
+16     61230828        rs288605        A       G       .       PASS    AA=G;DP=130     GT:GQ:DP        1|1:64:27       1|1:80:26       1|1:100:78
+1      29991223        rs1372379       C       T       .       PASS    AA=c;DP=104;HM2;HM3     GT:GQ:DP        1|1:64:27       1|1:83:26       1|1:100:40
+12     116036339       rs3862136       A       G       .       PASS    AA=G;DP=122     GT:GQ:DP        1|1:64:27       1|1:86:27       1|1:100:67
+1      165124085       rs10753745      A       C       .       PASS    AA=C;DP=101;HM2 GT:GQ:DP        1|1:64:28       0|1:79:16       1|0:100:47
+7      128366902       rs3823536       G       A       .       PASS    AA=G;DP=117     GT:GQ:DP        1|1:64:28       1|0:100:16      1|1:100:70
+10     118237303       rs4751975       T       C       .       PASS    AA=T;DP=121     GT:GQ:DP        1|1:64:29       0|1:100:26      1|0:100:67
+13     107273514       rs7325927       C       T       .       PASS    AA=T;DP=129     GT:GQ:DP        1|1:64:29       0|1:100:34      1|0:100:66
+3      189042991       rs2713716       G       A       .       PASS    AA=A;DP=125     GT:GQ:DP        1|1:64:30       0|0:66:23       1|0:100:72
+6      160580684       rs315988        T       C       .       PASS    AA=C;DP=140     GT:GQ:DP        1|1:64:30       0|0:84:28       1|0:100:83
+11     2420620 rs35197079      A       C       .       PASS    AA=A;DP=107     GT:GQ:DP        1|1:64:30       1|0:100:27      1|1:100:41
+11     95554246        rs7117004       T       C       .       PASS    AA=T;DP=120     GT:GQ:DP        1|1:64:30       1|0:88:18       1|1:100:71
+14     63035145        rs1255626       T       C       .       PASS    AA=T;DP=117     GT:GQ:DP        1|1:64:30       1|1:54:28       1|1:100:61
+7      138952026       rs17161054      G       T       .       PASS    AA=G;DP=154     GT:GQ:DP        1|1:64:31       0|0:72:24       1|0:100:97
+16     26638421        rs918668        C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        1|1:64:31       1|1:56:17       1|1:100:67
+15     92128825        rs12911103      C       T       .       PASS    AA=C;DP=149     GT:GQ:DP        1|1:64:32       0|0:45:17       1|0:100:101
+22     41555118        rs5758962       A       C       .       PASS    AA=A;DP=119     GT:GQ:DP        1|1:64:32       0|0:75:25       1|0:100:62
+4      71489591        rs28660432      G       A       .       PASS    AA=A;DP=122     GT:GQ:DP        1|1:64:32       1|1:49:20       1|1:100:43
+11     26384198        rs6484205       C       T       .       PASS    AA=T;DP=136     GT:GQ:DP        1|1:64:33       0|1:86:26       1|0:100:79
+18     5098633 rs292293        A       G       .       PASS    AA=A;DP=115     GT:GQ:DP        1|1:64:33       1|0:100:27      1|1:100:44
+3      64218713        rs3846225       A       C       .       PASS    AA=A;DP=137     GT:GQ:DP        1|1:64:33       1|0:100:27      1|1:100:79
+2      72095012        rs7568074       A       G       .       PASS    AA=G;DP=141     GT:GQ:DP        1|1:64:33       1|0:100:34      1|1:100:74
+22     21378930        rs5759387       G       T       .       PASS    AA=G;DP=129     GT:GQ:DP        1|1:64:33       1|0:92:31       1|1:100:64
+3      13434234        rs6769612       A       G       .       PASS    AA=A;DP=153     GT:GQ:DP        1|1:64:34       0|1:100:34      1|0:100:44
+5      9375870 rs16882443      T       C       .       PASS    AA=C;DP=100     GT:GQ:DP        1|1:64:34       0|1:90:18       1|0:100:48
+7      41564663        rs567855        A       C       .       PASS    AA=A;DP=139     GT:GQ:DP        1|1:64:36       1|0:100:30      1|1:100:77
+4      59727069        rs7664569       A       C       .       PASS    AA=N;DP=114     GT:GQ:DP        1|1:65:20       1|1:100:34      1|1:100:60
+6      136101116       rs911507        A       G       .       PASS    AA=G;DP=113     GT:GQ:DP        1|1:65:20       1|1:100:36      1|1:100:57
+16     76621079        rs4888722       C       T       .       PASS    AA=-;DP=70      GT:GQ:DP        1|1:65:20       1|1:20:14       1|1:100:33
+4      39734304        rs1704155       T       C       .       PASS    AA=C;DP=78      GT:GQ:DP        1|1:65:20       1|1:20:5        1|1:100:53
+18     53321734        rs635460        C       T       .       PASS    AA=T;DP=96      GT:GQ:DP        1|1:65:20       1|1:22:20       1|1:100:57
+1      6072059 rs4908764       T       C       .       PASS    AA=C;DP=81      GT:GQ:DP        1|1:65:20       1|1:23:6        1|1:100:45
+19     2726723 rs6510701       C       T       .       PASS    AA=T;DP=81      GT:GQ:DP        1|1:65:20       1|1:24:15       1|1:100:37
+6      151338727       rs1321881       C       T       .       PASS    AA=C;DP=76      GT:GQ:DP        1|1:65:20       1|1:26:7        1|1:100:37
+3      165093318       rs7614006       C       T       .       PASS    AA=T;DP=71      GT:GQ:DP        1|1:65:20       1|1:29:8        1|1:100:42
+22     33122760        rs2103536       A       G       .       PASS    AA=a;DP=81      GT:GQ:DP        1|1:65:20       1|1:30:10       1|1:100:49
+3      71909676        rs7632932       C       A       .       PASS    AA=N;DP=108     GT:GQ:DP        1|1:65:20       1|1:30:18       1|1:100:66
+4      140862215       rs345982        G       T       .       PASS    AA=T;DP=70      GT:GQ:DP        1|1:65:20       1|1:31:19       1|1:94:21
+14     31184860        rs2120138       A       T       .       PASS    AA=A;DP=74      GT:GQ:DP        1|1:65:20       1|1:32:9        1|1:100:47
+7      140510115       rs1012435       G       A       .       PASS    AA=G;DP=99      GT:GQ:DP        1|1:65:20       1|1:34:15       1|1:100:64
+11     25339198        rs7949391       C       T       .       PASS    AA=C;DP=91      GT:GQ:DP        1|1:65:20       1|1:36:18       1|1:100:48
+12     125123156       rs6489046       C       T       .       PASS    AA=C;DP=69      GT:GQ:DP        1|1:65:20       1|1:38:11       1|1:100:28
+13     64525288        rs4884599       A       T       .       PASS    AA=T;DP=87      GT:GQ:DP        1|1:65:20       1|1:38:11       1|1:100:41
+1      21818577        rs2995002       A       G       .       PASS    AA=G;DP=123;HM2 GT:GQ:DP        1|1:65:20       1|1:38:11       1|1:100:47
+4      127535090       rs560397        A       T       .       PASS    AA=A;DP=65      GT:GQ:DP        1|1:65:20       1|1:38:12       1|1:74:35
+3      19315915        rs1493927       T       C       .       PASS    AA=C;DP=104     GT:GQ:DP        1|1:65:20       1|1:38:16       1|1:100:68
+12     22557184        rs12303966      T       G       .       PASS    AA=T;DP=80      GT:GQ:DP        1|1:65:20       1|1:38:22       1|1:100:37
+3      165641563       rs1120023       A       G       .       PASS    AA=A;DP=77      GT:GQ:DP        1|1:65:20       1|1:41:12       1|1:100:45
+2      72477120        rs628432        A       G       .       PASS    AA=G;DP=103     GT:GQ:DP        1|1:65:20       1|1:41:12       1|1:100:72
+1      98428330        rs822558        G       T       .       PASS    AA=T;DP=60;HM2  GT:GQ:DP        1|1:65:20       1|1:41:12       1|1:95:18
+6      62080044        rs1360942       A       G       .       PASS    AA=G;DP=80      GT:GQ:DP        1|1:65:20       1|1:41:14       1|1:100:43
+7      66985011        rs6949068       A       G       .       PASS    AA=a;DP=94      GT:GQ:DP        1|1:65:20       1|1:41:14       1|1:100:59
+6      42137666        rs2493832       G       A       .       PASS    AA=A;DP=76      GT:GQ:DP        1|1:65:20       1|1:41:15       1|1:100:34
+18     42795761        rs2156047       G       T       .       PASS    AA=T;DP=99      GT:GQ:DP        1|1:65:20       1|1:41:19       1|1:100:58
+2      166232207       rs2390292       T       A       .       PASS    AA=T;DP=73      GT:GQ:DP        1|1:65:20       1|1:43:24       1|1:100:26
+4      55261400        rs2969156       A       C       .       PASS    AA=C;DP=84      GT:GQ:DP        1|1:65:20       1|1:43:24       1|1:100:28
+9      31476171        rs2481576       T       C       .       PASS    AA=C;DP=107     GT:GQ:DP        1|1:65:20       1|1:43:24       1|1:100:54
+7      121193860       rs6972380       A       G       .       PASS    AA=a;DP=76      GT:GQ:DP        1|1:65:20       1|1:44:13       1|1:100:44
+1      238960166       rs12116542      T       C       .       PASS    AA=t;DP=80      GT:GQ:DP        1|1:65:20       1|1:44:13       1|1:100:47
+12     69658657        rs10748165      C       T       .       PASS    AA=T;DP=73      GT:GQ:DP        1|1:65:20       1|1:44:14       1|1:100:41
+2      204469921       rs2352547       A       G       .       PASS    AA=G;DP=109     GT:GQ:DP        1|1:65:20       1|1:44:14       1|1:100:74
+6      29736416        rs3135050       T       C       .       PASS    AA=t;DP=100     GT:GQ:DP        1|1:65:20       1|1:44:18       1|1:100:62
+2      56675387        rs12713318      T       G       .       PASS    AA=G;DP=97      GT:GQ:DP        1|1:65:20       1|1:44:27       1|1:100:50
+2      1107511 rs28873988      C       T       .       PASS    AA=C;DP=75      GT:GQ:DP        1|1:65:20       1|1:47:14       1|1:99:33
+21     17062039        rs6517716       A       G       .       PASS    AA=T;DP=88      GT:GQ:DP        1|1:65:20       1|1:47:15       1|1:100:53
+15     83279414        rs2242048       A       G       .       PASS    AA=A;DP=94      GT:GQ:DP        1|1:65:20       1|1:47:18       1|1:100:54
+2      188638806       rs4667209       A       G       .       PASS    AA=a;DP=94      GT:GQ:DP        1|1:65:20       1|1:49:26       1|1:100:48
+8      47624171        rs4872671       C       T       .       PASS    AA=T;DP=64      GT:GQ:DP        1|1:65:20       1|1:50:15       1|1:100:20
+14     46478322        rs1954237       A       C       .       PASS    AA=C;DP=80      GT:GQ:DP        1|1:65:20       1|1:50:15       1|1:100:44
+17     435475  rs2657616       A       C       .       PASS    AA=C;DP=95      GT:GQ:DP        1|1:65:20       1|1:50:15       1|1:100:58
+12     45954618        rs214668        G       A       .       PASS    AA=A;DP=94      GT:GQ:DP        1|1:65:20       1|1:50:15       1|1:100:60
+3      175898039       rs552008        G       A       .       PASS    AA=A;DP=99      GT:GQ:DP        1|1:65:20       1|1:50:15       1|1:100:66
+12     94787568        rs10735335      G       A       .       PASS    AA=G;DP=78      GT:GQ:DP        1|1:65:20       1|1:50:16       1|1:100:32
+5      42296451        rs10057394      T       C       .       PASS    AA=t;DP=100     GT:GQ:DP        1|1:65:20       1|1:50:16       1|1:100:64
+13     64630580        rs778438        C       T       .       PASS    AA=T;DP=97      GT:GQ:DP        1|1:65:20       1|1:50:17       1|1:100:61
+1      188238815       rs10920282      A       G       .       PASS    AA=G;DP=85      GT:GQ:DP        1|1:65:20       1|1:51:21       1|1:100:33
+11     37929395        rs4639909       A       T       .       PASS    AA=T;DP=90      GT:GQ:DP        1|1:65:20       1|1:53:16       1|1:100:41
+4      132762947       rs350962        G       C       .       PASS    AA=c;DP=81      GT:GQ:DP        1|1:65:20       1|1:53:16       1|1:100:43
+9      3866916 rs4741862       C       T       .       PASS    AA=T;DP=94      GT:GQ:DP        1|1:65:20       1|1:53:16       1|1:100:55
+5      165583357       rs4504400       T       C       .       PASS    AA=C;DP=97      GT:GQ:DP        1|1:65:20       1|1:53:16       1|1:100:59
+4      63179081        rs6838641       A       T       .       PASS    AA=T;DP=101     GT:GQ:DP        1|1:65:20       1|1:53:16       1|1:100:65
+3      99316206        rs7633931       A       G       .       PASS    AA=G;DP=87      GT:GQ:DP        1|1:65:20       1|1:53:17       1|1:100:35
+11     33045141        rs12276196      G       A       .       PASS    AA=A;DP=127     GT:GQ:DP        1|1:65:20       1|1:53:17       1|1:100:56
+10     105070565       rs7093667       T       C       .       PASS    AA=C;DP=103     GT:GQ:DP        1|1:65:20       1|1:53:18       1|1:100:65
+3      157095313       rs6441027       G       A       .       PASS    AA=A;DP=104     GT:GQ:DP        1|1:65:20       1|1:53:19       1|1:100:63
+3      20310477        rs9817443       G       T       .       PASS    AA=T;DP=78      GT:GQ:DP        1|1:65:20       1|1:56:17       1|1:100:42
+1      81356219        rs596920        C       T       .       PASS    AA=T;DP=80;HM2  GT:GQ:DP        1|1:65:20       1|1:56:17       1|1:100:44
+14     40483462        .       C       T       .       PASS    AA=T;DP=86      GT:GQ:DP        1|1:65:20       1|1:56:18       1|1:100:48
+8      22215625        rs7006392       A       G       .       PASS    AA=G;DP=102     GT:GQ:DP        1|1:65:20       1|1:56:18       1|1:100:67
+5      124520722       rs6886216       G       A       .       PASS    AA=G;DP=93      GT:GQ:DP        1|1:65:20       1|1:56:19       1|1:100:54
+12     16890793        rs12296630      T       C       .       PASS    AA=T;DP=92      GT:GQ:DP        1|1:65:20       1|1:57:25       1|1:100:49
+18     47648128        rs1947875       T       C       .       PASS    AA=t;DP=93      GT:GQ:DP        1|1:65:20       1|1:58:22       1|1:100:52
+8      20395738        rs17092620      A       G       .       PASS    AA=G;DP=113     GT:GQ:DP        1|1:65:20       1|1:58:23       1|1:100:72
+7      13505226        rs6979402       T       A       .       PASS    AA=T;DP=73      GT:GQ:DP        1|1:65:20       1|1:59:18       1|1:100:24
+1      246851413       rs11485852      T       A       .       PASS    AA=.;DP=81      GT:GQ:DP        1|1:65:20       1|1:59:18       1|1:100:44
+8      9690145 rs7837054       A       G       .       PASS    AA=G;DP=89      GT:GQ:DP        1|1:65:20       1|1:59:18       1|1:100:50
+4      90854476        rs356208        A       T       .       PASS    AA=T;DP=88      GT:GQ:DP        1|1:65:20       1|1:59:19       1|1:100:49
+2      188301862       rs62182009      T       A       .       PASS    AA=N;DP=78      GT:GQ:DP        1|1:65:20       1|1:59:27       1|1:100:25
+3      1133170 rs7625400       G       A       .       PASS    AA=A;DP=83      GT:GQ:DP        1|1:65:20       1|1:62:19       1|1:100:43
+4      120991041       rs7695614       A       T       .       PASS    AA=T;DP=98      GT:GQ:DP        1|1:65:20       1|1:62:19       1|1:100:59
+4      156081301       .       A       G       .       PASS    AA=G;DP=114     GT:GQ:DP        1|1:65:20       1|1:62:19       1|1:100:77
+7      13795385        rs10224655      A       T       .       PASS    AA=T;DP=70      GT:GQ:DP        1|1:65:20       1|1:62:20       1|1:100:22
+6      145454504       rs503345        C       T       .       PASS    AA=T;DP=91      GT:GQ:DP        1|1:65:20       1|1:62:20       1|1:100:50
+3      85485070        rs1433712       C       T       .       PASS    AA=T;DP=93      GT:GQ:DP        1|1:65:20       1|1:62:20       1|1:100:52
+14     46751539        rs10138385      G       A       .       PASS    AA=A;DP=95      GT:GQ:DP        1|1:65:20       1|1:62:20       1|1:100:54
+7      23841970        rs2390824       C       T       .       PASS    AA=T;DP=99      GT:GQ:DP        1|1:65:20       1|1:62:20       1|1:100:59
+16     5915970 rs10852671      T       C       .       PASS    AA=C;DP=126     GT:GQ:DP        1|1:65:20       1|1:62:20       1|1:100:84
+2      82396616        rs11893752      C       T       .       PASS    AA=T;DP=102     GT:GQ:DP        1|1:65:20       1|1:63:27       1|1:100:61
+5      114765437       rs35561259      T       C       .       PASS    AA=C;DP=114     GT:GQ:DP        1|1:65:20       1|1:64:23       1|1:100:71
+11     59595541        rs573612        A       T       .       PASS    AA=N;DP=82      GT:GQ:DP        1|1:65:20       1|1:65:20       1|1:100:32
+1      162156908       rs1596597       A       G       .       PASS    AA=G;DP=84;HM2  GT:GQ:DP        1|1:65:20       1|1:65:20       1|1:100:35
+1      22675315        rs1267000       G       C       .       PASS    AA=C;DP=91      GT:GQ:DP        1|1:65:20       1|1:65:20       1|1:100:53
+2      206613731       rs818013        T       G       .       PASS    AA=G;DP=99      GT:GQ:DP        1|1:65:20       1|1:65:20       1|1:100:59
+13     34229832        rs7981708       T       C       .       PASS    AA=C;DP=110     GT:GQ:DP        1|1:65:20       1|1:65:20       1|1:100:68
+10     117172268       rs649292        G       C       .       PASS    AA=C;DP=110     GT:GQ:DP        1|1:65:20       1|1:65:20       1|1:100:70
+12     113591759       rs474463        T       C       .       PASS    AA=C;DP=85      GT:GQ:DP        1|1:65:20       1|1:65:21       1|1:100:40
+5      165450849       rs2132523       C       T       .       PASS    AA=T;DP=84      GT:GQ:DP        1|1:65:20       1|1:65:21       1|1:100:41
+7      33552762        rs2598408       C       T       .       PASS    AA=T;DP=101     GT:GQ:DP        1|1:65:20       1|1:65:21       1|1:100:59
+5      149104436       rs6892990       A       T       .       PASS    AA=T;DP=145     GT:GQ:DP        1|1:65:20       1|1:65:23       1|1:100:48
+8      66126596        rs4262355       T       C       .       PASS    AA=C;DP=76      GT:GQ:DP        1|1:65:20       1|1:68:21       1|1:100:27
+7      103490878       .       T       C       .       PASS    AA=C;DP=88      GT:GQ:DP        1|1:65:20       1|1:68:21       1|1:100:43
+2      130350173       rs13398480      A       T       .       PASS    AA=T;DP=101     GT:GQ:DP        1|1:65:20       1|1:68:21       1|1:100:60
+5      87240519        rs1358573       G       A       .       PASS    AA=A;DP=87      GT:GQ:DP        1|1:65:20       1|1:68:22       1|1:100:42
+12     113785174       rs1991388       C       T       .       PASS    AA=T;DP=100     GT:GQ:DP        1|1:65:20       1|1:68:24       1|1:100:56
+7      149079760       rs855649        G       C       .       PASS    AA=N;DP=91      GT:GQ:DP        1|1:65:20       1|1:71:22       1|1:100:39
+5      30014665        rs10044813      T       A       .       PASS    AA=A;DP=92      GT:GQ:DP        1|1:65:20       1|1:71:22       1|1:100:47
+21     31136526        rs2833124       A       G       .       PASS    AA=a;DP=92      GT:GQ:DP        1|1:65:20       1|1:71:22       1|1:100:51
+15     58434237        rs2085037       A       G       .       PASS    AA=G;DP=106     GT:GQ:DP        1|1:65:20       1|1:71:22       1|1:100:64
+4      126650507       rs1506352       T       C       .       PASS    AA=C;DP=126     GT:GQ:DP        1|1:65:20       1|1:71:22       1|1:100:85
+8      139286800       rs7460883       C       T       .       PASS    AA=C;DP=114     GT:GQ:DP        1|1:65:20       1|1:71:23       1|1:100:73
+16     68406222        rs7193221       C       G       .       PASS    AA=G;DP=100     GT:GQ:DP        1|1:65:20       1|1:71:24       1|1:100:55
+2      150421403       rs6437111       C       T       .       PASS    AA=T;DP=105     GT:GQ:DP        1|1:65:20       1|1:74:23       1|1:100:60
+3      77077880        rs4855994       G       C       .       PASS    AA=C;DP=81      GT:GQ:DP        1|1:65:20       1|1:74:24       1|1:100:26
+6      167675423       rs2981978       A       G       .       PASS    AA=a;DP=110     GT:GQ:DP        1|1:65:20       1|1:74:24       1|1:100:68
+2      52726585        rs13405002      A       G       .       PASS    AA=G;DP=114     GT:GQ:DP        1|1:65:20       1|1:74:24       1|1:100:71
+6      120082411       rs12211678      A       T       .       PASS    AA=A;DP=97      GT:GQ:DP        1|1:65:20       1|1:74:27       1|1:100:50
+2      157135839       rs1469652       T       C       .       PASS    AA=C;DP=86      GT:GQ:DP        1|1:65:20       1|1:77:24       1|1:100:33
+2      222175299       rs2952835       C       T       .       PASS    AA=T;DP=91      GT:GQ:DP        1|1:65:20       1|1:77:24       1|1:100:47
+4      30013867        rs10017780      C       T       .       PASS    AA=T;DP=99      GT:GQ:DP        1|1:65:20       1|1:77:24       1|1:100:54
+8      5227689 rs13267935      G       C       .       PASS    AA=.;DP=90      GT:GQ:DP        1|1:65:20       1|1:77:26       1|1:100:46
+9      105014575       rs1448584       G       T       .       PASS    AA=T;DP=125     GT:GQ:DP        1|1:65:20       1|1:78:30       1|1:100:76
+10     68734454        rs10762163      C       T       .       PASS    AA=T;DP=101     GT:GQ:DP        1|1:65:20       1|1:80:25       1|1:100:56
+8      1539944 rs2956955       T       C       .       PASS    AA=C;DP=117     GT:GQ:DP        1|1:65:20       1|1:80:25       1|1:100:75
+7      37110620        rs10263072      G       A       .       PASS    AA=G;DP=127     GT:GQ:DP        1|1:65:20       1|1:80:25       1|1:100:76
+18     64525104        rs429487        G       C       .       PASS    AA=C;DP=105     GT:GQ:DP        1|1:65:20       1|1:80:26       1|1:100:29
+10     31917876        rs7083838       G       C       .       PASS    AA=C;DP=116     GT:GQ:DP        1|1:65:20       1|1:80:26       1|1:100:70
+X      108430076       rs1205525       T       C       .       PASS    AA=C;DP=117     GT:GQ:DP        1|1:65:20       1|1:80:27       1|1:100:42
+4      55444661        rs4864936       T       A       .       PASS    AA=T;DP=132     GT:GQ:DP        1|1:65:20       1|1:80:27       1|1:100:83
+13     104515717       rs7139496       A       G       .       PASS    AA=A;DP=103     GT:GQ:DP        1|1:65:20       1|1:83:26       1|1:100:58
+7      145761523       rs1724498       G       A       .       PASS    AA=g;DP=106     GT:GQ:DP        1|1:65:20       1|1:83:26       1|1:100:58
+1      243424986       rs6695592       A       G       .       PASS    AA=G;DP=114;HM2 GT:GQ:DP        1|1:65:20       1|1:83:28       1|1:100:56
+1      49994461        rs3903684       G       A       .       PASS    AA=A;DP=88;HM2  GT:GQ:DP        1|1:65:20       1|1:86:27       1|1:100:41
+16     22698365        rs210118        C       G       .       PASS    AA=G;DP=98      GT:GQ:DP        1|1:65:20       1|1:86:27       1|1:100:51
+1      120018853       rs487884        C       T       .       PASS    AA=C;DP=100;HM2 GT:GQ:DP        1|1:65:20       1|1:86:27       1|1:100:52
+2      215629320       rs10932586      A       T       .       PASS    AA=A;DP=103     GT:GQ:DP        1|1:65:20       1|1:86:27       1|1:100:54
+4      126272879       rs4834019       G       C       .       PASS    AA=C;DP=114     GT:GQ:DP        1|1:65:20       1|1:86:28       1|1:100:67
+13     105809302       rs353781        T       C       .       PASS    AA=C;DP=117     GT:GQ:DP        1|1:65:20       1|1:86:28       1|1:100:69
+12     36995204        rs1843874       C       T       .       PASS    AA=T;DP=103     GT:GQ:DP        1|1:65:20       1|1:89:28       1|1:100:54
+3      98985162        rs3856568       G       A       .       PASS    AA=A;DP=105     GT:GQ:DP        1|1:65:20       1|1:89:28       1|1:100:57
+2      188762356       rs4527172       T       C       .       PASS    AA=T;DP=118     GT:GQ:DP        1|1:65:20       1|1:89:28       1|1:100:70
+11     47072591        rs4752955       T       G       .       PASS    AA=G;DP=102     GT:GQ:DP        1|1:65:20       1|1:89:32       1|1:100:51
+20     11906686        rs2206808       A       G       .       PASS    AA=A;DP=106     GT:GQ:DP        1|1:65:20       1|1:91:33       1|1:100:50
+13     49038530        rs7325667       G       A       .       PASS    AA=A;DP=127     GT:GQ:DP        1|1:65:20       1|1:92:29       1|1:100:75
+8      94824402        rs3134012       T       C       .       PASS    AA=C;DP=118     GT:GQ:DP        1|1:65:20       1|1:95:30       1|1:100:57
+4      157766664       rs7669373       G       C       .       PASS    AA=A;DP=108     GT:GQ:DP        1|1:65:20       1|1:98:32       1|1:100:55
+16     1502027 rs8048290       T       C       .       PASS    AA=C;DP=73      GT:GQ:DP        1|1:65:21       1|0:3:5 1|1:96:49
+5      97766704        rs961713        C       T       .       PASS    AA=T;DP=120     GT:GQ:DP        1|1:65:21       1|1:100:32      1|1:100:67
+10     56869304        rs1413670       G       A       .       PASS    AA=A;DP=84      GT:GQ:DP        1|1:65:21       1|1:27:23       1|1:100:39
+5      112460849       rs6874314       C       G       .       PASS    AA=C;DP=63      GT:GQ:DP        1|1:65:21       1|1:29:10       1|1:92:27
+3      149016533       rs6785065       C       T       .       PASS    AA=T;DP=68      GT:GQ:DP        1|1:65:21       1|1:34:17       1|1:97:21
+1      193401482       rs609912        G       A       .       PASS    AA=A;DP=74      GT:GQ:DP        1|1:65:21       1|1:34:19       1|1:98:34
+3      155348092       rs1527801       C       G       .       PASS    AA=G;DP=72      GT:GQ:DP        1|1:65:21       1|1:35:10       1|1:100:43
+12     123829157       rs701104        A       C       .       PASS    AA=C;DP=71      GT:GQ:DP        1|1:65:21       1|1:35:11       1|1:85:28
+2      167580323       rs6726002       G       C       .       PASS    AA=N;DP=84      GT:GQ:DP        1|1:65:21       1|1:37:16       1|1:100:48
+8      18097878        rs1000214       T       G       .       PASS    AA=.;DP=82      GT:GQ:DP        1|1:65:21       1|1:39:16       1|1:100:46
+1      213673961       rs2174771       G       A       .       PASS    AA=A;DP=57;HM2;HM3      GT:GQ:DP        1|1:65:21       1|1:3:8 1|1:72:23
+7      134156849       rs1823775       G       T       .       PASS    AA=T;DP=68      GT:GQ:DP        1|1:65:21       1|1:41:12       1|1:100:28
+9      99338808        rs7872664       A       G       .       PASS    AA=G;DP=74      GT:GQ:DP        1|1:65:21       1|1:41:12       1|1:100:39
+2      152437774       rs770610        G       A       .       PASS    AA=A;DP=86      GT:GQ:DP        1|1:65:21       1|1:41:12       1|1:100:53
+19     5166826 rs10414946      T       G       .       PASS    AA=G;DP=79      GT:GQ:DP        1|1:65:21       1|1:41:13       1|1:100:38
+8      25107952        rs11998542      T       G       .       PASS    AA=T;DP=106     GT:GQ:DP        1|1:65:21       1|1:41:23       1|1:100:64
+13     45499536        rs7982998       C       T       .       PASS    AA=c;DP=100     GT:GQ:DP        1|1:65:21       1|1:43:18       1|1:100:64
+12     59159407        rs4372489       A       G       .       PASS    AA=G;DP=84      GT:GQ:DP        1|1:65:21       1|1:44:15       1|1:100:47
+4      61496602        rs3100734       A       C       .       PASS    AA=C;DP=123     GT:GQ:DP        1|1:65:21       1|1:44:24       1|1:100:66
+4      75231506        rs490645        G       A       .       PASS    AA=G;DP=85      GT:GQ:DP        1|1:65:21       1|1:47:14       1|1:100:49
+3      167930146       rs7625771       G       A       .       PASS    AA=a;DP=65      GT:GQ:DP        1|1:65:21       1|1:50:15       1|1:100:22
+21     20569441        rs2407643       A       T       .       PASS    AA=t;DP=86      GT:GQ:DP        1|1:65:21       1|1:50:17       1|1:100:39
+6      106929608       rs710093        G       A       .       PASS    AA=A;DP=108     GT:GQ:DP        1|1:65:21       1|1:50:18       1|1:100:67
+12     126288290       rs2695962       A       G       .       PASS    AA=G;DP=107     GT:GQ:DP        1|1:65:21       1|1:50:19       1|1:100:68
+11     21541678        rs10741888      A       T       .       PASS    AA=T;DP=63      GT:GQ:DP        1|1:65:21       1|1:53:16       1|1:100:24
+22     43911661        rs132818        T       A       .       PASS    AA=N;DP=87      GT:GQ:DP        1|1:65:21       1|1:53:16       1|1:100:49
+21     36013145        rs2835104       A       G       .       PASS    AA=G;DP=113     GT:GQ:DP        1|1:65:21       1|1:53:18       1|1:100:78
+3      15484032        rs2345106       A       G       .       PASS    AA=A;DP=112     GT:GQ:DP        1|1:65:21       1|1:55:26       1|1:100:66
+10     72555259        rs1935148       T       C       .       PASS    AA=C;DP=89      GT:GQ:DP        1|1:65:21       1|1:56:17       1|1:100:41
+13     107630234       rs1931336       G       A       .       PASS    AA=A;DP=85      GT:GQ:DP        1|1:65:21       1|1:56:18       1|1:100:45
+12     83090480        rs2086621       A       G       .       PASS    AA=a;DP=91      GT:GQ:DP        1|1:65:21       1|1:56:18       1|1:100:52
+14     97740677        rs857229        C       T       .       PASS    AA=T;DP=116     GT:GQ:DP        1|1:65:21       1|1:56:18       1|1:100:79
+7      95625160        rs4729239       C       G       .       PASS    AA=C;DP=103     GT:GQ:DP        1|1:65:21       1|1:56:19       1|1:100:64
+9      9710438 rs6477408       T       C       .       PASS    AA=T;DP=84      GT:GQ:DP        1|1:65:21       1|1:59:18       1|1:100:35
+6      75102301        rs9343139       A       G       .       PASS    AA=G;DP=102     GT:GQ:DP        1|1:65:21       1|1:59:20       1|1:100:62
+15     83506125        rs6496770       T       A       .       PASS    AA=A;DP=90      GT:GQ:DP        1|1:65:21       1|1:62:19       1|1:100:49
+13     86634853        rs1967454       G       A       .       PASS    AA=A;DP=89      GT:GQ:DP        1|1:65:21       1|1:62:20       1|1:100:42
+1      67743547        rs2066195       C       T       .       PASS    AA=C;DP=92      GT:GQ:DP        1|1:65:21       1|1:65:20       1|1:100:40
+5      169335963       rs2338809       A       G       .       PASS    AA=G;DP=101     GT:GQ:DP        1|1:65:21       1|1:65:22       1|1:100:56
+7      40440540        rs7787193       C       T       .       PASS    AA=T;DP=92      GT:GQ:DP        1|1:65:21       1|1:68:21       1|1:100:50
+11     40866751        rs4755564       G       A       .       PASS    AA=G;DP=87      GT:GQ:DP        1|1:65:21       1|1:74:23       1|1:100:24
+3      22536089        rs9654039       C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        1|1:65:21       1|1:74:23       1|1:100:71
+10     15206911        rs1326207       A       G       .       PASS    AA=G;DP=120     GT:GQ:DP        1|1:65:21       1|1:74:23       1|1:100:76
+7      77135713        rs7790628       G       A       .       PASS    AA=A;DP=109     GT:GQ:DP        1|1:65:21       1|1:74:24       1|1:100:64
+14     84861750        rs11848241      T       C       .       PASS    AA=C;DP=127     GT:GQ:DP        1|1:65:21       1|1:74:24       1|1:100:83
+6      111860143       rs6568678       C       T       .       PASS    AA=T;DP=121     GT:GQ:DP        1|1:65:21       1|1:77:25       1|1:100:57
+5      36918776        rs158623        G       A       .       PASS    AA=A;DP=85      GT:GQ:DP        1|1:65:21       1|1:80:25       1|1:100:23
+3      29555052        rs35906 C       T       .       PASS    AA=T;DP=117     GT:GQ:DP        1|1:65:21       1|1:80:25       1|1:100:67
+3      1649924 rs449247        A       G       .       PASS    AA=G;DP=107     GT:GQ:DP        1|1:65:21       1|1:80:26       1|1:100:60
+X      84296239        rs2032572       T       C       .       PASS    AA=N;DP=113     GT:GQ:DP        1|1:65:21       1|1:89:29       1|1:100:34
+7      29106101        rs323201        C       T       .       PASS    AA=T;DP=103     GT:GQ:DP        1|1:65:21       1|1:92:29       1|1:100:53
+4      45250183        rs699555        C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        1|1:65:21       1|1:95:32       1|1:100:45
+10     56330959        rs1454472       A       C       .       PASS    AA=C;DP=80      GT:GQ:DP        1|1:65:22       1|0:31:14       1|1:93:33
+6      156446594       rs1375714       G       A       .       PASS    AA=G;DP=131     GT:GQ:DP        1|1:65:22       1|1:100:35      1|1:100:75
+7      125481224       rs12673982      C       T       .       PASS    AA=T;DP=84      GT:GQ:DP        1|1:65:22       1|1:47:14       1|1:100:48
+12     58845052        rs1602840       C       G       .       PASS    AA=G;DP=96      GT:GQ:DP        1|1:65:22       1|1:56:17       1|1:100:49
+10     83666389        rs6584407       T       C       .       PASS    AA=A;DP=90      GT:GQ:DP        1|1:65:22       1|1:59:18       1|1:100:38
+7      79924797        rs2944398       G       A       .       PASS    AA=A;DP=90      GT:GQ:DP        1|1:65:22       1|1:62:20       1|1:100:49
+8      6279742 rs2440420       G       C       .       PASS    AA=C;DP=118     GT:GQ:DP        1|1:65:22       1|1:65:20       1|1:100:76
+3      16531043        rs1429161       C       G       .       PASS    AA=N;DP=120     GT:GQ:DP        1|1:65:22       1|1:68:25       1|1:100:73
+6      9064761 rs1886071       A       G       .       PASS    AA=G;DP=109     GT:GQ:DP        1|1:65:22       1|1:71:23       1|1:100:57
+2      105675551       rs2122967       C       T       .       PASS    AA=T;DP=120     GT:GQ:DP        1|1:65:22       1|1:74:23       1|1:100:74
+11     91420460        rs2512972       T       C       .       PASS    AA=C;DP=110     GT:GQ:DP        1|1:65:22       1|1:83:26       1|1:100:65
+8      104195437       rs6997977       C       T       .       PASS    AA=T;DP=111     GT:GQ:DP        1|1:65:22       1|1:83:27       1|1:100:59
+2      208994019       rs1370377       T       C       .       PASS    AA=C;DP=88      GT:GQ:DP        1|1:65:23       1|1:50:16       1|1:100:50
+4      178091124       rs1545089       C       T       .       PASS    AA=T;DP=112     GT:GQ:DP        1|1:65:23       1|1:59:20       1|1:100:30
+3      197355580       rs4927885       C       T       .       PASS    AA=c;DP=127     GT:GQ:DP        1|1:65:23       1|1:68:22       1|1:100:83
+17     12251600        rs7207862       G       T       .       PASS    AA=T;DP=140     GT:GQ:DP        1|1:65:25       0|0:38:24       1|0:100:92
+10     10611742        rs7901990       A       C       .       PASS    AA=C;DP=124     GT:GQ:DP        1|1:65:26       1|1:38:18       1|1:100:82
+19     49928569        rs2927434       T       C       .       PASS    AA=C;DP=124     GT:GQ:DP        1|1:65:26       1|1:46:14       1|1:100:44
+22     21031767        rs2213149       G       A       .       PASS    AA=-;DP=98      GT:GQ:DP        1|1:65:26       1|1:53:17       1|1:100:56
+11     76419955        rs631043        A       G       .       PASS    AA=G;DP=97      GT:GQ:DP        1|1:65:26       1|1:56:17       1|1:100:43
+6      15877247        rs220893        T       C       .       PASS    AA=C;DP=123     GT:GQ:DP        1|1:65:26       1|1:83:27       1|1:100:72
+14     94564997        rs11160226      C       T       .       PASS    AA=T;DP=110     GT:GQ:DP        1|1:65:26       1|1:83:28       1|1:100:56
+2      66513907        rs13033745      G       T       .       PASS    AA=T;DP=111     GT:GQ:DP        1|1:65:27       1|1:50:17       1|1:100:68
+9      103990783       rs10739833      G       A       .       PASS    AA=A;DP=112     GT:GQ:DP        1|1:65:27       1|1:56:17       1|1:100:68
+11     110005535       rs7937056       G       A       .       PASS    AA=N;DP=92      GT:GQ:DP        1|1:65:27       1|1:59:19       1|1:100:35
+2      117442935       rs6758551       A       C       .       PASS    AA=c;DP=90      GT:GQ:DP        1|1:65:28       1|0:100:11      1|1:100:47
+4      22271587        rs2618952       C       G       .       PASS    AA=G;DP=116     GT:GQ:DP        1|1:65:28       1|0:94:27       1|1:100:57
+15     26210129        .       C       A       .       PASS    AA=c;DP=93      GT:GQ:DP        1|1:65:28       1|1:7:14        1|1:70:50
+15     96013675        rs664265        A       C       .       PASS    AA=C;DP=106     GT:GQ:DP        1|1:65:29       1|1:50:15       1|1:100:59
+21     45552711        rs9977947       G       A       .       PASS    AA=G;DP=106     GT:GQ:DP        1|1:65:30       1|0:100:17      1|1:100:60
+2      168713334       rs2390638       G       T       .       PASS    AA=T;DP=151     GT:GQ:DP        1|1:65:30       1|1:44:25       1|1:100:95
+8      108837566       rs6981446       C       T       .       PASS    AA=T;DP=124     GT:GQ:DP        1|1:65:30       1|1:71:22       1|1:100:72
+21     43168863        rs6586257       G       A       .       PASS    AA=g;DP=123     GT:GQ:DP        1|1:65:32       0|0:5:19        1|0:100:73
+15     59814696        rs12911757      A       G       .       PASS    AA=N;DP=101     GT:GQ:DP        1|1:65:32       1|1:10:15       1|1:96:56
+5      25608478        rs6452266       A       C       .       PASS    AA=A;DP=89      GT:GQ:DP        1|1:65:32       1|1:13:15       1|1:100:42
+22     47223436        rs2001079       C       T       .       PASS    AA=C;DP=113     GT:GQ:DP        1|1:65:33       0|0:42:14       1|0:100:67
+4      111346041       rs7672039       G       A       .       PASS    AA=g;DP=95      GT:GQ:DP        1|1:65:35       0|0:60:20       1|0:100:35
+4      130615994       rs2117059       A       G       .       PASS    AA=A;DP=112     GT:GQ:DP        1|1:65:35       0|0:78:27       1|0:100:51
+6      26613015        rs9467774       C       A       .       PASS    AA=A;DP=133     GT:GQ:DP        1|1:65:35       0|0:81:27       1|0:100:72
+11     121308724       rs1219444       T       A       .       PASS    AA=A;DP=156     GT:GQ:DP        1|1:65:35       0|1:100:22      1|0:100:60
+21     37178287        rs4817826       C       T       .       PASS    AA=T;DP=105     GT:GQ:DP        1|1:65:36       1|1:27:13       1|1:100:48
+16     80277495        rs12934449      T       C       .       PASS    AA=C;DP=102     GT:GQ:DP        1|1:65:36       1|1:41:12       1|1:100:44
+17     23039533        rs4318259       G       A       .       PASS    AA=G;DP=106     GT:GQ:DP        1|1:65:37       1|1:50:17       1|1:100:51
+20     40993808        rs761027        A       G       .       PASS    AA=G;DP=155     GT:GQ:DP        1|1:65:38       1|0:100:34      1|1:100:83
+11     2966014 rs7127415       T       C       .       PASS    AA=C;DP=73      GT:GQ:DP        1|1:66:22       1|0:100:17      1|1:75:25
+2      234290036       rs6744284       C       T       .       PASS    AA=c;DP=119     GT:GQ:DP        1|1:66:22       1|0:100:18      1|1:100:80
+1      239082034       rs2995377       T       A       .       PASS    AA=T;DP=96      GT:GQ:DP        1|1:66:22       1|0:100:20      1|1:100:54
+1      211651764       rs398891        T       A       .       PASS    AA=A;DP=103;HM2 GT:GQ:DP        1|1:66:22       1|0:100:20      1|1:100:61
+16     76413095        rs2966046       A       T       .       PASS    AA=T;DP=108     GT:GQ:DP        1|1:66:22       1|0:100:20      1|1:100:67
+8      74347986        rs2605882       G       C       .       PASS    AA=C;DP=109     GT:GQ:DP        1|1:66:22       1|0:100:21      1|1:100:56
+7      122728299       rs7457068       T       G       .       PASS    AA=T;DP=108     GT:GQ:DP        1|1:66:22       1|0:100:21      1|1:100:60
+18     50657965        rs12604231      G       A       .       PASS    AA=A;DP=97      GT:GQ:DP        1|1:66:22       1|0:100:22      1|1:100:47
+6      22720736        rs13217022      T       C       .       PASS    AA=T;DP=106     GT:GQ:DP        1|1:66:22       1|0:100:22      1|1:100:62
+4      120182035       rs12507195      A       C       .       PASS    AA=A;DP=102     GT:GQ:DP        1|1:66:22       1|0:100:22      1|1:77:47
+7      34282566        rs775974        G       C       .       PASS    AA=C;DP=119     GT:GQ:DP        1|1:66:22       1|0:100:22      1|1:93:31
+2      77614599        rs1882680       A       T       .       PASS    AA=T;DP=90      GT:GQ:DP        1|1:66:22       1|0:100:23      1|1:100:44
+6      161816220       .       C       T       .       PASS    AA=T;DP=119     GT:GQ:DP        1|1:66:22       1|0:100:23      1|1:100:73
+1      234346714       rs7518533       G       T       .       PASS    AA=T;DP=100     GT:GQ:DP        1|1:66:22       1|0:100:24      1|1:100:54
+2      105131984       rs4241217       T       C       .       PASS    AA=C;DP=117     GT:GQ:DP        1|1:66:22       1|0:100:24      1|1:100:72
+2      68640546        rs6741037       C       T       .       PASS    AA=T;DP=128     GT:GQ:DP        1|1:66:22       1|0:100:24      1|1:100:81
+21     30607888        rs2040174       C       G       .       PASS    AA=C;DP=102     GT:GQ:DP        1|1:66:22       1|0:100:25      1|1:100:53
+10     122409084       rs2420756       C       G       .       PASS    AA=C;DP=104     GT:GQ:DP        1|1:66:22       1|0:100:25      1|1:100:58
+10     91940097        rs10748541      C       T       .       PASS    AA=C;DP=109     GT:GQ:DP        1|1:66:22       1|0:100:25      1|1:100:62
+10     112774540       rs4437961       T       A       .       PASS    AA=T;DP=126     GT:GQ:DP        1|1:66:22       1|0:100:25      1|1:100:75
+5      14998161        rs835105        A       T       .       PASS    AA=A;DP=124     GT:GQ:DP        1|1:66:22       1|0:100:26      1|1:100:78
+12     115666091       rs10850707      C       T       .       PASS    AA=c;DP=116     GT:GQ:DP        1|1:66:22       1|0:100:28      1|1:100:66
+2      48851673        rs3863003       C       G       .       PASS    AA=C;DP=138     GT:GQ:DP        1|1:66:22       1|0:100:29      1|1:100:88
+X      23271009        rs1405902       G       A       .       PASS    AA=A;DP=122     GT:GQ:DP        1|1:66:22       1|0:100:30      1|1:100:37
+9      31967566        rs1565431       G       C       .       PASS    AA=G;DP=120     GT:GQ:DP        1|1:66:22       1|0:100:31      1|1:100:69
+11     80284958        rs2133156       T       C       .       PASS    AA=C;DP=99      GT:GQ:DP        1|1:66:22       1|0:100:31      1|1:87:29
+5      53250494        rs60633530      C       T       .       PASS    AA=C;DP=101     GT:GQ:DP        1|1:66:22       1|0:100:32      1|1:100:36
+3      3750161 rs6442828       G       A       .       PASS    AA=G;DP=111     GT:GQ:DP        1|1:66:22       1|0:21:22       1|1:100:65
+17     76122587        rs9747234       T       C       .       PASS    AA=T;DP=97      GT:GQ:DP        1|1:66:22       1|0:22:9        1|1:100:69
+5      122139109       rs1870560       G       C       .       PASS    AA=C;DP=104     GT:GQ:DP        1|1:66:22       1|0:35:16       1|1:100:67
+17     61713216        rs7213790       C       A       .       PASS    AA=A;DP=104     GT:GQ:DP        1|1:66:22       1|0:45:20       1|1:100:61
+5      122226239       rs154509        T       A       .       PASS    AA=T;DP=101     GT:GQ:DP        1|1:66:22       1|0:50:17       1|1:100:62
+17     29140509        rs1844739       C       G       .       PASS    AA=G;DP=105     GT:GQ:DP        1|1:66:22       1|0:52:19       1|1:100:65
+16     81121748        rs9936386       G       A       .       PASS    AA=A;DP=93      GT:GQ:DP        1|1:66:22       1|0:55:23       1|1:100:48
+7      154856474       .       T       C       .       PASS    AA=C;DP=97      GT:GQ:DP        1|1:66:22       1|0:72:15       1|1:100:63
+4      86831412        rs2101135       T       A       .       PASS    AA=A;DP=74      GT:GQ:DP        1|1:66:22       1|0:76:15       1|1:84:28
+3      30778992        rs795438        A       T       .       PASS    AA=A;DP=84      GT:GQ:DP        1|1:66:22       1|0:78:16       1|1:98:45
+13     85290587        rs7318889       G       A       .       PASS    AA=A;DP=111     GT:GQ:DP        1|1:66:22       1|0:78:20       1|1:100:70
+1      105873625       rs1710791       G       T       .       PASS    AA=T;DP=74      GT:GQ:DP        1|1:66:22       1|0:81:9        1|1:100:45
+3      176062244       rs11925646      A       G       .       PASS    AA=G;DP=92      GT:GQ:DP        1|1:66:22       1|0:83:20       1|1:100:50
+15     65076292        rs2615181       T       C       .       PASS    AA=T;DP=89      GT:GQ:DP        1|1:66:22       1|0:89:18       1|1:88:43
+2      16013863        rs12617996      G       C       .       PASS    AA=C;DP=112     GT:GQ:DP        1|1:66:22       1|0:90:21       1|1:100:63
+1      246539236       rs4390209       A       T       .       PASS    AA=a;DP=78      GT:GQ:DP        1|1:66:22       1|0:92:12       1|1:100:44
+15     84169636        rs4479185       C       T       .       PASS    AA=T;DP=105     GT:GQ:DP        1|1:66:22       1|0:92:22       1|1:100:63
+1      214300332       rs10746461      G       A       .       PASS    AA=A;DP=87      GT:GQ:DP        1|1:66:22       1|0:93:17       1|1:100:49
+6      23083474        rs2473677       G       A       .       PASS    AA=A;DP=118     GT:GQ:DP        1|1:66:22       1|0:94:23       1|1:100:69
+7      27690395        rs42115 C       T       .       PASS    AA=T;DP=88      GT:GQ:DP        1|1:66:22       1|0:95:18       1|1:100:49
+20     9643071 rs6056818       T       C       .       PASS    AA=t;DP=84      GT:GQ:DP        1|1:66:22       1|0:97:14       1|1:100:41
+4      84549755        rs58580967      C       A       .       PASS    AA=A;DP=109     GT:GQ:DP        1|1:66:22       1|0:97:20       1|1:87:63
+2      189916376       rs1356977       G       C       .       PASS    AA=G;DP=84      GT:GQ:DP        1|1:66:23       0|1:100:15      1|0:100:45
+11     32577166        rs201856        C       G       .       PASS    AA=G;DP=82      GT:GQ:DP        1|1:66:23       0|1:100:16      1|0:100:35
+6      133768683       rs296428        C       G       .       PASS    AA=C;DP=91      GT:GQ:DP        1|1:66:23       0|1:100:16      1|0:100:39
+3      74921420        rs1609108       T       G       .       PASS    AA=G;DP=108     GT:GQ:DP        1|1:66:23       0|1:100:16      1|0:100:69
+3      196799399       .       A       G       .       PASS    AA=.;DP=108     GT:GQ:DP        1|1:66:23       0|1:100:17      1|0:100:58
+13     100639450       rs1662073       C       A       .       PASS    AA=A;DP=114     GT:GQ:DP        1|1:66:23       0|1:100:17      1|0:100:74
+19     48902630        rs538587        C       G       .       PASS    AA=G;DP=114     GT:GQ:DP        1|1:66:23       0|1:100:17      1|0:100:77
+11     132446252       rs4601796       C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        1|1:66:23       0|1:100:17      1|0:100:81
+22     42346192        rs6006731       C       T       .       PASS    AA=C;DP=112     GT:GQ:DP        1|1:66:23       0|1:100:18      1|0:100:31
+3      165511984       rs6791219       C       A       .       PASS    AA=C;DP=97      GT:GQ:DP        1|1:66:23       0|1:100:19      1|0:100:52
+7      17783004        rs2723511       C       T       .       PASS    AA=C;DP=94      GT:GQ:DP        1|1:66:23       0|1:100:19      1|0:100:52
+5      163336872       rs1363493       C       A       .       PASS    AA=A;DP=108     GT:GQ:DP        1|1:66:23       0|1:100:19      1|0:100:65
+6      134978082       rs6928242       T       G       .       PASS    AA=N;DP=97      GT:GQ:DP        1|1:66:23       0|1:100:20      1|0:100:52
+3      192785350       rs6444565       T       G       .       PASS    AA=G;DP=99      GT:GQ:DP        1|1:66:23       0|1:100:20      1|0:100:56
+10     296863  rs3131991       A       G       .       PASS    AA=G;DP=126     GT:GQ:DP        1|1:66:23       0|1:100:20      1|0:100:77
+5      13995258        rs4702003       A       T       .       PASS    AA=T;DP=88      GT:GQ:DP        1|1:66:23       0|1:100:21      1|0:100:44
+9      2875496 rs55713587      C       G       .       PASS    AA=G;DP=103     GT:GQ:DP        1|1:66:23       0|1:100:21      1|0:100:47
+1      192597094       rs7517770       G       A       .       PASS    AA=G;DP=85      GT:GQ:DP        1|1:66:23       0|1:100:22      1|0:100:40
+16     50285160        rs12708956      T       C       .       PASS    AA=T;DP=118     GT:GQ:DP        1|1:66:23       0|1:100:22      1|0:100:71
+3      8072571 rs7650591       T       C       .       PASS    AA=T;DP=104     GT:GQ:DP        1|1:66:23       0|1:100:23      1|0:100:56
+13     37974583        rs7994859       T       C       .       PASS    AA=C;DP=107     GT:GQ:DP        1|1:66:23       0|1:100:23      1|0:100:59
+3      89122674        rs12495136      G       A       .       PASS    AA=A;DP=103     GT:GQ:DP        1|1:66:23       0|1:100:24      1|0:100:56
+3      126668154       rs7646098       G       A       .       PASS    AA=A;DP=110     GT:GQ:DP        1|1:66:23       0|1:100:24      1|0:100:66
+10     67766473        rs4746570       T       A       .       PASS    AA=A;DP=92      GT:GQ:DP        1|1:66:23       0|1:100:26      1|0:100:32
+7      110835815       rs38744 A       G       .       PASS    AA=G;DP=101     GT:GQ:DP        1|1:66:23       0|1:100:26      1|0:100:50
+9      109209291       rs7867845       C       G       .       PASS    AA=G;DP=113     GT:GQ:DP        1|1:66:23       0|1:100:26      1|0:100:65
+8      107074210       rs10808408      C       T       .       PASS    AA=T;DP=140     GT:GQ:DP        1|1:66:23       0|1:100:26      1|0:100:92
+2      119368088       rs10198793      G       C       .       PASS    AA=G;DP=113     GT:GQ:DP        1|1:66:23       0|1:100:27      1|0:100:38
+7      144471657       rs725849        T       C       .       PASS    AA=T;DP=111     GT:GQ:DP        1|1:66:23       0|1:100:27      1|0:100:61
+16     19578165        rs9934689       G       A       .       PASS    AA=A;DP=116     GT:GQ:DP        1|1:66:23       0|1:100:28      1|0:100:65
+13     73764724        rs4885161       A       G       .       PASS    AA=G;DP=127     GT:GQ:DP        1|1:66:23       0|1:100:28      1|0:100:77
+2      39190485        rs59732351      C       T       .       PASS    AA=T;DP=127     GT:GQ:DP        1|1:66:23       0|1:100:31      1|0:100:72
+2      160704207       rs16844830      A       G       .       PASS    AA=A;DP=105     GT:GQ:DP        1|1:66:23       0|1:14:13       1|0:100:69
+10     89304818        rs11202446      T       A       .       PASS    AA=T;DP=96      GT:GQ:DP        1|1:66:23       0|1:55:14       1|0:100:55
+18     24178569        rs11564307      G       C       .       PASS    AA=C;DP=111     GT:GQ:DP        1|1:66:23       0|1:59:12       1|0:100:75
+3      195360502       rs9827508       A       G       .       PASS    AA=G;DP=106     GT:GQ:DP        1|1:66:23       0|1:62:14       1|0:100:70
+16     927997  rs5029141       T       C       .       PASS    AA=T;DP=110     GT:GQ:DP        1|1:66:23       0|1:64:20       1|0:100:68
+17     4609232 rs4790701       T       C       .       PASS    AA=T;DP=97      GT:GQ:DP        1|1:66:23       0|1:76:20       1|0:100:55
+14     77533552        rs9788436       T       G       .       PASS    AA=T;DP=93      GT:GQ:DP        1|1:66:23       0|1:82:18       1|0:100:54
+2      3482958 rs4555373       A       G       .       PASS    AA=G;DP=105     GT:GQ:DP        1|1:66:23       0|1:83:18       1|0:100:64
+9      20944284        rs9298812       G       C       .       PASS    AA=C;DP=97      GT:GQ:DP        1|1:66:23       0|1:91:19       1|0:100:53
+2      73209762        rs7570459       G       A       .       PASS    AA=N;DP=145     GT:GQ:DP        1|1:66:23       0|1:94:24       1|0:100:96
+11     2608169 rs10430889      A       G       .       PASS    AA=G;DP=74      GT:GQ:DP        1|1:66:23       1|0:100:19      1|1:75:25
+6      10092025        .       C       G       .       PASS    AA=G;DP=80      GT:GQ:DP        1|1:66:23       1|0:100:20      1|1:69:24
+4      120453850       rs13118936      G       A       .       PASS    AA=A;DP=98      GT:GQ:DP        1|1:66:23       1|0:100:21      1|1:100:53
+3      159499691       rs1730007       T       C       .       PASS    AA=C;DP=115     GT:GQ:DP        1|1:66:23       1|0:100:21      1|1:100:64
+15     93741815        rs12901265      G       T       .       PASS    AA=G;DP=110     GT:GQ:DP        1|1:66:23       1|0:100:22      1|1:100:66
+5      122971312       rs11241704      C       T       .       PASS    AA=C;DP=93      GT:GQ:DP        1|1:66:23       1|0:100:23      1|1:100:49
+6      16306967        rs6917177       G       A       .       PASS    AA=G;DP=113     GT:GQ:DP        1|1:66:23       1|0:100:23      1|1:100:66
+18     52810752        rs1787462       A       G       .       PASS    AA=A;DP=80      GT:GQ:DP        1|1:66:23       1|0:100:24      1|1:81:27
+7      9562199 rs2657272       G       A       .       PASS    AA=A;DP=97      GT:GQ:DP        1|1:66:23       1|0:100:25      1|1:100:50
+9      28921234        rs10757771      T       C       .       PASS    AA=C;DP=102     GT:GQ:DP        1|1:66:23       1|0:100:25      1|1:91:56
+20     43031880        rs6103944       G       A       .       PASS    AA=G;DP=101     GT:GQ:DP        1|1:66:23       1|0:100:26      1|1:100:53
+1      4713977 rs434474        A       T       .       PASS    AA=T;DP=112;HM2;HM3     GT:GQ:DP        1|1:66:23       1|0:100:26      1|1:100:63
+1      88843173        rs2130720       A       G       .       PASS    AA=A;DP=137     GT:GQ:DP        1|1:66:23       1|0:100:35      1|1:100:54
+7      146871507       rs851824        C       T       .       PASS    AA=T;DP=91      GT:GQ:DP        1|1:66:23       1|0:25:15       1|1:100:50
+19     2331688 rs12463037      T       C       .       PASS    AA=t;DP=94      GT:GQ:DP        1|1:66:23       1|0:26:19       1|1:100:44
+10     126662658       rs6597868       G       T       .       PASS    AA=T;DP=103     GT:GQ:DP        1|1:66:23       1|0:49:11       1|1:100:70
+6      135097937       rs10223556      G       A       .       PASS    AA=A;DP=107     GT:GQ:DP        1|1:66:23       1|0:56:20       1|1:100:65
+1      93373218        rs12736775      A       G       .       PASS    AA=G;DP=88      GT:GQ:DP        1|1:66:23       1|0:88:16       1|1:100:37
+8      132732546       rs1544665       G       A       .       PASS    AA=A;DP=123     GT:GQ:DP        1|1:66:23       1|0:99:25       1|1:100:76
+12     809171  rs7300056       T       A       .       PASS    AA=T;DP=100     GT:GQ:DP        1|1:66:24       0|1:100:17      1|0:100:58
+4      145409331       rs4482710       T       C       .       PASS    AA=C;DP=70      GT:GQ:DP        1|1:66:24       0|1:100:18      1|0:100:18
+6      114411701       rs62415925      T       C       .       PASS    AA=C;DP=119     GT:GQ:DP        1|1:66:24       0|1:100:18      1|0:100:77
+22     22961342        rs5996676       G       A       .       PASS    AA=.;DP=92      GT:GQ:DP        1|1:66:24       0|1:100:20      1|0:100:34
+2      219263506       rs1344642       G       A       .       PASS    AA=G;DP=134     GT:GQ:DP        1|1:66:24       0|1:100:22      1|0:100:87
+14     88675825        rs1287613       T       C       .       PASS    AA=C;DP=132     GT:GQ:DP        1|1:66:24       0|1:100:27      1|0:100:83
+1      155498052       rs4489549       C       G       .       PASS    AA=G;DP=146;HM2;HM3     GT:GQ:DP        1|1:66:24       0|1:100:27      1|0:100:95
+3      2941456 rs958895        G       A       .       PASS    AA=A;DP=143     GT:GQ:DP        1|1:66:24       0|1:100:34      1|0:100:84
+4      55502609        rs56361708      A       G       .       PASS    AA=G;DP=134     GT:GQ:DP        1|1:66:24       0|1:100:36      1|0:100:73
+6      159550165       rs418175        G       C       .       PASS    AA=C;DP=109     GT:GQ:DP        1|1:66:24       0|1:22:27       1|0:100:57
+9      123944551       rs1556217       C       T       .       PASS    AA=C;DP=140     GT:GQ:DP        1|1:66:24       0|1:53:27       1|0:100:89
+6      34344437        rs9461975       C       T       .       PASS    AA=T;DP=91      GT:GQ:DP        1|1:66:24       0|1:65:16       1|0:100:50
+9      9364091 rs1023218       C       T       .       PASS    AA=T;DP=79      GT:GQ:DP        1|1:66:24       0|1:74:15       1|0:100:37
+10     9395973 rs1149997       C       T       .       PASS    AA=T;DP=103     GT:GQ:DP        1|1:66:24       0|1:90:12       1|0:100:66
+17     19567821        rs8073794       C       G       .       PASS    AA=G;DP=111     GT:GQ:DP        1|1:66:24       0|1:94:19       1|0:100:65
+1      91770468        rs540753        A       T       .       PASS    AA=T;DP=102     GT:GQ:DP        1|1:66:24       0|1:98:14       1|0:100:63
+6      165975643       rs2983519       G       A       .       PASS    AA=N;DP=104     GT:GQ:DP        1|1:66:24       1|0:47:21       1|1:100:59
+18     9428358 rs2902766       A       G       .       PASS    AA=A;DP=85      GT:GQ:DP        1|1:66:24       1|0:90:15       1|1:88:46
+5      124112748       rs4421098       A       G       .       PASS    AA=A;DP=120     GT:GQ:DP        1|1:66:24       1|0:91:21       1|1:100:76
+10     26196734        rs4749079       A       G       .       PASS    AA=A;DP=108     GT:GQ:DP        1|1:66:24       1|0:93:25       1|1:100:59
+22     31748564        rs470011        G       A       .       PASS    AA=A;DP=117     GT:GQ:DP        1|1:66:24       1|0:97:22       1|1:100:72
+16     10136873        rs1070479       G       A       .       PASS    AA=G;DP=111     GT:GQ:DP        1|1:66:26       0|1:24:24       1|0:100:58
+1      224313286       rs10915927      G       A       .       PASS    AA=G;DP=97      GT:GQ:DP        1|1:66:26       1|0:77:16       1|1:100:55
+6      86759201        rs6915507       T       G       .       PASS    AA=N;DP=105     GT:GQ:DP        1|1:66:26       1|1:65:21       1|1:100:56
+15     90682710        rs12324208      A       T       .       PASS    AA=T;DP=108     GT:GQ:DP        1|1:66:26       1|1:74:23       1|1:100:58
+1      199434196       rs2365298       C       T       .       PASS    AA=T;DP=89      GT:GQ:DP        1|1:66:27       1|1:24:17       1|1:100:35
+11     110135038       rs1506498       A       C       .       PASS    AA=C;DP=120     GT:GQ:DP        1|1:66:27       1|1:60:25       1|1:100:68
+2      220918845       rs11887580      C       T       .       PASS    AA=C;DP=144     GT:GQ:DP        1|1:66:28       1|0:100:25      1|1:100:49
+13     28690214        rs6490374       G       A       .       PASS    AA=A;DP=98      GT:GQ:DP        1|1:66:28       1|0:84:21       1|1:100:38
+18     694901  rs2847170       T       C       .       PASS    AA=C;DP=93      GT:GQ:DP        1|1:66:28       1|0:97:18       1|1:100:34
+17     68912640        rs11077679      T       C       .       PASS    AA=t;DP=108     GT:GQ:DP        1|1:66:28       1|1:20:19       1|1:100:60
+4      106635168       rs1490610       T       C       .       PASS    AA=T;DP=102     GT:GQ:DP        1|1:66:28       1|1:22:18       1|1:92:46
+15     96553045        rs1871568       A       G       .       PASS    AA=G;DP=124     GT:GQ:DP        1|1:66:28       1|1:25:15       1|1:100:66
+4      160841895       rs1604585       G       A       .       PASS    AA=G;DP=104     GT:GQ:DP        1|1:66:28       1|1:51:21       1|1:100:52
+3      39882038        rs6599053       G       A       .       PASS    AA=G;DP=142     GT:GQ:DP        1|1:66:29       0|0:73:36       1|0:100:81
+1      65354075        rs10889520      G       A       .       PASS    AA=G;DP=126;HM2;HM3     GT:GQ:DP        1|1:66:29       0|1:100:28      1|0:100:67
+3      153044288       rs1881988       T       C       .       PASS    AA=C;DP=87      GT:GQ:DP        1|1:66:29       1|0:100:18      1|1:44:40
+7      139843360       rs7812236       G       A       .       PASS    AA=G;DP=95      GT:GQ:DP        1|1:66:29       1|1:50:16       1|1:100:50
+20     13140291        rs6134817       A       G       .       PASS    AA=G;DP=108     GT:GQ:DP        1|1:66:30       0|1:56:18       1|0:100:60
+4      169578487       rs2634974       A       G       .       PASS    AA=.;DP=133     GT:GQ:DP        1|1:66:30       0|1:95:27       1|0:100:35
+13     88901047        rs9522567       C       T       .       PASS    AA=T;DP=118     GT:GQ:DP        1|1:66:30       1|1:77:24       1|1:100:63
+7      11465303        rs7792678       A       C       .       PASS    AA=A;DP=125     GT:GQ:DP        1|1:66:32       0|1:100:23      1|0:100:52
+12     111826981       rs1557865       T       G       .       PASS    AA=G;DP=153     GT:GQ:DP        1|1:66:32       1|1:100:32      1|1:100:87
+20     14843953        rs963576        C       T       .       PASS    AA=C;DP=142     GT:GQ:DP        1|1:66:32       1|1:100:35      1|1:100:73
+3      180049136       rs4493411       T       C       .       PASS    AA=T;DP=118     GT:GQ:DP        1|1:66:32       1|1:14:16       1|1:100:70
+5      63569793        rs11749067      T       A       .       PASS    AA=A;DP=109     GT:GQ:DP        1|1:66:32       1|1:24:17       1|1:100:58
+1      169880928       rs235877        T       C       .       PASS    AA=C;DP=107;HM2 GT:GQ:DP        1|1:66:32       1|1:38:12       1|1:100:64
+13     86223422        rs9560784       C       G       .       PASS    AA=G;DP=108     GT:GQ:DP        1|1:66:32       1|1:41:12       1|1:100:56
+4      124223572       rs6823951       T       C       .       PASS    AA=t;DP=111     GT:GQ:DP        1|1:66:32       1|1:43:31       1|1:100:47
+10     90456913        rs814642        T       C       .       PASS    AA=C;DP=105     GT:GQ:DP        1|1:66:32       1|1:50:17       1|1:100:57
+7      3689802 rs1864839       T       C       .       PASS    AA=t;DP=107     GT:GQ:DP        1|1:66:32       1|1:53:16       1|1:100:59
+10     2467434 rs7912905       A       C       .       PASS    AA=C;DP=140     GT:GQ:DP        1|1:66:32       1|1:55:28       1|1:100:79
+7      116986769       rs213950        G       A       .       PASS    AA=A;DP=102     GT:GQ:DP        1|1:66:32       1|1:56:17       1|1:100:51
+4      92784953        rs13111521      T       C       .       PASS    AA=C;DP=107     GT:GQ:DP        1|1:66:32       1|1:56:17       1|1:100:56
+10     34735514        rs7894351       C       T       .       PASS    AA=c;DP=112     GT:GQ:DP        1|1:66:32       1|1:61:26       1|1:100:55
+15     37490794        rs4548829       C       T       .       PASS    AA=c;DP=108     GT:GQ:DP        1|1:66:32       1|1:62:19       1|1:100:59
+9      6113782 rs442851        C       T       .       PASS    AA=T;DP=111     GT:GQ:DP        1|1:66:32       1|1:62:20       1|1:100:58
+11     103429866       rs361316        A       C       .       PASS    AA=C;DP=135     GT:GQ:DP        1|1:66:32       1|1:63:28       1|1:100:75
+2      41692079        rs7591438       C       T       .       PASS    AA=T;DP=124     GT:GQ:DP        1|1:66:32       1|1:68:21       1|1:100:74
+2      108281860       rs7576937       C       T       .       PASS    AA=T;DP=139     GT:GQ:DP        1|1:66:32       1|1:75:35       1|1:100:71
+4      14642951        rs6449096       G       C       .       PASS    AA=C;DP=92      GT:GQ:DP        1|1:66:33       1|0:80:13       1|1:70:39
+9      123455826       rs10818582      T       G       .       PASS    AA=N;DP=95      GT:GQ:DP        1|1:66:33       1|1:51:15       1|1:100:39
+7      75413658        rs239956        G       A       .       PASS    AA=A;DP=99      GT:GQ:DP        1|1:66:34       1|1:25:11       1|1:100:42
+3      23705744        rs60682305      T       G       .       PASS    AA=T;DP=143     GT:GQ:DP        1|1:66:36       1|1:95:30       1|1:100:77
+10     120513987       rs12358672      T       G       .       PASS    AA=T;DP=163     GT:GQ:DP        1|1:66:38       0|0:52:23       1|0:100:102
+3      5973661 rs1914410       T       G       .       PASS    AA=G;DP=105     GT:GQ:DP        1|1:66:38       1|1:49:24       1|1:100:31
+22     40347210        rs132770        A       G       .       PASS    AA=G;DP=101     GT:GQ:DP        1|1:67:21       1|1:11:4        1|1:100:72
+3      172761166       rs360425        A       G       .       PASS    AA=G;DP=82      GT:GQ:DP        1|1:67:21       1|1:11:6        1|1:100:56
+7      47477370        rs2964947       A       T       .       PASS    AA=T;DP=101     GT:GQ:DP        1|1:67:21       1|1:15:10       1|1:100:65
+6      75407386        rs2485074       A       G       .       PASS    AA=G;DP=103     GT:GQ:DP        1|1:67:23       1|1:13:14       1|1:100:63
+17     8507034 rs12452403      A       T       .       PASS    AA=A;DP=97      GT:GQ:DP        1|1:67:24       0|0:15:13       1|0:100:59
+5      1006839 rs58750352      G       A       .       PASS    AA=G;DP=82      GT:GQ:DP        1|1:67:24       0|0:36:12       1|0:100:39
+7      124959647       rs7810531       C       T       .       PASS    AA=c;DP=111     GT:GQ:DP        1|1:67:24       0|0:36:18       1|0:100:71
+3      111923327       rs9858359       C       T       .       PASS    AA=C;DP=95      GT:GQ:DP        1|1:67:24       0|0:39:15       1|0:100:57
+19     9683220 rs8105398       A       C       .       PASS    AA=a;DP=97      GT:GQ:DP        1|1:67:24       0|0:39:22       1|0:100:49
+8      117436190       rs55838219      C       T       .       PASS    AA=T;DP=115     GT:GQ:DP        1|1:67:24       0|0:42:14       1|0:100:78
+2      7045603 rs2166967       T       C       .       PASS    AA=C;DP=104     GT:GQ:DP        1|1:67:24       0|0:44:22       1|0:100:54
+3      18815937        rs7640928       A       T       .       PASS    AA=A;DP=108     GT:GQ:DP        1|1:67:24       0|0:44:26       1|0:100:58
+9      26332300        rs2105102       G       A       .       PASS    AA=N;DP=89      GT:GQ:DP        1|1:67:24       0|0:45:15       1|0:100:49
+6      87673765        rs744144        T       G       .       PASS    AA=T;DP=112     GT:GQ:DP        1|1:67:24       0|0:45:16       1|0:100:73
+3      169051622       rs1388642       A       T       .       PASS    AA=A;DP=111     GT:GQ:DP        1|1:67:24       0|0:47:26       1|0:100:63
+1      166524124       rs2300579       T       C       .       PASS    AA=T;DP=95      GT:GQ:DP        1|1:67:24       0|0:48:16       1|0:100:53
+2      104521295       rs13405030      C       T       .       PASS    AA=C;DP=117     GT:GQ:DP        1|1:67:24       0|0:48:24       1|0:100:68
+4      163267688       rs1032394       G       A       .       PASS    AA=A;DP=115     GT:GQ:DP        1|1:67:24       0|0:51:18       1|0:100:72
+9      27191745        rs558897        A       T       .       PASS    AA=T;DP=129     GT:GQ:DP        1|1:67:24       0|0:51:18       1|0:100:88
+13     52963461        rs1927854       T       C       .       PASS    AA=N;DP=99      GT:GQ:DP        1|1:67:24       0|0:52:24       1|0:100:51
+14     76415702        rs11625844      T       G       .       PASS    AA=T;DP=97      GT:GQ:DP        1|1:67:24       0|0:54:18       1|0:100:55
+7      3753421 .       A       C       .       PASS    AA=C;DP=109     GT:GQ:DP        1|1:67:24       0|0:54:18       1|0:100:67
+7      156540824       rs12536385      T       C       .       PASS    AA=C;DP=112     GT:GQ:DP        1|1:67:24       0|0:54:18       1|0:100:70
+1      33579050        rs12142201      C       T       .       PASS    AA=C;DP=119     GT:GQ:DP        1|1:67:24       0|0:54:18       1|0:100:78
+5      42457446        .       T       C       .       PASS    AA=T;DP=97      GT:GQ:DP        1|1:67:24       0|0:54:19       1|0:100:54
+6      149585689       .       A       G       .       PASS    AA=A;DP=114     GT:GQ:DP        1|1:67:24       0|0:57:19       1|0:100:71
+17     64264079        rs4541139       A       G       .       PASS    AA=A;DP=126     GT:GQ:DP        1|1:67:24       0|0:57:20       1|0:100:40
+2      77523696        .       C       T       .       PASS    AA=T;DP=136     GT:GQ:DP        1|1:67:24       0|0:60:21       1|0:100:67
+4      21077004        rs12501878      G       A       .       PASS    AA=G;DP=115     GT:GQ:DP        1|1:67:24       0|0:63:21       1|0:100:73
+2      157870767       rs3816595       T       G       .       PASS    AA=T;DP=112     GT:GQ:DP        1|1:67:24       0|0:66:22       1|0:100:66
+11     117655945       rs4938494       G       C       .       PASS    AA=C;DP=101     GT:GQ:DP        1|1:67:24       0|0:66:24       1|0:100:52
+3      135715040       rs11928499      A       G       .       PASS    AA=A;DP=88      GT:GQ:DP        1|1:67:24       0|0:69:23       1|0:100:42
+1      98978116        rs12402587      G       C       .       PASS    AA=G;DP=95;HM2  GT:GQ:DP        1|1:67:24       0|0:69:23       1|0:100:47
+8      6728378 rs2741143       A       G       .       PASS    AA=.;DP=107     GT:GQ:DP        1|1:67:24       0|0:69:23       1|0:100:61
+2      119725026       rs734846        T       G       .       PASS    AA=G;DP=132     GT:GQ:DP        1|1:67:24       0|0:69:23       1|0:100:86
+2      57046848        rs1157544       A       G       .       PASS    AA=A;DP=120     GT:GQ:DP        1|1:67:24       0|0:75:26       1|0:100:56
+3      103854727       rs6807772       G       A       .       PASS    AA=G;DP=121     GT:GQ:DP        1|1:67:24       0|0:75:26       1|0:100:69
+1      174227098       rs6425370       C       T       .       PASS    AA=T;DP=98      GT:GQ:DP        1|1:67:24       0|0:75:32       1|0:100:37
+6      157111972       rs1413601       C       T       .       PASS    AA=T;DP=111     GT:GQ:DP        1|1:67:24       0|0:78:27       1|0:100:59
+2      103417063       rs10190930      A       G       .       PASS    AA=A;DP=117     GT:GQ:DP        1|1:67:24       0|0:78:27       1|0:100:65
+19     17100566        rs7254359       G       A       .       PASS    AA=G;DP=150     GT:GQ:DP        1|1:67:24       0|0:78:33       1|0:100:52
+7      23021005        rs4719727       A       T       .       PASS    AA=T;DP=115     GT:GQ:DP        1|1:67:24       0|0:81:27       1|0:100:61
+4      89756292        rs17014285      G       A       .       PASS    AA=G;DP=114     GT:GQ:DP        1|1:67:24       0|0:84:28       1|0:100:65
+5      101424939       rs11955754      G       A       .       PASS    AA=A;DP=94      GT:GQ:DP        1|1:67:24       0|0:84:29       1|0:100:28
+3      62624199        rs11925415      A       G       .       PASS    AA=A;DP=89      GT:GQ:DP        1|1:67:25       0|0:33:12       1|0:100:52
+15     21737854        rs58663261      A       G       .       PASS    AA=.;DP=105     GT:GQ:DP        1|1:67:25       0|0:33:22       1|0:100:59
+2      98501639        .       C       T       .       PASS    AA=C;DP=112     GT:GQ:DP        1|1:67:25       0|0:34:17       1|0:100:72
+11     25641538        rs7942416       T       G       .       PASS    AA=T;DP=104     GT:GQ:DP        1|1:67:25       0|0:35:18       1|0:100:61
+13     106969832       rs7993162       A       G       .       PASS    AA=G;DP=106     GT:GQ:DP        1|1:67:25       0|0:39:19       1|0:100:61
+7      89421205        rs6966295       C       T       .       PASS    AA=T;DP=106     GT:GQ:DP        1|1:67:25       0|0:45:17       1|0:100:64
+5      132656046       rs35370156      C       T       .       PASS    AA=C;DP=101     GT:GQ:DP        1|1:67:25       0|0:48:16       1|0:100:60
+6      4621147 rs379650        T       C       .       PASS    AA=C;DP=118     GT:GQ:DP        1|1:67:25       0|0:48:17       1|0:100:74
+9      36308472        rs10972850      T       A       .       PASS    AA=A;DP=117     GT:GQ:DP        1|1:67:25       0|0:54:18       1|0:100:74
+3      55328021        rs12496300      G       A       .       PASS    AA=G;DP=124     GT:GQ:DP        1|1:67:25       0|0:57:19       1|0:100:79
+3      139015068       rs1974667       T       G       .       PASS    AA=T;DP=106     GT:GQ:DP        1|1:67:25       0|0:60:20       1|0:100:62
+16     83257210        rs16974380      G       C       .       PASS    AA=G;DP=112     GT:GQ:DP        1|1:67:25       0|0:60:20       1|0:100:68
+14     36522144        rs17105857      T       C       .       PASS    AA=T;DP=107     GT:GQ:DP        1|1:67:25       0|0:60:21       1|0:100:61
+9      11601961        .       A       C       .       PASS    AA=a;DP=96      GT:GQ:DP        1|1:67:25       0|0:66:22       1|0:100:49
+3      190158141       rs7635819       T       C       .       PASS    AA=C;DP=92      GT:GQ:DP        1|1:67:25       0|0:66:23       1|0:100:44
+13     106154024       rs4415890       C       T       .       PASS    AA=T;DP=113     GT:GQ:DP        1|1:67:25       0|0:66:23       1|0:100:66
+11     13162855        rs1552135       C       T       .       PASS    AA=C;DP=116     GT:GQ:DP        1|1:67:25       0|0:66:24       1|0:100:67
+10     32886818        rs2151366       T       C       .       PASS    AA=T;DP=117     GT:GQ:DP        1|1:67:25       0|0:69:23       1|0:100:59
+2      193565006       rs6760548       A       G       .       PASS    AA=A;DP=102     GT:GQ:DP        1|1:67:25       0|0:72:24       1|0:100:54
+12     112536601       .       T       C       .       PASS    AA=T;DP=105     GT:GQ:DP        1|1:67:25       0|0:72:26       1|0:100:56
+11     49817039        rs10769621      C       T       .       PASS    AA=.;DP=137     GT:GQ:DP        1|1:67:25       0|0:75:25       1|0:100:86
+8      123383738       rs16896891      C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        1|1:67:25       0|0:75:26       1|0:100:70
+13     59248078        rs341545        A       G       .       PASS    AA=G;DP=112     GT:GQ:DP        1|1:67:25       0|0:75:27       1|0:100:61
+7      135856276       rs1473220       T       C       .       PASS    AA=T;DP=125     GT:GQ:DP        1|1:67:25       0|0:78:27       1|0:100:74
+3      106701514       rs7652866       T       C       .       PASS    AA=T;DP=143     GT:GQ:DP        1|1:67:25       0|0:78:28       1|0:100:44
+4      171212707       rs2727523       T       C       .       PASS    AA=T;DP=122     GT:GQ:DP        1|1:67:25       0|0:81:28       1|0:100:70
+12     70970257        rs10879394      A       G       .       PASS    AA=A;DP=126     GT:GQ:DP        1|1:67:25       0|0:90:31       1|0:100:73
+6      83139485        rs770907        C       A       .       PASS    AA=A;DP=103     GT:GQ:DP        1|1:67:25       1|1:56:17       1|1:100:60
+8      2611967 rs7003361       C       G       .       PASS    AA=C;DP=107     GT:GQ:DP        1|1:67:26       0|0:45:22       1|0:100:58
+11     33537729        rs2076627       T       C       .       PASS    AA=T;DP=116     GT:GQ:DP        1|1:67:26       0|0:51:17       1|0:100:75
+3      196131778       rs4320032       C       T       .       PASS    AA=T;DP=130     GT:GQ:DP        1|1:67:26       0|0:72:26       1|0:100:78
+3      69598883        rs1001497       C       T       .       PASS    AA=T;DP=106     GT:GQ:DP        1|1:67:26       0|1:97:21       1|0:100:58
+14     76162411        rs4903439       C       A       .       PASS    AA=C;DP=85      GT:GQ:DP        1|1:67:26       1|1:39:13       1|1:100:45
+8      32105734        rs981817        G       A       .       PASS    AA=G;DP=85      GT:GQ:DP        1|1:67:26       1|1:41:12       1|1:100:51
+6      43328247        rs2651182       A       G       .       PASS    AA=G;DP=109     GT:GQ:DP        1|1:67:26       1|1:59:19       1|1:100:65
+22     32602284        rs16993207      G       A       .       PASS    AA=G;DP=116     GT:GQ:DP        1|1:67:27       1|0:100:25      1|1:100:64
+14     80909058        rs3861640       T       G       .       PASS    AA=G;DP=110     GT:GQ:DP        1|1:67:27       1|1:23:19       1|1:100:65
+22     33585931        rs5995021       G       A       .       PASS    AA=A;DP=128     GT:GQ:DP        1|1:67:27       1|1:45:22       1|1:100:81
+7      19586168        rs7805790       T       A       .       PASS    AA=T;DP=78      GT:GQ:DP        1|1:67:27       1|1:47:14       1|1:100:31
+4      10805327        rs58171777      G       C       .       PASS    AA=C;DP=119     GT:GQ:DP        1|1:67:27       1|1:54:27       1|1:100:65
+6      137550985       rs9402878       T       G       .       PASS    AA=G;DP=82      GT:GQ:DP        1|1:67:27       1|1:59:19       1|1:100:28
+2      34817877        rs3115265       T       A       .       PASS    AA=A;DP=109     GT:GQ:DP        1|1:67:27       1|1:80:25       1|1:100:59
+10     112398971       rs10885006      T       C       .       PASS    AA=T;DP=83      GT:GQ:DP        1|1:67:28       0|1:78:15       1|0:100:41
+4      73745143        rs28608630      A       G       .       PASS    AA=a;DP=81      GT:GQ:DP        1|1:67:28       1|0:100:22      1|1:63:21
+10     43154595        rs2252758       A       G       .       PASS    AA=G;DP=108     GT:GQ:DP        1|1:67:28       1|0:99:15       1|1:100:64
+2      240732893       rs6742687       T       A       .       PASS    AA=A;DP=81      GT:GQ:DP        1|1:67:28       1|1:13:10       1|1:100:31
+20     54092368        rs6024607       C       T       .       PASS    AA=C;DP=85      GT:GQ:DP        1|1:67:28       1|1:13:10       1|1:100:35
+16     25419413        rs11645456      T       A       .       PASS    AA=T;DP=108     GT:GQ:DP        1|1:67:28       1|1:41:23       1|1:100:59
+19     1229665 rs757294        A       G       .       PASS    AA=G;DP=91      GT:GQ:DP        1|1:67:28       1|1:50:15       1|1:100:43
+13     58319712        rs7983390       T       A       .       PASS    AA=a;DP=91      GT:GQ:DP        1|1:67:28       1|1:50:16       1|1:100:46
+7      16017561        rs1569129       C       T       .       PASS    AA=T;DP=121     GT:GQ:DP        1|1:67:28       1|1:56:18       1|1:100:74
+10     60165772        rs6481434       A       C       .       PASS    AA=C;DP=112     GT:GQ:DP        1|1:67:28       1|1:65:20       1|1:100:63
+7      79136275        rs2689775       T       G       .       PASS    AA=G;DP=104     GT:GQ:DP        1|1:67:28       1|1:77:24       1|1:100:51
+6      21954627        rs4710989       T       C       .       PASS    AA=C;DP=113     GT:GQ:DP        1|1:67:28       1|1:83:26       1|1:100:59
+17     47488525        rs2970029       T       G       .       PASS    AA=G;DP=121     GT:GQ:DP        1|1:67:28       1|1:83:27       1|1:100:67
+21     43975474        rs2838358       C       T       .       PASS    AA=T;DP=139     GT:GQ:DP        1|1:67:28       1|1:92:29       1|1:100:82
+6      20413204        rs1887480       T       C       .       PASS    AA=C;DP=119     GT:GQ:DP        1|1:67:28       1|1:92:32       1|1:100:48
+4      138442505       rs10000011      C       T       .       PASS    AA=T;DP=103     GT:GQ:DP        1|1:67:29       0|1:88:20       1|0:100:53
+13     46704488        rs7995117       A       G       .       PASS    AA=G;DP=107     GT:GQ:DP        1|1:67:29       1|1:54:22       1|1:100:57
+7      7993699 rs37990 A       C       .       PASS    AA=C;DP=155     GT:GQ:DP        1|1:67:29       1|1:71:23       1|1:100:56
+13     106257195       rs53248 A       G       .       PASS    AA=G;DP=132     GT:GQ:DP        1|1:67:30       1|0:100:24      1|1:100:37
+19     2386456 rs7257237       T       C       .       PASS    AA=C;DP=106     GT:GQ:DP        1|1:67:30       1|1:55:18       1|1:100:60
+19     8153075 .       C       G       .       PASS    AA=C;DP=118     GT:GQ:DP        1|1:67:31       0|0:72:24       1|0:100:63
+13     81827032        rs9575090       T       C       .       PASS    AA=N;DP=102     GT:GQ:DP        1|1:67:31       0|1:100:18      1|0:100:53
+9      87158021        rs7019675       A       G       .       PASS    AA=G;DP=129     GT:GQ:DP        1|1:67:31       0|1:27:22       1|0:100:77
+3      43137297        rs6442138       A       G       .       PASS    AA=G;DP=126     GT:GQ:DP        1|1:67:31       0|1:86:26       1|0:100:72
+16     84926869        rs2581295       G       A       .       PASS    AA=A;DP=91      GT:GQ:DP        1|1:67:31       1|0:52:12       1|1:52:36
+20     1296426 rs6514339       T       G       .       PASS    AA=T;DP=150     GT:GQ:DP        1|1:67:32       0|0:44:26       1|0:100:93
+21     44441670        rs2032325       G       A       .       PASS    AA=G;DP=95      GT:GQ:DP        1|1:67:33       1|1:33:14       1|1:100:44
+6      8419034 rs6900007       C       T       .       PASS    AA=C;DP=117     GT:GQ:DP        1|1:67:34       0|1:65:18       1|0:100:65
+5      82544599        rs2731850       T       A       .       PASS    AA=A;DP=115     GT:GQ:DP        1|1:67:34       1|0:100:17      1|1:100:65
+7      46915310        rs7788655       T       A       .       PASS    AA=A;DP=120     GT:GQ:DP        1|1:67:34       1|0:100:19      1|1:100:69
+3      194998475       rs687610        C       G       .       PASS    AA=G;DP=135     GT:GQ:DP        1|1:67:34       1|0:78:20       1|1:100:76
+7      55385703        .       C       T       .       PASS    AA=C;DP=145     GT:GQ:DP        1|1:67:34       1|0:83:33       1|1:100:80
+8      16397494        rs1474448       T       C       .       PASS    AA=T;DP=130     GT:GQ:DP        1|1:67:35       0|1:100:26      1|0:100:71
+14     68507311        rs4899275       C       T       .       PASS    AA=T;DP=168     GT:GQ:DP        1|1:67:35       0|1:100:30      1|0:100:62
+7      46443746        rs141407        T       C       .       PASS    AA=C;DP=135     GT:GQ:DP        1|1:67:35       0|1:100:30      1|0:100:65
+16     63195260        rs62039887      C       A       .       PASS    AA=A;DP=109     GT:GQ:DP        1|1:68:21       1|1:100:32      1|1:100:55
+3      74324030        rs684392        T       G       .       PASS    AA=G;DP=105     GT:GQ:DP        1|1:68:21       1|1:100:33      1|1:100:49
+22     31494709        rs4821101       C       T       .       PASS    AA=C;DP=131     GT:GQ:DP        1|1:68:21       1|1:100:39      1|1:100:73
+17     735611  .       T       C       .       PASS    AA=t;DP=72      GT:GQ:DP        1|1:68:21       1|1:17:4        1|1:100:36
+21     43628249        rs2838292       G       A       .       PASS    AA=A;DP=92      GT:GQ:DP        1|1:68:21       1|1:18:9        1|1:100:63
+16     80360998        rs11150408      T       G       .       PASS    AA=G;DP=83      GT:GQ:DP        1|1:68:21       1|1:23:6        1|1:100:56
+12     83250579        rs11116316      A       T       .       PASS    AA=T;DP=93      GT:GQ:DP        1|1:68:21       1|1:24:17       1|1:99:41
+1      918383  rs35002855      A       G       .       PASS    AA=a;DP=74      GT:GQ:DP        1|1:68:21       1|1:29:10       1|1:100:34
+3      109482743       rs1563514       C       A       .       PASS    AA=A;DP=96      GT:GQ:DP        1|1:68:21       1|1:29:19       1|1:100:57
+6      135479079       rs1320959       T       C       .       PASS    AA=C;DP=79      GT:GQ:DP        1|1:68:21       1|1:29:8        1|1:100:52
+21     18655339        rs3787592       A       T       .       PASS    AA=T;DP=70      GT:GQ:DP        1|1:68:21       1|1:29:9        1|1:100:34
+18     49508871        rs2339766       T       C       .       PASS    AA=C;DP=104     GT:GQ:DP        1|1:68:21       1|1:32:14       1|1:100:68
+7      148258464       rs6979674       T       C       .       PASS    AA=C;DP=80      GT:GQ:DP        1|1:68:21       1|1:32:9        1|1:100:49
+7      1500039 rs2251226       A       G       .       PASS    AA=G;DP=95      GT:GQ:DP        1|1:68:21       1|1:32:9        1|1:100:65
+5      87958098        rs1628054       C       T       .       PASS    AA=T;DP=102     GT:GQ:DP        1|1:68:21       1|1:32:9        1|1:100:72
+14     77648802        rs177159        A       G       .       PASS    AA=G;DP=91      GT:GQ:DP        1|1:68:21       1|1:34:15       1|1:100:56
+3      67473975        rs6770689       C       T       .       PASS    AA=T;DP=87      GT:GQ:DP        1|1:68:21       1|1:35:10       1|1:100:57
+9      97355794        rs651742        G       C       .       PASS    AA=C;DP=108     GT:GQ:DP        1|1:68:21       1|1:35:10       1|1:100:76
+8      50354586        rs11786001      T       A       .       PASS    AA=.;DP=77      GT:GQ:DP        1|1:68:21       1|1:35:10       1|1:76:29
+2      33086806        rs449227        A       C       .       PASS    AA=C;DP=87      GT:GQ:DP        1|1:68:21       1|1:35:21       1|1:100:37
+7      11275313        rs2158373       A       G       .       PASS    AA=G;DP=127     GT:GQ:DP        1|1:68:21       1|1:35:21       1|1:100:85
+2      195455911       rs1377654       G       C       .       PASS    AA=N;DP=60      GT:GQ:DP        1|1:68:21       1|1:38:11       1|1:100:23
+8      59211894        rs4279582       G       A       .       PASS    AA=A;DP=91      GT:GQ:DP        1|1:68:21       1|1:38:11       1|1:100:60
+6      94818482        rs667243        A       G       .       PASS    AA=G;DP=90      GT:GQ:DP        1|1:68:21       1|1:38:18       1|1:100:51
+7      47918664        rs10231788      A       G       .       PASS    AA=G;DP=96      GT:GQ:DP        1|1:68:21       1|1:40:16       1|1:100:59
+16     84976323        rs1614087       T       C       .       PASS    AA=t;DP=65      GT:GQ:DP        1|1:68:21       1|1:41:12       1|1:100:27
+6      2679573 rs927712        T       A       .       PASS    AA=A;DP=90      GT:GQ:DP        1|1:68:21       1|1:41:12       1|1:100:55
+1      60635655        rs2937304       T       A       .       PASS    AA=T;DP=85      GT:GQ:DP        1|1:68:21       1|1:41:14       1|1:100:38
+5      76871129        rs3846673       A       G       .       PASS    AA=G;DP=111     GT:GQ:DP        1|1:68:21       1|1:41:27       1|1:100:64
+2      50129620        rs11125283      A       G       .       PASS    AA=G;DP=92      GT:GQ:DP        1|1:68:21       1|1:42:25       1|1:100:45
+4      74982938        rs551744        A       G       .       PASS    AA=G;DP=73      GT:GQ:DP        1|1:68:21       1|1:44:13       1|1:100:28
+3      6325270 rs1595043       A       G       .       PASS    AA=G;DP=73      GT:GQ:DP        1|1:68:21       1|1:44:14       1|1:100:29
+14     92849723        rs205336        C       T       .       PASS    AA=T;DP=81      GT:GQ:DP        1|1:68:21       1|1:44:14       1|1:100:47
+4      6404009 rs7663181       T       C       .       PASS    AA=T;DP=94      GT:GQ:DP        1|1:68:21       1|1:44:14       1|1:100:59
+7      76674536        rs887834        A       C       .       PASS    AA=T;DP=97      GT:GQ:DP        1|1:68:21       1|1:44:22       1|1:100:54
+9      1321991 rs1538720       A       C       .       PASS    AA=C;DP=91      GT:GQ:DP        1|1:68:21       1|1:46:19       1|1:100:48
+4      137105757       rs12511767      G       T       .       PASS    AA=T;DP=100     GT:GQ:DP        1|1:68:21       1|1:46:25       1|1:100:53
+4      27260893        rs297271        T       G       .       PASS    AA=G;DP=76      GT:GQ:DP        1|1:68:21       1|1:47:14       1|1:100:43
+5      5649528 rs2434254       G       A       .       PASS    AA=G;DP=94      GT:GQ:DP        1|1:68:21       1|1:47:14       1|1:100:59
+2      88933761        rs232183        T       C       .       PASS    AA=C;DP=110     GT:GQ:DP        1|1:68:21       1|1:47:14       1|1:100:77
+2      212798254       rs4580336       G       A       .       PASS    AA=A;DP=65      GT:GQ:DP        1|1:68:21       1|1:47:15       1|1:72:17
+11     34701048        rs836461        T       C       .       PASS    AA=C;DP=80      GT:GQ:DP        1|1:68:21       1|1:47:16       1|1:100:42
+4      8101914 rs1320061       T       C       .       PASS    AA=C;DP=78      GT:GQ:DP        1|1:68:21       1|1:47:16       1|1:100:43
+14     61669392        rs1892056       A       G       .       PASS    AA=A;DP=80      GT:GQ:DP        1|1:68:21       1|1:47:17       1|1:100:30
+1      237192028       rs9428792       G       A       .       PASS    AA=A;DP=107;HM2;HM3     GT:GQ:DP        1|1:68:21       1|1:48:24       1|1:100:63
+2      26097094        rs4665808       C       A       .       PASS    AA=A;DP=125     GT:GQ:DP        1|1:68:21       1|1:49:22       1|1:100:79
+6      162048217       rs13208989      T       C       .       PASS    AA=t;DP=74      GT:GQ:DP        1|1:68:21       1|1:50:15       1|1:100:32
+8      51870047        rs7820724       T       A       .       PASS    AA=A;DP=83      GT:GQ:DP        1|1:68:21       1|1:50:15       1|1:100:36
+16     59295373        rs1423887       G       C       .       PASS    AA=C;DP=79      GT:GQ:DP        1|1:68:21       1|1:50:15       1|1:100:46
+4      121280532       rs6534172       T       C       .       PASS    AA=C;DP=86      GT:GQ:DP        1|1:68:21       1|1:50:15       1|1:100:50
+8      6412728 rs2442550       G       C       .       PASS    AA=G;DP=111     GT:GQ:DP        1|1:68:21       1|1:50:15       1|1:100:63
+2      216780054       rs718601        T       C       .       PASS    AA=T;DP=108     GT:GQ:DP        1|1:68:21       1|1:50:15       1|1:100:72
+8      15471940        rs1529510       A       G       .       PASS    AA=G;DP=70      GT:GQ:DP        1|1:68:21       1|1:50:16       1|1:100:25
+18     617044  .       C       T       .       PASS    AA=C;DP=59      GT:GQ:DP        1|1:68:21       1|1:50:16       1|1:66:10
+13     107094624       rs4085952       T       C       .       PASS    AA=-;DP=104     GT:GQ:DP        1|1:68:21       1|1:51:31       1|1:100:52
+14     83316545        rs1958444       T       C       .       PASS    AA=C;DP=99      GT:GQ:DP        1|1:68:21       1|1:52:27       1|1:100:49
+4      177541062       rs6843096       G       A       .       PASS    AA=A;DP=72      GT:GQ:DP        1|1:68:21       1|1:53:16       1|1:100:23
+8      104009592       rs3018949       G       C       .       PASS    AA=T;DP=108     GT:GQ:DP        1|1:68:21       1|1:53:16       1|1:100:32
+5      85345334        rs13172392      T       C       .       PASS    AA=C;DP=86      GT:GQ:DP        1|1:68:21       1|1:53:16       1|1:100:49
+13     26171924        rs4390449       C       T       .       PASS    AA=T;DP=89      GT:GQ:DP        1|1:68:21       1|1:53:16       1|1:100:50
+3      122289285       rs3906000       C       T       .       PASS    AA=t;DP=85      GT:GQ:DP        1|1:68:21       1|1:53:16       1|1:100:50
+17     47551620        rs28872927      G       A       .       PASS    AA=A;DP=89      GT:GQ:DP        1|1:68:21       1|1:53:16       1|1:100:52
+4      47825303        rs16860999      A       G       .       PASS    AA=G;DP=90      GT:GQ:DP        1|1:68:21       1|1:53:16       1|1:100:52
+21     20912140        rs127744        A       T       .       PASS    AA=T;DP=90      GT:GQ:DP        1|1:68:21       1|1:53:16       1|1:100:54
+22     26283716        rs4822908       C       T       .       PASS    AA=T;DP=92      GT:GQ:DP        1|1:68:21       1|1:53:16       1|1:100:56
+13     20697667        rs7992703       G       A       .       PASS    AA=a;DP=97      GT:GQ:DP        1|1:68:21       1|1:53:16       1|1:100:58
+7      112067112       rs2952676       A       T       .       PASS    AA=T;DP=104     GT:GQ:DP        1|1:68:21       1|1:53:16       1|1:100:67
+2      8683185 rs10166364      G       C       .       PASS    AA=N;DP=110     GT:GQ:DP        1|1:68:21       1|1:53:17       1|1:100:72
+4      135259745       rs970036        G       A       .       PASS    AA=A;DP=92      GT:GQ:DP        1|1:68:21       1|1:53:24       1|1:100:48
+13     47013508        rs2503429       A       G       .       PASS    AA=A;DP=108     GT:GQ:DP        1|1:68:21       1|1:54:22       1|1:100:65
+5      109297634       rs36809 T       A       .       PASS    AA=t;DP=69      GT:GQ:DP        1|1:68:21       1|1:56:17       1|1:100:17
+3      151775461       rs7631671       T       C       .       PASS    AA=C;DP=117     GT:GQ:DP        1|1:68:21       1|1:56:17       1|1:100:35
+6      33582752        rs7383692       C       T       .       PASS    AA=T;DP=84      GT:GQ:DP        1|1:68:21       1|1:56:17       1|1:100:41
+12     30164228        rs4931262       T       C       .       PASS    AA=C;DP=85      GT:GQ:DP        1|1:68:21       1|1:56:17       1|1:100:47
+2      223692212       rs1545392       A       C       .       PASS    AA=C;DP=98      GT:GQ:DP        1|1:68:21       1|1:56:17       1|1:100:48
+3      54604684        rs9853840       G       C       .       PASS    AA=C;DP=89      GT:GQ:DP        1|1:68:21       1|1:56:17       1|1:100:51
+15     36213022        rs4923773       C       G       .       PASS    AA=G;DP=100     GT:GQ:DP        1|1:68:21       1|1:56:17       1|1:100:61
+1      102552894       rs7523854       A       T       .       PASS    AA=T;DP=99      GT:GQ:DP        1|1:68:21       1|1:56:17       1|1:100:62
+7      23615067        rs227921        T       G       .       PASS    AA=G;DP=104     GT:GQ:DP        1|1:68:21       1|1:56:17       1|1:100:67
+2      50168471        rs11125286      A       G       .       PASS    AA=G;DP=84      GT:GQ:DP        1|1:68:21       1|1:56:18       1|1:100:45
+13     99728428        rs9518039       T       A       .       PASS    AA=A;DP=89      GT:GQ:DP        1|1:68:21       1|1:56:18       1|1:100:48
+8      109296582       rs609102        A       G       .       PASS    AA=G;DP=92      GT:GQ:DP        1|1:68:21       1|1:56:18       1|1:100:54
+3      162796998       rs1605263       A       T       .       PASS    AA=T;DP=101     GT:GQ:DP        1|1:68:21       1|1:56:18       1|1:100:68
+6      95289350        rs222540        C       T       .       PASS    AA=T;DP=91      GT:GQ:DP        1|1:68:21       1|1:56:19       1|1:100:50
+9      73011829        rs7861992       T       C       .       PASS    AA=C;DP=107     GT:GQ:DP        1|1:68:21       1|1:56:19       1|1:100:66
+15     59410426        rs4326992       A       G       .       PASS    AA=-;DP=92      GT:GQ:DP        1|1:68:21       1|1:57:23       1|1:100:48
+2      2585308 rs10188704      G       A       .       PASS    AA=G;DP=102     GT:GQ:DP        1|1:68:21       1|1:58:24       1|1:100:55
+21     25363496        rs8130760       C       T       .       PASS    AA=T;DP=87      GT:GQ:DP        1|1:68:21       1|1:59:18       1|1:100:36
+21     23102485        rs2827713       C       T       .       PASS    AA=T;DP=93      GT:GQ:DP        1|1:68:21       1|1:59:18       1|1:100:58
+11     98536691        rs7110789       G       A       .       PASS    AA=A;DP=96      GT:GQ:DP        1|1:68:21       1|1:59:18       1|1:100:60
+9      33828475        rs2248910       T       C       .       PASS    AA=C;DP=106     GT:GQ:DP        1|1:68:21       1|1:59:18       1|1:100:70
+18     546501  rs612207        A       G       .       PASS    AA=A;DP=88      GT:GQ:DP        1|1:68:21       1|1:59:19       1|1:100:39
+8      40105124        rs7003414       C       T       .       PASS    AA=N;DP=99      GT:GQ:DP        1|1:68:21       1|1:59:19       1|1:100:59
+12     87222983        rs10858706      A       T       .       PASS    AA=A;DP=109     GT:GQ:DP        1|1:68:21       1|1:59:19       1|1:100:61
+10     91992092        rs699191        T       C       .       PASS    AA=T;DP=102     GT:GQ:DP        1|1:68:21       1|1:59:19       1|1:100:62
+5      162963024       rs159198        A       G       .       PASS    AA=G;DP=113     GT:GQ:DP        1|1:68:21       1|1:59:22       1|1:100:70
+12     57708351        rs1568303       G       A       .       PASS    AA=A;DP=107     GT:GQ:DP        1|1:68:21       1|1:59:25       1|1:100:60
+7      82063547        rs6467907       T       A       .       PASS    AA=A;DP=79      GT:GQ:DP        1|1:68:21       1|1:62:19       1|1:100:31
+10     2290348 rs7919154       T       C       .       PASS    AA=C;DP=80      GT:GQ:DP        1|1:68:21       1|1:62:19       1|1:100:34
+14     104668521       rs2735802       A       G       .       PASS    AA=G;DP=100     GT:GQ:DP        1|1:68:21       1|1:62:19       1|1:100:63
+8      81180753        rs6473200       T       C       .       PASS    AA=t;DP=104     GT:GQ:DP        1|1:68:21       1|1:62:19       1|1:100:63
+8      108482967       rs1283692       T       A       .       PASS    AA=A;DP=106     GT:GQ:DP        1|1:68:21       1|1:62:19       1|1:100:66
+1      210828787       rs3106402       C       T       .       PASS    AA=T;DP=107     GT:GQ:DP        1|1:68:21       1|1:62:19       1|1:100:70
+6      96602422        rs2031452       G       A       .       PASS    AA=A;DP=116     GT:GQ:DP        1|1:68:21       1|1:62:19       1|1:100:72
+1      43756729        rs11210862      C       T       .       PASS    AA=c;DP=91;HM2  GT:GQ:DP        1|1:68:21       1|1:62:20       1|1:100:50
+8      94110990        rs599731        A       C       .       PASS    AA=C;DP=114     GT:GQ:DP        1|1:68:21       1|1:62:30       1|1:100:65
+8      140197024       rs4736057       A       C       .       PASS    AA=C;DP=120     GT:GQ:DP        1|1:68:21       1|1:63:24       1|1:100:68
+13     108560602       rs157016        A       T       .       PASS    AA=T;DP=117     GT:GQ:DP        1|1:68:21       1|1:64:25       1|1:100:67
+4      73047819        rs6848431       C       A       .       PASS    AA=.;DP=83      GT:GQ:DP        1|1:68:21       1|1:65:20       1|1:100:42
+4      121375055       rs2715983       G       A       .       PASS    AA=A;DP=94      GT:GQ:DP        1|1:68:21       1|1:65:20       1|1:100:52
+14     21361950        rs8022648       G       A       .       PASS    AA=A;DP=102     GT:GQ:DP        1|1:68:21       1|1:65:20       1|1:100:62
+15     96982405        rs7165203       T       C       .       PASS    AA=C;DP=75      GT:GQ:DP        1|1:68:21       1|1:65:21       1|1:100:22
+9      109898644       rs1813421       G       A       .       PASS    AA=G;DP=100     GT:GQ:DP        1|1:68:21       1|1:65:24       1|1:100:54
+21     17493588        rs2776059       C       A       .       PASS    AA=A;DP=88      GT:GQ:DP        1|1:68:21       1|1:65:28       1|1:100:24
+13     83179288        rs2151508       T       C       .       PASS    AA=t;DP=131     GT:GQ:DP        1|1:68:21       1|1:65:36       1|1:100:76
+12     96796515        rs7980073       C       T       .       PASS    AA=T;DP=85      GT:GQ:DP        1|1:68:21       1|1:68:21       1|1:100:42
+1      72316615        rs2630423       G       A       .       PASS    AA=A;DP=96;HM2  GT:GQ:DP        1|1:68:21       1|1:68:21       1|1:100:51
+X      37902215        rs5918486       A       G       .       PASS    AA=a;DP=120     GT:GQ:DP        1|1:68:21       1|1:68:21       1|1:100:55
+6      65400548        rs7773891       T       C       .       PASS    AA=C;DP=113     GT:GQ:DP        1|1:68:21       1|1:68:21       1|1:100:56
+4      168176471       rs12644155      T       C       .       PASS    AA=T;DP=97      GT:GQ:DP        1|1:68:21       1|1:68:21       1|1:100:58
+6      16529642        rs1016222       A       G       .       PASS    AA=G;DP=100     GT:GQ:DP        1|1:68:21       1|1:68:21       1|1:100:58
+8      51022460        rs318877        C       T       .       PASS    AA=T;DP=103     GT:GQ:DP        1|1:68:21       1|1:68:21       1|1:100:62
+1      87795246        rs11162040      G       A       .       PASS    AA=A;DP=111;HM2 GT:GQ:DP        1|1:68:21       1|1:68:21       1|1:100:65
+17     68261147        rs891682        T       C       .       PASS    AA=T;DP=107     GT:GQ:DP        1|1:68:21       1|1:68:21       1|1:100:65
+14     84421071        rs856666        G       C       .       PASS    AA=C;DP=115     GT:GQ:DP        1|1:68:21       1|1:68:21       1|1:100:73
+4      159268898       rs6536299       A       G       .       PASS    AA=A;DP=92      GT:GQ:DP        1|1:68:21       1|1:68:22       1|1:100:48
+22     38044854        rs137625        A       G       .       PASS    AA=N;DP=99      GT:GQ:DP        1|1:68:21       1|1:68:22       1|1:100:55
+1      31276278        rs4949332       G       C       .       PASS    AA=C;DP=100;HM2 GT:GQ:DP        1|1:68:21       1|1:68:22       1|1:100:58
+14     75184665        rs11159149      T       C       .       PASS    AA=C;DP=108     GT:GQ:DP        1|1:68:21       1|1:68:22       1|1:100:65
+12     99298300        rs943403        A       G       .       PASS    AA=G;DP=95      GT:GQ:DP        1|1:68:21       1|1:68:23       1|1:100:54
+4      58470481        rs7678674       C       G       .       PASS    AA=G;DP=95      GT:GQ:DP        1|1:68:21       1|1:71:22       1|1:100:48
+18     37953900        rs635091        A       C       .       PASS    AA=A;DP=95      GT:GQ:DP        1|1:68:21       1|1:71:22       1|1:100:57
+2      164055834       rs1531446       A       G       .       PASS    AA=A;DP=96      GT:GQ:DP        1|1:68:21       1|1:71:23       1|1:100:53
+8      107127037       rs7460291       A       G       .       PASS    AA=G;DP=105     GT:GQ:DP        1|1:68:21       1|1:71:23       1|1:100:58
+12     125264327       rs2881446       C       T       .       PASS    AA=T;DP=119     GT:GQ:DP        1|1:68:21       1|1:71:23       1|1:100:74
+3      19917684        rs2929379       A       G       .       PASS    AA=a;DP=92      GT:GQ:DP        1|1:68:21       1|1:74:23       1|1:100:47
+3      87178853        rs2118076       T       G       .       PASS    AA=G;DP=96      GT:GQ:DP        1|1:68:21       1|1:74:23       1|1:100:50
+2      44303939        rs9973609       T       C       .       PASS    AA=C;DP=103     GT:GQ:DP        1|1:68:21       1|1:74:23       1|1:100:58
+X      38379058        rs6520518       G       A       .       PASS    AA=A;DP=120     GT:GQ:DP        1|1:68:21       1|1:74:24       1|1:100:41
+18     24850971        rs1941889       G       T       .       PASS    AA=T;DP=103     GT:GQ:DP        1|1:68:21       1|1:74:24       1|1:100:58
+2      192905663       rs2100064       T       C       .       PASS    AA=C;DP=105     GT:GQ:DP        1|1:68:21       1|1:74:24       1|1:100:60
+1      230343936       rs9725346       G       A       .       PASS    AA=A;DP=102;HM2;HM3     GT:GQ:DP        1|1:68:21       1|1:74:26       1|1:100:51
+17     33206244        rs35716147      T       C       .       PASS    AA=T;DP=117     GT:GQ:DP        1|1:68:21       1|1:74:26       1|1:100:73
+7      8206592 rs55875610      A       G       .       PASS    AA=G;DP=84      GT:GQ:DP        1|1:68:21       1|1:77:24       1|1:100:36
+22     46603507        rs5766895       G       C       .       PASS    AA=G;DP=102     GT:GQ:DP        1|1:68:21       1|1:77:24       1|1:100:58
+5      126409044       rs7722856       A       T       .       PASS    AA=T;DP=117     GT:GQ:DP        1|1:68:21       1|1:77:25       1|1:100:73
+8      17670143        rs6988030       A       G       .       PASS    AA=G;DP=92      GT:GQ:DP        1|1:68:21       1|1:80:25       1|1:100:48
+9      88798768        rs1927074       G       A       .       PASS    AA=G;DP=96      GT:GQ:DP        1|1:68:21       1|1:80:25       1|1:100:50
+20     47145816        rs2426128       A       G       .       PASS    AA=G;DP=107     GT:GQ:DP        1|1:68:21       1|1:80:26       1|1:100:60
+4      45888780        rs1440131       C       T       .       PASS    AA=C;DP=105     GT:GQ:DP        1|1:68:21       1|1:83:28       1|1:100:58
+X      21114443        rs9306762       C       T       .       PASS    AA=T;DP=135     GT:GQ:DP        1|1:68:21       1|1:83:32       1|1:100:46
+5      1998097 rs6860021       C       T       .       PASS    AA=T;DP=121     GT:GQ:DP        1|1:68:21       1|1:86:27       1|1:100:73
+4      143093922       rs6537090       C       T       .       PASS    AA=T;DP=94      GT:GQ:DP        1|1:68:21       1|1:86:28       1|1:100:45
+13     52154799        rs7330361       G       A       .       PASS    AA=A;DP=102     GT:GQ:DP        1|1:68:21       1|1:86:28       1|1:100:53
+4      146503329       rs6846386       G       A       .       PASS    AA=A;DP=135     GT:GQ:DP        1|1:68:21       1|1:86:30       1|1:100:77
+16     24407693        rs2548678       A       G       .       PASS    AA=G;DP=119     GT:GQ:DP        1|1:68:21       1|1:89:29       1|1:100:65
+5      27451196        rs2611392       A       G       .       PASS    AA=G;DP=112     GT:GQ:DP        1|1:68:21       1|1:92:32       1|1:100:61
+1      96417572        rs321578        A       T       .       PASS    AA=T;DP=103     GT:GQ:DP        1|1:68:21       1|1:95:30       1|1:100:51
+10     60095317        rs7920983       G       A       .       PASS    AA=A;DP=108     GT:GQ:DP        1|1:68:21       1|1:95:32       1|1:100:54
+12     85962586        rs6538058       T       G       .       PASS    AA=G;DP=105     GT:GQ:DP        1|1:68:21       1|1:98:31       1|1:100:52
+12     79267449        rs1037340       G       A       .       PASS    AA=G;DP=147     GT:GQ:DP        1|1:68:21       1|1:98:32       1|1:100:41
+8      30651537        rs10283288      T       A       .       PASS    AA=A;DP=144     GT:GQ:DP        1|1:68:22       1|1:100:35      1|1:100:91
+10     15345090        rs10906876      A       C       .       PASS    AA=C;DP=87      GT:GQ:DP        1|1:68:22       1|1:16:14       1|1:100:50
+8      11682056        rs2740438       T       G       .       PASS    AA=G;DP=79      GT:GQ:DP        1|1:68:22       1|1:17:11       1|1:100:45
+1      170746082       .       A       G       .       PASS    AA=G;DP=81      GT:GQ:DP        1|1:68:22       1|1:28:16       1|1:100:30
+8      14414204        rs2054358       C       A       .       PASS    AA=A;DP=98      GT:GQ:DP        1|1:68:22       1|1:28:16       1|1:85:19
+9      102732883       rs10760784      G       A       .       PASS    AA=A;DP=96      GT:GQ:DP        1|1:68:22       1|1:30:12       1|1:100:60
+2      114795837       rs7557999       T       C       .       PASS    AA=C;DP=90      GT:GQ:DP        1|1:68:22       1|1:31:14       1|1:100:55
+4      88927785        rs2169613       G       A       .       PASS    AA=A;DP=97      GT:GQ:DP        1|1:68:22       1|1:32:20       1|1:100:56
+2      126945275       rs6754762       T       G       .       PASS    AA=G;DP=108     GT:GQ:DP        1|1:68:22       1|1:32:20       1|1:100:66
+1      16215324        rs1763598       T       C       .       PASS    AA=t;DP=90      GT:GQ:DP        1|1:68:22       1|1:32:9        1|1:100:50
+2      63574410        rs10865337      C       T       .       PASS    AA=T;DP=59      GT:GQ:DP        1|1:68:22       1|1:32:9        1|1:89:19
+14     40960312        rs6572092       C       T       .       PASS    AA=T;DP=60      GT:GQ:DP        1|1:68:22       1|1:35:10       1|1:83:16
+3      83207006        rs7618699       C       A       .       PASS    AA=C;DP=76      GT:GQ:DP        1|1:68:22       1|1:41:12       1|1:100:34
+15     30068984        rs11071462      G       A       .       PASS    AA=A;DP=92      GT:GQ:DP        1|1:68:22       1|1:41:18       1|1:100:52
+13     101794714       rs1360974       A       G       .       PASS    AA=G;DP=103     GT:GQ:DP        1|1:68:22       1|1:41:23       1|1:100:58
+6      8867057 rs6597374       T       A       .       PASS    AA=A;DP=121     GT:GQ:DP        1|1:68:22       1|1:46:19       1|1:100:83
+20     57777517        rs2865767       A       C       .       PASS    AA=C;DP=92      GT:GQ:DP        1|1:68:22       1|1:47:14       1|1:100:55
+3      34680413        rs1402241       A       G       .       PASS    AA=G;DP=86      GT:GQ:DP        1|1:68:22       1|1:47:15       1|1:100:43
+15     23581201        rs1867510       T       C       .       PASS    AA=t;DP=91      GT:GQ:DP        1|1:68:22       1|1:50:15       1|1:100:45
+2      10663169        rs12692417      C       G       .       PASS    AA=G;DP=77      GT:GQ:DP        1|1:68:22       1|1:50:15       1|1:100:45
+21     46589103        rs2839215       A       G       .       PASS    AA=G;DP=102     GT:GQ:DP        1|1:68:22       1|1:50:16       1|1:100:62
+18     63064617        rs4243300       G       T       .       PASS    AA=G;DP=75      GT:GQ:DP        1|1:68:22       1|1:53:16       1|1:100:26
+17     66866039        rs6501478       G       T       .       PASS    AA=T;DP=93      GT:GQ:DP        1|1:68:22       1|1:53:16       1|1:100:57
+2      188362051       rs7589890       C       T       .       PASS    AA=t;DP=100     GT:GQ:DP        1|1:68:22       1|1:56:17       1|1:100:47
+15     51312707        rs10163018      C       T       .       PASS    AA=T;DP=89      GT:GQ:DP        1|1:68:22       1|1:56:17       1|1:100:53
+20     1008202 rs4813910       C       T       .       PASS    AA=N;DP=106     GT:GQ:DP        1|1:68:22       1|1:56:17       1|1:100:67
+3      168239856       rs7637238       G       A       .       PASS    AA=A;DP=77      GT:GQ:DP        1|1:68:22       1|1:56:18       1|1:100:30
+2      187312941       rs2122178       T       C       .       PASS    AA=C;DP=91      GT:GQ:DP        1|1:68:22       1|1:56:18       1|1:100:41
+8      73910653        rs1371779       C       T       .       PASS    AA=T;DP=104     GT:GQ:DP        1|1:68:22       1|1:56:19       1|1:100:63
+13     91172373        rs383194        A       G       .       PASS    AA=A;DP=100     GT:GQ:DP        1|1:68:22       1|1:59:18       1|1:100:62
+1      231639926       rs6658318       G       A       .       PASS    AA=A;DP=136;HM2 GT:GQ:DP        1|1:68:22       1|1:59:18       1|1:100:84
+14     70595707        rs4902875       C       A       .       PASS    AA=A;DP=130     GT:GQ:DP        1|1:68:22       1|1:59:18       1|1:100:91
+3      147035886       rs2037006       A       T       .       PASS    AA=T;DP=86      GT:GQ:DP        1|1:68:22       1|1:62:19       1|1:100:34
+5      128143452       rs247213        G       A       .       PASS    AA=A;DP=87      GT:GQ:DP        1|1:68:22       1|1:62:20       1|1:100:44
+16     8029700 rs12919813      A       G       .       PASS    AA=A;DP=96      GT:GQ:DP        1|1:68:22       1|1:62:20       1|1:100:53
+3      79867106        rs6548651       G       A       .       PASS    AA=A;DP=111     GT:GQ:DP        1|1:68:22       1|1:65:20       1|1:100:67
+14     66098338        rs10136957      G       A       .       PASS    AA=A;DP=97      GT:GQ:DP        1|1:68:22       1|1:65:21       1|1:100:54
+5      157871980       rs2946157       G       A       .       PASS    AA=G;DP=115     GT:GQ:DP        1|1:68:22       1|1:68:21       1|1:100:69
+6      68200408        rs6915897       A       G       .       PASS    AA=G;DP=87      GT:GQ:DP        1|1:68:22       1|1:68:22       1|1:100:34
+9      109121984       rs4978849       G       C       .       PASS    AA=C;DP=90      GT:GQ:DP        1|1:68:22       1|1:68:23       1|1:100:34
+11     20217723        rs7127481       A       G       .       PASS    AA=G;DP=86      GT:GQ:DP        1|1:68:22       1|1:71:22       1|1:100:32
+19     57829395        rs8106200       C       T       .       PASS    AA=c;DP=95      GT:GQ:DP        1|1:68:22       1|1:71:22       1|1:100:51
+7      113037047       rs2248494       A       C       .       PASS    AA=A;DP=110     GT:GQ:DP        1|1:68:22       1|1:71:22       1|1:100:64
+9      11420794        rs9406424       A       T       .       PASS    AA=T;DP=82      GT:GQ:DP        1|1:68:22       1|1:74:23       1|1:100:37
+19     20192590        rs1615967       G       A       .       PASS    AA=N;DP=99      GT:GQ:DP        1|1:68:22       1|1:77:26       1|1:100:41
+17     66121468        rs7221715       A       G       .       PASS    AA=A;DP=95      GT:GQ:DP        1|1:68:22       1|1:80:25       1|1:100:48
+12     38838469        rs716231        C       G       .       PASS    AA=C;DP=116     GT:GQ:DP        1|1:68:22       1|1:80:29       1|1:100:66
+1      177778398       rs1028902       C       T       .       PASS    AA=T;DP=110;HM2 GT:GQ:DP        1|1:68:22       1|1:83:27       1|1:100:61
+4      80145855        rs1480714       A       T       .       PASS    AA=A;DP=122     GT:GQ:DP        1|1:68:22       1|1:92:30       1|1:100:60
+5      121075890       rs343844        C       T       .       PASS    AA=t;DP=101     GT:GQ:DP        1|1:68:22       1|1:95:30       1|1:100:47
+4      161961234       rs10019347      A       G       .       PASS    AA=a;DP=103     GT:GQ:DP        1|1:68:22       1|1:98:32       1|1:100:51
+8      58638582        rs6471626       T       A       .       PASS    AA=A;DP=106     GT:GQ:DP        1|1:68:23       1|1:26:15       1|1:100:69
+11     45191453        rs11038356      T       C       .       PASS    AA=t;DP=93      GT:GQ:DP        1|1:68:23       1|1:29:9        1|1:100:53
+17     51129209        rs4794612       T       C       .       PASS    AA=C;DP=86      GT:GQ:DP        1|1:68:23       1|1:32:9        1|1:100:53
+15     62117611        rs433890        T       C       .       PASS    AA=C;DP=74      GT:GQ:DP        1|1:68:23       1|1:35:10       1|1:100:30
+19     1285728 rs6510602       G       A       .       PASS    AA=A;DP=92      GT:GQ:DP        1|1:68:23       1|1:36:16       1|1:100:55
+4      177918546       rs11727268      G       T       .       PASS    AA=G;DP=74      GT:GQ:DP        1|1:68:23       1|1:53:16       1|1:100:35
+4      19143788        rs4382033       T       C       .       PASS    AA=C;DP=93      GT:GQ:DP        1|1:68:23       1|1:53:16       1|1:100:54
+7      25225749        rs11764285      T       C       .       PASS    AA=T;DP=93      GT:GQ:DP        1|1:68:23       1|1:65:20       1|1:100:40
+8      81804757        rs1199042       C       T       .       PASS    AA=T;DP=124     GT:GQ:DP        1|1:68:23       1|1:83:29       1|1:100:69
+15     22943017        rs7497265       A       G       .       PASS    AA=G;DP=125     GT:GQ:DP        1|1:68:23       1|1:86:28       1|1:100:75
+4      7465269 rs6446598       A       T       .       PASS    AA=T;DP=94      GT:GQ:DP        1|1:68:24       1|1:14:13       1|1:100:59
+5      81723750        rs62367867      C       T       .       PASS    AA=T;DP=54      GT:GQ:DP        1|1:68:24       1|1:20:9        1|1:71:19
+20     41405442        rs2867690       T       C       .       PASS    AA=T;DP=102     GT:GQ:DP        1|1:68:24       1|1:59:19       1|1:100:59
+5      164425620       rs6879291       A       G       .       PASS    AA=G;DP=100     GT:GQ:DP        1|1:68:24       1|1:59:20       1|1:100:55
+3      125042419       rs2682239       T       C       .       PASS    AA=T;DP=92      GT:GQ:DP        1|1:68:24       1|1:68:22       1|1:100:37
+5      178188260       rs13185213      G       A       .       PASS    AA=A;DP=109     GT:GQ:DP        1|1:68:25       1|0:100:25      1|1:100:59
+8      11311881        rs7000625       A       T       .       PASS    AA=A;DP=96      GT:GQ:DP        1|1:68:25       1|1:41:19       1|1:100:44
+14     37637559        rs1959687       T       C       .       PASS    AA=C;DP=112     GT:GQ:DP        1|1:68:25       1|1:61:26       1|1:100:60
+9      86023982        rs945549        T       G       .       PASS    AA=G;DP=120     GT:GQ:DP        1|1:68:27       1|1:37:18       1|1:100:74
+2      234858970       rs4527191       A       G       .       PASS    AA=A;DP=95      GT:GQ:DP        1|1:68:27       1|1:53:16       1|1:100:51
+8      124159059       rs2385161       C       T       .       PASS    AA=T;DP=112     GT:GQ:DP        1|1:68:27       1|1:71:23       1|1:100:63
+5      35692702        rs1353255       G       T       .       PASS    AA=T;DP=127     GT:GQ:DP        1|1:68:27       1|1:74:23       1|1:100:78
+12     38999270        rs2162469       G       A       .       PASS    AA=A;DP=121     GT:GQ:DP        1|1:68:27       1|1:95:32       1|1:100:62
+17     45629623        rs11079898      T       C       .       PASS    AA=C;DP=115     GT:GQ:DP        1|1:68:29       0|0:12:18       1|0:100:66
+2      16117019        rs1365971       A       G       .       PASS    AA=G;DP=144     GT:GQ:DP        1|1:68:29       1|0:93:30       1|1:100:85
+20     60903586        rs2294983       T       C       .       PASS    AA=C;DP=115     GT:GQ:DP        1|1:68:29       1|1:44:15       1|1:100:75
+20     58115274        rs6027303       G       C       .       PASS    AA=C;DP=112     GT:GQ:DP        1|1:68:29       1|1:46:25       1|1:100:60
+10     124321635       rs2981800       G       T       .       PASS    AA=G;DP=132     GT:GQ:DP        1|1:68:29       1|1:74:26       1|1:100:79
+12     62785419        rs699627        C       G       .       PASS    AA=G;DP=122     GT:GQ:DP        1|1:68:29       1|1:91:35       1|1:100:58
+20     11558505        rs6109086       C       T       .       PASS    AA=T;DP=98      GT:GQ:DP        1|1:68:30       0|0:57:20       1|0:100:50
+2      23384973        rs6711889       C       T       .       PASS    AA=C;DP=127     GT:GQ:DP        1|1:68:30       0|1:100:23      1|0:100:75
+4      101358580       rs10032697      A       G       .       PASS    AA=A;DP=137     GT:GQ:DP        1|1:68:30       0|1:100:33      1|0:100:72
+12     96953775        rs7311034       G       T       .       PASS    AA=T;DP=120     GT:GQ:DP        1|1:68:30       0|1:54:23       1|0:100:67
+10     129627945       rs12570621      C       A       .       PASS    AA=A;DP=95      GT:GQ:DP        1|1:68:30       1|1:59:18       1|1:100:41
+8      53214793        rs5026058       G       C       .       PASS    AA=C;DP=100     GT:GQ:DP        1|1:68:30       1|1:68:21       1|1:100:48
+20     21121708        rs6132406       G       C       .       PASS    AA=G;DP=119     GT:GQ:DP        1|1:68:31       0|0:57:20       1|0:100:67
+7      104079308       rs2008042       C       T       .       PASS    AA=T;DP=145     GT:GQ:DP        1|1:68:31       1|1:83:27       1|1:100:85
+13     97604862        rs547200        A       C       .       PASS    AA=N;DP=149     GT:GQ:DP        1|1:68:32       0|1:100:33      1|0:100:46
+11     119160799       rs7936400       T       C       .       PASS    AA=t;DP=151     GT:GQ:DP        1|1:68:33       0|0:81:27       1|0:100:93
+5      178005241       rs4413550       T       G       .       PASS    AA=T;DP=138     GT:GQ:DP        1|1:68:33       1|0:64:22       1|1:100:83
+6      80850889        rs6454144       G       A       .       PASS    AA=A;DP=89      GT:GQ:DP        1|1:68:33       1|1:12:11       1|1:100:33
+X      127913668       rs1204087       A       C       .       PASS    AA=C;DP=146     GT:GQ:DP        1|1:68:33       1|1:52:27       1|1:100:45
+2      70490593        rs6546595       G       C       .       PASS    AA=G;DP=125     GT:GQ:DP        1|1:68:35       0|0:69:25       1|0:100:69
+11     123647921       rs7120833       A       T       .       PASS    AA=A;DP=138     GT:GQ:DP        1|1:68:36       0|0:47:24       1|0:100:79
+3      43014645        rs6806427       A       G       .       PASS    AA=G;DP=147     GT:GQ:DP        1|1:68:36       0|0:58:25       1|0:100:85
+2      144076740       rs4662209       C       A       .       PASS    AA=A;DP=132     GT:GQ:DP        1|1:68:36       0|0:72:24       1|0:100:72
+12     10921228        rs2110099       C       A       .       PASS    AA=C;DP=140     GT:GQ:DP        1|1:68:36       0|0:81:28       1|0:100:77
+7      9442411 rs62438771      T       G       .       PASS    AA=T;DP=147     GT:GQ:DP        1|1:68:37       0|0:48:18       1|0:100:45
+1      99017648        rs10875184      T       C       .       PASS    AA=C;DP=139;HM3 GT:GQ:DP        1|1:68:37       1|1:68:22       1|1:100:80
+5      130505914       rs10045911      T       G       .       PASS    AA=T;DP=123     GT:GQ:DP        1|1:68:39       1|0:100:25      1|1:100:59
+15     87113432        rs61536772      C       G       .       PASS    AA=G;DP=125     GT:GQ:DP        1|1:68:40       0|1:100:20      1|0:100:66
+13     27969001        rs664393        T       C       .       PASS    AA=N;DP=96      GT:GQ:DP        1|1:69:22       1|1:47:15       1|1:100:60
+14     90559858        rs7151354       G       A       .       PASS    AA=A;DP=81      GT:GQ:DP        1|1:69:23       1|0:100:15      1|1:90:30
+11     2923743 rs1519  C       G       .       PASS    AA=G;DP=75      GT:GQ:DP        1|1:69:23       1|0:100:19      1|1:78:26
+5      95299166        rs7700895       T       A       .       PASS    AA=A;DP=93      GT:GQ:DP        1|1:69:23       1|0:100:20      1|1:100:39
+10     20540716        rs12259741      G       A       .       PASS    AA=G;DP=96      GT:GQ:DP        1|1:69:23       1|0:100:20      1|1:100:53
+17     67430689        rs9907628       C       T       .       PASS    AA=T;DP=115     GT:GQ:DP        1|1:69:23       1|0:100:20      1|1:100:70
+13     25042163        rs7319477       G       A       .       PASS    AA=A;DP=80      GT:GQ:DP        1|1:69:23       1|0:100:21      1|1:100:36
+6      100648291       rs985936        G       A       .       PASS    AA=g;DP=114     GT:GQ:DP        1|1:69:23       1|0:100:21      1|1:100:70
+4      187389652       rs4241817       T       C       .       PASS    AA=T;DP=89      GT:GQ:DP        1|1:69:23       1|0:100:21      1|1:99:46
+7      142346826       rs11977017      T       C       .       PASS    AA=t;DP=101     GT:GQ:DP        1|1:69:23       1|0:100:22      1|1:100:46
+1      5115775 .       A       T       .       PASS    AA=A;DP=103     GT:GQ:DP        1|1:69:23       1|0:100:22      1|1:100:58
+10     84561856        rs1763060       A       G       .       PASS    AA=G;DP=111     GT:GQ:DP        1|1:69:23       1|0:100:22      1|1:100:67
+4      126134171       rs11939372      A       G       .       PASS    AA=A;DP=114     GT:GQ:DP        1|1:69:23       1|0:100:27      1|1:100:66
+2      57624288        rs10865302      A       T       .       PASS    AA=T;DP=110     GT:GQ:DP        1|1:69:23       1|0:100:28      1|1:100:63
+22     34427745        rs2285101       C       T       .       PASS    AA=c;DP=130     GT:GQ:DP        1|1:69:23       1|0:100:28      1|1:100:75
+7      80314856        rs12707036      C       A       .       PASS    AA=A;DP=128     GT:GQ:DP        1|1:69:23       1|0:100:29      1|1:100:74
+5      152405798       rs989587        T       C       .       PASS    AA=C;DP=132     GT:GQ:DP        1|1:69:23       1|0:100:30      1|1:100:64
+11     7486118 rs7949121       A       G       .       PASS    AA=A;DP=127     GT:GQ:DP        1|1:69:23       1|0:100:30      1|1:100:73
+19     13295769        rs10424173      A       G       .       PASS    AA=A;DP=122     GT:GQ:DP        1|1:69:23       1|0:100:39      1|1:89:58
+1      55190836        rs7530321       G       C       .       PASS    AA=G;DP=91;HM2;HM3      GT:GQ:DP        1|1:69:23       1|0:24:9        1|1:100:58
+16     82588456        rs8052260       C       T       .       PASS    AA=C;DP=101     GT:GQ:DP        1|1:69:23       1|0:26:9        1|1:100:69
+9      31828058        rs10813649      T       A       .       PASS    AA=T;DP=114     GT:GQ:DP        1|1:69:23       1|0:32:21       1|1:100:69
+6      33093813        rs9276996       T       C       .       PASS    AA=C;DP=102     GT:GQ:DP        1|1:69:23       1|0:47:10       1|1:100:72
+7      111582351       rs3997354       T       A       .       PASS    AA=A;DP=76      GT:GQ:DP        1|1:69:23       1|0:48:10       1|1:96:32
+9      72367323        rs7872938       G       A       .       PASS    AA=A;DP=94      GT:GQ:DP        1|1:69:23       1|0:50:15       1|1:100:56
+13     96781747        rs9584552       C       T       .       PASS    AA=T;DP=85      GT:GQ:DP        1|1:69:23       1|0:59:13       1|1:100:50
+6      149087930       rs6925573       A       T       .       PASS    AA=T;DP=84      GT:GQ:DP        1|1:69:23       1|0:65:14       1|1:70:36
+8      64847373        rs6995556       C       T       .       PASS    AA=T;DP=111     GT:GQ:DP        1|1:69:23       1|0:79:20       1|1:100:66
+1      88143585        rs6428570       C       T       .       PASS    AA=C;DP=100;HM2 GT:GQ:DP        1|1:69:23       1|0:82:23       1|1:100:54
+8      23514299        rs6992687       T       A       .       PASS    AA=T;DP=75      GT:GQ:DP        1|1:69:23       1|0:84:13       1|1:44:37
+1      203784233       rs7513290       A       G       .       PASS    AA=G;DP=98;HM2  GT:GQ:DP        1|1:69:23       1|0:84:19       1|1:100:57
+6      2613977 rs6916497       T       C       .       PASS    AA=C;DP=102     GT:GQ:DP        1|1:69:23       1|0:88:24       1|1:100:54
+12     118646582       rs4767841       G       A       .       PASS    AA=G;DP=103     GT:GQ:DP        1|1:69:23       1|0:89:18       1|1:100:67
+1      172652203       .       G       A       .       PASS    AA=G;DP=84      GT:GQ:DP        1|1:69:23       1|0:90:15       1|1:100:34
+7      38239830        rs6462820       A       G       .       PASS    AA=N;DP=92      GT:GQ:DP        1|1:69:23       1|0:92:19       1|1:99:33
+2      221965800       rs4674589       T       C       .       PASS    AA=T;DP=100     GT:GQ:DP        1|1:69:23       1|0:93:19       1|1:100:58
+17     65473501        rs8076266       C       T       .       PASS    AA=T;DP=112     GT:GQ:DP        1|1:69:23       1|0:95:34       1|1:100:46
+5      177960740       rs388749        T       C       .       PASS    AA=C;DP=107     GT:GQ:DP        1|1:69:23       1|0:96:19       1|1:100:67
+4      121086992       rs1420613       C       T       .       PASS    AA=T;DP=93      GT:GQ:DP        1|1:69:23       1|0:98:17       1|1:100:53
+12     92531813        rs10400450      T       G       .       PASS    AA=G;DP=97      GT:GQ:DP        1|1:69:23       1|0:99:23       1|1:100:51
+1      227436085       rs6676731       G       A       .       PASS    AA=A;DP=116;HM2 GT:GQ:DP        1|1:69:24       0|1:100:15      1|0:100:77
+11     64051540        rs2118002       T       C       .       PASS    AA=C;DP=99      GT:GQ:DP        1|1:69:24       0|1:100:16      1|0:100:59
+5      91100393        rs62366632      G       A       .       PASS    AA=G;DP=78      GT:GQ:DP        1|1:69:24       0|1:100:17      1|0:100:37
+10     125300194       rs705180        C       T       .       PASS    AA=T;DP=97      GT:GQ:DP        1|1:69:24       0|1:100:17      1|0:100:55
+7      94036597        rs2374740       G       A       .       PASS    AA=A;DP=102     GT:GQ:DP        1|1:69:24       0|1:100:17      1|0:100:61
+1      49101927        rs7520248       T       C       .       PASS    AA=T;DP=95;HM2  GT:GQ:DP        1|1:69:24       0|1:100:20      1|0:100:49
+18     54240096        rs4940689       A       G       .       PASS    AA=G;DP=110     GT:GQ:DP        1|1:69:24       0|1:100:20      1|0:100:66
+3      74702026        rs4676978       C       T       .       PASS    AA=C;DP=109     GT:GQ:DP        1|1:69:24       0|1:100:22      1|0:100:65
+14     38387645        rs1957054       A       G       .       PASS    AA=G;DP=104     GT:GQ:DP        1|1:69:24       0|1:100:24      1|0:100:48
+5      141701429       rs930892        G       T       .       PASS    AA=T;DP=135     GT:GQ:DP        1|1:69:24       0|1:100:25      1|0:100:88
+11     16839945        rs16933592      C       T       .       PASS    AA=C;DP=135     GT:GQ:DP        1|1:69:24       0|1:100:26      1|0:100:37
+6      95495470        rs9452911       C       A       .       PASS    AA=A;DP=104     GT:GQ:DP        1|1:69:24       0|1:100:26      1|0:100:54
+3      18778128        rs6550635       C       G       .       PASS    AA=G;DP=128     GT:GQ:DP        1|1:69:24       0|1:100:26      1|0:100:77
+16     50758247        rs1819840       T       A       .       PASS    AA=A;DP=128     GT:GQ:DP        1|1:69:24       0|1:100:27      1|0:100:77
+7      118023195       rs1208545       G       A       .       PASS    AA=G;DP=122     GT:GQ:DP        1|1:69:24       0|1:100:28      1|0:100:73
+12     21676048        rs4762857       T       C       .       PASS    AA=C;DP=109     GT:GQ:DP        1|1:69:24       0|1:100:29      1|0:100:56
+1      214108833       rs9804120       C       T       .       PASS    AA=T;DP=132;HM2 GT:GQ:DP        1|1:69:24       0|1:100:29      1|0:100:77
+6      158006900       rs625880        G       A       .       PASS    AA=A;DP=125     GT:GQ:DP        1|1:69:24       0|1:100:32      1|0:100:71
+11     94279331        rs562161        A       C       .       PASS    AA=C;DP=137     GT:GQ:DP        1|1:69:24       0|1:100:41      1|0:100:74
+4      184532040       rs55849612      G       A       .       PASS    AA=g;DP=102     GT:GQ:DP        1|1:69:24       0|1:17:22       1|0:100:55
+11     120742123       rs4936624       C       G       .       PASS    AA=G;DP=112     GT:GQ:DP        1|1:69:24       0|1:19:15       1|0:100:75
+22     43492586        rs6007260       A       G       .       PASS    AA=G;DP=113     GT:GQ:DP        1|1:69:24       0|1:26:14       1|0:100:75
+7      15107215        rs9648196       G       A       .       PASS    AA=A;DP=96      GT:GQ:DP        1|1:69:24       0|1:29:14       1|0:100:56
+3      118959170       rs7644030       T       G       .       PASS    AA=T;DP=109     GT:GQ:DP        1|1:69:24       0|1:30:21       1|0:100:69
+1      176126954       rs10798579      G       A       .       PASS    AA=G;DP=115     GT:GQ:DP        1|1:69:24       0|1:32:24       1|0:100:69
+17     66962653        rs4793348       C       T       .       PASS    AA=T;DP=120     GT:GQ:DP        1|1:69:24       0|1:46:23       1|0:100:77
+13     99419362        rs7329444       G       C       .       PASS    AA=C;DP=79      GT:GQ:DP        1|1:69:24       0|1:54:12       1|0:100:38
+10     68166291        rs7087253       T       A       .       PASS    AA=A;DP=76      GT:GQ:DP        1|1:69:24       0|1:54:9        1|0:100:43
+1      246383660       rs6699713       C       T       .       PASS    AA=t;DP=116;HM2 GT:GQ:DP        1|1:69:24       0|1:56:18       1|0:100:74
+16     11649351        rs8062315       C       G       .       PASS    AA=g;DP=94      GT:GQ:DP        1|1:69:24       0|1:60:15       1|0:100:56
+11     5496514 rs317777        A       G       .       PASS    AA=G;DP=106     GT:GQ:DP        1|1:69:24       0|1:63:12       1|0:100:70
+7      78493602        rs28572181      T       C       .       PASS    AA=C;DP=91      GT:GQ:DP        1|1:69:24       0|1:66:23       1|0:100:44
+10     129410411       rs2186044       C       T       .       PASS    AA=c;DP=121     GT:GQ:DP        1|1:69:24       0|1:67:23       1|0:100:74
+12     8988665 rs1805727       G       T       .       PASS    AA=T;DP=99      GT:GQ:DP        1|1:69:24       0|1:71:17       1|0:100:60
+7      144313998       rs2888147       G       T       .       PASS    AA=T;DP=94      GT:GQ:DP        1|1:69:24       0|1:73:19       1|0:100:50
+16     50674586        rs183744        G       A       .       PASS    AA=A;DP=100     GT:GQ:DP        1|1:69:24       0|1:73:25       1|0:100:51
+8      74240291        rs13255259      G       A       .       PASS    AA=A;DP=105     GT:GQ:DP        1|1:69:24       0|1:74:21       1|0:100:59
+4      37513613        rs2608309       G       A       .       PASS    AA=G;DP=117     GT:GQ:DP        1|1:69:24       0|1:77:17       1|0:100:78
+14     82260006        rs1152350       T       C       .       PASS    AA=C;DP=88      GT:GQ:DP        1|1:69:24       0|1:79:21       1|0:100:31
+14     31272428        rs7492643       T       C       .       PASS    AA=C;DP=91      GT:GQ:DP        1|1:69:24       0|1:84:17       1|0:100:50
+3      61947662        rs251037        T       C       .       PASS    AA=T;DP=80      GT:GQ:DP        1|1:69:24       0|1:88:20       1|0:100:24
+8      80042910        rs12682424      T       C       .       PASS    AA=C;DP=110     GT:GQ:DP        1|1:69:24       0|1:90:19       1|0:100:50
+7      19112692        rs757125        G       C       .       PASS    AA=C;DP=109     GT:GQ:DP        1|1:69:24       0|1:90:23       1|0:100:52
+21     24322481        rs2828717       G       T       .       PASS    AA=G;DP=122     GT:GQ:DP        1|1:69:24       0|1:91:28       1|0:100:71
+18     64882474        rs1544990       G       A       .       PASS    AA=A;DP=113     GT:GQ:DP        1|1:69:24       0|1:96:23       1|0:100:66
+4      33654980        rs13137908      A       G       .       PASS    AA=A;DP=97      GT:GQ:DP        1|1:69:24       1|0:100:18      1|1:100:54
+9      15878049        rs770212        G       A       .       PASS    AA=A;DP=106     GT:GQ:DP        1|1:69:24       1|0:100:18      1|1:100:67
+1      60408646        rs6675522       T       C       .       PASS    AA=N;DP=106;HM2 GT:GQ:DP        1|1:69:24       1|0:100:19      1|1:100:65
+8      3551652 rs17326685      A       G       .       PASS    AA=A;DP=97      GT:GQ:DP        1|1:69:24       1|0:100:20      1|1:100:50
+2      108133620       rs855007        C       T       .       PASS    AA=C;DP=116     GT:GQ:DP        1|1:69:24       1|0:100:22      1|1:100:72
+17     29521867        rs1078169       C       A       .       PASS    AA=A;DP=93      GT:GQ:DP        1|1:69:24       1|0:100:24      1|1:100:37
+5      118910613       rs11959717      A       G       .       PASS    AA=G;DP=117     GT:GQ:DP        1|1:69:24       1|0:100:25      1|1:100:68
+4      129568899       rs10021346      G       A       .       PASS    AA=A;DP=122     GT:GQ:DP        1|1:69:24       1|0:100:29      1|1:100:70
+1      119851258       rs932603        T       C       .       PASS    AA=C;DP=149;HM2;HM3     GT:GQ:DP        1|1:69:24       1|0:100:29      1|1:100:98
+7      133241477       rs10224683      G       A       .       PASS    AA=G;DP=132     GT:GQ:DP        1|1:69:24       1|0:100:35      1|1:100:58
+5      32087339        rs12516144      G       C       .       PASS    AA=G;DP=101     GT:GQ:DP        1|1:69:24       1|0:11:18       1|1:100:59
+19     54313776        rs2232003       T       C       .       PASS    AA=C;DP=113     GT:GQ:DP        1|1:69:24       1|0:68:16       1|1:100:73
+7      154266026       rs7785364       G       A       .       PASS    AA=A;DP=112     GT:GQ:DP        1|1:69:24       1|0:86:26       1|1:100:60
+1      174335538       rs2481637       T       C       .       PASS    AA=C;DP=104     GT:GQ:DP        1|1:69:24       1|0:93:11       1|1:100:73
+3      118056895       rs7613683       G       A       .       PASS    AA=A;DP=98      GT:GQ:DP        1|1:69:25       0|1:100:15      1|0:100:58
+12     83689023        rs1452248       C       G       .       PASS    AA=G;DP=90      GT:GQ:DP        1|1:69:25       0|1:100:18      1|0:100:35
+13     46441007        rs9285158       A       G       .       PASS    AA=N;DP=115     GT:GQ:DP        1|1:69:25       0|1:100:22      1|0:100:70
+19     58419972        rs7248781       C       T       .       PASS    AA=T;DP=115     GT:GQ:DP        1|1:69:25       0|1:100:24      1|0:100:64
+18     71930364        rs359745        T       C       .       PASS    AA=t;DP=125     GT:GQ:DP        1|1:69:25       0|1:100:24      1|0:100:78
+4      153705369       rs2054757       G       A       .       PASS    AA=G;DP=111     GT:GQ:DP        1|1:69:25       0|1:100:25      1|0:100:59
+1      189446754       rs1470935       A       T       .       PASS    AA=T;DP=132     GT:GQ:DP        1|1:69:25       0|1:100:27      1|0:100:83
+2      173763126       rs58407376      C       G       .       PASS    AA=C;DP=136     GT:GQ:DP        1|1:69:25       0|1:100:30      1|0:100:80
+4      78143055        rs2645662       G       A       .       PASS    AA=G;DP=145     GT:GQ:DP        1|1:69:25       0|1:100:31      1|0:100:87
+13     113609907       .       A       G       .       PASS    AA=N;DP=64      GT:GQ:DP        1|1:69:25       0|1:12:4        1|0:100:26
+8      37486984        rs7386303       T       C       .       PASS    AA=C;DP=91      GT:GQ:DP        1|1:69:25       0|1:53:13       1|0:100:53
+22     20724227        rs366116        T       C       .       PASS    AA=N;DP=122     GT:GQ:DP        1|1:69:25       0|1:54:20       1|0:100:76
+2      189791386       rs1356161       A       T       .       PASS    AA=A;DP=129     GT:GQ:DP        1|1:69:25       0|1:59:26       1|0:100:37
+7      77693346        rs6961674       C       G       .       PASS    AA=C;DP=87      GT:GQ:DP        1|1:69:25       0|1:60:17       1|0:100:45
+2      208217827       rs9751478       T       C       .       PASS    AA=T;DP=135     GT:GQ:DP        1|1:69:25       0|1:62:33       1|0:100:78
+2      208773676       rs10445799      C       T       .       PASS    AA=C;DP=85      GT:GQ:DP        1|1:69:25       0|1:74:15       1|0:100:32
+9      115233811       rs818716        C       T       .       PASS    AA=C;DP=85      GT:GQ:DP        1|1:69:25       0|1:75:14       1|0:100:39
+10     53566506        rs4935310       A       G       .       PASS    AA=A;DP=120     GT:GQ:DP        1|1:69:25       0|1:79:31       1|0:100:57
+5      53666034        rs10036139      C       T       .       PASS    AA=T;DP=121     GT:GQ:DP        1|1:69:25       0|1:81:13       1|0:100:66
+5      3352241 rs4242088       C       G       .       PASS    AA=G;DP=106     GT:GQ:DP        1|1:69:25       0|1:85:16       1|0:100:65
+2      109643133       rs10181171      G       A       .       PASS    AA=g;DP=93      GT:GQ:DP        1|1:69:25       0|1:95:11       1|0:100:47
+1      6991266 rs2275910       A       G       .       PASS    AA=G;DP=119     GT:GQ:DP        1|1:69:25       0|1:98:15       1|0:100:79
+2      31510796        rs11674100      G       A       .       PASS    AA=A;DP=106     GT:GQ:DP        1|1:69:25       0|1:98:22       1|0:100:55
+8      69639621        rs7814002       T       A       .       PASS    AA=N;DP=121     GT:GQ:DP        1|1:69:25       0|1:98:24       1|0:100:75
+10     56426097        rs10825424      A       C       .       PASS    AA=C;DP=117     GT:GQ:DP        1|1:69:25       0|1:99:30       1|0:100:64
+4      47532807        rs893863        G       A       .       PASS    AA=A;DP=115     GT:GQ:DP        1|1:69:25       1|0:100:27      1|1:100:66
+5      165857166       rs2964288       C       G       .       PASS    AA=G;DP=120     GT:GQ:DP        1|1:69:25       1|0:58:28       1|1:100:60
+11     107937963       rs2256372       T       C       .       PASS    AA=C;DP=111     GT:GQ:DP        1|1:69:25       1|0:93:24       1|1:100:64
+21     36552957        rs61015299      G       C       .       PASS    AA=G;DP=113     GT:GQ:DP        1|1:69:25       1|0:96:23       1|1:100:66
+3      167510963       rs635801        T       C       .       PASS    AA=T;DP=104     GT:GQ:DP        1|1:69:26       0|1:100:16      1|0:100:63
+17     2242261 rs7209918       G       C       .       PASS    AA=G;DP=127     GT:GQ:DP        1|1:69:26       0|1:100:18      1|0:100:85
+13     25670091        rs538626        C       T       .       PASS    AA=T;DP=104     GT:GQ:DP        1|1:69:26       0|1:100:19      1|0:100:56
+8      13696528        rs7017452       G       C       .       PASS    AA=C;DP=124     GT:GQ:DP        1|1:69:26       0|1:100:24      1|0:100:77
+5      134885421       rs6596235       G       A       .       PASS    AA=A;DP=127     GT:GQ:DP        1|1:69:26       0|1:100:27      1|0:100:31
+22     42711171        rs8418  A       G       .       PASS    AA=G;DP=88      GT:GQ:DP        1|1:69:26       0|1:53:19       1|0:100:34
+6      1244862 rs2317620       G       T       .       PASS    AA=T;DP=81      GT:GQ:DP        1|1:69:26       0|1:73:13       1|0:100:46
+8      20735575        rs6981033       A       G       .       PASS    AA=A;DP=116     GT:GQ:DP        1|1:69:26       0|1:89:23       1|0:100:68
+2      48108695        rs6545014       A       G       .       PASS    AA=A;DP=104     GT:GQ:DP        1|1:69:26       1|0:100:23      1|1:100:56
+1      82927169        rs405224        C       T       .       PASS    AA=C;DP=97;HM2  GT:GQ:DP        1|1:69:26       1|0:71:20       1|1:97:38
+9      15976795        rs2987024       A       G       .       PASS    AA=G;DP=113     GT:GQ:DP        1|1:69:26       1|0:82:31       1|1:100:57
+2      51903803        rs983511        A       G       .       PASS    AA=A;DP=118     GT:GQ:DP        1|1:69:26       1|1:98:31       1|1:100:62
+4      39910952        rs12506737      A       G       .       PASS    AA=A;DP=118     GT:GQ:DP        1|1:69:27       0|1:100:22      1|0:100:72
+12     131591968       rs11610659      C       T       .       PASS    AA=T;DP=93      GT:GQ:DP        1|1:69:27       0|1:40:16       1|0:76:41
+21     44615172        rs915778        C       T       .       PASS    AA=T;DP=101     GT:GQ:DP        1|1:69:27       1|1:26:12       1|1:100:63
+3      121419662       rs9811483       G       A       .       PASS    AA=A;DP=92      GT:GQ:DP        1|1:69:27       1|1:35:21       1|1:76:44
+5      82945055        rs1379267       G       T       .       PASS    AA=T;DP=119     GT:GQ:DP        1|1:69:28       0|0:32:20       1|0:100:71
+12     74477216        rs1275546       G       A       .       PASS    AA=G;DP=119     GT:GQ:DP        1|1:69:28       1|0:100:24      1|1:100:68
+2      235616558       rs3795962       A       G       .       PASS    AA=G;DP=120     GT:GQ:DP        1|1:69:28       1|1:56:17       1|1:100:76
+8      14573112        rs6996024       G       A       .       PASS    AA=A;DP=124     GT:GQ:DP        1|1:69:28       1|1:62:21       1|1:100:73
+5      111842217       rs6882162       A       G       .       PASS    AA=G;DP=102     GT:GQ:DP        1|1:69:29       1|0:100:19      1|1:100:45
+1      186634298       rs1602015       G       A       .       PASS    AA=G;DP=77      GT:GQ:DP        1|1:69:29       1|1:44:19       1|1:95:23
+2      124307881       rs6541926       A       C       .       PASS    AA=C;DP=108     GT:GQ:DP        1|1:69:29       1|1:52:27       1|1:100:43
+3      65026733        rs6445453       A       T       .       PASS    AA=A;DP=96      GT:GQ:DP        1|1:69:29       1|1:62:19       1|1:100:40
+14     45649173        rs1754317       A       C       .       PASS    AA=C;DP=107     GT:GQ:DP        1|1:69:29       1|1:77:26       1|1:100:42
+2      119770691       rs2860790       T       A       .       PASS    AA=A;DP=88      GT:GQ:DP        1|1:69:30       1|1:32:9        1|1:100:49
+7      1626850 rs10233876      A       C       .       PASS    AA=a;DP=111     GT:GQ:DP        1|1:69:30       1|1:38:11       1|1:100:71
+7      152777883       rs7804377       T       A       .       PASS    AA=A;DP=100     GT:GQ:DP        1|1:69:30       1|1:62:22       1|1:100:48
+2      191796839       rs1551439       A       C       .       PASS    AA=C;DP=119     GT:GQ:DP        1|1:69:30       1|1:95:31       1|1:100:58
+12     13993656        rs219923        T       G       .       PASS    AA=T;DP=107     GT:GQ:DP        1|1:69:31       0|0:48:16       1|0:100:59
+8      5360124 rs11783661      C       T       .       PASS    AA=T;DP=153     GT:GQ:DP        1|1:69:32       0|0:100:40      1|0:100:73
+8      126593864       .       T       G       .       PASS    AA=T;DP=127     GT:GQ:DP        1|1:69:32       0|0:56:28       1|0:100:62
+11     5381437 rs2647581       G       A       .       PASS    AA=A;DP=129     GT:GQ:DP        1|1:69:32       1|0:100:28      1|1:100:69
+8      75154675        rs16938783      T       C       .       PASS    AA=t;DP=135     GT:GQ:DP        1|1:69:32       1|0:100:36      1|1:100:69
+1      19228232        rs9426717       A       G       .       PASS    AA=G;DP=109     GT:GQ:DP        1|1:69:32       1|1:62:21       1|1:100:46
+20     16199083        rs4814465       T       C       .       PASS    AA=C;DP=115     GT:GQ:DP        1|1:69:32       1|1:74:24       1|1:100:55
+20     24204717        rs59723501      G       A       .       PASS    AA=N;DP=134     GT:GQ:DP        1|1:69:33       0|0:50:28       1|0:100:74
+13     91493823        .       G       A       .       PASS    AA=G;DP=128     GT:GQ:DP        1|1:69:33       0|1:100:29      1|0:100:66
+8      77630199        rs16939300      A       C       .       PASS    AA=C;DP=153     GT:GQ:DP        1|1:69:33       0|1:100:35      1|0:100:85
+3      157005889       rs6764439       C       T       .       PASS    AA=T;DP=119     GT:GQ:DP        1|1:69:33       0|1:88:22       1|0:100:65
+4      1333405 rs2276903       T       C       .       PASS    AA=C;DP=127     GT:GQ:DP        1|1:69:33       1|1:22:10       1|1:100:86
+14     66911331        rs12590065      T       C       .       PASS    AA=C;DP=105     GT:GQ:DP        1|1:69:33       1|1:39:15       1|1:100:42
+8      3939964 rs7830014       A       C       .       PASS    AA=a;DP=119     GT:GQ:DP        1|1:69:33       1|1:47:16       1|1:100:69
+6      30380396        rs261945        C       G       .       PASS    AA=.;DP=149     GT:GQ:DP        1|1:69:33       1|1:50:15       1|1:100:104
+10     114977685       rs7084455       A       G       .       PASS    AA=G;DP=120     GT:GQ:DP        1|1:69:33       1|1:65:20       1|1:100:68
+2      125989442       rs2016244       G       A       .       PASS    AA=A;DP=136     GT:GQ:DP        1|1:69:33       1|1:68:22       1|1:100:82
+12     66715386        rs7967588       T       G       .       PASS    AA=G;DP=163     GT:GQ:DP        1|1:69:33       1|1:70:31       1|1:100:102
+6      824613  rs7761619       A       C       .       PASS    AA=C;DP=108     GT:GQ:DP        1|1:69:33       1|1:74:23       1|1:100:50
+20     57797832        rs1182519       A       G       .       PASS    AA=A;DP=141     GT:GQ:DP        1|1:69:33       1|1:74:23       1|1:100:75
+16     24938538        rs6416625       A       G       .       PASS    AA=G;DP=111     GT:GQ:DP        1|1:69:33       1|1:74:24       1|1:100:53
+8      56550047        rs2975955       T       C       .       PASS    AA=C;DP=119     GT:GQ:DP        1|1:69:33       1|1:77:26       1|1:100:60
+3      17690528        rs6577616       C       T       .       PASS    AA=C;DP=128     GT:GQ:DP        1|1:69:33       1|1:83:26       1|1:100:72
+4      12408136        rs28399952      A       C       .       PASS    AA=C;DP=140     GT:GQ:DP        1|1:69:33       1|1:83:26       1|1:100:83
+9      120954309       rs57440 C       T       .       PASS    AA=T;DP=143     GT:GQ:DP        1|1:69:33       1|1:83:28       1|1:100:84
+3      198141169       rs1602  G       A       .       PASS    AA=A;DP=156     GT:GQ:DP        1|1:69:33       1|1:92:30       1|1:100:91
+1      88513373        rs536807        G       A       .       PASS    AA=A;DP=126;HM2;HM3     GT:GQ:DP        1|1:69:33       1|1:98:31       1|1:100:62
+11     13099119        rs57004297      A       G       .       PASS    AA=A;DP=126     GT:GQ:DP        1|1:69:34       0|0:66:23       1|0:100:61
+3      54092889        rs1449334       A       C       .       PASS    AA=C;DP=118     GT:GQ:DP        1|1:69:35       0|1:100:24      1|0:100:60
+17     12815272        rs7208362       C       A       .       PASS    AA=C;DP=112     GT:GQ:DP        1|1:69:35       1|1:45:20       1|1:100:56
+5      107160169       rs6868417       T       A       .       PASS    AA=A;DP=163     GT:GQ:DP        1|1:69:35       1|1:98:32       1|1:100:96
+14     73528314        rs7143207       T       A       .       PASS    AA=A;DP=91      GT:GQ:DP        1|1:69:36       0|0:36:12       1|0:100:34
+15     38190949        rs8024033       C       G       .       PASS    AA=G;DP=107     GT:GQ:DP        1|1:69:36       1|1:41:18       1|1:100:47
+20     60142483        rs6061438       T       C       .       PASS    AA=C;DP=137     GT:GQ:DP        1|1:69:37       1|1:50:19       1|1:100:81
+X      3984569 rs58676675      G       A       .       PASS    AA=G;DP=114     GT:GQ:DP        1|1:6:10        0|0:57:23       1|0:100:49
+X      137853309       rs660684        C       T       .       PASS    AA=T;DP=89      GT:GQ:DP        1|1:6:12        0|1:100:27      1|0:100:23
+X      20690042        rs5950370       C       T       .       PASS    AA=T;DP=75      GT:GQ:DP        1|1:6:14        0|1:30:10       1|0:100:27
+16     74480590        rs7191341       T       C       .       PASS    AA=C;DP=95      GT:GQ:DP        1|1:6:18        1|1:14:16       1|1:100:64
+X      78346943        .       A       G       .       PASS    AA=a;DP=65      GT:GQ:DP        1|1:6:3 0|0:51:18       1|0:100:21
+X      117164560       rs714749        G       A       .       PASS    AA=A;DP=101     GT:GQ:DP        1|1:6:3 0|0:81:27       1|0:100:37
+21     45750725        rs2838950       C       T       .       PASS    AA=C;DP=91      GT:GQ:DP        1|1:70:22       1|1:11:9        1|1:100:61
+4      169724185       rs11132332      G       A       .       PASS    AA=A;DP=92      GT:GQ:DP        1|1:70:23       1|1:15:14       1|1:100:49
+15     52212722        rs4774685       A       C       .       PASS    AA=a;DP=112     GT:GQ:DP        1|1:70:25       0|0:22:23       1|0:100:48
+10     92887190        .       T       G       .       PASS    AA=G;DP=96      GT:GQ:DP        1|1:70:25       0|0:39:13       1|0:100:58
+4      23517026        rs2946394       A       G       .       PASS    AA=A;DP=95      GT:GQ:DP        1|1:70:25       0|0:39:13       1|0:100:58
+9      29808666        rs7021350       T       C       .       PASS    AA=T;DP=107     GT:GQ:DP        1|1:70:25       0|0:39:13       1|0:100:70
+5      39288087        rs12653957      T       C       .       PASS    AA=T;DP=83      GT:GQ:DP        1|1:70:25       0|0:42:14       1|0:100:45
+4      166555832       rs11736871      T       C       .       PASS    AA=T;DP=101     GT:GQ:DP        1|1:70:25       0|0:42:15       1|0:100:62
+7      88659545        rs2708618       C       T       .       PASS    AA=C;DP=108     GT:GQ:DP        1|1:70:25       0|0:45:16       1|0:100:69
+5      6001370 rs59412155      C       T       .       PASS    AA=T;DP=92      GT:GQ:DP        1|1:70:25       0|0:48:17       1|0:100:43
+11     39720524        rs4756513       T       C       .       PASS    AA=T;DP=114     GT:GQ:DP        1|1:70:25       0|0:51:17       1|0:100:73
+19     22903349        rs10412106      A       G       .       PASS    AA=.;DP=108     GT:GQ:DP        1|1:70:25       0|0:54:18       1|0:100:64
+15     85278874        rs1368627       A       G       .       PASS    AA=G;DP=110     GT:GQ:DP        1|1:70:25       0|0:54:18       1|0:100:68
+11     15186846        rs10766213      A       G       .       PASS    AA=G;DP=100     GT:GQ:DP        1|1:70:25       0|0:54:19       1|0:100:47
+16     59635231        rs7189906       C       T       .       PASS    AA=C;DP=83      GT:GQ:DP        1|1:70:25       0|0:57:19       1|0:100:26
+12     124329077       rs10744199      G       A       .       PASS    AA=A;DP=88      GT:GQ:DP        1|1:70:25       0|0:57:19       1|0:100:43
+7      774739  rs4720931       A       G       .       PASS    AA=A;DP=94      GT:GQ:DP        1|1:70:25       0|0:57:19       1|0:100:43
+4      75892954        rs11097316      A       G       .       PASS    AA=G;DP=92      GT:GQ:DP        1|1:70:25       0|0:57:19       1|0:100:46
+3      169634244       rs13061313      C       T       .       PASS    AA=C;DP=91      GT:GQ:DP        1|1:70:25       0|0:60:20       1|0:100:48
+7      56635284        rs11977477      A       G       .       PASS    AA=a;DP=103     GT:GQ:DP        1|1:70:25       0|0:60:20       1|0:100:57
+2      167928544       .       T       C       .       PASS    AA=T;DP=138     GT:GQ:DP        1|1:70:25       0|0:60:22       1|0:100:44
+10     121752860       rs10886565      A       G       .       PASS    AA=a;DP=110     GT:GQ:DP        1|1:70:25       0|0:63:21       1|0:100:67
+11     86417252        rs4514445       A       G       .       PASS    AA=A;DP=99      GT:GQ:DP        1|1:70:25       0|0:66:22       1|0:100:52
+10     27437518        rs12784464      A       G       .       PASS    AA=G;DP=120     GT:GQ:DP        1|1:70:25       0|0:66:22       1|0:100:71
+6      152424610       rs6927127       T       C       .       PASS    AA=T;DP=104     GT:GQ:DP        1|1:70:25       0|0:66:25       1|0:100:55
+16     28538861        rs28410083      A       T       .       PASS    AA=.;DP=102     GT:GQ:DP        1|1:70:25       0|0:69:23       1|0:100:55
+10     73212845        rs10823844      T       C       .       PASS    AA=N;DP=123     GT:GQ:DP        1|1:70:25       0|0:69:24       1|0:100:74
+12     65417688        .       C       T       .       PASS    AA=C;DP=139     GT:GQ:DP        1|1:70:25       0|0:69:24       1|0:100:92
+8      73992909        rs13273799      A       G       .       PASS    AA=A;DP=117     GT:GQ:DP        1|1:70:25       0|0:70:28       1|0:100:65
+3      128155048       rs9790195       A       G       .       PASS    AA=G;DP=127     GT:GQ:DP        1|1:70:25       0|0:72:25       1|0:100:72
+10     132084837       rs7923478       G       A       .       PASS    AA=A;DP=140     GT:GQ:DP        1|1:70:25       0|0:72:26       1|0:100:45
+7      22945112        rs11974115      G       A       .       PASS    AA=A;DP=125     GT:GQ:DP        1|1:70:25       0|0:72:27       1|0:100:75
+20     52506294        rs6091884       T       A       .       PASS    AA=A;DP=91      GT:GQ:DP        1|1:70:25       0|0:75:26       1|0:100:40
+9      21359315        rs637949        C       G       .       PASS    AA=c;DP=128     GT:GQ:DP        1|1:70:25       0|0:76:31       1|0:100:73
+3      147754486       .       G       A       .       PASS    AA=G;DP=133     GT:GQ:DP        1|1:70:25       0|0:77:32       1|0:100:79
+12     15552491        rs1861595       A       T       .       PASS    AA=T;DP=139     GT:GQ:DP        1|1:70:25       0|0:78:26       1|0:100:89
+9      229667  rs12342533      G       A       .       PASS    AA=A;DP=107     GT:GQ:DP        1|1:70:25       0|0:78:27       1|0:100:57
+3      172398868       rs13317421      T       G       .       PASS    AA=G;DP=133     GT:GQ:DP        1|1:70:25       0|0:84:28       1|0:100:36
+14     59443048        rs35176212      T       C       .       PASS    AA=C;DP=146     GT:GQ:DP        1|1:70:25       0|0:84:28       1|0:100:81
+8      8341662 rs2921078       C       G       .       PASS    AA=C;DP=132     GT:GQ:DP        1|1:70:25       0|0:84:29       1|0:100:80
+3      23423787        rs778463        G       T       .       PASS    AA=G;DP=118     GT:GQ:DP        1|1:70:25       0|0:87:30       1|0:100:64
+12     43795380        rs12581554      A       G       .       PASS    AA=G;DP=103     GT:GQ:DP        1|1:70:25       0|0:90:30       1|0:100:50
+7      54222439        rs3867295       C       T       .       PASS    AA=C;DP=114     GT:GQ:DP        1|1:70:25       0|0:93:32       1|0:100:54
+10     98967145        .       T       C       .       PASS    AA=t;DP=104     GT:GQ:DP        1|1:70:25       0|0:96:32       1|0:100:46
+7      29562756        rs10215614      G       C       .       PASS    AA=G;DP=119     GT:GQ:DP        1|1:70:25       0|0:96:33       1|0:100:59
+16     16943069        rs4584801       G       A       .       PASS    AA=A;DP=117     GT:GQ:DP        1|1:70:25       0|0:96:34       1|0:100:57
+5      17730416        rs6879859       G       A       .       PASS    AA=G;DP=123     GT:GQ:DP        1|1:70:25       0|0:96:34       1|0:100:64
+3      172946708       rs1882254       A       G       .       PASS    AA=G;DP=94      GT:GQ:DP        1|1:70:26       0|0:10:15       1|0:100:42
+7      37288229        rs62459331      G       A       .       PASS    AA=N;DP=107     GT:GQ:DP        1|1:70:26       0|0:35:17       1|0:100:65
+5      176879759       rs337388        C       T       .       PASS    AA=C;DP=97      GT:GQ:DP        1|1:70:26       0|0:36:14       1|0:100:45
+2      101316202       rs1972163       A       G       .       PASS    AA=G;DP=87      GT:GQ:DP        1|1:70:26       0|0:45:16       1|0:100:46
+7      952366  rs7811408       G       A       .       PASS    AA=A;DP=120     GT:GQ:DP        1|1:70:26       0|0:48:20       1|0:100:75
+8      12763108        .       C       T       .       PASS    AA=c;DP=106     GT:GQ:DP        1|1:70:26       0|0:54:18       1|0:100:62
+15     84093026        rs2614666       C       T       .       PASS    AA=C;DP=95      GT:GQ:DP        1|1:70:26       0|0:54:20       1|0:100:50
+10     129895061       rs12771650      C       T       .       PASS    AA=C;DP=102     GT:GQ:DP        1|1:70:26       0|0:57:20       1|0:100:55
+1      57221792        rs2796228       G       A       .       PASS    AA=g;DP=124;HM2 GT:GQ:DP        1|1:70:26       0|0:57:20       1|0:100:73
+7      144117880       rs2699468       C       A       .       PASS    AA=C;DP=123     GT:GQ:DP        1|1:70:26       0|0:60:22       1|0:100:77
+3      107309266       .       C       T       .       PASS    AA=C;DP=107     GT:GQ:DP        1|1:70:26       0|0:63:21       1|0:100:58
+7      117270378       rs2193263       A       T       .       PASS    AA=A;DP=103     GT:GQ:DP        1|1:70:26       0|0:63:22       1|0:100:56
+5      113017223       rs2162843       G       C       .       PASS    AA=G;DP=103     GT:GQ:DP        1|1:70:26       0|0:63:23       1|0:100:54
+17     40078992        .       T       A       .       PASS    AA=T;DP=132     GT:GQ:DP        1|1:70:26       0|0:66:22       1|0:100:88
+1      111897169       rs1539582       A       G       .       PASS    AA=G;DP=120;HM2;HM3     GT:GQ:DP        1|1:70:26       0|0:66:23       1|0:100:72
+14     78260865        .       G       A       .       PASS    AA=G;DP=117     GT:GQ:DP        1|1:70:26       0|0:75:25       1|0:100:68
+3      145511667       rs59921777      G       A       .       PASS    AA=G;DP=145     GT:GQ:DP        1|1:70:26       0|0:76:37       1|0:100:85
+2      230738655       rs1060759       A       G       .       PASS    AA=A;DP=95      GT:GQ:DP        1|1:70:26       0|0:81:28       1|0:100:41
+10     27537842        rs10829210      C       A       .       PASS    AA=A;DP=103     GT:GQ:DP        1|1:70:26       1|1:53:17       1|1:100:59
+1      101748916       rs263913        C       A       .       PASS    AA=A;DP=98;HM2;HM3      GT:GQ:DP        1|1:70:26       1|1:71:22       1|1:100:50
+20     7255816 rs721708        C       T       .       PASS    AA=T;DP=126     GT:GQ:DP        1|1:70:27       0|0:42:15       1|0:100:35
+1      221891765       rs36072692      A       G       .       PASS    AA=A;DP=118     GT:GQ:DP        1|1:70:27       0|0:48:22       1|0:100:69
+18     18375633        rs16968378      A       C       .       PASS    AA=A;DP=115     GT:GQ:DP        1|1:70:27       0|0:61:32       1|0:100:56
+9      111597734       rs12377510      T       C       .       PASS    AA=C;DP=123     GT:GQ:DP        1|1:70:27       0|0:69:23       1|0:100:74
+2      98956667        rs62154861      T       C       .       PASS    AA=C;DP=116     GT:GQ:DP        1|1:70:27       0|0:69:24       1|0:100:68
+1      211592523       rs1656023       T       C       .       PASS    AA=T;DP=129;HM2;HM3     GT:GQ:DP        1|1:70:27       0|0:72:24       1|0:100:34
+7      44279451        rs7457796       T       C       .       PASS    AA=C;DP=128     GT:GQ:DP        1|1:70:27       0|0:72:24       1|0:100:78
+15     52240085        rs7164107       G       A       .       PASS    AA=G;DP=99      GT:GQ:DP        1|1:70:27       0|0:87:30       1|0:100:42
+13     41654811        rs9525591       G       A       .       PASS    AA=A;DP=80      GT:GQ:DP        1|1:70:27       1|1:32:11       1|1:100:31
+13     44297110        rs57783101      G       T       .       PASS    AA=g;DP=126     GT:GQ:DP        1|1:70:28       0|0:42:22       1|0:100:78
+8      27390886        rs2741339       A       G       .       PASS    AA=G;DP=132     GT:GQ:DP        1|1:70:28       0|1:100:29      1|0:100:78
+11     83957510        rs6592191       A       G       .       PASS    AA=G;DP=119     GT:GQ:DP        1|1:70:28       1|1:66:26       1|1:100:66
+22     36130587        rs9610739       C       T       .       PASS    AA=C;DP=121     GT:GQ:DP        1|1:70:29       0|1:58:22       1|0:100:69
+1      206844679       rs946802        A       G       .       PASS    AA=G;DP=121;HM2 GT:GQ:DP        1|1:70:29       1|1:20:20       1|1:100:74
+21     38074463        rs858043        C       T       .       PASS    AA=T;DP=128     GT:GQ:DP        1|1:70:29       1|1:92:29       1|1:100:72
+4      37873463        rs4832750       G       T       .       PASS    AA=G;DP=150     GT:GQ:DP        1|1:70:31       0|0:47:27       1|0:100:47
+17     50566176        rs2529506       C       T       .       PASS    AA=T;DP=121     GT:GQ:DP        1|1:70:31       1|0:97:23       1|1:100:68
+4      82655062        rs9995886       T       G       .       PASS    AA=t;DP=141     GT:GQ:DP        1|1:70:32       1|1:100:32      1|1:100:81
+1      2108399 rs2503699       T       C       .       PASS    AA=C;DP=100;HM2 GT:GQ:DP        1|1:70:32       1|1:26:12       1|1:100:45
+19     18437484        rs2278238       T       C       .       PASS    AA=N;DP=124     GT:GQ:DP        1|1:70:32       1|1:35:10       1|1:100:84
+12     103051259       rs7310193       T       C       .       PASS    AA=C;DP=141     GT:GQ:DP        1|1:70:32       1|1:52:25       1|1:100:83
+2      217160623       rs4674098       A       G       .       PASS    AA=G;DP=124     GT:GQ:DP        1|1:70:32       1|1:92:29       1|1:100:62
+8      102201806       rs935465        T       C       .       PASS    AA=T;DP=128     GT:GQ:DP        1|1:70:33       0|0:60:21       1|0:100:36
+2      233408623       rs7558609       A       G       .       PASS    AA=G;DP=127     GT:GQ:DP        1|1:70:33       0|1:84:23       1|0:100:71
+3      33183015        rs11710911      G       A       .       PASS    AA=G;DP=131     GT:GQ:DP        1|1:70:34       0|0:42:16       1|0:100:82
+1      151580777       rs3006448       C       A       .       PASS    AA=A;DP=121;HM2;HM3     GT:GQ:DP        1|1:70:34       1|0:100:20      1|1:100:69
+2      85768055        .       G       A       .       PASS    AA=G;DP=109     GT:GQ:DP        1|1:70:34       1|1:62:19       1|1:100:44
+7      157138782       rs2530405       C       G       .       PASS    AA=G;DP=113     GT:GQ:DP        1|1:70:35       1|0:41:14       1|1:100:61
+8      102923459       rs1272384       C       G       .       PASS    AA=C;DP=131     GT:GQ:DP        1|1:70:36       0|1:88:26       1|0:100:68
+2      241470380       rs7355583       T       C       .       PASS    AA=N;DP=146     GT:GQ:DP        1|1:70:37       1|0:100:22      1|1:100:84
+17     14967166        rs2191114       C       T       .       PASS    AA=T;DP=117     GT:GQ:DP        1|1:70:37       1|1:50:17       1|1:100:62
+8      104076189       rs600667        C       A       .       PASS    AA=A;DP=170     GT:GQ:DP        1|1:70:38       1|1:87:30       1|1:100:103
+16     25542317        rs564635        A       C       .       PASS    AA=C;DP=172     GT:GQ:DP        1|1:70:38       1|1:98:43       1|1:100:91
+20     35682597        rs2224131       T       G       .       PASS    AA=G;DP=174     GT:GQ:DP        1|1:70:41       0|0:53:29       1|0:100:62
+6      112296405       rs2024832       T       G       .       PASS    AA=G;DP=127     GT:GQ:DP        1|1:71:22       1|1:100:34      1|1:100:73
+14     50421478        rs2095915       G       A       .       PASS    AA=G;DP=106     GT:GQ:DP        1|1:71:22       1|1:100:39      1|1:100:41
+8      13076925        rs9325875       C       T       .       PASS    AA=T;DP=66      GT:GQ:DP        1|1:71:22       1|1:16:14       1|1:82:31
+2      183696737       rs1473614       C       G       .       PASS    AA=G;DP=101     GT:GQ:DP        1|1:71:22       1|1:18:15       1|1:100:61
+8      112418233       rs7832693       T       C       .       PASS    AA=t;DP=91      GT:GQ:DP        1|1:71:22       1|1:21:16       1|1:100:49
+10     28418764        rs2997211       T       C       .       PASS    AA=C;DP=82      GT:GQ:DP        1|1:71:22       1|1:22:14       1|1:100:45
+4      189183433       rs6553137       T       G       .       PASS    AA=t;DP=83      GT:GQ:DP        1|1:71:22       1|1:23:11       1|1:100:50
+10     79216901        rs2812435       A       G       .       PASS    AA=G;DP=90      GT:GQ:DP        1|1:71:22       1|1:23:12       1|1:100:43
+12     27585170        rs530040        A       T       .       PASS    AA=T;DP=87      GT:GQ:DP        1|1:71:22       1|1:23:15       1|1:67:50
+12     20357782        rs10743362      T       A       .       PASS    AA=T;DP=71      GT:GQ:DP        1|1:71:22       1|1:25:13       1|1:100:37
+12     91832458        rs2264424       T       C       .       PASS    AA=C;DP=100     GT:GQ:DP        1|1:71:22       1|1:29:13       1|1:100:64
+7      52017750        rs426635        A       T       .       PASS    AA=T;DP=97      GT:GQ:DP        1|1:71:22       1|1:29:19       1|1:100:56
+10     6498172 rs7069388       A       T       .       PASS    AA=A;DP=104     GT:GQ:DP        1|1:71:22       1|1:31:24       1|1:100:49
+18     12251459        rs4797656       A       C       .       PASS    AA=C;DP=109     GT:GQ:DP        1|1:71:22       1|1:32:18       1|1:100:70
+19     19948749        rs4808225       A       C       .       PASS    AA=N;DP=86      GT:GQ:DP        1|1:71:22       1|1:32:20       1|1:100:46
+21     27355023        rs9305296       T       C       .       PASS    AA=C;DP=66      GT:GQ:DP        1|1:71:22       1|1:32:9        1|1:85:24
+7      55359819        rs1917769       T       A       .       PASS    AA=T;DP=89      GT:GQ:DP        1|1:71:22       1|1:35:10       1|1:100:54
+14     47459062        rs2480020       T       G       .       PASS    AA=G;DP=92      GT:GQ:DP        1|1:71:22       1|1:35:11       1|1:100:49
+8      49158855        rs58816127      C       G       .       PASS    AA=N;DP=100     GT:GQ:DP        1|1:71:22       1|1:35:11       1|1:100:62
+16     55730581        rs2399622       A       G       .       PASS    AA=A;DP=101     GT:GQ:DP        1|1:71:22       1|1:35:21       1|1:100:56
+16     6829843 rs11648323      T       G       .       PASS    AA=g;DP=92      GT:GQ:DP        1|1:71:22       1|1:37:20       1|1:100:51
+1      206365843       rs10863699      T       A       .       PASS    AA=T;DP=116;HM2;HM3     GT:GQ:DP        1|1:71:22       1|1:37:21       1|1:100:74
+21     27639946        rs456680        A       G       .       PASS    AA=G;DP=89      GT:GQ:DP        1|1:71:22       1|1:38:12       1|1:100:47
+8      17274612        rs6587036       T       C       .       PASS    AA=C;DP=85      GT:GQ:DP        1|1:71:22       1|1:38:12       1|1:100:52
+15     67995788        rs896669        G       A       .       PASS    AA=A;DP=94      GT:GQ:DP        1|1:71:22       1|1:38:12       1|1:100:62
+6      48104466        rs2753199       C       T       .       PASS    AA=T;DP=58      GT:GQ:DP        1|1:71:22       1|1:38:12       1|1:92:18
+4      24577294        rs7691941       G       A       .       PASS    AA=A;DP=107     GT:GQ:DP        1|1:71:22       1|1:40:20       1|1:100:65
+4      22081618        rs10938900      A       G       .       PASS    AA=G;DP=90      GT:GQ:DP        1|1:71:22       1|1:41:12       1|1:100:43
+9      88056603        rs12339816      C       T       .       PASS    AA=T;DP=91      GT:GQ:DP        1|1:71:22       1|1:41:12       1|1:100:59
+5      76823448        rs41105 G       C       .       PASS    AA=G;DP=109     GT:GQ:DP        1|1:71:22       1|1:41:12       1|1:100:75
+22     43212119        rs4430  T       C       .       PASS    AA=C;DP=91      GT:GQ:DP        1|1:71:22       1|1:41:13       1|1:100:41
+10     27690327        rs237561        T       C       .       PASS    AA=C;DP=99      GT:GQ:DP        1|1:71:22       1|1:41:14       1|1:100:64
+17     84782   rs8073847       A       G       .       PASS    AA=G;DP=104     GT:GQ:DP        1|1:71:22       1|1:41:17       1|1:100:63
+7      109249829       rs3114756       G       C       .       PASS    AA=C;DP=97      GT:GQ:DP        1|1:71:22       1|1:41:18       1|1:100:49
+6      57778987        rs4426992       T       G       .       PASS    AA=G;DP=112     GT:GQ:DP        1|1:71:22       1|1:41:22       1|1:100:65
+12     28252766        rs7956418       G       A       .       PASS    AA=G;DP=77      GT:GQ:DP        1|1:71:22       1|1:42:17       1|1:100:39
+3      191612282       rs9844654       T       A       .       PASS    AA=A;DP=72      GT:GQ:DP        1|1:71:22       1|1:43:20       1|1:100:21
+6      37137662        rs9296208       A       C       .       PASS    AA=A;DP=84      GT:GQ:DP        1|1:71:22       1|1:44:13       1|1:100:40
+1      195751956       rs7519686       G       C       .       PASS    AA=C;DP=78;HM2  GT:GQ:DP        1|1:71:22       1|1:44:13       1|1:100:42
+1      96742959        rs12749081      A       C       .       PASS    AA=A;DP=92      GT:GQ:DP        1|1:71:22       1|1:44:13       1|1:100:57
+2      138004016       rs1448906       T       G       .       PASS    AA=T;DP=100     GT:GQ:DP        1|1:71:22       1|1:44:13       1|1:100:59
+8      112063214       rs6415454       T       C       .       PASS    AA=C;DP=84      GT:GQ:DP        1|1:71:22       1|1:44:14       1|1:100:33
+2      1127672 rs28459150      T       C       .       PASS    AA=t;DP=90      GT:GQ:DP        1|1:71:22       1|1:44:14       1|1:100:44
+1      185141084       rs1569480       A       G       .       PASS    AA=a;DP=90;HM2  GT:GQ:DP        1|1:71:22       1|1:45:18       1|1:100:55
+15     27783136        rs11857983      T       A       .       PASS    AA=A;DP=81      GT:GQ:DP        1|1:71:22       1|1:45:21       1|1:100:35
+2      49592663        rs7559848       T       A       .       PASS    AA=T;DP=98      GT:GQ:DP        1|1:71:22       1|1:46:23       1|1:100:52
+7      51543281        rs6956941       T       C       .       PASS    AA=T;DP=99      GT:GQ:DP        1|1:71:22       1|1:46:24       1|1:100:54
+12     61076018        rs11174460      G       C       .       PASS    AA=C;DP=82      GT:GQ:DP        1|1:71:22       1|1:47:14       1|1:100:36
+4      82122073        rs7692381       A       G       .       PASS    AA=G;DP=87      GT:GQ:DP        1|1:71:22       1|1:47:14       1|1:100:41
+12     100641720       rs11082 C       T       .       PASS    AA=T;DP=81      GT:GQ:DP        1|1:71:22       1|1:47:14       1|1:100:45
+1      186821629       rs16829099      G       A       .       PASS    AA=A;DP=84;HM2  GT:GQ:DP        1|1:71:22       1|1:47:14       1|1:100:48
+5      99252919        rs2602957       G       T       .       PASS    AA=T;DP=87      GT:GQ:DP        1|1:71:22       1|1:47:14       1|1:100:53
+10     72238855        rs2688756       A       C       .       PASS    AA=C;DP=89      GT:GQ:DP        1|1:71:22       1|1:47:14       1|1:100:54
+3      133776765       rs9818117       C       T       .       PASS    AA=T;DP=92      GT:GQ:DP        1|1:71:22       1|1:47:14       1|1:100:54
+9      28012253        rs1197912       T       C       .       PASS    AA=C;DP=108     GT:GQ:DP        1|1:71:22       1|1:47:14       1|1:100:71
+13     108350185       rs9514938       T       C       .       PASS    AA=t;DP=91      GT:GQ:DP        1|1:71:22       1|1:47:15       1|1:100:53
+4      60276535        rs1507127       A       G       .       PASS    AA=G;DP=99      GT:GQ:DP        1|1:71:22       1|1:47:16       1|1:100:61
+1      112538441       rs1837507       A       C       .       PASS    AA=A;DP=77;HM2  GT:GQ:DP        1|1:71:22       1|1:49:21       1|1:100:25
+4      13662455        rs2867613       C       G       .       PASS    AA=G;DP=95      GT:GQ:DP        1|1:71:22       1|1:49:26       1|1:100:34
+8      108117174       rs2927135       G       A       .       PASS    AA=A;DP=74      GT:GQ:DP        1|1:71:22       1|1:50:15       1|1:100:26
+8      37847177        rs7820872       T       G       .       PASS    AA=T;DP=78      GT:GQ:DP        1|1:71:22       1|1:50:15       1|1:100:33
+5      105268563       rs13153178      A       T       .       PASS    AA=T;DP=79      GT:GQ:DP        1|1:71:22       1|1:50:15       1|1:100:41
+9      21430017        rs2383189       G       A       .       PASS    AA=a;DP=79      GT:GQ:DP        1|1:71:22       1|1:50:15       1|1:100:41
+8      114860437       rs1901696       G       A       .       PASS    AA=A;DP=78      GT:GQ:DP        1|1:71:22       1|1:50:15       1|1:100:42
+10     31605328        rs1314012       T       C       .       PASS    AA=C;DP=83      GT:GQ:DP        1|1:71:22       1|1:50:15       1|1:100:47
+5      7607315 rs7734088       G       A       .       PASS    AA=g;DP=89      GT:GQ:DP        1|1:71:22       1|1:50:15       1|1:100:53
+10     63745781        rs10740072      C       T       .       PASS    AA=T;DP=106     GT:GQ:DP        1|1:71:22       1|1:50:15       1|1:100:70
+4      157716807       rs10517645      C       G       .       PASS    AA=G;DP=75      GT:GQ:DP        1|1:71:22       1|1:50:16       1|1:100:31
+7      138755001       rs8137  G       T       .       PASS    AA=T;DP=97      GT:GQ:DP        1|1:71:22       1|1:50:16       1|1:100:61
+5      119248191       rs4481370       C       T       .       PASS    AA=T;DP=103     GT:GQ:DP        1|1:71:22       1|1:50:16       1|1:100:67
+1      71210688        rs847735        C       T       .       PASS    AA=T;DP=75      GT:GQ:DP        1|1:71:22       1|1:50:17       1|1:100:30
+10     68503391        rs2619653       C       T       .       PASS    AA=T;DP=86      GT:GQ:DP        1|1:71:22       1|1:50:17       1|1:100:48
+1      97521968        rs526645        G       A       .       PASS    AA=A;DP=99;HM2  GT:GQ:DP        1|1:71:22       1|1:50:18       1|1:100:60
+3      118003177       rs1157048       A       G       .       PASS    AA=G;DP=89      GT:GQ:DP        1|1:71:22       1|1:50:21       1|1:100:46
+5      21907618        rs7446282       G       A       .       PASS    AA=A;DP=97      GT:GQ:DP        1|1:71:22       1|1:51:21       1|1:100:55
+16     59031885        rs10852578      T       C       .       PASS    AA=T;DP=100     GT:GQ:DP        1|1:71:22       1|1:51:27       1|1:100:50
+8      53035223        rs10104454      C       A       .       PASS    AA=A;DP=118     GT:GQ:DP        1|1:71:22       1|1:51:30       1|1:100:67
+4      178257353       rs2583174       T       A       .       PASS    AA=T;DP=63      GT:GQ:DP        1|1:71:22       1|1:53:16       1|1:100:24
+13     89307306        rs6492458       T       G       .       PASS    AA=G;DP=83      GT:GQ:DP        1|1:71:22       1|1:53:16       1|1:100:46
+15     70083382        rs1545825       C       A       .       PASS    AA=A;DP=84      GT:GQ:DP        1|1:71:22       1|1:53:16       1|1:100:47
+1      91703021        rs567104        T       C       .       PASS    AA=N;DP=91      GT:GQ:DP        1|1:71:22       1|1:53:16       1|1:100:50
+2      21501457        rs7568314       C       A       .       PASS    AA=A;DP=95      GT:GQ:DP        1|1:71:22       1|1:53:16       1|1:100:56
+5      171000072       rs254871        A       C       .       PASS    AA=C;DP=96      GT:GQ:DP        1|1:71:22       1|1:53:16       1|1:100:56
+X      148366485       rs5936288       A       C       .       PASS    AA=A;DP=100     GT:GQ:DP        1|1:71:22       1|1:53:17       1|1:100:25
+3      79918061        rs9309836       C       G       .       PASS    AA=G;DP=63      GT:GQ:DP        1|1:71:22       1|1:53:17       1|1:95:14
+5      51813565        rs1424907       T       A       .       PASS    AA=T;DP=131     GT:GQ:DP        1|1:71:22       1|1:55:28       1|1:100:76
+3      144650062       rs61591068      A       C       .       PASS    AA=C;DP=106     GT:GQ:DP        1|1:71:22       1|1:55:30       1|1:100:55
+15     70973324        rs8029325       C       T       .       PASS    AA=T;DP=80      GT:GQ:DP        1|1:71:22       1|1:56:17       1|1:100:34
+5      45737934        rs7714273       C       A       .       PASS    AA=A;DP=74      GT:GQ:DP        1|1:71:22       1|1:56:17       1|1:100:35
+5      113804467       rs11951774      A       G       .       PASS    AA=G;DP=85      GT:GQ:DP        1|1:71:22       1|1:56:17       1|1:100:45
+2      148980143       rs12619515      T       G       .       PASS    AA=G;DP=98      GT:GQ:DP        1|1:71:22       1|1:56:17       1|1:100:52
+8      68852831        rs2623826       A       G       .       PASS    AA=G;DP=106     GT:GQ:DP        1|1:71:22       1|1:56:17       1|1:100:60
+1      18696767        rs4244376       T       C       .       PASS    AA=C;DP=103;HM2 GT:GQ:DP        1|1:71:22       1|1:56:17       1|1:100:64
+18     3988247 rs2315254       G       A       .       PASS    AA=A;DP=85      GT:GQ:DP        1|1:71:22       1|1:56:18       1|1:100:43
+4      177646084       rs177950        G       A       .       PASS    AA=A;DP=78      GT:GQ:DP        1|1:71:22       1|1:56:19       1|1:100:37
+4      34905745        rs2127854       G       A       .       PASS    AA=A;DP=110     GT:GQ:DP        1|1:71:22       1|1:56:19       1|1:100:70
+12     4392161 rs929710        A       G       .       PASS    AA=G;DP=118     GT:GQ:DP        1|1:71:22       1|1:56:23       1|1:100:75
+15     30184889        rs12898347      A       G       .       PASS    AA=N;DP=101     GT:GQ:DP        1|1:71:22       1|1:58:23       1|1:100:56
+12     75374483        rs6539464       T       C       .       PASS    AA=C;DP=121     GT:GQ:DP        1|1:71:22       1|1:58:29       1|1:100:69
+X      68658561        rs5937254       A       G       .       PASS    AA=a;DP=90      GT:GQ:DP        1|1:71:22       1|1:59:18       1|1:100:25
+10     28893868        rs332131        G       A       .       PASS    AA=A;DP=99      GT:GQ:DP        1|1:71:22       1|1:59:18       1|1:100:58
+14     79383063        rs2049826       A       C       .       PASS    AA=A;DP=98      GT:GQ:DP        1|1:71:22       1|1:59:18       1|1:100:58
+22     21260770        rs6002909       A       G       .       PASS    AA=G;DP=104     GT:GQ:DP        1|1:71:22       1|1:59:18       1|1:100:64
+8      28266532        rs6558057       G       C       .       PASS    AA=C;DP=79      GT:GQ:DP        1|1:71:22       1|1:59:19       1|1:100:33
+4      179209437       rs2378810       G       C       .       PASS    AA=C;DP=120     GT:GQ:DP        1|1:71:22       1|1:59:19       1|1:100:38
+2      176611222       rs847134        G       A       .       PASS    AA=A;DP=103     GT:GQ:DP        1|1:71:22       1|1:59:19       1|1:100:60
+13     27921199        rs4769600       T       C       .       PASS    AA=t;DP=120     GT:GQ:DP        1|1:71:22       1|1:59:20       1|1:100:75
+2      167670487       rs7557440       C       G       .       PASS    AA=c;DP=101     GT:GQ:DP        1|1:71:22       1|1:59:27       1|1:100:41
+1      61890800        rs1353427       C       A       .       PASS    AA=A;DP=112     GT:GQ:DP        1|1:71:22       1|1:60:30       1|1:100:61
+17     22781616        rs9899255       C       T       .       PASS    AA=N;DP=110     GT:GQ:DP        1|1:71:22       1|1:61:26       1|1:100:51
+7      64435187        rs4718230       C       T       .       PASS    AA=.;DP=94      GT:GQ:DP        1|1:71:22       1|1:62:19       1|1:100:53
+2      47305332        rs12612040      G       C       .       PASS    AA=C;DP=98      GT:GQ:DP        1|1:71:22       1|1:62:19       1|1:100:58
+18     56297034        rs1344736       A       G       .       PASS    AA=a;DP=99      GT:GQ:DP        1|1:71:22       1|1:62:19       1|1:100:59
+2      45723484        rs558368        T       A       .       PASS    AA=T;DP=139     GT:GQ:DP        1|1:71:22       1|1:62:20       1|1:100:51
+3      183901066       rs3108740       C       T       .       PASS    AA=T;DP=103     GT:GQ:DP        1|1:71:22       1|1:62:20       1|1:100:60
+14     97509237        rs1466439       T       C       .       PASS    AA=C;DP=103     GT:GQ:DP        1|1:71:22       1|1:62:20       1|1:100:61
+3      164622697       rs2612729       C       T       .       PASS    AA=T;DP=112     GT:GQ:DP        1|1:71:22       1|1:62:20       1|1:100:69
+1      178712013       rs7543143       T       C       .       PASS    AA=C;DP=110     GT:GQ:DP        1|1:71:22       1|1:62:21       1|1:100:66
+13     77752221        rs1360045       G       A       .       PASS    AA=G;DP=86      GT:GQ:DP        1|1:71:22       1|1:65:20       1|1:100:32
+3      53677493        rs898418        C       T       .       PASS    AA=N;DP=92      GT:GQ:DP        1|1:71:22       1|1:65:20       1|1:100:40
+2      148763597       rs9653191       T       C       .       PASS    AA=T;DP=98      GT:GQ:DP        1|1:71:22       1|1:65:20       1|1:100:52
+8      4529900 rs10866976      A       C       .       PASS    AA=A;DP=92      GT:GQ:DP        1|1:71:22       1|1:65:20       1|1:100:52
+6      141557692       rs1823786       T       C       .       PASS    AA=t;DP=112     GT:GQ:DP        1|1:71:22       1|1:65:20       1|1:100:69
+4      156645734       rs10213478      C       T       .       PASS    AA=T;DP=76      GT:GQ:DP        1|1:71:22       1|1:65:21       1|1:100:21
+5      31335202        rs2962800       G       A       .       PASS    AA=A;DP=89      GT:GQ:DP        1|1:71:22       1|1:65:21       1|1:100:44
+6      49436173        rs562077        A       G       .       PASS    AA=a;DP=112     GT:GQ:DP        1|1:71:22       1|1:65:21       1|1:100:45
+5      3671258 rs1530501       A       G       .       PASS    AA=G;DP=95      GT:GQ:DP        1|1:71:22       1|1:65:21       1|1:100:52
+16     72424503        rs425594        T       C       .       PASS    AA=C;DP=99      GT:GQ:DP        1|1:71:22       1|1:65:21       1|1:100:56
+14     71735071        rs4902997       G       A       .       PASS    AA=A;DP=103     GT:GQ:DP        1|1:71:22       1|1:65:21       1|1:100:61
+11     132619294       rs7931579       G       C       .       PASS    AA=C;DP=116     GT:GQ:DP        1|1:71:22       1|1:65:21       1|1:100:70
+8      31311856        rs11781288      C       G       .       PASS    AA=G;DP=119     GT:GQ:DP        1|1:71:22       1|1:66:21       1|1:100:73
+7      12337544        rs3815534       A       T       .       PASS    AA=A;DP=118     GT:GQ:DP        1|1:71:22       1|1:66:27       1|1:100:66
+10     103297491       rs9419929       A       T       .       PASS    AA=A;DP=80      GT:GQ:DP        1|1:71:22       1|1:68:21       1|1:100:32
+8      109531967       rs4540386       A       G       .       PASS    AA=A;DP=87      GT:GQ:DP        1|1:71:22       1|1:68:21       1|1:100:45
+6      80063941        rs6941333       A       T       .       PASS    AA=T;DP=94      GT:GQ:DP        1|1:71:22       1|1:68:21       1|1:100:54
+2      71783566        rs934068        G       A       .       PASS    AA=A;DP=105     GT:GQ:DP        1|1:71:22       1|1:68:21       1|1:100:56
+21     15304019        rs1018353       C       T       .       PASS    AA=T;DP=99      GT:GQ:DP        1|1:71:22       1|1:68:22       1|1:100:56
+14     62054732        rs2000251       G       T       .       PASS    AA=T;DP=110     GT:GQ:DP        1|1:71:22       1|1:68:22       1|1:100:62
+14     45400229        rs400784        G       C       .       PASS    AA=C;DP=94      GT:GQ:DP        1|1:71:22       1|1:68:25       1|1:100:47
+14     87337048        rs1770545       C       G       .       PASS    AA=G;DP=113     GT:GQ:DP        1|1:71:22       1|1:68:25       1|1:100:65
+9      36575988        rs7046277       T       C       .       PASS    AA=C;DP=115     GT:GQ:DP        1|1:71:22       1|1:69:30       1|1:100:64
+2      194722850       rs6749282       T       G       .       PASS    AA=T;DP=103     GT:GQ:DP        1|1:71:22       1|1:71:22       1|1:100:49
+2      8874610 rs7581727       C       T       .       PASS    AA=T;DP=95      GT:GQ:DP        1|1:71:22       1|1:71:22       1|1:100:53
+2      57126158        rs1429311       C       A       .       PASS    AA=A;DP=101     GT:GQ:DP        1|1:71:22       1|1:71:22       1|1:100:54
+10     109636704       rs4608001       G       A       .       PASS    AA=A;DP=101     GT:GQ:DP        1|1:71:22       1|1:71:22       1|1:100:57
+6      76821058        rs2794292       G       A       .       PASS    AA=A;DP=118     GT:GQ:DP        1|1:71:22       1|1:71:22       1|1:100:61
+13     70781346        rs4883891       T       A       .       PASS    AA=A;DP=104     GT:GQ:DP        1|1:71:22       1|1:71:22       1|1:100:62
+12     76154559        rs7307337       G       T       .       PASS    AA=T;DP=118     GT:GQ:DP        1|1:71:22       1|1:71:22       1|1:100:68
+8      51948509        rs10958152      C       G       .       PASS    AA=G;DP=100     GT:GQ:DP        1|1:71:22       1|1:71:23       1|1:100:48
+14     32112436        rs8016916       A       G       .       PASS    AA=G;DP=96      GT:GQ:DP        1|1:71:22       1|1:71:23       1|1:100:52
+7      137886183       rs1363053       G       C       .       PASS    AA=C;DP=106     GT:GQ:DP        1|1:71:22       1|1:71:23       1|1:100:58
+6      49492007        rs6921413       A       G       .       PASS    AA=G;DP=115     GT:GQ:DP        1|1:71:22       1|1:72:28       1|1:100:65
+10     19673972        rs3922505       A       T       .       PASS    AA=T;DP=90      GT:GQ:DP        1|1:71:22       1|1:74:23       1|1:100:32
+4      72841267        rs222033        A       C       .       PASS    AA=C;DP=101     GT:GQ:DP        1|1:71:22       1|1:74:23       1|1:100:58
+18     35896883        rs307078        A       G       .       PASS    AA=G;DP=106     GT:GQ:DP        1|1:71:22       1|1:74:23       1|1:100:61
+6      87139862        rs6919092       A       T       .       PASS    AA=.;DP=113     GT:GQ:DP        1|1:71:22       1|1:74:23       1|1:100:68
+8      14882160        rs7010925       G       A       .       PASS    AA=A;DP=116     GT:GQ:DP        1|1:71:22       1|1:74:23       1|1:100:75
+21     29021276        rs2409318       T       C       .       PASS    AA=C;DP=128     GT:GQ:DP        1|1:71:22       1|1:74:23       1|1:100:81
+2      184440836       rs826172        C       T       .       PASS    AA=T;DP=97      GT:GQ:DP        1|1:71:22       1|1:74:24       1|1:100:41
+1      61792865        rs1933313       C       G       .       PASS    AA=G;DP=120;HM2 GT:GQ:DP        1|1:71:22       1|1:74:24       1|1:100:74
+1      107620348       rs4550083       A       G       .       PASS    AA=G;DP=128;HM2 GT:GQ:DP        1|1:71:22       1|1:74:24       1|1:100:82
+9      1987594 rs10115271      T       G       .       PASS    AA=G;DP=125     GT:GQ:DP        1|1:71:22       1|1:76:34       1|1:100:67
+22     46681861        rs2879203       G       A       .       PASS    AA=A;DP=93      GT:GQ:DP        1|1:71:22       1|1:77:24       1|1:100:37
+6      19502112        rs2220938       T       C       .       PASS    AA=T;DP=92      GT:GQ:DP        1|1:71:22       1|1:77:24       1|1:100:50
+2      76801337        rs4624403       C       G       .       PASS    AA=N;DP=97      GT:GQ:DP        1|1:71:22       1|1:77:24       1|1:100:51
+1      78312826        rs684579        G       A       .       PASS    AA=A;DP=109     GT:GQ:DP        1|1:71:22       1|1:77:24       1|1:100:62
+19     34093535        rs979629        G       C       .       PASS    AA=C;DP=114     GT:GQ:DP        1|1:71:22       1|1:77:24       1|1:100:64
+12     78450289        rs7310151       C       T       .       PASS    AA=T;DP=115     GT:GQ:DP        1|1:71:22       1|1:77:24       1|1:100:68
+7      9972517 rs2971032       C       T       .       PASS    AA=T;DP=115     GT:GQ:DP        1|1:71:22       1|1:77:24       1|1:100:68
+4      19675421        rs6447938       C       A       .       PASS    AA=a;DP=99      GT:GQ:DP        1|1:71:22       1|1:77:25       1|1:100:41
+3      74982900        rs6549665       G       C       .       PASS    AA=C;DP=118     GT:GQ:DP        1|1:71:22       1|1:77:25       1|1:100:70
+6      65534516        rs1390278       T       C       .       PASS    AA=C;DP=125     GT:GQ:DP        1|1:71:22       1|1:77:25       1|1:100:78
+3      196915805       rs3107771       A       G       .       PASS    AA=N;DP=140     GT:GQ:DP        1|1:71:22       1|1:79:41       1|1:100:78
+3      6595075 rs1622256       T       G       .       PASS    AA=g;DP=83      GT:GQ:DP        1|1:71:22       1|1:80:25       1|1:100:27
+8      4194248 rs7009827       C       G       .       PASS    AA=G;DP=102     GT:GQ:DP        1|1:71:22       1|1:80:25       1|1:100:58
+16     7141295 rs2127066       G       A       .       PASS    AA=A;DP=119     GT:GQ:DP        1|1:71:22       1|1:80:25       1|1:100:69
+3      145034512       rs4839671       C       T       .       PASS    AA=T;DP=119     GT:GQ:DP        1|1:71:22       1|1:80:25       1|1:100:70
+7      147356296       rs4571659       G       A       .       PASS    AA=A;DP=121     GT:GQ:DP        1|1:71:22       1|1:80:25       1|1:100:75
+3      166458124       rs6443913       C       T       .       PASS    AA=T;DP=91      GT:GQ:DP        1|1:71:22       1|1:80:26       1|1:100:43
+1      222978927       rs892976        G       T       .       PASS    AA=T;DP=98      GT:GQ:DP        1|1:71:22       1|1:83:26       1|1:100:50
+4      139465954       rs756165        A       C       .       PASS    AA=C;DP=128     GT:GQ:DP        1|1:71:22       1|1:83:26       1|1:100:68
+18     24967989        rs6508576       C       T       .       PASS    AA=T;DP=104     GT:GQ:DP        1|1:71:22       1|1:83:27       1|1:100:52
+3      65400320        rs4618170       A       G       .       PASS    AA=G;DP=111     GT:GQ:DP        1|1:71:22       1|1:83:27       1|1:100:62
+10     57650881        rs10763342      T       C       .       PASS    AA=C;DP=84      GT:GQ:DP        1|1:71:22       1|1:86:27       1|1:100:22
+7      55964488        rs6970353       T       C       .       PASS    AA=C;DP=80      GT:GQ:DP        1|1:71:22       1|1:86:28       1|1:100:25
+21     31288239        rs7277136       T       C       .       PASS    AA=C;DP=124     GT:GQ:DP        1|1:71:22       1|1:86:28       1|1:100:74
+2      48171971        rs1277456       C       T       .       PASS    AA=T;DP=107     GT:GQ:DP        1|1:71:22       1|1:86:34       1|1:100:53
+11     16414764        rs7104395       C       G       .       PASS    AA=c;DP=105     GT:GQ:DP        1|1:71:22       1|1:88:29       1|1:100:56
+10     83754484        rs6584459       T       C       .       PASS    AA=C;DP=132     GT:GQ:DP        1|1:71:22       1|1:89:28       1|1:100:68
+3      165316820       rs6548330       T       C       .       PASS    AA=C;DP=129     GT:GQ:DP        1|1:71:22       1|1:89:28       1|1:100:77
+9      114578389       rs787281        C       T       .       PASS    AA=N;DP=126     GT:GQ:DP        1|1:71:22       1|1:89:28       1|1:100:80
+11     5860787 rs7123169       T       C       .       PASS    AA=t;DP=118     GT:GQ:DP        1|1:71:22       1|1:89:29       1|1:100:68
+6      167617416       rs206988        A       G       .       PASS    AA=-;DP=109     GT:GQ:DP        1|1:71:22       1|1:89:30       1|1:100:58
+14     34922145        rs17514338      G       A       .       PASS    AA=G;DP=115     GT:GQ:DP        1|1:71:22       1|1:95:30       1|1:100:65
+13     84727646        rs2497422       A       G       .       PASS    AA=G;DP=94      GT:GQ:DP        1|1:71:22       1|1:95:31       1|1:100:35
+7      109731143       rs10487320      C       T       .       PASS    AA=C;DP=117     GT:GQ:DP        1|1:71:22       1|1:95:31       1|1:100:49
+2      102922083       rs12712167      G       A       .       PASS    AA=A;DP=91      GT:GQ:DP        1|1:71:22       1|1:98:31       1|1:100:34
+16     3506363 rs6501178       G       A       .       PASS    AA=A;DP=121     GT:GQ:DP        1|1:71:22       1|1:98:32       1|1:100:41
+10     50490351        rs8187730       C       A       .       PASS    AA=A;DP=99      GT:GQ:DP        1|1:71:23       1|1:29:8        1|1:100:67
+17     71398483        rs3760128       A       G       .       PASS    AA=G;DP=96      GT:GQ:DP        1|1:71:23       1|1:32:9        1|1:100:61
+19     15670985        rs624154        C       T       .       PASS    AA=C;DP=77      GT:GQ:DP        1|1:71:23       1|1:35:10       1|1:100:34
+18     9802188 rs7232667       G       A       .       PASS    AA=A;DP=100     GT:GQ:DP        1|1:71:23       1|1:35:11       1|1:100:68
+6      23595836        rs199059        C       T       .       PASS    AA=T;DP=107     GT:GQ:DP        1|1:71:23       1|1:39:22       1|1:100:61
+8      4012492 rs2552095       G       A       .       PASS    AA=A;DP=95      GT:GQ:DP        1|1:71:23       1|1:40:17       1|1:100:56
+1      214649158       rs4431908       A       C       .       PASS    AA=C;DP=114;HM2 GT:GQ:DP        1|1:71:23       1|1:42:22       1|1:100:70
+13     22510645        rs1170698       G       A       .       PASS    AA=.;DP=81      GT:GQ:DP        1|1:71:23       1|1:44:13       1|1:100:35
+9      11104588        rs2095306       T       C       .       PASS    AA=C;DP=93      GT:GQ:DP        1|1:71:23       1|1:44:14       1|1:100:44
+1      4020216 rs6426380       C       T       .       PASS    AA=C;DP=116;HM2 GT:GQ:DP        1|1:71:23       1|1:47:14       1|1:100:78
+10     25348896        rs7919641       C       T       .       PASS    AA=T;DP=87      GT:GQ:DP        1|1:71:23       1|1:47:16       1|1:100:49
+15     78832903        rs7182156       A       G       .       PASS    AA=G;DP=122     GT:GQ:DP        1|1:71:23       1|1:47:21       1|1:100:80
+12     8817278 rs2969089       T       C       .       PASS    AA=C;DP=117     GT:GQ:DP        1|1:71:23       1|1:53:17       1|1:100:74
+1      230476084       rs9286809       T       C       .       PASS    AA=C;DP=82;HM2  GT:GQ:DP        1|1:71:23       1|1:56:17       1|1:100:32
+2      5271200 rs1453792       A       G       .       PASS    AA=A;DP=91      GT:GQ:DP        1|1:71:23       1|1:56:17       1|1:100:54
+13     63483420        rs2027022       G       T       .       PASS    AA=G;DP=103     GT:GQ:DP        1|1:71:23       1|1:56:17       1|1:100:59
+13     46104815        rs4942559       G       C       .       PASS    AA=C;DP=85      GT:GQ:DP        1|1:71:23       1|1:56:18       1|1:100:43
+8      10483970        rs4419779       A       T       .       PASS    AA=T;DP=99      GT:GQ:DP        1|1:71:23       1|1:56:19       1|1:100:58
+3      164254601       rs7617459       G       A       .       PASS    AA=A;DP=109     GT:GQ:DP        1|1:71:23       1|1:56:19       1|1:100:67
+10     8600598 rs2765411       G       A       .       PASS    AA=A;DP=91      GT:GQ:DP        1|1:71:23       1|1:57:20       1|1:100:48
+6      153935600       rs9371709       C       T       .       PASS    AA=T;DP=107     GT:GQ:DP        1|1:71:23       1|1:59:18       1|1:100:67
+14     53403126        .       T       C       .       PASS    AA=T;DP=98      GT:GQ:DP        1|1:71:23       1|1:62:19       1|1:100:45
+1      192538611       rs1570835       A       G       .       PASS    AA=G;DP=92      GT:GQ:DP        1|1:71:23       1|1:62:19       1|1:100:49
+6      96248105        rs9482760       G       A       .       PASS    AA=A;DP=92      GT:GQ:DP        1|1:71:23       1|1:62:19       1|1:100:51
+1      80793066        rs12096086      C       T       .       PASS    AA=T;DP=97;HM2;HM3      GT:GQ:DP        1|1:71:23       1|1:62:20       1|1:100:51
+11     117497830       rs4938485       G       A       .       PASS    AA=A;DP=100     GT:GQ:DP        1|1:71:23       1|1:62:20       1|1:100:55
+17     527229  rs364809        G       A       .       PASS    AA=A;DP=120     GT:GQ:DP        1|1:71:23       1|1:62:21       1|1:100:77
+3      170774867       rs1362775       G       T       .       PASS    AA=T;DP=95      GT:GQ:DP        1|1:71:23       1|1:65:20       1|1:100:34
+2      48806205        rs6545063       C       G       .       PASS    AA=C;DP=89      GT:GQ:DP        1|1:71:23       1|1:65:20       1|1:100:45
+2      133594122       rs1007804       C       T       .       PASS    AA=T;DP=104     GT:GQ:DP        1|1:71:23       1|1:65:20       1|1:100:59
+1      156757255       rs11265003      C       T       .       PASS    AA=.;DP=111;HM2 GT:GQ:DP        1|1:71:23       1|1:65:20       1|1:100:68
+3      101791825       rs9834776       A       T       .       PASS    AA=T;DP=104     GT:GQ:DP        1|1:71:23       1|1:65:21       1|1:100:62
+5      57039712        rs2408846       T       C       .       PASS    AA=C;DP=107     GT:GQ:DP        1|1:71:23       1|1:65:21       1|1:100:62
+3      25997441        rs1426757       C       T       .       PASS    AA=C;DP=106     GT:GQ:DP        1|1:71:23       1|1:65:21       1|1:100:64
+16     77059304        rs2667539       A       G       .       PASS    AA=A;DP=98      GT:GQ:DP        1|1:71:23       1|1:68:21       1|1:100:56
+6      23546424        rs199032        T       C       .       PASS    AA=T;DP=105     GT:GQ:DP        1|1:71:23       1|1:68:21       1|1:100:63
+6      46739845        rs6901178       A       G       .       PASS    AA=G;DP=110     GT:GQ:DP        1|1:71:23       1|1:68:21       1|1:100:65
+1      176810576       rs2493863       A       T       .       PASS    AA=T;DP=111     GT:GQ:DP        1|1:71:23       1|1:68:21       1|1:100:68
+4      147993256       rs10004243      G       A       .       PASS    AA=A;DP=116     GT:GQ:DP        1|1:71:23       1|1:68:21       1|1:100:71
+6      62366094        rs7747910       C       T       .       PASS    AA=T;DP=124     GT:GQ:DP        1|1:71:23       1|1:68:21       1|1:100:75
+4      32419086        rs34295525      G       C       .       PASS    AA=C;DP=110     GT:GQ:DP        1|1:71:23       1|1:68:23       1|1:100:62
+1      82246111        rs7414912       C       G       .       PASS    AA=G;DP=100     GT:GQ:DP        1|1:71:23       1|1:71:22       1|1:100:54
+12     25779756        rs2054049       G       T       .       PASS    AA=T;DP=134     GT:GQ:DP        1|1:71:23       1|1:71:23       1|1:100:45
+15     56314643        rs4774291       C       A       .       PASS    AA=A;DP=104     GT:GQ:DP        1|1:71:23       1|1:74:23       1|1:100:62
+20     50566863        rs6021958       A       T       .       PASS    AA=T;DP=96      GT:GQ:DP        1|1:71:23       1|1:74:24       1|1:100:49
+9      122358899       rs4240465       G       A       .       PASS    AA=A;DP=104     GT:GQ:DP        1|1:71:23       1|1:74:24       1|1:100:56
+13     105191147       rs7995335       G       A       .       PASS    AA=A;DP=107     GT:GQ:DP        1|1:71:23       1|1:74:24       1|1:100:60
+4      173595862       rs336004        T       C       .       PASS    AA=C;DP=126     GT:GQ:DP        1|1:71:23       1|1:74:32       1|1:100:71
+6      74447112        rs4544874       C       G       .       PASS    AA=G;DP=118     GT:GQ:DP        1|1:71:23       1|1:77:24       1|1:100:71
+14     67398969        rs6573799       C       A       .       PASS    AA=A;DP=96      GT:GQ:DP        1|1:71:23       1|1:80:25       1|1:100:48
+12     83195937        rs2947139       T       A       .       PASS    AA=T;DP=112     GT:GQ:DP        1|1:71:23       1|1:80:26       1|1:100:63
+4      44305124        rs1439362       T       A       .       PASS    AA=A;DP=109     GT:GQ:DP        1|1:71:23       1|1:83:28       1|1:100:53
+6      133117134       rs2300078       A       G       .       PASS    AA=G;DP=117     GT:GQ:DP        1|1:71:23       1|1:86:28       1|1:100:66
+3      57503255        rs11710515      C       T       .       PASS    AA=T;DP=105     GT:GQ:DP        1|1:71:23       1|1:92:29       1|1:100:54
+7      153618251       rs4726401       A       G       .       PASS    AA=G;DP=120     GT:GQ:DP        1|1:71:23       1|1:92:29       1|1:100:68
+9      28858904        rs320946        A       G       .       PASS    AA=G;DP=103     GT:GQ:DP        1|1:71:23       1|1:95:32       1|1:100:48
+16     81077879        rs1424062       C       G       .       PASS    AA=G;DP=112     GT:GQ:DP        1|1:71:24       1|1:100:33      1|1:100:53
+20     62194903        rs6010720       G       A       .       PASS    AA=N;DP=100     GT:GQ:DP        1|1:71:24       1|1:19:13       1|1:100:54
+18     62402538        rs474961        T       C       .       PASS    AA=C;DP=110     GT:GQ:DP        1|1:71:24       1|1:36:20       1|1:100:68
+2      237086579       .       G       C       .       PASS    AA=C;DP=107     GT:GQ:DP        1|1:71:24       1|1:38:12       1|1:100:65
+8      143300045       rs4976968       T       C       .       PASS    AA=C;DP=81      GT:GQ:DP        1|1:71:24       1|1:41:12       1|1:100:44
+2      86515381        rs6547687       T       C       .       PASS    AA=C;DP=106     GT:GQ:DP        1|1:71:24       1|1:44:14       1|1:100:33
+3      16160624        rs1827763       T       C       .       PASS    AA=C;DP=98      GT:GQ:DP        1|1:71:24       1|1:49:20       1|1:100:54
+8      4476759 rs2447696       C       G       .       PASS    AA=G;DP=99      GT:GQ:DP        1|1:71:24       1|1:50:16       1|1:100:59
+1      25398494        rs2375112       C       T       .       PASS    AA=C;DP=97      GT:GQ:DP        1|1:71:24       1|1:53:16       1|1:100:45
+8      13227897        rs1563265       C       G       .       PASS    AA=G;DP=105     GT:GQ:DP        1|1:71:24       1|1:64:24       1|1:100:57
+4      63223049        rs4241641       C       T       .       PASS    AA=T;DP=89      GT:GQ:DP        1|1:71:24       1|1:65:21       1|1:100:44
+X      64183010        rs7067056       A       G       .       PASS    AA=G;DP=130     GT:GQ:DP        1|1:71:24       1|1:66:26       1|1:100:45
+20     16028071        rs1885939       C       T       .       PASS    AA=T;DP=94      GT:GQ:DP        1|1:71:24       1|1:68:22       1|1:100:37
+19     58839498        rs8112183       T       C       .       PASS    AA=N;DP=88      GT:GQ:DP        1|1:71:24       1|1:74:23       1|1:100:42
+6      164382215       rs446073        A       G       .       PASS    AA=A;DP=123     GT:GQ:DP        1|1:71:24       1|1:74:24       1|1:100:76
+7      33814331        rs10249468      A       G       .       PASS    AA=A;DP=128     GT:GQ:DP        1|1:71:24       1|1:80:31       1|1:100:72
+1      170520388       rs3850640       T       C       .       PASS    AA=T;DP=98;HM2;HM3      GT:GQ:DP        1|1:71:25       0|0:7:10        1|0:100:65
+4      114293337       rs7666110       T       C       .       PASS    AA=C;DP=80      GT:GQ:DP        1|1:71:25       1|1:24:13       1|1:100:38
+2      218994610       rs2384948       A       G       .       PASS    AA=a;DP=91      GT:GQ:DP        1|1:71:25       1|1:38:11       1|1:100:47
+12     113270637       rs7309910       C       G       .       PASS    AA=g;DP=115     GT:GQ:DP        1|1:71:25       1|1:62:22       1|1:100:70
+4      12601549        rs1355858       C       T       .       PASS    AA=T;DP=93      GT:GQ:DP        1|1:71:25       1|1:65:21       1|1:100:48
+3      32596052        rs4384987       C       A       .       PASS    AA=A;DP=131     GT:GQ:DP        1|1:71:25       1|1:77:25       1|1:100:82
+10     27584604        rs1887824       T       C       .       PASS    AA=N;DP=110     GT:GQ:DP        1|1:71:27       1|1:80:25       1|1:100:57
+2      209610098       rs1522180       T       C       .       PASS    AA=C;DP=117     GT:GQ:DP        1|1:71:28       1|1:80:25       1|1:100:64
+15     97509351        rs1703765       T       C       .       PASS    AA=C;DP=149     GT:GQ:DP        1|1:71:28       1|1:83:27       1|1:100:93
+6      51729998        rs2661486       G       A       .       PASS    AA=A;DP=120     GT:GQ:DP        1|1:71:29       1|0:100:27      1|1:100:64
+3      61425980        rs7372403       A       G       .       PASS    AA=G;DP=103     GT:GQ:DP        1|1:71:29       1|1:30:25       1|1:100:35
+15     66450281        rs4776400       C       G       .       PASS    AA=G;DP=84      GT:GQ:DP        1|1:71:29       1|1:38:11       1|1:100:33
+17     59613289        rs8072509       T       G       .       PASS    AA=G;DP=118     GT:GQ:DP        1|1:71:29       1|1:43:24       1|1:100:63
+2      194759894       rs1914631       A       G       .       PASS    AA=A;DP=106     GT:GQ:DP        1|1:71:29       1|1:44:15       1|1:100:62
+15     99910471        rs11638560      C       G       .       PASS    AA=C;DP=100     GT:GQ:DP        1|1:71:29       1|1:47:20       1|1:100:51
+10     10323988        rs1333835       G       A       .       PASS    AA=G;DP=122     GT:GQ:DP        1|1:71:29       1|1:68:26       1|1:100:67
+2      71675046        rs10205698      G       A       .       PASS    AA=A;DP=129     GT:GQ:DP        1|1:71:29       1|1:80:27       1|1:100:75
+12     67132533        rs4913450       T       C       .       PASS    AA=t;DP=114     GT:GQ:DP        1|1:71:30       1|1:50:15       1|1:100:69
+2      113024987       rs2304555       T       A       .       PASS    AA=T;DP=140     GT:GQ:DP        1|1:71:31       0|0:87:30       1|0:100:78
+1      58146905        rs9645409       G       C       .       PASS    AA=G;DP=130;HM2 GT:GQ:DP        1|1:71:32       0|0:66:22       1|0:100:76
+15     92894369        rs8028986       T       G       .       PASS    AA=t;DP=126     GT:GQ:DP        1|1:71:32       1|0:100:26      1|1:100:67
+1      156355311       rs12061698      G       A       .       PASS    AA=N;DP=106;HM2;HM3     GT:GQ:DP        1|1:71:32       1|0:56:15       1|1:100:61
+5      143167683       .       G       T       .       PASS    AA=G;DP=138     GT:GQ:DP        1|1:71:33       0|0:69:24       1|0:100:82
+8      74555072        rs13268841      G       A       .       PASS    AA=A;DP=132     GT:GQ:DP        1|1:71:33       1|0:100:21      1|1:100:79
+18     14039688        rs1473165       C       T       .       PASS    AA=t;DP=121     GT:GQ:DP        1|1:71:33       1|1:38:17       1|1:100:70
+16     76166779        .       G       A       .       PASS    AA=G;DP=130     GT:GQ:DP        1|1:71:37       0|0:51:19       1|0:100:75
+3      26260887        rs9809243       G       A       .       PASS    AA=g;DP=130     GT:GQ:DP        1|1:71:37       0|0:63:22       1|0:100:72
+10     12872846        rs2482041       T       G       .       PASS    AA=G;DP=123     GT:GQ:DP        1|1:71:47       1|1:24:21       1|1:98:41
+12     60578683        rs2359975       C       A       .       PASS    AA=C;DP=96      GT:GQ:DP        1|1:72:24       1|0:100:13      1|1:100:57
+3      124323789       rs836852        A       C       .       PASS    AA=A;DP=94      GT:GQ:DP        1|1:72:24       1|0:100:16      1|1:100:55
+1      228318130       rs12565365      G       A       .       PASS    AA=A;DP=119     GT:GQ:DP        1|1:72:24       1|0:100:17      1|1:100:78
+4      167612222       rs1388880       G       A       .       PASS    AA=A;DP=77      GT:GQ:DP        1|1:72:24       1|0:100:17      1|1:87:29
+22     16319816        rs2522284       C       T       .       PASS    AA=T;DP=114     GT:GQ:DP        1|1:72:24       1|0:100:18      1|1:100:72
+6      94176913        rs474809        G       A       .       PASS    AA=A;DP=100     GT:GQ:DP        1|1:72:24       1|0:100:19      1|1:100:50
+14     71133849        rs10147863      G       A       .       PASS    AA=A;DP=106     GT:GQ:DP        1|1:72:24       1|0:100:20      1|1:100:63
+21     39173903        rs992242        C       A       .       PASS    AA=A;DP=112     GT:GQ:DP        1|1:72:24       1|0:100:21      1|1:100:64
+15     33471563        rs1563292       T       G       .       PASS    AA=G;DP=124     GT:GQ:DP        1|1:72:24       1|0:100:21      1|1:100:75
+3      169308853       rs1608123       T       C       .       PASS    AA=t;DP=82      GT:GQ:DP        1|1:72:24       1|0:100:21      1|1:93:31
+7      49734785        rs6583393       A       C       .       PASS    AA=A;DP=111     GT:GQ:DP        1|1:72:24       1|0:100:22      1|1:100:65
+3      28508462        rs13099814      A       G       .       PASS    AA=G;DP=112     GT:GQ:DP        1|1:72:24       1|0:100:24      1|1:100:64
+7      82591942        rs11974451      G       A       .       PASS    AA=A;DP=104     GT:GQ:DP        1|1:72:24       1|0:100:25      1|1:100:54
+13     108157163       rs9520971       G       C       .       PASS    AA=G;DP=113     GT:GQ:DP        1|1:72:24       1|0:100:25      1|1:100:62
+6      85109291        rs13191052      A       G       .       PASS    AA=-;DP=99      GT:GQ:DP        1|1:72:24       1|0:100:26      1|1:100:41
+21     41867346        rs28622449      T       C       .       PASS    AA=t;DP=106     GT:GQ:DP        1|1:72:24       1|0:100:26      1|1:100:57
+1      97409554        rs10875053      C       G       .       PASS    AA=C;DP=124;HM2;HM3     GT:GQ:DP        1|1:72:24       1|0:100:27      1|1:100:74
+6      10318928        rs6911250       G       T       .       PASS    AA=T;DP=104     GT:GQ:DP        1|1:72:24       1|0:100:28      1|1:100:40
+3      70677665        rs17007397      C       G       .       PASS    AA=C;DP=117     GT:GQ:DP        1|1:72:24       1|0:100:28      1|1:100:59
+18     59279418        rs9320017       C       T       .       PASS    AA=T;DP=121     GT:GQ:DP        1|1:72:24       1|0:100:28      1|1:100:67
+8      64046044        rs6472063       T       C       .       PASS    AA=C;DP=99      GT:GQ:DP        1|1:72:24       1|0:100:29      1|1:100:37
+2      150099709       rs4458182       A       T       .       PASS    AA=T;DP=115     GT:GQ:DP        1|1:72:24       1|0:100:29      1|1:100:60
+12     116177420       rs2650163       A       G       .       PASS    AA=G;DP=119     GT:GQ:DP        1|1:72:24       1|0:100:29      1|1:100:64
+8      125218759       rs10103694      T       C       .       PASS    AA=C;DP=119     GT:GQ:DP        1|1:72:24       1|0:100:30      1|1:100:65
+15     89166169        rs372098        T       C       .       PASS    AA=C;DP=111     GT:GQ:DP        1|1:72:24       1|0:100:31      1|1:100:57
+5      40557405        rs1876143       A       G       .       PASS    AA=G;DP=123     GT:GQ:DP        1|1:72:24       1|0:100:31      1|1:100:67
+7      52036399        rs9642449       G       A       .       PASS    AA=T;DP=100     GT:GQ:DP        1|1:72:24       1|0:41:20       1|1:100:51
+X      2493289 rs1184697       T       G       .       PASS    AA=.;DP=83      GT:GQ:DP        1|1:72:24       1|0:52:12       1|1:100:42
+5      65638559        rs753660        A       G       .       PASS    AA=A;DP=101     GT:GQ:DP        1|1:72:24       1|0:55:14       1|1:100:64
+9      99651054        rs12348304      T       C       .       PASS    AA=T;DP=93      GT:GQ:DP        1|1:72:24       1|0:61:14       1|1:100:55
+6      154700502       rs9397704       A       G       .       PASS    AA=G;DP=109     GT:GQ:DP        1|1:72:24       1|0:64:19       1|1:100:68
+1      219041014       rs2642445       C       A       .       PASS    AA=A;DP=139;HM2;HM3     GT:GQ:DP        1|1:72:24       1|0:68:20       1|1:100:50
+6      71905973        rs1592227       G       A       .       PASS    AA=A;DP=108     GT:GQ:DP        1|1:72:24       1|0:69:17       1|1:100:69
+2      131395349       rs11887132      G       T       .       PASS    AA=T;DP=121     GT:GQ:DP        1|1:72:24       1|0:76:33       1|1:100:62
+3      104816019       rs4856075       G       A       .       PASS    AA=A;DP=98      GT:GQ:DP        1|1:72:24       1|0:81:22       1|1:100:51
+8      134191625       .       C       T       .       PASS    AA=C;DP=86      GT:GQ:DP        1|1:72:24       1|0:86:14       1|1:100:34
+4      131263223       rs12186169      G       A       .       PASS    AA=g;DP=82      GT:GQ:DP        1|1:72:24       1|0:86:18       1|1:93:31
+4      11545502        rs7659652       C       T       .       PASS    AA=T;DP=100     GT:GQ:DP        1|1:72:24       1|0:88:20       1|1:100:57
+2      137684999       rs2117748       T       C       .       PASS    AA=T;DP=90      GT:GQ:DP        1|1:72:24       1|0:92:13       1|1:86:51
+2      143295835       rs10211383      C       T       .       PASS    AA=T;DP=107     GT:GQ:DP        1|1:72:24       1|0:92:27       1|1:100:56
+8      18555063        rs11785325      C       T       .       PASS    AA=T;DP=100     GT:GQ:DP        1|1:72:24       1|0:95:25       1|1:100:51
+9      9499467 rs10759080      C       A       .       PASS    AA=C;DP=115     GT:GQ:DP        1|1:72:24       1|0:97:22       1|1:100:69
+5      78110674        rs754566        C       A       .       PASS    AA=A;DP=110     GT:GQ:DP        1|1:72:24       1|0:99:15       1|1:100:71
+5      75986211        rs458994        A       C       .       PASS    AA=C;DP=106     GT:GQ:DP        1|1:72:24       1|0:99:22       1|1:100:57
+16     65545005        rs6499107       T       C       .       PASS    AA=C;DP=64      GT:GQ:DP        1|1:72:24       1|1:11:9        1|1:89:26
+9      5306139 rs1407387       C       T       .       PASS    AA=T;DP=88      GT:GQ:DP        1|1:72:25       0|1:100:17      1|0:100:46
+11     99424216        rs10791129      C       G       .       PASS    AA=C;DP=91      GT:GQ:DP        1|1:72:25       0|1:100:17      1|0:100:50
+7      26963684        rs17436438      A       G       .       PASS    AA=-;DP=82      GT:GQ:DP        1|1:72:25       0|1:100:19      1|0:100:33
+15     73108192        rs1867150       T       C       .       PASS    AA=C;DP=105     GT:GQ:DP        1|1:72:25       0|1:100:19      1|0:100:60
+12     13853537        rs220587        G       C       .       PASS    AA=G;DP=116     GT:GQ:DP        1|1:72:25       0|1:100:19      1|0:100:72
+4      23032271        rs215414        T       G       .       PASS    AA=T;DP=95      GT:GQ:DP        1|1:72:25       0|1:100:20      1|0:100:49
+5      44722945        rs4571480       C       T       .       PASS    AA=C;DP=121     GT:GQ:DP        1|1:72:25       0|1:100:21      1|0:100:71
+9      132773387       rs4740383       G       A       .       PASS    AA=A;DP=131     GT:GQ:DP        1|1:72:25       0|1:100:22      1|0:100:45
+19     57551640        rs321946        G       A       .       PASS    AA=.;DP=104     GT:GQ:DP        1|1:72:25       0|1:100:22      1|0:100:56
+1      187213260       rs7512275       G       A       .       PASS    AA=N;DP=104     GT:GQ:DP        1|1:72:25       0|1:100:23      1|0:100:55
+9      4670429 rs10974728      C       T       .       PASS    AA=C;DP=119     GT:GQ:DP        1|1:72:25       0|1:100:23      1|0:100:69
+1      30334653        rs6661562       G       A       .       PASS    AA=G;DP=108;HM2;HM3     GT:GQ:DP        1|1:72:25       0|1:100:24      1|0:100:58
+8      26583485        rs17055681      A       G       .       PASS    AA=G;DP=108     GT:GQ:DP        1|1:72:25       0|1:100:24      1|0:100:60
+1      14711318        rs10927453      G       A       .       PASS    AA=G;DP=122;HM3 GT:GQ:DP        1|1:72:25       0|1:100:24      1|0:100:73
+14     52053626        rs9323232       G       C       .       PASS    AA=C;DP=129     GT:GQ:DP        1|1:72:25       0|1:100:24      1|0:100:80
+7      87472451        rs2023533       G       A       .       PASS    AA=A;DP=100     GT:GQ:DP        1|1:72:25       0|1:100:25      1|0:100:49
+16     53303111        rs1420553       G       A       .       PASS    AA=G;DP=124     GT:GQ:DP        1|1:72:25       0|1:100:25      1|0:100:73
+8      18630898        rs2410588       C       T       .       PASS    AA=C;DP=112     GT:GQ:DP        1|1:72:25       0|1:100:26      1|0:100:62
+3      68405970        rs6549098       G       A       .       PASS    AA=A;DP=126     GT:GQ:DP        1|1:72:25       0|1:100:30      1|0:100:54
+10     65532552        .       G       A       .       PASS    AA=G;DP=123     GT:GQ:DP        1|1:72:25       0|1:100:30      1|0:100:68
+10     34483337        rs674388        G       C       .       PASS    AA=C;DP=123     GT:GQ:DP        1|1:72:25       0|1:100:33      1|0:100:64
+17     13571473        rs9906262       A       T       .       PASS    AA=t;DP=141     GT:GQ:DP        1|1:72:25       0|1:100:33      1|0:100:81
+12     27551124        rs306600        T       C       .       PASS    AA=C;DP=141     GT:GQ:DP        1|1:72:25       0|1:100:34      1|0:100:82
+7      152432448       rs478538        T       G       .       PASS    AA=T;DP=112     GT:GQ:DP        1|1:72:25       0|1:12:22       1|0:100:61
+14     60190751        rs4141685       G       A       .       PASS    AA=A;DP=102     GT:GQ:DP        1|1:72:25       0|1:26:16       1|0:100:62
+6      70234137        rs13204142      C       A       .       PASS    AA=C;DP=78      GT:GQ:DP        1|1:72:25       0|1:26:7        1|0:100:37
+20     39543034        rs6072385       A       G       .       PASS    AA=G;DP=102     GT:GQ:DP        1|1:72:25       0|1:38:17       1|0:100:61
+2      3752311 rs357940        C       T       .       PASS    AA=T;DP=87      GT:GQ:DP        1|1:72:25       0|1:52:12       1|0:100:51
+4      183897229       rs7691449       G       A       .       PASS    AA=A;DP=113     GT:GQ:DP        1|1:72:25       0|1:53:21       1|0:100:64
+3      144037707       rs4376003       C       T       .       PASS    AA=T;DP=104     GT:GQ:DP        1|1:72:25       0|1:61:14       1|0:100:67
+13     101645393       rs606663        G       T       .       PASS    AA=T;DP=92      GT:GQ:DP        1|1:72:25       0|1:61:18       1|0:100:49
+15     59563026        rs11630875      C       T       .       PASS    AA=C;DP=89      GT:GQ:DP        1|1:72:25       0|1:64:14       1|0:100:47
+11     78686801        rs500964        C       G       .       PASS    AA=C;DP=119     GT:GQ:DP        1|1:72:25       0|1:69:14       1|0:100:36
+5      174701564       rs4868512       G       A       .       PASS    AA=A;DP=120     GT:GQ:DP        1|1:72:25       0|1:70:28       1|0:100:67
+3      159292081       rs6798355       G       A       .       PASS    AA=A;DP=119     GT:GQ:DP        1|1:72:25       0|1:75:21       1|0:100:59
+13     81023853        rs4453360       A       G       .       PASS    AA=G;DP=115     GT:GQ:DP        1|1:72:25       0|1:76:26       1|0:100:65
+12     107675524       rs7303331       T       G       .       PASS    AA=N;DP=102     GT:GQ:DP        1|1:72:25       0|1:84:13       1|0:100:66
+7      55847705        rs28803557      G       A       .       PASS    AA=G;DP=113     GT:GQ:DP        1|1:72:25       0|1:86:17       1|0:100:73
+10     19816642        rs1332926       G       A       .       PASS    AA=A;DP=100     GT:GQ:DP        1|1:72:25       0|1:89:19       1|0:100:57
+13     113656182       rs61967977      C       G       .       PASS    AA=N;DP=102     GT:GQ:DP        1|1:72:25       0|1:90:16       1|0:100:50
+10     26996438        rs2489561       C       T       .       PASS    AA=.;DP=99      GT:GQ:DP        1|1:72:25       0|1:95:21       1|0:100:52
+12     90830819        rs4131582       T       C       .       PASS    AA=C;DP=117     GT:GQ:DP        1|1:72:25       1|0:100:13      1|1:100:81
+4      128700899       rs7663339       T       C       .       PASS    AA=G;DP=101     GT:GQ:DP        1|1:72:25       1|0:100:16      1|1:100:49
+13     83376790        rs11843049      A       G       .       PASS    AA=G;DP=92      GT:GQ:DP        1|1:72:25       1|0:100:16      1|1:100:51
+5      18429287        rs1918343       G       A       .       PASS    AA=G;DP=109     GT:GQ:DP        1|1:72:25       1|0:100:22      1|1:100:59
+1      229171924       rs10779800      T       C       .       PASS    AA=t;DP=114;HM2;HM3     GT:GQ:DP        1|1:72:25       1|0:100:22      1|1:100:67
+18     62886648        rs9960362       C       T       .       PASS    AA=T;DP=79      GT:GQ:DP        1|1:72:25       1|0:100:22      1|1:69:23
+6      10364729        rs9368175       T       C       .       PASS    AA=C;DP=89      GT:GQ:DP        1|1:72:25       1|0:100:23      1|1:100:41
+9      2922813 rs7858374       A       G       .       PASS    AA=G;DP=115     GT:GQ:DP        1|1:72:25       1|0:100:23      1|1:100:54
+1      202874064       rs11240231      C       T       .       PASS    AA=C;DP=119;HM2 GT:GQ:DP        1|1:72:25       1|0:100:23      1|1:100:72
+7      146648356       rs2692149       C       G       .       PASS    AA=C;DP=114     GT:GQ:DP        1|1:72:25       1|0:100:25      1|1:100:63
+5      122733636       rs6893539       C       A       .       PASS    AA=C;DP=96      GT:GQ:DP        1|1:72:25       1|0:100:25      1|1:96:47
+13     33538522        rs9539639       T       G       .       PASS    AA=T;DP=114     GT:GQ:DP        1|1:72:25       1|0:100:26      1|1:100:58
+3      12050344        rs402149        G       A       .       PASS    AA=A;DP=113     GT:GQ:DP        1|1:72:25       1|0:100:26      1|1:100:63
+X      9895097 .       T       C       .       PASS    AA=T;DP=119     GT:GQ:DP        1|1:72:25       1|0:100:27      1|1:87:41
+6      87491867        rs663614        G       T       .       PASS    AA=.;DP=122     GT:GQ:DP        1|1:72:25       1|0:38:15       1|1:100:83
+5      50559126        rs7716272       G       A       .       PASS    AA=N;DP=103     GT:GQ:DP        1|1:72:25       1|0:42:20       1|1:100:59
+14     99286305        rs8004746       C       G       .       PASS    AA=G;DP=105     GT:GQ:DP        1|1:72:25       1|0:48:15       1|1:100:67
+7      7602280 rs28674483      G       A       .       PASS    AA=G;DP=98      GT:GQ:DP        1|1:72:25       1|0:86:19       1|1:100:38
+7      54801703        rs2699232       G       C       .       PASS    AA=C;DP=122     GT:GQ:DP        1|1:72:26       0|1:100:17      1|0:100:36
+7      149198031       rs17756342      C       T       .       PASS    AA=C;DP=127     GT:GQ:DP        1|1:72:26       0|1:100:22      1|0:100:80
+5      117511381       rs1351240       T       G       .       PASS    AA=G;DP=139     GT:GQ:DP        1|1:72:26       0|1:100:28      1|0:100:83
+3      194520109       rs2886984       A       G       .       PASS    AA=G;DP=141     GT:GQ:DP        1|1:72:26       0|1:100:28      1|0:100:86
+1      157122058       rs2820141       C       T       .       PASS    AA=C;DP=125;HM2 GT:GQ:DP        1|1:72:26       0|1:100:33      1|0:100:66
+9      3535559 rs2027089       T       C       .       PASS    AA=C;DP=107     GT:GQ:DP        1|1:72:26       0|1:100:36      1|0:100:45
+3      111974530       rs964444        T       C       .       PASS    AA=t;DP=118     GT:GQ:DP        1|1:72:26       0|1:17:20       1|0:100:74
+13     101455939       rs9557779       T       C       .       PASS    AA=C;DP=102     GT:GQ:DP        1|1:72:26       0|1:26:13       1|0:100:64
+7      132046100       rs503874        G       A       .       PASS    AA=A;DP=107     GT:GQ:DP        1|1:72:26       0|1:34:13       1|0:100:69
+6      56284120        rs4302670       C       T       .       PASS    AA=C;DP=89      GT:GQ:DP        1|1:72:26       0|1:71:13       1|0:100:49
+1      16391100        .       G       A       .       PASS    AA=g;DP=92      GT:GQ:DP        1|1:72:26       0|1:72:12       1|0:100:46
+1      4806096 rs7547779       T       C       .       PASS    AA=C;DP=121;HM2 GT:GQ:DP        1|1:72:26       0|1:81:16       1|0:100:79
+4      179779887       rs1897765       A       G       .       PASS    AA=G;DP=101     GT:GQ:DP        1|1:72:26       0|1:82:13       1|0:100:62
+6      106691788       rs9373835       T       C       .       PASS    AA=C;DP=101     GT:GQ:DP        1|1:72:26       0|1:84:20       1|0:100:54
+11     118491840       rs608444        G       A       .       PASS    AA=G;DP=105     GT:GQ:DP        1|1:72:26       0|1:89:14       1|0:100:67
+10     18741841        rs11014125      C       G       .       PASS    AA=C;DP=114     GT:GQ:DP        1|1:72:26       0|1:95:19       1|0:100:70
+14     43522574        rs10147104      A       G       .       PASS    AA=A;DP=101     GT:GQ:DP        1|1:72:26       1|0:100:17      1|1:100:58
+13     85121438        rs1591639       T       C       .       PASS    AA=C;DP=100     GT:GQ:DP        1|1:72:26       1|0:100:25      1|1:100:51
+4      24389953        rs800401        C       G       .       PASS    AA=G;DP=110     GT:GQ:DP        1|1:72:26       1|0:100:25      1|1:90:59
+4      122145867       rs4314309       A       G       .       PASS    AA=A;DP=93      GT:GQ:DP        1|1:72:26       1|0:24:15       1|1:100:56
+8      41973258        rs10958705      A       G       .       PASS    AA=G;DP=77      GT:GQ:DP        1|1:72:26       1|0:68:14       1|1:90:30
+10     11794883        rs6602516       A       G       .       PASS    AA=G;DP=103     GT:GQ:DP        1|1:72:26       1|0:84:19       1|1:100:58
+7      97329067        rs4729387       T       C       .       PASS    AA=T;DP=98      GT:GQ:DP        1|1:72:26       1|0:91:26       1|1:100:48
+6      147682292       rs2218221       T       G       .       PASS    AA=G;DP=116     GT:GQ:DP        1|1:72:27       0|1:100:20      1|0:100:72
+14     100105805       rs7141087       T       C       .       PASS    AA=t;DP=136     GT:GQ:DP        1|1:72:27       0|1:100:21      1|0:100:48
+5      44627572        rs4348227       C       T       .       PASS    AA=T;DP=125     GT:GQ:DP        1|1:72:27       0|1:100:25      1|0:100:72
+13     24613088        rs1891118       A       G       .       PASS    AA=-;DP=121     GT:GQ:DP        1|1:72:27       1|0:100:17      1|1:100:79
+7      16886001        rs4370433       G       A       .       PASS    AA=A;DP=125     GT:GQ:DP        1|1:72:27       1|0:100:18      1|1:100:81
+17     78593728        rs967825        C       T       .       PASS    AA=T;DP=110     GT:GQ:DP        1|1:72:27       1|0:100:22      1|1:100:62
+3      150554813       rs6440601       G       A       .       PASS    AA=G;DP=117     GT:GQ:DP        1|1:72:27       1|0:100:29      1|1:100:61
+5      169384838       rs2173922       A       G       .       PASS    AA=G;DP=103     GT:GQ:DP        1|1:72:27       1|0:79:18       1|1:100:58
+18     11029926        rs7234347       C       T       .       PASS    AA=C;DP=121     GT:GQ:DP        1|1:72:28       0|0:84:28       1|0:100:66
+13     110243618       rs9515287       A       G       .       PASS    AA=A;DP=131     GT:GQ:DP        1|1:72:28       0|1:72:22       1|0:100:79
+19     39124070        rs4805962       T       C       .       PASS    AA=T;DP=109     GT:GQ:DP        1|1:72:28       0|1:78:11       1|0:100:73
+10     72677221        rs6480502       T       A       .       PASS    AA=A;DP=124     GT:GQ:DP        1|1:72:28       1|1:50:15       1|1:100:80
+7      4275220 rs4720213       T       A       .       PASS    AA=A;DP=132     GT:GQ:DP        1|1:72:28       1|1:62:19       1|1:100:37
+10     107967858       rs1409403       C       A       .       PASS    AA=A;DP=112     GT:GQ:DP        1|1:72:28       1|1:80:26       1|1:100:56
+5      57135530        rs854046        A       C       .       PASS    AA=C;DP=112     GT:GQ:DP        1|1:72:29       1|1:36:23       1|1:100:58
+2      14582831        rs4668832       G       T       .       PASS    AA=G;DP=93      GT:GQ:DP        1|1:72:29       1|1:53:17       1|1:100:34
+14     31524261        rs1958916       C       T       .       PASS    AA=T;DP=103     GT:GQ:DP        1|1:72:29       1|1:77:24       1|1:100:51
+7      124603717       rs792626        C       T       .       PASS    AA=C;DP=104     GT:GQ:DP        1|1:72:30       1|0:100:16      1|1:100:60
+11     108879829       rs1371335       T       C       .       PASS    AA=C;DP=106     GT:GQ:DP        1|1:72:30       1|1:54:23       1|1:100:53
+19     15636210        rs10426584      T       C       .       PASS    AA=C;DP=109     GT:GQ:DP        1|1:72:30       1|1:68:21       1|1:100:58
+15     59870702        rs16953454      C       T       .       PASS    AA=T;DP=142     GT:GQ:DP        1|1:72:30       1|1:89:30       1|1:100:84
+11     75836284        rs10793168      T       C       .       PASS    AA=C;DP=109     GT:GQ:DP        1|1:72:30       1|1:95:30       1|1:100:52
+3      166099507       rs7639098       A       C       .       PASS    AA=A;DP=114     GT:GQ:DP        1|1:72:31       0|0:75:25       1|0:100:57
+17     19141092        rs4924978       C       A       .       PASS    AA=C;DP=118     GT:GQ:DP        1|1:72:31       1|1:56:17       1|1:100:49
+10     55666767        rs721825        C       T       .       PASS    AA=T;DP=102     GT:GQ:DP        1|1:72:31       1|1:59:19       1|1:100:51
+7      107348391       rs2108223       T       C       .       PASS    AA=C;DP=131     GT:GQ:DP        1|1:72:31       1|1:68:23       1|1:100:74
+22     45617090        rs11090899      T       C       .       PASS    AA=C;DP=135     GT:GQ:DP        1|1:72:32       0|0:75:31       1|0:100:76
+3      14323712        rs6764181       A       G       .       PASS    AA=G;DP=138     GT:GQ:DP        1|1:72:32       1|0:91:23       1|1:100:75
+4      131827567       rs17051069      C       T       .       PASS    AA=C;DP=114     GT:GQ:DP        1|1:72:33       0|0:57:20       1|0:100:62
+3      98268377        rs16838196      G       A       .       PASS    AA=A;DP=113     GT:GQ:DP        1|1:72:34       0|0:57:19       1|0:100:61
+10     131896061       rs10829713      C       A       .       PASS    AA=-;DP=130     GT:GQ:DP        1|1:72:34       1|1:24:28       1|1:70:68
+2      19750861        rs6713954       T       C       .       PASS    AA=C;DP=116     GT:GQ:DP        1|1:72:34       1|1:32:20       1|1:100:53
+8      19430748        rs2958578       T       G       .       PASS    AA=G;DP=132     GT:GQ:DP        1|1:72:34       1|1:41:25       1|1:100:69
+7      28583857        rs150614        T       G       .       PASS    AA=G;DP=106     GT:GQ:DP        1|1:72:34       1|1:43:18       1|1:100:43
+8      105375513       rs2441848       A       T       .       PASS    AA=c;DP=106     GT:GQ:DP        1|1:72:34       1|1:47:14       1|1:100:45
+2      52802646        rs1349880       C       T       .       PASS    AA=T;DP=119     GT:GQ:DP        1|1:72:34       1|1:49:21       1|1:100:63
+19     57044252        rs7252849       G       A       .       PASS    AA=A;DP=126     GT:GQ:DP        1|1:72:34       1|1:59:18       1|1:100:73
+13     21403002        rs1610332       A       G       .       PASS    AA=G;DP=123     GT:GQ:DP        1|1:72:34       1|1:74:23       1|1:100:65
+5      150720942       rs3846711       A       G       .       PASS    AA=G;DP=143     GT:GQ:DP        1|1:72:34       1|1:82:30       1|1:100:69
+9      135483003       rs2519764       C       A       .       PASS    AA=A;DP=142     GT:GQ:DP        1|1:72:34       1|1:89:28       1|1:100:80
+5      1279105 rs12514171      C       T       .       PASS    AA=C;DP=117     GT:GQ:DP        1|1:72:35       0|0:45:15       1|0:100:68
+4      100850096       rs7663535       G       A       .       PASS    AA=G;DP=126     GT:GQ:DP        1|1:72:35       1|0:100:27      1|1:100:60
+16     73681779        rs7186372       G       T       .       PASS    AA=T;DP=150     GT:GQ:DP        1|1:72:48       1|0:88:16       1|1:100:85
+7      156345602       rs7779025       T       C       .       PASS    AA=C;DP=134     GT:GQ:DP        1|1:72:49       0|1:52:28       1|0:100:58
+9      113617401       rs452151        T       C       .       PASS    AA=T;DP=81      GT:GQ:DP        1|1:73:24       1|1:12:17       1|1:96:29
+9      135225708       rs3118660       T       A       .       PASS    AA=T;DP=151     GT:GQ:DP        1|1:73:26       0|0:100:34      1|0:100:90
+17     72432667        rs3889145       G       C       .       PASS    AA=G;DP=85      GT:GQ:DP        1|1:73:26       0|0:11:14       1|0:100:45
+1      37736553        rs17558598      A       T       .       PASS    AA=a;DP=87      GT:GQ:DP        1|1:73:26       0|0:22:18       1|0:100:40
+4      167873813       .       A       G       .       PASS    AA=a;DP=97      GT:GQ:DP        1|1:73:26       0|0:30:10       1|0:100:58
+2      82144466        rs12714081      G       A       .       PASS    AA=G;DP=99      GT:GQ:DP        1|1:73:26       0|0:30:12       1|0:100:64
+15     98722633        .       A       G       .       PASS    AA=A;DP=91      GT:GQ:DP        1|1:73:26       0|0:39:14       1|0:100:51
+3      68553875        rs9842711       C       G       .       PASS    AA=C;DP=97      GT:GQ:DP        1|1:73:26       0|0:45:15       1|0:100:53
+13     35374927        .       C       T       .       PASS    AA=C;DP=105     GT:GQ:DP        1|1:73:26       0|0:45:19       1|0:100:60
+9      8720751 rs56227950      C       T       .       PASS    AA=T;DP=91      GT:GQ:DP        1|1:73:26       0|0:45:21       1|0:100:37
+20     40669342        rs6102938       A       G       .       PASS    AA=A;DP=109     GT:GQ:DP        1|1:73:26       0|0:48:16       1|0:100:67
+17     48516732        rs992229        G       A       .       PASS    AA=A;DP=92      GT:GQ:DP        1|1:73:26       0|0:48:17       1|0:100:49
+14     98661073        rs807445        T       C       .       PASS    AA=T;DP=107     GT:GQ:DP        1|1:73:26       0|0:48:20       1|0:100:50
+3      161760854       rs1882127       G       A       .       PASS    AA=A;DP=115     GT:GQ:DP        1|1:73:26       0|0:51:17       1|0:100:74
+5      173755651       rs1820651       A       G       .       PASS    AA=A;DP=103     GT:GQ:DP        1|1:73:26       0|0:54:18       1|0:100:61
+3      119509501       rs705257        A       C       .       PASS    AA=A;DP=106     GT:GQ:DP        1|1:73:26       0|0:54:18       1|0:100:62
+13     109507415       rs61361143      C       T       .       PASS    AA=c;DP=107     GT:GQ:DP        1|1:73:26       0|0:54:18       1|0:100:63
+10     79513815        rs4979800       A       G       .       PASS    AA=a;DP=133     GT:GQ:DP        1|1:73:26       0|0:54:19       1|0:100:45
+12     24390521        rs16927488      C       G       .       PASS    AA=C;DP=106     GT:GQ:DP        1|1:73:26       0|0:57:19       1|0:100:62
+9      82215269        rs1347374       C       T       .       PASS    AA=T;DP=113     GT:GQ:DP        1|1:73:26       0|0:57:20       1|0:100:67
+12     46132222        rs721371        A       G       .       PASS    AA=.;DP=115     GT:GQ:DP        1|1:73:26       0|0:57:20       1|0:100:69
+12     29714799        rs11050352      A       G       .       PASS    AA=a;DP=128     GT:GQ:DP        1|1:73:26       0|0:60:21       1|0:100:79
+4      162444130       rs4507316       C       G       .       PASS    AA=c;DP=128     GT:GQ:DP        1|1:73:26       0|0:60:21       1|0:100:80
+7      149749523       rs7803619       T       C       .       PASS    AA=C;DP=136     GT:GQ:DP        1|1:73:26       0|0:63:22       1|0:100:42
+2      218415998       rs41497947      T       G       .       PASS    AA=T;DP=127     GT:GQ:DP        1|1:73:26       0|0:63:22       1|0:100:76
+20     33439888        rs6088815       G       C       .       PASS    AA=C;DP=128     GT:GQ:DP        1|1:73:26       0|0:63:23       1|0:100:77
+12     115868792       rs4077519       G       C       .       PASS    AA=G;DP=139     GT:GQ:DP        1|1:73:26       0|0:66:23       1|0:100:89
+2      77944586        rs10180629      G       A       .       PASS    AA=a;DP=122     GT:GQ:DP        1|1:73:26       0|0:69:23       1|0:100:71
+13     45329691        rs7338621       T       C       .       PASS    AA=T;DP=105     GT:GQ:DP        1|1:73:26       0|0:69:25       1|0:100:55
+2      72155095        .       G       A       .       PASS    AA=A;DP=113     GT:GQ:DP        1|1:73:26       0|0:69:25       1|0:100:60
+7      99208429        rs2738258       T       C       .       PASS    AA=.;DP=122     GT:GQ:DP        1|1:73:26       0|0:72:26       1|0:100:70
+5      147604197       rs9325092       A       G       .       PASS    AA=G;DP=126     GT:GQ:DP        1|1:73:26       0|0:72:26       1|0:100:73
+3      160673133       rs7639027       G       A       .       PASS    AA=A;DP=119     GT:GQ:DP        1|1:73:26       0|0:74:30       1|0:100:63
+14     35742124        rs1755772       G       A       .       PASS    AA=A;DP=113     GT:GQ:DP        1|1:73:26       0|0:75:25       1|0:100:63
+17     62817788        rs8066725       G       A       .       PASS    AA=G;DP=123     GT:GQ:DP        1|1:73:26       0|0:75:25       1|0:100:74
+6      67174258        .       C       G       .       PASS    AA=C;DP=113     GT:GQ:DP        1|1:73:26       0|0:75:31       1|0:100:57
+9      134171098       rs10114360      C       T       .       PASS    AA=T;DP=107     GT:GQ:DP        1|1:73:26       0|0:78:26       1|0:100:32
+1      99647798        rs17120318      G       A       .       PASS    AA=A;DP=143;HM2;HM3     GT:GQ:DP        1|1:73:26       0|0:78:26       1|0:100:40
+4      78522175        rs1962027       T       C       .       PASS    AA=N;DP=116     GT:GQ:DP        1|1:73:26       0|0:78:26       1|0:100:64
+8      70382061        .       A       C       .       PASS    AA=A;DP=121     GT:GQ:DP        1|1:73:26       0|0:81:27       1|0:100:67
+12     11113741        .       C       A       .       PASS    AA=N;DP=121     GT:GQ:DP        1|1:73:26       0|0:81:27       1|0:100:69
+6      106781543       rs665791        G       A       .       PASS    AA=A;DP=110     GT:GQ:DP        1|1:73:26       0|0:84:28       1|0:100:56
+7      57237133        rs11769004      C       T       .       PASS    AA=C;DP=118     GT:GQ:DP        1|1:73:26       0|0:84:28       1|0:100:63
+1      50680686        .       C       G       .       PASS    AA=G;DP=149     GT:GQ:DP        1|1:73:26       0|0:84:30       1|0:100:94
+1      119267798       rs4659129       A       G       .       PASS    AA=A;DP=124;HM2 GT:GQ:DP        1|1:73:26       0|0:87:36       1|0:100:64
+22     48345462        rs135826        G       A       .       PASS    AA=G;DP=119     GT:GQ:DP        1|1:73:26       0|0:8:11        1|0:100:85
+9      2596948 rs7855257       C       G       .       PASS    AA=G;DP=123     GT:GQ:DP        1|1:73:26       0|0:90:31       1|0:100:67
+22     32685763        .       T       C       .       PASS    AA=T;DP=137     GT:GQ:DP        1|1:73:26       0|0:93:31       1|0:100:84
+16     57353450        rs8052824       T       A       .       PASS    AA=T;DP=117     GT:GQ:DP        1|1:73:26       0|0:99:33       1|0:100:58
+5      126764044       rs12109001      A       G       .       PASS    AA=A;DP=115     GT:GQ:DP        1|1:73:26       1|0:98:21       1|1:100:71
+3      65856632        rs9865096       C       G       .       PASS    AA=G;DP=96      GT:GQ:DP        1|1:73:27       0|0:33:13       1|0:100:55
+1      241836758       rs10754806      A       C       .       PASS    AA=c;DP=104     GT:GQ:DP        1|1:73:27       0|0:35:20       1|0:100:45
+17     63173516        rs8068183       A       G       .       PASS    AA=A;DP=89      GT:GQ:DP        1|1:73:27       0|0:39:13       1|0:100:44
+4      154098531       rs10011789      A       G       .       PASS    AA=G;DP=91      GT:GQ:DP        1|1:73:27       0|0:45:15       1|0:100:41
+6      52668336        rs9357742       G       C       .       PASS    AA=C;DP=98      GT:GQ:DP        1|1:73:27       0|0:45:15       1|0:100:56
+6      136354943       rs9494433       G       A       .       PASS    AA=G;DP=103     GT:GQ:DP        1|1:73:27       0|0:45:16       1|0:100:60
+1      63873472        rs2301057       A       G       .       PASS    AA=G;DP=108     GT:GQ:DP        1|1:73:27       0|0:51:17       1|0:100:64
+6      71338142        rs12197963      T       C       .       PASS    AA=C;DP=111     GT:GQ:DP        1|1:73:27       0|0:54:18       1|0:100:68
+18     47724362        rs2953259       T       C       .       PASS    AA=T;DP=89      GT:GQ:DP        1|1:73:27       0|0:57:19       1|0:100:43
+11     60100651        rs2868222       C       T       .       PASS    AA=T;DP=123     GT:GQ:DP        1|1:73:27       0|0:60:21       1|0:100:73
+5      121879511       rs11241646      C       T       .       PASS    AA=T;DP=132     GT:GQ:DP        1|1:73:27       0|0:60:21       1|0:100:83
+4      85520164        rs403525        A       G       .       PASS    AA=G;DP=124     GT:GQ:DP        1|1:73:27       0|0:63:21       1|0:100:77
+15     68512485        rs747170        T       C       .       PASS    AA=C;DP=117     GT:GQ:DP        1|1:73:27       0|0:63:23       1|0:100:54
+7      146004630       .       A       G       .       PASS    AA=A;DP=123     GT:GQ:DP        1|1:73:27       0|0:64:27       1|0:100:64
+8      96599748        rs904923        C       T       .       PASS    AA=C;DP=112     GT:GQ:DP        1|1:73:27       0|0:66:23       1|0:100:66
+13     31620329        rs2285331       C       T       .       PASS    AA=C;DP=122     GT:GQ:DP        1|1:73:27       0|0:66:23       1|0:100:74
+6      71276728        rs12527634      T       C       .       PASS    AA=C;DP=106     GT:GQ:DP        1|1:73:27       0|0:69:23       1|0:100:56
+3      63356201        rs9834062       C       T       .       PASS    AA=C;DP=127     GT:GQ:DP        1|1:73:27       0|0:69:24       1|0:100:69
+11     125362035       rs641744        C       T       .       PASS    AA=T;DP=127     GT:GQ:DP        1|1:73:27       0|0:69:24       1|0:100:75
+7      121890045       rs6948516       T       C       .       PASS    AA=C;DP=96      GT:GQ:DP        1|1:73:27       0|0:72:26       1|0:100:31
+20     19520713        rs2876538       C       T       .       PASS    AA=C;DP=132     GT:GQ:DP        1|1:73:27       0|0:76:34       1|0:100:71
+4      28233061        .       T       A       .       PASS    AA=T;DP=125     GT:GQ:DP        1|1:73:27       0|0:78:27       1|0:100:77
+13     76259754        rs8000613       A       G       .       PASS    AA=G;DP=119     GT:GQ:DP        1|1:73:27       0|0:81:27       1|0:100:57
+14     43577850        rs57519376      T       C       .       PASS    AA=C;DP=128     GT:GQ:DP        1|1:73:27       0|0:84:28       1|0:100:73
+7      120498146       rs9690141       A       G       .       PASS    AA=A;DP=133     GT:GQ:DP        1|1:73:27       0|0:87:30       1|0:100:77
+5      174439848       rs62388576      G       A       .       PASS    AA=G;DP=159     GT:GQ:DP        1|1:73:27       0|0:93:31       1|0:100:51
+17     75874606        rs7220465       G       A       .       PASS    AA=-;DP=84      GT:GQ:DP        1|1:73:27       1|1:17:7        1|1:100:42
+5      102982800       rs10793826      G       C       .       PASS    AA=C;DP=138     GT:GQ:DP        1|1:73:27       1|1:77:24       1|1:100:45
+5      96768358        rs10035513      C       T       .       PASS    AA=C;DP=113     GT:GQ:DP        1|1:73:28       0|0:48:16       1|0:100:70
+14     83743469        rs12431743      G       A       .       PASS    AA=A;DP=130     GT:GQ:DP        1|1:73:28       0|0:51:19       1|0:100:84
+11     19966386        rs2568136       C       T       .       PASS    AA=T;DP=134     GT:GQ:DP        1|1:73:28       0|0:66:22       1|0:100:85
+17     2832054 rs7213097       C       T       .       PASS    AA=C;DP=113     GT:GQ:DP        1|1:73:28       0|0:72:24       1|0:100:45
+14     26321335        rs990173        C       T       .       PASS    AA=C;DP=114     GT:GQ:DP        1|1:73:28       0|0:72:24       1|0:100:62
+6      35244984        rs55974914      C       T       .       PASS    AA=C;DP=121     GT:GQ:DP        1|1:73:28       0|0:78:27       1|0:100:64
+18     4082326 rs12971086      T       C       .       PASS    AA=t;DP=150     GT:GQ:DP        1|1:73:28       0|0:78:27       1|0:100:98
+7      122460351       rs4727959       C       T       .       PASS    AA=T;DP=143     GT:GQ:DP        1|1:73:28       0|0:81:29       1|0:100:86
+9      89280889        rs4878079       C       G       .       PASS    AA=.;DP=130     GT:GQ:DP        1|1:73:28       0|0:90:31       1|0:100:72
+10     102084668       rs577915        C       T       .       PASS    AA=T;DP=135     GT:GQ:DP        1|1:73:28       1|1:59:18       1|1:100:85
+2      129152005       rs10176331      T       C       .       PASS    AA=C;DP=130     GT:GQ:DP        1|1:73:29       1|1:100:36      1|1:100:66
+7      70000348        rs2866808       T       C       .       PASS    AA=t;DP=103     GT:GQ:DP        1|1:73:29       1|1:42:22       1|1:100:40
+3      24231481        rs826250        A       T       .       PASS    AA=A;DP=118     GT:GQ:DP        1|1:73:29       1|1:61:25       1|1:100:64
+7      14896818        rs217585        A       G       .       PASS    AA=G;DP=108     GT:GQ:DP        1|1:73:29       1|1:62:19       1|1:100:60
+15     55474000        rs4774260       C       A       .       PASS    AA=C;DP=114     GT:GQ:DP        1|1:73:30       1|1:62:19       1|1:100:67
+8      98241872        rs2513396       C       T       .       PASS    AA=T;DP=103     GT:GQ:DP        1|1:73:30       1|1:71:23       1|1:100:53
+10     48161262        rs9421761       G       A       .       PASS    AA=A;DP=121     GT:GQ:DP        1|1:73:30       1|1:71:29       1|1:100:61
+1      6344283 rs7512532       G       C       .       PASS    AA=C;DP=112;HM2 GT:GQ:DP        1|1:73:31       1|0:16:12       1|1:100:67
+6      5069415 rs373696        A       G       .       PASS    AA=G;DP=115     GT:GQ:DP        1|1:73:32       1|0:100:19      1|1:100:54
+4      29028538        rs6448641       G       A       .       PASS    AA=A;DP=113     GT:GQ:DP        1|1:73:32       1|0:62:20       1|1:100:60
+3      34878928        rs1403439       T       A       .       PASS    AA=T;DP=117     GT:GQ:DP        1|1:73:32       1|1:89:29       1|1:100:56
+1      229861417       rs1094653       C       A       .       PASS    AA=A;DP=87;HM3  GT:GQ:DP        1|1:73:33       0|1:65:9        1|0:100:45
+9      13759690        rs10756499      A       T       .       PASS    AA=T;DP=113     GT:GQ:DP        1|1:73:34       0|1:100:24      1|0:100:57
+17     34180257        rs228289        T       G       .       PASS    AA=C;DP=155     GT:GQ:DP        1|1:73:36       0|0:90:30       1|0:100:48
+1      222349915       .       T       G       .       PASS    AA=T;DP=123     GT:GQ:DP        1|1:73:36       1|0:100:22      1|1:100:66
+8      6769096 rs2738121       T       C       .       PASS    AA=.;DP=136     GT:GQ:DP        1|1:73:36       1|0:93:28       1|1:100:74
+6      161198928       rs4709473       T       C       .       PASS    AA=-;DP=139     GT:GQ:DP        1|1:73:36       1|1:68:21       1|1:100:83
+4      77938803        rs11097519      G       A       .       PASS    AA=A;DP=146     GT:GQ:DP        1|1:73:37       0|0:72:24       1|0:100:88
+16     12109192        rs183008        T       C       .       PASS    AA=T;DP=136     GT:GQ:DP        1|1:73:37       0|1:100:30      1|0:100:70
+6      99620521        rs2067012       T       A       .       PASS    AA=A;DP=134     GT:GQ:DP        1|1:73:37       0|1:100:32      1|0:100:63
+22     27840124        rs134684        C       T       .       PASS    AA=T;DP=112     GT:GQ:DP        1|1:73:37       0|1:65:19       1|0:100:59
+2      190060813       rs12693540      C       T       .       PASS    AA=T;DP=136     GT:GQ:DP        1|1:73:37       0|1:91:16       1|0:100:72
+10     51188679        rs2611507       T       C       .       PASS    AA=t;DP=146     GT:GQ:DP        1|1:73:37       1|0:100:21      1|1:100:85
+16     86234107        rs7205964       G       A       .       PASS    AA=A;DP=151     GT:GQ:DP        1|1:73:38       0|0:51:17       1|0:100:52
+18     27344891        rs55989406      C       T       .       PASS    AA=T;DP=136     GT:GQ:DP        1|1:73:41       0|0:60:20       1|0:100:72
+4      148632933       rs1996374       G       A       .       PASS    AA=A;DP=113     GT:GQ:DP        1|1:74:23       1|1:100:33      1|1:100:56
+18     51432658        rs2957260       A       G       .       PASS    AA=G;DP=121     GT:GQ:DP        1|1:74:23       1|1:100:34      1|1:100:66
+10     114080315       rs4917633       A       C       .       PASS    AA=C;DP=114     GT:GQ:DP        1|1:74:23       1|1:18:15       1|1:100:75
+13     59675814        .       T       C       .       PASS    AA=C;DP=74      GT:GQ:DP        1|1:74:23       1|1:18:15       1|1:93:25
+6      73923771        rs884957        G       A       .       PASS    AA=G;DP=97      GT:GQ:DP        1|1:74:23       1|1:19:13       1|1:100:64
+3      45657935        rs9858840       A       T       .       PASS    AA=t;DP=61      GT:GQ:DP        1|1:74:23       1|1:20:5        1|1:83:21
+1      217488502       rs1474373       A       G       .       PASS    AA=G;DP=97;HM2;HM3      GT:GQ:DP        1|1:74:23       1|1:21:16       1|1:100:58
+1      22993525        rs1866794       C       T       .       PASS    AA=C;DP=121;HM2 GT:GQ:DP        1|1:74:23       1|1:21:16       1|1:100:85
+12     76274681        rs1918215       T       C       .       PASS    AA=C;DP=101     GT:GQ:DP        1|1:74:23       1|1:23:12       1|1:100:67
+11     106241575       rs2129737       T       C       .       PASS    AA=C;DP=90      GT:GQ:DP        1|1:74:23       1|1:23:14       1|1:100:41
+8      145661204       rs2620645       A       C       .       PASS    AA=N;DP=100     GT:GQ:DP        1|1:74:23       1|1:25:16       1|1:100:62
+14     94355812        rs28637721      C       T       .       PASS    AA=C;DP=99      GT:GQ:DP        1|1:74:23       1|1:26:12       1|1:100:64
+19     51666442        rs6509275       T       C       .       PASS    AA=C;DP=77      GT:GQ:DP        1|1:74:23       1|1:26:7        1|1:100:34
+15     91389340        rs4238485       A       C       .       PASS    AA=C;DP=107     GT:GQ:DP        1|1:74:23       1|1:26:7        1|1:100:73
+9      132856715       rs12019412      G       T       .       PASS    AA=T;DP=81      GT:GQ:DP        1|1:74:23       1|1:26:8        1|1:100:40
+3      165584049       rs9860144       A       G       .       PASS    AA=a;DP=106     GT:GQ:DP        1|1:74:23       1|1:27:22       1|1:100:60
+3      105900491       rs1996758       C       A       .       PASS    AA=A;DP=78      GT:GQ:DP        1|1:74:23       1|1:29:19       1|1:100:35
+8      63968035        rs10957253      A       G       .       PASS    AA=A;DP=85      GT:GQ:DP        1|1:74:23       1|1:29:19       1|1:100:36
+6      153633596       rs9322418       G       T       .       PASS    AA=G;DP=106     GT:GQ:DP        1|1:74:23       1|1:29:19       1|1:100:65
+6      19336264        rs2842435       T       C       .       PASS    AA=t;DP=72      GT:GQ:DP        1|1:74:23       1|1:29:8        1|1:100:41
+10     121097330       rs291966        T       C       .       PASS    AA=C;DP=99      GT:GQ:DP        1|1:74:23       1|1:29:9        1|1:100:68
+13     22655669        rs598656        T       C       .       PASS    AA=C;DP=96      GT:GQ:DP        1|1:74:23       1|1:32:11       1|1:100:60
+10     63199623        rs2675615       C       A       .       PASS    AA=A;DP=80      GT:GQ:DP        1|1:74:23       1|1:32:9        1|1:100:50
+2      116076687       rs4390773       G       A       .       PASS    AA=G;DP=78      GT:GQ:DP        1|1:74:23       1|1:35:10       1|1:100:46
+1      18085294        rs579985        A       G       .       PASS    AA=G;DP=87;HM2;HM3      GT:GQ:DP        1|1:74:23       1|1:35:10       1|1:100:48
+11     129260184       rs1469400       G       C       .       PASS    AA=C;DP=109     GT:GQ:DP        1|1:74:23       1|1:35:10       1|1:100:75
+15     76918420        rs8041607       A       G       .       PASS    AA=A;DP=110     GT:GQ:DP        1|1:74:23       1|1:35:10       1|1:100:80
+3      35999974        rs4300963       T       C       .       PASS    AA=C;DP=99      GT:GQ:DP        1|1:74:23       1|1:35:21       1|1:100:55
+1      73365869        rs4306084       G       A       .       PASS    AA=A;DP=69      GT:GQ:DP        1|1:74:23       1|1:38:12       1|1:85:34
+11     4920679 rs2595996       A       C       .       PASS    AA=A;DP=109     GT:GQ:DP        1|1:74:23       1|1:38:22       1|1:100:63
+11     39402572        rs10768482      T       A       .       PASS    AA=A;DP=89      GT:GQ:DP        1|1:74:23       1|1:39:22       1|1:100:28
+3      164195023       rs9681949       T       G       .       PASS    AA=G;DP=79      GT:GQ:DP        1|1:74:23       1|1:41:12       1|1:100:45
+4      81419669        rs6827834       C       T       .       PASS    AA=T;DP=111     GT:GQ:DP        1|1:74:23       1|1:41:12       1|1:100:60
+10     125955278       rs6597849       A       G       .       PASS    AA=G;DP=124     GT:GQ:DP        1|1:74:23       1|1:41:17       1|1:100:83
+18     74052879        rs11659627      A       C       .       PASS    AA=C;DP=101     GT:GQ:DP        1|1:74:23       1|1:41:23       1|1:100:39
+4      58428809        rs6824736       C       G       .       PASS    AA=G;DP=104     GT:GQ:DP        1|1:74:23       1|1:41:23       1|1:100:54
+11     8035374 rs7942171       C       A       .       PASS    AA=A;DP=108     GT:GQ:DP        1|1:74:23       1|1:41:23       1|1:100:62
+1      52995986        rs6693210       A       G       .       PASS    AA=G;DP=99;HM2  GT:GQ:DP        1|1:74:23       1|1:42:18       1|1:100:59
+2      142452595       rs1561022       G       T       .       PASS    AA=G;DP=69      GT:GQ:DP        1|1:74:23       1|1:44:13       1|1:100:27
+2      138426243       rs3113241       C       T       .       PASS    AA=C;DP=77      GT:GQ:DP        1|1:74:23       1|1:44:13       1|1:100:31
+8      120257010       rs2465373       C       T       .       PASS    AA=T;DP=100     GT:GQ:DP        1|1:74:23       1|1:44:13       1|1:100:65
+11     133426675       rs2846633       G       T       .       PASS    AA=T;DP=92      GT:GQ:DP        1|1:74:23       1|1:44:17       1|1:100:52
+15     37650188        rs2618165       C       A       .       PASS    AA=A;DP=122     GT:GQ:DP        1|1:74:23       1|1:46:25       1|1:100:75
+1      25242431        rs421483        G       T       .       PASS    AA=N;DP=93      GT:GQ:DP        1|1:74:23       1|1:47:14       1|1:100:49
+3      165829420       rs13067917      G       C       .       PASS    AA=C;DP=86      GT:GQ:DP        1|1:74:23       1|1:47:14       1|1:100:51
+9      83561930        rs1007994       T       C       .       PASS    AA=C;DP=102     GT:GQ:DP        1|1:74:23       1|1:47:14       1|1:100:67
+4      67228737        rs6846377       C       T       .       PASS    AA=T;DP=107     GT:GQ:DP        1|1:74:23       1|1:47:14       1|1:100:74
+4      152819820       rs2007445       C       T       .       PASS    AA=T;DP=109     GT:GQ:DP        1|1:74:23       1|1:47:14       1|1:100:75
+2      29935474        rs7568708       C       T       .       PASS    AA=T;DP=121     GT:GQ:DP        1|1:74:23       1|1:47:14       1|1:100:83
+4      8066769 rs10938681      A       G       .       PASS    AA=N;DP=122     GT:GQ:DP        1|1:74:23       1|1:47:14       1|1:100:84
+3      83087950        rs9309924       T       G       .       PASS    AA=T;DP=68      GT:GQ:DP        1|1:74:23       1|1:47:15       1|1:100:23
+4      182298970       rs6552485       A       G       .       PASS    AA=G;DP=80      GT:GQ:DP        1|1:74:23       1|1:47:15       1|1:100:32
+8      14014081        rs10106579      G       T       .       PASS    AA=T;DP=80      GT:GQ:DP        1|1:74:23       1|1:47:15       1|1:100:43
+4      12266274        rs1520285       T       A       .       PASS    AA=A;DP=102     GT:GQ:DP        1|1:74:23       1|1:48:24       1|1:100:55
+11     83786819        rs7108323       A       C       .       PASS    AA=C;DP=119     GT:GQ:DP        1|1:74:23       1|1:49:22       1|1:100:74
+17     74779680        rs2377391       T       C       .       PASS    AA=C;DP=72      GT:GQ:DP        1|1:74:23       1|1:50:15       1|1:100:32
+1      15326520        rs6662650       T       G       .       PASS    AA=G;DP=79      GT:GQ:DP        1|1:74:23       1|1:50:15       1|1:100:36
+10     59249686        rs2393391       A       G       .       PASS    AA=N;DP=85      GT:GQ:DP        1|1:74:23       1|1:50:15       1|1:100:46
+1      185278040       rs1555199       C       T       .       PASS    AA=T;DP=89;HM3  GT:GQ:DP        1|1:74:23       1|1:50:15       1|1:100:50
+10     44115074        rs1746054       A       G       .       PASS    AA=T;DP=90      GT:GQ:DP        1|1:74:23       1|1:50:15       1|1:100:52
+18     64139739        rs206755        C       A       .       PASS    AA=A;DP=91      GT:GQ:DP        1|1:74:23       1|1:50:16       1|1:100:42
+6      31346287        rs9264637       G       C       .       PASS    AA=N;DP=97      GT:GQ:DP        1|1:74:23       1|1:50:16       1|1:100:43
+8      28094346        rs1381116       C       T       .       PASS    AA=T;DP=105     GT:GQ:DP        1|1:74:23       1|1:50:18       1|1:100:54
+16     77599333        rs4888916       G       A       .       PASS    AA=A;DP=112     GT:GQ:DP        1|1:74:23       1|1:50:23       1|1:100:67
+4      95911664        rs12508087      A       T       .       PASS    AA=T;DP=111     GT:GQ:DP        1|1:74:23       1|1:52:26       1|1:100:60
+5      52161135        rs2454586       G       A       .       PASS    AA=A;DP=83      GT:GQ:DP        1|1:74:23       1|1:53:16       1|1:100:43
+7      85780720        rs2191857       A       G       .       PASS    AA=a;DP=87      GT:GQ:DP        1|1:74:23       1|1:53:16       1|1:100:43
+5      112420394       rs4705760       C       T       .       PASS    AA=T;DP=107     GT:GQ:DP        1|1:74:23       1|1:53:16       1|1:100:68
+16     69954422        rs6499509       T       C       .       PASS    AA=t;DP=82      GT:GQ:DP        1|1:74:23       1|1:53:17       1|1:100:36
+3      98410453        rs9784387       C       T       .       PASS    AA=T;DP=95      GT:GQ:DP        1|1:74:23       1|1:53:17       1|1:100:54
+8      3996938 rs1714744       C       T       .       PASS    AA=T;DP=108     GT:GQ:DP        1|1:74:23       1|1:53:17       1|1:100:66
+5      178963773       rs6892293       T       C       .       PASS    AA=N;DP=102     GT:GQ:DP        1|1:74:23       1|1:53:18       1|1:100:62
+5      57501858        rs2910611       G       C       .       PASS    AA=G;DP=87      GT:GQ:DP        1|1:74:23       1|1:56:17       1|1:100:48
+1      118427153       rs10047258      C       T       .       PASS    AA=T;DP=95      GT:GQ:DP        1|1:74:23       1|1:56:17       1|1:100:53
+3      115985534       rs2140346       G       A       .       PASS    AA=A;DP=98      GT:GQ:DP        1|1:74:23       1|1:56:17       1|1:100:56
+3      156141607       rs55968737      C       G       .       PASS    AA=G;DP=93      GT:GQ:DP        1|1:74:23       1|1:56:17       1|1:100:56
+13     68345625        rs9541598       A       T       .       PASS    AA=A;DP=98      GT:GQ:DP        1|1:74:23       1|1:56:17       1|1:100:58
+2      82058507        rs1521668       A       C       .       PASS    AA=C;DP=97      GT:GQ:DP        1|1:74:23       1|1:56:25       1|1:100:50
+1      85671803        rs506082        A       C       .       PASS    AA=A;DP=87      GT:GQ:DP        1|1:74:23       1|1:57:22       1|1:100:32
+11     123260054       rs10893099      T       C       .       PASS    AA=C;DP=131     GT:GQ:DP        1|1:74:23       1|1:57:24       1|1:100:43
+12     38468045        rs9645805       T       C       .       PASS    AA=T;DP=78      GT:GQ:DP        1|1:74:23       1|1:58:18       1|1:100:28
+12     59909361        rs4562895       T       C       .       PASS    AA=C;DP=75      GT:GQ:DP        1|1:74:23       1|1:59:18       1|1:100:27
+10     83261605        rs1980535       C       T       .       PASS    AA=T;DP=97      GT:GQ:DP        1|1:74:23       1|1:59:18       1|1:100:38
+3      180432991       rs1607237       C       T       .       PASS    AA=T;DP=89      GT:GQ:DP        1|1:74:23       1|1:59:18       1|1:100:48
+3      146907272       rs2461804       G       T       .       PASS    AA=T;DP=84      GT:GQ:DP        1|1:74:23       1|1:62:19       1|1:100:30
+7      13103667        rs2357193       T       G       .       PASS    AA=G;DP=112     GT:GQ:DP        1|1:74:23       1|1:62:19       1|1:100:31
+1      154805778       rs6427319       T       C       .       PASS    AA=t;DP=100     GT:GQ:DP        1|1:74:23       1|1:62:19       1|1:100:59
+4      82537548        rs10028610      G       A       .       PASS    AA=G;DP=102     GT:GQ:DP        1|1:74:23       1|1:62:19       1|1:100:61
+6      124659220       rs1916791       T       C       .       PASS    AA=t;DP=79      GT:GQ:DP        1|1:74:23       1|1:62:21       1|1:100:36
+17     45783318        rs2586459       A       G       .       PASS    AA=G;DP=92      GT:GQ:DP        1|1:74:23       1|1:62:21       1|1:100:41
+18     33023004        rs2586781       A       G       .       PASS    AA=A;DP=97      GT:GQ:DP        1|1:74:23       1|1:62:21       1|1:100:56
+1      3950813 rs10737411      A       G       .       PASS    AA=G;DP=104     GT:GQ:DP        1|1:74:23       1|1:62:27       1|1:100:40
+8      122244373       rs10956006      G       A       .       PASS    AA=A;DP=77      GT:GQ:DP        1|1:74:23       1|1:65:20       1|1:100:32
+5      103671147       rs980667        G       A       .       PASS    AA=A;DP=99      GT:GQ:DP        1|1:74:23       1|1:65:20       1|1:100:57
+8      138452205       rs6991953       A       C       .       PASS    AA=C;DP=86      GT:GQ:DP        1|1:74:23       1|1:65:21       1|1:100:25
+3      18894443        rs4521251       A       G       .       PASS    AA=G;DP=102     GT:GQ:DP        1|1:74:23       1|1:65:22       1|1:100:55
+8      24647595        rs11992743      C       T       .       PASS    AA=T;DP=127     GT:GQ:DP        1|1:74:23       1|1:65:22       1|1:100:85
+7      30496482        rs2529445       A       G       .       PASS    AA=A;DP=96      GT:GQ:DP        1|1:74:23       1|1:65:23       1|1:100:51
+6      50910480        rs2746649       A       T       .       PASS    AA=T;DP=99      GT:GQ:DP        1|1:74:23       1|1:65:23       1|1:100:56
+12     89332981        rs704118        A       G       .       PASS    AA=G;DP=135     GT:GQ:DP        1|1:74:23       1|1:66:32       1|1:100:54
+11     104201414       rs10736643      A       T       .       PASS    AA=T;DP=107     GT:GQ:DP        1|1:74:23       1|1:67:27       1|1:100:54
+9      73250178        rs2309926       C       G       .       PASS    AA=G;DP=78      GT:GQ:DP        1|1:74:23       1|1:68:21       1|1:100:22
+9      110033844       rs7046057       A       C       .       PASS    AA=C;DP=90      GT:GQ:DP        1|1:74:23       1|1:68:21       1|1:100:45
+2      141238904       rs1486128       A       G       .       PASS    AA=A;DP=119     GT:GQ:DP        1|1:74:23       1|1:68:22       1|1:100:76
+20     11241050        rs6040519       T       A       .       PASS    AA=A;DP=99      GT:GQ:DP        1|1:74:23       1|1:69:26       1|1:100:50
+10     111996659       rs7897645       C       A       .       PASS    AA=A;DP=100     GT:GQ:DP        1|1:74:23       1|1:71:22       1|1:100:51
+3      132828435       rs7611808       G       A       .       PASS    AA=A;DP=115     GT:GQ:DP        1|1:74:23       1|1:71:22       1|1:100:69
+1      214712184       rs4846475       T       C       .       PASS    AA=T;DP=119     GT:GQ:DP        1|1:74:23       1|1:71:22       1|1:100:75
+3      168156625       rs4680647       T       C       .       PASS    AA=C;DP=129     GT:GQ:DP        1|1:74:23       1|1:71:23       1|1:100:38
+6      113690246       rs774401        T       C       .       PASS    AA=C;DP=89      GT:GQ:DP        1|1:74:23       1|1:71:23       1|1:100:42
+11     97870575        rs4551724       T       C       .       PASS    AA=C;DP=107     GT:GQ:DP        1|1:74:23       1|1:71:23       1|1:100:49
+5      129674106       rs2158961       A       G       .       PASS    AA=A;DP=114     GT:GQ:DP        1|1:74:23       1|1:71:23       1|1:100:69
+3      46018300        rs7622333       T       C       .       PASS    AA=C;DP=121     GT:GQ:DP        1|1:74:23       1|1:71:23       1|1:100:75
+1      102256403       .       A       G       .       PASS    AA=G;DP=104;HM2 GT:GQ:DP        1|1:74:23       1|1:71:24       1|1:100:58
+5      72962270        rs6881956       A       G       .       PASS    AA=G;DP=125     GT:GQ:DP        1|1:74:23       1|1:71:24       1|1:100:78
+2      64731343        rs2422277       C       G       .       PASS    AA=G;DP=118     GT:GQ:DP        1|1:74:23       1|1:71:28       1|1:100:68
+11     12077753        rs4756768       C       A       .       PASS    AA=N;DP=115     GT:GQ:DP        1|1:74:23       1|1:74:23       1|1:100:28
+17     65748851        rs236564        G       T       .       PASS    AA=T;DP=85      GT:GQ:DP        1|1:74:23       1|1:74:23       1|1:100:33
+3      31237310        rs4434175       C       A       .       PASS    AA=A;DP=98      GT:GQ:DP        1|1:74:23       1|1:74:23       1|1:100:53
+4      72783729        rs413347        T       G       .       PASS    AA=G;DP=101     GT:GQ:DP        1|1:74:23       1|1:74:23       1|1:100:53
+2      139762225       rs7593768       A       T       .       PASS    AA=T;DP=112     GT:GQ:DP        1|1:74:23       1|1:74:23       1|1:100:66
+4      35414906        rs6531387       C       T       .       PASS    AA=T;DP=105     GT:GQ:DP        1|1:74:23       1|1:77:24       1|1:100:57
+8      39667535        rs1349547       C       T       .       PASS    AA=T;DP=115     GT:GQ:DP        1|1:74:23       1|1:77:24       1|1:100:69
+16     7591163 rs4426364       G       A       .       PASS    AA=A;DP=122     GT:GQ:DP        1|1:74:23       1|1:77:24       1|1:100:71
+6      153465614       rs514784        G       C       .       PASS    AA=C;DP=102     GT:GQ:DP        1|1:74:23       1|1:77:25       1|1:100:44
+6      70006829        rs779458        C       T       .       PASS    AA=T;DP=104     GT:GQ:DP        1|1:74:23       1|1:77:25       1|1:100:55
+16     76495786        rs6564483       G       A       .       PASS    AA=A;DP=120     GT:GQ:DP        1|1:74:23       1|1:77:26       1|1:100:73
+10     36443804        rs991629        C       T       .       PASS    AA=T;DP=98      GT:GQ:DP        1|1:74:23       1|1:80:25       1|1:100:47
+6      22862397        rs4445053       G       A       .       PASS    AA=A;DP=105     GT:GQ:DP        1|1:74:23       1|1:80:25       1|1:100:49
+7      79498471        rs4731146       C       T       .       PASS    AA=T;DP=97      GT:GQ:DP        1|1:74:23       1|1:80:25       1|1:100:50
+14     95823678        rs11160326      C       T       .       PASS    AA=T;DP=118     GT:GQ:DP        1|1:74:23       1|1:80:25       1|1:100:70
+16     10390711        rs1348506       C       T       .       PASS    AA=T;DP=121     GT:GQ:DP        1|1:74:23       1|1:80:25       1|1:100:74
+6      104576064       rs9499725       G       A       .       PASS    AA=A;DP=126     GT:GQ:DP        1|1:74:23       1|1:80:25       1|1:100:78
+1      150936965       rs4845317       A       G       .       PASS    AA=A;DP=121;HM2;HM3     GT:GQ:DP        1|1:74:23       1|1:80:26       1|1:100:73
+13     105742686       rs354437        A       G       .       PASS    AA=G;DP=125     GT:GQ:DP        1|1:74:23       1|1:80:26       1|1:100:76
+14     28331725        rs1950192       T       C       .       PASS    AA=C;DP=129     GT:GQ:DP        1|1:74:23       1|1:83:26       1|1:100:80
+13     40703754        rs7326526       C       G       .       PASS    AA=C;DP=108     GT:GQ:DP        1|1:74:23       1|1:83:27       1|1:100:45
+4      46902022        rs7684997       A       G       .       PASS    AA=G;DP=105     GT:GQ:DP        1|1:74:23       1|1:83:28       1|1:100:56
+12     104843678       rs4620812       T       G       .       PASS    AA=G;DP=133     GT:GQ:DP        1|1:74:23       1|1:83:28       1|1:100:81
+18     68829770        rs2469064       T       C       .       PASS    AA=t;DP=116     GT:GQ:DP        1|1:74:23       1|1:85:34       1|1:100:60
+13     67685303        rs1036102       C       T       .       PASS    AA=T;DP=110     GT:GQ:DP        1|1:74:23       1|1:86:27       1|1:100:58
+5      67125535        rs6449923       A       G       .       PASS    AA=A;DP=111     GT:GQ:DP        1|1:74:23       1|1:86:27       1|1:100:65
+3      173114745       rs4894785       C       G       .       PASS    AA=G;DP=107     GT:GQ:DP        1|1:74:23       1|1:86:29       1|1:100:56
+16     69900417        rs8052756       T       C       .       PASS    AA=C;DP=146     GT:GQ:DP        1|1:74:23       1|1:89:28       1|1:100:46
+12     32193700        rs2630575       A       T       .       PASS    AA=T;DP=111     GT:GQ:DP        1|1:74:23       1|1:89:28       1|1:100:61
+7      155403049       rs4716927       G       C       .       PASS    AA=C;DP=119     GT:GQ:DP        1|1:74:23       1|1:89:28       1|1:100:68
+7      20338465        rs206200        G       C       .       PASS    AA=C;DP=129     GT:GQ:DP        1|1:74:23       1|1:89:28       1|1:100:79
+10     84651257        rs2483303       G       A       .       PASS    AA=A;DP=134     GT:GQ:DP        1|1:74:23       1|1:89:28       1|1:100:82
+5      76700977        rs10061629      C       T       .       PASS    AA=T;DP=115     GT:GQ:DP        1|1:74:23       1|1:91:30       1|1:100:65
+3      21806190        rs2336052       C       T       .       PASS    AA=T;DP=93      GT:GQ:DP        1|1:74:23       1|1:92:29       1|1:100:42
+6      45343162        rs4437465       C       T       .       PASS    AA=T;DP=107     GT:GQ:DP        1|1:74:23       1|1:92:30       1|1:100:54
+6      78689489        rs4598029       C       G       .       PASS    AA=G;DP=111     GT:GQ:DP        1|1:74:23       1|1:95:30       1|1:100:57
+3      193733685       rs7653301       A       G       .       PASS    AA=G;DP=115     GT:GQ:DP        1|1:74:23       1|1:95:30       1|1:100:62
+5      164390953       rs10037133      T       A       .       PASS    AA=A;DP=133     GT:GQ:DP        1|1:74:23       1|1:95:30       1|1:100:84
+9      81880673        rs10780352      A       G       .       PASS    AA=A;DP=135     GT:GQ:DP        1|1:74:23       1|1:98:31       1|1:100:80
+6      29932246        rs3128908       A       G       .       PASS    AA=.;DP=110     GT:GQ:DP        1|1:74:24       1|1:100:35      1|1:100:40
+5      121299209       rs10477626      G       A       .       PASS    AA=A;DP=118     GT:GQ:DP        1|1:74:24       1|1:100:40      1|1:100:57
+8      112191723       rs1365729       C       A       .       PASS    AA=A;DP=70      GT:GQ:DP        1|1:74:24       1|1:16:14       1|1:100:32
+1      13873605        rs4662010       C       T       .       PASS    AA=C;DP=87;HM2;HM3      GT:GQ:DP        1|1:74:24       1|1:18:15       1|1:100:37
+4      138745959       rs10015710      A       G       .       PASS    AA=G;DP=87      GT:GQ:DP        1|1:74:24       1|1:18:15       1|1:100:51
+19     63634889        rs8108766       G       A       .       PASS    AA=G;DP=123     GT:GQ:DP        1|1:74:24       1|1:21:22       1|1:100:70
+4      14820328        rs11942872      A       G       .       PASS    AA=A;DP=94      GT:GQ:DP        1|1:74:24       1|1:27:18       1|1:100:53
+12     97028970        rs10860288      T       C       .       PASS    AA=C;DP=121     GT:GQ:DP        1|1:74:24       1|1:27:18       1|1:100:75
+19     1618625 rs10423516      T       G       .       PASS    AA=G;DP=80      GT:GQ:DP        1|1:74:24       1|1:32:9        1|1:100:39
+13     26068449        rs7324501       T       A       .       PASS    AA=A;DP=84      GT:GQ:DP        1|1:74:24       1|1:34:23       1|1:70:27
+11     133166766       rs7107654       A       G       .       PASS    AA=A;DP=105     GT:GQ:DP        1|1:74:24       1|1:35:10       1|1:100:71
+12     91493486        rs1030810       A       C       .       PASS    AA=C;DP=98      GT:GQ:DP        1|1:74:24       1|1:35:16       1|1:100:57
+21     40458085        rs760174        A       G       .       PASS    AA=G;DP=116     GT:GQ:DP        1|1:74:24       1|1:35:21       1|1:100:71
+9      115430065       rs589972        A       G       .       PASS    AA=N;DP=67      GT:GQ:DP        1|1:74:24       1|1:38:12       1|1:98:20
+8      21262467        rs7003005       C       T       .       PASS    AA=T;DP=130     GT:GQ:DP        1|1:74:24       1|1:41:12       1|1:100:51
+3      139713098       rs3884240       A       G       .       PASS    AA=G;DP=93      GT:GQ:DP        1|1:74:24       1|1:41:14       1|1:100:55
+6      20986658        rs9358375       C       T       .       PASS    AA=T;DP=101     GT:GQ:DP        1|1:74:24       1|1:41:15       1|1:100:60
+4      170762441       rs4323068       A       G       .       PASS    AA=G;DP=101     GT:GQ:DP        1|1:74:24       1|1:43:18       1|1:100:60
+9      546082  rs7031553       C       G       .       PASS    AA=G;DP=79      GT:GQ:DP        1|1:74:24       1|1:44:13       1|1:100:44
+19     62072795        rs10423226      T       G       .       PASS    AA=G;DP=111     GT:GQ:DP        1|1:74:24       1|1:44:13       1|1:100:72
+1      115263073       rs360578        G       A       .       PASS    AA=-;DP=79      GT:GQ:DP        1|1:74:24       1|1:44:14       1|1:100:33
+13     29241360        rs4611301       T       C       .       PASS    AA=T;DP=102     GT:GQ:DP        1|1:74:24       1|1:46:25       1|1:100:53
+2      154442717       rs1444685       A       C       .       PASS    AA=C;DP=78      GT:GQ:DP        1|1:74:24       1|1:47:15       1|1:100:28
+9      104685647       rs1418779       C       T       .       PASS    AA=T;DP=99      GT:GQ:DP        1|1:74:24       1|1:47:15       1|1:100:60
+9      81623952        rs4877513       A       G       .       PASS    AA=G;DP=105     GT:GQ:DP        1|1:74:24       1|1:47:15       1|1:100:65
+4      148402737       rs10014781      G       A       .       PASS    AA=g;DP=69      GT:GQ:DP        1|1:74:24       1|1:50:15       1|1:100:26
+18     41613925        rs7506509       T       C       .       PASS    AA=C;DP=96      GT:GQ:DP        1|1:74:24       1|1:50:15       1|1:100:45
+6      161914356       rs9295155       A       G       .       PASS    AA=A;DP=87      GT:GQ:DP        1|1:74:24       1|1:50:15       1|1:100:48
+5      6661877 rs484418        A       G       .       PASS    AA=G;DP=94      GT:GQ:DP        1|1:74:24       1|1:50:15       1|1:100:50
+1      71451523        rs2639333       G       A       .       PASS    AA=G;DP=102;HM2 GT:GQ:DP        1|1:74:24       1|1:50:15       1|1:100:64
+18     20382615        rs9304464       T       C       .       PASS    AA=C;DP=92      GT:GQ:DP        1|1:74:24       1|1:50:16       1|1:100:40
+15     61721272        rs8027262       G       A       .       PASS    AA=A;DP=82      GT:GQ:DP        1|1:74:24       1|1:53:16       1|1:100:37
+3      108169606       rs1709957       T       A       .       PASS    AA=A;DP=101     GT:GQ:DP        1|1:74:24       1|1:53:16       1|1:100:65
+4      182566450       rs6826440       G       A       .       PASS    AA=A;DP=90      GT:GQ:DP        1|1:74:24       1|1:53:18       1|1:100:44
+13     87576910        rs2346844       T       C       .       PASS    AA=C;DP=110     GT:GQ:DP        1|1:74:24       1|1:54:25       1|1:100:60
+12     79613382        rs1163284       A       G       .       PASS    AA=N;DP=93      GT:GQ:DP        1|1:74:24       1|1:56:17       1|1:100:53
+4      148457650       rs1981987       C       G       .       PASS    AA=G;DP=96      GT:GQ:DP        1|1:74:24       1|1:56:17       1|1:100:55
+15     51947016        rs982211        T       C       .       PASS    AA=C;DP=107     GT:GQ:DP        1|1:74:24       1|1:56:18       1|1:100:63
+5      99924523        rs247939        A       G       .       PASS    AA=G;DP=98      GT:GQ:DP        1|1:74:24       1|1:56:19       1|1:100:47
+17     71328532        rs6501836       G       A       .       PASS    AA=A;DP=94      GT:GQ:DP        1|1:74:24       1|1:59:18       1|1:100:53
+7      145920720       rs402278        A       G       .       PASS    AA=G;DP=96      GT:GQ:DP        1|1:74:24       1|1:59:18       1|1:100:54
+4      128609232       rs6841658       T       C       .       PASS    AA=C;DP=126     GT:GQ:DP        1|1:74:24       1|1:59:18       1|1:100:69
+14     67212927        rs6573791       T       C       .       PASS    AA=t;DP=94      GT:GQ:DP        1|1:74:24       1|1:59:19       1|1:100:45
+12     56759132        rs2659638       A       G       .       PASS    AA=G;DP=117     GT:GQ:DP        1|1:74:24       1|1:59:19       1|1:100:71
+7      82170482        rs4141003       T       C       .       PASS    AA=A;DP=112     GT:GQ:DP        1|1:74:24       1|1:59:19       1|1:100:71
+17     51066592        rs1506591       G       C       .       PASS    AA=C;DP=103     GT:GQ:DP        1|1:74:24       1|1:59:20       1|1:100:59
+3      165233684       rs12629819      A       G       .       PASS    AA=A;DP=110     GT:GQ:DP        1|1:74:24       1|1:59:20       1|1:100:65
+3      151439980       rs6775092       G       C       .       PASS    AA=C;DP=103     GT:GQ:DP        1|1:74:24       1|1:62:19       1|1:100:61
+10     24266832        rs1938053       C       G       .       PASS    AA=G;DP=111     GT:GQ:DP        1|1:74:24       1|1:65:20       1|1:100:67
+3      70972013        rs11927771      C       G       .       PASS    AA=G;DP=118     GT:GQ:DP        1|1:74:24       1|1:65:25       1|1:100:73
+1      187894633       rs501912        A       T       .       PASS    AA=A;DP=101     GT:GQ:DP        1|1:74:24       1|1:68:21       1|1:100:55
+5      4888205 rs816480        G       A       .       PASS    AA=g;DP=118     GT:GQ:DP        1|1:74:24       1|1:68:21       1|1:100:74
+5      104971730       rs6596635       G       C       .       PASS    AA=C;DP=88      GT:GQ:DP        1|1:74:24       1|1:68:23       1|1:100:41
+8      132443065       rs13264125      T       A       .       PASS    AA=A;DP=101     GT:GQ:DP        1|1:74:24       1|1:68:23       1|1:100:53
+8      68687837        rs7814309       C       T       .       PASS    AA=T;DP=125     GT:GQ:DP        1|1:74:24       1|1:70:22       1|1:100:35
+4      131718790       rs2169029       C       G       .       PASS    AA=G;DP=90      GT:GQ:DP        1|1:74:24       1|1:71:22       1|1:100:30
+1      81148164        rs1338133       G       A       .       PASS    AA=a;DP=93;HM2;HM3      GT:GQ:DP        1|1:74:24       1|1:71:22       1|1:100:49
+9      22586091        rs4403495       T       G       .       PASS    AA=G;DP=122     GT:GQ:DP        1|1:74:24       1|1:72:30       1|1:100:67
+1      5058717 rs9803863       G       A       .       PASS    AA=A;DP=107;HM2 GT:GQ:DP        1|1:74:24       1|1:74:23       1|1:100:59
+9      70841779        rs2498419       G       A       .       PASS    AA=A;DP=127     GT:GQ:DP        1|1:74:24       1|1:74:23       1|1:100:80
+2      173395959       rs2468393       T       C       .       PASS    AA=C;DP=138     GT:GQ:DP        1|1:74:24       1|1:74:23       1|1:100:90
+14     36286105        rs1160547       A       G       .       PASS    AA=A;DP=102     GT:GQ:DP        1|1:74:24       1|1:74:24       1|1:100:41
+11     130587162       rs2511499       T       C       .       PASS    AA=N;DP=94      GT:GQ:DP        1|1:74:24       1|1:77:24       1|1:100:36
+4      98620315        rs11947563      T       C       .       PASS    AA=T;DP=117     GT:GQ:DP        1|1:74:24       1|1:77:24       1|1:100:68
+21     24388607        rs4322919       G       C       .       PASS    AA=G;DP=123     GT:GQ:DP        1|1:74:24       1|1:77:25       1|1:100:67
+16     72844886        rs1424085       A       G       .       PASS    AA=G;DP=109     GT:GQ:DP        1|1:74:24       1|1:77:27       1|1:100:58
+17     13265511        rs4792360       G       C       .       PASS    AA=C;DP=126     GT:GQ:DP        1|1:74:24       1|1:78:30       1|1:100:72
+5      127197735       rs151885        A       G       .       PASS    AA=G;DP=114     GT:GQ:DP        1|1:74:24       1|1:79:31       1|1:100:60
+6      49750124        rs1570064       G       A       .       PASS    AA=A;DP=94      GT:GQ:DP        1|1:74:24       1|1:80:25       1|1:100:45
+10     119065731       rs2532838       A       C       .       PASS    AA=A;DP=111     GT:GQ:DP        1|1:74:24       1|1:80:26       1|1:100:61
+3      55364195        rs6807233       A       G       .       PASS    AA=G;DP=126     GT:GQ:DP        1|1:74:24       1|1:80:27       1|1:100:76
+3      100555696       rs2464142       A       G       .       PASS    AA=G;DP=150     GT:GQ:DP        1|1:74:24       1|1:80:30       1|1:100:54
+4      20501626        rs6447995       G       A       .       PASS    AA=A;DP=123     GT:GQ:DP        1|1:74:24       1|1:85:33       1|1:100:63
+4      100027716       rs1813867       T       C       .       PASS    AA=C;DP=130     GT:GQ:DP        1|1:74:24       1|1:86:27       1|1:100:72
+13     74401864        rs242453        A       T       .       PASS    AA=T;DP=92      GT:GQ:DP        1|1:74:24       1|1:86:28       1|1:100:40
+12     127946376       rs7310927       A       G       .       PASS    AA=G;DP=125     GT:GQ:DP        1|1:74:24       1|1:92:29       1|1:100:69
+19     56872738        rs12980971      C       G       .       PASS    AA=C;DP=142     GT:GQ:DP        1|1:74:25       1|1:100:38      1|1:100:79
+2      124497728       rs1561461       A       C       .       PASS    AA=C;DP=111     GT:GQ:DP        1|1:74:25       1|1:38:22       1|1:100:60
+12     53608562        rs7966034       G       C       .       PASS    AA=C;DP=90      GT:GQ:DP        1|1:74:25       1|1:40:20       1|1:100:29
+8      139966542       rs7814168       A       G       .       PASS    AA=G;DP=107     GT:GQ:DP        1|1:74:25       1|1:42:22       1|1:100:61
+7      94486175        rs11981513      G       A       .       PASS    AA=A;DP=90      GT:GQ:DP        1|1:74:25       1|1:49:22       1|1:100:42
+12     127444174       rs7133077       G       A       .       PASS    AA=A;DP=113     GT:GQ:DP        1|1:74:25       1|1:49:22       1|1:100:65
+5      116380376       rs3900640       A       G       .       PASS    AA=G;DP=82      GT:GQ:DP        1|1:74:25       1|1:50:16       1|1:100:42
+10     52855084        rs293328        A       G       .       PASS    AA=a;DP=97      GT:GQ:DP        1|1:74:25       1|1:50:16       1|1:100:56
+5      52821468        rs9292020       C       T       .       PASS    AA=T;DP=107     GT:GQ:DP        1|1:74:25       1|1:50:16       1|1:100:69
+3      144569642       rs1604377       C       G       .       PASS    AA=G;DP=91      GT:GQ:DP        1|1:74:25       1|1:50:20       1|1:100:47
+8      3778896 rs2554656       G       C       .       PASS    AA=C;DP=102     GT:GQ:DP        1|1:74:25       1|1:59:18       1|1:100:57
+7      137160507       rs10257218      C       T       .       PASS    AA=T;DP=101     GT:GQ:DP        1|1:74:25       1|1:62:19       1|1:100:58
+8      39022548        rs7833803       G       T       .       PASS    AA=T;DP=110     GT:GQ:DP        1|1:74:25       1|1:65:24       1|1:100:56
+4      179509607       rs2666070       A       G       .       PASS    AA=A;DP=78      GT:GQ:DP        1|1:74:25       1|1:68:21       1|1:100:23
+4      76354989        rs1497212       A       G       .       PASS    AA=G;DP=102     GT:GQ:DP        1|1:74:25       1|1:68:21       1|1:100:55
+1      245061529       rs10924852      A       G       .       PASS    AA=A;DP=116;HM3 GT:GQ:DP        1|1:74:25       1|1:68:23       1|1:100:69
+1      72226999        rs6658032       G       C       .       PASS    AA=C;DP=98;HM2  GT:GQ:DP        1|1:74:25       1|1:71:23       1|1:100:50
+3      179838414       rs1382044       T       C       .       PASS    AA=C;DP=135     GT:GQ:DP        1|1:74:25       1|1:86:29       1|1:100:79
+15     88569160        rs1040083       A       G       .       PASS    AA=a;DP=97      GT:GQ:DP        1|1:74:26       1|0:3:10        1|1:100:51
+3      97175756        rs12633936      T       C       .       PASS    AA=C;DP=98      GT:GQ:DP        1|1:74:26       1|1:44:13       1|1:100:59
+15     77818565        rs408046        A       G       .       PASS    AA=G;DP=96      GT:GQ:DP        1|1:74:26       1|1:50:15       1|1:100:43
+13     58612536        rs7323019       T       C       .       PASS    AA=C;DP=86      GT:GQ:DP        1|1:74:26       1|1:53:16       1|1:100:33
+4      112622271       rs3105285       T       C       .       PASS    AA=C;DP=113     GT:GQ:DP        1|1:74:26       1|1:65:22       1|1:100:58
+22     31985489        rs1012492       C       T       .       PASS    AA=T;DP=118     GT:GQ:DP        1|1:74:26       1|1:95:34       1|1:100:59
+2      68834273        rs4316972       G       A       .       PASS    AA=A;DP=110     GT:GQ:DP        1|1:74:27       0|1:5:21        1|0:100:63
+20     4511033 rs2326537       A       T       .       PASS    AA=T;DP=116     GT:GQ:DP        1|1:74:27       1|1:65:20       1|1:100:70
+5      98063518        rs456367        A       T       .       PASS    AA=T;DP=133     GT:GQ:DP        1|1:74:29       0|0:78:26       1|0:100:79
+20     46964652        rs6019518       A       G       .       PASS    AA=A;DP=89      GT:GQ:DP        1|1:74:29       1|1:35:10       1|1:100:52
+10     33425952        rs2666257       T       G       .       PASS    AA=T;DP=109     GT:GQ:DP        1|1:74:29       1|1:46:25       1|1:100:56
+17     37885219        rs11079048      T       G       .       PASS    AA=G;DP=112     GT:GQ:DP        1|1:74:29       1|1:71:22       1|1:100:61
+21     40258906        rs978935        G       T       .       PASS    AA=T;DP=114     GT:GQ:DP        1|1:74:29       1|1:80:25       1|1:100:60
+9      88999175        rs278691        T       C       .       PASS    AA=C;DP=128     GT:GQ:DP        1|1:74:29       1|1:86:28       1|1:100:68
+12     44666428        rs1366023       A       G       .       PASS    AA=G;DP=119     GT:GQ:DP        1|1:74:29       1|1:89:28       1|1:100:61
+5      71783675        rs2879093       A       G       .       PASS    AA=G;DP=125     GT:GQ:DP        1|1:74:30       1|1:43:18       1|1:100:77
+9      96001941        rs7851345       T       C       .       PASS    AA=T;DP=161     GT:GQ:DP        1|1:74:31       0|1:87:25       1|0:100:56
+6      9959946 rs1934773       G       A       .       PASS    AA=G;DP=138     GT:GQ:DP        1|1:74:31       1|1:68:21       1|1:100:85
+1      155671562       rs4590665       T       A       .       PASS    AA=A;DP=128     GT:GQ:DP        1|1:74:31       1|1:77:26       1|1:100:70
+7      11981426        rs9632573       G       T       .       PASS    AA=T;DP=92      GT:GQ:DP        1|1:74:32       0|0:48:16       1|0:100:44
+1      70959302        rs2782788       A       G       .       PASS    AA=A;DP=125;HM2;HM3     GT:GQ:DP        1|1:74:32       0|1:100:25      1|0:100:69
+22     37562405        rs2103514       T       C       .       PASS    AA=C;DP=143     GT:GQ:DP        1|1:74:32       1|0:83:17       1|1:100:92
+12     6824885 rs2301339       G       A       .       PASS    AA=A;DP=82      GT:GQ:DP        1|1:74:32       1|1:29:8        1|1:100:34
+3      20571248        rs4858227       T       G       .       PASS    AA=g;DP=100     GT:GQ:DP        1|1:74:32       1|1:41:23       1|1:100:45
+10     97045822        rs10786197      G       A       .       PASS    AA=A;DP=132     GT:GQ:DP        1|1:74:32       1|1:62:20       1|1:100:83
+3      126422158       rs11920319      G       A       .       PASS    AA=G;DP=146     GT:GQ:DP        1|1:74:33       0|0:72:26       1|0:100:89
+1      85359695        rs1026467       C       G       .       PASS    AA=G;DP=140;HM2 GT:GQ:DP        1|1:74:33       0|1:51:26       1|0:100:80
+10     31836812        rs11008511      T       A       .       PASS    AA=T;DP=100     GT:GQ:DP        1|1:74:34       0|0:45:15       1|0:100:52
+6      147191317       .       C       A       .       PASS    AA=C;DP=106     GT:GQ:DP        1|1:74:34       1|0:88:17       1|1:100:44
+2      132880133       rs10928394      A       G       .       PASS    AA=N;DP=107     GT:GQ:DP        1|1:74:34       1|0:99:20       1|1:100:52
+21     41322788        rs9305717       T       C       .       PASS    AA=C;DP=125     GT:GQ:DP        1|1:74:34       1|1:86:27       1|1:100:67
+1      182630460       rs6424950       T       C       .       PASS    AA=C;DP=149;HM2;HM3     GT:GQ:DP        1|1:74:36       1|0:100:32      1|1:100:79
+7      35412925        rs1895005       G       A       .       PASS    AA=G;DP=132     GT:GQ:DP        1|1:74:36       1|0:100:43      1|1:100:53
+18     46139815        .       T       C       .       PASS    AA=C;DP=142     GT:GQ:DP        1|1:74:38       0|0:55:25       1|0:100:83
+14     55350364        rs7157979       T       G       .       PASS    AA=G;DP=135     GT:GQ:DP        1|1:74:38       0|0:69:23       1|0:100:76
+3      157217072       rs7649065       C       T       .       PASS    AA=T;DP=145     GT:GQ:DP        1|1:74:38       0|0:93:32       1|0:100:74
+20     35910894        rs6512731       C       A       .       PASS    AA=A;DP=128     GT:GQ:DP        1|1:74:38       1|1:71:22       1|1:100:67
+5      60071177        rs6887434       C       G       .       PASS    AA=G;DP=141     GT:GQ:DP        1|1:74:43       1|0:57:25       1|1:100:62
+3      95541430        rs1907645       C       T       .       PASS    AA=C;DP=96      GT:GQ:DP        1|1:75:24       1|1:5:23        1|1:100:47
+1      170006562       rs35738870      A       G       .       PASS    AA=G;DP=98      GT:GQ:DP        1|1:75:25       1|0:100:15      1|1:100:56
+4      155621198       rs1388079       C       A       .       PASS    AA=A;DP=106     GT:GQ:DP        1|1:75:25       1|0:100:17      1|1:100:66
+6      120447237       rs58194086      A       T       .       PASS    AA=A;DP=81      GT:GQ:DP        1|1:75:25       1|0:100:19      1|1:47:36
+13     70198042        rs2586125       C       A       .       PASS    AA=A;DP=74      GT:GQ:DP        1|1:75:25       1|0:100:19      1|1:63:21
+3      85026426        rs1691501       C       T       .       PASS    AA=T;DP=81      GT:GQ:DP        1|1:75:25       1|0:100:19      1|1:81:27
+5      153090371       rs6580030       A       G       .       PASS    AA=A;DP=94      GT:GQ:DP        1|1:75:25       1|0:100:20      1|1:100:50
+18     41065568        rs11082433      T       A       .       PASS    AA=t;DP=115     GT:GQ:DP        1|1:75:25       1|0:100:20      1|1:100:60
+14     63238590        rs7156468       C       A       .       PASS    AA=A;DP=106     GT:GQ:DP        1|1:75:25       1|0:100:20      1|1:100:63
+9      30995145        rs7858823       G       T       .       PASS    AA=G;DP=97      GT:GQ:DP        1|1:75:25       1|0:100:20      1|1:78:42
+6      84592693        rs34875273      T       A       .       PASS    AA=T;DP=86      GT:GQ:DP        1|1:75:25       1|0:100:22      1|1:100:38
+11     97706884        rs4754499       A       G       .       PASS    AA=A;DP=103     GT:GQ:DP        1|1:75:25       1|0:100:22      1|1:100:58
+18     47470413        rs1613017       T       A       .       PASS    AA=A;DP=104     GT:GQ:DP        1|1:75:25       1|0:100:22      1|1:100:58
+13     98232811        rs8000794       C       G       .       PASS    AA=G;DP=121     GT:GQ:DP        1|1:75:25       1|0:100:22      1|1:100:75
+4      67448600        rs59977283      C       G       .       PASS    AA=C;DP=106     GT:GQ:DP        1|1:75:25       1|0:100:23      1|1:100:58
+4      141021126       rs2320536       C       T       .       PASS    AA=T;DP=121     GT:GQ:DP        1|1:75:25       1|0:100:23      1|1:100:68
+2      180022240       rs6757845       T       C       .       PASS    AA=t;DP=108     GT:GQ:DP        1|1:75:25       1|0:100:24      1|1:100:58
+8      56975196        rs1980042       A       G       .       PASS    AA=G;DP=109     GT:GQ:DP        1|1:75:25       1|0:100:24      1|1:100:61
+4      110149827       rs28435280      C       T       .       PASS    AA=T;DP=87      GT:GQ:DP        1|1:75:25       1|0:100:24      1|1:79:39
+11     83373781        rs2062208       C       A       .       PASS    AA=C;DP=106     GT:GQ:DP        1|1:75:25       1|0:100:25      1|1:100:56
+8      62490696        rs1822032       T       G       .       PASS    AA=G;DP=118     GT:GQ:DP        1|1:75:25       1|0:100:25      1|1:100:68
+3      74654093        rs7434202       T       C       .       PASS    AA=T;DP=124     GT:GQ:DP        1|1:75:25       1|0:100:25      1|1:100:72
+1      246643078       rs6685288       T       C       .       PASS    AA=N;DP=121;HM2 GT:GQ:DP        1|1:75:25       1|0:100:25      1|1:100:73
+1      168618778       rs3119903       T       C       .       PASS    AA=C;DP=92      GT:GQ:DP        1|1:75:25       1|0:100:25      1|1:93:43
+1      79485595        .       G       A       .       PASS    AA=A;DP=113     GT:GQ:DP        1|1:75:25       1|0:100:26      1|1:100:52
+14     79526285        rs6574539       C       T       .       PASS    AA=T;DP=114     GT:GQ:DP        1|1:75:25       1|0:100:26      1|1:100:65
+3      9120554 rs382196        G       T       .       PASS    AA=G;DP=135     GT:GQ:DP        1|1:75:25       1|0:100:28      1|1:100:81
+8      140521704       rs2468714       A       C       .       PASS    AA=C;DP=120     GT:GQ:DP        1|1:75:25       1|0:100:29      1|1:100:67
+1      39063420        rs1320455       T       A       .       PASS    AA=A;DP=132     GT:GQ:DP        1|1:75:25       1|0:100:29      1|1:100:77
+1      158465160       rs11265360      T       G       .       PASS    AA=T;DP=112;HM2 GT:GQ:DP        1|1:75:25       1|0:100:30      1|1:82:57
+5      46219107        rs8185101       A       G       .       PASS    AA=.;DP=114     GT:GQ:DP        1|1:75:25       1|0:100:32      1|1:100:57
+3      1237681 rs9832892       G       C       .       PASS    AA=G;DP=116     GT:GQ:DP        1|1:75:25       1|0:100:32      1|1:100:59
+18     45476306        rs8094850       C       A       .       PASS    AA=C;DP=97      GT:GQ:DP        1|1:75:25       1|0:38:14       1|1:100:57
+8      139847184       rs11166842      C       A       .       PASS    AA=A;DP=115     GT:GQ:DP        1|1:75:25       1|0:42:23       1|1:100:66
+15     22985005        rs2714767       A       G       .       PASS    AA=-;DP=85      GT:GQ:DP        1|1:75:25       1|0:45:10       1|1:100:44
+2      155568810       rs1482304       T       C       .       PASS    AA=T;DP=73      GT:GQ:DP        1|1:75:25       1|0:50:10       1|1:98:38
+5      14800247        rs875525        C       T       .       PASS    AA=T;DP=101     GT:GQ:DP        1|1:75:25       1|0:62:17       1|1:100:62
+11     108167194       rs2061680       C       A       .       PASS    AA=A;DP=91      GT:GQ:DP        1|1:75:25       1|0:64:22       1|1:100:44
+5      163197107       rs10057713      G       A       .       PASS    AA=A;DP=114     GT:GQ:DP        1|1:75:25       1|0:67:19       1|1:100:74
+13     73323229        rs9543476       G       T       .       PASS    AA=T;DP=101     GT:GQ:DP        1|1:75:25       1|0:68:17       1|1:100:57
+6      144748896       rs9496950       T       G       .       PASS    AA=G;DP=107     GT:GQ:DP        1|1:75:25       1|0:70:24       1|1:100:60
+8      5028825 rs6989820       C       T       .       PASS    AA=T;DP=103     GT:GQ:DP        1|1:75:25       1|0:71:20       1|1:100:56
+2      68455491        rs1016349       G       A       .       PASS    AA=A;DP=81      GT:GQ:DP        1|1:75:25       1|0:76:16       1|1:100:34
+8      70727807        rs7813987       C       T       .       PASS    AA=T;DP=127     GT:GQ:DP        1|1:75:25       1|0:77:17       1|1:100:86
+8      142102261       rs2369412       C       A       .       PASS    AA=A;DP=100     GT:GQ:DP        1|1:75:25       1|0:79:13       1|1:63:62
+12     106061773       rs4964524       G       A       .       PASS    AA=A;DP=125     GT:GQ:DP        1|1:75:25       1|0:80:21       1|1:100:77
+3      178786870       rs7620560       G       A       .       PASS    AA=A;DP=104     GT:GQ:DP        1|1:75:25       1|0:94:19       1|1:100:62
+10     122920935       rs11199812      G       A       .       PASS    AA=G;DP=121     GT:GQ:DP        1|1:75:25       1|0:94:21       1|1:100:76
+16     73613019        rs4887801       G       T       .       PASS    AA=G;DP=109     GT:GQ:DP        1|1:75:25       1|0:96:16       1|1:100:71
+17     43568487        rs8079616       C       T       .       PASS    AA=T;DP=117     GT:GQ:DP        1|1:75:25       1|1:77:25       1|1:100:70
+7      11821852        rs10239911      A       G       .       PASS    AA=G;DP=89      GT:GQ:DP        1|1:75:26       0|1:100:17      1|0:100:46
+5      143456903       rs12189071      A       G       .       PASS    AA=G;DP=96      GT:GQ:DP        1|1:75:26       0|1:100:19      1|0:100:53
+11     18933348        rs2403357       T       C       .       PASS    AA=C;DP=107     GT:GQ:DP        1|1:75:26       0|1:100:20      1|0:100:57
+1      210362194       rs6690208       C       T       .       PASS    AA=C;DP=106;HM2;HM3     GT:GQ:DP        1|1:75:26       0|1:100:21      1|0:100:55
+10     29880572        rs2887238       G       A       .       PASS    AA=A;DP=135     GT:GQ:DP        1|1:75:26       0|1:100:21      1|0:100:88
+1      173349599       rs7536504       C       A       .       PASS    AA=C;DP=85      GT:GQ:DP        1|1:75:26       0|1:100:22      1|0:100:38
+4      14056469        rs2215526       A       G       .       PASS    AA=G;DP=104     GT:GQ:DP        1|1:75:26       0|1:100:22      1|0:100:58
+10     95460077        rs7919090       T       C       .       PASS    AA=C;DP=110     GT:GQ:DP        1|1:75:26       0|1:100:23      1|0:100:62
+1      225468683       rs12402456      G       A       .       PASS    AA=G;DP=115;HM2 GT:GQ:DP        1|1:75:26       0|1:100:23      1|0:100:64
+12     65198038        rs11838180      G       T       .       PASS    AA=G;DP=123     GT:GQ:DP        1|1:75:26       0|1:100:23      1|0:100:71
+3      65527054        rs6799284       G       A       .       PASS    AA=g;DP=122     GT:GQ:DP        1|1:75:26       0|1:100:23      1|0:100:73
+7      136342216       rs324644        C       T       .       PASS    AA=T;DP=105     GT:GQ:DP        1|1:75:26       0|1:100:24      1|0:100:56
+6      24659603        rs2076313       A       G       .       PASS    AA=G;DP=109     GT:GQ:DP        1|1:75:26       0|1:100:24      1|0:100:61
+9      108794614       rs7865611       C       T       .       PASS    AA=T;DP=111     GT:GQ:DP        1|1:75:26       0|1:100:24      1|0:100:63
+6      48741500        rs243124        T       A       .       PASS    AA=A;DP=119     GT:GQ:DP        1|1:75:26       0|1:100:25      1|0:100:70
+2      169535909       rs10184334      C       T       .       PASS    AA=T;DP=117     GT:GQ:DP        1|1:75:26       0|1:100:26      1|0:100:65
+3      80509258        rs949455        A       C       .       PASS    AA=C;DP=126     GT:GQ:DP        1|1:75:26       0|1:100:26      1|0:100:74
+2      221504886       rs660528        C       T       .       PASS    AA=C;DP=146     GT:GQ:DP        1|1:75:26       0|1:100:26      1|0:100:92
+3      86843760        rs9850360       A       T       .       PASS    AA=T;DP=109     GT:GQ:DP        1|1:75:26       0|1:100:27      1|0:100:56
+6      169346083       rs7771838       C       T       .       PASS    AA=C;DP=100     GT:GQ:DP        1|1:75:26       0|1:100:28      1|0:100:35
+11     87126030        rs7929188       A       T       .       PASS    AA=T;DP=130     GT:GQ:DP        1|1:75:26       0|1:100:28      1|0:100:74
+10     11137618        rs1291832       A       G       .       PASS    AA=G;DP=140     GT:GQ:DP        1|1:75:26       0|1:100:29      1|0:100:44
+12     10028526        rs684134        G       A       .       PASS    AA=G;DP=122     GT:GQ:DP        1|1:75:26       0|1:100:29      1|0:100:70
+2      167759387       rs988445        G       A       .       PASS    AA=A;DP=134     GT:GQ:DP        1|1:75:26       0|1:100:29      1|0:100:80
+4      154345448       rs10019436      T       C       .       PASS    AA=T;DP=141     GT:GQ:DP        1|1:75:26       0|1:100:30      1|0:100:86
+4      29515559        rs61794516      T       A       .       PASS    AA=N;DP=130     GT:GQ:DP        1|1:75:26       0|1:100:31      1|0:100:73
+1      6506688 rs4908558       A       G       .       PASS    AA=A;DP=151;HM2 GT:GQ:DP        1|1:75:26       0|1:100:32      1|0:100:48
+13     29765690        rs6490452       T       A       .       PASS    AA=A;DP=129     GT:GQ:DP        1|1:75:26       0|1:100:33      1|0:100:69
+8      117009377       rs57089802      G       A       .       PASS    AA=G;DP=127     GT:GQ:DP        1|1:75:26       0|1:100:38      1|0:100:62
+21     31241597        rs12627354      A       G       .       PASS    AA=G;DP=149     GT:GQ:DP        1|1:75:26       0|1:27:18       1|0:100:86
+4      35158233        rs4859362       T       C       .       PASS    AA=C;DP=109     GT:GQ:DP        1|1:75:26       0|1:30:19       1|0:100:58
+2      167157278       rs12473156      T       C       .       PASS    AA=C;DP=107     GT:GQ:DP        1|1:75:26       0|1:31:23       1|0:100:58
+8      6709237 rs2702840       C       G       .       PASS    AA=.;DP=142     GT:GQ:DP        1|1:75:26       0|1:34:20       1|0:100:45
+4      123165017       rs9284635       T       G       .       PASS    AA=G;DP=116     GT:GQ:DP        1|1:75:26       0|1:35:17       1|0:100:73
+6      14166385        rs9349930       A       T       .       PASS    AA=T;DP=117     GT:GQ:DP        1|1:75:26       0|1:41:12       1|0:100:82
+8      52801486        rs7823895       C       A       .       PASS    AA=C;DP=122     GT:GQ:DP        1|1:75:26       0|1:42:20       1|0:100:78
+17     14050275        rs4792445       A       G       .       PASS    AA=N;DP=94      GT:GQ:DP        1|1:75:26       0|1:57:8        1|0:100:47
+1      202977409       rs12085502      A       G       .       PASS    AA=a;DP=99      GT:GQ:DP        1|1:75:26       0|1:59:21       1|0:100:49
+20     31135459        rs2424946       T       C       .       PASS    AA=C;DP=120     GT:GQ:DP        1|1:75:26       0|1:59:21       1|0:100:75
+9      11146999        rs10117447      A       C       .       PASS    AA=a;DP=87      GT:GQ:DP        1|1:75:26       0|1:63:12       1|0:44:49
+18     55862469        rs1984337       G       T       .       PASS    AA=T;DP=83      GT:GQ:DP        1|1:75:26       0|1:63:14       1|0:100:42
+16     13765609        rs2866848       C       T       .       PASS    AA=T;DP=118     GT:GQ:DP        1|1:75:26       0|1:63:19       1|0:100:75
+7      41124627        rs6463004       G       C       .       PASS    AA=C;DP=103     GT:GQ:DP        1|1:75:26       0|1:64:19       1|0:100:56
+10     33386703        rs2756018       C       G       .       PASS    AA=G;DP=123     GT:GQ:DP        1|1:75:26       0|1:68:16       1|0:100:80
+8      51719902        rs4367561       T       A       .       PASS    AA=a;DP=124     GT:GQ:DP        1|1:75:26       0|1:70:20       1|0:100:78
+5      106917059       rs352609        G       C       .       PASS    AA=C;DP=105     GT:GQ:DP        1|1:75:26       0|1:72:16       1|0:100:67
+20     117995  rs6040343       T       C       .       PASS    AA=.;DP=119     GT:GQ:DP        1|1:75:26       0|1:75:19       1|0:100:71
+18     53361196        rs17063854      G       A       .       PASS    AA=G;DP=124     GT:GQ:DP        1|1:75:26       0|1:76:21       1|0:100:79
+1      20691522        rs1152986       C       T       .       PASS    AA=C;DP=116;HM2;HM3     GT:GQ:DP        1|1:75:26       0|1:85:19       1|0:100:57
+4      158982053       rs988310        C       G       .       PASS    AA=C;DP=114     GT:GQ:DP        1|1:75:26       0|1:87:25       1|0:100:62
+2      88439866        rs3114960       C       T       .       PASS    AA=T;DP=120     GT:GQ:DP        1|1:75:26       0|1:89:21       1|0:100:73
+2      172906008       rs12996815      A       G       .       PASS    AA=a;DP=107     GT:GQ:DP        1|1:75:26       0|1:89:29       1|0:100:51
+7      36698575        rs6947739       A       G       .       PASS    AA=A;DP=95      GT:GQ:DP        1|1:75:26       0|1:91:15       1|0:100:55
+10     8731600 rs827411        C       A       .       PASS    AA=A;DP=73      GT:GQ:DP        1|1:75:26       0|1:91:17       1|0:21:19
+3      189088384       rs58036023      G       A       .       PASS    AA=A;DP=126     GT:GQ:DP        1|1:75:26       0|1:96:27       1|0:100:69
+5      132451868       rs7730747       G       A       .       PASS    AA=A;DP=117     GT:GQ:DP        1|1:75:26       1|0:100:18      1|1:100:72
+12     81921876        rs1655603       T       C       .       PASS    AA=C;DP=102     GT:GQ:DP        1|1:75:26       1|0:100:19      1|1:100:53
+8      17596894        rs423832        T       C       .       PASS    AA=C;DP=130     GT:GQ:DP        1|1:75:26       1|0:100:20      1|1:100:88
+4      33912713        rs34223717      A       G       .       PASS    AA=A;DP=103     GT:GQ:DP        1|1:75:26       1|0:100:21      1|1:100:57
+3      97353375        rs34896149      C       T       .       PASS    AA=C;DP=90      GT:GQ:DP        1|1:75:26       1|0:100:21      1|1:96:32
+1      119582991       rs10923777      A       T       .       PASS    AA=T;DP=115;HM2 GT:GQ:DP        1|1:75:26       1|0:100:22      1|1:100:67
+11     74213643        rs7121530       G       C       .       PASS    AA=C;DP=98      GT:GQ:DP        1|1:75:26       1|0:100:23      1|1:100:48
+2      51801608        rs2048847       T       A       .       PASS    AA=A;DP=103     GT:GQ:DP        1|1:75:26       1|0:100:23      1|1:100:50
+13     103502502       rs2669469       A       G       .       PASS    AA=G;DP=121     GT:GQ:DP        1|1:75:26       1|0:100:23      1|1:100:68
+22     35137708        rs28360544      C       T       .       PASS    AA=C;DP=144     GT:GQ:DP        1|1:75:26       1|0:100:23      1|1:100:95
+4      144364117       rs6856785       C       A       .       PASS    AA=A;DP=96      GT:GQ:DP        1|1:75:26       1|0:100:23      1|1:65:33
+2      50805588        rs858943        T       C       .       PASS    AA=T;DP=99      GT:GQ:DP        1|1:75:26       1|0:100:28      1|1:100:45
+8      84762309        rs9298409       G       A       .       PASS    AA=A;DP=110     GT:GQ:DP        1|1:75:26       1|0:100:30      1|1:100:53
+14     45253812        rs1266266       A       G       .       PASS    AA=G;DP=128     GT:GQ:DP        1|1:75:26       1|0:100:30      1|1:100:69
+2      76497882        rs4853244       G       C       .       PASS    AA=C;DP=121     GT:GQ:DP        1|1:75:26       1|0:38:19       1|1:100:73
+1      41670916        rs1892421       A       G       .       PASS    AA=N;DP=108;HM2 GT:GQ:DP        1|1:75:26       1|0:61:18       1|1:100:62
+13     74898296        rs9593074       A       G       .       PASS    AA=A;DP=81      GT:GQ:DP        1|1:75:26       1|0:81:18       1|1:93:37
+4      71381290        rs6826961       C       G       .       PASS    AA=C;DP=112     GT:GQ:DP        1|1:75:26       1|0:89:20       1|1:94:66
+2      34534510        rs1607642       C       T       .       PASS    AA=C;DP=96      GT:GQ:DP        1|1:75:26       1|0:91:13       1|1:100:58
+7      9625587 rs4720851       C       T       .       PASS    AA=C;DP=85      GT:GQ:DP        1|1:75:26       1|0:97:14       1|1:100:44
+1      150204679       rs6587635       T       C       .       PASS    AA=T;DP=97;HM2  GT:GQ:DP        1|1:75:27       0|1:100:18      1|0:100:52
+8      34293230        rs2719297       T       C       .       PASS    AA=C;DP=98      GT:GQ:DP        1|1:75:27       0|1:100:19      1|0:100:47
+13     89947139        rs1543646       G       A       .       PASS    AA=A;DP=86      GT:GQ:DP        1|1:75:27       0|1:100:20      1|0:100:41
+1      168954543       rs12136110      T       C       .       PASS    AA=C;DP=127;HM2;HM3     GT:GQ:DP        1|1:75:27       0|1:100:20      1|0:100:79
+5      79732799        rs168940        A       T       .       PASS    AA=T;DP=104     GT:GQ:DP        1|1:75:27       0|1:100:23      1|0:100:52
+17     28760946        rs6505340       C       T       .       PASS    AA=T;DP=123     GT:GQ:DP        1|1:75:27       0|1:100:23      1|0:100:61
+2      234116225       rs10929208      C       T       .       PASS    AA=T;DP=107     GT:GQ:DP        1|1:75:27       0|1:100:25      1|0:100:55
+19     33004242        rs6510334       T       C       .       PASS    AA=t;DP=162     GT:GQ:DP        1|1:75:27       0|1:100:25      1|0:100:84
+6      143457111       rs4489173       T       C       .       PASS    AA=C;DP=130     GT:GQ:DP        1|1:75:27       0|1:100:26      1|0:100:74
+5      35063792        rs3816929       C       T       .       PASS    AA=C;DP=136     GT:GQ:DP        1|1:75:27       0|1:100:27      1|0:100:81
+5      34842951        .       C       A       .       PASS    AA=c;DP=155     GT:GQ:DP        1|1:75:27       0|1:100:36      1|0:100:94
+3      133208111       rs2369357       T       C       .       PASS    AA=C;DP=133     GT:GQ:DP        1|1:75:27       0|1:100:41      1|0:100:67
+7      27527347        rs940525        C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        1|1:75:27       0|1:37:24       1|0:100:59
+17     677793  rs4393629       G       C       .       PASS    AA=C;DP=103     GT:GQ:DP        1|1:75:27       0|1:39:21       1|0:100:56
+7      145875059       rs17586018      G       A       .       PASS    AA=G;DP=123     GT:GQ:DP        1|1:75:27       0|1:48:18       1|0:100:76
+17     72311795        rs8075030       C       G       .       PASS    AA=G;DP=91      GT:GQ:DP        1|1:75:27       0|1:73:16       1|0:100:49
+5      148803702       rs904192        G       C       .       PASS    AA=C;DP=108     GT:GQ:DP        1|1:75:27       0|1:75:19       1|0:100:63
+14     49529359        rs10134002      T       C       .       PASS    AA=T;DP=145     GT:GQ:DP        1|1:75:27       0|1:87:17       1|0:100:56
+6      85700636        rs1322880       C       T       .       PASS    AA=T;DP=90      GT:GQ:DP        1|1:75:27       0|1:93:22       1|0:100:41
+17     65392431        rs1018884       A       G       .       PASS    AA=A;DP=108     GT:GQ:DP        1|1:75:27       1|0:100:21      1|1:100:60
+4      21519342        rs7440879       T       C       .       PASS    AA=C;DP=127     GT:GQ:DP        1|1:75:27       1|0:100:30      1|1:100:69
+11     81170189        rs6591999       G       A       .       PASS    AA=A;DP=121     GT:GQ:DP        1|1:75:27       1|0:62:15       1|1:100:79
+9      37026285        rs4880052       A       G       .       PASS    AA=G;DP=114     GT:GQ:DP        1|1:75:27       1|0:83:19       1|1:100:68
+20     49687567        rs1009234       T       A       .       PASS    AA=A;DP=113     GT:GQ:DP        1|1:75:28       0|1:100:24      1|0:100:59
+15     47757687        rs694722        C       T       .       PASS    AA=T;DP=142     GT:GQ:DP        1|1:75:28       0|1:100:33      1|0:100:43
+13     73519932        rs7993206       C       G       .       PASS    AA=G;DP=148     GT:GQ:DP        1|1:75:28       0|1:100:35      1|0:100:87
+18     12947770        rs28671274      G       A       .       PASS    AA=A;DP=131     GT:GQ:DP        1|1:75:28       0|1:65:21       1|0:100:81
+15     75773323        rs9920633       T       C       .       PASS    AA=N;DP=120     GT:GQ:DP        1|1:75:28       0|1:82:27       1|0:100:67
+6      49855901        rs360551        T       G       .       PASS    AA=G;DP=86      GT:GQ:DP        1|1:75:28       1|1:50:15       1|1:100:44
+4      75314269        rs1246577       G       A       .       PASS    AA=G;DP=121     GT:GQ:DP        1|1:75:29       1|1:53:16       1|1:100:74
+5      52217592        rs2456200       A       C       .       PASS    AA=a;DP=125     GT:GQ:DP        1|1:75:29       1|1:71:23       1|1:100:72
+18     27819774        rs12607151      G       A       .       PASS    AA=G;DP=141     GT:GQ:DP        1|1:75:30       0|1:100:28      1|0:100:83
+22     18301003        rs5746847       T       C       .       PASS    AA=C;DP=119     GT:GQ:DP        1|1:75:30       1|1:56:17       1|1:100:58
+11     18753940        rs10734264      A       G       .       PASS    AA=G;DP=123     GT:GQ:DP        1|1:75:30       1|1:63:25       1|1:100:67
+14     56413871        rs860325        A       T       .       PASS    AA=T;DP=113     GT:GQ:DP        1|1:75:30       1|1:68:21       1|1:100:64
+1      102785098       rs11164544      A       G       .       PASS    AA=A;DP=129;HM2;HM3     GT:GQ:DP        1|1:75:30       1|1:83:28       1|1:100:64
+20     20944265        rs6047202       C       A       .       PASS    AA=A;DP=115     GT:GQ:DP        1|1:75:31       1|1:20:19       1|1:100:64
+7      28209359        rs849316        A       C       .       PASS    AA=C;DP=118     GT:GQ:DP        1|1:75:31       1|1:49:21       1|1:100:59
+10     64870596        rs12261605      T       G       .       PASS    AA=T;DP=125     GT:GQ:DP        1|1:75:31       1|1:52:21       1|1:100:73
+18     20594020        rs7230327       T       C       .       PASS    AA=T;DP=91      GT:GQ:DP        1|1:75:31       1|1:56:18       1|1:100:42
+1      219887925       rs7520263       G       A       .       PASS    AA=G;DP=111;HM2 GT:GQ:DP        1|1:75:31       1|1:71:22       1|1:100:59
+8      105773028       rs3857891       A       G       .       PASS    AA=N;DP=119     GT:GQ:DP        1|1:75:31       1|1:77:24       1|1:100:63
+1      212643479       rs11120310      C       T       .       PASS    AA=T;DP=112;HM2;HM3     GT:GQ:DP        1|1:75:31       1|1:80:26       1|1:100:45
+9      123913335       rs944218        C       T       .       PASS    AA=T;DP=81      GT:GQ:DP        1|1:75:32       1|1:26:8        1|1:94:29
+11     112084177       rs679967        T       A       .       PASS    AA=N;DP=120     GT:GQ:DP        1|1:75:32       1|1:68:22       1|1:100:64
+3      193823745       rs2062832       T       C       .       PASS    AA=C;DP=130     GT:GQ:DP        1|1:75:32       1|1:98:31       1|1:100:65
+3      123452402       rs7644981       G       A       .       PASS    AA=G;DP=141     GT:GQ:DP        1|1:75:33       0|0:47:22       1|0:100:84
+17     45360879        rs271653        C       T       .       PASS    AA=T;DP=154     GT:GQ:DP        1|1:75:33       1|0:100:31      1|1:100:48
+22     31383786        rs7364159       G       A       .       PASS    AA=G;DP=126     GT:GQ:DP        1|1:75:33       1|0:53:20       1|1:100:74
+10     130525650       rs10764821      C       T       .       PASS    AA=C;DP=99      GT:GQ:DP        1|1:75:33       1|0:58:22       1|1:100:37
+3      136116409       rs36203 A       T       .       PASS    AA=T;DP=103     GT:GQ:DP        1|1:75:33       1|0:72:14       1|1:100:46
+12     88923005        rs4240746       T       A       .       PASS    AA=T;DP=137     GT:GQ:DP        1|1:75:34       1|1:42:18       1|1:100:88
+2      219934637       rs6711142       C       T       .       PASS    AA=N;DP=110     GT:GQ:DP        1|1:75:35       1|1:38:11       1|1:100:65
+10     88833585        rs4934293       G       A       .       PASS    AA=A;DP=138     GT:GQ:DP        1|1:75:35       1|1:66:35       1|1:100:69
+12     117635736       rs2682736       G       T       .       PASS    AA=T;DP=141     GT:GQ:DP        1|1:75:35       1|1:80:25       1|1:100:83
+6      1138988 rs238018        G       T       .       PASS    AA=T;DP=137     GT:GQ:DP        1|1:75:35       1|1:98:31       1|1:100:72
+11     17171693        rs511119        A       G       .       PASS    AA=G;DP=102     GT:GQ:DP        1|1:76:24       1|1:12:13       1|1:100:67
+12     77508452        rs1717358       A       C       .       PASS    AA=C;DP=74      GT:GQ:DP        1|1:76:25       1|1:12:10       1|1:81:39
+5      3307017 rs4302592       G       A       .       PASS    AA=A;DP=145     GT:GQ:DP        1|1:76:27       0|0:100:37      1|0:100:82
+12     46559162        rs2228570       A       G       .       PASS    AA=A;DP=78      GT:GQ:DP        1|1:76:27       0|0:12:5        1|0:100:45
+4      63598871        rs6833469       C       G       .       PASS    AA=G;DP=103     GT:GQ:DP        1|1:76:27       0|0:36:12       1|0:100:66
+1      173863202       rs6663397       C       G       .       PASS    AA=G;DP=102     GT:GQ:DP        1|1:76:27       0|0:36:19       1|0:100:57
+5      139954657       rs1864255       T       G       .       PASS    AA=T;DP=118     GT:GQ:DP        1|1:76:27       0|0:38:24       1|0:100:68
+3      180809776       rs9829395       G       A       .       PASS    AA=A;DP=128     GT:GQ:DP        1|1:76:27       0|0:38:24       1|0:100:76
+3      191950958       rs4687172       T       C       .       PASS    AA=T;DP=73      GT:GQ:DP        1|1:76:27       0|0:39:14       1|0:100:24
+5      2190970 .       G       C       .       PASS    AA=g;DP=99      GT:GQ:DP        1|1:76:27       0|0:42:14       1|0:100:58
+8      134285182       rs753723        G       C       .       PASS    AA=G;DP=120     GT:GQ:DP        1|1:76:27       0|0:45:15       1|0:100:79
+X      10038645        rs60204550      T       C       .       PASS    AA=T;DP=108     GT:GQ:DP        1|1:76:27       0|0:45:16       1|0:100:39
+6      87202097        rs1508247       T       C       .       PASS    AA=N;DP=105     GT:GQ:DP        1|1:76:27       0|0:45:25       1|0:100:53
+13     83933314        rs9531590       A       G       .       PASS    AA=G;DP=94      GT:GQ:DP        1|1:76:27       0|0:48:16       1|0:100:51
+9      19002325        rs62560430      A       G       .       PASS    AA=a;DP=109     GT:GQ:DP        1|1:76:27       0|0:48:16       1|0:100:62
+8      10851046        rs7006612       T       C       .       PASS    AA=N;DP=99      GT:GQ:DP        1|1:76:27       0|0:48:17       1|0:100:56
+3      124532628       rs6806529       A       C       .       PASS    AA=C;DP=123     GT:GQ:DP        1|1:76:27       0|0:48:17       1|0:100:80
+2      11062665        rs7597964       T       G       .       PASS    AA=G;DP=92      GT:GQ:DP        1|1:76:27       0|0:51:17       1|0:100:34
+19     33289455        rs10410286      G       A       .       PASS    AA=g;DP=123     GT:GQ:DP        1|1:76:27       0|0:51:17       1|0:100:78
+1      183671032       rs10911729      T       C       .       PASS    AA=T;DP=99      GT:GQ:DP        1|1:76:27       0|0:57:19       1|0:100:52
+9      2079966 rs12001403      A       G       .       PASS    AA=A;DP=102     GT:GQ:DP        1|1:76:27       0|0:57:19       1|0:100:58
+5      157055424       rs56213477      T       C       .       PASS    AA=T;DP=128     GT:GQ:DP        1|1:76:27       0|0:57:19       1|0:100:79
+17     59773615        rs8080988       A       G       .       PASS    AA=G;DP=131     GT:GQ:DP        1|1:76:27       0|0:57:19       1|0:100:85
+1      7643934 rs2995029       T       C       .       PASS    AA=T;DP=117;HM2 GT:GQ:DP        1|1:76:27       0|0:57:20       1|0:100:68
+5      17316805        rs16869671      A       G       .       PASS    AA=G;DP=125     GT:GQ:DP        1|1:76:27       0|0:57:21       1|0:100:79
+3      199179454       rs9832681       A       G       .       PASS    AA=G;DP=117     GT:GQ:DP        1|1:76:27       0|0:57:22       1|0:100:68
+2      221565301       rs35024399      A       G       .       PASS    AA=A;DP=124     GT:GQ:DP        1|1:76:27       0|0:60:21       1|0:100:77
+6      150464350       rs9397629       C       T       .       PASS    AA=C;DP=131     GT:GQ:DP        1|1:76:27       0|0:63:21       1|0:100:86
+2      136047185       .       A       G       .       PASS    AA=A;DP=109     GT:GQ:DP        1|1:76:27       0|0:63:22       1|0:100:59
+20     18205749        .       C       T       .       PASS    AA=C;DP=116     GT:GQ:DP        1|1:76:27       0|0:66:23       1|0:100:64
+3      68686272        rs872113        A       G       .       PASS    AA=G;DP=125     GT:GQ:DP        1|1:76:27       0|0:66:23       1|0:100:74
+6      125586870       rs9491332       C       G       .       PASS    AA=C;DP=106     GT:GQ:DP        1|1:76:27       0|0:66:24       1|0:100:55
+11     112685412       rs4517559       C       T       .       PASS    AA=T;DP=110     GT:GQ:DP        1|1:76:27       0|0:69:24       1|0:100:45
+18     18534644        rs414277        C       T       .       PASS    AA=T;DP=129     GT:GQ:DP        1|1:76:27       0|0:72:24       1|0:100:78
+7      142392094       rs10224764      G       T       .       PASS    AA=T;DP=131     GT:GQ:DP        1|1:76:27       0|0:72:24       1|0:100:80
+20     53826503        rs6024452       T       C       .       PASS    AA=T;DP=113     GT:GQ:DP        1|1:76:27       0|0:72:25       1|0:100:61
+10     95725955        rs10882375      T       C       .       PASS    AA=T;DP=98      GT:GQ:DP        1|1:76:27       0|0:75:25       1|0:100:48
+3      159871822       rs16829283      G       A       .       PASS    AA=G;DP=130     GT:GQ:DP        1|1:76:27       0|0:75:25       1|0:100:78
+6      151057751       rs275350        C       G       .       PASS    AA=C;DP=91      GT:GQ:DP        1|1:76:27       0|0:78:28       1|0:100:28
+3      98073469        rs16836730      C       T       .       PASS    AA=c;DP=143     GT:GQ:DP        1|1:76:27       0|0:80:29       1|0:100:40
+18     41412141        rs2705399       G       C       .       PASS    AA=T;DP=118     GT:GQ:DP        1|1:76:27       0|0:81:27       1|0:100:65
+17     50100681        .       T       G       .       PASS    AA=T;DP=142     GT:GQ:DP        1|1:76:27       0|0:87:29       1|0:100:43
+17     64319670        rs9911308       G       C       .       PASS    AA=C;DP=128     GT:GQ:DP        1|1:76:27       0|0:87:29       1|0:100:73
+9      25060903        .       G       A       .       PASS    AA=G;DP=123     GT:GQ:DP        1|1:76:27       0|0:90:31       1|0:100:66
+19     57067938        rs10407547      C       T       .       PASS    AA=T;DP=121     GT:GQ:DP        1|1:76:27       0|0:90:32       1|0:100:60
+9      12193051        rs10756341      T       C       .       PASS    AA=T;DP=129     GT:GQ:DP        1|1:76:27       0|0:93:31       1|0:100:71
+5      52037858        rs7729871       T       C       .       PASS    AA=T;DP=126     GT:GQ:DP        1|1:76:27       0|0:96:34       1|0:100:65
+13     76373972        rs674041        C       T       .       PASS    AA=T;DP=126     GT:GQ:DP        1|1:76:27       1|0:94:21       1|1:100:76
+8      18394642        rs12546055      T       G       .       PASS    AA=t;DP=136     GT:GQ:DP        1|1:76:28       0|0:100:38      1|0:100:72
+18     63442238        .       C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        1|1:76:28       0|0:51:17       1|0:100:65
+5      89212152        rs10038648      T       A       .       PASS    AA=T;DP=117     GT:GQ:DP        1|1:76:28       0|0:54:18       1|0:100:75
+16     87593142        rs8063176       T       G       .       PASS    AA=T;DP=112     GT:GQ:DP        1|1:76:28       0|0:57:19       1|0:100:65
+5      52497874        rs937579        C       G       .       PASS    AA=C;DP=121     GT:GQ:DP        1|1:76:28       0|0:57:20       1|0:100:74
+4      183321069       rs13122617      C       T       .       PASS    AA=T;DP=147     GT:GQ:DP        1|1:76:28       0|0:69:23       1|0:100:43
+15     83800149        rs4564526       T       A       .       PASS    AA=A;DP=132     GT:GQ:DP        1|1:76:28       0|0:72:24       1|0:100:81
+18     74947266        rs7239038       G       A       .       PASS    AA=A;DP=113     GT:GQ:DP        1|1:76:28       0|0:75:25       1|0:100:58
+3      175008462       rs1488547       A       G       .       PASS    AA=A;DP=97      GT:GQ:DP        1|1:76:28       0|0:87:30       1|0:100:29
+3      7101329 rs6799384       G       C       .       PASS    AA=C;DP=149     GT:GQ:DP        1|1:76:28       0|0:90:30       1|0:100:80
+7      8235941 rs11973320      A       G       .       PASS    AA=A;DP=118     GT:GQ:DP        1|1:76:28       0|0:93:32       1|0:100:58
+4      129499666       rs10025262      G       C       .       PASS    AA=G;DP=152     GT:GQ:DP        1|1:76:28       0|0:96:32       1|0:100:47
+4      166694320       rs6536920       A       G       .       PASS    AA=A;DP=111     GT:GQ:DP        1|1:76:29       0|0:51:18       1|0:100:67
+20     3814199 .       A       G       .       PASS    AA=.;DP=138     GT:GQ:DP        1|1:76:29       0|0:90:31       1|0:100:76
+3      70396248        rs4974283       T       C       .       PASS    AA=C;DP=152     GT:GQ:DP        1|1:76:29       0|0:96:32       1|0:100:88
+15     25764885        rs6497248       G       A       .       PASS    AA=g;DP=118     GT:GQ:DP        1|1:76:30       1|0:71:19       1|1:100:56
+20     7785866 rs2223560       A       G       .       PASS    AA=G;DP=92      GT:GQ:DP        1|1:76:30       1|1:53:16       1|1:100:38
+5      89484711        rs4916785       A       G       .       PASS    AA=A;DP=129     GT:GQ:DP        1|1:76:30       1|1:58:30       1|1:100:68
+1      221737109       rs4448510       G       T       .       PASS    AA=T;DP=118     GT:GQ:DP        1|1:76:30       1|1:62:19       1|1:100:71
+16     55019501        rs4784667       G       A       .       PASS    AA=A;DP=124     GT:GQ:DP        1|1:76:30       1|1:62:20       1|1:100:76
+4      36743580        rs4832723       C       T       .       PASS    AA=T;DP=119     GT:GQ:DP        1|1:76:30       1|1:77:24       1|1:100:60
+9      5740243 rs2031180       C       A       .       PASS    AA=C;DP=109     GT:GQ:DP        1|1:76:30       1|1:82:33       1|1:100:33
+3      10735706        rs4594599       C       G       .       PASS    AA=G;DP=119     GT:GQ:DP        1|1:76:31       1|1:62:21       1|1:100:69
+10     7082065 rs7070721       T       G       .       PASS    AA=G;DP=127     GT:GQ:DP        1|1:76:32       0|0:69:23       1|0:100:71
+17     78459716        rs8073910       G       T       .       PASS    AA=T;DP=134     GT:GQ:DP        1|1:76:32       0|1:21:18       1|0:100:45
+21     44767173        rs58270608      T       C       .       PASS    AA=C;DP=100     GT:GQ:DP        1|1:76:32       1|0:100:14      1|1:100:51
+13     20849016        rs9509669       A       G       .       PASS    AA=N;DP=131     GT:GQ:DP        1|1:76:32       1|0:100:34      1|1:100:61
+3      161628762       rs58776572      C       G       .       PASS    AA=C;DP=138     GT:GQ:DP        1|1:76:33       0|0:66:23       1|0:100:84
+14     71769672        rs1402058       T       C       .       PASS    AA=T;DP=140     GT:GQ:DP        1|1:76:33       0|0:75:27       1|0:100:41
+19     33515727        rs347786        A       G       .       PASS    AA=G;DP=145     GT:GQ:DP        1|1:76:33       0|1:90:28       1|0:100:72
+13     100155811       rs1632383       T       C       .       PASS    AA=t;DP=126     GT:GQ:DP        1|1:76:34       0|0:45:15       1|0:100:77
+19     23236508        .       A       G       .       PASS    AA=A;DP=138     GT:GQ:DP        1|1:76:34       0|0:54:20       1|0:100:85
+3      20090248        rs17006525      T       C       .       PASS    AA=C;DP=133     GT:GQ:DP        1|1:76:34       0|1:100:38      1|0:100:67
+3      142292419       rs4683554       C       A       .       PASS    AA=A;DP=124     GT:GQ:DP        1|1:76:34       1|0:95:23       1|1:100:68
+11     61451992        rs7395362       T       C       .       PASS    AA=C;DP=138     GT:GQ:DP        1|1:76:34       1|1:39:23       1|1:100:85
+10     107101880       rs3011655       A       C       .       PASS    AA=a;DP=127     GT:GQ:DP        1|1:76:35       1|1:41:25       1|1:100:71
+5      140349502       rs31874 C       T       .       PASS    AA=T;DP=134     GT:GQ:DP        1|1:76:35       1|1:56:19       1|1:100:81
+1      164234585       rs9426841       A       G       .       PASS    AA=G;DP=121;HM2;HM3     GT:GQ:DP        1|1:76:35       1|1:62:19       1|1:100:69
+11     86663056        rs301598        G       A       .       PASS    AA=A;DP=135     GT:GQ:DP        1|1:76:35       1|1:67:28       1|1:100:73
+3      194703924       rs9866274       G       A       .       PASS    AA=A;DP=138     GT:GQ:DP        1|1:76:36       1|0:100:40      1|1:100:63
+16     81263293        rs8057135       A       C       .       PASS    AA=C;DP=123     GT:GQ:DP        1|1:76:36       1|1:41:23       1|1:100:66
+14     72139070        rs2107688       T       G       .       PASS    AA=G;DP=144     GT:GQ:DP        1|1:76:36       1|1:83:26       1|1:100:79
+2      9168076 rs2356776       T       C       .       PASS    AA=-;DP=95      GT:GQ:DP        1|1:76:37       1|0:100:24      1|1:90:30
+14     102732553       rs2763564       T       G       .       PASS    AA=G;DP=113     GT:GQ:DP        1|1:76:37       1|0:82:17       1|1:100:59
+8      96241666        rs10956940      T       G       .       PASS    AA=G;DP=128     GT:GQ:DP        1|1:76:37       1|1:31:13       1|1:100:78
+17     75636789        rs8074779       T       C       .       PASS    AA=T;DP=161     GT:GQ:DP        1|1:76:38       0|1:100:22      1|0:100:60
+10     125248327       rs10902935      T       G       .       PASS    AA=T;DP=152     GT:GQ:DP        1|1:76:38       0|1:100:32      1|0:100:40
+2      151242026       rs1519782       A       G       .       PASS    AA=G;DP=137     GT:GQ:DP        1|1:76:38       0|1:100:33      1|0:100:69
+15     86597714        rs1105693       G       A       .       PASS    AA=G;DP=138     GT:GQ:DP        1|1:76:38       0|1:80:17       1|0:100:85
+6      137101620       rs1570056       T       C       .       PASS    AA=C;DP=113     GT:GQ:DP        1|1:76:39       0|0:45:17       1|0:100:55
+10     95284853        rs4917843       G       C       .       PASS    AA=g;DP=142     GT:GQ:DP        1|1:76:39       0|0:75:25       1|0:100:77
+18     10810979        rs1683393       G       A       .       PASS    AA=A;DP=142     GT:GQ:DP        1|1:76:39       0|0:81:27       1|0:100:77
+1      23227464        rs7548692       T       A       .       PASS    AA=T;DP=141;HM2 GT:GQ:DP        1|1:76:39       0|0:99:34       1|0:100:71
+3      101710154       rs7650523       A       G       .       PASS    AA=A;DP=107     GT:GQ:DP        1|1:76:40       1|1:47:23       1|1:100:45
+2      170318666       rs4667608       C       T       .       PASS    AA=T;DP=149     GT:GQ:DP        1|1:76:43       0|1:100:25      1|0:100:83
+18     29081710        rs8089563       C       T       .       PASS    AA=T;DP=119     GT:GQ:DP        1|1:77:24       1|1:100:32      1|1:100:62
+4      161782305       rs12505313      T       C       .       PASS    AA=C;DP=127     GT:GQ:DP        1|1:77:24       1|1:100:38      1|1:100:66
+16     7088538 rs7195118       T       G       .       PASS    AA=G;DP=108     GT:GQ:DP        1|1:77:24       1|1:16:16       1|1:100:69
+10     131621321       rs10829662      C       T       .       PASS    AA=C;DP=102     GT:GQ:DP        1|1:77:24       1|1:22:11       1|1:100:64
+12     64971528        rs6421217       G       T       .       PASS    AA=T;DP=87      GT:GQ:DP        1|1:77:24       1|1:22:20       1|1:100:28
+16     4901004 rs8057613       A       G       .       PASS    AA=G;DP=71      GT:GQ:DP        1|1:77:24       1|1:23:6        1|1:100:39
+4      66041929        rs4379107       C       T       .       PASS    AA=T;DP=76      GT:GQ:DP        1|1:77:24       1|1:24:11       1|1:100:31
+3      32129512        rs12634660      C       T       .       PASS    AA=T;DP=78      GT:GQ:DP        1|1:77:24       1|1:26:12       1|1:100:40
+10     92443585        rs2800148       C       T       .       PASS    AA=T;DP=77      GT:GQ:DP        1|1:77:24       1|1:26:7        1|1:100:46
+5      29000586        rs314837        G       A       .       PASS    AA=A;DP=72      GT:GQ:DP        1|1:77:24       1|1:26:8        1|1:100:42
+14     101952068       rs2403041       T       C       .       PASS    AA=C;DP=104     GT:GQ:DP        1|1:77:24       1|1:27:18       1|1:100:59
+16     82597597        rs9934217       A       C       .       PASS    AA=A;DP=128     GT:GQ:DP        1|1:77:24       1|1:28:26       1|1:100:79
+7      50571028        rs4245549       A       C       .       PASS    AA=C;DP=125     GT:GQ:DP        1|1:77:24       1|1:29:13       1|1:100:88
+18     33352567        rs729716        T       C       .       PASS    AA=C;DP=78      GT:GQ:DP        1|1:77:24       1|1:29:8        1|1:100:36
+15     60517699        rs1117802       G       T       .       PASS    AA=G;DP=120     GT:GQ:DP        1|1:77:24       1|1:30:17       1|1:100:79
+17     46834433        rs11870654      A       G       .       PASS    AA=G;DP=90      GT:GQ:DP        1|1:77:24       1|1:32:9        1|1:100:56
+2      214727781       rs6723977       A       T       .       PASS    AA=T;DP=86      GT:GQ:DP        1|1:77:24       1|1:33:15       1|1:100:46
+6      123386491       rs6908501       C       T       .       PASS    AA=T;DP=81      GT:GQ:DP        1|1:77:24       1|1:34:15       1|1:100:42
+11     36397207        rs6484852       C       A       .       PASS    AA=A;DP=124     GT:GQ:DP        1|1:77:24       1|1:34:15       1|1:100:85
+4      60695911        rs2028457       T       C       .       PASS    AA=C;DP=70      GT:GQ:DP        1|1:77:24       1|1:35:10       1|1:100:27
+12     30204383        rs7296068       T       C       .       PASS    AA=T;DP=91      GT:GQ:DP        1|1:77:24       1|1:35:10       1|1:100:59
+12     67183756        rs7300731       C       T       .       PASS    AA=T;DP=95      GT:GQ:DP        1|1:77:24       1|1:35:10       1|1:100:60
+11     121563686       rs7931425       T       G       .       PASS    AA=T;DP=121     GT:GQ:DP        1|1:77:24       1|1:35:23       1|1:100:70
+19     39876077        rs10425928      G       T       .       PASS    AA=.;DP=91      GT:GQ:DP        1|1:77:24       1|1:36:18       1|1:100:40
+1      75799309        rs211702        C       A       .       PASS    AA=C;DP=96;HM2  GT:GQ:DP        1|1:77:24       1|1:37:18       1|1:100:54
+6      112606760       rs6568721       T       G       .       PASS    AA=G;DP=107     GT:GQ:DP        1|1:77:24       1|1:37:21       1|1:100:62
+2      40138467        rs985059        A       G       .       PASS    AA=G;DP=85      GT:GQ:DP        1|1:77:24       1|1:38:11       1|1:100:50
+4      52445167        rs10434448      C       G       .       PASS    AA=C;DP=86      GT:GQ:DP        1|1:77:24       1|1:38:11       1|1:100:54
+22     34787559        rs132606        C       T       .       PASS    AA=T;DP=92      GT:GQ:DP        1|1:77:24       1|1:38:12       1|1:100:58
+18     45340996        rs4245232       A       C       .       PASS    AA=C;DP=115     GT:GQ:DP        1|1:77:24       1|1:38:15       1|1:100:78
+13     78499293        rs920533        C       T       .       PASS    AA=C;DP=109     GT:GQ:DP        1|1:77:24       1|1:38:22       1|1:100:59
+5      15456401        rs381972        G       A       .       PASS    AA=A;DP=70      GT:GQ:DP        1|1:77:24       1|1:41:12       1|1:100:26
+17     66723278        rs9905278       C       T       .       PASS    AA=T;DP=81      GT:GQ:DP        1|1:77:24       1|1:41:12       1|1:100:37
+1      15705130        rs1052576       T       C       .       PASS    AA=t;DP=92;HM2;HM3      GT:GQ:DP        1|1:77:24       1|1:41:12       1|1:100:58
+3      145733030       rs1656995       G       A       .       PASS    AA=A;DP=98      GT:GQ:DP        1|1:77:24       1|1:41:12       1|1:100:58
+6      96039349        rs2253905       T       A       .       PASS    AA=A;DP=80      GT:GQ:DP        1|1:77:24       1|1:41:13       1|1:100:42
+1      40033034        rs230288        A       G       .       PASS    AA=G;DP=100     GT:GQ:DP        1|1:77:24       1|1:41:18       1|1:100:61
+1      8586408 rs12136766      G       A       .       PASS    AA=G;DP=114;HM2;HM3     GT:GQ:DP        1|1:77:24       1|1:41:18       1|1:100:72
+13     45682397        rs1230479       T       C       .       PASS    AA=C;DP=98      GT:GQ:DP        1|1:77:24       1|1:42:14       1|1:100:60
+4      100316726       rs6845578       C       T       .       PASS    AA=C;DP=95      GT:GQ:DP        1|1:77:24       1|1:42:23       1|1:100:49
+9      100396910       rs1537737       C       G       .       PASS    AA=G;DP=112     GT:GQ:DP        1|1:77:24       1|1:43:18       1|1:100:70
+8      77574250        rs10957800      T       C       .       PASS    AA=C;DP=112     GT:GQ:DP        1|1:77:24       1|1:43:21       1|1:100:56
+1      15468263        rs6679398       A       T       .       PASS    AA=t;DP=85;HM2  GT:GQ:DP        1|1:77:24       1|1:44:13       1|1:100:49
+2      177870832       rs2444563       C       T       .       PASS    AA=C;DP=96      GT:GQ:DP        1|1:77:24       1|1:44:13       1|1:100:59
+12     131730743       rs10870483      G       A       .       PASS    AA=A;DP=105     GT:GQ:DP        1|1:77:24       1|1:44:13       1|1:100:69
+16     76581894        rs10871343      T       C       .       PASS    AA=C;DP=76      GT:GQ:DP        1|1:77:24       1|1:44:14       1|1:100:38
+9      20803766        rs7853809       G       C       .       PASS    AA=C;DP=99      GT:GQ:DP        1|1:77:24       1|1:44:14       1|1:100:60
+2      100484006       rs4851324       C       T       .       PASS    AA=T;DP=98      GT:GQ:DP        1|1:77:24       1|1:45:19       1|1:100:56
+7      136262573       rs1364409       T       A       .       PASS    AA=A;DP=83      GT:GQ:DP        1|1:77:24       1|1:45:20       1|1:100:39
+2      113254050       rs3783539       T       C       .       PASS    AA=C;DP=119     GT:GQ:DP        1|1:77:24       1|1:45:22       1|1:100:59
+1      81456522        rs1195871       T       C       .       PASS    AA=C;DP=75;HM2  GT:GQ:DP        1|1:77:24       1|1:47:14       1|1:100:25
+8      116186188       rs309608        G       A       .       PASS    AA=A;DP=85      GT:GQ:DP        1|1:77:24       1|1:47:14       1|1:100:43
+8      143762844       rs2978983       A       G       .       PASS    AA=A;DP=119     GT:GQ:DP        1|1:77:24       1|1:47:14       1|1:100:75
+8      29638904        rs10109312      A       G       .       PASS    AA=G;DP=123     GT:GQ:DP        1|1:77:24       1|1:47:21       1|1:100:74
+10     15568113        rs6602866       T       C       .       PASS    AA=N;DP=82      GT:GQ:DP        1|1:77:24       1|1:50:15       1|1:100:35
+17     15057904        rs230925        A       C       .       PASS    AA=N;DP=81      GT:GQ:DP        1|1:77:24       1|1:50:15       1|1:100:42
+6      145592224       rs1407063       T       G       .       PASS    AA=G;DP=83      GT:GQ:DP        1|1:77:24       1|1:50:15       1|1:100:42
+3      40825435        rs674592        T       G       .       PASS    AA=G;DP=91      GT:GQ:DP        1|1:77:24       1|1:50:15       1|1:100:53
+11     117705411       rs11216853      T       A       .       PASS    AA=A;DP=98      GT:GQ:DP        1|1:77:24       1|1:50:15       1|1:100:58
+21     24893864        rs2212563       T       C       .       PASS    AA=C;DP=100     GT:GQ:DP        1|1:77:24       1|1:50:15       1|1:100:62
+5      44470973        rs2973654       G       A       .       PASS    AA=A;DP=89      GT:GQ:DP        1|1:77:24       1|1:50:17       1|1:100:49
+8      81528891        rs578210        T       C       .       PASS    AA=C;DP=108     GT:GQ:DP        1|1:77:24       1|1:50:23       1|1:100:60
+1      219351664       rs10779420      C       T       .       PASS    AA=T;DP=88      GT:GQ:DP        1|1:77:24       1|1:51:21       1|1:100:41
+6      156841647       rs2819062       G       T       .       PASS    AA=T;DP=85      GT:GQ:DP        1|1:77:24       1|1:53:16       1|1:100:31
+10     84052323        rs1414763       G       A       .       PASS    AA=A;DP=79      GT:GQ:DP        1|1:77:24       1|1:53:16       1|1:100:36
+5      96658703        rs1852739       C       G       .       PASS    AA=N;DP=95      GT:GQ:DP        1|1:77:24       1|1:53:16       1|1:100:45
+3      2818723 rs972129        A       C       .       PASS    AA=C;DP=102     GT:GQ:DP        1|1:77:24       1|1:53:16       1|1:100:48
+1      111753685       rs1264872       T       A       .       PASS    AA=A;DP=90;HM3  GT:GQ:DP        1|1:77:24       1|1:53:16       1|1:100:49
+3      99423536        rs4857351       C       T       .       PASS    AA=T;DP=90      GT:GQ:DP        1|1:77:24       1|1:53:16       1|1:100:49
+9      87065435        rs10122948      A       G       .       PASS    AA=G;DP=95      GT:GQ:DP        1|1:77:24       1|1:53:16       1|1:100:55
+5      175246093       rs2114968       T       C       .       PASS    AA=t;DP=100     GT:GQ:DP        1|1:77:24       1|1:53:16       1|1:100:61
+10     93861046        rs701846        G       A       .       PASS    AA=G;DP=112     GT:GQ:DP        1|1:77:24       1|1:53:16       1|1:100:72
+11     108268247       rs2726898       A       G       .       PASS    AA=G;DP=123     GT:GQ:DP        1|1:77:24       1|1:53:16       1|1:100:80
+3      3140158 rs1278151       T       A       .       PASS    AA=A;DP=78      GT:GQ:DP        1|1:77:24       1|1:53:17       1|1:100:26
+1      154109192       rs822516        T       C       .       PASS    AA=C;DP=134;HM2;HM3     GT:GQ:DP        1|1:77:24       1|1:53:17       1|1:100:51
+8      25386794        rs7818622       C       T       .       PASS    AA=T;DP=100     GT:GQ:DP        1|1:77:24       1|1:53:17       1|1:100:59
+11     104389740       rs542667        G       C       .       PASS    AA=C;DP=81      GT:GQ:DP        1|1:77:24       1|1:56:17       1|1:100:39
+8      126269378       rs12542820      C       T       .       PASS    AA=T;DP=91      GT:GQ:DP        1|1:77:24       1|1:56:17       1|1:100:45
+4      134403100       rs10003924      C       A       .       PASS    AA=A;DP=92      GT:GQ:DP        1|1:77:24       1|1:56:17       1|1:100:53
+4      188452854       rs7696968       G       A       .       PASS    AA=A;DP=98      GT:GQ:DP        1|1:77:24       1|1:56:17       1|1:100:56
+8      64000327        rs4352845       G       C       .       PASS    AA=C;DP=100     GT:GQ:DP        1|1:77:24       1|1:56:17       1|1:100:58
+13     39451861        rs276431        G       T       .       PASS    AA=T;DP=99      GT:GQ:DP        1|1:77:24       1|1:56:18       1|1:100:53
+15     24271399        rs2912601       G       A       .       PASS    AA=G;DP=103     GT:GQ:DP        1|1:77:24       1|1:56:18       1|1:100:60
+6      99863312        rs221533        C       T       .       PASS    AA=T;DP=93      GT:GQ:DP        1|1:77:24       1|1:56:19       1|1:100:49
+11     38966078        rs1365559       A       G       .       PASS    AA=G;DP=118     GT:GQ:DP        1|1:77:24       1|1:56:19       1|1:100:72
+16     83992195        rs4783194       T       C       .       PASS    AA=-;DP=100     GT:GQ:DP        1|1:77:24       1|1:57:22       1|1:100:53
+6      118883614       rs10457334      G       A       .       PASS    AA=G;DP=108     GT:GQ:DP        1|1:77:24       1|1:57:25       1|1:100:57
+20     8837733 rs6039322       T       G       .       PASS    AA=G;DP=132     GT:GQ:DP        1|1:77:24       1|1:57:31       1|1:100:75
+13     52447371        rs730371        G       A       .       PASS    AA=G;DP=123     GT:GQ:DP        1|1:77:24       1|1:58:27       1|1:100:67
+1      94968135        rs61684001      C       T       .       PASS    AA=T;DP=142     GT:GQ:DP        1|1:77:24       1|1:58:29       1|1:100:88
+13     92647899        rs476517        C       T       .       PASS    AA=t;DP=75      GT:GQ:DP        1|1:77:24       1|1:59:18       1|1:100:27
+1      20468272        rs2187919       C       G       .       PASS    AA=C;DP=115;HM2 GT:GQ:DP        1|1:77:24       1|1:59:18       1|1:100:35
+21     35863833        rs2251426       C       T       .       PASS    AA=T;DP=83      GT:GQ:DP        1|1:77:24       1|1:59:18       1|1:100:40
+2      168098914       rs1227129       C       T       .       PASS    AA=T;DP=98      GT:GQ:DP        1|1:77:24       1|1:59:18       1|1:100:55
+2      136155560       rs313518        C       T       .       PASS    AA=T;DP=111     GT:GQ:DP        1|1:77:24       1|1:59:18       1|1:100:67
+2      34729563        rs1880484       A       C       .       PASS    AA=A;DP=114     GT:GQ:DP        1|1:77:24       1|1:59:18       1|1:100:72
+9      134686863       rs10901215      T       C       .       PASS    AA=C;DP=87      GT:GQ:DP        1|1:77:24       1|1:59:19       1|1:100:44
+3      146158790       rs4434181       T       A       .       PASS    AA=A;DP=90      GT:GQ:DP        1|1:77:24       1|1:59:19       1|1:100:47
+5      6217417 rs6869453       C       T       .       PASS    AA=T;DP=120     GT:GQ:DP        1|1:77:24       1|1:59:19       1|1:100:73
+1      196604945       rs10922411      T       C       .       PASS    AA=C;DP=96      GT:GQ:DP        1|1:77:24       1|1:59:21       1|1:100:51
+3      153943391       rs1461169       A       G       .       PASS    AA=a;DP=117     GT:GQ:DP        1|1:77:24       1|1:59:21       1|1:100:74
+10     98137820        rs4919007       A       T       .       PASS    AA=T;DP=124     GT:GQ:DP        1|1:77:24       1|1:60:24       1|1:100:78
+17     65095146        rs8064932       A       G       .       PASS    AA=G;DP=108     GT:GQ:DP        1|1:77:24       1|1:60:26       1|1:100:57
+2      41932915        rs6544484       A       C       .       PASS    AA=C;DP=103     GT:GQ:DP        1|1:77:24       1|1:60:30       1|1:100:42
+11     13073399        rs7125098       C       A       .       PASS    AA=C;DP=106     GT:GQ:DP        1|1:77:24       1|1:61:24       1|1:100:58
+8      8631154 rs574595        C       T       .       PASS    AA=T;DP=77      GT:GQ:DP        1|1:77:24       1|1:62:19       1|1:100:25
+21     24372755        rs9981744       T       C       .       PASS    AA=T;DP=79      GT:GQ:DP        1|1:77:24       1|1:62:19       1|1:100:35
+8      5211063 rs4317593       T       C       .       PASS    AA=C;DP=88      GT:GQ:DP        1|1:77:24       1|1:62:19       1|1:100:35
+1      218893568       rs4846657       A       G       .       PASS    AA=G;DP=86;HM2;HM3      GT:GQ:DP        1|1:77:24       1|1:62:19       1|1:100:43
+X      67408138        rs16990580      T       A       .       PASS    AA=A;DP=119     GT:GQ:DP        1|1:77:24       1|1:62:19       1|1:100:45
+5      20055032        rs2221663       T       C       .       PASS    AA=N;DP=101     GT:GQ:DP        1|1:77:24       1|1:62:19       1|1:100:60
+1      185967200       rs4492570       T       C       .       PASS    AA=C;DP=105     GT:GQ:DP        1|1:77:24       1|1:62:19       1|1:100:63
+13     47685461        rs4942757       C       A       .       PASS    AA=A;DP=110     GT:GQ:DP        1|1:77:24       1|1:62:19       1|1:100:66
+2      103490578       rs17336454      G       T       .       PASS    AA=T;DP=108     GT:GQ:DP        1|1:77:24       1|1:62:19       1|1:100:66
+8      132493653       rs6470972       C       T       .       PASS    AA=T;DP=108     GT:GQ:DP        1|1:77:24       1|1:62:19       1|1:100:67
+7      104967744       rs1721505       C       T       .       PASS    AA=T;DP=80      GT:GQ:DP        1|1:77:24       1|1:62:20       1|1:100:26
+15     57505020        rs4419003       A       T       .       PASS    AA=T;DP=89      GT:GQ:DP        1|1:77:24       1|1:62:20       1|1:100:35
+6      22771451        rs4410719       T       A       .       PASS    AA=A;DP=110     GT:GQ:DP        1|1:77:24       1|1:62:20       1|1:100:68
+3      35572611        rs4493380       T       C       .       PASS    AA=C;DP=101     GT:GQ:DP        1|1:77:24       1|1:62:21       1|1:100:53
+4      95779914        rs6532493       G       T       .       PASS    AA=T;DP=102     GT:GQ:DP        1|1:77:24       1|1:62:22       1|1:100:56
+8      4767692 rs7007744       A       G       .       PASS    AA=G;DP=108     GT:GQ:DP        1|1:77:24       1|1:62:29       1|1:100:56
+7      133122159       rs2551025       A       C       .       PASS    AA=a;DP=135     GT:GQ:DP        1|1:77:24       1|1:63:31       1|1:100:79
+14     26628997        rs8023000       A       T       .       PASS    AA=A;DP=77      GT:GQ:DP        1|1:77:24       1|1:65:20       1|1:100:21
+3      26411958        rs4973826       A       G       .       PASS    AA=G;DP=105     GT:GQ:DP        1|1:77:24       1|1:65:20       1|1:100:60
+6      131897736       rs2781643       C       G       .       PASS    AA=G;DP=99      GT:GQ:DP        1|1:77:24       1|1:65:21       1|1:100:54
+5      162485181       rs6556655       A       G       .       PASS    AA=N;DP=114     GT:GQ:DP        1|1:77:24       1|1:65:21       1|1:100:70
+1      226684951       rs1188484       T       C       .       PASS    AA=N;DP=119;HM2 GT:GQ:DP        1|1:77:24       1|1:65:21       1|1:100:76
+2      53312602        rs1364665       C       G       .       PASS    AA=c;DP=129     GT:GQ:DP        1|1:77:24       1|1:65:21       1|1:100:79
+15     99029374        rs304101        T       C       .       PASS    AA=C;DP=109     GT:GQ:DP        1|1:77:24       1|1:65:22       1|1:100:63
+9      21722544        rs1414236       C       A       .       PASS    AA=g;DP=120     GT:GQ:DP        1|1:77:24       1|1:68:21       1|1:100:37
+15     81476777        rs3087804       A       G       .       PASS    AA=G;DP=95      GT:GQ:DP        1|1:77:24       1|1:68:21       1|1:100:50
+11     25710006        rs1038934       T       C       .       PASS    AA=t;DP=101     GT:GQ:DP        1|1:77:24       1|1:68:21       1|1:100:55
+3      3801238 rs769642        T       C       .       PASS    AA=C;DP=104     GT:GQ:DP        1|1:77:24       1|1:68:21       1|1:100:56
+2      21335455        rs10746529      G       A       .       PASS    AA=A;DP=103     GT:GQ:DP        1|1:77:24       1|1:68:21       1|1:100:58
+16     79920830        rs7196981       T       C       .       PASS    AA=C;DP=104     GT:GQ:DP        1|1:77:24       1|1:68:21       1|1:100:59
+9      80338172        rs2938886       A       G       .       PASS    AA=A;DP=106     GT:GQ:DP        1|1:77:24       1|1:68:21       1|1:100:62
+2      106198815       rs7594334       A       G       .       PASS    AA=a;DP=116     GT:GQ:DP        1|1:77:24       1|1:68:21       1|1:100:70
+5      71200969        rs7736630       C       T       .       PASS    AA=C;DP=121     GT:GQ:DP        1|1:77:24       1|1:68:21       1|1:100:77
+14     98004847        rs2776498       G       C       .       PASS    AA=C;DP=114     GT:GQ:DP        1|1:77:24       1|1:68:22       1|1:100:65
+5      59856990        rs35383 T       C       .       PASS    AA=C;DP=117     GT:GQ:DP        1|1:77:24       1|1:68:22       1|1:100:70
+13     56788836        rs9527641       T       C       .       PASS    AA=t;DP=126     GT:GQ:DP        1|1:77:24       1|1:68:22       1|1:100:82
+18     59994664        rs4327152       T       C       .       PASS    AA=T;DP=106     GT:GQ:DP        1|1:77:24       1|1:68:23       1|1:100:59
+18     25106810        rs4800914       A       G       .       PASS    AA=G;DP=129     GT:GQ:DP        1|1:77:24       1|1:68:23       1|1:100:84
+2      33753926        rs1550993       T       G       .       PASS    AA=.;DP=124     GT:GQ:DP        1|1:77:24       1|1:68:27       1|1:100:69
+2      222577257       rs1593184       G       A       .       PASS    AA=A;DP=93      GT:GQ:DP        1|1:77:24       1|1:71:22       1|1:100:49
+22     46450928        rs67059 T       C       .       PASS    AA=C;DP=142     GT:GQ:DP        1|1:77:24       1|1:71:22       1|1:100:52
+8      52187444        rs7817817       C       A       .       PASS    AA=C;DP=110     GT:GQ:DP        1|1:77:24       1|1:71:22       1|1:100:63
+6      70313941        rs2572986       T       C       .       PASS    AA=C;DP=91      GT:GQ:DP        1|1:77:24       1|1:71:23       1|1:100:38
+21     46847360        rs2839358       C       A       .       PASS    AA=T;DP=94      GT:GQ:DP        1|1:77:24       1|1:71:23       1|1:100:50
+8      14638130        rs2254776       T       C       .       PASS    AA=C;DP=105     GT:GQ:DP        1|1:77:24       1|1:71:23       1|1:100:59
+1      168159954       rs544008        C       A       .       PASS    AA=C;DP=114;HM2;HM3     GT:GQ:DP        1|1:77:24       1|1:71:33       1|1:100:55
+8      17828766        rs422746        C       A       .       PASS    AA=A;DP=118     GT:GQ:DP        1|1:77:24       1|1:73:29       1|1:100:69
+16     80522040        rs7499232       T       C       .       PASS    AA=T;DP=84      GT:GQ:DP        1|1:77:24       1|1:74:23       1|1:100:29
+4      185018723       rs6852576       G       A       .       PASS    AA=A;DP=97      GT:GQ:DP        1|1:77:24       1|1:74:23       1|1:100:50
+9      29892934        rs2502096       C       T       .       PASS    AA=T;DP=110     GT:GQ:DP        1|1:77:24       1|1:74:23       1|1:100:63
+2      57469328        rs13385623      C       A       .       PASS    AA=A;DP=118     GT:GQ:DP        1|1:77:24       1|1:74:23       1|1:100:69
+7      27637821        rs12155430      C       T       .       PASS    AA=C;DP=127     GT:GQ:DP        1|1:77:24       1|1:74:23       1|1:100:80
+X      9229041 rs5934561       A       G       .       PASS    AA=N;DP=126     GT:GQ:DP        1|1:77:24       1|1:74:24       1|1:100:32
+12     31579802        rs1259355       A       G       .       PASS    AA=G;DP=91      GT:GQ:DP        1|1:77:24       1|1:74:24       1|1:100:34
+13     99092411        rs9554624       T       C       .       PASS    AA=C;DP=111     GT:GQ:DP        1|1:77:24       1|1:74:24       1|1:100:63
+4      137798720       rs2406048       T       G       .       PASS    AA=G;DP=95      GT:GQ:DP        1|1:77:24       1|1:77:24       1|1:100:46
+8      132096833       rs928137        G       A       .       PASS    AA=A;DP=96      GT:GQ:DP        1|1:77:24       1|1:77:24       1|1:100:49
+14     62850476        rs728526        T       C       .       PASS    AA=C;DP=109     GT:GQ:DP        1|1:77:24       1|1:77:24       1|1:100:57
+3      80005391        rs9835932       T       A       .       PASS    AA=T;DP=120     GT:GQ:DP        1|1:77:24       1|1:77:24       1|1:100:73
+8      117094955       rs1118409       G       A       .       PASS    AA=A;DP=118     GT:GQ:DP        1|1:77:24       1|1:77:24       1|1:100:75
+6      67106320        rs1708557       T       A       .       PASS    AA=A;DP=110     GT:GQ:DP        1|1:77:24       1|1:77:25       1|1:100:58
+2      39582896        rs11887676      C       A       .       PASS    AA=A;DP=120     GT:GQ:DP        1|1:77:24       1|1:78:31       1|1:100:66
+20     58713983        rs1201935       A       G       .       PASS    AA=A;DP=108     GT:GQ:DP        1|1:77:24       1|1:79:31       1|1:100:53
+7      147739790       rs6959213       C       T       .       PASS    AA=T;DP=89      GT:GQ:DP        1|1:77:24       1|1:80:25       1|1:100:40
+18     1497637 rs6505934       C       T       .       PASS    AA=T;DP=109     GT:GQ:DP        1|1:77:24       1|1:80:25       1|1:100:60
+2      178388508       rs10930811      C       T       .       PASS    AA=c;DP=88      GT:GQ:DP        1|1:77:24       1|1:80:26       1|1:100:32
+4      44540401        rs35126816      G       T       .       PASS    AA=T;DP=108     GT:GQ:DP        1|1:77:24       1|1:80:26       1|1:100:58
+13     49398410        rs2407880       C       T       .       PASS    AA=T;DP=121     GT:GQ:DP        1|1:77:24       1|1:80:26       1|1:100:73
+11     46818648        rs7128533       T       A       .       PASS    AA=A;DP=124     GT:GQ:DP        1|1:77:24       1|1:81:30       1|1:100:70
+2      184941246       rs61196908      A       G       .       PASS    AA=A;DP=99      GT:GQ:DP        1|1:77:24       1|1:83:26       1|1:100:49
+12     507853  rs4980933       C       T       .       PASS    AA=T;DP=108     GT:GQ:DP        1|1:77:24       1|1:83:26       1|1:100:56
+12     73757730        rs1458608       G       A       .       PASS    AA=G;DP=111     GT:GQ:DP        1|1:77:24       1|1:83:26       1|1:100:61
+14     61564797        rs4462520       C       T       .       PASS    AA=T;DP=128     GT:GQ:DP        1|1:77:24       1|1:83:26       1|1:100:82
+4      13550111        rs480204        A       T       .       PASS    AA=T;DP=121     GT:GQ:DP        1|1:77:24       1|1:83:27       1|1:100:65
+21     24408373        rs13050826      T       C       .       PASS    AA=-;DP=120     GT:GQ:DP        1|1:77:24       1|1:83:27       1|1:100:69
+7      103352232       rs10215035      C       G       .       PASS    AA=G;DP=135     GT:GQ:DP        1|1:77:24       1|1:83:27       1|1:100:84
+6      161438504       rs6905942       A       G       .       PASS    AA=G;DP=117     GT:GQ:DP        1|1:77:24       1|1:83:28       1|1:100:64
+2      225392410       rs7572725       A       G       .       PASS    AA=G;DP=132     GT:GQ:DP        1|1:77:24       1|1:83:28       1|1:100:80
+4      165969809       rs4254725       T       C       .       PASS    AA=C;DP=106     GT:GQ:DP        1|1:77:24       1|1:86:27       1|1:100:56
+1      99970885        rs2095784       T       G       .       PASS    AA=G;DP=123;HM2 GT:GQ:DP        1|1:77:24       1|1:86:27       1|1:100:73
+21     28416859        rs12106333      C       G       .       PASS    AA=C;DP=92      GT:GQ:DP        1|1:77:24       1|1:86:28       1|1:100:40
+1      83847801        rs6576895       T       C       .       PASS    AA=C;DP=117     GT:GQ:DP        1|1:77:24       1|1:86:28       1|1:100:63
+7      78176628        rs323175        A       C       .       PASS    AA=T;DP=113     GT:GQ:DP        1|1:77:24       1|1:89:28       1|1:100:60
+1      41332822        rs1008505       C       T       .       PASS    AA=C;DP=97;HM2  GT:GQ:DP        1|1:77:24       1|1:89:29       1|1:100:34
+19     8685871 rs301425        G       A       .       PASS    AA=A;DP=113     GT:GQ:DP        1|1:77:24       1|1:92:29       1|1:100:62
+4      80314790        rs7691709       T       C       .       PASS    AA=C;DP=122     GT:GQ:DP        1|1:77:24       1|1:92:29       1|1:100:63
+3      67870672        rs9867751       A       T       .       PASS    AA=T;DP=123     GT:GQ:DP        1|1:77:24       1|1:92:29       1|1:100:70
+21     38436961        rs2836168       G       A       .       PASS    AA=A;DP=119     GT:GQ:DP        1|1:77:24       1|1:92:30       1|1:100:66
+3      108820218       rs1698331       T       C       .       PASS    AA=t;DP=111     GT:GQ:DP        1|1:77:24       1|1:92:31       1|1:100:52
+18     34210044        rs1511941       A       G       .       PASS    AA=G;DP=102     GT:GQ:DP        1|1:77:24       1|1:93:31       1|1:100:34
+6      5957923 rs927501        T       C       .       PASS    AA=C;DP=118     GT:GQ:DP        1|1:77:25       1|1:100:34      1|1:100:58
+11     56376308        rs512508        A       G       .       PASS    AA=N;DP=113     GT:GQ:DP        1|1:77:25       1|1:100:35      1|1:100:55
+11     2277669 rs2521268       T       C       .       PASS    AA=N;DP=74      GT:GQ:DP        1|1:77:25       1|1:20:6        1|1:100:36
+17     73200338        rs9895647       A       C       .       PASS    AA=C;DP=112     GT:GQ:DP        1|1:77:25       1|1:27:18       1|1:100:70
+5      54098548        rs7709225       T       C       .       PASS    AA=A;DP=94      GT:GQ:DP        1|1:77:25       1|1:29:19       1|1:100:50
+19     3139316 rs485528        A       G       .       PASS    AA=a;DP=86      GT:GQ:DP        1|1:77:25       1|1:29:8        1|1:100:48
+16     84553581        rs11642456      T       G       .       PASS    AA=G;DP=107     GT:GQ:DP        1|1:77:25       1|1:32:16       1|1:100:67
+21     19127656        rs8128248       A       G       .       PASS    AA=A;DP=95      GT:GQ:DP        1|1:77:25       1|1:35:11       1|1:100:44
+5      175848441       rs2963667       C       T       .       PASS    AA=T;DP=93      GT:GQ:DP        1|1:77:25       1|1:35:12       1|1:100:57
+7      157740485       rs10248148      C       T       .       PASS    AA=T;DP=121     GT:GQ:DP        1|1:77:25       1|1:39:19       1|1:100:75
+2      227016889       rs6436625       T       G       .       PASS    AA=g;DP=117     GT:GQ:DP        1|1:77:25       1|1:43:18       1|1:100:75
+18     63627456        rs625233        A       C       .       PASS    AA=C;DP=91      GT:GQ:DP        1|1:77:25       1|1:44:13       1|1:100:53
+5      173645206       rs2936994       A       C       .       PASS    AA=C;DP=118     GT:GQ:DP        1|1:77:25       1|1:44:23       1|1:100:68
+9      28467082        rs10757744      G       T       .       PASS    AA=T;DP=96      GT:GQ:DP        1|1:77:25       1|1:47:14       1|1:100:58
+3      168504165       rs4129667       G       A       .       PASS    AA=A;DP=95      GT:GQ:DP        1|1:77:25       1|1:47:14       1|1:100:59
+14     88105112        rs7141591       A       C       .       PASS    AA=C;DP=102     GT:GQ:DP        1|1:77:25       1|1:47:15       1|1:100:61
+2      82618252        rs7602318       T       C       .       PASS    AA=N;DP=113     GT:GQ:DP        1|1:77:25       1|1:47:17       1|1:100:70
+3      66918072        rs7635053       A       C       .       PASS    AA=C;DP=121     GT:GQ:DP        1|1:77:25       1|1:49:26       1|1:100:74
+1      70761745        rs2651239       G       A       .       PASS    AA=A;DP=74;HM2  GT:GQ:DP        1|1:77:25       1|1:4:13        1|1:85:37
+4      179294338       rs485807        C       T       .       PASS    AA=T;DP=95      GT:GQ:DP        1|1:77:25       1|1:50:15       1|1:100:56
+12     75250419        rs7955549       G       A       .       PASS    AA=A;DP=81      GT:GQ:DP        1|1:77:25       1|1:53:16       1|1:100:40
+6      104927329       rs156118        T       C       .       PASS    AA=C;DP=106     GT:GQ:DP        1|1:77:25       1|1:53:16       1|1:100:66
+4      100622435       rs2851022       A       G       .       PASS    AA=G;DP=111     GT:GQ:DP        1|1:77:25       1|1:56:18       1|1:100:69
+2      177902034       rs10930786      G       A       .       PASS    AA=G;DP=108     GT:GQ:DP        1|1:77:25       1|1:57:25       1|1:100:49
+17     4893658 rs389855        A       G       .       PASS    AA=G;DP=101     GT:GQ:DP        1|1:77:25       1|1:59:19       1|1:100:47
+15     98468835        rs8039563       A       C       .       PASS    AA=a;DP=116     GT:GQ:DP        1|1:77:25       1|1:60:30       1|1:100:62
+12     52538297        rs10783609      T       C       .       PASS    AA=T;DP=127     GT:GQ:DP        1|1:77:25       1|1:62:19       1|1:100:84
+19     35144863        rs1559082       A       G       .       PASS    AA=A;DP=104     GT:GQ:DP        1|1:77:25       1|1:62:20       1|1:100:57
+18     50539330        rs13381537      A       C       .       PASS    AA=C;DP=111     GT:GQ:DP        1|1:77:25       1|1:62:20       1|1:100:68
+3      107982852       rs4895027       T       C       .       PASS    AA=C;DP=105     GT:GQ:DP        1|1:77:25       1|1:65:20       1|1:100:60
+12     30615233        rs1682421       T       C       .       PASS    AA=C;DP=105     GT:GQ:DP        1|1:77:25       1|1:65:20       1|1:100:62
+8      10355536        rs6601464       G       A       .       PASS    AA=A;DP=114     GT:GQ:DP        1|1:77:25       1|1:65:20       1|1:100:69
+12     100709880       rs4764653       C       T       .       PASS    AA=T;DP=123     GT:GQ:DP        1|1:77:25       1|1:65:20       1|1:100:78
+5      155704457       rs9313890       G       A       .       PASS    AA=A;DP=126     GT:GQ:DP        1|1:77:25       1|1:65:21       1|1:100:77
+6      70186168        rs2183068       C       T       .       PASS    AA=T;DP=117     GT:GQ:DP        1|1:77:25       1|1:66:28       1|1:100:63
+16     57319812        rs185397        A       G       .       PASS    AA=G;DP=125     GT:GQ:DP        1|1:77:25       1|1:68:21       1|1:100:81
+17     66619268        rs8071558       C       G       .       PASS    AA=G;DP=99      GT:GQ:DP        1|1:77:25       1|1:68:22       1|1:100:52
+10     83140922        rs531272        T       A       .       PASS    AA=A;DP=110     GT:GQ:DP        1|1:77:25       1|1:68:22       1|1:100:60
+19     57777085        rs454950        T       C       .       PASS    AA=t;DP=93      GT:GQ:DP        1|1:77:25       1|1:74:24       1|1:100:45
+5      103349963       rs319134        G       A       .       PASS    AA=N;DP=130     GT:GQ:DP        1|1:77:25       1|1:74:24       1|1:100:82
+18     56493282        rs12967617      T       C       .       PASS    AA=T;DP=118     GT:GQ:DP        1|1:77:25       1|1:77:27       1|1:100:64
+4      111605647       rs6848906       T       C       .       PASS    AA=-;DP=137     GT:GQ:DP        1|1:77:25       1|1:78:40       1|1:100:75
+7      69858059        rs4718995       T       C       .       PASS    AA=C;DP=107     GT:GQ:DP        1|1:77:25       1|1:80:25       1|1:100:54
+3      123674962       rs4434100       C       G       .       PASS    AA=G;DP=123     GT:GQ:DP        1|1:77:25       1|1:80:25       1|1:100:70
+5      26525234        rs248022        A       C       .       PASS    AA=A;DP=138     GT:GQ:DP        1|1:77:25       1|1:80:25       1|1:100:89
+12     72489819        rs1530137       G       C       .       PASS    AA=C;DP=102     GT:GQ:DP        1|1:77:25       1|1:80:26       1|1:100:51
+11     125146814       rs522877        G       A       .       PASS    AA=A;DP=128     GT:GQ:DP        1|1:77:25       1|1:86:27       1|1:100:64
+4      182813882       rs930405        G       C       .       PASS    AA=A;DP=126     GT:GQ:DP        1|1:77:25       1|1:92:30       1|1:100:75
+2      178426084       rs1898588       G       T       .       PASS    AA=N;DP=112     GT:GQ:DP        1|1:77:25       1|1:95:30       1|1:100:60
+5      56645022        rs255237        C       T       .       PASS    AA=c;DP=134     GT:GQ:DP        1|1:77:25       1|1:98:31       1|1:100:76
+2      112572636       rs4849007       C       A       .       PASS    AA=A;DP=110     GT:GQ:DP        1|1:77:25       1|1:98:32       1|1:100:53
+2      147863685       rs1837422       C       G       .       PASS    AA=G;DP=105     GT:GQ:DP        1|1:77:26       1|1:18:15       1|1:100:61
+9      130598192       rs6478850       A       G       .       PASS    AA=G;DP=81      GT:GQ:DP        1|1:77:26       1|1:34:16       1|1:100:28
+2      71881366        rs10206242      G       A       .       PASS    AA=A;DP=96      GT:GQ:DP        1|1:77:26       1|1:35:10       1|1:100:59
+7      106951570       rs10244294      T       C       .       PASS    AA=C;DP=91      GT:GQ:DP        1|1:77:26       1|1:37:17       1|1:100:39
+5      1526560 rs28336 T       C       .       PASS    AA=C;DP=104     GT:GQ:DP        1|1:77:26       1|1:41:13       1|1:100:66
+14     78883082        rs2197995       T       C       .       PASS    AA=C;DP=107     GT:GQ:DP        1|1:77:26       1|1:47:14       1|1:100:71
+2      53072278        rs13399527      C       T       .       PASS    AA=T;DP=101     GT:GQ:DP        1|1:77:26       1|1:47:15       1|1:100:58
+16     8950102 rs1871210       A       G       .       PASS    AA=-;DP=101     GT:GQ:DP        1|1:77:26       1|1:50:15       1|1:100:59
+7      63925034        rs11978309      G       A       .       PASS    AA=N;DP=115     GT:GQ:DP        1|1:77:26       1|1:64:24       1|1:100:66
+4      163549640       rs11100441      A       G       .       PASS    AA=N;DP=108     GT:GQ:DP        1|1:77:26       1|1:65:20       1|1:100:50
+16     71835090        rs4129177       G       C       .       PASS    AA=C;DP=102     GT:GQ:DP        1|1:77:26       1|1:65:21       1|1:100:56
+3      11982910        rs438129        T       C       .       PASS    AA=C;DP=108     GT:GQ:DP        1|1:77:26       1|1:68:21       1|1:100:63
+18     37153189        rs7228663       C       G       .       PASS    AA=G;DP=109     GT:GQ:DP        1|1:77:26       1|1:80:26       1|1:100:57
+3      67741499        rs935735        T       C       .       PASS    AA=T;DP=130     GT:GQ:DP        1|1:77:26       1|1:86:28       1|1:100:76
+3      159032263       rs1464114       G       A       .       PASS    AA=A;DP=98      GT:GQ:DP        1|1:77:26       1|1:92:32       1|1:100:40
+1      199349966       rs3738262       A       G       .       PASS    AA=a;DP=86;HM2;HM3      GT:GQ:DP        1|1:77:27       1|1:44:13       1|1:100:38
+X      1924187 rs6588868       T       C       .       PASS    AA=.;DP=78      GT:GQ:DP        1|1:77:27       1|1:44:14       1|1:100:35
+4      30763678        rs6818974       G       A       .       PASS    AA=A;DP=94      GT:GQ:DP        1|1:77:27       1|1:47:14       1|1:100:54
+7      14003188        rs10262618      G       C       .       PASS    AA=C;DP=104     GT:GQ:DP        1|1:77:27       1|1:51:22       1|1:100:55
+4      29155884        rs1441686       C       A       .       PASS    AA=A;DP=105     GT:GQ:DP        1|1:77:27       1|1:77:24       1|1:100:53
+14     37682665        rs2415452       A       G       .       PASS    AA=G;DP=113     GT:GQ:DP        1|1:77:27       1|1:77:24       1|1:100:63
+2      241768843       rs4675828       G       A       .       PASS    AA=A;DP=109     GT:GQ:DP        1|1:77:28       0|1:4:18        1|0:100:53
+11     25985104        rs4144308       A       T       .       PASS    AA=T;DP=105     GT:GQ:DP        1|1:77:28       1|1:38:11       1|1:100:63
+20     55019983        rs1276337       T       C       .       PASS    AA=t;DP=110     GT:GQ:DP        1|1:77:30       1|1:47:14       1|1:100:57
+7      136740873       rs1731941       A       G       .       PASS    AA=G;DP=128     GT:GQ:DP        1|1:77:30       1|1:80:26       1|1:100:73
+4      128840722       rs12331481      A       C       .       PASS    AA=C;DP=91      GT:GQ:DP        1|1:77:31       1|1:56:17       1|1:100:42
+8      30440520        rs10107489      C       A       .       PASS    AA=A;DP=139     GT:GQ:DP        1|1:77:31       1|1:92:35       1|1:100:75
+3      25542084        rs1286756       G       A       .       PASS    AA=A;DP=149     GT:GQ:DP        1|1:77:32       1|1:86:27       1|1:100:92
+11     115729455       rs483448        A       G       .       PASS    AA=G;DP=123     GT:GQ:DP        1|1:77:32       1|1:98:31       1|1:100:62
+7      107451682       rs1616041       C       T       .       PASS    AA=C;DP=118     GT:GQ:DP        1|1:77:33       1|0:95:23       1|1:100:65
+16     7220963 rs4786987       T       C       .       PASS    AA=C;DP=123     GT:GQ:DP        1|1:77:33       1|1:52:27       1|1:100:64
+7      35801170        rs10251609      T       C       .       PASS    AA=T;DP=118     GT:GQ:DP        1|1:77:33       1|1:77:26       1|1:100:47
+6      12013768        rs209789        A       G       .       PASS    AA=G;DP=114     GT:GQ:DP        1|1:77:34       1|1:59:29       1|1:100:55
+17     33134218        rs2189303       A       G       .       PASS    AA=G;DP=120     GT:GQ:DP        1|1:77:35       1|1:47:14       1|1:100:69
+7      109026663       rs2396137       T       C       .       PASS    AA=N;DP=117     GT:GQ:DP        1|1:77:35       1|1:68:23       1|1:100:60
+2      174416445       rs1024125       T       C       .       PASS    AA=C;DP=146     GT:GQ:DP        1|1:77:35       1|1:98:32       1|1:100:80
+19     58766888        rs6509792       A       C       .       PASS    AA=A;DP=144     GT:GQ:DP        1|1:77:36       0|0:75:25       1|0:100:79
+21     41785620        .       G       A       .       PASS    AA=G;DP=131     GT:GQ:DP        1|1:77:39       1|0:100:21      1|1:100:68
+16     80320441        rs11150403      T       C       .       PASS    AA=C;DP=139     GT:GQ:DP        1|1:77:42       1|0:59:23       1|1:100:72
+6      63781304        rs2185573       T       C       .       PASS    AA=C;DP=109     GT:GQ:DP        1|1:78:25       1|1:71:22       1|1:100:62
+1      205550561       rs2661357       A       T       .       PASS    AA=A;DP=79      GT:GQ:DP        1|1:78:26       1|0:100:12      1|1:87:41
+12     9468577 rs7296629       A       C       .       PASS    AA=C;DP=89      GT:GQ:DP        1|1:78:26       1|0:100:15      1|1:100:36
+8      13559519        rs7011257       C       T       .       PASS    AA=T;DP=96      GT:GQ:DP        1|1:78:26       1|0:100:15      1|1:100:45
+5      33149880        rs60558643      T       C       .       PASS    AA=T;DP=78      GT:GQ:DP        1|1:78:26       1|0:100:16      1|1:66:23
+2      235728807       rs9287586       T       C       .       PASS    AA=C;DP=97      GT:GQ:DP        1|1:78:26       1|0:100:17      1|1:100:43
+7      52507832        rs6948820       G       A       .       PASS    AA=A;DP=89      GT:GQ:DP        1|1:78:26       1|0:100:17      1|1:100:46
+11     126221849       rs10893588      T       C       .       PASS    AA=T;DP=94      GT:GQ:DP        1|1:78:26       1|0:100:17      1|1:100:50
+7      69959579        rs1527588       C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        1|1:78:26       1|0:100:18      1|1:100:72
+4      12692225        rs525340        C       A       .       PASS    AA=A;DP=87      GT:GQ:DP        1|1:78:26       1|0:100:18      1|1:99:33
+6      104269918       rs9377567       A       C       .       PASS    AA=C;DP=86      GT:GQ:DP        1|1:78:26       1|0:100:19      1|1:100:42
+4      33765493        rs7665275       G       C       .       PASS    AA=C;DP=102     GT:GQ:DP        1|1:78:26       1|0:100:19      1|1:100:58
+10     55259344        rs4417176       C       T       .       PASS    AA=T;DP=94      GT:GQ:DP        1|1:78:26       1|0:100:20      1|1:81:27
+4      130969296       rs4623018       A       G       .       PASS    AA=A;DP=101     GT:GQ:DP        1|1:78:26       1|0:100:21      1|1:100:53
+8      16150875        rs6530948       A       T       .       PASS    AA=T;DP=102     GT:GQ:DP        1|1:78:26       1|0:100:21      1|1:100:56
+13     57639596        rs9537956       A       G       .       PASS    AA=G;DP=114     GT:GQ:DP        1|1:78:26       1|0:100:22      1|1:100:67
+10     66557667        rs10822464      T       G       .       PASS    AA=T;DP=113     GT:GQ:DP        1|1:78:26       1|0:100:23      1|1:100:65
+12     97872644        rs1403503       T       A       .       PASS    AA=A;DP=114     GT:GQ:DP        1|1:78:26       1|0:100:24      1|1:100:67
+1      63818729        rs217458        T       G       .       PASS    AA=T;DP=116     GT:GQ:DP        1|1:78:26       1|0:100:24      1|1:100:68
+3      174138044       rs7612017       G       C       .       PASS    AA=G;DP=123     GT:GQ:DP        1|1:78:26       1|0:100:24      1|1:100:75
+3      159568449       rs7627082       T       C       .       PASS    AA=T;DP=112     GT:GQ:DP        1|1:78:26       1|0:100:25      1|1:100:62
+3      68328167        rs1388492       C       T       .       PASS    AA=T;DP=124     GT:GQ:DP        1|1:78:26       1|0:100:25      1|1:100:75
+2      157043862       rs298226        T       G       .       PASS    AA=G;DP=126     GT:GQ:DP        1|1:78:26       1|0:100:26      1|1:100:62
+15     52599454        rs481568        G       C       .       PASS    AA=C;DP=106     GT:GQ:DP        1|1:78:26       1|0:100:27      1|1:100:55
+2      222109868       rs2952833       A       G       .       PASS    AA=G;DP=137     GT:GQ:DP        1|1:78:26       1|0:100:27      1|1:100:82
+11     109880471       rs1553733       A       G       .       PASS    AA=G;DP=102     GT:GQ:DP        1|1:78:26       1|0:100:27      1|1:99:49
+20     5237816 rs5012082       G       A       .       PASS    AA=g;DP=98      GT:GQ:DP        1|1:78:26       1|0:100:28      1|1:100:40
+2      228747047       rs7570716       T       C       .       PASS    AA=T;DP=118     GT:GQ:DP        1|1:78:26       1|0:100:28      1|1:100:63
+22     40538618        rs6002503       A       G       .       PASS    AA=G;DP=109     GT:GQ:DP        1|1:78:26       1|0:100:29      1|1:100:52
+3      69402193        rs2046374       G       A       .       PASS    AA=G;DP=120     GT:GQ:DP        1|1:78:26       1|0:100:30      1|1:100:68
+3      143907715       .       A       G       .       PASS    AA=A;DP=74      GT:GQ:DP        1|1:78:26       1|0:57:15       1|1:66:22
+14     98558973        rs1257658       T       G       .       PASS    AA=G;DP=138     GT:GQ:DP        1|1:78:26       1|0:63:18       1|1:100:92
+3      72345123        rs13325039      G       A       .       PASS    AA=N;DP=108     GT:GQ:DP        1|1:78:26       1|0:80:14       1|1:100:69
+11     111891995       rs949341        G       A       .       PASS    AA=A;DP=95      GT:GQ:DP        1|1:78:26       1|0:81:14       1|1:100:44
+5      122378198       rs7716236       G       C       .       PASS    AA=G;DP=113     GT:GQ:DP        1|1:78:26       1|0:88:28       1|1:100:62
+4      73846592        rs7693945       T       C       .       PASS    AA=T;DP=118     GT:GQ:DP        1|1:78:26       1|0:90:27       1|1:100:63
+18     20669423        rs17260247      G       C       .       PASS    AA=G;DP=121     GT:GQ:DP        1|1:78:26       1|0:90:30       1|1:100:68
+16     87936953        rs2170839       C       G       .       PASS    AA=g;DP=95      GT:GQ:DP        1|1:78:26       1|0:94:12       1|1:94:47
+2      109387776       .       T       C       .       PASS    AA=T;DP=117     GT:GQ:DP        1|1:78:26       1|0:96:17       1|1:100:73
+20     10061725        rs659946        C       T       .       PASS    AA=C;DP=123     GT:GQ:DP        1|1:78:27       0|1:100:17      1|0:100:83
+1      77327130        rs199715        G       A       .       PASS    AA=A;DP=116     GT:GQ:DP        1|1:78:27       0|1:100:18      1|0:100:31
+2      137592445       rs1560579       T       C       .       PASS    AA=C;DP=98      GT:GQ:DP        1|1:78:27       0|1:100:18      1|0:100:51
+10     114527342       rs4244303       T       C       .       PASS    AA=t;DP=122     GT:GQ:DP        1|1:78:27       0|1:100:19      1|0:100:76
+8      110577414       rs1783162       C       T       .       PASS    AA=T;DP=106     GT:GQ:DP        1|1:78:27       0|1:100:20      1|0:100:55
+10     117954655       .       G       C       .       PASS    AA=G;DP=106     GT:GQ:DP        1|1:78:27       0|1:100:20      1|0:100:59
+4      124175123       rs4264846       G       A       .       PASS    AA=G;DP=122     GT:GQ:DP        1|1:78:27       0|1:100:21      1|0:100:74
+10     8866174 rs2991810       C       T       .       PASS    AA=T;DP=106     GT:GQ:DP        1|1:78:27       0|1:100:23      1|0:100:60
+7      80776691        rs12533370      T       C       .       PASS    AA=C;DP=112     GT:GQ:DP        1|1:78:27       0|1:100:23      1|0:100:60
+3      193956854       rs6777745       C       A       .       PASS    AA=A;DP=127     GT:GQ:DP        1|1:78:27       0|1:100:23      1|0:100:75
+4      181885444       rs17195091      C       A       .       PASS    AA=C;DP=109     GT:GQ:DP        1|1:78:27       0|1:100:24      1|0:100:60
+11     70339792        rs895203        G       C       .       PASS    AA=C;DP=124     GT:GQ:DP        1|1:78:27       0|1:100:24      1|0:100:75
+6      126508298       rs4363059       A       T       .       PASS    AA=T;DP=142     GT:GQ:DP        1|1:78:27       0|1:100:24      1|0:100:93
+8      113781052       .       C       T       .       PASS    AA=C;DP=137     GT:GQ:DP        1|1:78:27       0|1:100:25      1|0:100:39
+6      96100875        rs4559095       A       C       .       PASS    AA=C;DP=105     GT:GQ:DP        1|1:78:27       0|1:100:27      1|0:100:52
+4      158610435       rs1434385       C       G       .       PASS    AA=C;DP=127     GT:GQ:DP        1|1:78:27       0|1:100:28      1|0:100:73
+9      101788018       rs10760708      C       A       .       PASS    AA=C;DP=98      GT:GQ:DP        1|1:78:27       0|1:100:29      1|0:100:31
+11     134328235       rs11224106      T       G       .       PASS    AA=T;DP=110     GT:GQ:DP        1|1:78:27       0|1:100:30      1|0:100:56
+12     89229968        rs862233        C       T       .       PASS    AA=C;DP=113     GT:GQ:DP        1|1:78:27       0|1:100:30      1|0:100:56
+16     6052999 rs35735593      G       C       .       PASS    AA=G;DP=122     GT:GQ:DP        1|1:78:27       0|1:100:30      1|0:100:64
+13     42273219        rs1570678       T       C       .       PASS    AA=C;DP=121     GT:GQ:DP        1|1:78:27       0|1:100:32      1|0:100:61
+9      102611209       rs1338729       A       G       .       PASS    AA=G;DP=165     GT:GQ:DP        1|1:78:27       0|1:100:39      1|0:100:55
+6      125386254       rs6905212       G       A       .       PASS    AA=A;DP=111     GT:GQ:DP        1|1:78:27       0|1:35:27       1|0:100:55
+8      146039398       rs1735408       T       C       .       PASS    AA=C;DP=114     GT:GQ:DP        1|1:78:27       0|1:42:21       1|0:100:68
+3      110478763       rs34914976      T       C       .       PASS    AA=C;DP=107     GT:GQ:DP        1|1:78:27       0|1:47:13       1|0:100:67
+5      123648314       rs166279        T       C       .       PASS    AA=T;DP=144     GT:GQ:DP        1|1:78:27       0|1:51:25       1|0:100:93
+16     6869537 rs2172308       G       T       .       PASS    AA=T;DP=118     GT:GQ:DP        1|1:78:27       0|1:60:18       1|0:100:74
+22     47432483        rs5771883       T       G       .       PASS    AA=T;DP=103     GT:GQ:DP        1|1:78:27       0|1:61:10       1|0:100:64
+11     32380872        rs5030241       A       T       .       PASS    AA=T;DP=118     GT:GQ:DP        1|1:78:27       0|1:62:23       1|0:100:67
+6      155855586       rs4869856       A       G       .       PASS    AA=a;DP=110     GT:GQ:DP        1|1:78:27       0|1:63:17       1|0:100:67
+7      2516580 rs893238        G       C       .       PASS    AA=C;DP=107     GT:GQ:DP        1|1:78:27       0|1:65:14       1|0:100:66
+11     91591990        rs10741440      T       A       .       PASS    AA=T;DP=97      GT:GQ:DP        1|1:78:27       0|1:66:11       1|0:100:57
+3      42502994        rs600792        A       C       .       PASS    AA=A;DP=114     GT:GQ:DP        1|1:78:27       0|1:75:23       1|0:100:62
+16     58012468        .       C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        1|1:78:27       0|1:75:25       1|0:100:70
+16     26496945        rs2428137       G       C       .       PASS    AA=C;DP=119     GT:GQ:DP        1|1:78:27       0|1:82:22       1|0:100:72
+13     93195700        rs9524187       T       C       .       PASS    AA=C;DP=126     GT:GQ:DP        1|1:78:27       0|1:82:22       1|0:100:79
+2      11440586        rs12692442      T       A       .       PASS    AA=A;DP=131     GT:GQ:DP        1|1:78:27       0|1:84:25       1|0:100:77
+13     48927476        rs4942831       G       A       .       PASS    AA=G;DP=112     GT:GQ:DP        1|1:78:27       0|1:86:23       1|0:100:65
+4      96144426        rs1154847       A       G       .       PASS    AA=A;DP=95      GT:GQ:DP        1|1:78:27       0|1:89:21       1|0:100:48
+16     57541134        rs1437171       T       C       .       PASS    AA=t;DP=140     GT:GQ:DP        1|1:78:27       0|1:89:22       1|0:100:51
+17     58516222        .       A       G       .       PASS    AA=A;DP=112     GT:GQ:DP        1|1:78:27       0|1:89:22       1|0:100:61
+12     83517702        rs7138288       T       A       .       PASS    AA=A;DP=125     GT:GQ:DP        1|1:78:27       0|1:95:17       1|0:100:69
+4      5432589 rs12641778      T       A       .       PASS    AA=T;DP=126     GT:GQ:DP        1|1:78:27       0|1:98:18       1|0:100:84
+1      207949624       rs2282739       C       T       .       PASS    AA=T;DP=136;HM2;HM3     GT:GQ:DP        1|1:78:27       0|1:98:22       1|0:100:42
+13     54976820        rs4597205       A       G       .       PASS    AA=G;DP=84      GT:GQ:DP        1|1:78:27       1|0:100:15      1|1:100:42
+4      161048335       rs4414908       T       C       .       PASS    AA=t;DP=108     GT:GQ:DP        1|1:78:27       1|0:100:22      1|1:100:60
+4      67544052        rs6850626       T       C       .       PASS    AA=T;DP=97      GT:GQ:DP        1|1:78:27       1|0:100:23      1|1:100:48
+1      20030828        rs4509550       T       C       .       PASS    AA=C;DP=125;HM2;HM3     GT:GQ:DP        1|1:78:27       1|0:100:25      1|1:100:62
+2      41240258        rs7606709       C       T       .       PASS    AA=T;DP=124     GT:GQ:DP        1|1:78:27       1|0:100:25      1|1:100:72
+12     128040120       rs3893975       T       C       .       PASS    AA=C;DP=126     GT:GQ:DP        1|1:78:27       1|0:100:25      1|1:100:75
+2      121127900       rs13412688      G       A       .       PASS    AA=A;DP=118     GT:GQ:DP        1|1:78:27       1|0:26:19       1|1:100:72
+16     54341548        rs28760551      A       G       .       PASS    AA=a;DP=120     GT:GQ:DP        1|1:78:27       1|0:70:19       1|1:100:73
+17     65611201        rs9895008       C       T       .       PASS    AA=C;DP=114     GT:GQ:DP        1|1:78:27       1|0:71:18       1|1:100:68
+8      136186146       rs7829750       A       T       .       PASS    AA=T;DP=107     GT:GQ:DP        1|1:78:27       1|0:76:14       1|1:78:27
+8      15847561        rs7009324       C       T       .       PASS    AA=T;DP=136     GT:GQ:DP        1|1:78:27       1|0:80:30       1|1:100:80
+13     47103843        rs2766099       G       A       .       PASS    AA=G;DP=96      GT:GQ:DP        1|1:78:27       1|0:86:15       1|1:97:48
+15     67244233        rs6494786       A       G       .       PASS    AA=G;DP=95      GT:GQ:DP        1|1:78:27       1|0:97:14       1|1:73:38
+17     1077337 rs9890076       C       T       .       PASS    AA=T;DP=103     GT:GQ:DP        1|1:78:28       0|1:100:14      1|0:100:63
+1      228719639       rs6660476       T       C       .       PASS    AA=T;DP=116     GT:GQ:DP        1|1:78:28       0|1:100:16      1|0:100:73
+11     120066204       rs10790402      G       A       .       PASS    AA=A;DP=151     GT:GQ:DP        1|1:78:28       0|1:100:23      1|0:100:55
+18     22181914        rs1791759       T       C       .       PASS    AA=C;DP=122     GT:GQ:DP        1|1:78:28       0|1:100:25      1|0:100:65
+1      220892384       rs2936019       G       A       .       PASS    AA=A;DP=123     GT:GQ:DP        1|1:78:28       0|1:100:26      1|0:100:65
+4      8296861 rs1281100       A       G       .       PASS    AA=G;DP=137     GT:GQ:DP        1|1:78:28       0|1:100:27      1|0:100:71
+1      229378712       rs9431661       A       G       .       PASS    AA=G;DP=141     GT:GQ:DP        1|1:78:28       0|1:100:28      1|0:100:88
+17     18815445        rs916823        C       G       .       PASS    AA=G;DP=105     GT:GQ:DP        1|1:78:28       0|1:10:8        1|0:100:71
+10     119256353       rs10886086      T       C       .       PASS    AA=T;DP=131     GT:GQ:DP        1|1:78:28       0|1:35:20       1|0:100:83
+11     91733266        rs4506607       G       A       .       PASS    AA=g;DP=99      GT:GQ:DP        1|1:78:28       0|1:43:17       1|0:100:53
+13     18716436        rs600635        G       A       .       PASS    AA=A;DP=142     GT:GQ:DP        1|1:78:28       0|1:67:19       1|0:100:100
+16     54934144        rs28446942      T       C       .       PASS    AA=C;DP=101     GT:GQ:DP        1|1:78:28       0|1:78:16       1|0:100:57
+2      109623331       rs10185681      T       C       .       PASS    AA=T;DP=106     GT:GQ:DP        1|1:78:28       0|1:85:15       1|0:100:61
+4      16027312        rs6449247       T       A       .       PASS    AA=T;DP=109     GT:GQ:DP        1|1:78:28       0|1:87:15       1|0:100:69
+12     7548589 rs11054197      A       G       .       PASS    AA=G;DP=124     GT:GQ:DP        1|1:78:28       0|1:89:21       1|0:100:76
+4      103695201       rs230510        A       T       .       PASS    AA=T;DP=99      GT:GQ:DP        1|1:78:28       1|0:100:20      1|1:69:49
+12     17635115        rs1163787       A       G       .       PASS    AA=G;DP=114     GT:GQ:DP        1|1:78:28       1|0:100:23      1|1:100:65
+3      188765243       rs2601000       A       G       .       PASS    AA=G;DP=120     GT:GQ:DP        1|1:78:28       1|0:100:29      1|1:100:64
+9      26623841        rs10812432      A       G       .       PASS    AA=A;DP=83      GT:GQ:DP        1|1:78:28       1|0:44:14       1|1:100:41
+9      12832366        rs495637        T       G       .       PASS    AA=T;DP=121     GT:GQ:DP        1|1:78:28       1|0:89:26       1|1:100:58
+1      228486993       rs4846948       T       C       .       PASS    AA=C;DP=114;HM2 GT:GQ:DP        1|1:78:28       1|0:93:18       1|1:100:64
+8      103582456       rs4734628       G       T       .       PASS    AA=T;DP=126     GT:GQ:DP        1|1:78:29       0|0:57:20       1|0:100:80
+5      32222436        rs336514        A       G       .       PASS    AA=G;DP=114     GT:GQ:DP        1|1:78:29       0|1:100:18      1|0:100:69
+8      90946574        rs381456        A       T       .       PASS    AA=T;DP=111     GT:GQ:DP        1|1:78:29       0|1:100:19      1|0:100:61
+17     52055690        rs758304        T       C       .       PASS    AA=N;DP=125     GT:GQ:DP        1|1:78:29       0|1:100:29      1|0:100:69
+7      89440098        rs10246210      T       G       .       PASS    AA=T;DP=130     GT:GQ:DP        1|1:78:29       0|1:100:30      1|0:100:70
+5      42565305        rs13166285      A       G       .       PASS    AA=G;DP=127     GT:GQ:DP        1|1:78:29       0|1:69:35       1|0:100:63
+13     42457804        rs1886153       G       A       .       PASS    AA=A;DP=133     GT:GQ:DP        1|1:78:29       0|1:96:22       1|0:100:78
+8      27320027        rs3779632       T       C       .       PASS    AA=C;DP=100     GT:GQ:DP        1|1:78:30       0|1:64:22       1|0:100:51
+13     36098061        rs605420        A       G       .       PASS    AA=C;DP=113     GT:GQ:DP        1|1:78:30       1|1:65:20       1|1:100:65
+2      235047089       rs6731017       T       C       .       PASS    AA=C;DP=104     GT:GQ:DP        1|1:78:31       1|1:44:15       1|1:100:58
+12     83172838        rs987151        A       G       .       PASS    AA=A;DP=128     GT:GQ:DP        1|1:78:31       1|1:71:22       1|1:100:76
+1      48978910        rs2054727       T       A       .       PASS    AA=T;DP=100     GT:GQ:DP        1|1:78:32       0|1:100:14      1|0:100:54
+8      56422954        rs16921658      G       A       .       PASS    AA=A;DP=112     GT:GQ:DP        1|1:78:33       0|1:100:25      1|0:100:53
+20     60061824        rs6061990       T       G       .       PASS    AA=T;DP=90      GT:GQ:DP        1|1:78:33       1|0:44:9        1|1:100:43
+8      110917406       rs62527997      T       A       .       PASS    AA=A;DP=116     GT:GQ:DP        1|1:78:33       1|0:84:28       1|1:100:53
+3      162099054       rs6441336       C       A       .       PASS    AA=A;DP=128     GT:GQ:DP        1|1:78:33       1|1:50:15       1|1:100:77
+4      167302956       rs10517879      T       G       .       PASS    AA=G;DP=106     GT:GQ:DP        1|1:78:34       0|0:52:24       1|0:100:49
+7      131751233       rs10235318      C       T       .       PASS    AA=T;DP=148     GT:GQ:DP        1|1:78:34       0|1:100:29      1|0:100:43
+13     65534234        rs687772        G       T       .       PASS    AA=T;DP=109     GT:GQ:DP        1|1:78:34       0|1:91:22       1|0:100:42
+12     92756108        rs7314748       T       C       .       PASS    AA=T;DP=141     GT:GQ:DP        1|1:78:35       0|0:78:26       1|0:100:81
+16     75609634        rs283999        T       C       .       PASS    AA=C;DP=134     GT:GQ:DP        1|1:78:35       1|1:100:34      1|1:100:68
+12     119282843       rs1179447       T       A       .       PASS    AA=A;DP=127     GT:GQ:DP        1|1:78:35       1|1:92:30       1|1:100:59
+5      100456746       rs478519        T       C       .       PASS    AA=C;DP=150     GT:GQ:DP        1|1:78:36       1|1:100:33      1|1:100:81
+19     18652768        rs11883401      C       G       .       PASS    AA=c;DP=89      GT:GQ:DP        1|1:78:36       1|1:35:11       1|1:100:44
+1      16183818        rs7516754       T       C       .       PASS    AA=T;DP=129;HM2;HM3     GT:GQ:DP        1|1:78:36       1|1:40:26       1|1:100:67
+13     19783935        rs9509135       C       G       .       PASS    AA=g;DP=104     GT:GQ:DP        1|1:78:36       1|1:59:19       1|1:100:49
+8      54289715        rs6473794       T       C       .       PASS    AA=C;DP=139     GT:GQ:DP        1|1:78:36       1|1:62:19       1|1:100:84
+7      57410232        rs4870602       A       C       .       PASS    AA=a;DP=129     GT:GQ:DP        1|1:78:36       1|1:62:21       1|1:100:58
+8      29585981        rs7000693       A       C       .       PASS    AA=A;DP=138     GT:GQ:DP        1|1:78:36       1|1:71:22       1|1:100:82
+15     95969676        rs288424        A       G       .       PASS    AA=G;DP=145     GT:GQ:DP        1|1:78:36       1|1:83:29       1|1:100:77
+10     12920206        rs1644410       T       C       .       PASS    AA=T;DP=155     GT:GQ:DP        1|1:78:39       0|1:100:29      1|0:100:47
+10     20219229        rs1467658       T       C       .       PASS    AA=C;DP=118     GT:GQ:DP        1|1:78:39       0|1:63:18       1|0:100:61
+1      153571205       rs6677385       C       A       .       PASS    AA=C;DP=140     GT:GQ:DP        1|1:78:43       0|1:58:20       1|0:16:77
+13     66003341        rs9571591       G       T       .       PASS    AA=T;DP=84      GT:GQ:DP        1|1:79:25       1|1:12:11       1|1:100:34
+17     69495686        rs8064315       C       T       .       PASS    AA=C;DP=114     GT:GQ:DP        1|1:79:26       1|1:12:15       1|1:100:72
+12     82217365        rs10862625      A       C       .       PASS    AA=C;DP=101     GT:GQ:DP        1|1:79:26       1|1:15:17       1|1:100:57
+3      87626909        .       G       A       .       PASS    AA=G;DP=111     GT:GQ:DP        1|1:79:28       0|0:24:19       1|0:100:63
+8      25023437        rs7828106       G       A       .       PASS    AA=G;DP=92      GT:GQ:DP        1|1:79:28       0|0:27:11       1|0:100:45
+10     20031847        rs12256382      C       A       .       PASS    AA=T;DP=117     GT:GQ:DP        1|1:79:28       0|0:32:21       1|0:100:67
+8      25489998        rs9314305       A       G       .       PASS    AA=G;DP=127     GT:GQ:DP        1|1:79:28       0|0:33:22       1|0:100:79
+18     488773  rs55959802      C       T       .       PASS    AA=T;DP=83      GT:GQ:DP        1|1:79:28       0|0:36:12       1|0:100:31
+6      167133480       .       T       C       .       PASS    AA=T;DP=91      GT:GQ:DP        1|1:79:28       0|0:36:13       1|0:100:40
+7      56285179        rs10232581      C       T       .       PASS    AA=c;DP=118     GT:GQ:DP        1|1:79:28       0|0:37:23       1|0:100:68
+6      20007764        rs10946346      C       T       .       PASS    AA=C;DP=105     GT:GQ:DP        1|1:79:28       0|0:41:19       1|0:100:60
+8      35314632        rs28395502      C       T       .       PASS    AA=C;DP=103     GT:GQ:DP        1|1:79:28       0|0:41:25       1|0:100:51
+12     76891353        rs11107622      G       A       .       PASS    AA=A;DP=100     GT:GQ:DP        1|1:79:28       0|0:42:14       1|0:100:58
+7      7772640 rs6463717       T       A       .       PASS    AA=T;DP=110     GT:GQ:DP        1|1:79:28       0|0:42:14       1|0:100:66
+17     16876919        rs4641803       C       T       .       PASS    AA=T;DP=108     GT:GQ:DP        1|1:79:28       0|0:42:14       1|0:100:69
+14     103242560       rs861531        C       A       .       PASS    AA=A;DP=121     GT:GQ:DP        1|1:79:28       0|0:42:15       1|0:100:77
+10     25612494        rs12263407      A       G       .       PASS    AA=A;DP=102     GT:GQ:DP        1|1:79:28       0|0:45:15       1|0:100:59
+16     73809828        rs8056814       G       A       .       PASS    AA=.;DP=107     GT:GQ:DP        1|1:79:28       0|0:45:15       1|0:100:64
+2      76242843        rs35787624      A       G       .       PASS    AA=A;DP=135     GT:GQ:DP        1|1:79:28       0|0:47:27       1|0:100:80
+7      56577951        .       C       T       .       PASS    AA=c;DP=114     GT:GQ:DP        1|1:79:28       0|0:48:17       1|0:100:65
+11     70939786        rs7934055       T       G       .       PASS    AA=.;DP=139     GT:GQ:DP        1|1:79:28       0|0:49:32       1|0:100:39
+16     6137129 .       T       C       .       PASS    AA=C;DP=106     GT:GQ:DP        1|1:79:28       0|0:54:18       1|0:100:60
+19     23481935        rs1121085       G       A       .       PASS    AA=a;DP=92      GT:GQ:DP        1|1:79:28       0|0:57:19       1|0:100:47
+8      99126326        rs11777189      C       A       .       PASS    AA=C;DP=111     GT:GQ:DP        1|1:79:28       0|0:57:19       1|0:100:62
+6      67009197        rs1029399       G       C       .       PASS    AA=G;DP=108     GT:GQ:DP        1|1:79:28       0|0:57:20       1|0:100:59
+19     22327017        rs8108630       G       T       .       PASS    AA=G;DP=106     GT:GQ:DP        1|1:79:28       0|0:57:25       1|0:100:55
+6      9597938 rs7739844       C       T       .       PASS    AA=T;DP=117     GT:GQ:DP        1|1:79:28       0|0:60:20       1|0:100:74
+13     37337709        rs9532131       A       C       .       PASS    AA=A;DP=101     GT:GQ:DP        1|1:79:28       0|0:63:21       1|0:100:51
+13     46304846        rs7324017       C       T       .       PASS    AA=T;DP=113     GT:GQ:DP        1|1:79:28       0|0:63:22       1|0:100:62
+4      84125432        rs6831339       C       T       .       PASS    AA=C;DP=111     GT:GQ:DP        1|1:79:28       0|0:69:23       1|0:100:45
+6      156128813       rs17086630      C       G       .       PASS    AA=G;DP=121     GT:GQ:DP        1|1:79:28       0|0:69:23       1|0:100:66
+11     17846593        rs2525890       C       T       .       PASS    AA=C;DP=138     GT:GQ:DP        1|1:79:28       0|0:69:23       1|0:100:82
+7      152911936       rs10247334      T       C       .       PASS    AA=C;DP=136     GT:GQ:DP        1|1:79:28       0|0:69:25       1|0:100:86
+5      147930671       rs17720733      A       C       .       PASS    AA=A;DP=95      GT:GQ:DP        1|1:79:28       0|0:72:24       1|0:100:45
+3      79236850        rs58321769      T       C       .       PASS    AA=N;DP=110     GT:GQ:DP        1|1:79:28       0|0:75:25       1|0:100:59
+2      134093637       rs1622528       T       C       .       PASS    AA=C;DP=111     GT:GQ:DP        1|1:79:28       0|0:75:26       1|0:100:51
+6      27137269        rs6931748       C       A       .       PASS    AA=c;DP=132     GT:GQ:DP        1|1:79:28       0|0:75:26       1|0:100:77
+10     109295705       rs1661008       T       C       .       PASS    AA=t;DP=139     GT:GQ:DP        1|1:79:28       0|0:75:26       1|0:100:86
+1      55579449        rs12146081      C       A       .       PASS    AA=C;DP=139;HM2;HM3     GT:GQ:DP        1|1:79:28       0|0:75:26       1|0:100:87
+11     5002270 rs1598512       T       C       .       PASS    AA=C;DP=133     GT:GQ:DP        1|1:79:28       0|0:75:31       1|0:100:73
+2      69051238        rs61605552      T       A       .       PASS    AA=A;DP=129     GT:GQ:DP        1|1:79:28       0|0:78:27       1|0:100:76
+7      42605913        .       C       T       .       PASS    AA=C;DP=116     GT:GQ:DP        1|1:79:28       0|0:81:27       1|0:100:61
+8      97409737        rs7001236       T       A       .       PASS    AA=T;DP=138     GT:GQ:DP        1|1:79:28       0|0:84:28       1|0:100:83
+8      123319685       rs7838474       G       A       .       PASS    AA=G;DP=130     GT:GQ:DP        1|1:79:28       0|0:87:29       1|0:100:26
+14     74925551        rs7159908       A       C       .       PASS    AA=C;DP=121     GT:GQ:DP        1|1:79:28       0|0:87:30       1|0:100:63
+15     24894466        rs17562513      A       G       .       PASS    AA=G;DP=146     GT:GQ:DP        1|1:79:28       0|0:90:30       1|0:100:86
+17     15001107        rs9914552       T       C       .       PASS    AA=C;DP=140     GT:GQ:DP        1|1:79:28       0|0:90:31       1|0:100:79
+4      59701036        rs10025299      A       C       .       PASS    AA=A;DP=145     GT:GQ:DP        1|1:79:28       0|0:90:31       1|0:100:85
+4      17655597        rs1325107       A       G       .       PASS    AA=G;DP=109     GT:GQ:DP        1|1:79:28       1|0:100:20      1|1:100:62
+17     48588132        rs807124        A       G       .       PASS    AA=G;DP=111     GT:GQ:DP        1|1:79:29       0|0:30:10       1|0:100:71
+3      48665114        rs2302295       T       C       .       PASS    AA=C;DP=125     GT:GQ:DP        1|1:79:29       0|0:42:15       1|0:100:81
+6      62321244        rs1577644       T       C       .       PASS    AA=T;DP=106     GT:GQ:DP        1|1:79:29       0|0:45:15       1|0:100:61
+7      7062606 rs10278612      G       C       .       PASS    AA=-;DP=105     GT:GQ:DP        1|1:79:29       0|0:48:19       1|0:100:57
+14     48939779        rs7149539       T       C       .       PASS    AA=T;DP=120     GT:GQ:DP        1|1:79:29       0|0:53:29       1|0:100:59
+4      186841697       rs10022965      A       G       .       PASS    AA=A;DP=126     GT:GQ:DP        1|1:79:29       0|0:55:30       1|0:100:66
+11     25602443        rs1348353       G       A       .       PASS    AA=N;DP=106     GT:GQ:DP        1|1:79:29       0|0:57:19       1|0:100:57
+16     16890451        rs4238658       T       C       .       PASS    AA=T;DP=125     GT:GQ:DP        1|1:79:29       0|0:57:19       1|0:100:79
+3      18743897        rs6792126       A       G       .       PASS    AA=A;DP=117     GT:GQ:DP        1|1:79:29       0|0:57:20       1|0:100:68
+3      21893411        rs812393        T       C       .       PASS    AA=C;DP=110     GT:GQ:DP        1|1:79:29       0|0:63:21       1|0:100:58
+3      175832489       rs56207695      T       C       .       PASS    AA=T;DP=133     GT:GQ:DP        1|1:79:29       0|0:69:23       1|0:100:75
+6      8924912 rs6901512       A       G       .       PASS    AA=G;DP=139     GT:GQ:DP        1|1:79:29       0|0:70:32       1|0:100:82
+13     95870771        rs9516690       T       A       .       PASS    AA=T;DP=116     GT:GQ:DP        1|1:79:29       0|0:81:28       1|0:100:59
+15     99824348        rs1587108       G       A       .       PASS    AA=G;DP=135     GT:GQ:DP        1|1:79:29       0|0:84:28       1|0:100:78
+3      75412186        rs7653667       G       A       .       PASS    AA=a;DP=131     GT:GQ:DP        1|1:79:29       0|0:87:30       1|0:100:73
+8      24955394        rs10110549      A       G       .       PASS    AA=a;DP=132     GT:GQ:DP        1|1:79:29       0|1:100:23      1|0:100:79
+2      37180748        rs1127906       A       G       .       PASS    AA=A;DP=120     GT:GQ:DP        1|1:79:29       0|1:100:24      1|0:100:67
+8      63138097        rs1400499       G       C       .       PASS    AA=G;DP=133     GT:GQ:DP        1|1:79:30       0|0:39:13       1|0:100:89
+8      864097  rs1502994       C       T       .       PASS    AA=C;DP=121     GT:GQ:DP        1|1:79:30       0|0:51:18       1|0:100:70
+3      69446866        rs2314990       T       C       .       PASS    AA=T;DP=118     GT:GQ:DP        1|1:79:30       0|0:72:27       1|0:100:61
+1      150745766       .       C       G       .       PASS    AA=C;DP=124     GT:GQ:DP        1|1:79:30       0|0:90:30       1|0:100:67
+6      169044369       .       C       T       .       PASS    AA=c;DP=142     GT:GQ:DP        1|1:79:30       0|0:90:33       1|0:100:80
+20     60012544        rs2273990       G       T       .       PASS    AA=G;DP=116     GT:GQ:DP        1|1:79:31       0|0:42:14       1|0:100:55
+2      134444137       rs901225        G       A       .       PASS    AA=G;DP=104     GT:GQ:DP        1|1:79:31       0|0:57:19       1|0:100:56
+2      100809829       rs3849374       G       C       .       PASS    AA=C;DP=112     GT:GQ:DP        1|1:79:32       0|1:100:24      1|0:100:59
+9      135527022       rs2519121       A       G       .       PASS    AA=G;DP=106     GT:GQ:DP        1|1:79:32       1|1:44:13       1|1:100:60
+17     73120471        rs55916842      G       A       .       PASS    AA=G;DP=113     GT:GQ:DP        1|1:79:33       0|0:51:19       1|0:100:61
+4      1057032 rs9992322       G       A       .       PASS    AA=G;DP=136     GT:GQ:DP        1|1:79:33       0|1:100:28      1|0:100:77
+1      169935320       rs10798598      A       G       .       PASS    AA=G;DP=120     GT:GQ:DP        1|1:79:33       1|0:100:20      1|1:100:56
+8      24466502        rs1492416       T       C       .       PASS    AA=N;DP=139     GT:GQ:DP        1|1:79:34       1|0:100:24      1|1:100:65
+18     50196715        rs6508296       A       C       .       PASS    AA=C;DP=120     GT:GQ:DP        1|1:79:34       1|1:33:20       1|1:100:63
+1      105276941       rs6662225       T       C       .       PASS    AA=C;DP=116     GT:GQ:DP        1|1:79:34       1|1:53:16       1|1:100:54
+10     44323185        rs915085        A       G       .       PASS    AA=G;DP=141     GT:GQ:DP        1|1:79:34       1|1:68:21       1|1:100:88
+6      166639018       .       C       T       .       PASS    AA=T;DP=121     GT:GQ:DP        1|1:79:35       0|1:100:26      1|0:100:61
+3      148692655       rs12632762      A       C       .       PASS    AA=C;DP=128     GT:GQ:DP        1|1:79:35       0|1:100:30      1|0:100:61
+4      110816991       rs7699171       T       A       .       PASS    AA=A;DP=116     GT:GQ:DP        1|1:79:35       1|1:34:18       1|1:100:63
+7      140219954       rs56797136      C       T       .       PASS    AA=T;DP=117     GT:GQ:DP        1|1:79:35       1|1:74:23       1|1:100:48
+22     44530100        rs9626437       G       T       .       PASS    AA=G;DP=141     GT:GQ:DP        1|1:79:36       0|0:28:24       1|0:100:41
+4      13936446        rs4698729       T       C       .       PASS    AA=T;DP=147     GT:GQ:DP        1|1:79:36       0|1:100:26      1|0:100:45
+5      151219483       rs7729026       G       A       .       PASS    AA=G;DP=109     GT:GQ:DP        1|1:79:36       1|0:100:19      1|1:100:51
+9      124338666       rs2104751       C       T       .       PASS    AA=t;DP=127     GT:GQ:DP        1|1:79:36       1|1:92:30       1|1:100:64
+3      134765273       rs1382701       C       T       .       PASS    AA=T;DP=122     GT:GQ:DP        1|1:79:38       1|0:100:22      1|1:91:64
+3      6254106 rs1603867       T       G       .       PASS    AA=G;DP=137     GT:GQ:DP        1|1:79:38       1|0:100:42      1|1:100:62
+14     99813174        rs1951521       G       A       .       PASS    AA=A;DP=128     GT:GQ:DP        1|1:79:38       1|0:64:27       1|1:100:67
+6      1579600 rs2569859       A       C       .       PASS    AA=C;DP=155     GT:GQ:DP        1|1:79:41       1|1:71:29       1|1:100:83
+X      5517316 rs5916169       C       T       .       PASS    AA=.;DP=108     GT:GQ:DP        1|1:7:10        1|0:100:18      1|1:100:34
+X      116605457       .       C       T       .       PASS    AA=N;DP=104     GT:GQ:DP        1|1:7:12        0|0:81:27       1|0:100:42
+5      28963717        rs94374 C       T       .       PASS    AA=c;DP=49      GT:GQ:DP        1|1:7:12        0|1:17:6        1|0:86:28
+4      184943322       rs4861579       T       G       .       PASS    AA=G;DP=76      GT:GQ:DP        1|1:7:13        0|1:26:16       1|0:100:37
+X      72895512        .       T       A       .       PASS    AA=A;DP=76      GT:GQ:DP        1|1:7:14        0|0:39:13       1|0:100:35
+X      94011728        .       A       G       .       PASS    AA=.;DP=90      GT:GQ:DP        1|1:7:14        0|0:40:20       1|0:100:21
+X      120490707       .       A       G       .       PASS    AA=A;DP=80      GT:GQ:DP        1|1:7:14        0|0:45:19       1|0:100:44
+X      106436138       .       G       A       .       PASS    AA=g;DP=91      GT:GQ:DP        1|1:7:14        0|0:90:30       1|0:100:19
+6      68828020        rs1378453       T       A       .       PASS    AA=T;DP=72      GT:GQ:DP        1|1:7:19        0|1:13:15       1|0:6:31
+6      170326127       .       C       T       .       PASS    AA=-;DP=64      GT:GQ:DP        1|1:7:3 0|1:62:19       1|0:100:30
+7      86994237        .       G       A       .       PASS    AA=G;DP=91      GT:GQ:DP        1|1:7:34        0|0:51:18       1|0:100:29
+X      116244501       rs2526767       C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        1|1:7:7 0|1:100:31      1|0:100:34
+X      140302203       rs6634255       C       G       .       PASS    AA=a;DP=59      GT:GQ:DP        1|1:7:7 1|1:22:9        1|1:71:34
+3      108103083       rs1709926       G       A       .       PASS    AA=A;DP=130     GT:GQ:DP        1|1:80:25       1|1:100:33      1|1:100:73
+4      110428814       rs2214375       C       A       .       PASS    AA=A;DP=142     GT:GQ:DP        1|1:80:25       1|1:100:33      1|1:100:87
+20     50787624        rs241796        A       G       .       PASS    AA=G;DP=136     GT:GQ:DP        1|1:80:25       1|1:100:40      1|1:100:75
+2      221225176       rs1517453       A       C       .       PASS    AA=C;DP=90      GT:GQ:DP        1|1:80:25       1|1:17:12       1|1:100:57
+5      66536024        rs1705392       C       G       .       PASS    AA=A;DP=96      GT:GQ:DP        1|1:80:25       1|1:21:16       1|1:100:55
+12     130889042       rs7965611       C       G       .       PASS    AA=G;DP=79      GT:GQ:DP        1|1:80:25       1|1:21:9        1|1:100:41
+10     104379922       rs4917980       T       G       .       PASS    AA=G;DP=94      GT:GQ:DP        1|1:80:25       1|1:23:11       1|1:100:56
+11     34891228        rs2956116       A       C       .       PASS    AA=C;DP=120     GT:GQ:DP        1|1:80:25       1|1:25:17       1|1:100:76
+3      149178088       rs6440523       A       C       .       PASS    AA=C;DP=125     GT:GQ:DP        1|1:80:25       1|1:25:20       1|1:100:81
+19     16125771        rs106048        T       C       .       PASS    AA=t;DP=99      GT:GQ:DP        1|1:80:25       1|1:26:12       1|1:100:62
+6      96977640        rs2092096       T       C       .       PASS    AA=C;DP=99      GT:GQ:DP        1|1:80:25       1|1:26:13       1|1:100:62
+6      163578118       rs6455883       A       G       .       PASS    AA=A;DP=93      GT:GQ:DP        1|1:80:25       1|1:29:19       1|1:100:43
+12     65650659        rs2102248       A       G       .       PASS    AA=A;DP=87      GT:GQ:DP        1|1:80:25       1|1:30:14       1|1:100:47
+3      165198556       rs6780079       T       C       .       PASS    AA=T;DP=107     GT:GQ:DP        1|1:80:25       1|1:30:18       1|1:100:65
+19     55719858        rs1150925       A       G       .       PASS    AA=G;DP=81      GT:GQ:DP        1|1:80:25       1|1:32:11       1|1:100:35
+9      94877653        rs56000948      T       C       .       PASS    AA=t;DP=81      GT:GQ:DP        1|1:80:25       1|1:32:9        1|1:100:36
+4      160602499       rs4035044       T       C       .       PASS    AA=C;DP=114     GT:GQ:DP        1|1:80:25       1|1:33:19       1|1:100:71
+3      135361945       rs9843401       A       G       .       PASS    AA=G;DP=83      GT:GQ:DP        1|1:80:25       1|1:35:10       1|1:100:37
+17     76635409        rs4077128       G       A       .       PASS    AA=A;DP=86      GT:GQ:DP        1|1:80:25       1|1:35:13       1|1:100:45
+7      75719962        rs11973658      A       C       .       PASS    AA=C;DP=103     GT:GQ:DP        1|1:80:25       1|1:35:19       1|1:100:59
+3      88878688        rs6551367       C       A       .       PASS    AA=A;DP=106     GT:GQ:DP        1|1:80:25       1|1:35:20       1|1:100:64
+12     10448311        rs2246809       A       G       .       PASS    AA=N;DP=79      GT:GQ:DP        1|1:80:25       1|1:38:11       1|1:100:40
+3      144187196       rs251485        T       C       .       PASS    AA=C;DP=88      GT:GQ:DP        1|1:80:25       1|1:38:11       1|1:100:53
+12     5685464 rs1558503       A       G       .       PASS    AA=A;DP=93      GT:GQ:DP        1|1:80:25       1|1:38:17       1|1:100:49
+13     74983092        rs1323695       C       T       .       PASS    AA=T;DP=91      GT:GQ:DP        1|1:80:25       1|1:38:22       1|1:100:45
+3      25930885        rs9879649       G       A       .       PASS    AA=A;DP=115     GT:GQ:DP        1|1:80:25       1|1:38:22       1|1:100:53
+13     65854842        rs421365        A       C       .       PASS    AA=C;DP=92      GT:GQ:DP        1|1:80:25       1|1:39:15       1|1:100:53
+13     68076143        rs287325        C       A       .       PASS    AA=C;DP=72      GT:GQ:DP        1|1:80:25       1|1:39:17       1|1:100:22
+9      135446446       rs7023289       A       G       .       PASS    AA=G;DP=79      GT:GQ:DP        1|1:80:25       1|1:41:12       1|1:100:33
+9      9803694 rs1746807       G       A       .       PASS    AA=A;DP=79      GT:GQ:DP        1|1:80:25       1|1:41:12       1|1:100:42
+9      94991590        rs7041800       A       G       .       PASS    AA=G;DP=100     GT:GQ:DP        1|1:80:25       1|1:41:12       1|1:100:52
+18     22634038        .       A       G       .       PASS    AA=A;DP=92      GT:GQ:DP        1|1:80:25       1|1:41:12       1|1:100:55
+16     82875618        .       A       G       .       PASS    AA=A;DP=104     GT:GQ:DP        1|1:80:25       1|1:41:12       1|1:100:67
+9      71158645        rs7875734       C       T       .       PASS    AA=C;DP=86      GT:GQ:DP        1|1:80:25       1|1:41:13       1|1:100:47
+4      32678502        rs9968445       T       C       .       PASS    AA=T;DP=84      GT:GQ:DP        1|1:80:25       1|1:41:13       1|1:100:50
+3      111556224       rs9842995       A       G       .       PASS    AA=G;DP=93      GT:GQ:DP        1|1:80:25       1|1:41:13       1|1:100:53
+20     61136316        rs1060490       A       G       .       PASS    AA=G;DP=101     GT:GQ:DP        1|1:80:25       1|1:41:13       1|1:100:63
+19     9339628 rs7255853       A       G       .       PASS    AA=G;DP=95      GT:GQ:DP        1|1:80:25       1|1:41:17       1|1:100:53
+3      66503837        rs332378        T       C       .       PASS    AA=T;DP=115     GT:GQ:DP        1|1:80:25       1|1:41:17       1|1:100:73
+1      206474126       rs2590681       T       C       .       PASS    AA=C;DP=98;HM2;HM3      GT:GQ:DP        1|1:80:25       1|1:41:23       1|1:100:37
+3      59805657        rs615832        T       A       .       PASS    AA=A;DP=98      GT:GQ:DP        1|1:80:25       1|1:41:23       1|1:100:49
+1      47965792        rs4926601       C       T       .       PASS    AA=C;DP=137;HM2;HM3     GT:GQ:DP        1|1:80:25       1|1:42:22       1|1:100:89
+16     23655829        rs780164        T       C       .       PASS    AA=C;DP=113     GT:GQ:DP        1|1:80:25       1|1:42:25       1|1:100:64
+15     55971861        rs930473        T       G       .       PASS    AA=G;DP=122     GT:GQ:DP        1|1:80:25       1|1:43:20       1|1:100:78
+13     89690936        rs1999580       A       T       .       PASS    AA=T;DP=125     GT:GQ:DP        1|1:80:25       1|1:43:24       1|1:100:62
+18     71883244        rs1702495       T       C       .       PASS    AA=C;DP=83      GT:GQ:DP        1|1:80:25       1|1:44:13       1|1:100:22
+18     37434206        rs2315172       C       T       .       PASS    AA=T;DP=96      GT:GQ:DP        1|1:80:25       1|1:44:13       1|1:100:45
+21     28798920        rs2223100       T       G       .       PASS    AA=G;DP=123     GT:GQ:DP        1|1:80:25       1|1:44:27       1|1:100:70
+5      2869919 rs1122076       C       T       .       PASS    AA=T;DP=99      GT:GQ:DP        1|1:80:25       1|1:47:14       1|1:100:59
+10     50579364        rs1258328       T       C       .       PASS    AA=C;DP=100     GT:GQ:DP        1|1:80:25       1|1:47:14       1|1:100:60
+17     3082483 rs4346233       T       C       .       PASS    AA=-;DP=101     GT:GQ:DP        1|1:80:25       1|1:47:14       1|1:100:60
+1      53646705        rs1288586       T       C       .       PASS    AA=N;DP=106;HM2 GT:GQ:DP        1|1:80:25       1|1:47:14       1|1:100:66
+20     5264523 rs6038138       G       A       .       PASS    AA=A;DP=103     GT:GQ:DP        1|1:80:25       1|1:47:15       1|1:100:64
+16     9269659 rs7403840       G       A       .       PASS    AA=A;DP=141     GT:GQ:DP        1|1:80:25       1|1:49:28       1|1:100:92
+10     20128865        rs2150599       G       A       .       PASS    AA=A;DP=70      GT:GQ:DP        1|1:80:25       1|1:50:15       1|1:100:21
+12     26833932        rs10842792      A       C       .       PASS    AA=C;DP=91      GT:GQ:DP        1|1:80:25       1|1:50:15       1|1:100:50
+4      37096541        rs9998980       C       T       .       PASS    AA=C;DP=102     GT:GQ:DP        1|1:80:25       1|1:50:15       1|1:100:62
+9      134218203       rs520440        G       A       .       PASS    AA=A;DP=104     GT:GQ:DP        1|1:80:25       1|1:50:15       1|1:100:65
+9      108186803       rs1385141       G       A       .       PASS    AA=A;DP=130     GT:GQ:DP        1|1:80:25       1|1:50:15       1|1:100:84
+12     126709146       rs7307911       T       C       .       PASS    AA=t;DP=100     GT:GQ:DP        1|1:80:25       1|1:52:26       1|1:100:50
+6      152885257       rs2623934       A       G       .       PASS    AA=G;DP=126     GT:GQ:DP        1|1:80:25       1|1:52:27       1|1:100:74
+2      3059168 rs7419318       C       T       .       PASS    AA=t;DP=126     GT:GQ:DP        1|1:80:25       1|1:53:16       1|1:100:44
+1      105086792       rs10736037      C       T       .       PASS    AA=T;DP=87;HM2;HM3      GT:GQ:DP        1|1:80:25       1|1:53:16       1|1:100:47
+2      141424164       rs1980343       C       T       .       PASS    AA=T;DP=89      GT:GQ:DP        1|1:80:25       1|1:53:16       1|1:100:47
+1      85848657        rs2026774       T       C       .       PASS    AA=C;DP=87;HM2;HM3      GT:GQ:DP        1|1:80:25       1|1:53:16       1|1:100:48
+3      140069579       rs2348391       T       C       .       PASS    AA=C;DP=100     GT:GQ:DP        1|1:80:25       1|1:53:16       1|1:100:59
+1      18156963        rs1192578       G       C       .       PASS    AA=C;DP=104;HM2 GT:GQ:DP        1|1:80:25       1|1:53:16       1|1:100:66
+7      28299602        rs177505        A       C       .       PASS    AA=C;DP=118     GT:GQ:DP        1|1:80:25       1|1:53:16       1|1:100:79
+6      169976063       rs6909843       A       G       .       PASS    AA=.;DP=86      GT:GQ:DP        1|1:80:25       1|1:53:17       1|1:100:36
+6      133650665       rs375189        C       A       .       PASS    AA=A;DP=89      GT:GQ:DP        1|1:80:25       1|1:53:17       1|1:100:47
+4      42380642        rs2575451       G       A       .       PASS    AA=A;DP=99      GT:GQ:DP        1|1:80:25       1|1:53:17       1|1:100:58
+4      88140265        rs6531944       T       C       .       PASS    AA=C;DP=106     GT:GQ:DP        1|1:80:25       1|1:53:17       1|1:100:65
+1      171576204       rs6680684       A       G       .       PASS    AA=G;DP=115;HM2 GT:GQ:DP        1|1:80:25       1|1:53:17       1|1:100:74
+12     92017480        rs7315424       G       A       .       PASS    AA=A;DP=107     GT:GQ:DP        1|1:80:25       1|1:54:22       1|1:100:59
+16     53443799        rs7190155       C       T       .       PASS    AA=T;DP=120     GT:GQ:DP        1|1:80:25       1|1:54:23       1|1:100:72
+6      73595405        rs9446764       C       G       .       PASS    AA=G;DP=106     GT:GQ:DP        1|1:80:25       1|1:54:29       1|1:100:44
+11     31302150        rs10835763      G       A       .       PASS    AA=A;DP=73      GT:GQ:DP        1|1:80:25       1|1:56:17       1|1:100:21
+16     48956848        rs1825688       C       A       .       PASS    AA=A;DP=91      GT:GQ:DP        1|1:80:25       1|1:56:17       1|1:100:35
+6      26144455        rs1540275       T       C       .       PASS    AA=t;DP=94      GT:GQ:DP        1|1:80:25       1|1:56:17       1|1:100:39
+1      69743009        rs1539185       C       A       .       PASS    AA=A;DP=92      GT:GQ:DP        1|1:80:25       1|1:56:17       1|1:100:45
+7      13374510        rs10246750      C       T       .       PASS    AA=T;DP=94      GT:GQ:DP        1|1:80:25       1|1:56:17       1|1:100:54
+1      21282818        rs4654899       C       A       .       PASS    AA=A;DP=106;HM2;HM3     GT:GQ:DP        1|1:80:25       1|1:56:17       1|1:100:58
+11     77513661        rs672159        C       T       .       PASS    AA=T;DP=100     GT:GQ:DP        1|1:80:25       1|1:56:17       1|1:100:60
+14     87649032        rs2755075       A       G       .       PASS    AA=a;DP=112     GT:GQ:DP        1|1:80:25       1|1:56:18       1|1:100:71
+7      87772443        rs10249055      T       C       .       PASS    AA=C;DP=127     GT:GQ:DP        1|1:80:25       1|1:56:18       1|1:100:85
+10     14505671        rs657387        G       C       .       PASS    AA=C;DP=84      GT:GQ:DP        1|1:80:25       1|1:56:19       1|1:100:40
+19     22982546        rs1729043       A       G       .       PASS    AA=.;DP=101     GT:GQ:DP        1|1:80:25       1|1:56:19       1|1:100:59
+2      75365656        rs4852366       T       C       .       PASS    AA=C;DP=133     GT:GQ:DP        1|1:80:25       1|1:56:20       1|1:100:89
+1      7070682 rs2032537       A       G       .       PASS    AA=G;DP=92;HM2  GT:GQ:DP        1|1:80:25       1|1:59:18       1|1:100:41
+3      182895613       rs7643765       T       C       .       PASS    AA=T;DP=98      GT:GQ:DP        1|1:80:25       1|1:59:18       1|1:100:43
+13     22605698        rs1336849       G       A       .       PASS    AA=A;DP=87      GT:GQ:DP        1|1:80:25       1|1:59:18       1|1:100:45
+8      110509800       rs6469261       T       A       .       PASS    AA=A;DP=94      GT:GQ:DP        1|1:80:25       1|1:59:18       1|1:100:52
+2      41552485        rs1911703       A       G       .       PASS    AA=G;DP=102     GT:GQ:DP        1|1:80:25       1|1:59:18       1|1:100:59
+5      16979191        rs2650457       C       G       .       PASS    AA=C;DP=109     GT:GQ:DP        1|1:80:25       1|1:59:18       1|1:100:69
+8      84941606        rs4382473       T       G       .       PASS    AA=T;DP=114     GT:GQ:DP        1|1:80:25       1|1:59:18       1|1:100:70
+4      175934322       rs6825619       G       A       .       PASS    AA=G;DP=116     GT:GQ:DP        1|1:80:25       1|1:59:18       1|1:100:73
+17     7297104 rs7406815       A       G       .       PASS    AA=N;DP=121     GT:GQ:DP        1|1:80:25       1|1:59:18       1|1:100:80
+10     70694113        rs6480393       T       C       .       PASS    AA=C;DP=93      GT:GQ:DP        1|1:80:25       1|1:59:19       1|1:100:49
+4      35993946        rs10003169      G       A       .       PASS    AA=A;DP=119     GT:GQ:DP        1|1:80:25       1|1:59:19       1|1:100:72
+1      35887531        rs536216        T       A       .       PASS    AA=A;DP=111     GT:GQ:DP        1|1:80:25       1|1:59:20       1|1:100:68
+13     44354038        rs7320734       A       G       .       PASS    AA=G;DP=101     GT:GQ:DP        1|1:80:25       1|1:59:21       1|1:100:53
+3      168834112       rs9845725       T       C       .       PASS    AA=C;DP=106     GT:GQ:DP        1|1:80:25       1|1:59:21       1|1:100:59
+2      40466842        rs4452199       A       T       .       PASS    AA=A;DP=79      GT:GQ:DP        1|1:80:25       1|1:62:19       1|1:100:30
+16     88412003        rs8047581       C       T       .       PASS    AA=t;DP=120     GT:GQ:DP        1|1:80:25       1|1:62:19       1|1:100:34
+9      72605328        rs1328154       G       A       .       PASS    AA=A;DP=102     GT:GQ:DP        1|1:80:25       1|1:62:19       1|1:100:47
+1      52845042        rs1970951       T       C       .       PASS    AA=C;DP=94      GT:GQ:DP        1|1:80:25       1|1:62:19       1|1:100:49
+8      86446728        rs924144        T       C       .       PASS    AA=N;DP=94      GT:GQ:DP        1|1:80:25       1|1:62:19       1|1:100:52
+12     13943796        rs7305583       C       T       .       PASS    AA=T;DP=102     GT:GQ:DP        1|1:80:25       1|1:62:19       1|1:100:59
+16     64317974        rs486183        G       A       .       PASS    AA=A;DP=105     GT:GQ:DP        1|1:80:25       1|1:62:19       1|1:100:60
+4      20746664        rs10025289      G       A       .       PASS    AA=G;DP=108     GT:GQ:DP        1|1:80:25       1|1:62:20       1|1:100:37
+4      119108811       rs10019359      G       A       .       PASS    AA=A;DP=88      GT:GQ:DP        1|1:80:25       1|1:62:20       1|1:100:38
+6      131297742       rs7748468       C       T       .       PASS    AA=T;DP=89      GT:GQ:DP        1|1:80:25       1|1:62:20       1|1:100:44
+9      102789275       rs2486370       T       G       .       PASS    AA=G;DP=117     GT:GQ:DP        1|1:80:25       1|1:62:21       1|1:100:72
+20     17795735        rs2745865       T       C       .       PASS    AA=t;DP=123     GT:GQ:DP        1|1:80:25       1|1:62:21       1|1:100:78
+2      44716117        rs10168462      A       G       .       PASS    AA=G;DP=94      GT:GQ:DP        1|1:80:25       1|1:65:20       1|1:100:38
+4      125627981       rs1565663       T       C       .       PASS    AA=C;DP=100     GT:GQ:DP        1|1:80:25       1|1:65:20       1|1:100:55
+12     128471358       rs7135723       T       C       .       PASS    AA=C;DP=102     GT:GQ:DP        1|1:80:25       1|1:65:20       1|1:100:58
+10     122949682       rs7082420       G       A       .       PASS    AA=A;DP=106     GT:GQ:DP        1|1:80:25       1|1:65:20       1|1:100:60
+8      105031020       rs2023029       T       A       .       PASS    AA=A;DP=104     GT:GQ:DP        1|1:80:25       1|1:65:20       1|1:100:61
+14     97228523        rs1300045       A       C       .       PASS    AA=C;DP=121     GT:GQ:DP        1|1:80:25       1|1:65:20       1|1:100:78
+5      61105785        rs2950223       G       A       .       PASS    AA=A;DP=130     GT:GQ:DP        1|1:80:25       1|1:65:20       1|1:100:79
+1      201785817       rs6695980       T       C       .       PASS    AA=C;DP=122     GT:GQ:DP        1|1:80:25       1|1:65:21       1|1:100:39
+15     82226535        rs11856314      C       T       .       PASS    AA=T;DP=107     GT:GQ:DP        1|1:80:25       1|1:65:21       1|1:100:62
+13     96136028        rs491059        C       T       .       PASS    AA=C;DP=119     GT:GQ:DP        1|1:80:25       1|1:65:21       1|1:100:75
+11     102596095       rs637923        G       A       .       PASS    AA=A;DP=86      GT:GQ:DP        1|1:80:25       1|1:65:22       1|1:100:31
+7      120906298       rs7791809       T       C       .       PASS    AA=C;DP=108     GT:GQ:DP        1|1:80:25       1|1:65:22       1|1:100:62
+8      132419747       rs7460903       T       G       .       PASS    AA=G;DP=115     GT:GQ:DP        1|1:80:25       1|1:65:28       1|1:100:62
+4      70408282        rs1594587       T       A       .       PASS    AA=t;DP=110     GT:GQ:DP        1|1:80:25       1|1:67:27       1|1:100:60
+4      72991597        rs1464343       A       G       .       PASS    AA=.;DP=134     GT:GQ:DP        1|1:80:25       1|1:67:29       1|1:100:82
+11     96675420        rs10219397      A       T       .       PASS    AA=T;DP=85      GT:GQ:DP        1|1:80:25       1|1:68:21       1|1:100:30
+8      121949885       rs4507806       T       C       .       PASS    AA=C;DP=95      GT:GQ:DP        1|1:80:25       1|1:68:21       1|1:100:37
+7      22174115        rs7808688       G       C       .       PASS    AA=C;DP=127     GT:GQ:DP        1|1:80:25       1|1:68:21       1|1:100:39
+3      69265664        rs1995663       G       A       .       PASS    AA=A;DP=88      GT:GQ:DP        1|1:80:25       1|1:68:21       1|1:100:42
+13     104537771       rs4277217       C       G       .       PASS    AA=G;DP=97      GT:GQ:DP        1|1:80:25       1|1:68:21       1|1:100:52
+4      147543761       rs2679139       C       T       .       PASS    AA=T;DP=108     GT:GQ:DP        1|1:80:25       1|1:68:21       1|1:100:57
+4      126524381       rs12711125      C       A       .       PASS    AA=A;DP=103     GT:GQ:DP        1|1:80:25       1|1:68:21       1|1:100:58
+13     74841780        rs7983928       C       T       .       PASS    AA=T;DP=108     GT:GQ:DP        1|1:80:25       1|1:68:21       1|1:100:61
+5      5256760 rs4549491       A       T       .       PASS    AA=A;DP=112     GT:GQ:DP        1|1:80:25       1|1:68:21       1|1:100:67
+1      81290620        rs1195762       T       C       .       PASS    AA=C;DP=111     GT:GQ:DP        1|1:80:25       1|1:68:21       1|1:100:68
+16     22900930        rs6497616       T       C       .       PASS    AA=C;DP=109     GT:GQ:DP        1|1:80:25       1|1:68:22       1|1:100:63
+5      115025114       rs712556        T       G       .       PASS    AA=G;DP=112     GT:GQ:DP        1|1:80:25       1|1:68:22       1|1:100:66
+12     3355574 rs4766112       T       C       .       PASS    AA=N;DP=101     GT:GQ:DP        1|1:80:25       1|1:71:22       1|1:100:52
+4      37036207        rs1552022       G       A       .       PASS    AA=G;DP=108     GT:GQ:DP        1|1:80:25       1|1:71:22       1|1:100:60
+1      239623388       rs3014567       A       G       .       PASS    AA=G;DP=112     GT:GQ:DP        1|1:80:25       1|1:71:22       1|1:100:61
+7      46666059        rs6979194       T       C       .       PASS    AA=C;DP=118     GT:GQ:DP        1|1:80:25       1|1:71:22       1|1:100:69
+10     91822046        rs4933541       C       T       .       PASS    AA=T;DP=123     GT:GQ:DP        1|1:80:25       1|1:71:22       1|1:100:78
+4      182171852       rs4484342       T       C       .       PASS    AA=t;DP=108     GT:GQ:DP        1|1:80:25       1|1:71:23       1|1:100:61
+2      184845320       rs13025515      A       T       .       PASS    AA=A;DP=103     GT:GQ:DP        1|1:80:25       1|1:73:29       1|1:100:51
+5      75966603        rs2431360       A       T       .       PASS    AA=T;DP=77      GT:GQ:DP        1|1:80:25       1|1:74:23       1|1:100:26
+10     60044972        rs1866167       C       T       .       PASS    AA=T;DP=97      GT:GQ:DP        1|1:80:25       1|1:74:23       1|1:100:36
+3      73263329        rs1486288       C       T       .       PASS    AA=T;DP=103     GT:GQ:DP        1|1:80:25       1|1:74:23       1|1:100:51
+12     69505955        rs2470371       G       A       .       PASS    AA=A;DP=109     GT:GQ:DP        1|1:80:25       1|1:74:23       1|1:100:61
+9      22809576        rs7849973       G       C       .       PASS    AA=C;DP=103     GT:GQ:DP        1|1:80:25       1|1:74:24       1|1:100:56
+10     44278008        rs928567        C       T       .       PASS    AA=T;DP=120     GT:GQ:DP        1|1:80:25       1|1:74:24       1|1:100:70
+1      4541602 rs241225        G       A       .       PASS    AA=A;DP=124;HM2;HM3     GT:GQ:DP        1|1:80:25       1|1:74:24       1|1:100:73
+7      49536460        rs2365067       T       C       .       PASS    AA=T;DP=118     GT:GQ:DP        1|1:80:25       1|1:74:25       1|1:100:69
+8      129277842       rs1861842       T       G       .       PASS    AA=G;DP=98      GT:GQ:DP        1|1:80:25       1|1:77:24       1|1:100:45
+3      147375401       rs1355685       A       G       .       PASS    AA=C;DP=104     GT:GQ:DP        1|1:80:25       1|1:77:24       1|1:100:54
+1      94432914        rs1330860       T       A       .       PASS    AA=A;DP=128;HM2;HM3     GT:GQ:DP        1|1:80:25       1|1:77:24       1|1:100:77
+3      138605430       rs13092287      G       A       .       PASS    AA=A;DP=102     GT:GQ:DP        1|1:80:25       1|1:77:25       1|1:100:44
+5      100793046       rs412683        T       C       .       PASS    AA=T;DP=108     GT:GQ:DP        1|1:80:25       1|1:77:25       1|1:100:59
+13     26201398        rs4771017       T       C       .       PASS    AA=C;DP=129     GT:GQ:DP        1|1:80:25       1|1:78:28       1|1:100:76
+6      118738627       rs283040        A       G       .       PASS    AA=A;DP=105     GT:GQ:DP        1|1:80:25       1|1:80:25       1|1:100:57
+1      53228131        rs12063529      A       G       .       PASS    AA=A;DP=122;HM2 GT:GQ:DP        1|1:80:25       1|1:80:25       1|1:100:69
+5      9179562 rs6876444       C       T       .       PASS    AA=T;DP=122     GT:GQ:DP        1|1:80:25       1|1:80:25       1|1:100:73
+14     65928459        rs8020115       C       T       .       PASS    AA=T;DP=131     GT:GQ:DP        1|1:80:25       1|1:80:25       1|1:100:81
+6      116191082       rs3897507       G       A       .       PASS    AA=G;DP=140     GT:GQ:DP        1|1:80:25       1|1:83:26       1|1:100:47
+21     21377191        rs2032297       C       G       .       PASS    AA=C;DP=136     GT:GQ:DP        1|1:80:25       1|1:83:26       1|1:100:81
+5      82994377        rs336949        A       G       .       PASS    AA=G;DP=133     GT:GQ:DP        1|1:80:25       1|1:83:28       1|1:100:79
+21     18851973        rs2205485       T       G       .       PASS    AA=G;DP=114     GT:GQ:DP        1|1:80:25       1|1:86:27       1|1:100:50
+4      182119108       rs1818803       T       C       .       PASS    AA=C;DP=111     GT:GQ:DP        1|1:80:25       1|1:86:28       1|1:100:57
+18     69425625        rs9945204       C       T       .       PASS    AA=C;DP=111     GT:GQ:DP        1|1:80:25       1|1:86:28       1|1:100:58
+7      47535961        rs10265512      G       A       .       PASS    AA=A;DP=107     GT:GQ:DP        1|1:80:25       1|1:89:28       1|1:100:53
+5      90347514        rs4916839       C       T       .       PASS    AA=T;DP=111     GT:GQ:DP        1|1:80:25       1|1:89:28       1|1:100:56
+2      17657953        rs1863560       T       G       .       PASS    AA=G;DP=117     GT:GQ:DP        1|1:80:25       1|1:89:28       1|1:100:66
+2      200581187       rs6414157       C       T       .       PASS    AA=C;DP=127     GT:GQ:DP        1|1:80:25       1|1:89:28       1|1:100:77
+10     20579990        rs1475667       G       A       .       PASS    AA=A;DP=112     GT:GQ:DP        1|1:80:25       1|1:89:29       1|1:100:57
+14     102170135       rs1190342       C       T       .       PASS    AA=T;DP=116     GT:GQ:DP        1|1:80:25       1|1:92:29       1|1:100:66
+3      113982051       rs7617911       C       T       .       PASS    AA=T;DP=128     GT:GQ:DP        1|1:80:25       1|1:92:29       1|1:100:76
+2      133997501       rs1017365       C       T       .       PASS    AA=T;DP=114     GT:GQ:DP        1|1:80:25       1|1:92:30       1|1:100:61
+2      191041778       rs5004460       A       G       .       PASS    AA=G;DP=124     GT:GQ:DP        1|1:80:25       1|1:92:30       1|1:100:69
+8      125255458       rs7837991       T       C       .       PASS    AA=T;DP=135     GT:GQ:DP        1|1:80:25       1|1:92:30       1|1:100:81
+3      126055340       rs1265649       A       G       .       PASS    AA=G;DP=144     GT:GQ:DP        1|1:80:25       1|1:92:32       1|1:100:84
+22     33088702        rs130904        C       A       .       PASS    AA=A;DP=116     GT:GQ:DP        1|1:80:25       1|1:95:31       1|1:100:59
+13     52711934        rs5008125       G       A       .       PASS    AA=A;DP=113     GT:GQ:DP        1|1:80:25       1|1:98:32       1|1:100:59
+3      115614364       rs2733399       C       T       .       PASS    AA=T;DP=134     GT:GQ:DP        1|1:80:26       1|1:100:38      1|1:100:70
+19     55572553        rs2695121       T       C       .       PASS    AA=C;DP=116     GT:GQ:DP        1|1:80:26       1|1:21:16       1|1:100:38
+15     55443996        rs1706401       T       G       .       PASS    AA=G;DP=73      GT:GQ:DP        1|1:80:26       1|1:23:7        1|1:100:39
+3      16659014        rs9854087       T       A       .       PASS    AA=A;DP=80      GT:GQ:DP        1|1:80:26       1|1:25:12       1|1:62:33
+22     20618309        rs94194 T       C       .       PASS    AA=C;DP=103     GT:GQ:DP        1|1:80:26       1|1:26:7        1|1:100:69
+4      21227311        rs6847761       A       G       .       PASS    AA=G;DP=105     GT:GQ:DP        1|1:80:26       1|1:27:18       1|1:100:62
+16     75242793        rs7205389       C       T       .       PASS    AA=T;DP=97      GT:GQ:DP        1|1:80:26       1|1:30:19       1|1:100:52
+10     96338324        rs7922831       C       T       .       PASS    AA=T;DP=79      GT:GQ:DP        1|1:80:26       1|1:31:14       1|1:100:39
+10     72504919        rs10740363      C       G       .       PASS    AA=G;DP=126     GT:GQ:DP        1|1:80:26       1|1:35:21       1|1:100:79
+2      21296617        rs430872        C       T       .       PASS    AA=T;DP=100     GT:GQ:DP        1|1:80:26       1|1:37:21       1|1:100:53
+19     4932097 rs197161        C       G       .       PASS    AA=G;DP=86      GT:GQ:DP        1|1:80:26       1|1:38:11       1|1:100:40
+7      4163723 rs604400        C       T       .       PASS    AA=T;DP=98      GT:GQ:DP        1|1:80:26       1|1:38:12       1|1:100:61
+10     128726204       rs7085407       G       C       .       PASS    AA=C;DP=114     GT:GQ:DP        1|1:80:26       1|1:38:26       1|1:100:63
+1      57530280        rs662134        A       G       .       PASS    AA=G;DP=85;HM2  GT:GQ:DP        1|1:80:26       1|1:41:12       1|1:100:47
+20     23038092        rs844839        C       T       .       PASS    AA=c;DP=102     GT:GQ:DP        1|1:80:26       1|1:41:12       1|1:100:64
+2      170360303       rs10930381      A       G       .       PASS    AA=N;DP=81      GT:GQ:DP        1|1:80:26       1|1:44:13       1|1:100:36
+4      188831968       rs7665060       C       T       .       PASS    AA=C;DP=99      GT:GQ:DP        1|1:80:26       1|1:44:15       1|1:100:58
+4      80769452        rs11098788      A       G       .       PASS    AA=G;DP=108     GT:GQ:DP        1|1:80:26       1|1:47:15       1|1:100:71
+1      91349595        rs165020        C       G       .       PASS    AA=G;DP=86      GT:GQ:DP        1|1:80:26       1|1:49:21       1|1:100:29
+2      192344408       rs10173668      T       G       .       PASS    AA=G;DP=125     GT:GQ:DP        1|1:80:26       1|1:49:23       1|1:100:78
+2      17134063        rs906492        A       G       .       PASS    AA=G;DP=98      GT:GQ:DP        1|1:80:26       1|1:50:15       1|1:100:58
+11     63666692        rs7938819       G       A       .       PASS    AA=G;DP=105     GT:GQ:DP        1|1:80:26       1|1:50:15       1|1:100:65
+12     21520079        rs10160843      G       A       .       PASS    AA=A;DP=115     GT:GQ:DP        1|1:80:26       1|1:52:22       1|1:100:66
+6      89445525        .       A       G       .       PASS    AA=A;DP=126     GT:GQ:DP        1|1:80:26       1|1:53:16       1|1:100:82
+5      19047258        rs4593270       A       G       .       PASS    AA=G;DP=89      GT:GQ:DP        1|1:80:26       1|1:53:17       1|1:100:47
+17     27058802        rs1670694       T       C       .       PASS    AA=t;DP=103     GT:GQ:DP        1|1:80:26       1|1:53:17       1|1:100:62
+20     19785358        rs6081773       A       G       .       PASS    AA=G;DP=111     GT:GQ:DP        1|1:80:26       1|1:56:18       1|1:100:67
+9      12976823        rs1332073       A       G       .       PASS    AA=.;DP=119     GT:GQ:DP        1|1:80:26       1|1:56:18       1|1:100:75
+11     125966968       rs605344        C       T       .       PASS    AA=T;DP=128     GT:GQ:DP        1|1:80:26       1|1:56:18       1|1:100:83
+5      3505314 rs32725 A       C       .       PASS    AA=C;DP=119     GT:GQ:DP        1|1:80:26       1|1:58:29       1|1:100:66
+17     71625980        rs12940619      C       T       .       PASS    AA=t;DP=97      GT:GQ:DP        1|1:80:26       1|1:59:18       1|1:100:54
+13     101478802       rs9557788       C       T       .       PASS    AA=T;DP=105     GT:GQ:DP        1|1:80:26       1|1:59:19       1|1:100:46
+2      220273083       rs682699        C       T       .       PASS    AA=T;DP=126     GT:GQ:DP        1|1:80:26       1|1:59:24       1|1:100:74
+4      105819978       rs482568        T       C       .       PASS    AA=C;DP=103     GT:GQ:DP        1|1:80:26       1|1:62:19       1|1:100:58
+3      45427582        rs854208        A       G       .       PASS    AA=G;DP=128     GT:GQ:DP        1|1:80:26       1|1:62:19       1|1:100:81
+3      191985230       rs6802082       A       G       .       PASS    AA=G;DP=101     GT:GQ:DP        1|1:80:26       1|1:62:26       1|1:100:52
+4      75468229        rs4694190       T       G       .       PASS    AA=G;DP=117     GT:GQ:DP        1|1:80:26       1|1:63:31       1|1:100:58
+6      23456524        rs1925452       C       T       .       PASS    AA=T;DP=82      GT:GQ:DP        1|1:80:26       1|1:65:20       1|1:100:24
+5      81269953        rs4703858       A       G       .       PASS    AA=G;DP=115     GT:GQ:DP        1|1:80:26       1|1:65:21       1|1:100:70
+1      115524196       rs1750395       A       G       .       PASS    AA=G;DP=146;HM2 GT:GQ:DP        1|1:80:26       1|1:65:21       1|1:100:98
+12     13335984        rs2417257       T       C       .       PASS    AA=C;DP=137     GT:GQ:DP        1|1:80:26       1|1:67:28       1|1:100:82
+2      160647301       rs4233679       C       T       .       PASS    AA=T;DP=80      GT:GQ:DP        1|1:80:26       1|1:68:21       1|1:100:24
+12     61916764        rs1456038       G       A       .       PASS    AA=A;DP=88      GT:GQ:DP        1|1:80:26       1|1:68:21       1|1:100:44
+4      6579792 rs7655230       C       T       .       PASS    AA=T;DP=111     GT:GQ:DP        1|1:80:26       1|1:68:21       1|1:100:65
+16     25935310        rs4633724       T       C       .       PASS    AA=C;DP=115     GT:GQ:DP        1|1:80:26       1|1:68:22       1|1:100:65
+6      115938221       rs9320536       C       T       .       PASS    AA=T;DP=105     GT:GQ:DP        1|1:80:26       1|1:68:23       1|1:100:55
+12     36637690        rs8189565       T       A       .       PASS    AA=.;DP=111     GT:GQ:DP        1|1:80:26       1|1:74:23       1|1:100:62
+5      137083926       rs6887727       T       C       .       PASS    AA=t;DP=124     GT:GQ:DP        1|1:80:26       1|1:74:23       1|1:100:76
+6      8746521 rs9393064       T       C       .       PASS    AA=T;DP=117     GT:GQ:DP        1|1:80:26       1|1:74:24       1|1:100:66
+10     13334317        rs472806        A       G       .       PASS    AA=A;DP=120     GT:GQ:DP        1|1:80:26       1|1:74:24       1|1:100:71
+3      38944310        rs7634127       G       A       .       PASS    AA=A;DP=115     GT:GQ:DP        1|1:80:26       1|1:74:25       1|1:100:63
+8      53733082        rs12708142      C       A       .       PASS    AA=A;DP=129     GT:GQ:DP        1|1:80:26       1|1:75:35       1|1:100:67
+15     67596496        rs4777148       T       C       .       PASS    AA=C;DP=123     GT:GQ:DP        1|1:80:26       1|1:77:24       1|1:100:75
+21     35536466        rs8130688       C       G       .       PASS    AA=G;DP=134     GT:GQ:DP        1|1:80:26       1|1:77:24       1|1:100:84
+3      7008007 rs546457        T       C       .       PASS    AA=C;DP=99      GT:GQ:DP        1|1:80:26       1|1:80:25       1|1:100:37
+6      85022666        rs9341973       A       G       .       PASS    AA=T;DP=97      GT:GQ:DP        1|1:80:26       1|1:80:25       1|1:100:46
+3      79482265        rs6548616       T       C       .       PASS    AA=C;DP=105     GT:GQ:DP        1|1:80:26       1|1:80:27       1|1:100:54
+9      112739701       rs6477795       A       G       .       PASS    AA=G;DP=120     GT:GQ:DP        1|1:80:26       1|1:80:28       1|1:100:67
+5      9065855 rs2962655       T       C       .       PASS    AA=N;DP=98      GT:GQ:DP        1|1:80:26       1|1:83:26       1|1:100:47
+6      54035285        rs4715439       T       C       .       PASS    AA=C;DP=119     GT:GQ:DP        1|1:80:26       1|1:83:26       1|1:100:67
+4      169897266       rs7676725       A       G       .       PASS    AA=A;DP=116     GT:GQ:DP        1|1:80:26       1|1:83:28       1|1:100:61
+4      151070058       rs1505471       C       T       .       PASS    AA=T;DP=114     GT:GQ:DP        1|1:80:26       1|1:86:27       1|1:100:62
+3      113943752       rs820564        C       G       .       PASS    AA=C;DP=118     GT:GQ:DP        1|1:80:26       1|1:92:30       1|1:100:62
+5      34627230        rs7704404       C       T       .       PASS    AA=T;DP=119     GT:GQ:DP        1|1:80:26       1|1:95:30       1|1:100:66
+7      157425165       rs10226480      A       G       .       PASS    AA=a;DP=132     GT:GQ:DP        1|1:80:26       1|1:95:30       1|1:100:76
+1      231338266       rs2477857       A       T       .       PASS    AA=A;DP=138;HM2;HM3     GT:GQ:DP        1|1:80:26       1|1:95:30       1|1:100:82
+11     132584095       rs525999        A       G       .       PASS    AA=G;DP=141     GT:GQ:DP        1|1:80:26       1|1:98:32       1|1:100:70
+11     41400048        rs2939755       T       C       .       PASS    AA=C;DP=143     GT:GQ:DP        1|1:80:26       1|1:98:32       1|1:100:74
+1      187005980       rs10801647      T       C       .       PASS    AA=C;DP=130     GT:GQ:DP        1|1:80:26       1|1:98:33       1|1:100:71
+21     41265988        rs2837891       T       C       .       PASS    AA=C;DP=124     GT:GQ:DP        1|1:80:27       1|1:100:37      1|1:100:60
+19     3863903 rs7508194       A       C       .       PASS    AA=N;DP=75      GT:GQ:DP        1|1:80:27       1|1:29:10       1|1:100:39
+16     49016547        rs8182109       T       C       .       PASS    AA=C;DP=100     GT:GQ:DP        1|1:80:27       1|1:32:9        1|1:100:66
+3      58145972        rs9860887       A       C       .       PASS    AA=C;DP=100     GT:GQ:DP        1|1:80:27       1|1:38:11       1|1:100:66
+6      8171794 rs12173843      G       A       .       PASS    AA=A;DP=99      GT:GQ:DP        1|1:80:27       1|1:47:14       1|1:100:58
+7      7837798 rs9690248       C       T       .       PASS    AA=T;DP=97      GT:GQ:DP        1|1:80:27       1|1:47:15       1|1:100:57
+2      64981812        rs1396808       G       A       .       PASS    AA=A;DP=113     GT:GQ:DP        1|1:80:27       1|1:56:17       1|1:100:57
+1      216309241       rs1490340       G       A       .       PASS    AA=A;DP=128;HM2 GT:GQ:DP        1|1:80:27       1|1:62:20       1|1:100:81
+16     78317471        rs4888046       C       T       .       PASS    AA=N;DP=135     GT:GQ:DP        1|1:80:27       1|1:62:21       1|1:100:87
+2      139955335       rs12611979      G       A       .       PASS    AA=A;DP=113     GT:GQ:DP        1|1:80:27       1|1:65:23       1|1:100:63
+3      15385369        rs6766086       A       G       .       PASS    AA=G;DP=121     GT:GQ:DP        1|1:80:27       1|1:68:21       1|1:100:75
+9      112098178       rs10739293      A       G       .       PASS    AA=A;DP=135     GT:GQ:DP        1|1:80:27       1|1:68:22       1|1:100:86
+16     1839951 rs2492886       G       T       .       PASS    AA=N;DP=99      GT:GQ:DP        1|1:80:27       1|1:71:22       1|1:100:49
+4      22134042        rs2016836       T       A       .       PASS    AA=A;DP=108     GT:GQ:DP        1|1:80:27       1|1:71:23       1|1:100:59
+3      45881360        rs9856760       G       A       .       PASS    AA=A;DP=107     GT:GQ:DP        1|1:80:27       1|1:74:23       1|1:100:55
+3      106755061       rs632511        T       C       .       PASS    AA=t;DP=107     GT:GQ:DP        1|1:80:27       1|1:74:24       1|1:100:55
+4      183952304       rs6817534       G       C       .       PASS    AA=G;DP=111     GT:GQ:DP        1|1:80:27       1|1:74:24       1|1:100:58
+1      212705157       rs5020616       A       G       .       PASS    AA=G;DP=131;HM2 GT:GQ:DP        1|1:80:27       1|1:77:24       1|1:100:80
+2      131349686       rs6430388       A       G       .       PASS    AA=G;DP=140     GT:GQ:DP        1|1:80:27       1|1:77:24       1|1:100:91
+11     36923300        rs2422448       T       C       .       PASS    AA=C;DP=113     GT:GQ:DP        1|1:80:27       1|1:80:26       1|1:100:61
+3      108041425       rs1402302       G       C       .       PASS    AA=G;DP=131     GT:GQ:DP        1|1:80:27       1|1:95:33       1|1:100:70
+10     58495356        rs3098360       A       G       .       PASS    AA=G;DP=101     GT:GQ:DP        1|1:80:28       1|1:62:20       1|1:100:55
+10     45291192        rs1080264       G       A       .       PASS    AA=A;DP=121     GT:GQ:DP        1|1:80:29       0|0:5:14        1|0:100:77
+19     3713926 rs7245624       G       A       .       PASS    AA=G;DP=93      GT:GQ:DP        1|1:80:29       0|0:7:10        1|0:100:42
+2      15566692        rs4430912       T       C       .       PASS    AA=C;DP=118     GT:GQ:DP        1|1:80:29       1|1:42:19       1|1:100:71
+16     71189310        rs9935400       T       C       .       PASS    AA=C;DP=111     GT:GQ:DP        1|1:80:29       1|1:45:18       1|1:100:67
+3      169381484       rs2249391       A       G       .       PASS    AA=G;DP=117     GT:GQ:DP        1|1:80:31       1|1:74:24       1|1:100:65
+16     71343190        rs28847294      G       T       .       PASS    AA=G;DP=122     GT:GQ:DP        1|1:80:31       1|1:78:28       1|1:100:64
+4      44693313        rs7675796       A       G       .       PASS    AA=G;DP=139     GT:GQ:DP        1|1:80:32       1|1:86:28       1|1:100:77
+2      153496994       rs6719381       T       C       .       PASS    AA=T;DP=112     GT:GQ:DP        1|1:80:33       1|0:100:23      1|1:100:57
+3      23609638        rs4456808       G       T       .       PASS    AA=T;DP=111     GT:GQ:DP        1|1:80:33       1|1:38:26       1|1:100:53
+1      242128729       rs950399        T       C       .       PASS    AA=C;DP=132;HM3 GT:GQ:DP        1|1:80:33       1|1:52:27       1|1:100:73
+18     47532324        rs323108        G       A       .       PASS    AA=A;DP=110     GT:GQ:DP        1|1:80:33       1|1:64:25       1|1:100:48
+11     121077613       rs645409        G       C       .       PASS    AA=G;DP=99      GT:GQ:DP        1|1:80:33       1|1:80:26       1|1:100:31
+5      128026433       rs10045094      T       C       .       PASS    AA=T;DP=140     GT:GQ:DP        1|1:80:34       0|0:84:28       1|0:100:76
+8      72937196        rs12674658      G       A       .       PASS    AA=G;DP=153     GT:GQ:DP        1|1:80:34       0|1:100:31      1|0:100:87
+20     46759847        rs6019386       T       G       .       PASS    AA=G;DP=128     GT:GQ:DP        1|1:80:35       0|0:5:18        1|0:100:76
+4      8749694 rs7665898       G       A       .       PASS    AA=G;DP=106     GT:GQ:DP        1|1:80:35       1|0:100:21      1|1:100:35
+2      238903880       rs11886441      G       A       .       PASS    AA=G;DP=126     GT:GQ:DP        1|1:80:36       0|1:100:23      1|0:100:70
+19     53203324        rs10415290      T       C       .       PASS    AA=.;DP=159     GT:GQ:DP        1|1:80:37       0|0:93:31       1|0:100:95
+17     74802010        rs56046776      T       A       .       PASS    AA=T;DP=137     GT:GQ:DP        1|1:80:41       0|1:72:17       1|0:100:82
+1      198797687       rs6427834       G       A       .       PASS    AA=A;DP=129;HM2 GT:GQ:DP        1|1:80:41       1|1:52:26       1|1:100:61
+13     41533251        rs6561031       G       T       .       PASS    AA=G;DP=140     GT:GQ:DP        1|1:80:43       0|0:23:14       1|0:100:83
+2      205017456       rs11690070      T       A       .       PASS    AA=T;DP=106     GT:GQ:DP        1|1:81:27       1|0:100:11      1|1:100:64
+17     62709566        rs4791303       T       C       .       PASS    AA=C;DP=105     GT:GQ:DP        1|1:81:27       1|0:100:13      1|1:96:65
+6      105892435       rs60127716      A       T       .       PASS    AA=A;DP=101     GT:GQ:DP        1|1:81:27       1|0:100:17      1|1:61:57
+12     88430360        rs10777178      T       C       .       PASS    AA=T;DP=99      GT:GQ:DP        1|1:81:27       1|0:100:18      1|1:100:55
+3      17131629        rs9862301       A       G       .       PASS    AA=G;DP=102     GT:GQ:DP        1|1:81:27       1|0:100:19      1|1:100:56
+18     20470293        rs339855        G       A       .       PASS    AA=g;DP=88      GT:GQ:DP        1|1:81:27       1|0:100:19      1|1:84:45
+14     41310585        rs1073912       T       C       .       PASS    AA=T;DP=100     GT:GQ:DP        1|1:81:27       1|0:100:21      1|1:100:47
+18     11513990        rs59432389      T       A       .       PASS    AA=A;DP=116     GT:GQ:DP        1|1:81:27       1|0:100:21      1|1:100:64
+7      42090480        rs846293        G       A       .       PASS    AA=G;DP=135     GT:GQ:DP        1|1:81:27       1|0:100:21      1|1:100:87
+13     80388623        .       A       G       .       PASS    AA=A;DP=118     GT:GQ:DP        1|1:81:27       1|0:100:22      1|1:100:70
+3      179966255       rs7637320       A       T       .       PASS    AA=T;DP=123     GT:GQ:DP        1|1:81:27       1|0:100:22      1|1:100:72
+4      11450902        rs1492495       C       T       .       PASS    AA=T;DP=107     GT:GQ:DP        1|1:81:27       1|0:100:23      1|1:100:59
+6      22539600        rs7768473       T       C       .       PASS    AA=C;DP=111     GT:GQ:DP        1|1:81:27       1|0:100:23      1|1:100:61
+3      194555155       rs7633392       G       A       .       PASS    AA=G;DP=116     GT:GQ:DP        1|1:81:27       1|0:100:24      1|1:100:65
+1      169717513       rs10798429      G       A       .       PASS    AA=A;DP=103     GT:GQ:DP        1|1:81:27       1|0:100:25      1|1:100:50
+4      9647210 rs10012779      C       T       .       PASS    AA=c;DP=114     GT:GQ:DP        1|1:81:27       1|0:100:25      1|1:100:63
+10     95065189        rs787675        A       G       .       PASS    AA=a;DP=121     GT:GQ:DP        1|1:81:27       1|0:100:25      1|1:100:66
+3      103259969       rs771812        T       A       .       PASS    AA=A;DP=126     GT:GQ:DP        1|1:81:27       1|0:100:25      1|1:100:75
+1      203939105       rs1772140       A       G       .       PASS    AA=G;DP=114     GT:GQ:DP        1|1:81:27       1|0:100:26      1|1:100:62
+13     110326751       rs2094298       T       C       .       PASS    AA=t;DP=119     GT:GQ:DP        1|1:81:27       1|0:100:26      1|1:100:68
+5      145228969       rs421253        G       A       .       PASS    AA=A;DP=131     GT:GQ:DP        1|1:81:27       1|0:100:26      1|1:100:82
+9      112432833       rs6477780       T       C       .       PASS    AA=C;DP=117     GT:GQ:DP        1|1:81:27       1|0:100:28      1|1:100:62
+15     44055499        rs939396        T       G       .       PASS    AA=g;DP=119     GT:GQ:DP        1|1:81:27       1|0:100:37      1|1:100:55
+20     54284093        rs34340379      T       G       .       PASS    AA=T;DP=121     GT:GQ:DP        1|1:81:27       1|0:100:40      1|1:100:56
+17     35084561        rs1565922       A       G       .       PASS    AA=a;DP=121     GT:GQ:DP        1|1:81:27       1|0:25:14       1|1:100:80
+16     11418129        rs13338695      A       G       .       PASS    AA=a;DP=93      GT:GQ:DP        1|1:81:27       1|0:53:14       1|1:100:52
+2      237472428       rs11678932      T       C       .       PASS    AA=C;DP=102     GT:GQ:DP        1|1:81:27       1|0:61:17       1|1:100:58
+9      32130543        rs2661850       C       G       .       PASS    AA=G;DP=136     GT:GQ:DP        1|1:81:27       1|0:61:26       1|1:100:75
+7      52549994        rs10280700      G       A       .       PASS    AA=G;DP=96      GT:GQ:DP        1|1:81:27       1|0:64:22       1|1:100:47
+13     74578166        rs9530407       C       T       .       PASS    AA=T;DP=91      GT:GQ:DP        1|1:81:27       1|0:68:14       1|1:75:50
+6      151891720       rs4870033       T       C       .       PASS    AA=C;DP=85      GT:GQ:DP        1|1:81:27       1|0:72:23       1|1:60:21
+7      105501749       rs6973699       A       G       .       PASS    AA=A;DP=109     GT:GQ:DP        1|1:81:27       1|0:74:14       1|1:100:70
+2      221829989       rs6739940       T       A       .       PASS    AA=A;DP=117     GT:GQ:DP        1|1:81:27       1|0:75:24       1|1:100:63
+15     78739678        rs7162401       T       C       .       PASS    AA=C;DP=98      GT:GQ:DP        1|1:81:27       1|0:84:15       1|1:100:54
+6      120526463       rs10484970      G       A       .       PASS    AA=G;DP=125     GT:GQ:DP        1|1:81:27       1|0:84:18       1|1:100:80
+20     52553105        rs6091905       A       G       .       PASS    AA=G;DP=85      GT:GQ:DP        1|1:81:27       1|0:91:16       1|1:100:44
+11     94841870        rs2508421       G       T       .       PASS    AA=T;DP=110     GT:GQ:DP        1|1:81:27       1|0:93:23       1|1:100:59
+20     55921214        rs326822        A       G       .       PASS    AA=G;DP=124     GT:GQ:DP        1|1:81:27       1|0:96:28       1|1:100:70
+2      61238609        rs1729671       G       C       .       PASS    AA=C;DP=116     GT:GQ:DP        1|1:81:27       1|0:97:19       1|1:100:58
+9      22467134        rs507021        C       T       .       PASS    AA=T;DP=101     GT:GQ:DP        1|1:81:27       1|1:53:16       1|1:100:58
+20     9458263 rs2232268       T       A       .       PASS    AA=A;DP=127     GT:GQ:DP        1|1:81:27       1|1:71:24       1|1:100:75
+9      137305014       rs1778981       G       A       .       PASS    AA=G;DP=104     GT:GQ:DP        1|1:81:28       0|1:100:11      1|0:100:65
+2      100760579       rs6744160       C       A       .       PASS    AA=A;DP=92      GT:GQ:DP        1|1:81:28       0|1:100:15      1|0:100:49
+14     44297664        rs229717        C       G       .       PASS    AA=C;DP=92      GT:GQ:DP        1|1:81:28       0|1:100:19      1|0:100:45
+1      57839125        rs7556036       C       A       .       PASS    AA=C;DP=110     GT:GQ:DP        1|1:81:28       0|1:100:19      1|0:100:64
+16     17047583        rs11645858      C       A       .       PASS    AA=c;DP=115     GT:GQ:DP        1|1:81:28       0|1:100:20      1|0:100:65
+14     89340171        rs17094672      C       T       .       PASS    AA=T;DP=110     GT:GQ:DP        1|1:81:28       0|1:100:22      1|0:100:62
+13     23918863        rs9318554       G       A       .       PASS    AA=a;DP=117     GT:GQ:DP        1|1:81:28       0|1:100:22      1|0:100:67
+6      8460463 rs9406172       T       A       .       PASS    AA=A;DP=116     GT:GQ:DP        1|1:81:28       0|1:100:23      1|0:100:66
+1      76619306        rs11162136      C       T       .       PASS    AA=T;DP=119;HM2 GT:GQ:DP        1|1:81:28       0|1:100:23      1|0:100:68
+4      56292838        rs17086034      G       A       .       PASS    AA=G;DP=123     GT:GQ:DP        1|1:81:28       0|1:100:23      1|0:100:69
+19     6224140 rs4807858       A       G       .       PASS    AA=N;DP=120     GT:GQ:DP        1|1:81:28       0|1:100:23      1|0:100:70
+5      75873590        rs13355881      C       T       .       PASS    AA=T;DP=141     GT:GQ:DP        1|1:81:28       0|1:100:23      1|0:100:88
+3      156831648       rs9814374       C       T       .       PASS    AA=c;DP=113     GT:GQ:DP        1|1:81:28       0|1:100:24      1|0:100:58
+8      35468562        rs2053341       C       T       .       PASS    AA=T;DP=112     GT:GQ:DP        1|1:81:28       0|1:100:24      1|0:100:60
+5      129580715       rs6861345       A       G       .       PASS    AA=G;DP=126     GT:GQ:DP        1|1:81:28       0|1:100:26      1|0:100:32
+4      62723175        rs4860454       A       G       .       PASS    AA=N;DP=111     GT:GQ:DP        1|1:81:28       0|1:100:26      1|0:100:57
+5      111960876       rs6594633       A       G       .       PASS    AA=G;DP=141     GT:GQ:DP        1|1:81:28       0|1:100:26      1|0:100:85
+6      92376835        rs9359956       A       G       .       PASS    AA=A;DP=123     GT:GQ:DP        1|1:81:28       0|1:100:27      1|0:100:69
+10     2547076 rs2458688       A       G       .       PASS    AA=a;DP=127     GT:GQ:DP        1|1:81:28       0|1:100:27      1|0:100:72
+13     46794080        rs495783        T       C       .       PASS    AA=C;DP=143     GT:GQ:DP        1|1:81:28       0|1:100:30      1|0:100:73
+5      66772453        rs32034 T       G       .       PASS    AA=T;DP=125     GT:GQ:DP        1|1:81:28       0|1:100:31      1|0:100:62
+11     39483554        rs6485112       T       C       .       PASS    AA=T;DP=125     GT:GQ:DP        1|1:81:28       0|1:100:32      1|0:100:67
+6      53254362        rs2235723       A       G       .       PASS    AA=G;DP=143     GT:GQ:DP        1|1:81:28       0|1:100:33      1|0:100:81
+10     9617716 rs733431        T       C       .       PASS    AA=C;DP=137     GT:GQ:DP        1|1:81:28       0|1:100:36      1|0:100:70
+17     10522663        rs4791419       G       C       .       PASS    AA=G;DP=133     GT:GQ:DP        1|1:81:28       0|1:100:42      1|0:100:65
+3      131547038       rs4491952       G       A       .       PASS    AA=A;DP=99      GT:GQ:DP        1|1:81:28       0|1:18:16       1|0:100:56
+21     35497953        rs2242920       G       C       .       PASS    AA=G;DP=121     GT:GQ:DP        1|1:81:28       0|1:25:22       1|0:100:67
+12     121690178       rs7295105       G       A       .       PASS    AA=A;DP=126     GT:GQ:DP        1|1:81:28       0|1:33:20       1|0:100:79
+1      238703639       rs4659973       T       C       .       PASS    AA=t;DP=125;HM2 GT:GQ:DP        1|1:81:28       0|1:43:20       1|0:100:39
+11     89506219        rs7109688       A       G       .       PASS    AA=A;DP=108     GT:GQ:DP        1|1:81:28       0|1:43:24       1|0:100:56
+2      236728695       rs11897565      T       C       .       PASS    AA=T;DP=119     GT:GQ:DP        1|1:81:28       0|1:52:26       1|0:100:69
+3      186020199       rs4686427       G       A       .       PASS    AA=A;DP=121     GT:GQ:DP        1|1:81:28       0|1:54:20       1|0:100:74
+21     45806899        rs944423        G       A       .       PASS    AA=G;DP=107     GT:GQ:DP        1|1:81:28       0|1:66:17       1|0:100:62
+13     28761365        rs7319242       T       C       .       PASS    AA=C;DP=115     GT:GQ:DP        1|1:81:28       0|1:74:14       1|0:100:74
+7      9533417 rs10233865      A       T       .       PASS    AA=T;DP=120     GT:GQ:DP        1|1:81:28       0|1:76:14       1|0:100:77
+16     58642476        rs36541 A       G       .       PASS    AA=a;DP=105     GT:GQ:DP        1|1:81:28       0|1:84:22       1|0:100:55
+18     48378652        rs898437        T       A       .       PASS    AA=A;DP=114     GT:GQ:DP        1|1:81:28       0|1:86:13       1|0:100:75
+5      156353925       rs2902128       C       T       .       PASS    AA=T;DP=119     GT:GQ:DP        1|1:81:28       0|1:86:22       1|0:100:69
+12     106487189       rs2041892       T       C       .       PASS    AA=t;DP=117     GT:GQ:DP        1|1:81:28       0|1:87:24       1|0:100:65
+9      96293399        rs7031088       A       C       .       PASS    AA=N;DP=96      GT:GQ:DP        1|1:81:28       0|1:89:24       1|0:100:43
+6      7085830 rs1285886       G       A       .       PASS    AA=A;DP=123     GT:GQ:DP        1|1:81:28       0|1:92:18       1|0:100:76
+14     71301969        rs1204967       T       C       .       PASS    AA=T;DP=113     GT:GQ:DP        1|1:81:28       0|1:93:25       1|0:100:55
+12     51530903        rs7135048       G       A       .       PASS    AA=G;DP=119     GT:GQ:DP        1|1:81:28       1|0:100:18      1|1:100:66
+5      30053808        rs1009407       C       T       .       PASS    AA=C;DP=104     GT:GQ:DP        1|1:81:28       1|0:100:20      1|1:100:54
+7      837895  rs4719499       T       C       .       PASS    AA=T;DP=108     GT:GQ:DP        1|1:81:28       1|0:100:20      1|1:100:59
+12     44801156        rs2408467       G       A       .       PASS    AA=A;DP=122     GT:GQ:DP        1|1:81:28       1|0:100:20      1|1:100:76
+15     85409403        rs10775241      G       C       .       PASS    AA=C;DP=109     GT:GQ:DP        1|1:81:28       1|0:100:21      1|1:100:59
+14     35619994        rs1930766       A       G       .       PASS    AA=G;DP=108     GT:GQ:DP        1|1:81:28       1|0:100:22      1|1:100:60
+18     69758990        rs9952074       A       G       .       PASS    AA=G;DP=121     GT:GQ:DP        1|1:81:28       1|0:100:24      1|1:100:71
+17     10880116        rs4792094       C       T       .       PASS    AA=C;DP=119     GT:GQ:DP        1|1:81:28       1|0:100:25      1|1:100:66
+17     30826878        rs34646901      C       A       .       PASS    AA=A;DP=110     GT:GQ:DP        1|1:81:28       1|0:100:26      1|1:100:56
+1      54688410        rs11206363      C       T       .       PASS    AA=T;DP=123;HM2 GT:GQ:DP        1|1:81:28       1|0:100:28      1|1:100:67
+5      94823358        rs10476648      G       A       .       PASS    AA=A;DP=112     GT:GQ:DP        1|1:81:28       1|0:100:29      1|1:100:45
+12     108265748       rs10850056      T       C       .       PASS    AA=C;DP=127     GT:GQ:DP        1|1:81:28       1|0:100:29      1|1:100:69
+18     2496568 rs2644181       G       A       .       PASS    AA=A;DP=123     GT:GQ:DP        1|1:81:28       1|0:100:38      1|1:100:56
+4      80197965        rs286465        A       G       .       PASS    AA=A;DP=135     GT:GQ:DP        1|1:81:28       1|0:100:38      1|1:100:71
+16     15654613        rs4781678       C       A       .       PASS    AA=A;DP=166     GT:GQ:DP        1|1:81:28       1|0:100:38      1|1:100:89
+5      34593003        rs13436782      T       C       .       PASS    AA=T;DP=118     GT:GQ:DP        1|1:81:28       1|0:34:20       1|1:100:70
+11     27031663        rs1445317       C       A       .       PASS    AA=A;DP=100     GT:GQ:DP        1|1:81:28       1|0:50:10       1|1:100:40
+16     85610660        rs6539993       G       C       .       PASS    AA=C;DP=121     GT:GQ:DP        1|1:81:28       1|0:62:17       1|1:100:72
+13     31412028        rs799522        T       C       .       PASS    AA=T;DP=124     GT:GQ:DP        1|1:81:28       1|0:74:23       1|1:100:74
+6      68483177        rs9885766       G       A       .       PASS    AA=G;DP=80      GT:GQ:DP        1|1:81:28       1|0:79:14       1|1:81:28
+21     18576888        rs60152541      G       A       .       PASS    AA=A;DP=121     GT:GQ:DP        1|1:81:28       1|0:88:25       1|1:100:66
+14     20702035        .       A       G       .       PASS    AA=a;DP=109     GT:GQ:DP        1|1:81:28       1|0:89:22       1|1:100:60
+19     62429847        rs8111990       G       C       .       PASS    AA=C;DP=133     GT:GQ:DP        1|1:81:28       1|0:91:21       1|1:100:40
+4      109700767       rs7664892       A       C       .       PASS    AA=C;DP=92      GT:GQ:DP        1|1:81:28       1|0:95:14       1|1:100:49
+2      2470906 rs11127350      C       G       .       PASS    AA=C;DP=108     GT:GQ:DP        1|1:81:28       1|0:95:19       1|1:100:63
+1      221584769       rs825131        T       C       .       PASS    AA=C;DP=126     GT:GQ:DP        1|1:81:28       1|0:98:25       1|1:100:65
+16     84505280        rs903202        T       C       .       PASS    AA=C;DP=125     GT:GQ:DP        1|1:81:29       0|1:100:16      1|0:100:82
+11     90636117        rs985582        C       G       .       PASS    AA=G;DP=104     GT:GQ:DP        1|1:81:29       0|1:100:17      1|0:100:57
+18     10048175        rs564593        T       C       .       PASS    AA=C;DP=115     GT:GQ:DP        1|1:81:29       0|1:100:21      1|0:100:64
+11     85531824        rs2888903       G       T       .       PASS    AA=T;DP=91      GT:GQ:DP        1|1:81:29       0|1:100:22      1|0:100:36
+4      181346018       rs28697893      C       G       .       PASS    AA=C;DP=102     GT:GQ:DP        1|1:81:29       0|1:100:22      1|0:100:49
+7      42547921        rs10246930      A       G       .       PASS    AA=A;DP=118     GT:GQ:DP        1|1:81:29       0|1:100:22      1|0:100:72
+4      101690779       rs2567398       A       C       .       PASS    AA=C;DP=127     GT:GQ:DP        1|1:81:29       0|1:100:22      1|0:100:80
+19     32912685        rs4313907       G       T       .       PASS    AA=.;DP=118     GT:GQ:DP        1|1:81:29       0|1:100:25      1|0:100:65
+18     12149398        rs4299212       A       T       .       PASS    AA=A;DP=109     GT:GQ:DP        1|1:81:29       0|1:100:26      1|0:100:53
+10     128272875       rs1370106       A       C       .       PASS    AA=A;DP=135     GT:GQ:DP        1|1:81:29       0|1:100:36      1|0:100:72
+9      121615964       rs7873996       C       T       .       PASS    AA=C;DP=112     GT:GQ:DP        1|1:81:29       0|1:28:18       1|0:100:65
+16     50523077        rs4784884       T       C       .       PASS    AA=C;DP=127     GT:GQ:DP        1|1:81:29       0|1:51:19       1|0:100:76
+7      47147121        rs10235993      G       A       .       PASS    AA=A;DP=101     GT:GQ:DP        1|1:81:29       0|1:54:16       1|0:100:56
+6      112193577       .       C       T       .       PASS    AA=T;DP=126     GT:GQ:DP        1|1:81:29       0|1:80:24       1|0:100:73
+8      144192540       rs11986504      C       T       .       PASS    AA=C;DP=94      GT:GQ:DP        1|1:81:29       0|1:83:12       1|0:100:55
+3      160936063       rs6767038       C       T       .       PASS    AA=T;DP=134     GT:GQ:DP        1|1:81:29       0|1:89:18       1|0:100:88
+19     56405555        rs3987765       G       T       .       PASS    AA=N;DP=126     GT:GQ:DP        1|1:81:29       1|0:100:21      1|1:100:81
+13     104438648       rs7319082       G       A       .       PASS    AA=A;DP=88      GT:GQ:DP        1|1:81:29       1|0:100:27      1|1:75:25
+8      9918117 rs10216650      G       C       .       PASS    AA=G;DP=115     GT:GQ:DP        1|1:81:29       1|0:100:28      1|1:100:47
+7      145082634       rs28509351      T       C       .       PASS    AA=C;DP=107     GT:GQ:DP        1|1:81:29       1|0:100:29      1|1:100:38
+10     87189251        rs2882637       G       A       .       PASS    AA=G;DP=134     GT:GQ:DP        1|1:81:29       1|0:56:21       1|1:100:84
+16     2234891 rs26845 T       G       .       PASS    AA=T;DP=110     GT:GQ:DP        1|1:81:29       1|0:64:12       1|1:100:71
+5      171425724       rs61466410      G       T       .       PASS    AA=G;DP=131     GT:GQ:DP        1|1:81:29       1|0:87:26       1|1:100:78
+2      188805914       rs12693487      T       C       .       PASS    AA=C;DP=109     GT:GQ:DP        1|1:81:29       1|1:65:21       1|1:100:57
+16     77397924        rs1554976       T       A       .       PASS    AA=T;DP=108     GT:GQ:DP        1|1:81:30       0|1:100:19      1|0:100:59
+3      111497211       rs2712988       G       A       .       PASS    AA=A;DP=123     GT:GQ:DP        1|1:81:30       0|1:100:30      1|0:100:62
+16     1978582 rs28452667      G       T       .       PASS    AA=T;DP=115     GT:GQ:DP        1|1:81:30       0|1:20:15       1|0:100:71
+4      105173400       rs979022        T       C       .       PASS    AA=C;DP=101     GT:GQ:DP        1|1:81:30       0|1:46:7        1|0:100:58
+11     61043573        rs3019202       A       T       .       PASS    AA=T;DP=140     GT:GQ:DP        1|1:81:30       0|1:98:25       1|0:100:47
+8      1711156 rs10100341      A       G       .       PASS    AA=A;DP=142     GT:GQ:DP        1|1:81:30       1|0:100:31      1|1:100:81
+8      139445988       .       A       G       .       PASS    AA=G;DP=144     GT:GQ:DP        1|1:81:31       0|1:100:25      1|0:100:87
+7      85057843        rs10264688      C       T       .       PASS    AA=T;DP=129     GT:GQ:DP        1|1:81:31       1|0:100:29      1|1:100:72
+1      220041555       rs3010846       T       C       .       PASS    AA=C;DP=125;HM2 GT:GQ:DP        1|1:81:31       1|1:47:15       1|1:100:79
+13     18453239        rs9510862       T       C       .       PASS    AA=N;DP=110     GT:GQ:DP        1|1:81:31       1|1:55:28       1|1:100:52
+19     56208459        rs2691257       G       T       .       PASS    AA=g;DP=112     GT:GQ:DP        1|1:81:31       1|1:77:24       1|1:100:57
+4      141904468       rs2321558       C       T       .       PASS    AA=C;DP=124     GT:GQ:DP        1|1:81:32       0|1:100:22      1|0:100:69
+16     53076473        rs1420289       T       C       .       PASS    AA=t;DP=140     GT:GQ:DP        1|1:81:32       0|1:86:16       1|0:100:53
+7      154922681       rs12538270      G       A       .       PASS    AA=G;DP=97      GT:GQ:DP        1|1:81:32       1|1:39:12       1|1:100:53
+1      145288493       rs2353986       T       C       .       PASS    AA=C;DP=134;HM2 GT:GQ:DP        1|1:81:33       0|1:40:24       1|0:100:78
+1      112316638       rs730023        C       G       .       PASS    AA=C;DP=129;HM2 GT:GQ:DP        1|1:81:33       1|0:100:22      1|1:90:30
+10     132048016       rs7091159       G       A       .       PASS    AA=G;DP=134     GT:GQ:DP        1|1:81:34       0|0:22:18       1|0:100:32
+5      37808537        rs10472291      C       A       .       PASS    AA=A;DP=114     GT:GQ:DP        1|1:81:34       1|1:65:20       1|1:100:61
+8      40018368        rs4736820       G       A       .       PASS    AA=A;DP=127     GT:GQ:DP        1|1:81:35       0|1:100:20      1|0:100:72
+6      13223612        rs6458641       C       G       .       PASS    AA=C;DP=162     GT:GQ:DP        1|1:81:37       0|0:100:35      1|0:100:92
+21     29761237        rs11088120      C       A       .       PASS    AA=A;DP=142     GT:GQ:DP        1|1:81:37       1|1:35:20       1|1:100:84
+5      141152675       rs460388        C       G       .       PASS    AA=G;DP=120     GT:GQ:DP        1|1:81:37       1|1:41:13       1|1:100:71
+1      201917601       rs10751451      C       T       .       PASS    AA=T;DP=133;HM2 GT:GQ:DP        1|1:81:37       1|1:49:21       1|1:100:75
+17     15199019        rs230978        T       C       .       PASS    AA=C;DP=128     GT:GQ:DP        1|1:81:37       1|1:59:18       1|1:100:73
+15     66742919        rs7173475       A       C       .       PASS    AA=C;DP=129     GT:GQ:DP        1|1:81:37       1|1:62:19       1|1:100:74
+5      96229110        rs2911134       T       G       .       PASS    AA=G;DP=124     GT:GQ:DP        1|1:81:37       1|1:65:20       1|1:100:64
+3      120003493       rs798589        A       G       .       PASS    AA=a;DP=126     GT:GQ:DP        1|1:81:37       1|1:69:26       1|1:100:64
+1      38684175        rs2255879       T       A       .       PASS    AA=A;DP=119;HM2 GT:GQ:DP        1|1:81:37       1|1:71:23       1|1:100:57
+15     41509369        rs689767        G       C       .       PASS    AA=C;DP=137     GT:GQ:DP        1|1:81:37       1|1:71:28       1|1:100:72
+21     45349411        rs449191        G       A       .       PASS    AA=A;DP=126     GT:GQ:DP        1|1:81:37       1|1:74:24       1|1:100:66
+6      132053687       rs9483321       T       A       .       PASS    AA=A;DP=155     GT:GQ:DP        1|1:81:37       1|1:89:30       1|1:100:88
+9      72780801        rs2909293       G       C       .       PASS    AA=G;DP=143     GT:GQ:DP        1|1:81:39       1|0:100:28      1|1:100:80
+8      142534214       rs7822102       G       C       .       PASS    AA=C;DP=150     GT:GQ:DP        1|1:81:40       0|1:100:19      1|0:100:89
+18     42637673        rs509647        G       T       .       PASS    AA=T;DP=126     GT:GQ:DP        1|1:81:40       0|1:100:22      1|0:100:66
+4      17058001        rs2518652       A       G       .       PASS    AA=G;DP=160     GT:GQ:DP        1|1:81:40       0|1:100:32      1|0:100:90
+3      8640360 rs9809581       A       G       .       PASS    AA=A;DP=117     GT:GQ:DP        1|1:81:40       1|0:23:13       1|1:100:67
+4      2791121 rs6820967       T       G       .       PASS    AA=G;DP=95      GT:GQ:DP        1|1:82:26       1|1:15:13       1|1:100:51
+20     10654876        rs2423516       A       C       .       PASS    AA=C;DP=119     GT:GQ:DP        1|1:82:27       1|1:13:15       1|1:100:75
+11     68971625        rs6606644       C       G       .       PASS    AA=G;DP=119     GT:GQ:DP        1|1:82:28       1|1:65:26       1|1:100:62
+4      17883845        rs6836409       G       A       .       PASS    AA=g;DP=131     GT:GQ:DP        1|1:82:29       0|0:100:38      1|0:100:65
+2      102778492       rs960011        C       T       .       PASS    AA=T;DP=129     GT:GQ:DP        1|1:82:29       0|0:10:13       1|0:100:47
+7      103636498       rs10953410      C       T       .       PASS    AA=C;DP=101     GT:GQ:DP        1|1:82:29       0|0:20:17       1|0:100:56
+4      118144530       .       A       C       .       PASS    AA=A;DP=81      GT:GQ:DP        1|1:82:29       0|0:36:18       1|0:100:22
+14     76755210        rs978607        C       G       .       PASS    AA=G;DP=108     GT:GQ:DP        1|1:82:29       0|0:39:13       1|0:100:64
+9      101394185       rs7866140       G       T       .       PASS    AA=G;DP=133     GT:GQ:DP        1|1:82:29       0|0:44:26       1|0:100:81
+6      109384601       rs12193858      A       T       .       PASS    AA=A;DP=100     GT:GQ:DP        1|1:82:29       0|0:45:15       1|0:100:56
+19     50431719        rs10420259      A       G       .       PASS    AA=a;DP=115     GT:GQ:DP        1|1:82:29       0|0:45:15       1|0:100:72
+8      83111633        rs7813892       C       T       .       PASS    AA=T;DP=97      GT:GQ:DP        1|1:82:29       0|0:48:18       1|0:100:39
+13     22086713        rs11841523      A       G       .       PASS    AA=A;DP=118     GT:GQ:DP        1|1:82:29       0|0:57:19       1|0:100:59
+16     20195679        rs56692591      T       C       .       PASS    AA=C;DP=138     GT:GQ:DP        1|1:82:29       0|0:57:19       1|0:100:91
+4      80083391        rs7677084       T       C       .       PASS    AA=C;DP=133     GT:GQ:DP        1|1:82:29       0|0:57:21       1|0:100:75
+19     61191157        rs306455        A       G       .       PASS    AA=N;DP=151     GT:GQ:DP        1|1:82:29       0|0:58:31       1|0:100:47
+11     132983346       rs11223529      A       G       .       PASS    AA=A;DP=113     GT:GQ:DP        1|1:82:29       0|0:60:20       1|0:100:67
+7      121244061       rs10278543      G       A       .       PASS    AA=a;DP=113     GT:GQ:DP        1|1:82:29       0|0:60:20       1|0:100:67
+12     100178691       rs697216        T       C       .       PASS    AA=C;DP=135     GT:GQ:DP        1|1:82:29       0|0:60:23       1|0:100:31
+16     1621770 rs8050447       C       T       .       PASS    AA=T;DP=161     GT:GQ:DP        1|1:82:29       0|0:62:39       1|0:100:48
+12     19319276        rs2279537       T       A       .       PASS    AA=T;DP=121     GT:GQ:DP        1|1:82:29       0|0:63:21       1|0:100:70
+5      12074859        rs13158816      A       G       .       PASS    AA=A;DP=120     GT:GQ:DP        1|1:82:29       0|0:63:21       1|0:100:70
+3      13082597        rs360873        C       T       .       PASS    AA=C;DP=116     GT:GQ:DP        1|1:82:29       0|0:63:24       1|0:100:63
+20     51079663        rs6097198       A       G       .       PASS    AA=A;DP=130     GT:GQ:DP        1|1:82:29       0|0:66:22       1|0:100:35
+2      111372792       rs34667727      A       G       .       PASS    AA=A;DP=112     GT:GQ:DP        1|1:82:29       0|0:66:22       1|0:100:61
+16     12798399        rs7201489       G       A       .       PASS    AA=g;DP=124     GT:GQ:DP        1|1:82:29       0|0:66:22       1|0:100:73
+16     10067905        rs8062225       C       T       .       PASS    AA=T;DP=152     GT:GQ:DP        1|1:82:29       0|0:66:23       1|0:100:53
+4      181707995       rs3113742       C       T       .       PASS    AA=T;DP=109     GT:GQ:DP        1|1:82:29       0|0:66:23       1|0:100:57
+7      67163509        rs2533479       C       T       .       PASS    AA=C;DP=111     GT:GQ:DP        1|1:82:29       0|0:69:23       1|0:100:59
+1      186705660       rs6685437       T       A       .       PASS    AA=T;DP=121;HM2 GT:GQ:DP        1|1:82:29       0|0:69:23       1|0:100:70
+11     8485949 rs7116240       T       C       .       PASS    AA=T;DP=110     GT:GQ:DP        1|1:82:29       0|0:72:24       1|0:100:48
+10     7137544 .       T       A       .       PASS    AA=T;DP=127     GT:GQ:DP        1|1:82:29       0|0:75:25       1|0:100:71
+18     7538731 rs510314        T       A       .       PASS    AA=A;DP=105     GT:GQ:DP        1|1:82:29       0|0:78:26       1|0:100:49
+18     5287603 rs1893482       A       G       .       PASS    AA=a;DP=148     GT:GQ:DP        1|1:82:29       0|0:78:26       1|0:100:90
+8      145146344       rs59538082      G       A       .       PASS    AA=.;DP=115     GT:GQ:DP        1|1:82:29       0|0:81:27       1|0:100:59
+2      50098715        rs6545145       T       G       .       PASS    AA=G;DP=110     GT:GQ:DP        1|1:82:29       0|0:81:28       1|0:100:53
+16     25701169        rs4520838       T       C       .       PASS    AA=C;DP=146     GT:GQ:DP        1|1:82:29       0|0:84:28       1|0:100:46
+8      92814570        .       A       G       .       PASS    AA=A;DP=122     GT:GQ:DP        1|1:82:29       0|0:84:28       1|0:100:65
+2      135698006       .       T       C       .       PASS    AA=T;DP=125     GT:GQ:DP        1|1:82:29       0|0:87:29       1|0:100:65
+13     66110941        rs9540846       A       T       .       PASS    AA=A;DP=129     GT:GQ:DP        1|1:82:29       1|1:58:29       1|1:100:72
+12     41004819        rs11181422      G       A       .       PASS    AA=A;DP=117     GT:GQ:DP        1|1:82:29       1|1:89:29       1|1:100:45
+6      14253559        rs16874720      A       G       .       PASS    AA=G;DP=169     GT:GQ:DP        1|1:82:30       0|0:100:40      1|0:100:58
+5      64366810        .       T       C       .       PASS    AA=T;DP=133     GT:GQ:DP        1|1:82:30       0|0:14:19       1|0:100:87
+3      30756171        .       C       G       .       PASS    AA=C;DP=111     GT:GQ:DP        1|1:82:30       0|0:34:15       1|0:100:53
+10     59328961        rs7905135       C       T       .       PASS    AA=T;DP=100     GT:GQ:DP        1|1:82:30       0|0:46:22       1|0:100:49
+11     116576067       rs664971        G       A       .       PASS    AA=G;DP=139     GT:GQ:DP        1|1:82:30       0|0:48:16       1|0:100:50
+7      141842991       rs361396        G       A       .       PASS    AA=G;DP=110     GT:GQ:DP        1|1:82:30       0|0:48:16       1|0:100:61
+5      120021309       rs7736461       A       G       .       PASS    AA=A;DP=115     GT:GQ:DP        1|1:82:30       0|0:51:17       1|0:100:70
+13     60055718        rs4886241       T       C       .       PASS    AA=T;DP=152     GT:GQ:DP        1|1:82:30       0|0:53:28       1|0:100:46
+11     51109871        rs4312050       G       T       .       PASS    AA=.;DP=109     GT:GQ:DP        1|1:82:30       0|0:54:18       1|0:100:61
+3      144799236       rs16853920      T       C       .       PASS    AA=C;DP=115     GT:GQ:DP        1|1:82:30       0|0:54:18       1|0:100:65
+9      123716381       rs13296029      T       C       .       PASS    AA=t;DP=147     GT:GQ:DP        1|1:82:30       0|0:57:20       1|0:100:53
+16     20231839        .       G       A       .       PASS    AA=G;DP=96      GT:GQ:DP        1|1:82:30       0|0:57:22       1|0:100:43
+3      54665399        rs6800366       T       C       .       PASS    AA=C;DP=131     GT:GQ:DP        1|1:82:30       0|0:60:21       1|0:100:81
+11     9774708 rs429835        G       A       .       PASS    AA=A;DP=121     GT:GQ:DP        1|1:82:30       0|0:63:21       1|0:100:70
+2      242688962       rs55758933      T       C       .       PASS    AA=.;DP=118     GT:GQ:DP        1|1:82:30       0|0:63:21       1|0:100:71
+5      75410078        .       T       C       .       PASS    AA=T;DP=135     GT:GQ:DP        1|1:82:30       0|0:63:23       1|0:100:85
+3      142469607       rs2086181       C       G       .       PASS    AA=C;DP=145     GT:GQ:DP        1|1:82:30       0|0:66:22       1|0:100:44
+15     23511722        rs744280        C       T       .       PASS    AA=C;DP=149     GT:GQ:DP        1|1:82:30       0|0:66:23       1|0:100:93
+14     103866534       rs10148829      A       G       .       PASS    AA=G;DP=148     GT:GQ:DP        1|1:82:30       0|0:69:23       1|0:100:102
+19     23159705        rs7247358       A       G       .       PASS    AA=A;DP=113     GT:GQ:DP        1|1:82:30       0|0:73:26       1|0:100:61
+4      165365920       rs57494332      A       T       .       PASS    AA=A;DP=107     GT:GQ:DP        1|1:82:30       0|0:75:25       1|0:100:41
+9      624094  rs6477055       A       T       .       PASS    AA=A;DP=142     GT:GQ:DP        1|1:82:30       0|0:78:26       1|0:100:40
+13     93009018        rs9589766       C       T       .       PASS    AA=C;DP=112     GT:GQ:DP        1|1:82:30       0|0:78:27       1|0:100:55
+1      210772747       rs6692374       A       G       .       PASS    AA=A;DP=150;HM2 GT:GQ:DP        1|1:82:30       0|0:87:29       1|0:100:49
+3      152677570       rs9289840       A       C       .       PASS    AA=A;DP=124     GT:GQ:DP        1|1:82:30       0|0:96:32       1|0:100:61
+15     25399675        rs56174531      A       G       .       PASS    AA=a;DP=112     GT:GQ:DP        1|1:82:30       0|0:99:34       1|0:100:49
+3      182093479       rs9847050       G       A       .       PASS    AA=A;DP=97      GT:GQ:DP        1|1:82:30       1|1:53:16       1|1:100:51
+5      121445362       rs840464        G       T       .       PASS    AA=G;DP=154     GT:GQ:DP        1|1:82:30       1|1:86:31       1|1:100:86
+1      231022606       rs2795459       T       A       .       PASS    AA=T;DP=119     GT:GQ:DP        1|1:82:31       0|0:36:13       1|0:100:77
+1      65101688        rs2780902       C       T       .       PASS    AA=C;DP=135;HM2;HM3     GT:GQ:DP        1|1:82:31       0|0:87:29       1|0:100:73
+8      139403042       rs11166808      A       G       .       PASS    AA=A;DP=136     GT:GQ:DP        1|1:82:31       0|0:96:32       1|0:100:78
+9      3971734 rs641255        T       C       .       PASS    AA=.;DP=124     GT:GQ:DP        1|1:82:32       0|0:33:22       1|0:100:72
+10     33762467        rs7919463       C       T       .       PASS    AA=C;DP=109     GT:GQ:DP        1|1:82:32       0|0:58:24       1|0:100:54
+18     11063734        rs12458630      C       T       .       PASS    AA=C;DP=113     GT:GQ:DP        1|1:82:32       0|0:60:20       1|0:100:62
+13     94796058        rs2485972       G       A       .       PASS    AA=g;DP=93      GT:GQ:DP        1|1:82:32       0|1:68:10       1|0:100:51
+1      85038039        rs4907099       G       A       .       PASS    AA=A;DP=110     GT:GQ:DP        1|1:82:32       1|1:74:23       1|1:100:58
+21     35150260        rs6517259       A       T       .       PASS    AA=T;DP=141     GT:GQ:DP        1|1:82:32       1|1:83:26       1|1:100:42
+3      6828661 rs11131053      T       G       .       PASS    AA=T;DP=129     GT:GQ:DP        1|1:82:33       0|0:84:28       1|0:100:65
+16     30908596        rs4889605       T       C       .       PASS    AA=C;DP=122     GT:GQ:DP        1|1:82:33       1|1:24:17       1|1:100:61
+14     33068792        rs2180954       T       G       .       PASS    AA=G;DP=128     GT:GQ:DP        1|1:82:33       1|1:77:24       1|1:100:69
+12     53502669        rs7299150       G       A       .       PASS    AA=A;DP=121     GT:GQ:DP        1|1:82:34       1|1:62:19       1|1:100:52
+1      239772139       rs2152457       T       C       .       PASS    AA=C;DP=112     GT:GQ:DP        1|1:82:34       1|1:64:26       1|1:100:51
+21     26873950        rs28795732      T       C       .       PASS    AA=t;DP=124     GT:GQ:DP        1|1:82:35       0|0:87:29       1|0:100:62
+10     132130439       rs184844        C       T       .       PASS    AA=T;DP=133     GT:GQ:DP        1|1:82:35       1|0:100:20      1|1:100:77
+12     51421769        rs4761948       G       A       .       PASS    AA=.;DP=138     GT:GQ:DP        1|1:82:35       1|1:74:23       1|1:100:80
+6      6768165 rs9504939       T       G       .       PASS    AA=G;DP=112     GT:GQ:DP        1|1:82:36       0|1:82:18       1|0:100:45
+8      66062056        rs6996939       C       G       .       PASS    AA=G;DP=152     GT:GQ:DP        1|1:82:38       1|0:100:31      1|1:100:84
+16     84260126        rs746957        C       T       .       PASS    AA=C;DP=135     GT:GQ:DP        1|1:82:41       0|0:72:25       1|0:100:68
+5      148222860       rs10077282      A       G       .       PASS    AA=A;DP=161     GT:GQ:DP        1|1:82:41       0|0:75:26       1|0:100:53
+16     5580696 rs7206258       T       G       .       PASS    AA=G;DP=133     GT:GQ:DP        1|1:82:44       0|0:78:26       1|0:100:64
+7      37902811        rs2598121       C       T       .       PASS    AA=T;DP=109     GT:GQ:DP        1|1:83:26       1|1:100:33      1|1:100:41
+3      74237823        rs278481        C       T       .       PASS    AA=T;DP=121     GT:GQ:DP        1|1:83:26       1|1:100:35      1|1:100:60
+2      106837368       rs7591237       C       G       .       PASS    AA=G;DP=142     GT:GQ:DP        1|1:83:26       1|1:100:42      1|1:100:74
+12     79169930        rs2100258       A       T       .       PASS    AA=T;DP=77      GT:GQ:DP        1|1:83:26       1|1:17:16       1|1:73:28
+3      165678012       rs298742        A       G       .       PASS    AA=N;DP=91      GT:GQ:DP        1|1:83:26       1|1:18:7        1|1:100:58
+1      100568589       rs587510        A       T       .       PASS    AA=A;DP=79;HM2  GT:GQ:DP        1|1:83:26       1|1:21:17       1|1:96:25
+6      121696208       rs6924917       A       C       .       PASS    AA=C;DP=94      GT:GQ:DP        1|1:83:26       1|1:22:11       1|1:100:56
+6      110118491       rs829810        A       G       .       PASS    AA=G;DP=82      GT:GQ:DP        1|1:83:26       1|1:23:6        1|1:94:50
+1      62139466        rs2499002       T       G       .       PASS    AA=T;DP=89;HM2;HM3      GT:GQ:DP        1|1:83:26       1|1:24:17       1|1:100:49
+11     75563731        rs589149        C       T       .       PASS    AA=T;DP=99      GT:GQ:DP        1|1:83:26       1|1:25:17       1|1:100:44
+11     91340197        rs1945871       C       G       .       PASS    AA=G;DP=108     GT:GQ:DP        1|1:83:26       1|1:25:17       1|1:100:64
+18     44779478        rs10853573      G       A       .       PASS    AA=A;DP=93      GT:GQ:DP        1|1:83:26       1|1:28:17       1|1:100:38
+12     73135499        rs2365915       T       C       .       PASS    AA=C;DP=116     GT:GQ:DP        1|1:83:26       1|1:29:19       1|1:100:72
+2      153373485       rs10153728      G       A       .       PASS    AA=G;DP=107     GT:GQ:DP        1|1:83:26       1|1:32:20       1|1:100:64
+8      89491705        rs28671153      T       C       .       PASS    AA=C;DP=101     GT:GQ:DP        1|1:83:26       1|1:35:20       1|1:100:55
+14     101684714       rs1190579       G       T       .       PASS    AA=t;DP=118     GT:GQ:DP        1|1:83:26       1|1:35:21       1|1:100:27
+8      6888783 rs13261750      C       A       .       PASS    AA=.;DP=99      GT:GQ:DP        1|1:83:26       1|1:35:21       1|1:100:51
+8      15064352        rs268413        T       G       .       PASS    AA=G;DP=109     GT:GQ:DP        1|1:83:26       1|1:40:20       1|1:100:62
+17     53133410        rs12938363      C       A       .       PASS    AA=A;DP=104     GT:GQ:DP        1|1:83:26       1|1:41:12       1|1:100:66
+5      60421653        rs9291706       C       A       .       PASS    AA=A;DP=81      GT:GQ:DP        1|1:83:26       1|1:41:13       1|1:100:30
+16     60215487        rs16963695      T       A       .       PASS    AA=A;DP=107     GT:GQ:DP        1|1:83:26       1|1:41:18       1|1:100:60
+14     38582984        rs7153125       G       T       .       PASS    AA=T;DP=131     GT:GQ:DP        1|1:83:26       1|1:41:23       1|1:100:44
+14     51915366        rs781360        G       T       .       PASS    AA=T;DP=104     GT:GQ:DP        1|1:83:26       1|1:43:24       1|1:100:54
+6      158797044       rs635920        A       G       .       PASS    AA=G;DP=105     GT:GQ:DP        1|1:83:26       1|1:43:24       1|1:100:54
+1      38240663        rs7512757       A       G       .       PASS    AA=G;DP=95;HM2  GT:GQ:DP        1|1:83:26       1|1:44:13       1|1:100:58
+15     67744950        rs8038943       A       G       .       PASS    AA=G;DP=119     GT:GQ:DP        1|1:83:26       1|1:44:14       1|1:100:72
+2      121231577       rs776506        T       C       .       PASS    AA=C;DP=92      GT:GQ:DP        1|1:83:26       1|1:44:15       1|1:100:53
+4      146327625       rs1455134       T       C       .       PASS    AA=C;DP=105     GT:GQ:DP        1|1:83:26       1|1:46:29       1|1:100:41
+7      17838618        rs1524776       C       A       .       PASS    AA=A;DP=100     GT:GQ:DP        1|1:83:26       1|1:47:14       1|1:100:60
+1      164864712       rs505012        T       C       .       PASS    AA=T;DP=109;HM2 GT:GQ:DP        1|1:83:26       1|1:47:15       1|1:100:64
+18     71062175        rs1866732       A       G       .       PASS    AA=G;DP=141     GT:GQ:DP        1|1:83:26       1|1:47:16       1|1:100:71
+22     15582602        rs2845379       T       C       .       PASS    AA=T;DP=116     GT:GQ:DP        1|1:83:26       1|1:47:20       1|1:100:71
+2      157707376       rs12468901      C       T       .       PASS    AA=T;DP=86      GT:GQ:DP        1|1:83:26       1|1:48:17       1|1:100:36
+1      52620059        rs3087474       C       T       .       PASS    AA=T;DP=117;HM2;HM3     GT:GQ:DP        1|1:83:26       1|1:49:21       1|1:100:72
+11     126539861       rs1893861       A       G       .       PASS    AA=G;DP=125     GT:GQ:DP        1|1:83:26       1|1:49:26       1|1:100:72
+10     90556223        rs303532        A       T       .       PASS    AA=T;DP=95      GT:GQ:DP        1|1:83:26       1|1:50:15       1|1:100:40
+6      96355252        rs1592344       C       G       .       PASS    AA=G;DP=84      GT:GQ:DP        1|1:83:26       1|1:50:15       1|1:100:44
+1      203853258       rs10900517      A       T       .       PASS    AA=A;DP=90      GT:GQ:DP        1|1:83:26       1|1:50:15       1|1:100:45
+4      46840671        rs17539069      G       T       .       PASS    AA=G;DP=102     GT:GQ:DP        1|1:83:26       1|1:50:15       1|1:100:45
+5      144570772       rs10067030      G       A       .       PASS    AA=A;DP=98      GT:GQ:DP        1|1:83:26       1|1:50:15       1|1:100:55
+7      40155306        rs6978474       C       G       .       PASS    AA=G;DP=109     GT:GQ:DP        1|1:83:26       1|1:50:15       1|1:100:66
+12     54505482        rs7956337       T       C       .       PASS    AA=C;DP=118     GT:GQ:DP        1|1:83:26       1|1:50:16       1|1:100:77
+6      149411851       rs6915298       C       T       .       PASS    AA=T;DP=133     GT:GQ:DP        1|1:83:26       1|1:50:21       1|1:100:87
+9      23122614        rs10757394      A       G       .       PASS    AA=G;DP=110     GT:GQ:DP        1|1:83:26       1|1:52:21       1|1:100:59
+1      72964735        rs2265970       G       A       .       PASS    AA=A;DP=114     GT:GQ:DP        1|1:83:26       1|1:52:22       1|1:100:65
+14     49964342        rs9323185       T       A       .       PASS    AA=A;DP=93      GT:GQ:DP        1|1:83:26       1|1:52:24       1|1:100:35
+7      43436520        rs10225452      T       G       .       PASS    AA=G;DP=104     GT:GQ:DP        1|1:83:26       1|1:52:24       1|1:100:54
+6      62652444        rs7772623       C       T       .       PASS    AA=T;DP=83      GT:GQ:DP        1|1:83:26       1|1:53:16       1|1:100:38
+4      36822317        rs4832879       G       A       .       PASS    AA=G;DP=87      GT:GQ:DP        1|1:83:26       1|1:53:16       1|1:100:46
+20     2785592 rs2325974       T       C       .       PASS    AA=C;DP=93      GT:GQ:DP        1|1:83:26       1|1:53:16       1|1:100:55
+9      122466077       rs4837789       G       A       .       PASS    AA=A;DP=100     GT:GQ:DP        1|1:83:26       1|1:53:16       1|1:100:55
+11     130324838       rs7111478       A       G       .       PASS    AA=G;DP=118     GT:GQ:DP        1|1:83:26       1|1:53:16       1|1:100:79
+19     52518937        rs10416837      A       C       .       PASS    AA=A;DP=121     GT:GQ:DP        1|1:83:26       1|1:53:16       1|1:100:82
+7      18184803        rs1178344       C       A       .       PASS    AA=A;DP=104     GT:GQ:DP        1|1:83:26       1|1:53:17       1|1:100:58
+4      184350872       rs4429760       T       C       .       PASS    AA=C;DP=106     GT:GQ:DP        1|1:83:26       1|1:53:17       1|1:100:62
+21     33282804        rs7281793       T       C       .       PASS    AA=C;DP=112     GT:GQ:DP        1|1:83:26       1|1:53:20       1|1:100:65
+11     130201649       rs2186741       T       C       .       PASS    AA=C;DP=138     GT:GQ:DP        1|1:83:26       1|1:53:25       1|1:100:88
+18     4123739 rs1402627       T       C       .       PASS    AA=C;DP=113     GT:GQ:DP        1|1:83:26       1|1:55:27       1|1:100:60
+7      44975031        rs10253506      T       C       .       PASS    AA=C;DP=118     GT:GQ:DP        1|1:83:26       1|1:56:17       1|1:100:34
+18     39354567        rs2622803       G       A       .       PASS    AA=.;DP=93      GT:GQ:DP        1|1:83:26       1|1:56:18       1|1:100:50
+16     54872860        rs2587878       T       C       .       PASS    AA=C;DP=108     GT:GQ:DP        1|1:83:26       1|1:56:18       1|1:100:64
+18     73095657        rs2850882       T       C       .       PASS    AA=C;DP=124     GT:GQ:DP        1|1:83:26       1|1:56:19       1|1:100:76
+6      156160242       rs7749754       C       T       .       PASS    AA=T;DP=115     GT:GQ:DP        1|1:83:26       1|1:56:25       1|1:100:64
+11     62917306        rs492995        A       G       .       PASS    AA=G;DP=87      GT:GQ:DP        1|1:83:26       1|1:59:18       1|1:100:36
+11     4775925 rs4910682       T       C       .       PASS    AA=C;DP=110     GT:GQ:DP        1|1:83:26       1|1:59:18       1|1:100:48
+12     9153994 rs226386        T       G       .       PASS    AA=g;DP=108     GT:GQ:DP        1|1:83:26       1|1:59:18       1|1:100:52
+6      67985132        rs2168933       C       T       .       PASS    AA=T;DP=99      GT:GQ:DP        1|1:83:26       1|1:59:18       1|1:100:53
+5      104720450       rs2102137       A       C       .       PASS    AA=A;DP=98      GT:GQ:DP        1|1:83:26       1|1:59:18       1|1:100:54
+19     37259967        rs1990216       A       G       .       PASS    AA=a;DP=114     GT:GQ:DP        1|1:83:26       1|1:59:18       1|1:100:71
+19     34175357        rs10415729      T       C       .       PASS    AA=T;DP=124     GT:GQ:DP        1|1:83:26       1|1:60:24       1|1:100:74
+1      96265077        rs1146530       A       C       .       PASS    AA=C;DP=139;HM2;HM3     GT:GQ:DP        1|1:83:26       1|1:60:30       1|1:100:82
+9      907667  rs2370220       T       C       .       PASS    AA=C;DP=123     GT:GQ:DP        1|1:83:26       1|1:61:25       1|1:100:75
+4      91334002        rs7664833       C       T       .       PASS    AA=N;DP=85      GT:GQ:DP        1|1:83:26       1|1:62:19       1|1:100:40
+5      109187616       rs958235        G       A       .       PASS    AA=A;DP=93      GT:GQ:DP        1|1:83:26       1|1:62:19       1|1:100:45
+12     182210  rs216250        A       G       .       PASS    AA=G;DP=104     GT:GQ:DP        1|1:83:26       1|1:62:19       1|1:100:63
+11     20572080        rs4537751       C       T       .       PASS    AA=T;DP=89      GT:GQ:DP        1|1:83:26       1|1:62:20       1|1:100:30
+5      136589617       rs919989        T       C       .       PASS    AA=C;DP=112     GT:GQ:DP        1|1:83:26       1|1:62:20       1|1:100:66
+2      37353939        rs11124575      G       C       .       PASS    AA=C;DP=118     GT:GQ:DP        1|1:83:26       1|1:62:20       1|1:100:76
+3      30164462        rs1991901       T       C       .       PASS    AA=C;DP=99      GT:GQ:DP        1|1:83:26       1|1:62:25       1|1:100:49
+7      34484361        rs7781857       G       T       .       PASS    AA=T;DP=97      GT:GQ:DP        1|1:83:26       1|1:64:25       1|1:100:37
+11     26527674        rs383087        C       T       .       PASS    AA=T;DP=92      GT:GQ:DP        1|1:83:26       1|1:65:20       1|1:100:34
+8      17995285        rs6586693       C       G       .       PASS    AA=G;DP=89      GT:GQ:DP        1|1:83:26       1|1:65:20       1|1:100:44
+5      79220197        rs4704599       A       G       .       PASS    AA=A;DP=120     GT:GQ:DP        1|1:83:26       1|1:65:20       1|1:100:73
+7      112515289       rs2140913       C       A       .       PASS    AA=A;DP=98      GT:GQ:DP        1|1:83:26       1|1:65:22       1|1:100:50
+3      67836348        rs1026536       T       C       .       PASS    AA=C;DP=100     GT:GQ:DP        1|1:83:26       1|1:65:22       1|1:100:54
+7      41252382        rs7796964       A       G       .       PASS    AA=G;DP=109     GT:GQ:DP        1|1:83:26       1|1:65:22       1|1:100:61
+5      110221630       rs4432941       G       T       .       PASS    AA=G;DP=98      GT:GQ:DP        1|1:83:26       1|1:66:32       1|1:100:30
+13     89893745        rs4500585       T       C       .       PASS    AA=C;DP=109     GT:GQ:DP        1|1:83:26       1|1:68:21       1|1:100:63
+7      146789658       rs7796057       C       G       .       PASS    AA=G;DP=106     GT:GQ:DP        1|1:83:26       1|1:68:22       1|1:100:55
+6      46996837        rs220718        T       C       .       PASS    AA=C;DP=105     GT:GQ:DP        1|1:83:26       1|1:68:22       1|1:100:59
+2      155343153       rs1445656       A       G       .       PASS    AA=G;DP=117     GT:GQ:DP        1|1:83:26       1|1:68:22       1|1:100:67
+17     3007043 rs12450934      A       G       .       PASS    AA=A;DP=122     GT:GQ:DP        1|1:83:26       1|1:68:22       1|1:100:79
+8      87787951        rs12675140      A       G       .       PASS    AA=G;DP=105     GT:GQ:DP        1|1:83:26       1|1:68:23       1|1:100:55
+8      10169176        rs2975657       C       T       .       PASS    AA=T;DP=141     GT:GQ:DP        1|1:83:26       1|1:68:23       1|1:100:94
+21     43046166        rs2401096       A       G       .       PASS    AA=G;DP=132     GT:GQ:DP        1|1:83:26       1|1:68:33       1|1:100:73
+11     97430968        rs589334        C       T       .       PASS    AA=T;DP=90      GT:GQ:DP        1|1:83:26       1|1:71:22       1|1:100:37
+12     130130939       rs4759839       A       G       .       PASS    AA=G;DP=90      GT:GQ:DP        1|1:83:26       1|1:71:22       1|1:100:42
+17     46599746        rs4605213       G       C       .       PASS    AA=.;DP=144     GT:GQ:DP        1|1:83:26       1|1:71:22       1|1:100:53
+6      19816074        rs9460403       G       A       .       PASS    AA=A;DP=102     GT:GQ:DP        1|1:83:26       1|1:71:22       1|1:100:55
+11     84337570        rs2155411       C       T       .       PASS    AA=T;DP=107     GT:GQ:DP        1|1:83:26       1|1:71:22       1|1:100:60
+5      40322167        rs6883840       G       A       .       PASS    AA=G;DP=122     GT:GQ:DP        1|1:83:26       1|1:71:22       1|1:100:75
+1      227704126       rs754023        A       T       .       PASS    AA=T;DP=93;HM2  GT:GQ:DP        1|1:83:26       1|1:71:23       1|1:100:35
+1      9114419 rs3118602       T       C       .       PASS    AA=C;DP=143;HM2 GT:GQ:DP        1|1:83:26       1|1:71:23       1|1:100:57
+12     63410624        rs561593        T       C       .       PASS    AA=C;DP=120     GT:GQ:DP        1|1:83:26       1|1:74:24       1|1:100:67
+13     32467757        rs550600        C       T       .       PASS    AA=T;DP=124     GT:GQ:DP        1|1:83:26       1|1:74:24       1|1:100:73
+7      21442657        rs2282888       G       A       .       PASS    AA=g;DP=118     GT:GQ:DP        1|1:83:26       1|1:74:28       1|1:100:61
+8      18242682        rs6586736       G       A       .       PASS    AA=.;DP=96      GT:GQ:DP        1|1:83:26       1|1:77:24       1|1:100:45
+6      7946316 rs9328449       C       T       .       PASS    AA=C;DP=105     GT:GQ:DP        1|1:83:26       1|1:77:24       1|1:100:54
+16     64610659        rs11645433      T       C       .       PASS    AA=T;DP=113     GT:GQ:DP        1|1:83:26       1|1:77:24       1|1:100:64
+21     20714482        rs7280449       C       G       .       PASS    AA=C;DP=117     GT:GQ:DP        1|1:83:26       1|1:77:24       1|1:100:65
+6      51260973        rs730450        C       G       .       PASS    AA=C;DP=122     GT:GQ:DP        1|1:83:26       1|1:77:24       1|1:100:74
+5      174584389       rs1122550       A       C       .       PASS    AA=C;DP=112     GT:GQ:DP        1|1:83:26       1|1:77:25       1|1:100:62
+2      158344130       rs3768794       C       T       .       PASS    AA=T;DP=121     GT:GQ:DP        1|1:83:26       1|1:80:25       1|1:100:29
+20     32370750        rs819130        T       C       .       PASS    AA=C;DP=96      GT:GQ:DP        1|1:83:26       1|1:80:25       1|1:100:37
+2      114339961       rs924804        A       G       .       PASS    AA=G;DP=108     GT:GQ:DP        1|1:83:26       1|1:80:25       1|1:100:57
+6      55926914        rs4341007       T       C       .       PASS    AA=C;DP=101     GT:GQ:DP        1|1:83:26       1|1:80:26       1|1:100:50
+11     32498360        rs10734411      G       A       .       PASS    AA=A;DP=106     GT:GQ:DP        1|1:83:26       1|1:80:26       1|1:100:57
+2      215559893       rs10755029      G       A       .       PASS    AA=A;DP=113     GT:GQ:DP        1|1:83:26       1|1:80:26       1|1:100:58
+5      160755699       rs3111046       C       T       .       PASS    AA=T;DP=118     GT:GQ:DP        1|1:83:26       1|1:80:26       1|1:100:63
+13     110830319       rs2770258       G       C       .       PASS    AA=G;DP=106     GT:GQ:DP        1|1:83:26       1|1:80:27       1|1:100:38
+4      163149925       rs1483553       T       C       .       PASS    AA=C;DP=121     GT:GQ:DP        1|1:83:26       1|1:80:27       1|1:100:62
+5      157986238       rs824889        A       T       .       PASS    AA=T;DP=153     GT:GQ:DP        1|1:83:26       1|1:82:35       1|1:100:92
+11     106791210       rs588921        T       C       .       PASS    AA=C;DP=138     GT:GQ:DP        1|1:83:26       1|1:83:26       1|1:100:46
+1      92022405        rs6683840       A       G       .       PASS    AA=G;DP=112;HM2;HM3     GT:GQ:DP        1|1:83:26       1|1:83:26       1|1:100:64
+11     7138151 rs2346323       A       G       .       PASS    AA=a;DP=116     GT:GQ:DP        1|1:83:26       1|1:83:26       1|1:100:64
+18     64083057        rs637167        C       G       .       PASS    AA=c;DP=120     GT:GQ:DP        1|1:83:26       1|1:83:26       1|1:100:67
+21     46086818        rs2330247       G       A       .       PASS    AA=A;DP=117     GT:GQ:DP        1|1:83:26       1|1:83:27       1|1:100:65
+1      160749746       rs6668449       A       G       .       PASS    AA=A;DP=119     GT:GQ:DP        1|1:83:26       1|1:83:27       1|1:100:68
+10     105601668       rs7098074       T       C       .       PASS    AA=C;DP=128     GT:GQ:DP        1|1:83:26       1|1:83:27       1|1:100:77
+5      83315546        rs62364167      A       T       .       PASS    AA=T;DP=133     GT:GQ:DP        1|1:83:26       1|1:83:27       1|1:100:79
+4      145927609       rs10031912      A       G       .       PASS    AA=A;DP=99      GT:GQ:DP        1|1:83:26       1|1:83:28       1|1:100:45
+12     10294888        rs11053712      C       G       .       PASS    AA=C;DP=122     GT:GQ:DP        1|1:83:26       1|1:86:27       1|1:100:70
+17     74054837        rs4969201       T       C       .       PASS    AA=t;DP=125     GT:GQ:DP        1|1:83:26       1|1:86:27       1|1:100:76
+7      48841465        rs6945430       T       C       .       PASS    AA=N;DP=119     GT:GQ:DP        1|1:83:26       1|1:89:28       1|1:100:29
+4      107019566       rs2553433       A       C       .       PASS    AA=C;DP=120     GT:GQ:DP        1|1:83:26       1|1:89:28       1|1:100:58
+12     55713240        rs697223        A       C       .       PASS    AA=C;DP=122     GT:GQ:DP        1|1:83:26       1|1:89:28       1|1:100:69
+6      112767740       rs9384824       A       T       .       PASS    AA=T;DP=124     GT:GQ:DP        1|1:83:26       1|1:95:30       1|1:100:48
+12     22845482        rs10842069      G       A       .       PASS    AA=A;DP=112     GT:GQ:DP        1|1:83:26       1|1:95:31       1|1:100:54
+1      30801894        rs2101966       G       A       .       PASS    AA=G;DP=125;HM2;HM3     GT:GQ:DP        1|1:83:26       1|1:95:31       1|1:100:67
+1      33489954        rs4653346       T       A       .       PASS    AA=.;DP=137;HM2;HM3     GT:GQ:DP        1|1:83:26       1|1:95:31       1|1:100:83
+10     10485124        rs2796020       G       C       .       PASS    AA=C;DP=121     GT:GQ:DP        1|1:83:26       1|1:98:31       1|1:100:64
+4      167069307       rs7656913       G       C       .       PASS    AA=C;DP=132     GT:GQ:DP        1|1:83:26       1|1:98:33       1|1:100:75
+6      110351082       rs9400346       G       A       .       PASS    AA=A;DP=132     GT:GQ:DP        1|1:83:26       1|1:99:37       1|1:100:72
+3      130622010       rs4429625       A       G       .       PASS    AA=a;DP=158     GT:GQ:DP        1|1:83:27       1|1:100:38      1|1:100:96
+3      99414874        rs2088408       C       T       .       PASS    AA=T;DP=99      GT:GQ:DP        1|1:83:27       1|1:23:11       1|1:100:55
+5      85978852        rs6889430       T       C       .       PASS    AA=C;DP=97      GT:GQ:DP        1|1:83:27       1|1:24:18       1|1:100:50
+4      9498092 rs4697904       C       T       .       PASS    AA=T;DP=108     GT:GQ:DP        1|1:83:27       1|1:26:12       1|1:100:71
+9      4016743 rs625351        C       T       .       PASS    AA=T;DP=81      GT:GQ:DP        1|1:83:27       1|1:29:13       1|1:100:41
+13     83241691        rs1591012       G       T       .       PASS    AA=T;DP=102     GT:GQ:DP        1|1:83:27       1|1:29:20       1|1:100:54
+16     6563912 rs4786887       C       T       .       PASS    AA=T;DP=111     GT:GQ:DP        1|1:83:27       1|1:29:8        1|1:100:65
+1      224199813       rs12567618      A       G       .       PASS    AA=G;DP=141;HM2 GT:GQ:DP        1|1:83:27       1|1:30:23       1|1:100:50
+3      14154705        rs2607766       T       C       .       PASS    AA=C;DP=116     GT:GQ:DP        1|1:83:27       1|1:35:10       1|1:100:78
+14     26591012        rs6575383       A       G       .       PASS    AA=G;DP=106     GT:GQ:DP        1|1:83:27       1|1:38:12       1|1:100:68
+22     48076993        rs2243690       G       A       .       PASS    AA=A;DP=107     GT:GQ:DP        1|1:83:27       1|1:39:17       1|1:100:52
+5      103870627       rs12186445      T       C       .       PASS    AA=C;DP=111     GT:GQ:DP        1|1:83:27       1|1:44:13       1|1:100:69
+1      67257058        rs2755244       T       C       .       PASS    AA=C;DP=116;HM2;HM3     GT:GQ:DP        1|1:83:27       1|1:44:15       1|1:100:74
+6      147878908       rs1789696       T       C       .       PASS    AA=C;DP=100     GT:GQ:DP        1|1:83:27       1|1:44:20       1|1:100:53
+10     79073940        rs2619636       C       T       .       PASS    AA=C;DP=108     GT:GQ:DP        1|1:83:27       1|1:47:14       1|1:100:68
+22     25324275        rs2105917       C       T       .       PASS    AA=T;DP=108     GT:GQ:DP        1|1:83:27       1|1:47:14       1|1:100:69
+10     131086393       rs1711676       A       C       .       PASS    AA=C;DP=96      GT:GQ:DP        1|1:83:27       1|1:47:15       1|1:100:57
+21     29480084        rs9978220       G       A       .       PASS    AA=A;DP=134     GT:GQ:DP        1|1:83:27       1|1:47:16       1|1:100:89
+16     86553956        rs7498885       A       C       .       PASS    AA=A;DP=118     GT:GQ:DP        1|1:83:27       1|1:49:26       1|1:100:64
+13     96378784        rs6491319       G       A       .       PASS    AA=G;DP=124     GT:GQ:DP        1|1:83:27       1|1:49:26       1|1:100:71
+10     1925995 rs11250890      A       G       .       PASS    AA=A;DP=100     GT:GQ:DP        1|1:83:27       1|1:50:15       1|1:100:58
+7      49475021        rs2526962       A       G       .       PASS    AA=G;DP=110     GT:GQ:DP        1|1:83:27       1|1:51:21       1|1:100:65
+5      147279757       rs1432978       A       T       .       PASS    AA=T;DP=76      GT:GQ:DP        1|1:83:27       1|1:53:16       1|1:100:23
+13     88944854        rs683673        C       T       .       PASS    AA=T;DP=83      GT:GQ:DP        1|1:83:27       1|1:53:16       1|1:100:40
+8      116590742       rs10093834      T       A       .       PASS    AA=A;DP=93      GT:GQ:DP        1|1:83:27       1|1:53:17       1|1:100:50
+20     17170566        rs1609658       A       G       .       PASS    AA=G;DP=106     GT:GQ:DP        1|1:83:27       1|1:53:18       1|1:100:60
+20     40592085        rs6030305       G       C       .       PASS    AA=C;DP=117     GT:GQ:DP        1|1:83:27       1|1:53:22       1|1:100:68
+21     37432132        rs35199609      T       C       .       PASS    AA=C;DP=107     GT:GQ:DP        1|1:83:27       1|1:56:17       1|1:100:65
+2      46309103        rs8179782       T       C       .       PASS    AA=C;DP=102     GT:GQ:DP        1|1:83:27       1|1:56:18       1|1:100:56
+8      109331746       rs7015513       A       C       .       PASS    AA=C;DP=108     GT:GQ:DP        1|1:83:27       1|1:57:19       1|1:100:63
+4      185302030       rs6827836       T       C       .       PASS    AA=t;DP=100     GT:GQ:DP        1|1:83:27       1|1:59:18       1|1:100:56
+9      27401006        rs4879473       C       T       .       PASS    AA=T;DP=110     GT:GQ:DP        1|1:83:27       1|1:59:18       1|1:100:62
+15     25122055        rs6606897       A       C       .       PASS    AA=C;DP=106     GT:GQ:DP        1|1:83:27       1|1:59:18       1|1:100:63
+3      95784321        rs6800316       G       A       .       PASS    AA=G;DP=106     GT:GQ:DP        1|1:83:27       1|1:59:18       1|1:100:64
+15     69865817        rs7180325       A       G       .       PASS    AA=G;DP=111     GT:GQ:DP        1|1:83:27       1|1:59:19       1|1:100:62
+18     74449408        rs4798962       A       G       .       PASS    AA=G;DP=118     GT:GQ:DP        1|1:83:27       1|1:62:19       1|1:100:70
+22     42854597        rs133913        C       T       .       PASS    AA=T;DP=128     GT:GQ:DP        1|1:83:27       1|1:62:19       1|1:100:74
+2      15608477        rs7568459       C       T       .       PASS    AA=T;DP=115     GT:GQ:DP        1|1:83:27       1|1:62:20       1|1:100:71
+5      122674098       rs658488        A       G       .       PASS    AA=G;DP=107     GT:GQ:DP        1|1:83:27       1|1:62:21       1|1:100:57
+15     25623922        rs3110483       T       C       .       PASS    AA=C;DP=125     GT:GQ:DP        1|1:83:27       1|1:62:21       1|1:100:81
+2      146122125       rs10173371      G       A       .       PASS    AA=A;DP=119     GT:GQ:DP        1|1:83:27       1|1:62:26       1|1:100:68
+3      186661256       rs57425527      T       C       .       PASS    AA=C;DP=97      GT:GQ:DP        1|1:83:27       1|1:65:20       1|1:100:34
+9      118369342       rs1467553       A       C       .       PASS    AA=C;DP=150     GT:GQ:DP        1|1:83:27       1|1:65:21       1|1:100:62
+3      126495759       rs9818938       A       G       .       PASS    AA=G;DP=117     GT:GQ:DP        1|1:83:27       1|1:65:22       1|1:100:72
+6      31420023        rs2508003       G       A       .       PASS    AA=a;DP=108     GT:GQ:DP        1|1:83:27       1|1:68:21       1|1:100:43
+22     34460473        rs879680        T       C       .       PASS    AA=C;DP=110     GT:GQ:DP        1|1:83:27       1|1:68:21       1|1:100:51
+11     32419681        rs7103000       C       T       .       PASS    AA=T;DP=122     GT:GQ:DP        1|1:83:27       1|1:68:21       1|1:100:73
+10     86175634        rs1336202       T       G       .       PASS    AA=G;DP=124     GT:GQ:DP        1|1:83:27       1|1:68:21       1|1:100:74
+12     22254175        rs4762892       T       C       .       PASS    AA=C;DP=95      GT:GQ:DP        1|1:83:27       1|1:71:22       1|1:100:44
+8      126165050       rs12682006      C       A       .       PASS    AA=A;DP=108     GT:GQ:DP        1|1:83:27       1|1:71:22       1|1:100:60
+16     58373692        rs8062258       C       T       .       PASS    AA=T;DP=90      GT:GQ:DP        1|1:83:27       1|1:71:24       1|1:100:39
+19     41834571        rs3108542       C       G       .       PASS    AA=C;DP=108     GT:GQ:DP        1|1:83:27       1|1:72:24       1|1:100:59
+5      45074395        rs9292916       A       G       .       PASS    AA=G;DP=133     GT:GQ:DP        1|1:83:27       1|1:74:23       1|1:100:35
+12     64036908        rs12322675      A       G       .       PASS    AA=G;DP=101     GT:GQ:DP        1|1:83:27       1|1:74:24       1|1:100:49
+4      135167863       rs11939044      T       C       .       PASS    AA=T;DP=104     GT:GQ:DP        1|1:83:27       1|1:74:24       1|1:100:51
+4      74688385        rs1247656       G       C       .       PASS    AA=C;DP=121     GT:GQ:DP        1|1:83:27       1|1:74:24       1|1:100:71
+1      246115610       rs7514184       C       T       .       PASS    AA=C;DP=113;HM2;HM3     GT:GQ:DP        1|1:83:27       1|1:77:24       1|1:100:63
+1      202406807       rs16853059      C       T       .       PASS    AA=T;DP=117;HM2;HM3     GT:GQ:DP        1|1:83:27       1|1:77:24       1|1:100:68
+9      87203818        rs2593016       T       G       .       PASS    AA=G;DP=114     GT:GQ:DP        1|1:83:27       1|1:80:35       1|1:100:52
+11     40067335        rs1462177       A       G       .       PASS    AA=G;DP=119     GT:GQ:DP        1|1:83:27       1|1:83:26       1|1:100:66
+2      61958964        rs10167021      A       T       .       PASS    AA=T;DP=118     GT:GQ:DP        1|1:83:27       1|1:83:27       1|1:100:65
+6      7620369 rs737052        C       G       .       PASS    AA=G;DP=137     GT:GQ:DP        1|1:83:27       1|1:83:27       1|1:100:80
+1      231959270       rs1389966       G       C       .       PASS    AA=C;DP=108;HM3 GT:GQ:DP        1|1:83:27       1|1:86:29       1|1:100:50
+7      89230471        rs7804533       T       C       .       PASS    AA=C;DP=128     GT:GQ:DP        1|1:83:27       1|1:92:29       1|1:100:71
+14     66009936        rs9944086       G       A       .       PASS    AA=G;DP=128     GT:GQ:DP        1|1:83:27       1|1:95:30       1|1:100:74
+11     11975957        rs7116052       A       G       .       PASS    AA=G;DP=146     GT:GQ:DP        1|1:83:28       1|1:25:17       1|1:100:60
+12     116246027       rs1843019       T       C       .       PASS    AA=T;DP=102     GT:GQ:DP        1|1:83:28       1|1:26:17       1|1:100:57
+1      1109520 rs4560982       G       C       .       PASS    AA=c;DP=98      GT:GQ:DP        1|1:83:28       1|1:32:10       1|1:100:53
+17     17404524        rs8082417       C       G       .       PASS    AA=G;DP=98      GT:GQ:DP        1|1:83:28       1|1:38:11       1|1:100:59
+2      11645439        rs4669752       G       C       .       PASS    AA=C;DP=124     GT:GQ:DP        1|1:83:28       1|1:40:16       1|1:100:39
+5      11805600        rs4702818       A       G       .       PASS    AA=a;DP=90      GT:GQ:DP        1|1:83:28       1|1:47:14       1|1:100:35
+16     11717883        rs1592572       T       C       .       PASS    AA=C;DP=113     GT:GQ:DP        1|1:83:28       1|1:53:17       1|1:100:70
+8      141228971       rs28491566      A       G       .       PASS    AA=G;DP=102     GT:GQ:DP        1|1:83:28       1|1:56:18       1|1:100:55
+7      101850532       rs7384395       G       C       .       PASS    AA=C;DP=130     GT:GQ:DP        1|1:83:28       1|1:62:19       1|1:100:83
+3      67403960        rs1490239       C       G       .       PASS    AA=G;DP=117     GT:GQ:DP        1|1:83:28       1|1:62:20       1|1:100:67
+1      84069193        rs979757        T       C       .       PASS    AA=C;DP=110;HM2 GT:GQ:DP        1|1:83:28       1|1:65:20       1|1:100:49
+3      177552626       rs2128987       G       A       .       PASS    AA=A;DP=91      GT:GQ:DP        1|1:83:28       1|1:66:26       1|1:100:30
+17     33068922        rs9906814       A       G       .       PASS    AA=G;DP=105     GT:GQ:DP        1|1:83:28       1|1:68:21       1|1:100:58
+9      13889200        rs7874645       C       G       .       PASS    AA=G;DP=115     GT:GQ:DP        1|1:83:28       1|1:68:21       1|1:100:65
+18     4569102 rs1595361       T       C       .       PASS    AA=T;DP=122     GT:GQ:DP        1|1:83:28       1|1:68:21       1|1:100:74
+12     72878764        rs1357243       C       T       .       PASS    AA=T;DP=83      GT:GQ:DP        1|1:83:28       1|1:68:22       1|1:100:28
+16     51034768        rs2387576       C       T       .       PASS    AA=c;DP=121     GT:GQ:DP        1|1:83:28       1|1:71:23       1|1:100:72
+18     57555166        rs4941050       A       C       .       PASS    AA=C;DP=136     GT:GQ:DP        1|1:83:28       1|1:73:23       1|1:100:87
+4      187154263       rs830841        T       C       .       PASS    AA=T;DP=128     GT:GQ:DP        1|1:83:28       1|1:74:23       1|1:100:79
+10     90029004        rs7089186       A       G       .       PASS    AA=G;DP=131     GT:GQ:DP        1|1:83:28       1|1:74:23       1|1:100:81
+14     39970432        rs1888594       A       G       .       PASS    AA=G;DP=125     GT:GQ:DP        1|1:83:28       1|1:83:27       1|1:100:73
+5      127492000       rs2617615       A       G       .       PASS    AA=G;DP=97      GT:GQ:DP        1|1:83:28       1|1:86:29       1|1:100:31
+8      121759689       rs4369031       C       G       .       PASS    AA=c;DP=101     GT:GQ:DP        1|1:83:29       0|0:5:15        1|0:100:57
+7      147624609       rs6464868       C       G       .       PASS    AA=G;DP=90      GT:GQ:DP        1|1:83:29       1|1:26:10       1|1:100:52
+21     31833290        rs967481        A       G       .       PASS    AA=G;DP=108     GT:GQ:DP        1|1:83:29       1|1:41:13       1|1:100:67
+16     31034723        rs2052581       G       A       .       PASS    AA=A;DP=98      GT:GQ:DP        1|1:83:29       1|1:50:15       1|1:100:43
+15     44862136        rs1918641       A       G       .       PASS    AA=A;DP=107     GT:GQ:DP        1|1:83:29       1|1:56:17       1|1:100:41
+3      190691338       rs1152859       C       T       .       PASS    AA=T;DP=96      GT:GQ:DP        1|1:83:29       1|1:56:18       1|1:100:36
+18     44178994        rs4264461       A       G       .       PASS    AA=G;DP=123     GT:GQ:DP        1|1:83:29       1|1:59:18       1|1:100:75
+8      33684422        rs2028594       A       G       .       PASS    AA=G;DP=106     GT:GQ:DP        1|1:83:29       1|1:67:27       1|1:100:41
+8      6156351 rs4240612       G       A       .       PASS    AA=A;DP=135     GT:GQ:DP        1|1:83:29       1|1:67:35       1|1:100:73
+9      139918119       rs7865218       G       A       .       PASS    AA=G;DP=116     GT:GQ:DP        1|1:83:30       1|1:50:17       1|1:100:68
+4      77660796        rs9999448       A       G       .       PASS    AA=G;DP=121     GT:GQ:DP        1|1:83:30       1|1:77:27       1|1:100:60
+3      27350734        rs2087760       A       G       .       PASS    AA=G;DP=120     GT:GQ:DP        1|1:83:32       1|0:100:22      1|1:100:67
+4      187584608       rs7691547       G       A       .       PASS    AA=A;DP=115     GT:GQ:DP        1|1:83:33       1|1:56:24       1|1:100:57
+15     39815646        rs2577960       C       A       .       PASS    AA=A;DP=91      GT:GQ:DP        1|1:83:33       1|1:8:12        1|1:72:46
+21     42067749        rs13051449      G       A       .       PASS    AA=A;DP=117     GT:GQ:DP        1|1:83:33       1|1:98:32       1|1:100:52
+14     71497378        rs2238278       A       G       .       PASS    AA=A;DP=138     GT:GQ:DP        1|1:83:34       1|1:74:32       1|1:100:73
+11     36013439        rs262454        T       C       .       PASS    AA=C;DP=124     GT:GQ:DP        1|1:83:37       0|1:52:12       1|0:100:75
+8      295514  rs6981621       A       G       .       PASS    AA=G;DP=89      GT:GQ:DP        1|1:84:28       1|0:100:16      1|1:85:34
+21     15193751        rs9983796       C       A       .       PASS    AA=C;DP=106     GT:GQ:DP        1|1:84:28       1|0:100:18      1|1:100:64
+10     84756619        rs4254018       G       A       .       PASS    AA=A;DP=119     GT:GQ:DP        1|1:84:28       1|0:100:18      1|1:100:65
+16     77080114        rs2738706       T       C       .       PASS    AA=C;DP=113     GT:GQ:DP        1|1:84:28       1|0:100:18      1|1:100:66
+4      188257294       rs1027053       A       T       .       PASS    AA=.;DP=117     GT:GQ:DP        1|1:84:28       1|0:100:18      1|1:100:69
+3      60330439        .       G       T       .       PASS    AA=T;DP=105     GT:GQ:DP        1|1:84:28       1|0:100:18      1|1:96:57
+7      52578111        rs804746        A       G       .       PASS    AA=G;DP=105     GT:GQ:DP        1|1:84:28       1|0:100:19      1|1:100:59
+2      15101618        rs6711002       T       C       .       PASS    AA=T;DP=118     GT:GQ:DP        1|1:84:28       1|0:100:20      1|1:100:70
+6      52009409        rs2435329       G       A       .       PASS    AA=A;DP=113     GT:GQ:DP        1|1:84:28       1|0:100:21      1|1:100:65
+10     87955597        rs4934161       A       G       .       PASS    AA=A;DP=105     GT:GQ:DP        1|1:84:28       1|0:100:22      1|1:100:56
+19     51727165        rs4802315       A       G       .       PASS    AA=G;DP=147     GT:GQ:DP        1|1:84:28       1|0:100:22      1|1:100:88
+13     105097197       rs1933330       G       A       .       PASS    AA=A;DP=95      GT:GQ:DP        1|1:84:28       1|0:100:22      1|1:96:33
+4      185876888       .       A       G       .       PASS    AA=G;DP=116     GT:GQ:DP        1|1:84:28       1|0:100:23      1|1:100:54
+10     20806274        rs5025968       T       C       .       PASS    AA=C;DP=106     GT:GQ:DP        1|1:84:28       1|0:100:23      1|1:100:56
+8      135455269       rs4529495       G       A       .       PASS    AA=g;DP=138     GT:GQ:DP        1|1:84:28       1|0:100:23      1|1:100:85
+6      145376207       rs9399529       A       G       .       PASS    AA=a;DP=130     GT:GQ:DP        1|1:84:28       1|0:100:24      1|1:100:80
+9      20380732        rs7029476       C       T       .       PASS    AA=T;DP=97      GT:GQ:DP        1|1:84:28       1|0:100:24      1|1:76:43
+8      114016594       rs10955640      A       G       .       PASS    AA=G;DP=116     GT:GQ:DP        1|1:84:28       1|0:100:25      1|1:100:63
+2      4811723 rs1446147       T       C       .       PASS    AA=C;DP=118     GT:GQ:DP        1|1:84:28       1|0:100:26      1|1:100:64
+1      15431472        rs6429731       T       G       .       PASS    AA=G;DP=109     GT:GQ:DP        1|1:84:28       1|0:100:27      1|1:100:40
+11     18089853        .       G       A       .       PASS    AA=g;DP=106     GT:GQ:DP        1|1:84:28       1|0:100:27      1|1:100:49
+8      86329977        rs2291786       C       T       .       PASS    AA=T;DP=111     GT:GQ:DP        1|1:84:28       1|0:100:27      1|1:100:54
+2      68590960        rs35878577      C       T       .       PASS    AA=T;DP=113     GT:GQ:DP        1|1:84:28       1|0:100:27      1|1:100:60
+18     66816043        rs12327056      A       G       .       PASS    AA=G;DP=107     GT:GQ:DP        1|1:84:28       1|0:100:28      1|1:100:51
+9      73332522        .       C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        1|1:84:28       1|0:100:28      1|1:100:64
+16     83404315        rs4783071       C       T       .       PASS    AA=C;DP=111     GT:GQ:DP        1|1:84:28       1|0:100:28      1|1:80:41
+8      80678410        rs3863249       T       C       .       PASS    AA=C;DP=115     GT:GQ:DP        1|1:84:28       1|0:100:29      1|1:100:46
+12     130681620       rs10794471      C       T       .       PASS    AA=.;DP=116     GT:GQ:DP        1|1:84:28       1|0:100:29      1|1:100:60
+16     77555114        rs8052880       C       T       .       PASS    AA=T;DP=115     GT:GQ:DP        1|1:84:28       1|0:100:30      1|1:100:57
+2      56271425        rs13035976      A       C       .       PASS    AA=C;DP=125     GT:GQ:DP        1|1:84:28       1|0:100:31      1|1:100:64
+20     24824728        rs6106962       G       A       .       PASS    AA=G;DP=120     GT:GQ:DP        1|1:84:28       1|0:100:32      1|1:100:60
+9      108054006       rs2627741       A       G       .       PASS    AA=G;DP=143     GT:GQ:DP        1|1:84:28       1|0:100:34      1|1:100:81
+11     100498282       rs501732        G       A       .       PASS    AA=A;DP=130     GT:GQ:DP        1|1:84:28       1|0:100:44      1|1:100:59
+19     45416616        rs7247201       C       G       .       PASS    AA=G;DP=117     GT:GQ:DP        1|1:84:28       1|0:45:14       1|1:100:75
+17     27461882        rs8081372       G       A       .       PASS    AA=A;DP=139     GT:GQ:DP        1|1:84:28       1|0:59:23       1|1:100:47
+3      191239050       rs1620731       T       C       .       PASS    AA=C;DP=110     GT:GQ:DP        1|1:84:28       1|0:66:17       1|1:100:65
+7      152543059       rs6967048       G       T       .       PASS    AA=T;DP=93      GT:GQ:DP        1|1:84:28       1|0:69:15       1|1:100:50
+2      104799268       rs1868919       A       G       .       PASS    AA=G;DP=123     GT:GQ:DP        1|1:84:28       1|0:70:26       1|1:100:70
+15     44021643        rs2141228       C       G       .       PASS    AA=G;DP=123     GT:GQ:DP        1|1:84:28       1|0:71:27       1|1:100:69
+3      64054970        rs153733        C       T       .       PASS    AA=c;DP=106     GT:GQ:DP        1|1:84:28       1|0:81:20       1|1:100:57
+1      27890628        rs2491357       C       T       .       PASS    AA=T;DP=92;HM2  GT:GQ:DP        1|1:84:28       1|0:82:16       1|1:100:48
+17     47910217        rs2874119       C       T       .       PASS    AA=T;DP=121     GT:GQ:DP        1|1:84:28       1|0:82:23       1|1:100:71
+3      129982936       rs6785115       T       C       .       PASS    AA=C;DP=110     GT:GQ:DP        1|1:84:28       1|0:88:26       1|1:87:53
+9      134122860       rs7031969       A       C       .       PASS    AA=a;DP=118     GT:GQ:DP        1|1:84:28       1|0:95:14       1|1:100:71
+22     45839034        rs6519929       T       C       .       PASS    AA=C;DP=117     GT:GQ:DP        1|1:84:28       1|0:99:15       1|1:100:73
+12     49077760        rs10876033      T       C       .       PASS    AA=N;DP=122     GT:GQ:DP        1|1:84:29       0|1:100:18      1|0:100:77
+7      51651702        rs1024672       C       G       .       PASS    AA=G;DP=123     GT:GQ:DP        1|1:84:29       0|1:100:18      1|0:100:80
+19     58725118        rs3859495       A       G       .       PASS    AA=G;DP=121     GT:GQ:DP        1|1:84:29       0|1:100:20      1|0:100:71
+11     125205640       rs11220235      C       A       .       PASS    AA=C;DP=116     GT:GQ:DP        1|1:84:29       0|1:100:21      1|0:100:69
+9      102103974       rs10989049      A       G       .       PASS    AA=G;DP=122     GT:GQ:DP        1|1:84:29       0|1:100:21      1|0:100:69
+6      89129485        rs61138181      T       C       .       PASS    AA=T;DP=128     GT:GQ:DP        1|1:84:29       0|1:100:21      1|0:100:80
+3      64406591        rs4688195       C       T       .       PASS    AA=T;DP=123     GT:GQ:DP        1|1:84:29       0|1:100:23      1|0:100:71
+10     25893675        rs1414043       T       C       .       PASS    AA=C;DP=126     GT:GQ:DP        1|1:84:29       0|1:100:23      1|0:100:73
+17     32709385        rs2255527       T       C       .       PASS    AA=C;DP=137     GT:GQ:DP        1|1:84:29       0|1:100:25      1|0:100:81
+12     91913061        rs6538370       A       G       .       PASS    AA=A;DP=127     GT:GQ:DP        1|1:84:29       0|1:100:28      1|0:100:70
+21     14528942        rs994764        A       G       .       PASS    AA=G;DP=135     GT:GQ:DP        1|1:84:29       0|1:100:28      1|0:100:78
+2      170585735       rs6728814       G       C       .       PASS    AA=C;DP=141     GT:GQ:DP        1|1:84:29       0|1:16:18       1|0:100:41
+11     8157501 rs7103334       A       G       .       PASS    AA=A;DP=109     GT:GQ:DP        1|1:84:29       0|1:17:19       1|0:100:62
+3      127420976       rs9871359       T       G       .       PASS    AA=G;DP=96      GT:GQ:DP        1|1:84:29       0|1:27:13       1|0:100:56
+2      98223433        rs11891512      C       T       .       PASS    AA=T;DP=123     GT:GQ:DP        1|1:84:29       0|1:46:18       1|0:100:32
+20     12160956        rs2327569       T       C       .       PASS    AA=C;DP=122     GT:GQ:DP        1|1:84:29       0|1:57:21       1|0:100:69
+10     95218105        rs1880262       A       G       .       PASS    AA=a;DP=111     GT:GQ:DP        1|1:84:29       0|1:58:21       1|0:100:60
+20     24263092        rs6049604       A       G       .       PASS    AA=G;DP=109     GT:GQ:DP        1|1:84:29       0|1:65:21       1|0:100:57
+4      71052990        rs708236        G       A       .       PASS    AA=A;DP=98      GT:GQ:DP        1|1:84:29       0|1:80:21       1|0:100:48
+7      7027153 rs4529352       A       G       .       PASS    AA=a;DP=108     GT:GQ:DP        1|1:84:29       0|1:80:22       1|0:100:59
+3      179130422       rs11919677      A       G       .       PASS    AA=G;DP=119     GT:GQ:DP        1|1:84:29       0|1:85:19       1|0:100:71
+12     54261522        rs7137741       A       T       .       PASS    AA=N;DP=120     GT:GQ:DP        1|1:84:29       0|1:87:19       1|0:100:71
+9      16354351        rs7019169       C       A       .       PASS    AA=A;DP=153     GT:GQ:DP        1|1:84:29       0|1:90:21       1|0:100:48
+16     16030549        rs875740        C       A       .       PASS    AA=.;DP=128     GT:GQ:DP        1|1:84:29       0|1:95:19       1|0:100:82
+12     74305878        rs7136963       T       C       .       PASS    AA=C;DP=94      GT:GQ:DP        1|1:84:29       1|0:100:17      1|1:84:47
+20     30683468        rs464063        T       C       .       PASS    AA=T;DP=104     GT:GQ:DP        1|1:84:29       1|0:100:18      1|1:100:49
+14     94204671        rs7151292       G       A       .       PASS    AA=G;DP=89      GT:GQ:DP        1|1:84:29       1|0:100:21      1|1:81:27
+11     101513175       rs4329661       T       C       .       PASS    AA=C;DP=99      GT:GQ:DP        1|1:84:29       1|0:100:22      1|1:100:36
+15     65172387        .       T       C       .       PASS    AA=C;DP=118     GT:GQ:DP        1|1:84:29       1|0:100:22      1|1:100:67
+14     23842762        rs4982895       C       T       .       PASS    AA=T;DP=124     GT:GQ:DP        1|1:84:29       1|0:100:23      1|1:100:74
+9      14679191        rs10756603      T       C       .       PASS    AA=C;DP=114     GT:GQ:DP        1|1:84:29       1|0:100:24      1|1:100:59
+17     29851899        rs172482        C       G       .       PASS    AA=C;DP=146     GT:GQ:DP        1|1:84:29       1|0:100:26      1|1:100:48
+18     54812338        rs1877054       T       A       .       PASS    AA=A;DP=114     GT:GQ:DP        1|1:84:29       1|0:100:28      1|1:100:57
+14     21311764        rs4982505       T       C       .       PASS    AA=C;DP=143     GT:GQ:DP        1|1:84:29       1|0:100:30      1|1:100:83
+17     14661603        rs8065169       A       G       .       PASS    AA=A;DP=117     GT:GQ:DP        1|1:84:29       1|0:100:31      1|1:100:54
+18     69548348        rs17088258      C       T       .       PASS    AA=C;DP=134     GT:GQ:DP        1|1:84:29       1|0:100:32      1|1:100:81
+2      64808442        rs1477042       G       C       .       PASS    AA=G;DP=140     GT:GQ:DP        1|1:84:29       1|0:100:36      1|1:100:66
+13     110380997       rs9521996       C       T       .       PASS    AA=N;DP=128     GT:GQ:DP        1|1:84:29       1|0:15:17       1|1:100:80
+9      13520295        rs933035        T       G       .       PASS    AA=G;DP=108     GT:GQ:DP        1|1:84:29       1|0:36:17       1|1:100:63
+18     73023575        rs4447511       A       T       .       PASS    AA=A;DP=103     GT:GQ:DP        1|1:84:29       1|0:89:17       1|1:100:56
+22     37899421        rs6001470       A       G       .       PASS    AA=G;DP=109     GT:GQ:DP        1|1:84:29       1|1:47:14       1|1:100:66
+11     125265631       rs481056        A       G       .       PASS    AA=G;DP=108     GT:GQ:DP        1|1:84:30       0|1:100:18      1|0:100:62
+12     61888777        rs7315604       G       A       .       PASS    AA=A;DP=139     GT:GQ:DP        1|1:84:30       0|1:100:21      1|0:100:81
+10     26230528        rs10828903      C       T       .       PASS    AA=C;DP=133     GT:GQ:DP        1|1:84:30       0|1:100:25      1|0:100:71
+16     49957202        .       T       C       .       PASS    AA=T;DP=140     GT:GQ:DP        1|1:84:30       0|1:100:26      1|0:100:40
+1      227231427       rs567911        C       T       .       PASS    AA=c;DP=136;HM2;HM3     GT:GQ:DP        1|1:84:30       0|1:100:26      1|0:100:83
+17     65050823        rs2072074       G       C       .       PASS    AA=C;DP=123     GT:GQ:DP        1|1:84:30       0|1:100:27      1|0:100:65
+2      237276446       rs2600781       G       C       .       PASS    AA=C;DP=156     GT:GQ:DP        1|1:84:30       0|1:100:29      1|0:100:54
+2      15522960        rs11889160      C       T       .       PASS    AA=C;DP=134     GT:GQ:DP        1|1:84:30       0|1:100:32      1|0:100:72
+1      242620417       rs3123706       C       G       .       PASS    AA=C;DP=151;HM3 GT:GQ:DP        1|1:84:30       0|1:100:32      1|0:100:89
+7      50773359        rs7383871       C       A       .       PASS    AA=A;DP=149     GT:GQ:DP        1|1:84:30       0|1:100:35      1|0:100:43
+13     111929349       rs280818        T       C       .       PASS    AA=t;DP=142     GT:GQ:DP        1|1:84:30       0|1:28:19       1|0:100:95
+13     43103683        rs9562501       A       G       .       PASS    AA=A;DP=122     GT:GQ:DP        1|1:84:30       0|1:41:18       1|0:100:77
+10     116307137       rs1333688       T       C       .       PASS    AA=C;DP=104     GT:GQ:DP        1|1:84:30       0|1:44:16       1|0:100:58
+12     5627056 rs444834        T       G       .       PASS    AA=T;DP=111     GT:GQ:DP        1|1:84:30       0|1:49:18       1|0:100:65
+2      75512512        rs13411244      A       G       .       PASS    AA=a;DP=120     GT:GQ:DP        1|1:84:30       0|1:56:16       1|0:100:72
+2      151190398       rs2341061       G       C       .       PASS    AA=C;DP=131     GT:GQ:DP        1|1:84:30       0|1:60:19       1|0:100:80
+11     21028174        rs4922737       A       G       .       PASS    AA=G;DP=103     GT:GQ:DP        1|1:84:30       0|1:62:20       1|0:100:52
+2      15467341        rs1318980       G       T       .       PASS    AA=T;DP=110     GT:GQ:DP        1|1:84:30       0|1:65:21       1|0:100:58
+21     45003115        rs660385        A       C       .       PASS    AA=C;DP=103     GT:GQ:DP        1|1:84:30       0|1:78:15       1|0:100:60
+2      183207437       rs10205542      T       C       .       PASS    AA=N;DP=111     GT:GQ:DP        1|1:84:30       0|1:92:14       1|0:100:69
+4      135931912       rs4637463       A       G       .       PASS    AA=G;DP=140     GT:GQ:DP        1|1:84:30       0|1:92:25       1|0:100:83
+1      225509855       rs2718210       T       C       .       PASS    AA=T;DP=93      GT:GQ:DP        1|1:84:30       0|1:93:14       1|0:100:43
+3      109671683       rs9868484       G       A       .       PASS    AA=G;DP=135     GT:GQ:DP        1|1:84:30       0|1:99:22       1|0:100:84
+8      50273946        rs16905547      G       A       .       PASS    AA=.;DP=124     GT:GQ:DP        1|1:84:30       1|0:100:13      1|1:100:84
+6      106439606       rs4407741       A       C       .       PASS    AA=A;DP=131     GT:GQ:DP        1|1:84:30       1|0:100:18      1|1:100:85
+5      144001863       rs165452        C       G       .       PASS    AA=G;DP=120     GT:GQ:DP        1|1:84:30       1|0:100:22      1|1:100:67
+19     23079701        rs6511404       G       A       .       PASS    AA=.;DP=109     GT:GQ:DP        1|1:84:30       1|0:100:23      1|1:100:56
+1      198916056       rs4326655       A       T       .       PASS    AA=T;DP=113;HM2 GT:GQ:DP        1|1:84:30       1|0:100:27      1|1:100:55
+7      101032123       rs6465823       G       T       .       PASS    AA=G;DP=133     GT:GQ:DP        1|1:84:30       1|0:64:12       1|1:100:86
+3      131163346       rs62265628      G       A       .       PASS    AA=G;DP=143     GT:GQ:DP        1|1:84:31       0|1:100:19      1|0:100:48
+5      144210612       rs7730684       T       C       .       PASS    AA=C;DP=132     GT:GQ:DP        1|1:84:31       0|1:33:24       1|0:100:73
+21     46188111        rs13049584      G       C       .       PASS    AA=C;DP=111     GT:GQ:DP        1|1:84:31       0|1:54:17       1|0:100:63
+18     74627137        rs2941838       T       C       .       PASS    AA=C;DP=115     GT:GQ:DP        1|1:84:31       0|1:90:16       1|0:100:69
+8      17119011        rs3213600       C       G       .       PASS    AA=C;DP=97      GT:GQ:DP        1|1:84:31       0|1:98:23       1|0:100:42
+9      75875733        rs3012836       G       C       .       PASS    AA=G;DP=110     GT:GQ:DP        1|1:84:31       1|0:100:29      1|1:100:48
+5      124466935       rs4415071       T       C       .       PASS    AA=C;DP=84      GT:GQ:DP        1|1:84:31       1|1:36:17       1|1:100:38
+9      11006121        rs1831907       T       A       .       PASS    AA=A;DP=108     GT:GQ:DP        1|1:84:32       0|1:22:10       1|0:100:65
+17     59825826        rs7502543       T       C       .       PASS    AA=C;DP=107     GT:GQ:DP        1|1:84:32       0|1:31:25       1|0:100:51
+5      18017064        rs543899        C       T       .       PASS    AA=T;DP=95      GT:GQ:DP        1|1:84:32       0|1:92:15       1|0:100:39
+3      100750666       rs1513306       A       G       .       PASS    AA=G;DP=121     GT:GQ:DP        1|1:84:32       1|0:100:28      1|1:100:61
+16     11381706        rs12935527      A       G       .       PASS    AA=G;DP=92      GT:GQ:DP        1|1:84:32       1|1:29:8        1|1:100:42
+10     123852942       rs2420994       T       C       .       PASS    AA=T;DP=94      GT:GQ:DP        1|1:84:32       1|1:71:25       1|1:100:36
+3      101557449       rs277647        G       C       .       PASS    AA=C;DP=129     GT:GQ:DP        1|1:84:32       1|1:80:26       1|1:100:73
+20     79657   rs1592157       A       G       .       PASS    AA=.;DP=107     GT:GQ:DP        1|1:84:33       0|1:100:21      1|0:100:44
+19     13641730        rs11673242      T       C       .       PASS    AA=C;DP=125     GT:GQ:DP        1|1:84:33       1|1:62:19       1|1:100:72
+7      38895429        rs10254873      C       T       .       PASS    AA=T;DP=87      GT:GQ:DP        1|1:84:33       1|1:68:21       1|1:100:25
+15     67359593        rs905507        T       G       .       PASS    AA=G;DP=105     GT:GQ:DP        1|1:84:33       1|1:77:24       1|1:100:38
+19     56707503        rs2168642       G       A       .       PASS    AA=.;DP=140     GT:GQ:DP        1|1:84:35       0|1:100:25      1|0:100:66
+9      109020776       rs2680209       T       C       .       PASS    AA=C;DP=137     GT:GQ:DP        1|1:84:35       1|1:98:31       1|1:100:67
+10     15172828        rs6602809       T       C       .       PASS    AA=C;DP=115     GT:GQ:DP        1|1:84:36       1|1:53:18       1|1:100:62
+18     59903073        rs2849307       C       A       .       PASS    AA=A;DP=161     GT:GQ:DP        1|1:84:36       1|1:55:28       1|1:100:96
+16     8601198 rs7197009       A       G       .       PASS    AA=G;DP=134     GT:GQ:DP        1|1:84:38       1|1:56:24       1|1:100:72
+8      39989534        rs2981158       C       T       .       PASS    AA=T;DP=129     GT:GQ:DP        1|1:84:38       1|1:62:20       1|1:100:72
+3      196155403       rs823009        A       C       .       PASS    AA=C;DP=135     GT:GQ:DP        1|1:84:38       1|1:74:23       1|1:100:78
+20     11863616        rs761317        C       T       .       PASS    AA=C;DP=138     GT:GQ:DP        1|1:84:38       1|1:74:29       1|1:100:74
+8      119005983       rs958381        T       C       .       PASS    AA=C;DP=151     GT:GQ:DP        1|1:84:38       1|1:82:33       1|1:100:37
+6      86149598        rs545969        C       T       .       PASS    AA=T;DP=130     GT:GQ:DP        1|1:84:38       1|1:83:26       1|1:100:56
+8      128470033       rs16902141      C       A       .       PASS    AA=A;DP=132     GT:GQ:DP        1|1:84:38       1|1:86:28       1|1:100:69
+6      33734020        .       C       T       .       PASS    AA=C;DP=147     GT:GQ:DP        1|1:84:40       1|0:100:22      1|1:100:85
+2      113388950       rs2464912       C       G       .       PASS    AA=G;DP=149     GT:GQ:DP        1|1:84:40       1|0:100:29      1|1:100:64
+20     4709262 rs6052870       T       C       .       PASS    AA=T;DP=147     GT:GQ:DP        1|1:84:41       0|1:100:22      1|0:100:82
+6      7817552 rs3778347       A       G       .       PASS    AA=G;DP=124     GT:GQ:DP        1|1:84:41       0|1:66:16       1|0:100:69
+13     27115690        rs9554085       G       A       .       PASS    AA=A;DP=139     GT:GQ:DP        1|1:84:45       0|0:81:31       1|0:100:61
+8      41050840        rs10097162      T       C       .       PASS    AA=T;DP=105     GT:GQ:DP        1|1:85:27       1|1:9:7 1|1:100:70
+19     50836865        rs2286756       G       T       .       PASS    AA=T;DP=114     GT:GQ:DP        1|1:85:27       1|1:9:7 1|1:100:79
+7      2206095 rs1637738       T       C       .       PASS    AA=C;DP=117     GT:GQ:DP        1|1:85:28       1|1:13:15       1|1:100:74
+4      191003171       rs2685869       A       C       .       PASS    AA=C;DP=95      GT:GQ:DP        1|1:85:28       1|1:37:11       1|1:44:54
+14     74416493        rs28426374      C       T       .       PASS    AA=T;DP=115     GT:GQ:DP        1|1:85:30       0|0:30:11       1|0:100:73
+15     53160742        rs28809294      T       A       .       PASS    AA=T;DP=115     GT:GQ:DP        1|1:85:30       0|0:33:18       1|0:100:67
+6      155617123       rs1331212       C       T       .       PASS    AA=T;DP=96      GT:GQ:DP        1|1:85:30       0|0:39:13       1|0:100:53
+5      1477369 .       G       A       .       PASS    AA=G;DP=123     GT:GQ:DP        1|1:85:30       0|0:39:13       1|0:100:68
+6      150877828       rs4566894       G       A       .       PASS    AA=G;DP=118     GT:GQ:DP        1|1:85:30       0|0:42:15       1|0:100:34
+7      85290980        rs2726010       C       G       .       PASS    AA=G;DP=122     GT:GQ:DP        1|1:85:30       0|0:47:21       1|0:100:71
+8      72366679        .       C       T       .       PASS    AA=T;DP=101     GT:GQ:DP        1|1:85:30       0|0:51:17       1|0:100:52
+6      119669199       rs11153809      C       G       .       PASS    AA=G;DP=137     GT:GQ:DP        1|1:85:30       0|0:51:17       1|0:100:93
+1      221507061       rs61837630      A       G       .       PASS    AA=G;DP=117     GT:GQ:DP        1|1:85:30       0|0:51:18       1|0:100:67
+15     90565432        rs8040211       T       C       .       PASS    AA=C;DP=117     GT:GQ:DP        1|1:85:30       0|0:51:18       1|0:100:68
+4      101587352       .       A       G       .       PASS    AA=A;DP=100     GT:GQ:DP        1|1:85:30       0|0:54:19       1|0:100:52
+1      32529026        rs1741981       T       C       .       PASS    AA=N;DP=123;HM2;HM3     GT:GQ:DP        1|1:85:30       0|0:59:28       1|0:100:65
+5      164086912       .       C       T       .       PASS    AA=C;DP=125     GT:GQ:DP        1|1:85:30       0|0:60:20       1|0:100:78
+4      166442471       rs11723812      G       A       .       PASS    AA=A;DP=114     GT:GQ:DP        1|1:85:30       0|0:60:21       1|0:100:62
+21     33832090        rs4817579       T       C       .       PASS    AA=C;DP=113     GT:GQ:DP        1|1:85:30       0|0:63:22       1|0:100:59
+13     111832290       rs893208        A       G       .       PASS    AA=G;DP=123     GT:GQ:DP        1|1:85:30       0|0:63:31       1|0:100:50
+6      2744059 rs160690        A       C       .       PASS    AA=A;DP=128     GT:GQ:DP        1|1:85:30       0|0:66:22       1|0:100:35
+20     35655890        rs11905226      G       C       .       PASS    AA=G;DP=116     GT:GQ:DP        1|1:85:30       0|0:66:22       1|0:100:62
+9      21232040        rs10964933      C       T       .       PASS    AA=T;DP=125     GT:GQ:DP        1|1:85:30       0|0:66:22       1|0:100:72
+5      51225067        rs4865693       A       G       .       PASS    AA=G;DP=99      GT:GQ:DP        1|1:85:30       0|0:66:23       1|0:100:46
+12     3702875 rs57555399      G       C       .       PASS    AA=G;DP=147     GT:GQ:DP        1|1:85:30       0|0:66:23       1|0:100:51
+15     83944440        rs1551970       G       A       .       PASS    AA=G;DP=127     GT:GQ:DP        1|1:85:30       0|0:66:24       1|0:100:73
+19     33383865        rs1820708       A       G       .       PASS    AA=G;DP=146     GT:GQ:DP        1|1:85:30       0|0:69:23       1|0:100:54
+11     128447563       rs582708        C       T       .       PASS    AA=C;DP=137     GT:GQ:DP        1|1:85:30       0|0:69:30       1|0:100:77
+10     82398307        rs61859360      G       A       .       PASS    AA=A;DP=124     GT:GQ:DP        1|1:85:30       0|0:72:24       1|0:100:72
+3      126831313       rs9870730       T       C       .       PASS    AA=.;DP=106     GT:GQ:DP        1|1:85:30       0|0:75:25       1|0:100:52
+4      172235397       rs28722724      T       C       .       PASS    AA=C;DP=109     GT:GQ:DP        1|1:85:30       0|0:81:27       1|0:100:51
+14     95084004        rs12434457      G       A       .       PASS    AA=A;DP=144     GT:GQ:DP        1|1:85:30       0|0:81:28       1|0:100:84
+14     79961768        rs11623870      A       T       .       PASS    AA=N;DP=123     GT:GQ:DP        1|1:85:30       0|0:84:28       1|0:100:63
+12     29472018        rs7301354       A       G       .       PASS    AA=A;DP=136     GT:GQ:DP        1|1:85:30       0|0:84:29       1|0:100:77
+1      39580045        rs4660669       A       C       .       PASS    AA=A;DP=145;HM2;HM3     GT:GQ:DP        1|1:85:30       0|0:84:30       1|0:100:33
+14     24861679        .       A       G       .       PASS    AA=A;DP=127     GT:GQ:DP        1|1:85:30       0|0:87:30       1|0:100:65
+3      70061156        rs7430957       A       G       .       PASS    AA=G;DP=145     GT:GQ:DP        1|1:85:30       0|0:90:30       1|0:100:83
+1      101373750       rs36106538      A       G       .       PASS    AA=A;DP=126     GT:GQ:DP        1|1:85:30       0|0:90:31       1|0:100:64
+4      94230900        rs9998068       T       C       .       PASS    AA=T;DP=116     GT:GQ:DP        1|1:85:31       0|0:42:15       1|0:100:69
+4      126858643       rs4437271       G       A       .       PASS    AA=g;DP=122     GT:GQ:DP        1|1:85:31       0|0:44:26       1|0:100:66
+5      174202980       rs4551083       C       T       .       PASS    AA=T;DP=128     GT:GQ:DP        1|1:85:31       0|0:48:23       1|0:100:74
+16     7187919 rs7203287       G       C       .       PASS    AA=G;DP=126     GT:GQ:DP        1|1:85:31       0|0:60:20       1|0:100:77
+11     128805084       rs57469160      G       A       .       PASS    AA=G;DP=111     GT:GQ:DP        1|1:85:31       0|0:60:21       1|0:100:58
+2      40181396        rs10183831      C       G       .       PASS    AA=C;DP=119     GT:GQ:DP        1|1:85:31       0|0:63:22       1|0:100:68
+5      120091070       .       C       T       .       PASS    AA=C;DP=135     GT:GQ:DP        1|1:85:31       0|0:66:23       1|0:100:83
+13     102874884       rs9582706       G       C       .       PASS    AA=G;DP=124     GT:GQ:DP        1|1:85:31       0|0:75:27       1|0:100:66
+10     76107543        rs946184        A       G       .       PASS    AA=G;DP=112     GT:GQ:DP        1|1:85:31       0|0:78:26       1|0:100:56
+10     89395295        rs11202489      C       G       .       PASS    AA=C;DP=132     GT:GQ:DP        1|1:85:31       0|0:81:27       1|0:100:77
+2      100983925       rs10189697      C       G       .       PASS    AA=G;DP=149     GT:GQ:DP        1|1:85:31       0|0:81:28       1|0:100:73
+21     37476713        rs2835651       G       T       .       PASS    AA=G;DP=147     GT:GQ:DP        1|1:85:31       0|0:87:29       1|0:100:85
+13     32910310        rs549096        A       G       .       PASS    AA=G;DP=120     GT:GQ:DP        1|1:85:31       0|0:87:31       1|0:100:56
+5      146747686       rs744585        C       G       .       PASS    AA=-;DP=126     GT:GQ:DP        1|1:85:31       0|0:88:36       1|0:100:57
+6      87409566        rs1935604       C       T       .       PASS    AA=.;DP=139     GT:GQ:DP        1|1:85:31       0|0:90:31       1|0:100:81
+10     113246807       .       C       T       .       PASS    AA=C;DP=137     GT:GQ:DP        1|1:85:31       0|0:97:36       1|0:100:67
+2      40033139        rs6736963       C       A       .       PASS    AA=A;DP=136     GT:GQ:DP        1|1:85:31       1|1:76:29       1|1:100:77
+4      54985223        rs28616594      T       A       .       PASS    AA=T;DP=131     GT:GQ:DP        1|1:85:32       0|0:44:26       1|0:100:75
+4      7712631 rs1158072       T       C       .       PASS    AA=T;DP=127     GT:GQ:DP        1|1:85:32       0|0:51:17       1|0:100:79
+8      14350069        rs1551811       G       C       .       PASS    AA=C;DP=117     GT:GQ:DP        1|1:85:32       0|0:51:18       1|0:100:53
+14     24769923        rs17243139      G       A       .       PASS    AA=A;DP=129     GT:GQ:DP        1|1:85:32       0|0:84:29       1|0:100:70
+5      3696193 rs12516143      T       A       .       PASS    AA=T;DP=137     GT:GQ:DP        1|1:85:33       0|0:72:24       1|0:100:80
+12     124029559       rs7960447       A       C       .       PASS    AA=C;DP=141     GT:GQ:DP        1|1:85:33       1|1:43:28       1|1:100:78
+2      72019222        .       C       A       .       PASS    AA=C;DP=121     GT:GQ:DP        1|1:85:33       1|1:44:14       1|1:100:73
+10     81680275        rs1923541       C       A       .       PASS    AA=c;DP=125     GT:GQ:DP        1|1:85:33       1|1:56:22       1|1:100:65
+6      8115635 rs651971        A       C       .       PASS    AA=C;DP=120     GT:GQ:DP        1|1:85:33       1|1:62:19       1|1:100:68
+13     23140023        rs3794342       A       G       .       PASS    AA=G;DP=136     GT:GQ:DP        1|1:85:34       1|1:44:14       1|1:100:49
+10     54877722        rs430793        A       G       .       PASS    AA=G;DP=135     GT:GQ:DP        1|1:85:34       1|1:60:30       1|1:100:72
+15     46289953        rs4301964       C       A       .       PASS    AA=A;DP=114     GT:GQ:DP        1|1:85:34       1|1:62:19       1|1:100:63
+10     113122874       rs7895049       G       A       .       PASS    AA=G;DP=134     GT:GQ:DP        1|1:85:35       1|1:68:22       1|1:100:78
+12     1736465 rs9300298       T       A       .       PASS    AA=A;DP=129     GT:GQ:DP        1|1:85:36       0|0:60:21       1|0:100:72
+2      120961375       rs4849883       C       T       .       PASS    AA=C;DP=160     GT:GQ:DP        1|1:85:36       0|1:100:21      1|0:100:93
+10     106296530       .       G       A       .       PASS    AA=G;DP=118     GT:GQ:DP        1|1:85:37       0|0:48:17       1|0:100:65
+6      1483937 rs2816295       C       T       .       PASS    AA=C;DP=149     GT:GQ:DP        1|1:85:37       1|0:58:18       1|1:100:97
+8      135082614       rs1840938       A       C       .       PASS    AA=C;DP=102     GT:GQ:DP        1|1:85:37       1|0:96:17       1|1:100:37
+6      39936840        rs2504098       A       C       .       PASS    AA=C;DP=122     GT:GQ:DP        1|1:85:37       1|0:98:18       1|1:100:67
+17     67088978        rs2367540       T       A       .       PASS    AA=A;DP=109     GT:GQ:DP        1|1:85:37       1|1:65:21       1|1:100:37
+17     6597209 .       G       A       .       PASS    AA=G;DP=109     GT:GQ:DP        1|1:85:42       0|0:69:23       1|0:100:45
+1      150251180       rs2932572       A       C       .       PASS    AA=A;DP=122     GT:GQ:DP        1|1:85:43       1|1:62:19       1|1:100:61
+4      104983398       rs10488855      G       A       .       PASS    AA=a;DP=100     GT:GQ:DP        1|1:86:27       1|1:100:33      1|1:100:29
+5      99197258        rs6888673       C       T       .       PASS    AA=C;DP=121     GT:GQ:DP        1|1:86:27       1|1:100:34      1|1:100:48
+11     80022511        rs11232256      C       T       .       PASS    AA=T;DP=130     GT:GQ:DP        1|1:86:27       1|1:100:40      1|1:100:65
+22     24660370        rs1013815       T       G       .       PASS    AA=G;DP=132     GT:GQ:DP        1|1:86:27       1|1:100:40      1|1:100:66
+5      122299518       rs30045 C       T       .       PASS    AA=T;DP=113     GT:GQ:DP        1|1:86:27       1|1:16:11       1|1:100:76
+22     43867942        rs715623        T       C       .       PASS    AA=T;DP=120     GT:GQ:DP        1|1:86:27       1|1:21:15       1|1:100:80
+20     21775351        rs6047667       G       A       .       PASS    AA=A;DP=82      GT:GQ:DP        1|1:86:27       1|1:23:6        1|1:97:43
+1      151753836       rs6690712       T       A       .       PASS    AA=A;DP=82      GT:GQ:DP        1|1:86:27       1|1:26:7        1|1:100:49
+6      133266179       rs1674714       A       C       .       PASS    AA=C;DP=96      GT:GQ:DP        1|1:86:27       1|1:27:18       1|1:100:51
+2      223512451       rs4674727       T       G       .       PASS    AA=G;DP=121     GT:GQ:DP        1|1:86:27       1|1:27:22       1|1:100:67
+6      44698801        rs542482        T       C       .       PASS    AA=C;DP=99      GT:GQ:DP        1|1:86:27       1|1:30:18       1|1:100:54
+10     90202447        rs1361749       T       C       .       PASS    AA=C;DP=107     GT:GQ:DP        1|1:86:27       1|1:30:19       1|1:100:61
+8      142781713       rs11779816      T       C       .       PASS    AA=.;DP=106     GT:GQ:DP        1|1:86:27       1|1:31:14       1|1:100:58
+3      72848986        rs28607748      A       C       .       PASS    AA=C;DP=100     GT:GQ:DP        1|1:86:27       1|1:35:21       1|1:100:54
+5      82150747        rs6873380       A       G       .       PASS    AA=G;DP=102     GT:GQ:DP        1|1:86:27       1|1:36:16       1|1:100:60
+19     34306957        rs2080623       T       C       .       PASS    AA=C;DP=108     GT:GQ:DP        1|1:86:27       1|1:38:11       1|1:100:68
+6      37691347        rs804819        A       G       .       PASS    AA=G;DP=114     GT:GQ:DP        1|1:86:27       1|1:38:17       1|1:100:72
+2      205273250       rs2335635       A       G       .       PASS    AA=G;DP=90      GT:GQ:DP        1|1:86:27       1|1:38:18       1|1:100:48
+15     60447846        rs290310        T       C       .       PASS    AA=C;DP=77      GT:GQ:DP        1|1:86:27       1|1:39:17       1|1:100:22
+11     13532842        rs10766094      A       G       .       PASS    AA=N;DP=112     GT:GQ:DP        1|1:86:27       1|1:39:18       1|1:100:68
+3      4041782 rs317622        T       C       .       PASS    AA=C;DP=96      GT:GQ:DP        1|1:86:27       1|1:41:13       1|1:100:50
+5      29118636        rs251066        G       A       .       PASS    AA=A;DP=92      GT:GQ:DP        1|1:86:27       1|1:41:13       1|1:100:53
+2      33013861        rs150705        G       A       .       PASS    AA=A;DP=109     GT:GQ:DP        1|1:86:27       1|1:41:14       1|1:100:68
+7      43060672        rs7783165       C       G       .       PASS    AA=G;DP=89      GT:GQ:DP        1|1:86:27       1|1:41:15       1|1:100:36
+7      43745419        rs1181593       A       G       .       PASS    AA=A;DP=99      GT:GQ:DP        1|1:86:27       1|1:41:18       1|1:100:53
+7      147708871       rs1730412       C       T       .       PASS    AA=T;DP=109     GT:GQ:DP        1|1:86:27       1|1:41:19       1|1:100:62
+1      21171950        rs6700718       C       A       .       PASS    AA=A;DP=120;HM2;HM3     GT:GQ:DP        1|1:86:27       1|1:42:21       1|1:100:74
+13     28314177        rs947246        T       C       .       PASS    AA=C;DP=104     GT:GQ:DP        1|1:86:27       1|1:43:18       1|1:100:57
+2      197178818       rs55771791      T       G       .       PASS    AA=G;DP=122     GT:GQ:DP        1|1:86:27       1|1:43:27       1|1:100:69
+20     15046707        rs1322110       G       A       .       PASS    AA=A;DP=91      GT:GQ:DP        1|1:86:27       1|1:44:13       1|1:100:42
+5      61208516        rs10075885      T       G       .       PASS    AA=G;DP=109     GT:GQ:DP        1|1:86:27       1|1:44:13       1|1:100:66
+22     29596777        rs4820909       T       C       .       PASS    AA=C;DP=114     GT:GQ:DP        1|1:86:27       1|1:44:13       1|1:100:75
+9      106422251       rs1425571       A       C       .       PASS    AA=C;DP=118     GT:GQ:DP        1|1:86:27       1|1:46:23       1|1:100:67
+10     3296461 rs4880604       T       C       .       PASS    AA=C;DP=91      GT:GQ:DP        1|1:86:27       1|1:47:14       1|1:100:39
+17     17548042        rs8071107       T       C       .       PASS    AA=t;DP=99      GT:GQ:DP        1|1:86:27       1|1:47:14       1|1:100:46
+3      145161226       rs9841182       G       A       .       PASS    AA=A;DP=89      GT:GQ:DP        1|1:86:27       1|1:47:14       1|1:100:47
+8      29253591        rs583034        A       G       .       PASS    AA=G;DP=85      GT:GQ:DP        1|1:86:27       1|1:47:15       1|1:100:36
+22     38843535        rs6001774       T       C       .       PASS    AA=C;DP=100     GT:GQ:DP        1|1:86:27       1|1:47:15       1|1:100:58
+2      179347743       rs4894049       C       G       .       PASS    AA=G;DP=73      GT:GQ:DP        1|1:86:27       1|1:47:18       1|1:100:23
+10     50631354        rs1720359       C       A       .       PASS    AA=A;DP=108     GT:GQ:DP        1|1:86:27       1|1:47:22       1|1:100:59
+1      150085655       rs9645405       T       G       .       PASS    AA=G;DP=111;HM2 GT:GQ:DP        1|1:86:27       1|1:48:15       1|1:100:67
+11     124411866       rs4561225       G       C       .       PASS    AA=C;DP=116     GT:GQ:DP        1|1:86:27       1|1:49:21       1|1:100:66
+13     109777448       rs7318137       A       C       .       PASS    AA=G;DP=84      GT:GQ:DP        1|1:86:27       1|1:50:15       1|1:100:36
+3      52504813        rs9846089       T       G       .       PASS    AA=G;DP=98      GT:GQ:DP        1|1:86:27       1|1:50:15       1|1:100:48
+10     84959623        rs1010860       G       T       .       PASS    AA=G;DP=93      GT:GQ:DP        1|1:86:27       1|1:50:15       1|1:100:51
+4      119828487       rs9968326       G       A       .       PASS    AA=.;DP=98      GT:GQ:DP        1|1:86:27       1|1:50:15       1|1:100:58
+5      127575709       rs185177        A       G       .       PASS    AA=G;DP=102     GT:GQ:DP        1|1:86:27       1|1:50:15       1|1:100:60
+21     45128783        rs381406        G       T       .       PASS    AA=T;DP=113     GT:GQ:DP        1|1:86:27       1|1:50:15       1|1:100:69
+22     20416373        rs4821217       T       C       .       PASS    AA=C;DP=115     GT:GQ:DP        1|1:86:27       1|1:50:15       1|1:100:77
+7      88057986        rs2718350       T       C       .       PASS    AA=C;DP=73      GT:GQ:DP        1|1:86:27       1|1:50:16       1|1:100:25
+2      138846963       rs4954926       A       G       .       PASS    AA=a;DP=83      GT:GQ:DP        1|1:86:27       1|1:50:16       1|1:100:30
+6      2015705 rs1759300       G       C       .       PASS    AA=G;DP=91      GT:GQ:DP        1|1:86:27       1|1:50:16       1|1:100:50
+16     12590758        rs4281693       G       A       .       PASS    AA=G;DP=111     GT:GQ:DP        1|1:86:27       1|1:50:22       1|1:100:62
+5      115781601       rs33070 T       G       .       PASS    AA=G;DP=104     GT:GQ:DP        1|1:86:27       1|1:50:23       1|1:100:47
+16     6507624 rs17140439      C       T       .       PASS    AA=T;DP=137     GT:GQ:DP        1|1:86:27       1|1:51:28       1|1:100:81
+1      184403203       rs685486        C       G       .       PASS    AA=G;DP=119;HM2 GT:GQ:DP        1|1:86:27       1|1:52:27       1|1:100:62
+4      89328283        rs6532053       A       G       .       PASS    AA=A;DP=114     GT:GQ:DP        1|1:86:27       1|1:53:16       1|1:100:27
+1      96661238        rs2057426       T       C       .       PASS    AA=C;DP=92;HM2;HM3      GT:GQ:DP        1|1:86:27       1|1:53:16       1|1:100:36
+6      158048591       rs12333210      T       C       .       PASS    AA=C;DP=94      GT:GQ:DP        1|1:86:27       1|1:53:16       1|1:100:42
+11     85362583        rs588380        T       C       .       PASS    AA=T;DP=87      GT:GQ:DP        1|1:86:27       1|1:53:16       1|1:100:44
+2      153743971       rs6434428       A       T       .       PASS    AA=T;DP=96      GT:GQ:DP        1|1:86:27       1|1:53:16       1|1:100:54
+11     42513816        rs2862578       G       A       .       PASS    AA=A;DP=105     GT:GQ:DP        1|1:86:27       1|1:53:16       1|1:100:62
+1      199632822       rs2799679       T       C       .       PASS    AA=C;DP=113     GT:GQ:DP        1|1:86:27       1|1:53:16       1|1:100:71
+19     14899095        rs1811200       T       C       .       PASS    AA=N;DP=112     GT:GQ:DP        1|1:86:27       1|1:53:16       1|1:100:71
+12     128172476       rs4964878       C       G       .       PASS    AA=g;DP=118     GT:GQ:DP        1|1:86:27       1|1:53:16       1|1:100:77
+14     103066486       rs2756138       C       G       .       PASS    AA=G;DP=121     GT:GQ:DP        1|1:86:27       1|1:53:16       1|1:100:77
+11     109610291       rs4753881       C       G       .       PASS    AA=G;DP=88      GT:GQ:DP        1|1:86:27       1|1:53:17       1|1:100:45
+8      4501484 rs1351105       T       C       .       PASS    AA=T;DP=139     GT:GQ:DP        1|1:86:27       1|1:55:28       1|1:100:84
+15     60274305        rs1528421       T       C       .       PASS    AA=N;DP=92      GT:GQ:DP        1|1:86:27       1|1:56:17       1|1:100:47
+3      176510497       rs7625843       G       T       .       PASS    AA=T;DP=94      GT:GQ:DP        1|1:86:27       1|1:56:17       1|1:100:49
+8      17763523        rs7004717       G       A       .       PASS    AA=A;DP=95      GT:GQ:DP        1|1:86:27       1|1:56:17       1|1:100:51
+8      19766835        rs11204079      A       G       .       PASS    AA=G;DP=102     GT:GQ:DP        1|1:86:27       1|1:56:17       1|1:100:57
+19     20991019        rs7254768       T       G       .       PASS    AA=G;DP=99      GT:GQ:DP        1|1:86:27       1|1:56:17       1|1:100:58
+4      7892387 rs4580651       T       C       .       PASS    AA=C;DP=107     GT:GQ:DP        1|1:86:27       1|1:56:17       1|1:100:64
+4      182709250       rs4861483       C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        1|1:86:27       1|1:56:17       1|1:100:65
+6      41750130        rs2842648       G       C       .       PASS    AA=C;DP=112     GT:GQ:DP        1|1:86:27       1|1:56:17       1|1:100:69
+7      97949325        rs2697484       A       G       .       PASS    AA=G;DP=120     GT:GQ:DP        1|1:86:27       1|1:56:17       1|1:100:76
+7      111084107       rs2528687       A       G       .       PASS    AA=G;DP=112     GT:GQ:DP        1|1:86:27       1|1:56:18       1|1:100:67
+4      184670725       rs4861558       T       C       .       PASS    AA=C;DP=121     GT:GQ:DP        1|1:86:27       1|1:56:18       1|1:100:79
+20     10189483        rs6039793       G       C       .       PASS    AA=C;DP=92      GT:GQ:DP        1|1:86:27       1|1:56:19       1|1:100:47
+12     111857946       rs3759376       A       G       .       PASS    AA=G;DP=112     GT:GQ:DP        1|1:86:27       1|1:56:19       1|1:100:67
+1      4173822 rs10737404      T       C       .       PASS    AA=C;DP=120;HM2 GT:GQ:DP        1|1:86:27       1|1:56:19       1|1:100:73
+21     34971239        rs1009925       T       C       .       PASS    AA=t;DP=128     GT:GQ:DP        1|1:86:27       1|1:56:19       1|1:100:82
+2      229870939       rs1226974       A       G       .       PASS    AA=G;DP=108     GT:GQ:DP        1|1:86:27       1|1:56:22       1|1:100:59
+3      28238986        rs1588666       T       A       .       PASS    AA=A;DP=91      GT:GQ:DP        1|1:86:27       1|1:59:18       1|1:100:44
+5      133161426       rs6596151       T       C       .       PASS    AA=C;DP=111     GT:GQ:DP        1|1:86:27       1|1:59:18       1|1:100:66
+11     1332605 rs12290175      T       C       .       PASS    AA=N;DP=118     GT:GQ:DP        1|1:86:27       1|1:59:20       1|1:100:69
+3      130148719       rs1683813       T       G       .       PASS    AA=G;DP=93      GT:GQ:DP        1|1:86:27       1|1:62:19       1|1:100:36
+8      71508556        rs2170304       T       C       .       PASS    AA=C;DP=106     GT:GQ:DP        1|1:86:27       1|1:62:19       1|1:100:59
+20     54429501        rs2426625       T       G       .       PASS    AA=G;DP=110     GT:GQ:DP        1|1:86:27       1|1:62:19       1|1:100:67
+3      156916756       rs358722        C       T       .       PASS    AA=T;DP=117     GT:GQ:DP        1|1:86:27       1|1:62:19       1|1:100:71
+8      35901820        rs6468344       C       T       .       PASS    AA=T;DP=127     GT:GQ:DP        1|1:86:27       1|1:62:19       1|1:100:80
+7      62190335        rs2310931       C       A       .       PASS    AA=.;DP=87      GT:GQ:DP        1|1:86:27       1|1:62:20       1|1:100:41
+18     38285486        rs346183        T       C       .       PASS    AA=C;DP=103     GT:GQ:DP        1|1:86:27       1|1:62:20       1|1:100:56
+10     59871075        rs6481390       T       G       .       PASS    AA=G;DP=107     GT:GQ:DP        1|1:86:27       1|1:62:20       1|1:100:60
+4      25177016        rs16877243      C       T       .       PASS    AA=T;DP=122     GT:GQ:DP        1|1:86:27       1|1:62:20       1|1:100:72
+17     47730249        rs2769569       A       G       .       PASS    AA=a;DP=120     GT:GQ:DP        1|1:86:27       1|1:62:21       1|1:100:62
+2      238305224       rs10187840      G       C       .       PASS    AA=C;DP=87      GT:GQ:DP        1|1:86:27       1|1:65:20       1|1:100:30
+1      68598904        rs10889765      C       T       .       PASS    AA=T;DP=97;HM2;HM3      GT:GQ:DP        1|1:86:27       1|1:65:20       1|1:100:51
+3      64982175        rs1517928       G       A       .       PASS    AA=A;DP=108     GT:GQ:DP        1|1:86:27       1|1:65:20       1|1:100:61
+12     21879737        rs2252707       C       A       .       PASS    AA=A;DP=112     GT:GQ:DP        1|1:86:27       1|1:65:20       1|1:100:65
+14     70202512        rs1205233       G       A       .       PASS    AA=A;DP=122     GT:GQ:DP        1|1:86:27       1|1:65:20       1|1:100:73
+7      42039109        rs846332        C       T       .       PASS    AA=T;DP=97      GT:GQ:DP        1|1:86:27       1|1:65:21       1|1:100:43
+3      21587580        rs3860580       G       T       .       PASS    AA=T;DP=98      GT:GQ:DP        1|1:86:27       1|1:65:21       1|1:100:48
+1      234122527       rs6662633       A       G       .       PASS    AA=G;DP=111     GT:GQ:DP        1|1:86:27       1|1:65:21       1|1:100:61
+2      72959155        rs4241253       A       G       .       PASS    AA=G;DP=102     GT:GQ:DP        1|1:86:27       1|1:65:22       1|1:100:48
+11     126392106       rs1616466       C       A       .       PASS    AA=A;DP=118     GT:GQ:DP        1|1:86:27       1|1:65:28       1|1:100:53
+3      67046909        rs7630592       A       G       .       PASS    AA=G;DP=118     GT:GQ:DP        1|1:86:27       1|1:67:25       1|1:100:66
+1      75272847        rs279713        A       G       .       PASS    AA=G;DP=104;HM2;HM3     GT:GQ:DP        1|1:86:27       1|1:68:21       1|1:100:56
+4      59745844        rs7691863       G       A       .       PASS    AA=A;DP=102     GT:GQ:DP        1|1:86:27       1|1:68:21       1|1:100:58
+1      101832079       rs980624        G       A       .       PASS    AA=A;DP=114     GT:GQ:DP        1|1:86:27       1|1:68:21       1|1:100:67
+12     30725075        rs9300199       C       T       .       PASS    AA=T;DP=96      GT:GQ:DP        1|1:86:27       1|1:68:22       1|1:100:45
+8      9954732 rs497643        G       A       .       PASS    AA=A;DP=109     GT:GQ:DP        1|1:86:27       1|1:68:22       1|1:100:61
+15     71141893        rs4776623       C       T       .       PASS    AA=T;DP=116     GT:GQ:DP        1|1:86:27       1|1:68:22       1|1:100:69
+8      91308302        rs7842059       G       C       .       PASS    AA=C;DP=122     GT:GQ:DP        1|1:86:27       1|1:68:22       1|1:100:74
+18     64768478        rs9949988       T       C       .       PASS    AA=t;DP=126     GT:GQ:DP        1|1:86:27       1|1:68:24       1|1:100:32
+9      12509087        rs791675        A       G       .       PASS    AA=a;DP=106     GT:GQ:DP        1|1:86:27       1|1:68:27       1|1:100:37
+15     60046929        rs3784634       C       T       .       PASS    AA=T;DP=87      GT:GQ:DP        1|1:86:27       1|1:71:22       1|1:100:27
+12     33403250        rs4244866       G       C       .       PASS    AA=C;DP=94      GT:GQ:DP        1|1:86:27       1|1:71:22       1|1:100:45
+13     74106302        rs9543731       G       T       .       PASS    AA=G;DP=101     GT:GQ:DP        1|1:86:27       1|1:71:22       1|1:100:50
+7      81455232        rs37093 T       C       .       PASS    AA=C;DP=110     GT:GQ:DP        1|1:86:27       1|1:71:23       1|1:100:61
+9      83636650        rs7873034       A       G       .       PASS    AA=A;DP=96      GT:GQ:DP        1|1:86:27       1|1:71:26       1|1:100:33
+1      240366335       rs2574674       T       C       .       PASS    AA=T;DP=98;HM2;HM3      GT:GQ:DP        1|1:86:27       1|1:72:30       1|1:100:33
+3      118473615       rs6807085       G       A       .       PASS    AA=A;DP=99      GT:GQ:DP        1|1:86:27       1|1:74:23       1|1:100:47
+8      27621602        rs581360        G       A       .       PASS    AA=A;DP=102     GT:GQ:DP        1|1:86:27       1|1:74:23       1|1:100:55
+6      130769657       rs1513541       A       G       .       PASS    AA=G;DP=116     GT:GQ:DP        1|1:86:27       1|1:74:24       1|1:100:67
+8      140029772       rs4281142       T       C       .       PASS    AA=N;DP=119     GT:GQ:DP        1|1:86:27       1|1:74:24       1|1:100:68
+17     29324731        rs902558        T       C       .       PASS    AA=C;DP=121     GT:GQ:DP        1|1:86:27       1|1:74:24       1|1:100:69
+8      134902644       rs1394054       T       C       .       PASS    AA=C;DP=111     GT:GQ:DP        1|1:86:27       1|1:77:24       1|1:100:57
+16     72297963        rs4888636       A       G       .       PASS    AA=G;DP=112     GT:GQ:DP        1|1:86:27       1|1:77:24       1|1:100:61
+20     59235377        rs2426998       A       C       .       PASS    AA=N;DP=126     GT:GQ:DP        1|1:86:27       1|1:77:24       1|1:100:73
+1      111848063       rs1544224       A       G       .       PASS    AA=G;DP=117;HM2;HM3     GT:GQ:DP        1|1:86:27       1|1:77:25       1|1:100:65
+2      66187675        rs1819125       A       G       .       PASS    AA=G;DP=131     GT:GQ:DP        1|1:86:27       1|1:77:25       1|1:100:81
+15     90154242        rs8034779       T       C       .       PASS    AA=t;DP=118     GT:GQ:DP        1|1:86:27       1|1:77:26       1|1:100:66
+12     93430094        rs9668287       C       T       .       PASS    AA=T;DP=106     GT:GQ:DP        1|1:86:27       1|1:78:28       1|1:100:52
+1      244896916       rs3795471       A       G       .       PASS    AA=G;DP=150;HM2;HM3     GT:GQ:DP        1|1:86:27       1|1:78:36       1|1:100:86
+21     21345442        rs8133233       G       C       .       PASS    AA=C;DP=100     GT:GQ:DP        1|1:86:27       1|1:80:25       1|1:100:39
+10     34573494        rs1765162       G       A       .       PASS    AA=A;DP=111     GT:GQ:DP        1|1:86:27       1|1:80:25       1|1:100:57
+15     30782793        rs2178265       A       G       .       PASS    AA=G;DP=108     GT:GQ:DP        1|1:86:27       1|1:80:25       1|1:100:57
+2      81567577        rs10205919      G       A       .       PASS    AA=g;DP=117     GT:GQ:DP        1|1:86:27       1|1:80:25       1|1:100:66
+7      49798533        rs12333649      C       T       .       PASS    AA=T;DP=134     GT:GQ:DP        1|1:86:27       1|1:80:25       1|1:100:85
+1      156967824       rs326006        A       G       .       PASS    AA=G;DP=138     GT:GQ:DP        1|1:86:27       1|1:80:25       1|1:100:88
+15     27022620        rs8024272       T       C       .       PASS    AA=N;DP=120     GT:GQ:DP        1|1:86:27       1|1:80:26       1|1:100:53
+11     9043290 rs6486126       C       T       .       PASS    AA=T;DP=123     GT:GQ:DP        1|1:86:27       1|1:80:26       1|1:100:66
+14     78595284        rs10143998      C       T       .       PASS    AA=C;DP=125     GT:GQ:DP        1|1:86:27       1|1:80:26       1|1:100:73
+2      168882435       rs12612311      A       G       .       PASS    AA=G;DP=130     GT:GQ:DP        1|1:86:27       1|1:80:26       1|1:100:78
+4      73999717        rs28499048      G       A       .       PASS    AA=G;DP=95      GT:GQ:DP        1|1:86:27       1|1:83:26       1|1:100:34
+4      119990363       rs10019751      T       C       .       PASS    AA=T;DP=97      GT:GQ:DP        1|1:86:27       1|1:83:26       1|1:100:43
+1      209006965       rs1340128       G       A       .       PASS    AA=A;DP=117;HM2;HM3     GT:GQ:DP        1|1:86:27       1|1:83:26       1|1:100:64
+5      2411645 rs456732        A       G       .       PASS    AA=G;DP=122     GT:GQ:DP        1|1:86:27       1|1:83:26       1|1:100:70
+16     47879672        rs10852593      G       A       .       PASS    AA=A;DP=100     GT:GQ:DP        1|1:86:27       1|1:86:27       1|1:100:47
+6      36883180        rs236398        T       G       .       PASS    AA=T;DP=170     GT:GQ:DP        1|1:86:27       1|1:86:27       1|1:100:65
+18     59311015        rs1858143       G       A       .       PASS    AA=A;DP=128     GT:GQ:DP        1|1:86:27       1|1:86:27       1|1:100:74
+3      138709746       rs9816201       T       C       .       PASS    AA=T;DP=118     GT:GQ:DP        1|1:86:27       1|1:86:28       1|1:100:49
+11     81275555        rs1540198       C       G       .       PASS    AA=G;DP=93      GT:GQ:DP        1|1:86:27       1|1:86:30       1|1:100:24
+1      24114246        rs9424403       G       A       .       PASS    AA=A;DP=122     GT:GQ:DP        1|1:86:27       1|1:89:28       1|1:100:66
+4      27595487        rs6830557       G       A       .       PASS    AA=A;DP=141     GT:GQ:DP        1|1:86:27       1|1:89:28       1|1:100:90
+12     62203137        rs1603811       C       T       .       PASS    AA=T;DP=123     GT:GQ:DP        1|1:86:27       1|1:89:30       1|1:100:65
+12     82575123        rs10437910      C       T       .       PASS    AA=C;DP=124     GT:GQ:DP        1|1:86:27       1|1:89:30       1|1:100:68
+4      71235977        rs1351419       C       T       .       PASS    AA=T;DP=127     GT:GQ:DP        1|1:86:27       1|1:92:29       1|1:100:73
+9      129100201       rs2779721       A       T       .       PASS    AA=N;DP=107     GT:GQ:DP        1|1:86:27       1|1:92:30       1|1:100:50
+8      121138563       .       G       T       .       PASS    AA=T;DP=120     GT:GQ:DP        1|1:86:27       1|1:92:30       1|1:100:62
+21     22880823        rs8132036       T       G       .       PASS    AA=G;DP=116     GT:GQ:DP        1|1:86:27       1|1:95:30       1|1:100:55
+17     50007384        rs2099927       C       T       .       PASS    AA=T;DP=120     GT:GQ:DP        1|1:86:27       1|1:98:32       1|1:100:61
+6      81484161        rs2789758       C       T       .       PASS    AA=c;DP=136     GT:GQ:DP        1|1:86:27       1|1:98:34       1|1:100:78
+6      95667316        rs9345529       T       C       .       PASS    AA=T;DP=135     GT:GQ:DP        1|1:86:28       1|1:100:36      1|1:100:71
+8      124734756       rs7463896       A       G       .       PASS    AA=A;DP=149     GT:GQ:DP        1|1:86:28       1|1:100:40      1|1:100:77
+13     23498680        rs9511001       G       A       .       PASS    AA=A;DP=90      GT:GQ:DP        1|1:86:28       1|1:16:14       1|1:100:49
+19     23838662        rs7507981       T       G       .       PASS    AA=N;DP=92      GT:GQ:DP        1|1:86:28       1|1:17:11       1|1:100:55
+20     56480091        rs4812001       G       C       .       PASS    AA=C;DP=124     GT:GQ:DP        1|1:86:28       1|1:29:11       1|1:100:87
+11     94772064        rs547531        C       T       .       PASS    AA=T;DP=123     GT:GQ:DP        1|1:86:28       1|1:32:20       1|1:100:76
+11     122735751       rs6589998       A       G       .       PASS    AA=G;DP=88      GT:GQ:DP        1|1:86:28       1|1:32:9        1|1:100:51
+21     24426857        rs1783371       G       A       .       PASS    AA=A;DP=85      GT:GQ:DP        1|1:86:28       1|1:33:18       1|1:100:30
+11     106716367       rs551168        A       C       .       PASS    AA=C;DP=104     GT:GQ:DP        1|1:86:28       1|1:35:17       1|1:100:55
+2      239163606       rs12692231      T       G       .       PASS    AA=G;DP=84      GT:GQ:DP        1|1:86:28       1|1:38:11       1|1:100:33
+12     37371853        rs1719848       A       G       .       PASS    AA=G;DP=90      GT:GQ:DP        1|1:86:28       1|1:38:11       1|1:100:51
+5      42357524        rs4866836       A       G       .       PASS    AA=a;DP=109     GT:GQ:DP        1|1:86:28       1|1:38:11       1|1:100:69
+6      158098992       rs596121        G       C       .       PASS    AA=C;DP=113     GT:GQ:DP        1|1:86:28       1|1:39:22       1|1:100:65
+X      3460567 rs6567558       T       C       .       PASS    AA=C;DP=119     GT:GQ:DP        1|1:86:28       1|1:41:23       1|1:100:36
+11     109532200       rs1784657       A       C       .       PASS    AA=C;DP=105     GT:GQ:DP        1|1:86:28       1|1:41:23       1|1:100:43
+20     47671276        rs235037        A       G       .       PASS    AA=a;DP=121     GT:GQ:DP        1|1:86:28       1|1:44:13       1|1:100:79
+14     67006235        rs1315735       G       A       .       PASS    AA=A;DP=103     GT:GQ:DP        1|1:86:28       1|1:44:15       1|1:100:59
+7      133406051       rs6957345       A       G       .       PASS    AA=G;DP=111     GT:GQ:DP        1|1:86:28       1|1:47:14       1|1:100:73
+18     27396752        rs1791209       G       T       .       PASS    AA=t;DP=102     GT:GQ:DP        1|1:86:28       1|1:47:21       1|1:100:53
+11     8071225 rs6578926       G       C       .       PASS    AA=G;DP=94      GT:GQ:DP        1|1:86:28       1|1:50:15       1|1:100:52
+20     61761452        rs6089953       A       G       .       PASS    AA=G;DP=103     GT:GQ:DP        1|1:86:28       1|1:53:16       1|1:100:59
+19     13337394        rs1871470       T       C       .       PASS    AA=C;DP=87      GT:GQ:DP        1|1:86:28       1|1:53:17       1|1:100:40
+4      161464108       rs4691647       G       A       .       PASS    AA=A;DP=103     GT:GQ:DP        1|1:86:28       1|1:53:17       1|1:100:57
+1      68281583        rs7550608       G       A       .       PASS    AA=A;DP=125;HM2 GT:GQ:DP        1|1:86:28       1|1:53:17       1|1:100:81
+5      149408588       rs216125        C       G       .       PASS    AA=G;DP=99      GT:GQ:DP        1|1:86:28       1|1:56:17       1|1:100:49
+12     39030450        rs7313525       G       A       .       PASS    AA=g;DP=114     GT:GQ:DP        1|1:86:28       1|1:56:17       1|1:100:67
+16     60872606        rs11865810      T       C       .       PASS    AA=C;DP=123     GT:GQ:DP        1|1:86:28       1|1:56:17       1|1:100:79
+5      108732665       rs537264        T       C       .       PASS    AA=t;DP=106     GT:GQ:DP        1|1:86:28       1|1:59:18       1|1:100:58
+1      55743193        rs183065        T       C       .       PASS    AA=C;DP=124;HM2 GT:GQ:DP        1|1:86:28       1|1:59:19       1|1:100:75
+6      18935284        rs1538279       C       T       .       PASS    AA=T;DP=125     GT:GQ:DP        1|1:86:28       1|1:59:22       1|1:100:75
+7      56255787        rs55690943      G       C       .       PASS    AA=G;DP=113     GT:GQ:DP        1|1:86:28       1|1:60:25       1|1:100:61
+3      20932855        rs6776153       A       G       .       PASS    AA=G;DP=132     GT:GQ:DP        1|1:86:28       1|1:60:30       1|1:100:72
+11     123739349       rs545780        T       C       .       PASS    AA=C;DP=110     GT:GQ:DP        1|1:86:28       1|1:62:20       1|1:100:64
+13     113947320       rs407531        G       A       .       PASS    AA=A;DP=123     GT:GQ:DP        1|1:86:28       1|1:62:20       1|1:100:75
+2      2998516 rs28889638      T       G       .       PASS    AA=G;DP=108     GT:GQ:DP        1|1:86:28       1|1:63:29       1|1:100:52
+20     10584083        rs6040056       T       C       .       PASS    AA=C;DP=100     GT:GQ:DP        1|1:86:28       1|1:65:20       1|1:100:46
+9      20739291        rs10757145      G       A       .       PASS    AA=A;DP=114     GT:GQ:DP        1|1:86:28       1|1:65:20       1|1:100:69
+9      11063747        rs10756177      C       G       .       PASS    AA=G;DP=121     GT:GQ:DP        1|1:86:28       1|1:65:20       1|1:100:73
+12     117059479       rs2088702       T       C       .       PASS    AA=C;DP=114     GT:GQ:DP        1|1:86:28       1|1:65:22       1|1:100:63
+9      28368067        rs7025911       C       T       .       PASS    AA=T;DP=96      GT:GQ:DP        1|1:86:28       1|1:68:21       1|1:100:44
+8      119727567       rs2460976       A       G       .       PASS    AA=G;DP=143     GT:GQ:DP        1|1:86:28       1|1:68:22       1|1:100:93
+3      153874698       rs9878891       C       A       .       PASS    AA=A;DP=90      GT:GQ:DP        1|1:86:28       1|1:71:22       1|1:100:41
+9      16025486        rs1887670       C       G       .       PASS    AA=a;DP=94      GT:GQ:DP        1|1:86:28       1|1:71:22       1|1:100:44
+9      106271333       rs2948967       A       G       .       PASS    AA=G;DP=115     GT:GQ:DP        1|1:86:28       1|1:71:23       1|1:100:70
+6      37555053        rs2797790       G       A       .       PASS    AA=A;DP=114     GT:GQ:DP        1|1:86:28       1|1:71:24       1|1:100:63
+2      107196105       rs6543491       G       T       .       PASS    AA=G;DP=100     GT:GQ:DP        1|1:86:28       1|1:74:23       1|1:100:49
+15     68194068        rs2927407       G       A       .       PASS    AA=A;DP=122     GT:GQ:DP        1|1:86:28       1|1:74:24       1|1:100:70
+6      118677683       rs281872        A       G       .       PASS    AA=A;DP=122     GT:GQ:DP        1|1:86:28       1|1:74:24       1|1:100:71
+12     4603317 rs1990316       T       G       .       PASS    AA=T;DP=94      GT:GQ:DP        1|1:86:28       1|1:77:24       1|1:100:42
+3      194099394       rs2886870       T       G       .       PASS    AA=A;DP=120     GT:GQ:DP        1|1:86:28       1|1:77:24       1|1:100:68
+5      160268383       rs1516647       T       G       .       PASS    AA=G;DP=124     GT:GQ:DP        1|1:86:28       1|1:77:25       1|1:100:71
+4      45391623        rs1840744       C       T       .       PASS    AA=C;DP=105     GT:GQ:DP        1|1:86:28       1|1:80:26       1|1:100:53
+4      68471314        rs2119382       T       C       .       PASS    AA=t;DP=122     GT:GQ:DP        1|1:86:28       1|1:80:26       1|1:100:66
+11     127933215       rs4436558       T       C       .       PASS    AA=t;DP=122     GT:GQ:DP        1|1:86:28       1|1:80:26       1|1:100:68
+16     50142094        rs2720422       A       G       .       PASS    AA=G;DP=112     GT:GQ:DP        1|1:86:28       1|1:80:27       1|1:100:58
+17     61422244        rs12938123      C       G       .       PASS    AA=G;DP=109     GT:GQ:DP        1|1:86:28       1|1:80:30       1|1:100:52
+11     115777549       rs4938268       A       G       .       PASS    AA=G;DP=155     GT:GQ:DP        1|1:86:28       1|1:81:31       1|1:100:81
+3      56832823        rs2317443       G       A       .       PASS    AA=A;DP=107     GT:GQ:DP        1|1:86:28       1|1:83:27       1|1:100:51
+19     34128588        rs12610768      A       G       .       PASS    AA=.;DP=134     GT:GQ:DP        1|1:86:28       1|1:83:27       1|1:100:76
+3      140878475       rs7617537       A       T       .       PASS    AA=A;DP=132     GT:GQ:DP        1|1:86:28       1|1:86:27       1|1:100:81
+5      115081740       rs251884        C       G       .       PASS    AA=G;DP=140     GT:GQ:DP        1|1:86:28       1|1:86:28       1|1:100:85
+3      103998981       rs825358        G       C       .       PASS    AA=C;DP=131     GT:GQ:DP        1|1:86:28       1|1:86:30       1|1:100:71
+12     52360963        rs9737721       A       T       .       PASS    AA=T;DP=87      GT:GQ:DP        1|1:86:28       1|1:89:28       1|1:100:29
+7      9857812 rs1514880       A       G       .       PASS    AA=G;DP=113     GT:GQ:DP        1|1:86:28       1|1:89:28       1|1:100:56
+1      175868691       rs1252068       C       T       .       PASS    AA=T;DP=135;HM2;HM3     GT:GQ:DP        1|1:86:28       1|1:89:28       1|1:100:81
+2      44177588        rs6757201       C       T       .       PASS    AA=T;DP=140     GT:GQ:DP        1|1:86:28       1|1:89:28       1|1:100:85
+2      189105396       rs10931365      G       A       .       PASS    AA=A;DP=137     GT:GQ:DP        1|1:86:28       1|1:89:29       1|1:100:83
+14     100524759       rs8021854       C       A       .       PASS    AA=A;DP=142     GT:GQ:DP        1|1:86:28       1|1:89:40       1|1:100:73
+3      173153645       rs7639862       C       T       .       PASS    AA=T;DP=113     GT:GQ:DP        1|1:86:28       1|1:95:30       1|1:100:57
+1      157729519       rs7525975       T       G       .       PASS    AA=T;DP=148;HM2 GT:GQ:DP        1|1:86:28       1|1:98:33       1|1:100:86
+10     94285296        rs7898493       C       G       .       PASS    AA=G;DP=141     GT:GQ:DP        1|1:86:29       1|1:100:36      1|1:100:78
+22     18402498        rs2520733       C       G       .       PASS    AA=G;DP=122     GT:GQ:DP        1|1:86:29       1|1:20:11       1|1:100:83
+16     82774563        rs4782591       C       T       .       PASS    AA=T;DP=104     GT:GQ:DP        1|1:86:29       1|1:35:10       1|1:100:54
+16     1053622 rs547673        T       C       .       PASS    AA=C;DP=96      GT:GQ:DP        1|1:86:29       1|1:35:11       1|1:100:44
+1      210721914       rs791562        T       G       .       PASS    AA=G;DP=90;HM2  GT:GQ:DP        1|1:86:29       1|1:47:14       1|1:100:47
+11     107055309       rs17107323      G       C       .       PASS    AA=G;DP=112     GT:GQ:DP        1|1:86:29       1|1:53:18       1|1:100:69
+1      171214812       rs7543619       C       T       .       PASS    AA=T;DP=101;HM2 GT:GQ:DP        1|1:86:29       1|1:55:23       1|1:100:45
+3      24120962        rs1511544       T       C       .       PASS    AA=C;DP=121     GT:GQ:DP        1|1:86:29       1|1:56:19       1|1:100:71
+6      146601996       rs9497500       A       G       .       PASS    AA=G;DP=120     GT:GQ:DP        1|1:86:29       1|1:59:19       1|1:100:69
+10     9115403 rs1444772       C       T       .       PASS    AA=T;DP=107     GT:GQ:DP        1|1:86:29       1|1:59:22       1|1:100:57
+5      92963683        rs318107        A       T       .       PASS    AA=T;DP=118     GT:GQ:DP        1|1:86:29       1|1:68:21       1|1:100:71
+16     54160727        rs3785162       C       T       .       PASS    AA=C;DP=123     GT:GQ:DP        1|1:86:29       1|1:68:21       1|1:100:72
+1      78815969        rs2184229       T       C       .       PASS    AA=T;DP=131;HM2 GT:GQ:DP        1|1:86:29       1|1:68:22       1|1:100:75
+1      16088195        rs1262788       G       C       .       PASS    AA=C;DP=97      GT:GQ:DP        1|1:86:29       1|1:71:23       1|1:100:35
+7      114769064       rs10224524      A       T       .       PASS    AA=T;DP=100     GT:GQ:DP        1|1:86:29       1|1:71:23       1|1:100:47
+5      53824229        rs10075503      A       G       .       PASS    AA=G;DP=135     GT:GQ:DP        1|1:86:29       1|1:74:24       1|1:100:79
+2      178946162       rs7607321       A       T       .       PASS    AA=T;DP=100     GT:GQ:DP        1|1:86:29       1|1:77:24       1|1:100:47
+12     69081882        rs796845        C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        1|1:86:29       1|1:77:24       1|1:100:60
+4      148340375       rs1395818       A       G       .       PASS    AA=G;DP=119     GT:GQ:DP        1|1:86:29       1|1:77:24       1|1:100:66
+4      162963726       rs1946655       A       G       .       PASS    AA=N;DP=116     GT:GQ:DP        1|1:86:29       1|1:77:25       1|1:100:62
+11     114249666       rs2250727       C       G       .       PASS    AA=C;DP=115     GT:GQ:DP        1|1:86:29       1|1:77:25       1|1:100:63
+5      75327553        rs10071716      A       G       .       PASS    AA=G;DP=117     GT:GQ:DP        1|1:86:29       1|1:77:25       1|1:100:64
+7      102840671       rs7779997       A       G       .       PASS    AA=G;DP=131     GT:GQ:DP        1|1:86:29       1|1:77:25       1|1:100:78
+11     55657020        rs2512790       C       G       .       PASS    AA=-;DP=110     GT:GQ:DP        1|1:86:29       1|1:80:25       1|1:100:46
+4      12049483        rs7673955       C       T       .       PASS    AA=T;DP=138     GT:GQ:DP        1|1:86:29       1|1:98:31       1|1:100:79
+5      153689236       rs1004976       G       A       .       PASS    AA=A;DP=125     GT:GQ:DP        1|1:86:30       1|0:100:16      1|1:100:77
+4      15398513        rs3775954       A       G       .       PASS    AA=G;DP=98      GT:GQ:DP        1|1:86:30       1|1:41:12       1|1:100:44
+13     109819760       rs4773172       T       C       .       PASS    AA=t;DP=97      GT:GQ:DP        1|1:86:30       1|1:49:26       1|1:100:33
+22     26425783        rs5752613       A       G       .       PASS    AA=A;DP=130     GT:GQ:DP        1|1:86:30       1|1:50:17       1|1:100:79
+9      124915362       rs700090        A       G       .       PASS    AA=T;DP=114     GT:GQ:DP        1|1:86:30       1|1:52:22       1|1:100:63
+14     92353442        rs2402199       A       G       .       PASS    AA=G;DP=123     GT:GQ:DP        1|1:86:30       1|1:62:20       1|1:100:74
+6      88520743        rs9351129       G       C       .       PASS    AA=G;DP=114     GT:GQ:DP        1|1:86:30       1|1:65:21       1|1:100:66
+3      191795409       rs7642899       C       G       .       PASS    AA=G;DP=112     GT:GQ:DP        1|1:86:30       1|1:74:23       1|1:100:62
+14     37165820        rs466255        A       G       .       PASS    AA=G;DP=111     GT:GQ:DP        1|1:86:31       1|1:35:17       1|1:100:55
+3      50612998        rs107457        T       G       .       PASS    AA=G;DP=113     GT:GQ:DP        1|1:86:31       1|1:50:15       1|1:100:65
+16     26425859        rs12444754      T       C       .       PASS    AA=C;DP=145     GT:GQ:DP        1|1:86:33       0|1:15:26       1|0:100:88
+6      154301722       rs282088        G       A       .       PASS    AA=A;DP=119     GT:GQ:DP        1|1:86:33       1|1:57:23       1|1:100:65
+8      36208329        rs7014761       C       T       .       PASS    AA=T;DP=101     GT:GQ:DP        1|1:86:33       1|1:62:19       1|1:100:40
+X      616449  rs5946429       A       G       .       PASS    AA=N;DP=97      GT:GQ:DP        1|1:86:34       1|1:59:19       1|1:100:40
+7      142265373       rs1009848       A       G       .       PASS    AA=G;DP=145     GT:GQ:DP        1|1:86:34       1|1:86:27       1|1:100:82
+3      188143127       rs11719440      T       G       .       PASS    AA=T;DP=117     GT:GQ:DP        1|1:86:35       0|1:100:18      1|0:100:65
+9      136942234       rs1105323       T       C       .       PASS    AA=C;DP=118     GT:GQ:DP        1|1:86:35       1|1:74:25       1|1:100:58
+3      120927504       rs7649166       C       T       .       PASS    AA=T;DP=127     GT:GQ:DP        1|1:86:35       1|1:77:25       1|1:100:67
+12     88737167        rs1569069       T       C       .       PASS    AA=C;DP=134     GT:GQ:DP        1|1:86:38       1|1:32:16       1|1:100:33
+4      7437126 rs4615171       A       G       .       PASS    AA=G;DP=134     GT:GQ:DP        1|1:86:39       1|1:35:20       1|1:100:76
+4      53722954        rs4864448       G       A       .       PASS    AA=A;DP=114     GT:GQ:DP        1|1:86:39       1|1:41:18       1|1:100:58
+3      13877001        rs9849631       A       G       .       PASS    AA=A;DP=131     GT:GQ:DP        1|1:86:39       1|1:44:14       1|1:100:82
+9      32852544        rs4879619       G       T       .       PASS    AA=T;DP=107     GT:GQ:DP        1|1:86:39       1|1:56:17       1|1:100:52
+5      60140993        rs6449504       T       C       .       PASS    AA=C;DP=131     GT:GQ:DP        1|1:86:39       1|1:77:24       1|1:100:65
+5      41597477        rs10064277      T       G       .       PASS    AA=G;DP=139     GT:GQ:DP        1|1:86:39       1|1:81:33       1|1:100:69
+10     92786224        rs754313        T       C       .       PASS    AA=C;DP=136     GT:GQ:DP        1|1:86:39       1|1:86:27       1|1:100:69
+1      42389619        rs3754283       A       G       .       PASS    AA=a;DP=122;HM2;HM3     GT:GQ:DP        1|1:86:41       0|1:52:16       1|0:100:63
+12     52128739        rs2683514       T       C       .       PASS    AA=C;DP=115     GT:GQ:DP        1|1:86:42       1|1:49:19       1|1:100:43
+10     90285410        rs10736359      G       A       .       PASS    AA=A;DP=86      GT:GQ:DP        1|1:87:28       1|1:65:20       1|1:100:31
+1      24545834        rs6702097       G       A       .       PASS    AA=G;DP=105;HM2 GT:GQ:DP        1|1:87:29       1|0:100:14      1|1:100:62
+10     19280986        rs7079871       G       A       .       PASS    AA=A;DP=90      GT:GQ:DP        1|1:87:29       1|0:100:14      1|1:94:45
+4      78547564        rs28522905      G       A       .       PASS    AA=g;DP=86      GT:GQ:DP        1|1:87:29       1|0:100:15      1|1:99:33
+5      131230524       rs1875177       T       C       .       PASS    AA=C;DP=114     GT:GQ:DP        1|1:87:29       1|0:100:17      1|1:100:67
+20     8731684 rs1997751       C       G       .       PASS    AA=g;DP=125     GT:GQ:DP        1|1:87:29       1|0:100:18      1|1:100:76
+10     86942616        rs7911946       A       G       .       PASS    AA=G;DP=109     GT:GQ:DP        1|1:87:29       1|0:100:19      1|1:100:52
+5      25903339        rs7734950       G       A       .       PASS    AA=G;DP=102     GT:GQ:DP        1|1:87:29       1|0:100:19      1|1:100:55
+1      192009716       rs6695340       G       T       .       PASS    AA=G;DP=121;HM2 GT:GQ:DP        1|1:87:29       1|0:100:20      1|1:100:75
+18     34111028        rs11660716      G       A       .       PASS    AA=a;DP=102     GT:GQ:DP        1|1:87:29       1|0:100:21      1|1:100:46
+3      40382674        rs4246666       C       T       .       PASS    AA=T;DP=103     GT:GQ:DP        1|1:87:29       1|0:100:21      1|1:100:51
+21     29145059        rs11088095      A       T       .       PASS    AA=T;DP=111     GT:GQ:DP        1|1:87:29       1|0:100:22      1|1:100:60
+10     51955652        rs3011778       C       T       .       PASS    AA=T;DP=132     GT:GQ:DP        1|1:87:29       1|0:100:23      1|1:100:74
+8      108337091       rs2514868       C       T       .       PASS    AA=T;DP=110     GT:GQ:DP        1|1:87:29       1|0:100:24      1|1:100:56
+10     83710148        rs7088324       T       A       .       PASS    AA=A;DP=114     GT:GQ:DP        1|1:87:29       1|0:100:24      1|1:100:62
+20     8497393 rs6086504       A       G       .       PASS    AA=A;DP=121     GT:GQ:DP        1|1:87:29       1|0:100:25      1|1:100:71
+1      212586238       rs7528860       A       G       .       PASS    AA=A;DP=98      GT:GQ:DP        1|1:87:29       1|0:100:26      1|1:100:34
+18     67018238        rs12969802      A       G       .       PASS    AA=G;DP=115     GT:GQ:DP        1|1:87:29       1|0:100:26      1|1:100:60
+4      4400283 rs12501670      C       A       .       PASS    AA=A;DP=111     GT:GQ:DP        1|1:87:29       1|0:100:28      1|1:100:51
+7      146615716       rs1404707       T       C       .       PASS    AA=C;DP=125     GT:GQ:DP        1|1:87:29       1|0:100:28      1|1:100:68
+16     9518503 rs1548845       C       A       .       PASS    AA=A;DP=119     GT:GQ:DP        1|1:87:29       1|0:100:29      1|1:100:52
+6      65735966        rs718017        A       G       .       PASS    AA=A;DP=127     GT:GQ:DP        1|1:87:29       1|0:100:29      1|1:100:68
+6      135032580       rs60239013      C       G       .       PASS    AA=C;DP=138     GT:GQ:DP        1|1:87:29       1|0:100:29      1|1:100:78
+5      170075944       rs7733559       T       A       .       PASS    AA=A;DP=119     GT:GQ:DP        1|1:87:29       1|0:100:30      1|1:100:61
+7      10713637        rs17163432      C       T       .       PASS    AA=C;DP=133     GT:GQ:DP        1|1:87:29       1|0:100:30      1|1:100:76
+20     680767  rs6516204       C       G       .       PASS    AA=C;DP=112     GT:GQ:DP        1|1:87:29       1|0:100:31      1|1:100:42
+4      17821376        rs1604788       G       T       .       PASS    AA=T;DP=124     GT:GQ:DP        1|1:87:29       1|0:100:35      1|1:100:60
+5      36473862        rs16903041      G       A       .       PASS    AA=G;DP=137     GT:GQ:DP        1|1:87:29       1|0:100:36      1|1:100:72
+10     2039591 rs10903625      A       G       .       PASS    AA=N;DP=96      GT:GQ:DP        1|1:87:29       1|0:30:9        1|1:100:45
+5      137803480       rs982085        C       G       .       PASS    AA=G;DP=86      GT:GQ:DP        1|1:87:29       1|0:30:9        1|1:85:40
+7      139312665       rs41721 T       C       .       PASS    AA=T;DP=146     GT:GQ:DP        1|1:87:29       1|0:36:27       1|1:100:92
+20     40760036        rs4812632       G       A       .       PASS    AA=C;DP=99      GT:GQ:DP        1|1:87:29       1|0:39:24       1|1:95:46
+5      169060962       rs1483128       G       T       .       PASS    AA=T;DP=137     GT:GQ:DP        1|1:87:29       1|0:47:21       1|1:100:85
+2      205620455       rs7563474       C       A       .       PASS    AA=A;DP=102     GT:GQ:DP        1|1:87:29       1|0:56:19       1|1:100:54
+19     54455968        rs1654319       C       A       .       PASS    AA=A;DP=123     GT:GQ:DP        1|1:87:29       1|0:59:19       1|1:100:77
+9      134963900       rs1062356       G       C       .       PASS    AA=C;DP=130     GT:GQ:DP        1|1:87:29       1|0:66:12       1|1:100:92
+6      10134086        .       G       A       .       PASS    AA=G;DP=93      GT:GQ:DP        1|1:87:29       1|0:78:15       1|1:100:50
+3      86260271        rs2325001       T       C       .       PASS    AA=C;DP=111     GT:GQ:DP        1|1:87:29       1|0:79:16       1|1:100:67
+5      6543719 rs10073415      G       A       .       PASS    AA=G;DP=125     GT:GQ:DP        1|1:87:29       1|0:90:16       1|1:100:80
+3      83613476        rs4287918       A       G       .       PASS    AA=A;DP=113     GT:GQ:DP        1|1:87:29       1|0:90:26       1|1:100:57
+6      29829734        rs1611297       C       T       .       PASS    AA=.;DP=99      GT:GQ:DP        1|1:87:29       1|0:95:16       1|1:100:54
+11     9204439 rs57655359      C       T       .       PASS    AA=T;DP=107     GT:GQ:DP        1|1:87:29       1|0:99:27       1|1:76:37
+12     38875374        rs2046931       G       A       .       PASS    AA=A;DP=102     GT:GQ:DP        1|1:87:30       0|1:100:14      1|0:100:56
+18     5463857 rs4798364       A       C       .       PASS    AA=C;DP=99      GT:GQ:DP        1|1:87:30       0|1:100:17      1|0:100:50
+9      20288585        rs10964520      C       T       .       PASS    AA=T;DP=117     GT:GQ:DP        1|1:87:30       0|1:100:17      1|0:100:74
+18     74390618        rs8084735       C       A       .       PASS    AA=c;DP=115     GT:GQ:DP        1|1:87:30       0|1:100:18      1|0:100:67
+15     47640427        rs6493376       T       C       .       PASS    AA=T;DP=107     GT:GQ:DP        1|1:87:30       0|1:100:19      1|0:100:58
+2      42871558        rs12998043      T       C       .       PASS    AA=C;DP=140     GT:GQ:DP        1|1:87:30       0|1:100:19      1|0:100:93
+8      1625493 rs35324141      T       C       .       PASS    AA=C;DP=126     GT:GQ:DP        1|1:87:30       0|1:100:20      1|0:100:62
+1      168218032       rs2273457       A       T       .       PASS    AA=A;DP=117;HM2 GT:GQ:DP        1|1:87:30       0|1:100:20      1|0:100:67
+6      162575335       rs6940616       T       G       .       PASS    AA=T;DP=114     GT:GQ:DP        1|1:87:30       0|1:100:21      1|0:100:61
+20     6345323 rs173322        A       G       .       PASS    AA=G;DP=128     GT:GQ:DP        1|1:87:30       0|1:100:21      1|0:100:77
+12     103197392       rs7301631       T       C       .       PASS    AA=T;DP=128     GT:GQ:DP        1|1:87:30       0|1:100:22      1|0:100:78
+1      175792690       rs11806578      A       G       .       PASS    AA=A;DP=115     GT:GQ:DP        1|1:87:30       0|1:100:23      1|0:100:63
+8      126375601       rs7812933       C       A       .       PASS    AA=A;DP=117     GT:GQ:DP        1|1:87:30       0|1:100:26      1|0:100:60
+1      219905041       rs12035928      G       A       .       PASS    AA=G;DP=117     GT:GQ:DP        1|1:87:30       0|1:100:27      1|0:100:60
+18     26536742        rs2678801       T       A       .       PASS    AA=A;DP=130     GT:GQ:DP        1|1:87:30       0|1:100:28      1|0:100:69
+6      18753707        rs9396891       C       G       .       PASS    AA=C;DP=130     GT:GQ:DP        1|1:87:30       0|1:100:28      1|0:100:69
+2      225645346       rs409721        T       G       .       PASS    AA=G;DP=133     GT:GQ:DP        1|1:87:30       0|1:100:29      1|0:100:73
+11     72869357        rs533217        G       A       .       PASS    AA=A;DP=130     GT:GQ:DP        1|1:87:30       0|1:100:32      1|0:100:70
+16     6888176 rs872772        C       T       .       PASS    AA=T;DP=148     GT:GQ:DP        1|1:87:30       0|1:100:33      1|0:100:46
+8      118367170       rs1695713       A       G       .       PASS    AA=a;DP=149     GT:GQ:DP        1|1:87:30       0|1:100:35      1|0:100:87
+15     89932113        rs9652521       C       T       .       PASS    AA=c;DP=158     GT:GQ:DP        1|1:87:30       0|1:100:42      1|0:100:87
+3      198795467       rs7613268       T       C       .       PASS    AA=T;DP=111     GT:GQ:DP        1|1:87:30       0|1:11:17       1|0:100:62
+7      18109568        rs2731548       G       A       .       PASS    AA=A;DP=115     GT:GQ:DP        1|1:87:30       0|1:36:25       1|0:100:61
+1      192753399       rs4266861       C       T       .       PASS    AA=C;DP=102;HM2;HM3     GT:GQ:DP        1|1:87:30       0|1:45:17       1|0:100:55
+2      65929205        rs7556688       T       C       .       PASS    AA=C;DP=120     GT:GQ:DP        1|1:87:30       0|1:58:17       1|0:100:74
+6      107268225       rs2642465       G       A       .       PASS    AA=A;DP=115     GT:GQ:DP        1|1:87:30       0|1:63:19       1|0:100:66
+6      32675996        rs9270732       C       T       .       PASS    AA=T;DP=102     GT:GQ:DP        1|1:87:30       0|1:67:17       1|0:100:55
+5      3257921 rs2439652       C       T       .       PASS    AA=T;DP=135     GT:GQ:DP        1|1:87:30       0|1:68:18       1|0:100:90
+21     17207071        rs2824120       C       T       .       PASS    AA=C;DP=96      GT:GQ:DP        1|1:87:30       0|1:69:17       1|0:100:49
+7      104420216       rs6976394       A       G       .       PASS    AA=G;DP=93      GT:GQ:DP        1|1:87:30       0|1:74:20       1|0:100:43
+7      90648610        rs2518785       A       C       .       PASS    AA=A;DP=101     GT:GQ:DP        1|1:87:30       0|1:76:19       1|0:100:52
+7      4855771 rs56008584      G       C       .       PASS    AA=G;DP=118     GT:GQ:DP        1|1:87:30       0|1:78:28       1|0:100:66
+3      180711483       rs2879587       C       T       .       PASS    AA=C;DP=121     GT:GQ:DP        1|1:87:30       0|1:80:16       1|0:100:76
+3      70607102        rs4491863       A       G       .       PASS    AA=G;DP=134     GT:GQ:DP        1|1:87:30       0|1:85:25       1|0:100:42
+2      10027311        rs11886114      G       A       .       PASS    AA=G;DP=115     GT:GQ:DP        1|1:87:30       0|1:86:21       1|0:100:66
+15     52554397        rs2414320       T       C       .       PASS    AA=T;DP=114     GT:GQ:DP        1|1:87:30       0|1:86:22       1|0:100:63
+7      104125429       rs12705266      A       G       .       PASS    AA=A;DP=121     GT:GQ:DP        1|1:87:30       0|1:97:12       1|0:100:53
+6      13406971        rs909508        G       A       .       PASS    AA=G;DP=149     GT:GQ:DP        1|1:87:30       0|1:97:20       1|0:100:52
+16     54298705        rs28544888      T       C       .       PASS    AA=C;DP=115     GT:GQ:DP        1|1:87:30       1|0:100:16      1|1:100:67
+12     21613920        rs6487241       A       C       .       PASS    AA=C;DP=105     GT:GQ:DP        1|1:87:30       1|0:100:17      1|1:93:58
+9      85925274        rs10868101      A       G       .       PASS    AA=G;DP=112     GT:GQ:DP        1|1:87:30       1|0:100:20      1|1:100:63
+3      100367410       rs60452344      A       T       .       PASS    AA=T;DP=103     GT:GQ:DP        1|1:87:30       1|0:100:21      1|1:100:53
+2      192197841       rs6761165       C       T       .       PASS    AA=C;DP=121     GT:GQ:DP        1|1:87:30       1|0:100:22      1|1:100:68
+1      169811477       rs235510        G       A       .       PASS    AA=g;DP=104;HM2 GT:GQ:DP        1|1:87:30       1|0:100:22      1|1:74:48
+5      131128145       rs1016068       T       C       .       PASS    AA=C;DP=114     GT:GQ:DP        1|1:87:30       1|0:100:23      1|1:100:62
+2      167884094       rs1540821       T       C       .       PASS    AA=C;DP=113     GT:GQ:DP        1|1:87:30       1|0:100:23      1|1:100:66
+2      81811523        rs12469722      G       T       .       PASS    AA=G;DP=98      GT:GQ:DP        1|1:87:30       1|0:100:24      1|1:97:43
+3      32172096        rs7648515       G       A       .       PASS    AA=G;DP=135     GT:GQ:DP        1|1:87:30       1|0:100:26      1|1:100:79
+11     6871116 rs2595413       T       A       .       PASS    AA=N;DP=108     GT:GQ:DP        1|1:87:30       1|0:100:27      1|1:100:43
+15     51874280        rs4643265       G       A       .       PASS    AA=G;DP=113     GT:GQ:DP        1|1:87:30       1|0:100:28      1|1:100:46
+4      171823775       rs4574369       T       G       .       PASS    AA=G;DP=115     GT:GQ:DP        1|1:87:30       1|0:100:28      1|1:100:57
+1      117388773       rs4357512       G       A       .       PASS    AA=A;DP=125;HM2;HM3     GT:GQ:DP        1|1:87:30       1|0:100:29      1|1:100:66
+10     14386076        rs1218475       A       G       .       PASS    AA=A;DP=116     GT:GQ:DP        1|1:87:30       1|0:100:31      1|1:100:44
+15     94870505        rs7177487       C       A       .       PASS    AA=A;DP=130     GT:GQ:DP        1|1:87:30       1|0:100:31      1|1:100:70
+4      60065722        rs4288039       T       C       .       PASS    AA=T;DP=122     GT:GQ:DP        1|1:87:30       1|0:54:20       1|1:100:53
+1      87240996        rs10747334      G       A       .       PASS    AA=A;DP=93;HM2;HM3      GT:GQ:DP        1|1:87:30       1|0:61:13       1|1:61:47
+16     85588194        rs9928537       T       C       .       PASS    AA=C;DP=142     GT:GQ:DP        1|1:87:30       1|0:82:17       1|1:100:92
+20     60327831        rs2297589       A       G       .       PASS    AA=.;DP=93      GT:GQ:DP        1|1:87:30       1|0:86:15       1|1:100:41
+1      109687894       rs11102974      G       A       .       PASS    AA=A;DP=109;HM2 GT:GQ:DP        1|1:87:30       1|0:88:19       1|1:100:59
+4      81891220        rs28425653      C       G       .       PASS    AA=C;DP=134     GT:GQ:DP        1|1:87:30       1|0:92:28       1|1:100:76
+3      173717728       rs231984        C       G       .       PASS    AA=G;DP=99      GT:GQ:DP        1|1:87:30       1|0:98:25       1|1:100:35
+6      54484254        rs561443        T       C       .       PASS    AA=C;DP=108     GT:GQ:DP        1|1:87:31       0|1:100:16      1|0:100:58
+5      172247678       rs512956        C       A       .       PASS    AA=A;DP=113     GT:GQ:DP        1|1:87:31       0|1:100:22      1|0:100:61
+17     59700626        rs55701964      C       T       .       PASS    AA=T;DP=143     GT:GQ:DP        1|1:87:31       0|1:100:24      1|0:100:89
+4      171709917       rs396325        C       T       .       PASS    AA=C;DP=130     GT:GQ:DP        1|1:87:31       0|1:100:25      1|0:100:70
+10     22857725        rs2364115       C       G       .       PASS    AA=G;DP=130     GT:GQ:DP        1|1:87:31       0|1:100:26      1|0:100:69
+2      133945863       rs12467083      G       A       .       PASS    AA=G;DP=131     GT:GQ:DP        1|1:87:31       0|1:100:26      1|0:100:75
+14     47262483        rs7158852       A       G       .       PASS    AA=A;DP=122     GT:GQ:DP        1|1:87:31       0|1:100:30      1|0:100:63
+9      6967559 rs1340514       A       G       .       PASS    AA=G;DP=107     GT:GQ:DP        1|1:87:31       0|1:100:31      1|0:100:46
+13     59469154        rs423479        A       C       .       PASS    AA=A;DP=123     GT:GQ:DP        1|1:87:31       0|1:100:32      1|0:100:61
+10     53250225        rs7918039       G       A       .       PASS    AA=g;DP=126     GT:GQ:DP        1|1:87:31       0|1:100:34      1|0:100:62
+8      98464436        rs10100389      A       G       .       PASS    AA=G;DP=123     GT:GQ:DP        1|1:87:31       0|1:61:22       1|0:100:70
+2      73485072        rs11899902      G       A       .       PASS    AA=G;DP=112     GT:GQ:DP        1|1:87:31       0|1:76:24       1|0:100:58
+12     130646059       rs7316770       G       A       .       PASS    AA=a;DP=123     GT:GQ:DP        1|1:87:31       0|1:82:25       1|0:100:70
+13     75607873        rs9573791       C       T       .       PASS    AA=T;DP=134     GT:GQ:DP        1|1:87:31       1|0:100:24      1|1:100:80
+19     14996524        rs6417253       C       G       .       PASS    AA=G;DP=99      GT:GQ:DP        1|1:87:31       1|0:51:14       1|1:100:54
+18     59576680        rs1105579       G       A       .       PASS    AA=A;DP=139     GT:GQ:DP        1|1:87:32       0|0:47:27       1|0:100:80
+10     11089908        rs201118        T       C       .       PASS    AA=T;DP=128     GT:GQ:DP        1|1:87:32       0|1:48:22       1|0:100:75
+1      39822098        rs4660846       C       T       .       PASS    AA=C;DP=119;HM2 GT:GQ:DP        1|1:87:32       1|0:74:22       1|1:100:65
+4      98732951        rs12649979      A       G       .       PASS    AA=G;DP=111     GT:GQ:DP        1|1:87:32       1|1:65:20       1|1:100:51
+5      107249975       rs10035487      T       C       .       PASS    AA=C;DP=117     GT:GQ:DP        1|1:87:32       1|1:74:23       1|1:100:61
+5      167598176       rs12519946      C       G       .       PASS    AA=C;DP=125     GT:GQ:DP        1|1:87:33       0|1:100:18      1|0:100:77
+17     14338230        rs684828        T       A       .       PASS    AA=A;DP=109     GT:GQ:DP        1|1:87:34       1|1:47:17       1|1:100:58
+22     35489697        rs739001        T       C       .       PASS    AA=C;DP=130     GT:GQ:DP        1|1:87:34       1|1:62:20       1|1:100:77
+6      77227134        rs6924853       T       C       .       PASS    AA=C;DP=130     GT:GQ:DP        1|1:87:35       1|1:32:20       1|1:100:76
+8      61908190        rs4416857       C       A       .       PASS    AA=A;DP=136     GT:GQ:DP        1|1:87:36       1|1:36:16       1|1:100:85
+18     53878080        rs9954721       T       C       .       PASS    AA=C;DP=144     GT:GQ:DP        1|1:87:36       1|1:81:32       1|1:100:75
+17     12756048        rs7221396       A       G       .       PASS    AA=G;DP=128     GT:GQ:DP        1|1:87:37       1|1:93:31       1|1:100:59
+19     51105238        rs8112618       A       G       .       PASS    AA=G;DP=136     GT:GQ:DP        1|1:87:42       0|1:56:15       1|0:100:80
+6      29950136        rs9259003       T       G       .       PASS    AA=.;DP=146     GT:GQ:DP        1|1:87:45       1|0:100:37      1|1:100:46
+2      25084174        rs4665746       A       G       .       PASS    AA=A;DP=156     GT:GQ:DP        1|1:87:48       1|1:34:26       1|1:100:85
+22     21078894        rs396433        G       A       .       PASS    AA=.;DP=102     GT:GQ:DP        1|1:88:28       1|1:14:13       1|1:100:63
+9      32304084        rs1121130       G       A       .       PASS    AA=A;DP=92      GT:GQ:DP        1|1:88:29       1|1:11:10       1|1:100:52
+8      35751231        .       A       T       .       PASS    AA=A;DP=135     GT:GQ:DP        1|1:88:31       0|0:100:35      1|0:100:70
+2      134736028       rs62165735      C       G       .       PASS    AA=C;DP=172     GT:GQ:DP        1|1:88:31       0|0:100:36      1|0:100:55
+20     43660907        rs2425710       T       C       .       PASS    AA=C;DP=139     GT:GQ:DP        1|1:88:31       0|0:100:36      1|0:100:74
+1      152795333       rs7550664       A       C       .       PASS    AA=A;DP=131     GT:GQ:DP        1|1:88:31       0|0:27:20       1|0:100:80
+2      134867562       rs62171363      C       T       .       PASS    AA=C;DP=116     GT:GQ:DP        1|1:88:31       0|0:36:13       1|0:100:71
+15     71935878        rs1452387       G       T       .       PASS    AA=G;DP=143     GT:GQ:DP        1|1:88:31       0|0:36:27       1|0:100:47
+4      106191062       .       C       A       .       PASS    AA=C;DP=126     GT:GQ:DP        1|1:88:31       0|0:39:13       1|0:100:81
+18     11371625        rs12457508      T       C       .       PASS    AA=T;DP=128     GT:GQ:DP        1|1:88:31       0|0:45:25       1|0:100:73
+2      235007392       .       A       G       .       PASS    AA=G;DP=117     GT:GQ:DP        1|1:88:31       0|0:48:18       1|0:100:67
+18     60377529        rs7239710       C       A       .       PASS    AA=C;DP=120     GT:GQ:DP        1|1:88:31       0|0:50:28       1|0:100:60
+4      188398024       rs13101597      A       C       .       PASS    AA=A;DP=117     GT:GQ:DP        1|1:88:31       0|0:50:28       1|0:100:61
+7      32077831        rs30602 T       A       .       PASS    AA=T;DP=111     GT:GQ:DP        1|1:88:31       0|0:51:17       1|0:100:64
+4      109526021       rs34516777      C       T       .       PASS    AA=C;DP=113     GT:GQ:DP        1|1:88:31       0|0:51:20       1|0:100:63
+12     116411069       .       C       T       .       PASS    AA=T;DP=108     GT:GQ:DP        1|1:88:31       0|0:54:18       1|0:100:62
+17     70915680        rs56339842      C       T       .       PASS    AA=C;DP=123     GT:GQ:DP        1|1:88:31       0|0:54:21       1|0:100:71
+3      110364613       rs13327808      C       T       .       PASS    AA=C;DP=102     GT:GQ:DP        1|1:88:31       0|0:56:25       1|0:100:47
+21     24245793        rs2828643       G       C       .       PASS    AA=g;DP=131     GT:GQ:DP        1|1:88:31       0|0:57:27       1|0:100:75
+14     23756829        rs58788688      A       G       .       PASS    AA=A;DP=94      GT:GQ:DP        1|1:88:31       0|0:63:21       1|0:100:41
+4      108889296       rs11930501      A       G       .       PASS    AA=A;DP=128     GT:GQ:DP        1|1:88:31       0|0:63:21       1|0:100:72
+6      166741639       .       C       T       .       PASS    AA=C;DP=112     GT:GQ:DP        1|1:88:31       0|0:66:22       1|0:100:60
+6      32543022        rs9268979       T       C       .       PASS    AA=t;DP=115     GT:GQ:DP        1|1:88:31       0|0:66:22       1|0:100:62
+6      142402402       rs4541765       C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        1|1:88:31       0|0:66:23       1|0:100:63
+2      211665403       rs34779036      G       A       .       PASS    AA=G;DP=142     GT:GQ:DP        1|1:88:31       0|0:66:24       1|0:100:88
+8      94325193        rs278560        A       G       .       PASS    AA=A;DP=118     GT:GQ:DP        1|1:88:31       0|0:72:24       1|0:100:65
+11     113994683       rs1792394       C       T       .       PASS    AA=-;DP=130     GT:GQ:DP        1|1:88:31       0|0:72:24       1|0:100:78
+3      117933004       rs1835852       C       A       .       PASS    AA=A;DP=134     GT:GQ:DP        1|1:88:31       0|0:72:24       1|0:100:81
+21     37757681        rs4817864       C       T       .       PASS    AA=C;DP=114     GT:GQ:DP        1|1:88:31       0|0:72:27       1|0:100:56
+9      113352788       rs10124270      C       A       .       PASS    AA=C;DP=116     GT:GQ:DP        1|1:88:31       0|0:75:27       1|0:100:59
+6      121021847       rs2095813       G       A       .       PASS    AA=a;DP=127     GT:GQ:DP        1|1:88:31       0|0:78:27       1|0:100:69
+2      88767487        rs6718735       A       G       .       PASS    AA=G;DP=128     GT:GQ:DP        1|1:88:31       0|0:81:28       1|0:100:69
+8      11648775        rs17153752      C       T       .       PASS    AA=T;DP=131     GT:GQ:DP        1|1:88:31       0|0:87:30       1|0:100:70
+7      8596069 rs59575675      G       T       .       PASS    AA=G;DP=132     GT:GQ:DP        1|1:88:31       0|0:90:30       1|0:100:70
+10     37106392        .       G       A       .       PASS    AA=G;DP=135     GT:GQ:DP        1|1:88:31       0|0:96:33       1|0:100:71
+5      11391873        rs26011 T       C       .       PASS    AA=C;DP=136     GT:GQ:DP        1|1:88:31       0|0:96:36       1|0:100:65
+18     37604290        rs16975296      A       T       .       PASS    AA=T;DP=126     GT:GQ:DP        1|1:88:31       0|1:100:20      1|0:100:75
+7      4804966 .       G       A       .       PASS    AA=C;DP=120     GT:GQ:DP        1|1:88:32       0|0:21:7        1|0:100:81
+3      10596793        rs11709049      T       C       .       PASS    AA=C;DP=113     GT:GQ:DP        1|1:88:32       0|0:60:20       1|0:100:61
+4      186376965       rs1534143       C       A       .       PASS    AA=A;DP=134     GT:GQ:DP        1|1:88:32       0|0:66:28       1|0:100:73
+10     16107247        rs10904664      T       A       .       PASS    AA=T;DP=139     GT:GQ:DP        1|1:88:32       0|0:75:25       1|0:100:78
+5      957125  .       C       T       .       PASS    AA=C;DP=139     GT:GQ:DP        1|1:88:32       0|0:78:29       1|0:100:80
+9      7783309 rs327753        T       C       .       PASS    AA=C;DP=137     GT:GQ:DP        1|1:88:32       0|0:81:27       1|0:100:38
+18     48996228        .       G       A       .       PASS    AA=G;DP=134     GT:GQ:DP        1|1:88:32       0|0:84:30       1|0:100:69
+21     21689220        .       A       G       .       PASS    AA=A;DP=120     GT:GQ:DP        1|1:88:32       0|0:90:30       1|0:100:60
+3      71842731        rs12487980      C       A       .       PASS    AA=A;DP=133     GT:GQ:DP        1|1:88:32       1|1:100:35      1|1:100:66
+18     47799619        rs9951844       G       C       .       PASS    AA=C;DP=124     GT:GQ:DP        1|1:88:33       0|0:57:19       1|0:100:72
+7      106882851       rs1018869       G       C       .       PASS    AA=C;DP=134     GT:GQ:DP        1|1:88:33       0|0:69:24       1|0:100:81
+13     19257699        rs4769906       C       T       .       PASS    AA=T;DP=148     GT:GQ:DP        1|1:88:33       0|0:75:26       1|0:100:89
+9      108859090       rs4489376       A       T       .       PASS    AA=A;DP=123     GT:GQ:DP        1|1:88:33       0|0:81:28       1|0:100:53
+7      133677341       rs4383919       G       A       .       PASS    AA=A;DP=151     GT:GQ:DP        1|1:88:33       0|0:90:30       1|0:100:89
+11     3341541 rs6578337       T       C       .       PASS    AA=t;DP=140     GT:GQ:DP        1|1:88:33       0|0:90:32       1|0:100:74
+10     52562047        rs4935228       G       A       .       PASS    AA=G;DP=118     GT:GQ:DP        1|1:88:34       0|0:48:18       1|0:100:67
+15     75859113        rs4886911       A       G       .       PASS    AA=a;DP=118     GT:GQ:DP        1|1:88:34       1|1:32:22       1|1:100:62
+12     36804388        rs1851126       T       C       .       PASS    AA=N;DP=130     GT:GQ:DP        1|1:88:34       1|1:52:23       1|1:100:71
+13     102479235       rs1590849       T       G       .       PASS    AA=G;DP=135     GT:GQ:DP        1|1:88:34       1|1:65:20       1|1:100:67
+13     51353099        rs1748124       T       C       .       PASS    AA=T;DP=132     GT:GQ:DP        1|1:88:34       1|1:65:20       1|1:100:78
+11     95607947        rs534203        A       G       .       PASS    AA=G;DP=127     GT:GQ:DP        1|1:88:36       0|1:100:29      1|0:100:66
+12     13507359        rs57701457      G       A       .       PASS    AA=G;DP=134     GT:GQ:DP        1|1:88:37       0|0:48:16       1|0:100:80
+18     75034557        rs11665148      T       C       .       PASS    AA=T;DP=148     GT:GQ:DP        1|1:88:37       0|0:75:25       1|0:100:44
+12     129808896       rs2632624       G       A       .       PASS    AA=N;DP=128     GT:GQ:DP        1|1:88:37       1|0:100:30      1|1:100:62
+4      157480629       rs2101585       T       G       .       PASS    AA=T;DP=107     GT:GQ:DP        1|1:88:39       1|0:100:26      1|1:100:38
+3      13193387        .       T       C       .       PASS    AA=C;DP=160     GT:GQ:DP        1|1:88:41       0|0:78:26       1|0:100:52
+2      99730771        rs6744510       A       C       .       PASS    AA=t;DP=130     GT:GQ:DP        1|1:89:28       1|1:100:32      1|1:100:71
+2      76347090        rs5010685       T       C       .       PASS    AA=C;DP=121     GT:GQ:DP        1|1:89:28       1|1:100:33      1|1:100:59
+6      25942637        rs1184803       T       C       .       PASS    AA=C;DP=120     GT:GQ:DP        1|1:89:28       1|1:100:34      1|1:100:59
+20     61822833        rs6062506       T       G       .       PASS    AA=T;DP=119     GT:GQ:DP        1|1:89:28       1|1:16:14       1|1:100:33
+1      11861453        rs2008113       A       G       .       PASS    AA=a;DP=110;HM2 GT:GQ:DP        1|1:89:28       1|1:16:8        1|1:100:72
+12     126820145       rs7962827       A       C       .       PASS    AA=A;DP=85      GT:GQ:DP        1|1:89:28       1|1:18:15       1|1:100:43
+1      170714206       rs6659116       A       G       .       PASS    AA=G;DP=118     GT:GQ:DP        1|1:89:28       1|1:21:21       1|1:100:68
+7      119921363       rs10274789      C       A       .       PASS    AA=A;DP=97      GT:GQ:DP        1|1:89:28       1|1:25:17       1|1:100:51
+6      164351038       rs206012        C       T       .       PASS    AA=C;DP=98      GT:GQ:DP        1|1:89:28       1|1:26:12       1|1:100:60
+20     60408945        rs7362041       A       G       .       PASS    AA=G;DP=97      GT:GQ:DP        1|1:89:28       1|1:29:8        1|1:100:60
+4      71305351        rs6600827       T       C       .       PASS    AA=C;DP=102     GT:GQ:DP        1|1:89:28       1|1:30:20       1|1:100:54
+19     5241661 rs4807712       T       C       .       PASS    AA=.;DP=96      GT:GQ:DP        1|1:89:28       1|1:32:10       1|1:100:49
+7      134089116       rs7781546       G       T       .       PASS    AA=T;DP=139     GT:GQ:DP        1|1:89:28       1|1:32:20       1|1:100:89
+10     80086485        rs1665563       T       C       .       PASS    AA=C;DP=115     GT:GQ:DP        1|1:89:28       1|1:32:9        1|1:100:77
+17     9845693 rs3786084       T       C       .       PASS    AA=T;DP=100     GT:GQ:DP        1|1:89:28       1|1:34:16       1|1:100:43
+8      122478487       rs13265508      C       A       .       PASS    AA=A;DP=80      GT:GQ:DP        1|1:89:28       1|1:35:10       1|1:100:38
+8      26920957        rs9657291       A       G       .       PASS    AA=G;DP=119     GT:GQ:DP        1|1:89:28       1|1:35:10       1|1:100:83
+4      181998160       rs4254820       T       C       .       PASS    AA=C;DP=99      GT:GQ:DP        1|1:89:28       1|1:35:21       1|1:100:49
+12     112962835       rs1003148       A       C       .       PASS    AA=C;DP=123     GT:GQ:DP        1|1:89:28       1|1:38:22       1|1:100:68
+3      58203479        .       T       A       .       PASS    AA=T;DP=89      GT:GQ:DP        1|1:89:28       1|1:39:16       1|1:100:44
+8      133445392       rs7843765       T       A       .       PASS    AA=A;DP=96      GT:GQ:DP        1|1:89:28       1|1:39:26       1|1:97:38
+17     8138388 rs6416894       T       C       .       PASS    AA=C;DP=95      GT:GQ:DP        1|1:89:28       1|1:41:12       1|1:100:54
+19     33583660        rs7246754       T       C       .       PASS    AA=T;DP=119     GT:GQ:DP        1|1:89:28       1|1:41:12       1|1:100:72
+17     27990396        rs2934233       G       A       .       PASS    AA=A;DP=94      GT:GQ:DP        1|1:89:28       1|1:44:13       1|1:100:54
+17     73807556        rs4789581       G       A       .       PASS    AA=A;DP=114     GT:GQ:DP        1|1:89:28       1|1:44:22       1|1:100:67
+1      101664149       rs12024787      C       T       .       PASS    AA=T;DP=83      GT:GQ:DP        1|1:89:28       1|1:45:20       1|1:100:28
+3      121118786       rs6792572       A       C       .       PASS    AA=C;DP=113     GT:GQ:DP        1|1:89:28       1|1:46:22       1|1:100:63
+19     4561238 rs7250560       A       G       .       PASS    AA=G;DP=103     GT:GQ:DP        1|1:89:28       1|1:47:14       1|1:100:58
+20     621640  rs6053991       T       C       .       PASS    AA=C;DP=113     GT:GQ:DP        1|1:89:28       1|1:47:15       1|1:100:68
+5      5333180 rs2913671       A       T       .       PASS    AA=T;DP=108     GT:GQ:DP        1|1:89:28       1|1:48:22       1|1:100:57
+17     66065798        rs350613        A       G       .       PASS    AA=G;DP=125     GT:GQ:DP        1|1:89:28       1|1:49:26       1|1:100:73
+9      80751335        rs9644975       A       G       .       PASS    AA=A;DP=95      GT:GQ:DP        1|1:89:28       1|1:50:15       1|1:100:51
+4      36221921        rs9968519       A       T       .       PASS    AA=T;DP=99      GT:GQ:DP        1|1:89:28       1|1:50:15       1|1:100:55
+15     98496271        rs899946        C       T       .       PASS    AA=T;DP=113     GT:GQ:DP        1|1:89:28       1|1:50:16       1|1:100:67
+11     77605643        rs2450135       A       G       .       PASS    AA=G;DP=112     GT:GQ:DP        1|1:89:28       1|1:50:16       1|1:100:68
+7      93194853        rs2519608       T       C       .       PASS    AA=C;DP=88      GT:GQ:DP        1|1:89:28       1|1:53:16       1|1:100:32
+4      180503638       rs6831521       C       T       .       PASS    AA=T;DP=91      GT:GQ:DP        1|1:89:28       1|1:53:16       1|1:100:50
+9      114351397       rs4978496       C       T       .       PASS    AA=C;DP=104     GT:GQ:DP        1|1:89:28       1|1:53:16       1|1:100:60
+20     17631973        rs6111622       A       G       .       PASS    AA=A;DP=110     GT:GQ:DP        1|1:89:28       1|1:53:16       1|1:100:68
+8      34115927        rs2643284       T       A       .       PASS    AA=A;DP=114     GT:GQ:DP        1|1:89:28       1|1:53:16       1|1:100:72
+5      99006111        rs9285876       T       A       .       PASS    AA=A;DP=103     GT:GQ:DP        1|1:89:28       1|1:53:17       1|1:100:58
+7      3097233 rs10276557      G       C       .       PASS    AA=C;DP=93      GT:GQ:DP        1|1:89:28       1|1:53:18       1|1:100:47
+11     107984033       rs11212733      T       A       .       PASS    AA=A;DP=114     GT:GQ:DP        1|1:89:28       1|1:53:18       1|1:100:68
+10     61310529        rs2440910       T       G       .       PASS    AA=T;DP=128     GT:GQ:DP        1|1:89:28       1|1:55:28       1|1:100:73
+6      7161246 rs2151942       C       T       .       PASS    AA=T;DP=109     GT:GQ:DP        1|1:89:28       1|1:56:17       1|1:100:56
+3      24924395        rs6772205       C       T       .       PASS    AA=T;DP=104     GT:GQ:DP        1|1:89:28       1|1:56:17       1|1:100:59
+17     14172719        rs726942        G       C       .       PASS    AA=C;DP=118     GT:GQ:DP        1|1:89:28       1|1:56:17       1|1:100:73
+15     40305429        rs4924633       C       T       .       PASS    AA=C;DP=115     GT:GQ:DP        1|1:89:28       1|1:56:17       1|1:100:74
+2      11297980        rs2357996       A       C       .       PASS    AA=C;DP=122     GT:GQ:DP        1|1:89:28       1|1:56:17       1|1:100:79
+20     19302089        rs6112331       T       A       .       PASS    AA=A;DP=127     GT:GQ:DP        1|1:89:28       1|1:56:17       1|1:100:79
+8      91023657        rs6470522       A       G       .       PASS    AA=G;DP=109     GT:GQ:DP        1|1:89:28       1|1:56:27       1|1:100:46
+14     31400543        rs1572190       T       A       .       PASS    AA=A;DP=97      GT:GQ:DP        1|1:89:28       1|1:58:20       1|1:100:49
+2      115128663       rs1369701       T       A       .       PASS    AA=A;DP=101     GT:GQ:DP        1|1:89:28       1|1:59:18       1|1:100:42
+1      34587344        rs1534034       A       G       .       PASS    AA=N;DP=98;HM2  GT:GQ:DP        1|1:89:28       1|1:59:18       1|1:100:52
+16     9878376 rs2267795       A       T       .       PASS    AA=T;DP=103     GT:GQ:DP        1|1:89:28       1|1:59:18       1|1:100:56
+9      114075686       rs10817308      C       T       .       PASS    AA=T;DP=105     GT:GQ:DP        1|1:89:28       1|1:59:18       1|1:100:58
+8      136685251       rs4909492       C       T       .       PASS    AA=T;DP=104     GT:GQ:DP        1|1:89:28       1|1:59:18       1|1:100:60
+2      204360509       rs10179483      G       A       .       PASS    AA=G;DP=116     GT:GQ:DP        1|1:89:28       1|1:59:18       1|1:100:70
+10     135034411       rs7894051       C       G       .       PASS    AA=.;DP=124     GT:GQ:DP        1|1:89:28       1|1:59:18       1|1:100:71
+4      10456264        rs13123303      G       A       .       PASS    AA=A;DP=117     GT:GQ:DP        1|1:89:28       1|1:59:18       1|1:100:72
+16     28038283        rs28620811      T       C       .       PASS    AA=C;DP=112     GT:GQ:DP        1|1:89:28       1|1:59:19       1|1:100:66
+8      8530042 rs2140245       T       C       .       PASS    AA=C;DP=121     GT:GQ:DP        1|1:89:28       1|1:59:19       1|1:100:75
+19     10633112        rs2043304       T       C       .       PASS    AA=t;DP=124     GT:GQ:DP        1|1:89:28       1|1:59:23       1|1:100:72
+20     11491692        rs6033180       T       C       .       PASS    AA=T;DP=131     GT:GQ:DP        1|1:89:28       1|1:60:30       1|1:100:73
+8      129085065       rs4733588       G       T       .       PASS    AA=T;DP=103     GT:GQ:DP        1|1:89:28       1|1:61:25       1|1:100:40
+14     66426315        rs6573732       A       T       .       PASS    AA=A;DP=92      GT:GQ:DP        1|1:89:28       1|1:62:19       1|1:100:29
+13     110112905       rs1853861       C       T       .       PASS    AA=T;DP=96      GT:GQ:DP        1|1:89:28       1|1:62:19       1|1:100:37
+1      225361191       rs2458523       A       G       .       PASS    AA=G;DP=98      GT:GQ:DP        1|1:89:28       1|1:62:19       1|1:100:40
+1      111334309       rs10745313      T       C       .       PASS    AA=t;DP=102     GT:GQ:DP        1|1:89:28       1|1:62:19       1|1:100:47
+8      116705894       rs2142331       C       T       .       PASS    AA=T;DP=94      GT:GQ:DP        1|1:89:28       1|1:62:19       1|1:100:47
+2      85301341        rs6547600       C       T       .       PASS    AA=T;DP=99      GT:GQ:DP        1|1:89:28       1|1:62:19       1|1:100:51
+2      150896015       rs2334314       C       T       .       PASS    AA=T;DP=107     GT:GQ:DP        1|1:89:28       1|1:62:19       1|1:100:56
+1      219607861       rs4846344       A       T       .       PASS    AA=T;DP=107;HM2 GT:GQ:DP        1|1:89:28       1|1:62:19       1|1:100:57
+5      150982994       rs4958470       T       C       .       PASS    AA=t;DP=111     GT:GQ:DP        1|1:89:28       1|1:62:19       1|1:100:65
+12     93665252        rs1836224       C       T       .       PASS    AA=C;DP=130     GT:GQ:DP        1|1:89:28       1|1:62:19       1|1:100:84
+12     19709722        rs11044748      A       C       .       PASS    AA=N;DP=113     GT:GQ:DP        1|1:89:28       1|1:62:20       1|1:100:65
+4      76650600        rs1841934       T       C       .       PASS    AA=C;DP=116     GT:GQ:DP        1|1:89:28       1|1:62:20       1|1:100:69
+X      2128793 rs3924294       A       G       .       PASS    AA=.;DP=87      GT:GQ:DP        1|1:89:28       1|1:62:21       1|1:100:34
+2      167300439       rs2655825       T       C       .       PASS    AA=C;DP=127     GT:GQ:DP        1|1:89:28       1|1:62:21       1|1:100:78
+17     30713427        rs4796076       G       A       .       PASS    AA=A;DP=91      GT:GQ:DP        1|1:89:28       1|1:65:20       1|1:100:33
+20     18274000        rs2424168       T       C       .       PASS    AA=T;DP=99      GT:GQ:DP        1|1:89:28       1|1:65:20       1|1:100:52
+1      164820562       rs60351099      A       G       .       PASS    AA=A;DP=104;HM2 GT:GQ:DP        1|1:89:28       1|1:65:20       1|1:100:57
+7      10048530        rs12386621      T       G       .       PASS    AA=T;DP=121     GT:GQ:DP        1|1:89:28       1|1:65:20       1|1:100:75
+3      184140675       rs9848209       C       G       .       PASS    AA=G;DP=87      GT:GQ:DP        1|1:89:28       1|1:65:21       1|1:100:28
+6      40611372        rs9471365       T       C       .       PASS    AA=C;DP=118     GT:GQ:DP        1|1:89:28       1|1:65:21       1|1:100:69
+2      229178060       rs6712197       A       G       .       PASS    AA=G;DP=121     GT:GQ:DP        1|1:89:28       1|1:68:21       1|1:100:68
+5      124795639       rs9686642       C       A       .       PASS    AA=C;DP=125     GT:GQ:DP        1|1:89:28       1|1:68:21       1|1:100:76
+5      56400664        rs864969        G       A       .       PASS    AA=A;DP=92      GT:GQ:DP        1|1:89:28       1|1:68:22       1|1:100:28
+17     48807348        rs7221962       G       A       .       PASS    AA=A;DP=109     GT:GQ:DP        1|1:89:28       1|1:68:22       1|1:100:60
+3      99267415        rs4550777       T       C       .       PASS    AA=.;DP=131     GT:GQ:DP        1|1:89:28       1|1:68:22       1|1:100:77
+15     67459997        rs1553502       A       G       .       PASS    AA=G;DP=129     GT:GQ:DP        1|1:89:28       1|1:68:22       1|1:100:80
+13     111000013       rs1163841       G       A       .       PASS    AA=G;DP=111     GT:GQ:DP        1|1:89:28       1|1:71:22       1|1:100:60
+4      166767053       rs1459506       A       G       .       PASS    AA=G;DP=109     GT:GQ:DP        1|1:89:28       1|1:71:22       1|1:100:60
+6      73706132        rs1317538       G       A       .       PASS    AA=A;DP=111     GT:GQ:DP        1|1:89:28       1|1:71:22       1|1:100:61
+10     75470170        rs10824060      G       C       .       PASS    AA=C;DP=123     GT:GQ:DP        1|1:89:28       1|1:71:22       1|1:100:75
+4      186028561       rs4861637       G       A       .       PASS    AA=A;DP=125     GT:GQ:DP        1|1:89:28       1|1:71:23       1|1:100:58
+11     45417945        rs1906585       T       C       .       PASS    AA=T;DP=112     GT:GQ:DP        1|1:89:28       1|1:71:23       1|1:100:64
+15     98760485        rs2439928       T       C       .       PASS    AA=C;DP=125     GT:GQ:DP        1|1:89:28       1|1:71:23       1|1:100:75
+5      57313279        rs9292147       A       G       .       PASS    AA=G;DP=134     GT:GQ:DP        1|1:89:28       1|1:71:24       1|1:100:35
+8      32665458        rs6988339       G       A       .       PASS    AA=A;DP=115     GT:GQ:DP        1|1:89:28       1|1:74:23       1|1:100:56
+15     74300608        rs2469571       G       A       .       PASS    AA=A;DP=108     GT:GQ:DP        1|1:89:28       1|1:74:23       1|1:100:59
+14     56141400        rs1959063       T       A       .       PASS    AA=A;DP=133     GT:GQ:DP        1|1:89:28       1|1:74:23       1|1:100:73
+7      15430100        rs4499985       T       C       .       PASS    AA=C;DP=99      GT:GQ:DP        1|1:89:28       1|1:74:24       1|1:100:47
+3      53858324        rs1561303       T       C       .       PASS    AA=C;DP=107     GT:GQ:DP        1|1:89:28       1|1:74:24       1|1:100:55
+4      144236365       rs7696633       T       C       .       PASS    AA=T;DP=109     GT:GQ:DP        1|1:89:28       1|1:74:24       1|1:100:57
+6      145232252       rs6939038       A       G       .       PASS    AA=A;DP=112     GT:GQ:DP        1|1:89:28       1|1:74:24       1|1:100:60
+12     111763107       rs1029487       T       G       .       PASS    AA=G;DP=127     GT:GQ:DP        1|1:89:28       1|1:74:25       1|1:100:74
+9      110463509       rs1319976       A       G       .       PASS    AA=a;DP=127     GT:GQ:DP        1|1:89:28       1|1:74:25       1|1:100:76
+2      184619960       rs1358092       G       A       .       PASS    AA=G;DP=95      GT:GQ:DP        1|1:89:28       1|1:77:24       1|1:100:36
+3      120598754       rs9846036       A       C       .       PASS    AA=C;DP=111     GT:GQ:DP        1|1:89:28       1|1:77:24       1|1:100:52
+12     73807454        rs6582278       A       T       .       PASS    AA=T;DP=110     GT:GQ:DP        1|1:89:28       1|1:77:24       1|1:100:58
+19     47023832        rs1870092       T       C       .       PASS    AA=t;DP=110     GT:GQ:DP        1|1:89:28       1|1:77:24       1|1:100:58
+3      189237916       rs3864102       T       C       .       PASS    AA=C;DP=110     GT:GQ:DP        1|1:89:28       1|1:77:24       1|1:100:59
+17     39267550        rs1237669       T       G       .       PASS    AA=G;DP=130     GT:GQ:DP        1|1:89:28       1|1:77:24       1|1:100:79
+18     62094682        rs4891837       T       C       .       PASS    AA=C;DP=119     GT:GQ:DP        1|1:89:28       1|1:77:26       1|1:100:52
+7      114385499       rs2709502       T       A       .       PASS    AA=A;DP=103     GT:GQ:DP        1|1:89:28       1|1:80:25       1|1:100:51
+15     34829853        rs1452919       C       T       .       PASS    AA=T;DP=103     GT:GQ:DP        1|1:89:28       1|1:80:25       1|1:100:52
+4      57597518        rs1277311       C       T       .       PASS    AA=C;DP=124     GT:GQ:DP        1|1:89:28       1|1:80:25       1|1:100:72
+4      112081741       rs1547934       C       T       .       PASS    AA=C;DP=122     GT:GQ:DP        1|1:89:28       1|1:80:26       1|1:100:65
+19     33545841        rs758313        A       C       .       PASS    AA=C;DP=129     GT:GQ:DP        1|1:89:28       1|1:80:26       1|1:100:77
+7      78801709        rs7811833       A       C       .       PASS    AA=C;DP=101     GT:GQ:DP        1|1:89:28       1|1:83:26       1|1:100:48
+4      145608404       rs62343635      G       A       .       PASS    AA=A;DP=129     GT:GQ:DP        1|1:89:28       1|1:83:26       1|1:100:72
+5      173199313       rs2659189       G       A       .       PASS    AA=A;DP=116     GT:GQ:DP        1|1:89:28       1|1:83:27       1|1:100:61
+5      56114416        rs9283717       G       A       .       PASS    AA=A;DP=129     GT:GQ:DP        1|1:89:28       1|1:83:27       1|1:100:65
+7      104032843       rs7801040       T       A       .       PASS    AA=A;DP=91      GT:GQ:DP        1|1:89:28       1|1:86:27       1|1:100:31
+15     91874069        rs10520733      C       A       .       PASS    AA=C;DP=123     GT:GQ:DP        1|1:89:28       1|1:86:27       1|1:100:60
+5      106877573       rs152555        G       A       .       PASS    AA=A;DP=117     GT:GQ:DP        1|1:89:28       1|1:86:27       1|1:100:62
+4      19106573        rs4346638       G       A       .       PASS    AA=A;DP=126     GT:GQ:DP        1|1:89:28       1|1:86:27       1|1:100:72
+13     47485371        rs2182377       A       C       .       PASS    AA=C;DP=115     GT:GQ:DP        1|1:89:28       1|1:88:38       1|1:100:48
+2      236623279       rs10194403      A       G       .       PASS    AA=A;DP=112     GT:GQ:DP        1|1:89:28       1|1:89:28       1|1:100:44
+4      63306444        rs4340822       C       T       .       PASS    AA=T;DP=119     GT:GQ:DP        1|1:89:28       1|1:89:28       1|1:100:62
+9      119789202       rs2722804       T       C       .       PASS    AA=C;DP=144     GT:GQ:DP        1|1:89:28       1|1:89:28       1|1:100:87
+12     125892888       rs7958965       A       G       .       PASS    AA=G;DP=113     GT:GQ:DP        1|1:89:28       1|1:89:29       1|1:100:58
+12     87289   rs10774454      A       G       .       PASS    AA=G;DP=122     GT:GQ:DP        1|1:89:28       1|1:92:29       1|1:100:67
+9      13561933        rs9969775       C       A       .       PASS    AA=c;DP=132     GT:GQ:DP        1|1:89:28       1|1:92:29       1|1:100:70
+9      110507132       rs1556949       G       C       .       PASS    AA=C;DP=131     GT:GQ:DP        1|1:89:28       1|1:92:30       1|1:100:73
+4      43349605        rs10938298      A       G       .       PASS    AA=A;DP=108     GT:GQ:DP        1|1:89:28       1|1:95:30       1|1:100:49
+18     26374716        rs2585701       T       A       .       PASS    AA=A;DP=114     GT:GQ:DP        1|1:89:28       1|1:98:31       1|1:100:54
+3      122346648       rs2331538       C       A       .       PASS    AA=A;DP=106     GT:GQ:DP        1|1:89:29       1|1:100:34      1|1:100:32
+8      31944823        rs327415        T       C       .       PASS    AA=C;DP=97      GT:GQ:DP        1|1:89:29       1|1:20:7        1|1:100:58
+2      172955717       rs9752420       C       G       .       PASS    AA=G;DP=87      GT:GQ:DP        1|1:89:29       1|1:21:16       1|1:100:37
+22     36498454        rs762984        T       C       .       PASS    AA=N;DP=100     GT:GQ:DP        1|1:89:29       1|1:26:12       1|1:100:60
+10     14673030        rs4750535       C       T       .       PASS    AA=T;DP=83      GT:GQ:DP        1|1:89:29       1|1:27:20       1|1:77:28
+21     37579364        rs34739542      T       A       .       PASS    AA=T;DP=96      GT:GQ:DP        1|1:89:29       1|1:35:10       1|1:100:57
+3      9525048 rs2648424       T       C       .       PASS    AA=T;DP=100     GT:GQ:DP        1|1:89:29       1|1:35:10       1|1:100:62
+11     76538607        rs12283584      C       T       .       PASS    AA=T;DP=108     GT:GQ:DP        1|1:89:29       1|1:35:10       1|1:100:68
+17     37122351        rs7225040       A       G       .       PASS    AA=G;DP=108     GT:GQ:DP        1|1:89:29       1|1:35:11       1|1:100:68
+2      95379468        rs1862897       T       C       .       PASS    AA=C;DP=114     GT:GQ:DP        1|1:89:29       1|1:37:14       1|1:100:71
+14     39393070        rs933038        G       A       .       PASS    AA=A;DP=121     GT:GQ:DP        1|1:89:29       1|1:37:21       1|1:100:72
+4      5203307 rs35131014      A       T       .       PASS    AA=T;DP=112     GT:GQ:DP        1|1:89:29       1|1:38:20       1|1:100:63
+5      34990345        rs37437 T       C       .       PASS    AA=C;DP=113     GT:GQ:DP        1|1:89:29       1|1:39:16       1|1:100:67
+11     304207  rs9667990       C       G       .       PASS    AA=g;DP=95      GT:GQ:DP        1|1:89:29       1|1:41:12       1|1:100:53
+13     112610560       rs2152930       T       C       .       PASS    AA=C;DP=97      GT:GQ:DP        1|1:89:29       1|1:44:13       1|1:100:45
+1      8458405 rs4351668       C       T       .       PASS    AA=C;DP=107     GT:GQ:DP        1|1:89:29       1|1:44:13       1|1:100:63
+12     34461978        rs11519125      T       C       .       PASS    AA=.;DP=87      GT:GQ:DP        1|1:89:29       1|1:44:14       1|1:100:44
+17     873490  rs2663343       G       A       .       PASS    AA=A;DP=103     GT:GQ:DP        1|1:89:29       1|1:44:14       1|1:100:61
+8      6329962 rs1867395       G       A       .       PASS    AA=A;DP=99      GT:GQ:DP        1|1:89:29       1|1:46:25       1|1:100:39
+2      172300190       rs6709156       T       C       .       PASS    AA=T;DP=110     GT:GQ:DP        1|1:89:29       1|1:49:20       1|1:100:56
+1      33063964        rs3845500       G       A       .       PASS    AA=A;DP=100;HM2;HM3     GT:GQ:DP        1|1:89:29       1|1:50:15       1|1:100:45
+4      36032565        rs6828326       T       C       .       PASS    AA=C;DP=99      GT:GQ:DP        1|1:89:29       1|1:53:16       1|1:100:54
+16     77184946        rs2459106       A       T       .       PASS    AA=T;DP=109     GT:GQ:DP        1|1:89:29       1|1:53:17       1|1:100:63
+3      51201669        rs4528983       G       A       .       PASS    AA=A;DP=107     GT:GQ:DP        1|1:89:29       1|1:54:22       1|1:100:56
+6      98780880        rs680574        A       G       .       PASS    AA=G;DP=101     GT:GQ:DP        1|1:89:29       1|1:56:18       1|1:100:55
+1      8140138 rs11121120      G       C       .       PASS    AA=C;DP=93;HM2  GT:GQ:DP        1|1:89:29       1|1:59:18       1|1:100:47
+16     77871336        rs906797        T       C       .       PASS    AA=C;DP=106     GT:GQ:DP        1|1:89:29       1|1:59:18       1|1:100:56
+13     46389553        rs7337602       G       A       .       PASS    AA=N;DP=115     GT:GQ:DP        1|1:89:29       1|1:59:18       1|1:100:64
+16     53579066        rs7196347       G       T       .       PASS    AA=T;DP=119     GT:GQ:DP        1|1:89:29       1|1:59:19       1|1:100:72
+7      7542187 rs13438746      T       C       .       PASS    AA=T;DP=123     GT:GQ:DP        1|1:89:29       1|1:59:21       1|1:100:73
+5      71465993        rs4463167       T       C       .       PASS    AA=C;DP=111     GT:GQ:DP        1|1:89:29       1|1:60:24       1|1:100:58
+11     126200142       rs4402300       T       G       .       PASS    AA=C;DP=114     GT:GQ:DP        1|1:89:29       1|1:62:19       1|1:100:65
+16     12198332        rs12445778      T       C       .       PASS    AA=C;DP=111     GT:GQ:DP        1|1:89:29       1|1:62:22       1|1:100:60
+1      188159339       rs1711757       T       A       .       PASS    AA=A;DP=103;HM2 GT:GQ:DP        1|1:89:29       1|1:65:20       1|1:100:58
+20     53143117        rs6014266       T       C       .       PASS    AA=C;DP=121     GT:GQ:DP        1|1:89:29       1|1:65:20       1|1:100:70
+3      164235174       rs4446233       T       C       .       PASS    AA=C;DP=101     GT:GQ:DP        1|1:89:29       1|1:65:21       1|1:100:49
+6      163372792       rs1853486       A       G       .       PASS    AA=A;DP=111     GT:GQ:DP        1|1:89:29       1|1:65:21       1|1:100:62
+16     84332037        rs397492        G       A       .       PASS    AA=A;DP=120     GT:GQ:DP        1|1:89:29       1|1:65:21       1|1:100:70
+3      56591660        rs959492        G       A       .       PASS    AA=N;DP=101     GT:GQ:DP        1|1:89:29       1|1:68:21       1|1:100:52
+8      15161941        rs2410245       C       G       .       PASS    AA=G;DP=90      GT:GQ:DP        1|1:89:29       1|1:68:22       1|1:100:32
+4      131847760       rs13140191      C       T       .       PASS    AA=T;DP=121     GT:GQ:DP        1|1:89:29       1|1:68:22       1|1:100:71
+2      108432720       rs2460945       A       G       .       PASS    AA=G;DP=108     GT:GQ:DP        1|1:89:29       1|1:69:25       1|1:100:56
+5      39122109        rs452039        C       G       .       PASS    AA=G;DP=141     GT:GQ:DP        1|1:89:29       1|1:69:33       1|1:100:78
+4      165441421       rs6829588       G       T       .       PASS    AA=T;DP=133     GT:GQ:DP        1|1:89:29       1|1:71:22       1|1:100:80
+20     30830740        rs1569686       G       T       .       PASS    AA=T;DP=128     GT:GQ:DP        1|1:89:29       1|1:71:23       1|1:100:75
+5      150554825       rs248448        A       G       .       PASS    AA=A;DP=116     GT:GQ:DP        1|1:89:29       1|1:72:25       1|1:100:61
+8      131852851       rs7007094       A       T       .       PASS    AA=T;DP=117     GT:GQ:DP        1|1:89:29       1|1:74:24       1|1:100:60
+9      7401116 rs2997583       C       G       .       PASS    AA=G;DP=109     GT:GQ:DP        1|1:89:29       1|1:74:25       1|1:100:56
+7      42127253        rs846397        A       G       .       PASS    AA=G;DP=116     GT:GQ:DP        1|1:89:29       1|1:74:25       1|1:100:64
+6      7551254 rs2757597       G       A       .       PASS    AA=A;DP=126     GT:GQ:DP        1|1:89:29       1|1:77:25       1|1:100:74
+5      40153867        rs6451479       C       T       .       PASS    AA=C;DP=106     GT:GQ:DP        1|1:89:29       1|1:80:25       1|1:100:37
+7      18297505        rs1015088       G       A       .       PASS    AA=A;DP=98      GT:GQ:DP        1|1:89:29       1|1:80:25       1|1:100:44
+7      27352462        rs6978314       G       A       .       PASS    AA=A;DP=101     GT:GQ:DP        1|1:89:29       1|1:80:25       1|1:100:47
+18     69718990        rs930134        A       G       .       PASS    AA=G;DP=129     GT:GQ:DP        1|1:89:29       1|1:80:25       1|1:100:76
+6      140292985       rs586246        T       C       .       PASS    AA=C;DP=108     GT:GQ:DP        1|1:89:29       1|1:80:27       1|1:100:52
+10     9074868 rs7921685       G       C       .       PASS    AA=c;DP=128     GT:GQ:DP        1|1:89:29       1|1:80:28       1|1:100:33
+8      129802483       rs10091202      A       G       .       PASS    AA=G;DP=105     GT:GQ:DP        1|1:89:29       1|1:83:26       1|1:100:48
+8      102686914       rs7820410       T       C       .       PASS    AA=C;DP=112     GT:GQ:DP        1|1:89:29       1|1:86:28       1|1:100:54
+3      329290  rs2648465       A       G       .       PASS    AA=G;DP=123     GT:GQ:DP        1|1:89:29       1|1:95:30       1|1:100:60
+4      47765612        rs6830656       G       A       .       PASS    AA=A;DP=151     GT:GQ:DP        1|1:89:29       1|1:98:32       1|1:100:83
+11     82917320        rs7122339       A       G       .       PASS    AA=G;DP=137     GT:GQ:DP        1|1:89:30       1|1:100:34      1|1:100:76
+19     58358959        rs6509728       G       A       .       PASS    AA=g;DP=142     GT:GQ:DP        1|1:89:30       1|1:100:35      1|1:100:77
+17     76425839        rs2589144       T       C       .       PASS    AA=C;DP=99      GT:GQ:DP        1|1:89:30       1|1:29:13       1|1:100:44
+1      3189859 rs2500302       T       C       .       PASS    AA=C;DP=99;HM2  GT:GQ:DP        1|1:89:30       1|1:41:12       1|1:100:57
+7      89779004        rs6948214       A       T       .       PASS    AA=T;DP=105     GT:GQ:DP        1|1:89:30       1|1:44:13       1|1:100:63
+7      157643166       rs10261447      C       G       .       PASS    AA=G;DP=112     GT:GQ:DP        1|1:89:30       1|1:47:14       1|1:100:66
+2      71615262        rs10187787      T       C       .       PASS    AA=T;DP=104     GT:GQ:DP        1|1:89:30       1|1:47:16       1|1:100:59
+8      13842376        rs2682665       C       T       .       PASS    AA=C;DP=116     GT:GQ:DP        1|1:89:30       1|1:47:21       1|1:100:64
+10     123904789       rs6585796       G       C       .       PASS    AA=C;DP=130     GT:GQ:DP        1|1:89:30       1|1:50:15       1|1:100:84
+1      225544160       rs7540155       A       G       .       PASS    AA=G;DP=110;HM2 GT:GQ:DP        1|1:89:30       1|1:53:16       1|1:100:64
+21     39495950        rs13050583      C       T       .       PASS    AA=T;DP=105     GT:GQ:DP        1|1:89:30       1|1:56:17       1|1:100:54
+7      20190955        rs3095221       T       C       .       PASS    AA=C;DP=106     GT:GQ:DP        1|1:89:30       1|1:74:24       1|1:100:54
+6      119045431       rs11153763      G       A       .       PASS    AA=G;DP=134     GT:GQ:DP        1|1:89:30       1|1:86:28       1|1:100:74
+2      219989260       rs3755056       T       A       .       PASS    AA=G;DP=111     GT:GQ:DP        1|1:89:31       0|0:5:11        1|0:100:70
+1      242974672       rs10803244      G       A       .       PASS    AA=A;DP=101;HM2 GT:GQ:DP        1|1:89:31       1|1:59:18       1|1:100:52
+16     22625900        rs31965 T       C       .       PASS    AA=T;DP=134     GT:GQ:DP        1|1:89:31       1|1:86:28       1|1:100:74
+7      23403106        rs12667185      A       G       .       PASS    AA=A;DP=131     GT:GQ:DP        1|1:89:33       0|1:100:19      1|0:100:79
+17     27868707        rs11658204      A       G       .       PASS    AA=G;DP=107     GT:GQ:DP        1|1:89:33       1|1:47:16       1|1:100:44
+2      240575461       rs7570794       C       T       .       PASS    AA=T;DP=111     GT:GQ:DP        1|1:89:33       1|1:56:21       1|1:100:47
+8      43224609        rs10110087      T       G       .       PASS    AA=G;DP=97      GT:GQ:DP        1|1:89:34       1|1:30:15       1|1:100:47
+3      54510628        rs7616017       T       C       .       PASS    AA=C;DP=89      GT:GQ:DP        1|1:89:34       1|1:53:18       1|1:100:30
+1      204392948       rs28452187      C       T       .       PASS    AA=C;DP=116     GT:GQ:DP        1|1:89:35       1|1:65:22       1|1:100:59
+1      145523848       rs614502        G       T       .       PASS    AA=t;DP=153;HM2;HM3     GT:GQ:DP        1|1:89:36       1|0:100:28      1|1:100:88
+4      6182713 rs4580721       G       A       .       PASS    AA=A;DP=143     GT:GQ:DP        1|1:89:38       1|1:65:20       1|1:100:83
+6      138458811       rs2484066       T       G       .       PASS    AA=T;DP=129     GT:GQ:DP        1|1:89:40       1|1:100:33      1|1:100:46
+10     12264493        rs7900356       A       G       .       PASS    AA=G;DP=137     GT:GQ:DP        1|1:89:40       1|1:48:21       1|1:100:76
+1      94623163        rs1765618       T       C       .       PASS    AA=C;DP=115;HM2;HM3     GT:GQ:DP        1|1:89:41       1|1:53:18       1|1:100:45
+12     117862704       rs1534172       T       C       .       PASS    AA=C;DP=97      GT:GQ:DP        1|1:8:20        0|1:57:22       1|0:100:43
+7      151096634       rs10257872      T       C       .       PASS    AA=T;DP=102     GT:GQ:DP        1|1:8:24        0|1:58:18       1|0:100:60
+X      135666121       .       T       C       .       PASS    AA=T;DP=93      GT:GQ:DP        1|1:8:4 0|0:63:22       1|0:100:32
+X      100731405       .       G       T       .       PASS    AA=G;DP=78      GT:GQ:DP        1|1:8:9 0|0:39:13       1|0:100:28
+7      1470146 .       T       C       .       PASS    AA=C;DP=100     GT:GQ:DP        1|1:90:30       1|0:100:12      1|1:100:48
+15     21766760        rs28633845      C       G       .       PASS    AA=.;DP=93      GT:GQ:DP        1|1:90:30       1|0:100:15      1|1:100:38
+5      139670152       rs7717563       A       G       .       PASS    AA=G;DP=103     GT:GQ:DP        1|1:90:30       1|0:100:16      1|1:100:56
+9      18141987        rs1537136       G       A       .       PASS    AA=A;DP=106     GT:GQ:DP        1|1:90:30       1|0:100:16      1|1:100:61
+2      166824022       rs4491742       C       T       .       PASS    AA=T;DP=116     GT:GQ:DP        1|1:90:30       1|0:100:16      1|1:100:66
+3      6976961 rs13321431      T       G       .       PASS    AA=G;DP=93      GT:GQ:DP        1|1:90:30       1|0:100:18      1|1:100:34
+17     2421679 rs7209945       A       G       .       PASS    AA=G;DP=115     GT:GQ:DP        1|1:90:30       1|0:100:19      1|1:100:67
+16     83369462        rs774306        G       A       .       PASS    AA=A;DP=118     GT:GQ:DP        1|1:90:30       1|0:100:19      1|1:100:69
+6      26752904        rs2498343       G       A       .       PASS    AA=a;DP=86      GT:GQ:DP        1|1:90:30       1|0:100:19      1|1:84:28
+4      61086315        rs10517503      C       G       .       PASS    AA=G;DP=109     GT:GQ:DP        1|1:90:30       1|0:100:23      1|1:100:59
+3      8225186 rs9883008       G       A       .       PASS    AA=G;DP=126     GT:GQ:DP        1|1:90:30       1|0:100:23      1|1:100:73
+13     43300132        rs9525851       T       A       .       PASS    AA=T;DP=114     GT:GQ:DP        1|1:90:30       1|0:100:24      1|1:100:60
+11     130507445       rs10750463      C       T       .       PASS    AA=C;DP=146     GT:GQ:DP        1|1:90:30       1|0:100:24      1|1:100:94
+14     23657385        rs2277481       A       G       .       PASS    AA=G;DP=137     GT:GQ:DP        1|1:90:30       1|0:100:26      1|1:100:79
+15     37815707        rs7165067       G       A       .       PASS    AA=A;DP=126     GT:GQ:DP        1|1:90:30       1|0:100:28      1|1:100:68
+4      131564539       rs6855545       T       G       .       PASS    AA=g;DP=104     GT:GQ:DP        1|1:90:30       1|0:100:29      1|1:92:46
+15     91013218        rs380184        C       T       .       PASS    AA=C;DP=121     GT:GQ:DP        1|1:90:30       1|0:100:30      1|1:100:58
+11     77205809        rs4945220       C       G       .       PASS    AA=G;DP=121     GT:GQ:DP        1|1:90:30       1|0:100:30      1|1:100:64
+1      223070388       rs10915722      G       A       .       PASS    AA=A;DP=127;HM2 GT:GQ:DP        1|1:90:30       1|0:100:30      1|1:100:67
+10     68609647        rs1904633       G       A       .       PASS    AA=A;DP=141     GT:GQ:DP        1|1:90:30       1|0:100:41      1|1:100:70
+5      59138031        rs2963824       T       C       .       PASS    AA=C;DP=121     GT:GQ:DP        1|1:90:30       1|0:22:22       1|1:100:70
+17     54562322        rs12051897      G       A       .       PASS    AA=N;DP=113     GT:GQ:DP        1|1:90:30       1|0:57:24       1|1:100:58
+11     81202684        rs7109633       C       A       .       PASS    AA=c;DP=113     GT:GQ:DP        1|1:90:30       1|0:62:20       1|1:100:63
+2      232922922       rs883434        G       C       .       PASS    AA=N;DP=106     GT:GQ:DP        1|1:90:30       1|0:64:15       1|1:100:61
+1      47435014        rs4926513       A       G       .       PASS    AA=G;DP=113;HM3 GT:GQ:DP        1|1:90:30       1|0:70:12       1|1:100:72
+22     26550269        rs6005645       T       A       .       PASS    AA=A;DP=172     GT:GQ:DP        1|1:90:30       1|0:70:21       1|1:100:74
+6      3312868 rs979307        C       T       .       PASS    AA=C;DP=139     GT:GQ:DP        1|1:90:30       1|0:83:20       1|1:100:87
+2      102714289       rs2732824       A       G       .       PASS    AA=A;DP=105     GT:GQ:DP        1|1:90:30       1|0:89:11       1|1:100:64
+20     4455971 rs6116401       C       G       .       PASS    AA=C;DP=127     GT:GQ:DP        1|1:90:30       1|0:95:23       1|1:100:62
+4      1266349 rs12502916      G       A       .       PASS    AA=A;DP=128     GT:GQ:DP        1|1:90:31       0|1:100:15      1|0:100:84
+4      84041358        rs982146        G       A       .       PASS    AA=G;DP=134     GT:GQ:DP        1|1:90:31       0|1:100:15      1|0:100:88
+7      3883879 rs6970116       G       A       .       PASS    AA=g;DP=115     GT:GQ:DP        1|1:90:31       0|1:100:16      1|0:100:69
+8      26146725        rs4466404       A       G       .       PASS    AA=a;DP=148     GT:GQ:DP        1|1:90:31       0|1:100:19      1|0:100:51
+7      104538655       rs2299299       C       T       .       PASS    AA=T;DP=114     GT:GQ:DP        1|1:90:31       0|1:100:19      1|0:100:68
+2      216495183       rs10932634      T       C       .       PASS    AA=C;DP=133     GT:GQ:DP        1|1:90:31       0|1:100:23      1|0:100:80
+8      55407691        rs2889135       G       C       .       PASS    AA=G;DP=128     GT:GQ:DP        1|1:90:31       0|1:100:24      1|0:100:73
+7      2479968 rs2969071       G       A       .       PASS    AA=G;DP=139     GT:GQ:DP        1|1:90:31       0|1:100:25      1|0:100:42
+4      158931548       .       A       G       .       PASS    AA=A;DP=122     GT:GQ:DP        1|1:90:31       0|1:100:25      1|0:100:66
+2      172079170       rs6711792       C       G       .       PASS    AA=G;DP=127     GT:GQ:DP        1|1:90:31       0|1:100:26      1|0:100:70
+4      42446263        rs6849498       C       T       .       PASS    AA=C;DP=146     GT:GQ:DP        1|1:90:31       0|1:100:26      1|0:100:91
+15     57405714        rs7162847       C       T       .       PASS    AA=T;DP=130     GT:GQ:DP        1|1:90:31       0|1:100:27      1|0:100:73
+2      175734172       rs1194217       C       T       .       PASS    AA=T;DP=113     GT:GQ:DP        1|1:90:31       0|1:100:28      1|0:100:54
+10     20617418        rs2297490       C       T       .       PASS    AA=T;DP=123     GT:GQ:DP        1|1:90:31       0|1:100:28      1|0:100:64
+8      70164551        rs2472131       A       T       .       PASS    AA=A;DP=134     GT:GQ:DP        1|1:90:31       0|1:100:28      1|0:100:76
+18     8790830 rs488168        A       G       .       PASS    AA=G;DP=151     GT:GQ:DP        1|1:90:31       0|1:100:29      1|0:100:50
+5      165068772       rs262738        G       A       .       PASS    AA=G;DP=137     GT:GQ:DP        1|1:90:31       0|1:100:30      1|0:100:75
+16     77375785        rs7191931       C       T       .       PASS    AA=C;DP=125     GT:GQ:DP        1|1:90:31       0|1:100:32      1|0:100:65
+6      8401777 rs6908504       A       G       .       PASS    AA=A;DP=128     GT:GQ:DP        1|1:90:31       0|1:25:24       1|0:100:72
+12     9823891 rs10772138      G       C       .       PASS    AA=C;DP=132     GT:GQ:DP        1|1:90:31       0|1:42:27       1|0:100:70
+18     52469840        rs501415        A       G       .       PASS    AA=a;DP=96      GT:GQ:DP        1|1:90:31       0|1:45:8        1|0:100:43
+19     46614192        rs4803468       A       G       .       PASS    AA=G;DP=132     GT:GQ:DP        1|1:90:31       0|1:52:13       1|0:100:90
+6      34640955        rs4713817       G       A       .       PASS    AA=G;DP=123     GT:GQ:DP        1|1:90:31       0|1:63:14       1|0:100:80
+10     5924522 rs7913215       T       A       .       PASS    AA=A;DP=118     GT:GQ:DP        1|1:90:31       0|1:68:14       1|0:100:75
+8      66331116        rs7005537       T       A       .       PASS    AA=T;DP=104     GT:GQ:DP        1|1:90:31       0|1:72:11       1|0:100:64
+2      218577787       rs41366647      T       C       .       PASS    AA=C;DP=143     GT:GQ:DP        1|1:90:31       0|1:82:21       1|0:100:93
+6      8383260 rs4960412       G       C       .       PASS    AA=G;DP=129     GT:GQ:DP        1|1:90:31       0|1:84:24       1|0:100:74
+5      158790051       rs7702534       T       G       .       PASS    AA=G;DP=110     GT:GQ:DP        1|1:90:31       0|1:85:21       1|0:100:55
+5      118027024       rs2115735       T       C       .       PASS    AA=T;DP=109     GT:GQ:DP        1|1:90:31       0|1:87:18       1|0:100:48
+10     6730153 rs1475418       T       C       .       PASS    AA=N;DP=113     GT:GQ:DP        1|1:90:31       0|1:88:13       1|0:100:69
+17     35362079        rs7223318       G       C       .       PASS    AA=G;DP=130     GT:GQ:DP        1|1:90:31       0|1:88:21       1|0:100:78
+7      152226740       rs10256342      G       T       .       PASS    AA=T;DP=113     GT:GQ:DP        1|1:90:31       0|1:89:18       1|0:100:62
+8      40494337        rs28416319      C       T       .       PASS    AA=C;DP=153     GT:GQ:DP        1|1:90:31       0|1:89:29       1|0:100:49
+12     127243583       .       T       C       .       PASS    AA=N;DP=102     GT:GQ:DP        1|1:90:31       1|0:100:19      1|1:100:53
+19     16513059        .       G       A       .       PASS    AA=G;DP=131     GT:GQ:DP        1|1:90:31       1|0:100:20      1|1:100:37
+5      26368104        .       A       G       .       PASS    AA=A;DP=111     GT:GQ:DP        1|1:90:31       1|0:100:20      1|1:100:60
+12     30793022        rs10771765      A       G       .       PASS    AA=A;DP=110     GT:GQ:DP        1|1:90:31       1|0:100:25      1|1:100:41
+14     25200200        rs12432441      T       A       .       PASS    AA=A;DP=126     GT:GQ:DP        1|1:90:31       1|0:100:25      1|1:100:74
+2      64672368        rs3770720       T       C       .       PASS    AA=C;DP=133     GT:GQ:DP        1|1:90:31       1|0:100:26      1|1:100:75
+20     15477724        rs1233723       T       C       .       PASS    AA=C;DP=131     GT:GQ:DP        1|1:90:31       1|0:100:27      1|1:100:65
+1      216970980       rs1031960       T       C       .       PASS    AA=C;DP=125;HM2;HM3     GT:GQ:DP        1|1:90:31       1|0:100:29      1|1:100:59
+1      241934455       rs320342        T       C       .       PASS    AA=C;DP=139;HM3 GT:GQ:DP        1|1:90:31       1|0:100:32      1|1:100:74
+3      61537054        rs13061182      C       T       .       PASS    AA=C;DP=133     GT:GQ:DP        1|1:90:31       1|0:100:33      1|1:100:69
+3      183168338       rs4855066       T       A       .       PASS    AA=A;DP=138     GT:GQ:DP        1|1:90:31       1|0:100:37      1|1:100:73
+7      12138608        rs11770347      T       G       .       PASS    AA=G;DP=101     GT:GQ:DP        1|1:90:31       1|0:28:14       1|1:100:56
+1      36974356        rs10796891      G       A       .       PASS    AA=G;DP=100;HM2;HM3     GT:GQ:DP        1|1:90:31       1|0:33:14       1|1:100:55
+21     38168966        rs7278259       G       A       .       PASS    AA=A;DP=138     GT:GQ:DP        1|1:90:31       1|0:94:29       1|1:100:39
+8      67613738        rs4463406       A       G       .       PASS    AA=G;DP=131     GT:GQ:DP        1|1:90:32       0|1:100:19      1|0:100:81
+12     43720290        rs59211662      T       C       .       PASS    AA=T;DP=129     GT:GQ:DP        1|1:90:32       0|1:100:24      1|0:100:68
+3      150665867       rs9790309       G       A       .       PASS    AA=A;DP=136     GT:GQ:DP        1|1:90:32       0|1:100:24      1|0:100:73
+3      197835307       rs1825471       G       A       .       PASS    AA=A;DP=131     GT:GQ:DP        1|1:90:32       0|1:100:24      1|0:100:76
+4      57051729        rs17086883      C       T       .       PASS    AA=T;DP=106     GT:GQ:DP        1|1:90:32       0|1:100:26      1|0:100:37
+4      122731981       rs726128        C       A       .       PASS    AA=A;DP=137     GT:GQ:DP        1|1:90:32       0|1:100:26      1|0:100:83
+6      42613081        rs9367151       A       C       .       PASS    AA=C;DP=134     GT:GQ:DP        1|1:90:32       0|1:100:29      1|0:100:73
+18     50289186        rs1893525       G       A       .       PASS    AA=A;DP=137     GT:GQ:DP        1|1:90:32       0|1:100:29      1|0:100:78
+1      115036533       rs2010899       C       A       .       PASS    AA=A;DP=132;HM2;HM3     GT:GQ:DP        1|1:90:32       0|1:100:32      1|0:100:70
+4      149385211       rs3846320       A       G       .       PASS    AA=G;DP=162     GT:GQ:DP        1|1:90:32       0|1:100:35      1|0:100:41
+4      172601926       rs3913766       A       G       .       PASS    AA=A;DP=93      GT:GQ:DP        1|1:90:32       0|1:70:12       1|0:100:47
+17     18140113        .       A       C       .       PASS    AA=a;DP=105     GT:GQ:DP        1|1:90:32       0|1:77:18       1|0:100:56
+8      77360462        rs6998867       C       T       .       PASS    AA=c;DP=98      GT:GQ:DP        1|1:90:32       0|1:79:13       1|0:100:51
+16     10655455        rs12149568      A       C       .       PASS    AA=C;DP=137     GT:GQ:DP        1|1:90:32       0|1:80:19       1|0:100:85
+5      52925424        rs2637003       A       G       .       PASS    AA=A;DP=104     GT:GQ:DP        1|1:90:32       1|0:100:18      1|1:100:50
+9      136350967       rs944860        C       G       .       PASS    AA=N;DP=107     GT:GQ:DP        1|1:90:32       1|0:100:18      1|1:100:58
+2      201440362       rs3888610       C       T       .       PASS    AA=T;DP=122     GT:GQ:DP        1|1:90:32       1|0:100:37      1|1:100:53
+1      6568454 rs6682920       G       A       .       PASS    AA=G;DP=117;HM2 GT:GQ:DP        1|1:90:32       1|0:49:11       1|1:100:72
+1      198595740       rs2808497       G       C       .       PASS    AA=C;DP=110;HM2 GT:GQ:DP        1|1:90:33       0|1:100:21      1|0:100:56
+14     50223760        rs3015473       A       G       .       PASS    AA=G;DP=124     GT:GQ:DP        1|1:90:33       0|1:100:23      1|0:100:68
+4      185814866       rs11930666      C       T       .       PASS    AA=T;DP=115     GT:GQ:DP        1|1:90:33       0|1:100:24      1|0:100:54
+1      58235986        rs1797144       T       C       .       PASS    AA=C;DP=116;HM2;HM3     GT:GQ:DP        1|1:90:33       0|1:100:25      1|0:100:56
+6      139763535       rs11155061      G       A       .       PASS    AA=A;DP=137     GT:GQ:DP        1|1:90:33       0|1:100:32      1|0:100:69
+3      124213600       rs9868873       G       A       .       PASS    AA=A;DP=119     GT:GQ:DP        1|1:90:33       0|1:79:19       1|0:100:64
+3      27060062        rs7648437       G       A       .       PASS    AA=G;DP=101     GT:GQ:DP        1|1:90:33       0|1:81:24       1|0:100:37
+20     15350820        rs727246        C       T       .       PASS    AA=T;DP=109     GT:GQ:DP        1|1:90:33       1|0:100:25      1|1:100:52
+8      125746186       rs4870916       C       T       .       PASS    AA=T;DP=119     GT:GQ:DP        1|1:90:33       1|0:35:23       1|1:100:63
+10     77350616        rs6480795       C       T       .       PASS    AA=T;DP=140     GT:GQ:DP        1|1:90:33       1|0:89:26       1|1:100:82
+10     90402171        rs814635        C       T       .       PASS    AA=T;DP=114     GT:GQ:DP        1|1:90:33       1|1:74:24       1|1:100:57
+12     130022191       rs4759532       G       A       .       PASS    AA=G;DP=128     GT:GQ:DP        1|1:90:34       0|1:100:18      1|0:100:78
+16     949823  rs59802517      C       T       .       PASS    AA=c;DP=120     GT:GQ:DP        1|1:90:34       0|1:5:11        1|0:100:76
+12     1018095 rs2369494       C       T       .       PASS    AA=T;DP=115     GT:GQ:DP        1|1:90:34       1|1:54:18       1|1:100:64
+3      177987891       rs6443373       A       G       .       PASS    AA=G;DP=121     GT:GQ:DP        1|1:90:35       1|1:83:27       1|1:100:48
+11     101354200       rs3740931       A       G       .       PASS    AA=G;DP=118     GT:GQ:DP        1|1:90:36       1|0:100:26      1|1:100:55
+15     89886415        rs6496822       C       T       .       PASS    AA=T;DP=111     GT:GQ:DP        1|1:90:36       1|1:77:25       1|1:100:42
+17     6955055 rs11659039      C       T       .       PASS    AA=C;DP=154     GT:GQ:DP        1|1:90:37       0|1:100:23      1|0:100:53
+15     84209246        rs4843126       T       A       .       PASS    AA=A;DP=117     GT:GQ:DP        1|1:90:37       1|1:80:25       1|1:100:55
+4      47870189        rs2704433       A       G       .       PASS    AA=G;DP=135     GT:GQ:DP        1|1:90:38       1|1:65:21       1|1:100:78
+12     29779964        rs302372        C       A       .       PASS    AA=A;DP=131     GT:GQ:DP        1|1:90:38       1|1:77:25       1|1:100:69
+17     61237811        rs6504359       T       C       .       PASS    AA=T;DP=147     GT:GQ:DP        1|1:90:39       0|1:100:29      1|0:100:78
+3      17893047        rs2337386       C       G       .       PASS    AA=G;DP=104     GT:GQ:DP        1|1:90:39       1|0:91:22       1|1:93:32
+6      150588606       rs57976502      G       T       .       PASS    AA=G;DP=150     GT:GQ:DP        1|1:90:40       1|1:87:39       1|1:100:71
+20     51942251        rs11905597      G       A       .       PASS    AA=A;DP=155     GT:GQ:DP        1|1:90:43       0|1:100:26      1|0:100:46
+6      16063666        rs7752521       C       A       .       PASS    AA=A;DP=159     GT:GQ:DP        1|1:90:43       0|1:96:18       1|0:100:59
+13     80464242        rs7318963       A       C       .       PASS    AA=T;DP=114     GT:GQ:DP        1|1:91:29       1|1:11:24       1|1:100:60
+13     111755900       rs2147142       T       C       .       PASS    AA=C;DP=87      GT:GQ:DP        1|1:91:29       1|1:13:12       1|1:100:40
+11     5546214 rs7108944       T       G       .       PASS    AA=T;DP=148     GT:GQ:DP        1|1:91:32       0|0:100:35      1|0:100:37
+21     17687790        rs9976678       A       G       .       PASS    AA=A;DP=149     GT:GQ:DP        1|1:91:32       0|0:100:38      1|0:100:37
+4      14913449        rs4073390       A       G       .       PASS    AA=G;DP=143     GT:GQ:DP        1|1:91:32       0|0:100:39      1|0:100:74
+10     19797653        rs7087294       T       G       .       PASS    AA=T;DP=105     GT:GQ:DP        1|1:91:32       0|0:13:15       1|0:100:59
+4      156529177       rs11937216      C       A       .       PASS    AA=A;DP=135     GT:GQ:DP        1|1:91:32       0|0:15:18       1|0:100:87
+4      17695343        rs924786        A       C       .       PASS    AA=A;DP=115     GT:GQ:DP        1|1:91:32       0|0:44:26       1|0:100:56
+17     3489032 rs56831513      G       C       .       PASS    AA=G;DP=100     GT:GQ:DP        1|1:91:32       0|0:45:15       1|0:100:55
+16     85881561        .       C       A       .       PASS    AA=c;DP=116     GT:GQ:DP        1|1:91:32       0|0:45:16       1|0:100:67
+2      53442268        rs11125485      A       T       .       PASS    AA=-;DP=116     GT:GQ:DP        1|1:91:32       0|0:47:27       1|0:100:57
+2      2907938 rs59745050      C       T       .       PASS    AA=C;DP=114     GT:GQ:DP        1|1:91:32       0|0:48:17       1|0:100:66
+20     40245663        rs6093586       C       T       .       PASS    AA=C;DP=107     GT:GQ:DP        1|1:91:32       0|0:51:18       1|0:100:52
+3      41352377        rs901688        A       G       .       PASS    AA=A;DP=123     GT:GQ:DP        1|1:91:32       0|0:51:18       1|0:100:69
+1      6693727 rs277670        T       C       .       PASS    AA=N;DP=93;HM2;HM3      GT:GQ:DP        1|1:91:32       0|0:54:18       1|0:100:43
+2      173261720       rs11898565      G       A       .       PASS    AA=G;DP=131     GT:GQ:DP        1|1:91:32       0|0:54:18       1|0:100:81
+18     9580742 .       C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        1|1:91:32       0|0:54:19       1|0:100:67
+9      87777628        .       C       G       .       PASS    AA=C;DP=141     GT:GQ:DP        1|1:91:32       0|0:57:19       1|0:100:47
+1      178056683       .       C       T       .       PASS    AA=T;DP=144     GT:GQ:DP        1|1:91:32       0|0:57:19       1|0:100:51
+7      139004376       rs4130471       T       C       .       PASS    AA=C;DP=121     GT:GQ:DP        1|1:91:32       0|0:57:20       1|0:100:67
+16     81785744        rs12102970      C       T       .       PASS    AA=T;DP=111     GT:GQ:DP        1|1:91:32       0|0:60:20       1|0:100:60
+11     85176599        rs7938187       A       G       .       PASS    AA=A;DP=125     GT:GQ:DP        1|1:91:32       0|0:60:21       1|0:100:72
+8      2367488 rs10109720      G       A       .       PASS    AA=g;DP=151     GT:GQ:DP        1|1:91:32       0|0:61:32       1|0:100:82
+10     33099591        rs7915385       G       A       .       PASS    AA=g;DP=130     GT:GQ:DP        1|1:91:32       0|0:62:26       1|0:100:70
+9      78953773        rs7854824       C       T       .       PASS    AA=C;DP=117     GT:GQ:DP        1|1:91:32       0|0:63:21       1|0:100:64
+15     20617108        rs7177677       G       A       .       PASS    AA=G;DP=148     GT:GQ:DP        1|1:91:32       0|0:63:21       1|0:100:92
+16     2328643 rs35510516      T       G       .       PASS    AA=T;DP=153     GT:GQ:DP        1|1:91:32       0|0:66:22       1|0:100:52
+4      123790425       rs35901455      G       T       .       PASS    AA=T;DP=107     GT:GQ:DP        1|1:91:32       0|0:66:22       1|0:100:53
+5      54698090        rs10040104      T       C       .       PASS    AA=T;DP=126     GT:GQ:DP        1|1:91:32       0|0:66:22       1|0:100:75
+17     70406966        .       C       T       .       PASS    AA=C;DP=143     GT:GQ:DP        1|1:91:32       0|0:69:23       1|0:100:91
+3      15285612        rs6792120       G       A       .       PASS    AA=G;DP=130     GT:GQ:DP        1|1:91:32       0|0:93:31       1|0:100:68
+8      133134063       rs7836704       G       A       .       PASS    AA=A;DP=139     GT:GQ:DP        1|1:91:32       0|0:96:33       1|0:100:75
+7      116706147       rs733154        A       G       .       PASS    AA=A;DP=146     GT:GQ:DP        1|1:91:32       0|0:96:34       1|0:100:81
+8      143114241       rs4917227       A       G       .       PASS    AA=A;DP=114     GT:GQ:DP        1|1:91:33       0|0:46:21       1|0:100:63
+10     101380480       rs1541598       G       A       .       PASS    AA=G;DP=145     GT:GQ:DP        1|1:91:33       0|0:75:27       1|0:100:86
+19     11571309        rs9807915       T       C       .       PASS    AA=C;DP=160     GT:GQ:DP        1|1:91:33       0|0:84:28       1|0:100:53
+16     82190334        rs1833966       G       C       .       PASS    AA=C;DP=160     GT:GQ:DP        1|1:91:33       0|0:84:30       1|0:100:95
+4      148596273       rs4835404       C       G       .       PASS    AA=C;DP=143     GT:GQ:DP        1|1:91:33       0|0:90:30       1|0:100:85
+8      61429920        rs6471870       A       G       .       PASS    AA=G;DP=79      GT:GQ:DP        1|1:91:33       1|1:10:9        1|1:66:30
+12     124365511       rs10846870      G       A       .       PASS    AA=g;DP=143     GT:GQ:DP        1|1:91:34       0|0:51:17       1|0:100:48
+2      101065616       rs11678957      A       G       .       PASS    AA=a;DP=118     GT:GQ:DP        1|1:91:34       0|0:60:20       1|0:100:64
+21     34054961        rs2834259       C       T       .       PASS    AA=C;DP=151     GT:GQ:DP        1|1:91:34       0|0:66:26       1|0:100:91
+17     24211915        rs6803  C       T       .       PASS    AA=C;DP=146     GT:GQ:DP        1|1:91:34       0|0:69:23       1|0:100:89
+10     61177109        rs59884290      C       G       .       PASS    AA=C;DP=138     GT:GQ:DP        1|1:91:34       0|0:72:24       1|0:100:80
+8      141862574       .       T       C       .       PASS    AA=T;DP=145     GT:GQ:DP        1|1:91:34       0|0:78:26       1|0:100:45
+18     9395388 rs8098555       T       C       .       PASS    AA=C;DP=115     GT:GQ:DP        1|1:91:34       1|1:50:16       1|1:100:66
+11     55425219        rs7120843       A       G       .       PASS    AA=a;DP=104     GT:GQ:DP        1|1:91:35       0|0:57:19       1|0:100:51
+16     54631310        rs4784624       C       T       .       PASS    AA=C;DP=113     GT:GQ:DP        1|1:91:35       1|0:100:26      1|1:100:53
+11     84848781        rs286513        A       C       .       PASS    AA=C;DP=104     GT:GQ:DP        1|1:91:35       1|1:44:13       1|1:100:44
+16     64414885        rs28098 T       C       .       PASS    AA=C;DP=128     GT:GQ:DP        1|1:91:35       1|1:77:26       1|1:100:64
+11     78628427        rs511903        G       T       .       PASS    AA=T;DP=144     GT:GQ:DP        1|1:91:36       1|1:98:33       1|1:100:79
+3      50800250        rs2675805       T       A       .       PASS    AA=A;DP=145     GT:GQ:DP        1|1:91:37       1|1:69:27       1|1:100:84
+1      67696979        rs1340589       A       G       .       PASS    AA=G;DP=146;HM2;HM3     GT:GQ:DP        1|1:91:41       1|0:100:32      1|1:100:72
+2      221163182       rs938731        C       T       .       PASS    AA=c;DP=122     GT:GQ:DP        1|1:92:29       1|1:100:33      1|1:100:62
+6      38358758        rs4711531       A       G       .       PASS    AA=A;DP=153     GT:GQ:DP        1|1:92:29       1|1:100:33      1|1:100:92
+1      31008523        rs4949294       G       T       .       PASS    AA=T;DP=155;HM2;HM3     GT:GQ:DP        1|1:92:29       1|1:100:33      1|1:100:93
+8      57623780        rs2610027       T       G       .       PASS    AA=G;DP=117     GT:GQ:DP        1|1:92:29       1|1:100:35      1|1:100:40
+7      147445123       rs1859539       G       A       .       PASS    AA=A;DP=142     GT:GQ:DP        1|1:92:29       1|1:100:35      1|1:100:77
+6      116270470       rs544347        G       T       .       PASS    AA=T;DP=118     GT:GQ:DP        1|1:92:29       1|1:20:19       1|1:100:71
+4      34153770        rs57339789      C       G       .       PASS    AA=G;DP=104     GT:GQ:DP        1|1:92:29       1|1:27:18       1|1:100:58
+12     26457026        rs10743583      T       C       .       PASS    AA=C;DP=95      GT:GQ:DP        1|1:92:29       1|1:29:8        1|1:100:56
+6      110461257       rs6920677       A       G       .       PASS    AA=G;DP=85      GT:GQ:DP        1|1:92:29       1|1:32:9        1|1:100:43
+3      11010710        rs2930137       T       G       .       PASS    AA=G;DP=117     GT:GQ:DP        1|1:92:29       1|1:34:16       1|1:100:70
+18     74207800        rs581423        G       C       .       PASS    AA=C;DP=124     GT:GQ:DP        1|1:92:29       1|1:35:21       1|1:100:74
+18     50909254        rs8084253       T       G       .       PASS    AA=G;DP=115     GT:GQ:DP        1|1:92:29       1|1:36:28       1|1:100:58
+10     36800069        rs2505619       C       T       .       PASS    AA=.;DP=101     GT:GQ:DP        1|1:92:29       1|1:37:16       1|1:100:56
+13     72051977        rs1556817       G       A       .       PASS    AA=a;DP=115     GT:GQ:DP        1|1:92:29       1|1:38:22       1|1:100:67
+3      1871366 rs2727939       A       C       .       PASS    AA=a;DP=113     GT:GQ:DP        1|1:92:29       1|1:40:18       1|1:100:67
+14     39600177        rs2415581       T       G       .       PASS    AA=G;DP=90      GT:GQ:DP        1|1:92:29       1|1:40:23       1|1:100:32
+16     50558550        rs11076245      A       G       .       PASS    AA=G;DP=100     GT:GQ:DP        1|1:92:29       1|1:41:12       1|1:100:50
+4      1469361 rs11248076      C       G       .       PASS    AA=-;DP=100     GT:GQ:DP        1|1:92:29       1|1:41:12       1|1:100:60
+2      186272195       rs10803990      T       A       .       PASS    AA=A;DP=123     GT:GQ:DP        1|1:92:29       1|1:41:12       1|1:100:78
+3      86080430        rs9309997       T       A       .       PASS    AA=T;DP=75      GT:GQ:DP        1|1:92:29       1|1:41:12       1|1:87:21
+3      21481544        rs151278        T       C       .       PASS    AA=C;DP=113     GT:GQ:DP        1|1:92:29       1|1:41:23       1|1:100:59
+2      134903510       rs562534        C       T       .       PASS    AA=T;DP=143     GT:GQ:DP        1|1:92:29       1|1:44:13       1|1:100:50
+19     44337190        rs692257        T       C       .       PASS    AA=C;DP=108     GT:GQ:DP        1|1:92:29       1|1:44:14       1|1:100:62
+8      24991133        rs7828177       A       G       .       PASS    AA=G;DP=110     GT:GQ:DP        1|1:92:29       1|1:46:19       1|1:100:63
+18     13553635        rs1785164       A       G       .       PASS    AA=G;DP=123     GT:GQ:DP        1|1:92:29       1|1:46:25       1|1:100:68
+20     53805214        rs6014500       A       C       .       PASS    AA=C;DP=97      GT:GQ:DP        1|1:92:29       1|1:47:14       1|1:100:54
+17     30982535        rs225260        T       C       .       PASS    AA=C;DP=93      GT:GQ:DP        1|1:92:29       1|1:47:15       1|1:100:48
+7      63778726        rs6965811       A       G       .       PASS    AA=N;DP=105     GT:GQ:DP        1|1:92:29       1|1:47:15       1|1:100:62
+11     35046920        rs675970        A       G       .       PASS    AA=G;DP=117     GT:GQ:DP        1|1:92:29       1|1:47:15       1|1:100:75
+9      138184412       rs1621735       A       G       .       PASS    AA=G;DP=106     GT:GQ:DP        1|1:92:29       1|1:47:16       1|1:100:64
+6      29885086        rs1632974       T       C       .       PASS    AA=.;DP=118     GT:GQ:DP        1|1:92:29       1|1:47:16       1|1:100:70
+4      163486993       rs12508097      C       T       .       PASS    AA=c;DP=102     GT:GQ:DP        1|1:92:29       1|1:47:18       1|1:100:54
+10     85437192        rs7905007       T       G       .       PASS    AA=G;DP=93      GT:GQ:DP        1|1:92:29       1|1:48:17       1|1:100:46
+7      122410269       rs1204020       A       G       .       PASS    AA=a;DP=104     GT:GQ:DP        1|1:92:29       1|1:50:15       1|1:100:54
+16     57827566        rs1000102       T       C       .       PASS    AA=C;DP=114     GT:GQ:DP        1|1:92:29       1|1:50:15       1|1:100:70
+19     14427235        rs11673477      A       G       .       PASS    AA=a;DP=101     GT:GQ:DP        1|1:92:29       1|1:50:16       1|1:100:45
+5      166241447       rs4460157       C       T       .       PASS    AA=T;DP=94      GT:GQ:DP        1|1:92:29       1|1:50:16       1|1:100:50
+5      99476510        rs10070280      T       C       .       PASS    AA=C;DP=103     GT:GQ:DP        1|1:92:29       1|1:50:16       1|1:100:57
+10     68556464        rs7074592       A       G       .       PASS    AA=G;DP=119     GT:GQ:DP        1|1:92:29       1|1:50:25       1|1:100:65
+15     30004979        rs953326        T       C       .       PASS    AA=C;DP=101     GT:GQ:DP        1|1:92:29       1|1:51:25       1|1:100:38
+17     29186815        rs317325        C       T       .       PASS    AA=T;DP=143     GT:GQ:DP        1|1:92:29       1|1:52:27       1|1:100:86
+15     65835996        rs8042233       C       T       .       PASS    AA=T;DP=76      GT:GQ:DP        1|1:92:29       1|1:53:16       1|1:100:24
+3      144353831       rs6777051       A       G       .       PASS    AA=G;DP=98      GT:GQ:DP        1|1:92:29       1|1:53:16       1|1:100:39
+1      60891938        rs554692        G       T       .       PASS    AA=T;DP=109;HM2 GT:GQ:DP        1|1:92:29       1|1:53:16       1|1:100:63
+20     12743400        rs1237439       C       T       .       PASS    AA=T;DP=108     GT:GQ:DP        1|1:92:29       1|1:53:16       1|1:100:65
+16     84695713        rs9938790       C       G       .       PASS    AA=G;DP=117     GT:GQ:DP        1|1:92:29       1|1:53:16       1|1:100:72
+11     131070786       rs867933        A       G       .       PASS    AA=A;DP=118     GT:GQ:DP        1|1:92:29       1|1:53:16       1|1:100:73
+6      10957768        rs4711106       T       C       .       PASS    AA=C;DP=134     GT:GQ:DP        1|1:92:29       1|1:53:17       1|1:100:45
+2      208742044       rs4589738       A       G       .       PASS    AA=N;DP=104     GT:GQ:DP        1|1:92:29       1|1:53:17       1|1:100:59
+4      15586670        rs11734657      T       C       .       PASS    AA=N;DP=118     GT:GQ:DP        1|1:92:29       1|1:53:17       1|1:100:76
+9      28263678        rs10733430      C       T       .       PASS    AA=T;DP=117     GT:GQ:DP        1|1:92:29       1|1:53:18       1|1:100:71
+11     126715088       rs2618211       G       A       .       PASS    AA=G;DP=111     GT:GQ:DP        1|1:92:29       1|1:53:21       1|1:100:60
+5      64309204        rs2968203       C       A       .       PASS    AA=A;DP=103     GT:GQ:DP        1|1:92:29       1|1:54:23       1|1:100:50
+14     61792989        rs1533358       C       T       .       PASS    AA=C;DP=116     GT:GQ:DP        1|1:92:29       1|1:55:23       1|1:100:63
+10     125200512       rs705133        A       G       .       PASS    AA=G;DP=118     GT:GQ:DP        1|1:92:29       1|1:55:28       1|1:100:61
+15     71221709        rs4777592       A       C       .       PASS    AA=C;DP=119     GT:GQ:DP        1|1:92:29       1|1:55:28       1|1:100:65
+1      193452046       rs10921817      A       C       .       PASS    AA=C;DP=134;HM2;HM3     GT:GQ:DP        1|1:92:29       1|1:55:28       1|1:100:74
+4      10094085        rs6835433       A       C       .       PASS    AA=A;DP=124     GT:GQ:DP        1|1:92:29       1|1:55:30       1|1:100:65
+8      133787730       rs3892734       A       G       .       PASS    AA=G;DP=101     GT:GQ:DP        1|1:92:29       1|1:56:17       1|1:100:56
+16     49630634        rs6416793       T       C       .       PASS    AA=C;DP=116     GT:GQ:DP        1|1:92:29       1|1:56:17       1|1:100:62
+13     97345312        rs7996672       A       C       .       PASS    AA=C;DP=112     GT:GQ:DP        1|1:92:29       1|1:56:17       1|1:100:66
+15     53069362        rs1728848       C       T       .       PASS    AA=T;DP=116     GT:GQ:DP        1|1:92:29       1|1:56:17       1|1:100:68
+8      30138669        rs7836454       T       C       .       PASS    AA=C;DP=118     GT:GQ:DP        1|1:92:29       1|1:56:17       1|1:100:72
+20     43988093        rs4810480       G       T       .       PASS    AA=T;DP=121     GT:GQ:DP        1|1:92:29       1|1:56:17       1|1:100:76
+2      79009543        rs4455186       C       T       .       PASS    AA=T;DP=102     GT:GQ:DP        1|1:92:29       1|1:57:23       1|1:100:50
+9      35984731        rs1535911       G       A       .       PASS    AA=-;DP=90      GT:GQ:DP        1|1:92:29       1|1:59:18       1|1:100:28
+1      99994892        rs2788506       T       A       .       PASS    AA=A;DP=90;HM2  GT:GQ:DP        1|1:92:29       1|1:59:18       1|1:100:43
+15     94394338        rs12914967      T       C       .       PASS    AA=T;DP=114     GT:GQ:DP        1|1:92:29       1|1:59:18       1|1:100:69
+5      178828971       rs1319926       A       T       .       PASS    AA=T;DP=125     GT:GQ:DP        1|1:92:29       1|1:59:18       1|1:100:79
+9      74317350        rs7044235       A       G       .       PASS    AA=A;DP=96      GT:GQ:DP        1|1:92:29       1|1:59:19       1|1:100:48
+18     67442332        rs9965165       C       T       .       PASS    AA=c;DP=111     GT:GQ:DP        1|1:92:29       1|1:59:20       1|1:100:63
+10     51890426        rs1810576       C       T       .       PASS    AA=T;DP=154     GT:GQ:DP        1|1:92:29       1|1:59:25       1|1:100:98
+12     24659461        rs1386641       C       A       .       PASS    AA=A;DP=101     GT:GQ:DP        1|1:92:29       1|1:62:19       1|1:100:50
+4      142635833       rs34585213      G       A       .       PASS    AA=A;DP=100     GT:GQ:DP        1|1:92:29       1|1:62:19       1|1:100:52
+8      29816924        rs6985017       T       C       .       PASS    AA=C;DP=104     GT:GQ:DP        1|1:92:29       1|1:62:19       1|1:100:54
+2      119076061       rs538554        A       G       .       PASS    AA=G;DP=110     GT:GQ:DP        1|1:92:29       1|1:62:19       1|1:100:61
+4      23657809        rs625365        T       C       .       PASS    AA=C;DP=118     GT:GQ:DP        1|1:92:29       1|1:62:19       1|1:100:70
+10     89876184        rs7069053       T       C       .       PASS    AA=C;DP=119     GT:GQ:DP        1|1:92:29       1|1:62:19       1|1:100:72
+5      136878828       rs7708199       A       G       .       PASS    AA=G;DP=139     GT:GQ:DP        1|1:92:29       1|1:62:19       1|1:100:92
+17     65585914        rs2886631       C       G       .       PASS    AA=C;DP=98      GT:GQ:DP        1|1:92:29       1|1:62:20       1|1:100:49
+7      31411938        rs7780061       G       A       .       PASS    AA=G;DP=118     GT:GQ:DP        1|1:92:29       1|1:62:20       1|1:100:65
+17     25503925        rs8081389       G       A       .       PASS    AA=A;DP=129     GT:GQ:DP        1|1:92:29       1|1:62:21       1|1:100:37
+8      82601598        rs4144766       G       A       .       PASS    AA=A;DP=100     GT:GQ:DP        1|1:92:29       1|1:62:21       1|1:100:51
+6      107975655       rs6901330       C       T       .       PASS    AA=T;DP=125     GT:GQ:DP        1|1:92:29       1|1:63:25       1|1:100:70
+2      63377541        rs9967684       G       A       .       PASS    AA=N;DP=109     GT:GQ:DP        1|1:92:29       1|1:64:27       1|1:100:51
+2      212773795       rs1467274       G       A       .       PASS    AA=A;DP=86      GT:GQ:DP        1|1:92:29       1|1:65:20       1|1:100:25
+19     15650257        rs34521056      T       C       .       PASS    AA=T;DP=94      GT:GQ:DP        1|1:92:29       1|1:65:20       1|1:100:40
+8      111125990       rs6469293       G       A       .       PASS    AA=A;DP=105     GT:GQ:DP        1|1:92:29       1|1:65:20       1|1:100:52
+8      108712454       rs431433        G       A       .       PASS    AA=G;DP=102     GT:GQ:DP        1|1:92:29       1|1:65:20       1|1:100:53
+2      35180510        rs6724523       A       G       .       PASS    AA=G;DP=104     GT:GQ:DP        1|1:92:29       1|1:65:20       1|1:100:54
+6      161847758       rs4709533       G       A       .       PASS    AA=G;DP=117     GT:GQ:DP        1|1:92:29       1|1:65:20       1|1:100:67
+14     70151270        rs6573974       T       A       .       PASS    AA=A;DP=118     GT:GQ:DP        1|1:92:29       1|1:65:21       1|1:100:67
+7      39943483        rs773391        C       T       .       PASS    AA=T;DP=128     GT:GQ:DP        1|1:92:29       1|1:65:21       1|1:100:75
+16     34243426        rs2631001       T       A       .       PASS    AA=.;DP=120     GT:GQ:DP        1|1:92:29       1|1:65:22       1|1:100:69
+19     15728305        rs9653164       T       C       .       PASS    AA=t;DP=97      GT:GQ:DP        1|1:92:29       1|1:66:32       1|1:100:27
+2      157275384       rs1564081       G       A       .       PASS    AA=A;DP=96      GT:GQ:DP        1|1:92:29       1|1:68:21       1|1:100:47
+1      77569001        rs7531411       C       T       .       PASS    AA=T;DP=103;HM2;HM3     GT:GQ:DP        1|1:92:29       1|1:68:21       1|1:100:52
+2      81281586        rs6724708       C       T       .       PASS    AA=T;DP=107     GT:GQ:DP        1|1:92:29       1|1:68:21       1|1:100:58
+18     19621630        rs11872306      G       A       .       PASS    AA=A;DP=111     GT:GQ:DP        1|1:92:29       1|1:68:21       1|1:100:59
+4      35548040        rs3906661       T       A       .       PASS    AA=A;DP=114     GT:GQ:DP        1|1:92:29       1|1:68:21       1|1:100:68
+1      41097493        rs11209038      A       G       .       PASS    AA=G;DP=138     GT:GQ:DP        1|1:92:29       1|1:68:21       1|1:100:89
+18     9866574 rs507916        A       G       .       PASS    AA=G;DP=98      GT:GQ:DP        1|1:92:29       1|1:68:22       1|1:100:41
+4      5765970 rs1545788       C       G       .       PASS    AA=C;DP=113     GT:GQ:DP        1|1:92:29       1|1:68:22       1|1:100:50
+5      116573009       rs2172793       T       G       .       PASS    AA=G;DP=106     GT:GQ:DP        1|1:92:29       1|1:68:22       1|1:100:57
+14     25014203        rs17094599      G       C       .       PASS    AA=G;DP=103     GT:GQ:DP        1|1:92:29       1|1:68:23       1|1:100:51
+15     52806450        rs2414375       G       A       .       PASS    AA=G;DP=120     GT:GQ:DP        1|1:92:29       1|1:68:25       1|1:100:54
+11     41022682        rs355219        A       G       .       PASS    AA=G;DP=131     GT:GQ:DP        1|1:92:29       1|1:71:22       1|1:100:73
+13     64237931        rs595704        T       C       .       PASS    AA=C;DP=125     GT:GQ:DP        1|1:92:29       1|1:71:22       1|1:100:73
+9      1946595 rs4430142       G       C       .       PASS    AA=C;DP=112     GT:GQ:DP        1|1:92:29       1|1:71:23       1|1:100:60
+6      91315409        rs157687        C       T       .       PASS    AA=T;DP=128     GT:GQ:DP        1|1:92:29       1|1:71:23       1|1:100:77
+2      148314689       rs12989087      G       C       .       PASS    AA=C;DP=110     GT:GQ:DP        1|1:92:29       1|1:74:23       1|1:100:57
+12     43970581        rs7953360       A       C       .       PASS    AA=c;DP=113     GT:GQ:DP        1|1:92:29       1|1:74:23       1|1:100:58
+5      35903813        rs1494557       C       G       .       PASS    AA=G;DP=125     GT:GQ:DP        1|1:92:29       1|1:74:24       1|1:100:56
+1      103360000       rs10747438      G       A       .       PASS    AA=A;DP=111;HM2;HM3     GT:GQ:DP        1|1:92:29       1|1:74:24       1|1:100:60
+1      230963917       rs4649404       A       G       .       PASS    AA=A;DP=113     GT:GQ:DP        1|1:92:29       1|1:74:24       1|1:100:62
+11     9851666 rs10840314      C       T       .       PASS    AA=T;DP=123     GT:GQ:DP        1|1:92:29       1|1:74:24       1|1:100:70
+1      41774117        rs639298        T       C       .       PASS    AA=T;DP=144;HM2;HM3     GT:GQ:DP        1|1:92:29       1|1:74:24       1|1:100:94
+6      55726231        rs7752893       A       G       .       PASS    AA=G;DP=101     GT:GQ:DP        1|1:92:29       1|1:74:25       1|1:100:47
+6      84949774        rs12527719      G       A       .       PASS    AA=A;DP=134     GT:GQ:DP        1|1:92:29       1|1:75:25       1|1:100:45
+4      3008213 rs1557213       A       G       .       PASS    AA=G;DP=117     GT:GQ:DP        1|1:92:29       1|1:77:24       1|1:100:57
+17     51498347        rs752614        A       G       .       PASS    AA=G;DP=118     GT:GQ:DP        1|1:92:29       1|1:77:24       1|1:100:65
+1      230003748       rs2759352       G       A       .       PASS    AA=A;DP=125     GT:GQ:DP        1|1:92:29       1|1:77:24       1|1:100:72
+14     36454858        rs712397        T       C       .       PASS    AA=T;DP=125     GT:GQ:DP        1|1:92:29       1|1:77:24       1|1:100:72
+15     95424028        rs28522113      C       T       .       PASS    AA=T;DP=128     GT:GQ:DP        1|1:92:29       1|1:77:24       1|1:100:78
+1      216188969       rs11117986      C       T       .       PASS    AA=T;DP=117     GT:GQ:DP        1|1:92:29       1|1:77:25       1|1:100:64
+7      108956775       rs1721471       T       C       .       PASS    AA=C;DP=130     GT:GQ:DP        1|1:92:29       1|1:77:25       1|1:100:78
+4      148957140       rs6535562       T       C       .       PASS    AA=T;DP=141     GT:GQ:DP        1|1:92:29       1|1:77:32       1|1:100:75
+4      142100509       rs10003541      G       T       .       PASS    AA=T;DP=125     GT:GQ:DP        1|1:92:29       1|1:78:25       1|1:100:72
+4      11850587        rs7685119       G       A       .       PASS    AA=A;DP=109     GT:GQ:DP        1|1:92:29       1|1:80:25       1|1:100:39
+6      4847984 rs2875964       A       G       .       PASS    AA=G;DP=103     GT:GQ:DP        1|1:92:29       1|1:80:25       1|1:100:49
+13     77492590        rs4332645       T       C       .       PASS    AA=G;DP=104     GT:GQ:DP        1|1:92:29       1|1:80:25       1|1:100:50
+9      102457170       rs4742788       C       T       .       PASS    AA=T;DP=118     GT:GQ:DP        1|1:92:29       1|1:80:25       1|1:100:65
+5      81961476        rs2385878       A       T       .       PASS    AA=T;DP=128     GT:GQ:DP        1|1:92:29       1|1:80:25       1|1:100:75
+3      107721256       rs2712487       T       C       .       PASS    AA=C;DP=144     GT:GQ:DP        1|1:92:29       1|1:80:25       1|1:100:84
+17     31051720        rs2626625       C       G       .       PASS    AA=G;DP=129     GT:GQ:DP        1|1:92:29       1|1:80:26       1|1:100:71
+6      29533987        rs3117194       T       C       .       PASS    AA=C;DP=125     GT:GQ:DP        1|1:92:29       1|1:80:27       1|1:100:69
+19     13465414        rs4926294       T       G       .       PASS    AA=T;DP=133     GT:GQ:DP        1|1:92:29       1|1:81:31       1|1:100:71
+5      173934045       rs6883505       A       T       .       PASS    AA=T;DP=105     GT:GQ:DP        1|1:92:29       1|1:83:26       1|1:100:38
+20     19431913        rs2294899       G       A       .       PASS    AA=A;DP=138     GT:GQ:DP        1|1:92:29       1|1:83:26       1|1:100:84
+8      10209522        rs6601432       C       G       .       PASS    AA=G;DP=122     GT:GQ:DP        1|1:92:29       1|1:83:27       1|1:100:69
+16     61696282        rs198021        T       C       .       PASS    AA=C;DP=121     GT:GQ:DP        1|1:92:29       1|1:83:31       1|1:100:49
+8      82532263        rs7814865       C       G       .       PASS    AA=G;DP=145     GT:GQ:DP        1|1:92:29       1|1:86:27       1|1:100:43
+1      232171226       rs4920271       T       C       .       PASS    AA=N;DP=120     GT:GQ:DP        1|1:92:29       1|1:86:27       1|1:100:65
+3      1590450 rs426218        T       C       .       PASS    AA=C;DP=122     GT:GQ:DP        1|1:92:29       1|1:86:28       1|1:100:68
+1      164134793       rs3790659       T       C       .       PASS    AA=C;DP=141;HM2;HM3     GT:GQ:DP        1|1:92:29       1|1:86:28       1|1:100:83
+1      42132857        rs1325502       G       A       .       PASS    AA=A;DP=144;HM2;HM3     GT:GQ:DP        1|1:92:29       1|1:86:28       1|1:100:86
+16     78668432        rs6564730       A       G       .       PASS    AA=a;DP=128     GT:GQ:DP        1|1:92:29       1|1:91:35       1|1:100:63
+4      126472603       rs2663257       G       T       .       PASS    AA=T;DP=109     GT:GQ:DP        1|1:92:29       1|1:92:29       1|1:100:27
+2      16561716        rs6705856       C       T       .       PASS    AA=T;DP=132     GT:GQ:DP        1|1:92:29       1|1:92:29       1|1:100:74
+6      71709066        rs56220565      G       T       .       PASS    AA=T;DP=142     GT:GQ:DP        1|1:92:29       1|1:92:29       1|1:100:80
+21     24164294        rs2256568       T       C       .       PASS    AA=C;DP=125     GT:GQ:DP        1|1:92:29       1|1:95:30       1|1:100:64
+11     58684609        rs680661        C       T       .       PASS    AA=T;DP=149     GT:GQ:DP        1|1:92:29       1|1:95:30       1|1:100:92
+7      24758523        rs2248146       C       T       .       PASS    AA=T;DP=146     GT:GQ:DP        1|1:92:29       1|1:95:31       1|1:100:88
+12     2052747 rs2283272       C       T       .       PASS    AA=T;DP=148     GT:GQ:DP        1|1:92:29       1|1:95:31       1|1:100:91
+14     85212433        rs1543470       A       C       .       PASS    AA=C;DP=133     GT:GQ:DP        1|1:92:29       1|1:97:37       1|1:100:67
+8      140949220       rs4367514       C       G       .       PASS    AA=G;DP=145     GT:GQ:DP        1|1:92:30       1|1:100:35      1|1:100:35
+16     10444289        rs7189680       A       G       .       PASS    AA=G;DP=122     GT:GQ:DP        1|1:92:30       1|1:100:35      1|1:100:58
+1      212371114       rs723098        G       A       .       PASS    AA=A;DP=128;HM2;HM3     GT:GQ:DP        1|1:92:30       1|1:100:37      1|1:100:62
+7      4335011 rs3944107       C       T       .       PASS    AA=T;DP=164     GT:GQ:DP        1|1:92:30       1|1:100:39      1|1:100:47
+14     95769282        rs8005240       T       C       .       PASS    AA=C;DP=94      GT:GQ:DP        1|1:92:30       1|1:16:14       1|1:100:44
+11     97063629        rs672088        C       G       .       PASS    AA=C;DP=106     GT:GQ:DP        1|1:92:30       1|1:18:15       1|1:100:59
+5      106649767       rs42304 C       G       .       PASS    AA=G;DP=124     GT:GQ:DP        1|1:92:30       1|1:27:18       1|1:100:77
+5      5039077 rs30468 C       T       .       PASS    AA=C;DP=103     GT:GQ:DP        1|1:92:30       1|1:32:10       1|1:100:63
+22     37327194        rs5750638       A       G       .       PASS    AA=G;DP=92      GT:GQ:DP        1|1:92:30       1|1:35:10       1|1:100:53
+1      217717364       rs2605107       C       A       .       PASS    AA=A;DP=132;HM2;HM3     GT:GQ:DP        1|1:92:30       1|1:39:17       1|1:100:47
+1      114690355       rs559692        T       G       .       PASS    AA=G;DP=82      GT:GQ:DP        1|1:92:30       1|1:41:12       1|1:100:38
+2      115023794       rs11903060      A       G       .       PASS    AA=N;DP=110     GT:GQ:DP        1|1:92:30       1|1:41:12       1|1:100:68
+2      220125047       rs4672933       A       T       .       PASS    AA=T;DP=107     GT:GQ:DP        1|1:92:30       1|1:41:15       1|1:100:62
+5      83218304        rs13157547      A       G       .       PASS    AA=G;DP=119     GT:GQ:DP        1|1:92:30       1|1:41:23       1|1:100:69
+7      128563460       rs10249010      T       C       .       PASS    AA=C;DP=139     GT:GQ:DP        1|1:92:30       1|1:43:20       1|1:100:48
+11     42974279        rs7952577       G       A       .       PASS    AA=C;DP=78      GT:GQ:DP        1|1:92:30       1|1:47:14       1|1:100:34
+14     59759793        rs7149772       A       G       .       PASS    AA=T;DP=106     GT:GQ:DP        1|1:92:30       1|1:48:21       1|1:100:55
+12     57760554        rs978615        T       C       .       PASS    AA=C;DP=126     GT:GQ:DP        1|1:92:30       1|1:49:21       1|1:100:73
+10     13037489        rs2668901       A       G       .       PASS    AA=G;DP=111     GT:GQ:DP        1|1:92:30       1|1:49:26       1|1:100:55
+5      2621805 rs424671        C       T       .       PASS    AA=C;DP=97      GT:GQ:DP        1|1:92:30       1|1:50:15       1|1:100:37
+6      142800324       rs1262686       A       G       .       PASS    AA=G;DP=107     GT:GQ:DP        1|1:92:30       1|1:50:15       1|1:100:64
+8      136988822       rs7003002       G       A       .       PASS    AA=A;DP=111     GT:GQ:DP        1|1:92:30       1|1:52:22       1|1:100:46
+9      89962383        rs4326471       G       C       .       PASS    AA=G;DP=97      GT:GQ:DP        1|1:92:30       1|1:53:16       1|1:100:50
+1      178391495       rs3767196       T       C       .       PASS    AA=t;DP=119;HM2;HM3     GT:GQ:DP        1|1:92:30       1|1:53:16       1|1:100:71
+3      179036523       rs9831439       G       A       .       PASS    AA=A;DP=123     GT:GQ:DP        1|1:92:30       1|1:54:23       1|1:100:71
+8      24274393        rs6557740       C       T       .       PASS    AA=T;DP=94      GT:GQ:DP        1|1:92:30       1|1:56:17       1|1:100:38
+5      112795261       rs2431549       C       G       .       PASS    AA=G;DP=95      GT:GQ:DP        1|1:92:30       1|1:56:17       1|1:100:48
+13     38732466        rs4362262       C       T       .       PASS    AA=C;DP=111     GT:GQ:DP        1|1:92:30       1|1:56:18       1|1:100:61
+4      99115721        rs809179        C       G       .       PASS    AA=G;DP=91      GT:GQ:DP        1|1:92:30       1|1:59:18       1|1:100:43
+13     39142586        rs7326555       T       C       .       PASS    AA=C;DP=95      GT:GQ:DP        1|1:92:30       1|1:59:18       1|1:100:48
+4      115358173       rs9884892       G       C       .       PASS    AA=C;DP=120     GT:GQ:DP        1|1:92:30       1|1:59:18       1|1:100:59
+22     41986884        rs139031        G       C       .       PASS    AA=C;DP=113     GT:GQ:DP        1|1:92:30       1|1:59:18       1|1:100:64
+5      141958427       rs250092        A       G       .       PASS    AA=G;DP=118     GT:GQ:DP        1|1:92:30       1|1:59:21       1|1:100:64
+11     54904412        rs4254092       A       C       .       PASS    AA=.;DP=113     GT:GQ:DP        1|1:92:30       1|1:59:25       1|1:100:61
+10     77585588        rs1865642       C       T       .       PASS    AA=T;DP=125     GT:GQ:DP        1|1:92:30       1|1:62:20       1|1:100:74
+14     71421074        rs36427 T       C       .       PASS    AA=T;DP=107     GT:GQ:DP        1|1:92:30       1|1:67:28       1|1:100:48
+6      128432673       rs6938574       T       C       .       PASS    AA=C;DP=102     GT:GQ:DP        1|1:92:30       1|1:68:21       1|1:100:51
+1      226500114       rs1888681       T       C       .       PASS    AA=C;DP=113;HM2;HM3     GT:GQ:DP        1|1:92:30       1|1:68:21       1|1:100:61
+11     127630829       rs471893        T       C       .       PASS    AA=N;DP=117     GT:GQ:DP        1|1:92:30       1|1:68:21       1|1:100:67
+16     12753677        rs11075154      A       G       .       PASS    AA=G;DP=111     GT:GQ:DP        1|1:92:30       1|1:68:22       1|1:100:60
+12     60430592        rs7487386       G       C       .       PASS    AA=C;DP=124     GT:GQ:DP        1|1:92:30       1|1:68:23       1|1:100:71
+3      71055995        rs17802967      T       C       .       PASS    AA=T;DP=128     GT:GQ:DP        1|1:92:30       1|1:71:22       1|1:100:76
+11     4496723 rs1367310       A       G       .       PASS    AA=a;DP=128     GT:GQ:DP        1|1:92:30       1|1:71:22       1|1:100:77
+9      21561513        rs10811572      G       C       .       PASS    AA=C;DP=129     GT:GQ:DP        1|1:92:30       1|1:71:23       1|1:100:74
+11     119556169       rs471776        A       G       .       PASS    AA=-;DP=131     GT:GQ:DP        1|1:92:30       1|1:71:23       1|1:100:78
+11     38810593        rs1913045       A       G       .       PASS    AA=G;DP=107     GT:GQ:DP        1|1:92:30       1|1:71:24       1|1:100:52
+9      89418575        rs2042006       G       C       .       PASS    AA=C;DP=120     GT:GQ:DP        1|1:92:30       1|1:74:23       1|1:100:72
+6      158864221       rs894125        T       G       .       PASS    AA=G;DP=142     GT:GQ:DP        1|1:92:30       1|1:74:23       1|1:100:92
+10     26028533        rs2505502       A       G       .       PASS    AA=G;DP=118     GT:GQ:DP        1|1:92:30       1|1:74:25       1|1:100:53
+2      84398143        rs10209961      T       C       .       PASS    AA=T;DP=141     GT:GQ:DP        1|1:92:30       1|1:77:24       1|1:100:83
+3      141673946       rs567094        A       G       .       PASS    AA=G;DP=134     GT:GQ:DP        1|1:92:30       1|1:77:25       1|1:100:80
+5      31565063        rs6450850       T       C       .       PASS    AA=C;DP=107     GT:GQ:DP        1|1:92:30       1|1:77:27       1|1:100:39
+12     12017547        rs10743970      C       T       .       PASS    AA=T;DP=138     GT:GQ:DP        1|1:92:30       1|1:80:26       1|1:100:82
+8      3414492 rs6558798       A       G       .       PASS    AA=G;DP=119     GT:GQ:DP        1|1:92:30       1|1:82:32       1|1:100:56
+2      15413214        rs10185835      A       G       .       PASS    AA=C;DP=117     GT:GQ:DP        1|1:92:30       1|1:83:26       1|1:100:60
+4      45297785        rs6846586       A       G       .       PASS    AA=G;DP=131     GT:GQ:DP        1|1:92:30       1|1:83:27       1|1:100:68
+5      108596789       rs9968753       C       T       .       PASS    AA=G;DP=127     GT:GQ:DP        1|1:92:30       1|1:83:27       1|1:100:71
+17     6115342 rs4796457       A       G       .       PASS    AA=N;DP=116     GT:GQ:DP        1|1:92:30       1|1:83:28       1|1:100:60
+8      61371521        rs6471863       G       A       .       PASS    AA=A;DP=148     GT:GQ:DP        1|1:92:30       1|1:86:28       1|1:100:42
+10     89436364        rs7077922       T       C       .       PASS    AA=C;DP=136     GT:GQ:DP        1|1:92:30       1|1:86:30       1|1:100:75
+2      239685559       rs4852019       A       G       .       PASS    AA=G;DP=108     GT:GQ:DP        1|1:92:30       1|1:92:29       1|1:100:49
+12     129428648       rs12811122      A       T       .       PASS    AA=N;DP=128     GT:GQ:DP        1|1:92:30       1|1:92:29       1|1:100:69
+1      167590166       rs10800435      C       T       .       PASS    AA=T;DP=114;HM2 GT:GQ:DP        1|1:92:30       1|1:95:30       1|1:100:56
+15     18846879        rs1846764       C       G       .       PASS    AA=G;DP=170     GT:GQ:DP        1|1:92:31       1|1:21:58       1|1:100:65
+7      115272981       rs7783740       G       T       .       PASS    AA=g;DP=128     GT:GQ:DP        1|1:92:31       1|1:27:18       1|1:100:78
+12     90212047        rs1797275       T       C       .       PASS    AA=C;DP=90      GT:GQ:DP        1|1:92:31       1|1:29:9        1|1:100:38
+4      125998510       rs6842124       A       G       .       PASS    AA=A;DP=107     GT:GQ:DP        1|1:92:31       1|1:38:11       1|1:100:64
+1      14564858        rs820671        A       G       .       PASS    AA=A;DP=96;HM2;HM3      GT:GQ:DP        1|1:92:31       1|1:41:19       1|1:100:46
+17     78266682        rs2459711       A       G       .       PASS    AA=G;DP=111     GT:GQ:DP        1|1:92:31       1|1:50:15       1|1:100:65
+2      135520236       rs17293519      A       G       .       PASS    AA=a;DP=124     GT:GQ:DP        1|1:92:31       1|1:50:15       1|1:100:79
+14     104055011       rs56166764      G       A       .       PASS    AA=G;DP=98      GT:GQ:DP        1|1:92:31       1|1:53:16       1|1:100:50
+2      63759552        rs262533        C       G       .       PASS    AA=G;DP=107     GT:GQ:DP        1|1:92:31       1|1:53:16       1|1:100:61
+9      32935939        rs10122533      T       C       .       PASS    AA=C;DP=112     GT:GQ:DP        1|1:92:31       1|1:56:17       1|1:100:61
+16     11808157        rs9972646       T       A       .       PASS    AA=A;DP=105     GT:GQ:DP        1|1:92:31       1|1:59:18       1|1:100:57
+2      50241788        rs2602003       A       G       .       PASS    AA=G;DP=99      GT:GQ:DP        1|1:92:31       1|1:62:19       1|1:100:47
+5      90024914        rs10043836      T       C       .       PASS    AA=C;DP=106     GT:GQ:DP        1|1:92:31       1|1:62:19       1|1:100:58
+9      114123073       rs10739344      C       T       .       PASS    AA=T;DP=123     GT:GQ:DP        1|1:92:31       1|1:68:22       1|1:100:52
+5      76765294        rs335628        C       G       .       PASS    AA=G;DP=116     GT:GQ:DP        1|1:92:31       1|1:69:33       1|1:100:55
+9      84840736        rs1125915       C       T       .       PASS    AA=T;DP=101     GT:GQ:DP        1|1:92:31       1|1:71:22       1|1:100:49
+6      29592360        rs3094566       G       A       .       PASS    AA=g;DP=138     GT:GQ:DP        1|1:92:31       1|1:74:23       1|1:100:81
+7      83329257        rs1474450       C       T       .       PASS    AA=t;DP=119     GT:GQ:DP        1|1:92:31       1|1:77:25       1|1:100:64
+4      88584854        rs7668956       G       A       .       PASS    AA=A;DP=124     GT:GQ:DP        1|1:92:31       1|1:83:26       1|1:100:68
+9      72498614        rs10868878      C       T       .       PASS    AA=T;DP=160     GT:GQ:DP        1|1:92:31       1|1:92:29       1|1:100:93
+17     74130406        rs7503451       A       G       .       PASS    AA=A;DP=90      GT:GQ:DP        1|1:92:32       0|0:5:7 1|0:100:38
+5      162684363       rs300212        T       C       .       PASS    AA=C;DP=154     GT:GQ:DP        1|1:92:32       1|1:66:26       1|1:100:43
+15     74596361        rs157786        T       C       .       PASS    AA=C;DP=137     GT:GQ:DP        1|1:92:32       1|1:83:26       1|1:100:81
+3      120055802       rs808904        G       C       .       PASS    AA=t;DP=128     GT:GQ:DP        1|1:92:32       1|1:89:29       1|1:100:65
+13     31170420        rs4941924       T       C       .       PASS    AA=T;DP=127     GT:GQ:DP        1|1:92:32       1|1:92:32       1|1:100:64
+15     68576096        rs12441686      G       A       .       PASS    AA=A;DP=122     GT:GQ:DP        1|1:92:33       1|1:62:22       1|1:100:55
+5      108236496       rs11240988      A       C       .       PASS    AA=-;DP=106     GT:GQ:DP        1|1:92:34       1|1:44:14       1|1:100:56
+16     83135742        rs371915        A       G       .       PASS    AA=G;DP=101     GT:GQ:DP        1|1:92:34       1|1:59:18       1|1:100:40
+5      63900435        rs10072310      A       C       .       PASS    AA=A;DP=86      GT:GQ:DP        1|1:92:35       1|1:21:11       1|1:100:41
+11     115048316       rs1502075       C       G       .       PASS    AA=c;DP=108     GT:GQ:DP        1|1:92:35       1|1:50:16       1|1:100:57
+10     15826859        rs2500316       G       A       .       PASS    AA=g;DP=145     GT:GQ:DP        1|1:92:35       1|1:98:33       1|1:100:78
+6      4421892 rs1265263       A       C       .       PASS    AA=C;DP=125     GT:GQ:DP        1|1:92:36       1|1:65:21       1|1:100:70
+8      76732624        rs2941447       T       C       .       PASS    AA=C;DP=128     GT:GQ:DP        1|1:92:36       1|1:68:22       1|1:100:74
+4      1376651 rs57570528      C       T       .       PASS    AA=c;DP=149     GT:GQ:DP        1|1:92:38       0|1:18:24       1|0:100:42
+20     45099261        rs4810592       T       A       .       PASS    AA=A;DP=122     GT:GQ:DP        1|1:92:38       1|0:100:18      1|1:100:48
+17     23745918        rs1128162       C       A       .       PASS    AA=A;DP=143     GT:GQ:DP        1|1:92:39       0|0:84:28       1|0:100:75
+1      207551390       rs2174775       T       C       .       PASS    AA=C;DP=123     GT:GQ:DP        1|1:92:39       1|0:14:24       1|1:100:59
+14     85894371        rs804938        C       T       .       PASS    AA=T;DP=104     GT:GQ:DP        1|1:93:31       1|0:100:18      1|1:100:56
+17     64575555        rs2159434       C       T       .       PASS    AA=T;DP=139     GT:GQ:DP        1|1:93:31       1|0:100:19      1|1:100:51
+6      90832785        rs7762633       T       C       .       PASS    AA=C;DP=113     GT:GQ:DP        1|1:93:31       1|0:100:20      1|1:100:49
+5      73846116        rs298367        C       A       .       PASS    AA=-;DP=116     GT:GQ:DP        1|1:93:31       1|0:100:23      1|1:100:55
+4      126913819       rs10013424      A       G       .       PASS    AA=A;DP=114     GT:GQ:DP        1|1:93:31       1|0:100:23      1|1:100:59
+4      168842098       rs11735603      C       A       .       PASS    AA=C;DP=110     GT:GQ:DP        1|1:93:31       1|0:100:24      1|1:100:56
+8      139781174       rs4454319       A       G       .       PASS    AA=a;DP=132     GT:GQ:DP        1|1:93:31       1|0:100:25      1|1:100:77
+22     33661805        rs5755423       T       C       .       PASS    AA=T;DP=120     GT:GQ:DP        1|1:93:31       1|0:100:26      1|1:100:63
+10     125652969       rs7094799       C       T       .       PASS    AA=C;DP=134     GT:GQ:DP        1|1:93:31       1|0:100:28      1|1:100:75
+10     13807973        rs1541012       G       A       .       PASS    AA=A;DP=112     GT:GQ:DP        1|1:93:31       1|0:100:29      1|1:100:52
+5      36668160        rs4869680       G       A       .       PASS    AA=A;DP=152     GT:GQ:DP        1|1:93:31       1|0:100:30      1|1:100:45
+1      216220199       rs1490337       G       T       .       PASS    AA=T;DP=111;HM2 GT:GQ:DP        1|1:93:31       1|0:100:31      1|1:100:48
+12     117993141       rs1405049       C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        1|1:93:31       1|0:22:17       1|1:100:70
+9      31142444        rs1335160       C       T       .       PASS    AA=T;DP=88      GT:GQ:DP        1|1:93:31       1|0:35:6        1|1:100:52
+7      39514686        rs6964238       G       T       .       PASS    AA=T;DP=159     GT:GQ:DP        1|1:93:31       1|0:54:29       1|1:100:56
+5      169160260       rs261592        A       G       .       PASS    AA=G;DP=114     GT:GQ:DP        1|1:93:31       1|0:64:26       1|1:100:58
+14     37840850        rs1754703       A       G       .       PASS    AA=G;DP=118     GT:GQ:DP        1|1:93:31       1|0:74:21       1|1:100:66
+5      37878433        rs2973123       A       C       .       PASS    AA=C;DP=127     GT:GQ:DP        1|1:93:31       1|0:77:17       1|1:100:82
+10     31148221        rs12244105      G       T       .       PASS    AA=G;DP=110     GT:GQ:DP        1|1:93:31       1|0:89:23       1|1:100:57
+7      79184818        rs1523837       C       G       .       PASS    AA=-;DP=101     GT:GQ:DP        1|1:93:31       1|0:91:22       1|1:100:48
+14     78976318        rs6574507       T       C       .       PASS    AA=C;DP=128     GT:GQ:DP        1|1:93:31       1|0:96:27       1|1:100:71
+13     39938898        rs9532549       A       C       .       PASS    AA=C;DP=142     GT:GQ:DP        1|1:93:31       1|1:62:21       1|1:100:90
+9      6386215 rs10217560      G       T       .       PASS    AA=G;DP=92      GT:GQ:DP        1|1:93:32       0|1:100:12      1|0:100:49
+15     70375642        .       T       A       .       PASS    AA=T;DP=100     GT:GQ:DP        1|1:93:32       0|1:100:18      1|0:100:51
+15     21808827        rs8038240       G       A       .       PASS    AA=.;DP=127     GT:GQ:DP        1|1:93:32       0|1:100:18      1|0:100:77
+17     28624913        rs4795760       A       G       .       PASS    AA=G;DP=111     GT:GQ:DP        1|1:93:32       0|1:100:19      1|0:100:49
+3      8121388 rs486211        T       G       .       PASS    AA=G;DP=107     GT:GQ:DP        1|1:93:32       0|1:100:20      1|0:100:55
+9      11025580        rs10120902      A       G       .       PASS    AA=a;DP=112     GT:GQ:DP        1|1:93:32       0|1:100:22      1|0:100:57
+9      856217  rs7851390       A       G       .       PASS    AA=A;DP=115     GT:GQ:DP        1|1:93:32       0|1:100:22      1|0:100:62
+4      41437718        rs7689304       G       C       .       PASS    AA=C;DP=129     GT:GQ:DP        1|1:93:32       0|1:100:22      1|0:100:73
+6      28483189        rs6928773       T       C       .       PASS    AA=C;DP=131     GT:GQ:DP        1|1:93:32       0|1:100:22      1|0:100:78
+11     65796629        rs555826        A       G       .       PASS    AA=G;DP=152     GT:GQ:DP        1|1:93:32       0|1:100:23      1|0:100:43
+2      186763539       .       T       C       .       PASS    AA=T;DP=109     GT:GQ:DP        1|1:93:32       0|1:100:25      1|0:100:41
+1      14237758        rs10733140      C       A       .       PASS    AA=C;DP=119;HM2 GT:GQ:DP        1|1:93:32       0|1:100:25      1|0:100:63
+8      119420220       rs2514945       A       C       .       PASS    AA=C;DP=133     GT:GQ:DP        1|1:93:32       0|1:100:25      1|0:100:69
+9      92232403        rs10821445      G       A       .       PASS    AA=A;DP=109     GT:GQ:DP        1|1:93:32       0|1:100:26      1|0:100:40
+12     6280031 rs7315020       T       C       .       PASS    AA=T;DP=128     GT:GQ:DP        1|1:93:32       0|1:100:26      1|0:100:72
+9      9543350 rs736042        C       T       .       PASS    AA=T;DP=124     GT:GQ:DP        1|1:93:32       0|1:100:27      1|0:100:67
+1      90432975        rs12036478      A       G       .       PASS    AA=A;DP=147     GT:GQ:DP        1|1:93:32       0|1:100:30      1|0:100:39
+1      207715739       rs4844476       G       C       .       PASS    AA=C;DP=131;HM2;HM3     GT:GQ:DP        1|1:93:32       0|1:100:30      1|0:100:70
+3      42245270        rs6605332       T       G       .       PASS    AA=G;DP=135     GT:GQ:DP        1|1:93:32       0|1:100:32      1|0:100:71
+7      100888734       rs11770719      C       T       .       PASS    AA=C;DP=132     GT:GQ:DP        1|1:93:32       0|1:100:33      1|0:100:70
+11     35954784        rs10836477      T       G       .       PASS    AA=G;DP=136     GT:GQ:DP        1|1:93:32       0|1:100:34      1|0:100:71
+13     104710080       rs3015366       G       A       .       PASS    AA=A;DP=141     GT:GQ:DP        1|1:93:32       0|1:100:34      1|0:100:74
+11     96181774        rs4753918       G       T       .       PASS    AA=G;DP=136     GT:GQ:DP        1|1:93:32       0|1:100:36      1|0:100:69
+8      1845108 rs4876274       T       C       .       PASS    AA=t;DP=113     GT:GQ:DP        1|1:93:32       0|1:14:14       1|0:100:66
+10     72620870        rs7919850       T       C       .       PASS    AA=C;DP=121     GT:GQ:DP        1|1:93:32       0|1:30:15       1|0:100:75
+8      101717340       rs2187016       C       G       .       PASS    AA=C;DP=139     GT:GQ:DP        1|1:93:32       0|1:38:18       1|0:100:89
+7      88522380        rs12533851      G       A       .       PASS    AA=G;DP=107     GT:GQ:DP        1|1:93:32       0|1:38:21       1|0:100:51
+5      38789669        rs4869604       C       T       .       PASS    AA=T;DP=142     GT:GQ:DP        1|1:93:32       0|1:47:26       1|0:100:84
+9      97398542        rs10115099      C       T       .       PASS    AA=T;DP=151     GT:GQ:DP        1|1:93:32       0|1:48:27       1|0:100:90
+1      207415447       rs6685110       A       G       .       PASS    AA=A;DP=118     GT:GQ:DP        1|1:93:32       0|1:55:23       1|0:100:63
+9      121172005       rs1324627       T       G       .       PASS    AA=G;DP=124     GT:GQ:DP        1|1:93:32       0|1:59:17       1|0:100:78
+16     388562  rs11248932      A       T       .       PASS    AA=t;DP=122     GT:GQ:DP        1|1:93:32       0|1:60:24       1|0:100:64
+15     29347933        rs1869898       G       A       .       PASS    AA=g;DP=136     GT:GQ:DP        1|1:93:32       0|1:71:25       1|0:100:82
+5      141577727       rs10070615      A       G       .       PASS    AA=A;DP=107     GT:GQ:DP        1|1:93:32       0|1:80:20       1|0:100:58
+20     55343949        rs3764674       T       G       .       PASS    AA=T;DP=127     GT:GQ:DP        1|1:93:32       0|1:81:20       1|0:100:35
+10     10234095        rs7074256       T       C       .       PASS    AA=T;DP=118     GT:GQ:DP        1|1:93:32       0|1:83:22       1|0:100:64
+17     31375147        rs6505503       C       T       .       PASS    AA=C;DP=142     GT:GQ:DP        1|1:93:32       0|1:88:16       1|0:100:88
+9      139805428       rs4876942       T       C       .       PASS    AA=t;DP=111     GT:GQ:DP        1|1:93:32       0|1:90:18       1|0:100:59
+14     35589603        rs2780309       T       C       .       PASS    AA=C;DP=130     GT:GQ:DP        1|1:93:32       0|1:90:39       1|0:100:61
+13     28483935        rs7994188       G       A       .       PASS    AA=G;DP=137     GT:GQ:DP        1|1:93:32       1|0:100:17      1|1:100:83
+5      40940749        rs11744119      G       A       .       PASS    AA=G;DP=106     GT:GQ:DP        1|1:93:32       1|0:100:21      1|1:100:53
+3      50133195        rs2856238       T       C       .       PASS    AA=C;DP=138     GT:GQ:DP        1|1:93:32       1|0:100:22      1|1:100:69
+6      35648846        rs10807151      C       T       .       PASS    AA=T;DP=123     GT:GQ:DP        1|1:93:32       1|0:100:22      1|1:100:69
+1      17937231        rs733842        A       G       .       PASS    AA=a;DP=138;HM2 GT:GQ:DP        1|1:93:32       1|0:100:25      1|1:100:82
+17     358119  rs9895280       A       G       .       PASS    AA=G;DP=140     GT:GQ:DP        1|1:93:32       1|0:100:25      1|1:100:82
+4      5288194 rs7656213       C       T       .       PASS    AA=T;DP=120     GT:GQ:DP        1|1:93:32       1|0:100:27      1|1:100:61
+12     3971262 rs2724216       T       C       .       PASS    AA=T;DP=170     GT:GQ:DP        1|1:93:32       1|0:100:27      1|1:100:72
+5      21196328        rs371821        C       T       .       PASS    AA=C;DP=128     GT:GQ:DP        1|1:93:32       1|0:100:28      1|1:100:67
+8      124825874       rs7817296       A       G       .       PASS    AA=A;DP=120     GT:GQ:DP        1|1:93:32       1|0:100:28      1|1:97:60
+10     113330956       rs11595493      C       T       .       PASS    AA=C;DP=139     GT:GQ:DP        1|1:93:32       1|0:100:30      1|1:100:79
+21     36921669        rs928844        C       T       .       PASS    AA=T;DP=142     GT:GQ:DP        1|1:93:32       1|0:100:33      1|1:100:78
+1      241073707       rs12143316      C       T       .       PASS    AA=T;DP=133;HM2;HM3     GT:GQ:DP        1|1:93:32       1|0:100:37      1|1:100:64
+16     8139044 rs1376656       C       A       .       PASS    AA=A;DP=119     GT:GQ:DP        1|1:93:32       1|0:36:18       1|1:100:73
+18     71654538        .       G       A       .       PASS    AA=G;DP=113     GT:GQ:DP        1|1:93:32       1|0:56:20       1|1:100:51
+9      137961494       rs4842053       C       A       .       PASS    AA=C;DP=106     GT:GQ:DP        1|1:93:32       1|0:67:10       1|1:88:49
+8      16924968        rs850407        A       G       .       PASS    AA=G;DP=119     GT:GQ:DP        1|1:93:32       1|0:84:19       1|1:100:69
+11     109370854       rs9633915       G       A       .       PASS    AA=A;DP=144     GT:GQ:DP        1|1:93:33       0|1:100:17      1|0:100:96
+3      188481841       rs698082        C       T       .       PASS    AA=T;DP=131     GT:GQ:DP        1|1:93:33       0|1:100:20      1|0:100:77
+1      58809500        rs602579        G       A       .       PASS    AA=A;DP=143;HM2;HM3     GT:GQ:DP        1|1:93:33       0|1:100:21      1|0:100:91
+1      24085586        rs7537808       C       T       .       PASS    AA=C;DP=105     GT:GQ:DP        1|1:93:33       0|1:100:22      1|0:100:37
+6      106379120       rs2063199       A       G       .       PASS    AA=G;DP=128     GT:GQ:DP        1|1:93:33       0|1:100:24      1|0:100:74
+8      141129209       rs4454254       G       A       .       PASS    AA=A;DP=143     GT:GQ:DP        1|1:93:33       0|1:100:24      1|0:100:90
+3      1532494 rs11128727      C       T       .       PASS    AA=C;DP=142     GT:GQ:DP        1|1:93:33       0|1:100:25      1|0:100:84
+3      70873863        rs7635109       T       C       .       PASS    AA=C;DP=98      GT:GQ:DP        1|1:93:33       0|1:100:27      1|0:100:39
+11     95963188        rs9704076       T       C       .       PASS    AA=N;DP=138     GT:GQ:DP        1|1:93:33       0|1:100:33      1|0:100:72
+7      36542267        rs10265886      T       A       .       PASS    AA=A;DP=109     GT:GQ:DP        1|1:93:33       0|1:67:16       1|0:100:59
+13     36184714        rs7997268       T       C       .       PASS    AA=T;DP=115     GT:GQ:DP        1|1:93:33       0|1:74:14       1|0:100:68
+6      32620579        .       T       C       .       PASS    AA=-;DP=102     GT:GQ:DP        1|1:93:33       0|1:93:24       1|0:100:45
+9      4553316 rs6476878       A       G       .       PASS    AA=G;DP=129     GT:GQ:DP        1|1:93:33       0|1:97:22       1|0:100:77
+20     1338247 rs6514392       A       G       .       PASS    AA=G;DP=137     GT:GQ:DP        1|1:93:33       1|0:100:21      1|1:100:85
+3      163165602       .       T       C       .       PASS    AA=T;DP=118     GT:GQ:DP        1|1:93:33       1|0:100:22      1|1:100:64
+21     36776234        rs2845768       C       T       .       PASS    AA=C;DP=131     GT:GQ:DP        1|1:93:33       1|0:100:22      1|1:100:79
+3      2885489 rs7650299       G       A       .       PASS    AA=A;DP=124     GT:GQ:DP        1|1:93:33       1|0:100:26      1|1:100:64
+9      89376140        rs62576173      C       T       .       PASS    AA=C;DP=99      GT:GQ:DP        1|1:93:34       0|0:48:16       1|0:100:37
+10     86016131        rs11818532      T       C       .       PASS    AA=T;DP=141     GT:GQ:DP        1|1:93:34       0|1:100:20      1|0:100:90
+11     111596721       rs2518346       T       C       .       PASS    AA=T;DP=117     GT:GQ:DP        1|1:93:34       0|1:100:22      1|0:100:59
+3      139827389       rs361076        G       C       .       PASS    AA=C;DP=146     GT:GQ:DP        1|1:93:34       0|1:100:25      1|0:100:44
+10     60417140        rs1198071       T       C       .       PASS    AA=C;DP=165     GT:GQ:DP        1|1:93:34       0|1:100:32      1|0:100:45
+14     82594454        rs1888363       G       A       .       PASS    AA=A;DP=140     GT:GQ:DP        1|1:93:34       0|1:47:20       1|0:100:86
+5      171199043       rs702091        A       G       .       PASS    AA=A;DP=125     GT:GQ:DP        1|1:93:34       0|1:75:24       1|0:100:68
+15     56503549        rs515081        A       G       .       PASS    AA=G;DP=137     GT:GQ:DP        1|1:93:34       0|1:96:23       1|0:100:80
+6      169012882       rs7756719       C       T       .       PASS    AA=C;DP=133     GT:GQ:DP        1|1:93:35       0|1:100:18      1|0:100:78
+12     118358337       rs1716468       C       T       .       PASS    AA=T;DP=153     GT:GQ:DP        1|1:93:35       0|1:100:40      1|0:100:81
+9      133226969       rs10901052      G       A       .       PASS    AA=G;DP=115     GT:GQ:DP        1|1:93:36       1|1:50:15       1|1:100:61
+4      185269979       rs4241784       T       G       .       PASS    AA=T;DP=110     GT:GQ:DP        1|1:93:36       1|1:50:16       1|1:100:46
+17     43635831        rs6504101       A       G       .       PASS    AA=G;DP=124     GT:GQ:DP        1|1:93:36       1|1:77:25       1|1:100:58
+9      33119142        rs1571436       T       C       .       PASS    AA=t;DP=111     GT:GQ:DP        1|1:93:37       1|1:68:21       1|1:100:55
+11     128139366       rs7124123       C       G       .       PASS    AA=G;DP=142     GT:GQ:DP        1|1:93:39       0|0:48:16       1|0:100:87
+1      48027369        rs6588505       C       T       .       PASS    AA=T;DP=173;HM2;HM3     GT:GQ:DP        1|1:93:39       1|0:100:27      1|1:100:69
+6      33356152        rs213215        G       A       .       PASS    AA=A;DP=124     GT:GQ:DP        1|1:93:40       0|1:78:12       1|0:100:72
+12     24594735        rs7132960       C       A       .       PASS    AA=C;DP=160     GT:GQ:DP        1|1:93:40       1|0:65:33       1|1:100:86
+10     71747114        rs10999265      C       T       .       PASS    AA=T;DP=149     GT:GQ:DP        1|1:93:42       0|0:81:29       1|0:100:76
+20     35470888        rs6018348       G       A       .       PASS    AA=g;DP=147     GT:GQ:DP        1|1:93:42       0|1:100:16      1|0:100:42
+1      53766450        .       C       T       .       PASS    AA=C;DP=153     GT:GQ:DP        1|1:93:43       0|0:72:25       1|0:100:86
+7      86924154        rs17149644      T       C       .       PASS    AA=t;DP=148     GT:GQ:DP        1|1:93:44       0|1:79:28       1|0:100:75
+20     5412000 rs1977170       C       A       .       PASS    AA=A;DP=100     GT:GQ:DP        1|1:94:31       1|1:13:12       1|1:100:46
+8      141373543       rs4736170       A       G       .       PASS    AA=N;DP=90      GT:GQ:DP        1|1:94:31       1|1:14:15       1|1:100:37
+15     96423680        rs7178508       C       G       .       PASS    AA=G;DP=136     GT:GQ:DP        1|1:94:33       0|0:100:39      1|0:100:65
+3      41532386        rs9841327       G       A       .       PASS    AA=G;DP=127     GT:GQ:DP        1|1:94:33       0|0:23:16       1|0:100:78
+9      103407823       rs17189632      T       A       .       PASS    AA=T;DP=123     GT:GQ:DP        1|1:94:33       0|0:27:20       1|0:100:71
+16     64712582        rs8060523       T       C       .       PASS    AA=T;DP=115     GT:GQ:DP        1|1:94:33       0|0:36:19       1|0:100:65
+10     119313434       rs4752081       C       G       .       PASS    AA=C;DP=138     GT:GQ:DP        1|1:94:33       0|0:39:13       1|0:100:95
+2      74787731        rs1005397       A       C       .       PASS    AA=A;DP=111     GT:GQ:DP        1|1:94:33       0|0:42:14       1|0:100:58
+3      185395033       rs843336        A       G       .       PASS    AA=A;DP=139     GT:GQ:DP        1|1:94:33       0|0:42:22       1|0:100:43
+15     96318937        rs6496272       C       T       .       PASS    AA=T;DP=133     GT:GQ:DP        1|1:94:33       0|0:45:21       1|0:100:75
+13     36344108        rs622085        C       T       .       PASS    AA=T;DP=138     GT:GQ:DP        1|1:94:33       0|0:45:25       1|0:100:80
+7      137993903       rs34819000      C       A       .       PASS    AA=A;DP=118     GT:GQ:DP        1|1:94:33       0|0:51:17       1|0:100:69
+10     1891013 rs11250837      C       T       .       PASS    AA=C;DP=124     GT:GQ:DP        1|1:94:33       0|0:51:18       1|0:100:73
+8      54978354        rs2128817       T       C       .       PASS    AA=C;DP=124     GT:GQ:DP        1|1:94:33       0|0:57:19       1|0:100:72
+13     50665814        .       A       C       .       PASS    AA=A;DP=150     GT:GQ:DP        1|1:94:33       0|0:61:28       1|0:100:42
+3      157435509       rs9877749       T       C       .       PASS    AA=T;DP=109     GT:GQ:DP        1|1:94:33       0|0:63:21       1|0:100:55
+10     69037083        rs55755897      A       G       .       PASS    AA=A;DP=122     GT:GQ:DP        1|1:94:33       0|0:63:21       1|0:100:70
+15     83388531        rs56833943      C       A       .       PASS    AA=A;DP=113     GT:GQ:DP        1|1:94:33       0|0:66:22       1|0:100:55
+7      136182323       rs12333547      A       G       .       PASS    AA=A;DP=112     GT:GQ:DP        1|1:94:33       0|0:66:22       1|0:100:57
+11     105903796       rs10791811      A       G       .       PASS    AA=G;DP=114     GT:GQ:DP        1|1:94:33       0|0:66:23       1|0:100:60
+2      53712470        rs10202442      T       C       .       PASS    AA=T;DP=127     GT:GQ:DP        1|1:94:33       0|0:66:24       1|0:100:72
+3      54742727        .       C       T       .       PASS    AA=C;DP=118     GT:GQ:DP        1|1:94:33       0|0:69:23       1|0:100:60
+6      108446188       rs7454239       G       A       .       PASS    AA=G;DP=122     GT:GQ:DP        1|1:94:33       0|0:69:23       1|0:100:65
+16     24034534        rs9745499       A       G       .       PASS    AA=A;DP=141     GT:GQ:DP        1|1:94:33       0|0:69:23       1|0:100:85
+3      697831  rs2627964       A       G       .       PASS    AA=A;DP=123     GT:GQ:DP        1|1:94:33       0|0:69:24       1|0:100:67
+2      190794786       .       A       T       .       PASS    AA=T;DP=127     GT:GQ:DP        1|1:94:33       0|0:75:25       1|0:100:70
+3      43063741        rs489117        T       C       .       PASS    AA=C;DP=131     GT:GQ:DP        1|1:94:33       0|0:78:27       1|0:100:71
+9      19344259        rs10121879      C       T       .       PASS    AA=C;DP=134     GT:GQ:DP        1|1:94:33       0|0:81:27       1|0:100:74
+8      99437222        rs28716952      T       A       .       PASS    AA=T;DP=155     GT:GQ:DP        1|1:94:33       0|0:84:28       1|0:100:94
+8      96174937        rs4323439       G       A       .       PASS    AA=G;DP=116     GT:GQ:DP        1|1:94:33       0|0:84:29       1|0:100:53
+6      21546868        rs6456426       C       A       .       PASS    AA=C;DP=128     GT:GQ:DP        1|1:94:33       0|0:87:29       1|0:100:68
+5      32877691        rs1818116       A       G       .       PASS    AA=A;DP=145     GT:GQ:DP        1|1:94:33       0|0:99:34       1|0:100:78
+14     82827336        rs229799        A       G       .       PASS    AA=A;DP=125     GT:GQ:DP        1|1:94:33       0|1:98:22       1|0:100:68
+6      120723979       rs62424383      A       T       .       PASS    AA=T;DP=113     GT:GQ:DP        1|1:94:34       0|0:48:17       1|0:100:64
+9      81769389        rs7853567       A       G       .       PASS    AA=A;DP=122     GT:GQ:DP        1|1:94:34       0|0:66:22       1|0:100:67
+11     6432515 rs16913732      A       T       .       PASS    AA=A;DP=135     GT:GQ:DP        1|1:94:34       0|0:66:23       1|0:100:78
+20     49470941        rs6021195       A       G       .       PASS    AA=G;DP=128     GT:GQ:DP        1|1:94:34       0|0:72:24       1|0:100:64
+12     104489159       rs2694405       A       G       .       PASS    AA=a;DP=119     GT:GQ:DP        1|1:94:34       0|0:81:27       1|0:100:58
+4      90658786        rs11731934      G       T       .       PASS    AA=T;DP=150     GT:GQ:DP        1|1:94:34       0|0:84:29       1|0:100:84
+11     73848764        rs17524 T       C       .       PASS    AA=C;DP=156     GT:GQ:DP        1|1:94:34       0|0:99:33       1|0:100:88
+6      30029752        rs9260555       T       C       .       PASS    AA=.;DP=142     GT:GQ:DP        1|1:94:35       0|0:44:25       1|0:100:42
+9      72964925        rs11142707      T       C       .       PASS    AA=T;DP=126     GT:GQ:DP        1|1:94:35       0|0:75:27       1|0:100:64
+4      160028948       rs4274803       A       G       .       PASS    AA=a;DP=115     GT:GQ:DP        1|1:94:35       1|1:56:17       1|1:100:64
+4      16843921        rs616004        A       G       .       PASS    AA=a;DP=118     GT:GQ:DP        1|1:94:35       1|1:68:23       1|1:100:62
+12     24876257        rs10466757      A       T       .       PASS    AA=A;DP=121     GT:GQ:DP        1|1:94:36       1|1:88:34       1|1:100:52
+1      208890257       rs6540617       T       G       .       PASS    AA=t;DP=118;HM2 GT:GQ:DP        1|1:94:37       1|1:71:23       1|1:100:58
+14     81309990        rs7152688       T       A       .       PASS    AA=A;DP=146     GT:GQ:DP        1|1:94:38       1|0:100:28      1|1:100:63
+7      136399021       rs324565        A       G       .       PASS    AA=G;DP=116     GT:GQ:DP        1|1:94:38       1|1:48:24       1|1:100:57
+9      73691245        rs2310052       A       G       .       PASS    AA=A;DP=124     GT:GQ:DP        1|1:94:40       0|0:51:18       1|0:100:55
+4      39965423        rs28492754      A       G       .       PASS    AA=a;DP=158     GT:GQ:DP        1|1:94:40       0|1:74:28       1|0:100:89
+14     40065873        rs1959248       C       T       .       PASS    AA=T;DP=128     GT:GQ:DP        1|1:95:30       1|1:100:32      1|1:100:67
+12     51450804        rs6580903       C       A       .       PASS    AA=A;DP=152     GT:GQ:DP        1|1:95:30       1|1:100:32      1|1:100:84
+9      108586056       rs10759200      T       C       .       PASS    AA=C;DP=133     GT:GQ:DP        1|1:95:30       1|1:100:33      1|1:100:69
+8      69314054        rs10808759      T       C       .       PASS    AA=t;DP=147     GT:GQ:DP        1|1:95:30       1|1:100:33      1|1:100:71
+3      69544986        rs7616625       G       T       .       PASS    AA=T;DP=136     GT:GQ:DP        1|1:95:30       1|1:100:33      1|1:100:76
+13     98076002        rs9556989       G       C       .       PASS    AA=N;DP=126     GT:GQ:DP        1|1:95:30       1|1:100:34      1|1:100:63
+8      114462230       rs6469454       G       A       .       PASS    AA=A;DP=139     GT:GQ:DP        1|1:95:30       1|1:100:34      1|1:100:78
+14     45129390        rs2415901       A       G       .       PASS    AA=G;DP=153     GT:GQ:DP        1|1:95:30       1|1:100:34      1|1:100:91
+1      232841216       rs590360        C       T       .       PASS    AA=T;DP=156;HM2 GT:GQ:DP        1|1:95:30       1|1:100:36      1|1:100:90
+4      90704982        rs2172890       C       T       .       PASS    AA=T;DP=122     GT:GQ:DP        1|1:95:30       1|1:100:38      1|1:100:54
+10     71242805        rs2683549       C       A       .       PASS    AA=N;DP=109     GT:GQ:DP        1|1:95:30       1|1:16:14       1|1:100:66
+9      7182313 rs2820917       A       G       .       PASS    AA=G;DP=122     GT:GQ:DP        1|1:95:30       1|1:21:14       1|1:100:37
+18     17732152        rs8093099       A       C       .       PASS    AA=C;DP=70      GT:GQ:DP        1|1:95:30       1|1:22:10       1|1:76:25
+4      31377553        rs7669901       C       T       .       PASS    AA=T;DP=97      GT:GQ:DP        1|1:95:30       1|1:25:17       1|1:100:51
+6      141107139       rs7761688       A       C       .       PASS    AA=C;DP=113     GT:GQ:DP        1|1:95:30       1|1:31:14       1|1:100:69
+13     22189717        rs409207        C       G       .       PASS    AA=G;DP=94      GT:GQ:DP        1|1:95:30       1|1:32:16       1|1:100:35
+7      126120352       rs4302786       A       T       .       PASS    AA=T;DP=107     GT:GQ:DP        1|1:95:30       1|1:32:20       1|1:100:56
+18     1029426 rs699518        A       G       .       PASS    AA=G;DP=102     GT:GQ:DP        1|1:95:30       1|1:35:10       1|1:100:56
+4      126046345       rs993854        G       C       .       PASS    AA=C;DP=102     GT:GQ:DP        1|1:95:30       1|1:35:11       1|1:100:60
+10     82132027        rs7090351       T       G       .       PASS    AA=N;DP=125     GT:GQ:DP        1|1:95:30       1|1:35:25       1|1:100:71
+3      112923701       rs7640416       G       A       .       PASS    AA=A;DP=90      GT:GQ:DP        1|1:95:30       1|1:36:11       1|1:100:47
+17     2790582 rs2317468       T       C       .       PASS    AA=N;DP=85      GT:GQ:DP        1|1:95:30       1|1:38:11       1|1:100:37
+2      31391519        rs182290        T       A       .       PASS    AA=A;DP=105     GT:GQ:DP        1|1:95:30       1|1:39:17       1|1:100:58
+6      131554582       rs1190798       C       T       .       PASS    AA=T;DP=112     GT:GQ:DP        1|1:95:30       1|1:41:13       1|1:100:70
+3      60449419        rs430270        C       A       .       PASS    AA=A;DP=83      GT:GQ:DP        1|1:95:30       1|1:41:19       1|1:100:24
+5      85103547        rs1429048       C       A       .       PASS    AA=A;DP=107     GT:GQ:DP        1|1:95:30       1|1:41:19       1|1:100:58
+1      76886918        rs671578        G       T       .       PASS    AA=G;DP=104;HM2 GT:GQ:DP        1|1:95:30       1|1:44:13       1|1:100:61
+20     2315110 rs2422761       G       T       .       PASS    AA=G;DP=130     GT:GQ:DP        1|1:95:30       1|1:44:13       1|1:100:90
+16     75116310        rs5013016       T       C       .       PASS    AA=t;DP=110     GT:GQ:DP        1|1:95:30       1|1:44:14       1|1:100:62
+3      197020876       rs842459        T       C       .       PASS    AA=t;DP=110     GT:GQ:DP        1|1:95:30       1|1:44:14       1|1:100:63
+3      12218907        rs795001        A       G       .       PASS    AA=G;DP=119     GT:GQ:DP        1|1:95:30       1|1:44:19       1|1:100:69
+1      1468036 rs3766179       C       G       .       PASS    AA=G;DP=97      GT:GQ:DP        1|1:95:30       1|1:47:14       1|1:100:52
+11     116167036       rs2072560       T       C       .       PASS    AA=C;DP=112     GT:GQ:DP        1|1:95:30       1|1:47:15       1|1:100:69
+15     32145165        rs545484        C       G       .       PASS    AA=c;DP=124     GT:GQ:DP        1|1:95:30       1|1:48:24       1|1:100:73
+4      103373414       rs367659        T       C       .       PASS    AA=C;DP=126     GT:GQ:DP        1|1:95:30       1|1:48:27       1|1:100:69
+1      221356922       rs851134        C       T       .       PASS    AA=c;DP=94      GT:GQ:DP        1|1:95:30       1|1:50:15       1|1:100:41
+8      1291535 rs4876218       G       A       .       PASS    AA=G;DP=125     GT:GQ:DP        1|1:95:30       1|1:50:15       1|1:100:81
+22     48017629        rs2157238       T       C       .       PASS    AA=a;DP=97      GT:GQ:DP        1|1:95:30       1|1:50:16       1|1:100:43
+14     94812524        rs2144818       A       G       .       PASS    AA=G;DP=109     GT:GQ:DP        1|1:95:30       1|1:50:16       1|1:100:62
+18     20901268        rs4800204       C       T       .       PASS    AA=T;DP=90      GT:GQ:DP        1|1:95:30       1|1:53:16       1|1:100:45
+7      31608797        rs1990378       A       G       .       PASS    AA=a;DP=122     GT:GQ:DP        1|1:95:30       1|1:53:16       1|1:100:64
+4      1157387 rs4974567       A       G       .       PASS    AA=G;DP=124     GT:GQ:DP        1|1:95:30       1|1:53:16       1|1:100:75
+11     72215789        rs3862793       T       C       .       PASS    AA=t;DP=109     GT:GQ:DP        1|1:95:30       1|1:53:17       1|1:100:51
+9      101117838       rs701363        T       C       .       PASS    AA=C;DP=113     GT:GQ:DP        1|1:95:30       1|1:53:17       1|1:100:69
+8      88555379        rs395068        C       T       .       PASS    AA=T;DP=113     GT:GQ:DP        1|1:95:30       1|1:53:17       1|1:100:71
+3      136836456       rs9838905       C       A       .       PASS    AA=A;DP=128     GT:GQ:DP        1|1:95:30       1|1:53:17       1|1:100:84
+9      85202223        rs4111394       T       C       .       PASS    AA=C;DP=135     GT:GQ:DP        1|1:95:30       1|1:53:18       1|1:100:89
+6      51124390        rs1184745       T       G       .       PASS    AA=T;DP=120     GT:GQ:DP        1|1:95:30       1|1:54:29       1|1:100:59
+8      15190371        rs1993473       A       G       .       PASS    AA=G;DP=90      GT:GQ:DP        1|1:95:30       1|1:56:17       1|1:100:34
+2      224701400       rs4102100       G       A       .       PASS    AA=A;DP=100     GT:GQ:DP        1|1:95:30       1|1:56:17       1|1:100:40
+10     67684585        rs4746567       G       A       .       PASS    AA=A;DP=108     GT:GQ:DP        1|1:95:30       1|1:56:17       1|1:100:53
+15     41618389        rs2255410       G       A       .       PASS    AA=A;DP=101     GT:GQ:DP        1|1:95:30       1|1:56:17       1|1:100:55
+2      50468327        rs7574552       T       C       .       PASS    AA=T;DP=111     GT:GQ:DP        1|1:95:30       1|1:56:17       1|1:100:63
+10     131948198       rs1999109       G       A       .       PASS    AA=A;DP=125     GT:GQ:DP        1|1:95:30       1|1:56:17       1|1:100:79
+9      9741104 rs1746790       T       A       .       PASS    AA=A;DP=125     GT:GQ:DP        1|1:95:30       1|1:56:18       1|1:100:77
+15     34753878        rs2111013       C       T       .       PASS    AA=T;DP=105     GT:GQ:DP        1|1:95:30       1|1:59:19       1|1:100:51
+18     22517723        rs562562        G       A       .       PASS    AA=A;DP=117     GT:GQ:DP        1|1:95:30       1|1:59:19       1|1:100:71
+20     19233260        rs6035284       A       G       .       PASS    AA=G;DP=98      GT:GQ:DP        1|1:95:30       1|1:59:20       1|1:100:49
+18     40550258        rs3324  A       C       .       PASS    AA=A;DP=111     GT:GQ:DP        1|1:95:30       1|1:59:24       1|1:100:55
+3      112991463       rs4429600       A       G       .       PASS    AA=G;DP=112     GT:GQ:DP        1|1:95:30       1|1:60:24       1|1:100:47
+13     91092835        rs2182544       A       C       .       PASS    AA=N;DP=125     GT:GQ:DP        1|1:95:30       1|1:60:24       1|1:100:70
+2      151790361       rs289900        T       G       .       PASS    AA=T;DP=102     GT:GQ:DP        1|1:95:30       1|1:62:19       1|1:100:53
+2      39943014        rs6708332       A       G       .       PASS    AA=G;DP=109     GT:GQ:DP        1|1:95:30       1|1:62:19       1|1:100:60
+8      91403674        rs10956586      G       T       .       PASS    AA=T;DP=113     GT:GQ:DP        1|1:95:30       1|1:62:19       1|1:100:63
+5      29899120        rs1428343       T       A       .       PASS    AA=A;DP=114     GT:GQ:DP        1|1:95:30       1|1:62:19       1|1:100:67
+10     128855782       rs2483848       A       G       .       PASS    AA=G;DP=116     GT:GQ:DP        1|1:95:30       1|1:62:19       1|1:100:69
+22     41430523        rs4822187       G       A       .       PASS    AA=A;DP=109     GT:GQ:DP        1|1:95:30       1|1:62:21       1|1:100:58
+6      162231383       rs9355951       A       G       .       PASS    AA=G;DP=139     GT:GQ:DP        1|1:95:30       1|1:62:23       1|1:100:85
+14     73823031        rs929449        T       C       .       PASS    AA=C;DP=103     GT:GQ:DP        1|1:95:30       1|1:64:27       1|1:100:39
+4      113584283       rs231258        A       G       .       PASS    AA=G;DP=106     GT:GQ:DP        1|1:95:30       1|1:64:27       1|1:100:49
+3      194457556       rs6799059       C       T       .       PASS    AA=T;DP=120     GT:GQ:DP        1|1:95:30       1|1:65:20       1|1:100:67
+1      233629882       rs1416473       C       T       .       PASS    AA=T;DP=127;HM2 GT:GQ:DP        1|1:95:30       1|1:65:20       1|1:100:74
+1      182411733       rs7540770       T       C       .       PASS    AA=t;DP=141;HM2 GT:GQ:DP        1|1:95:30       1|1:65:20       1|1:100:88
+8      131483439       rs10090767      G       A       .       PASS    AA=g;DP=116     GT:GQ:DP        1|1:95:30       1|1:65:21       1|1:100:65
+8      98512705        rs2460232       C       G       .       PASS    AA=G;DP=119     GT:GQ:DP        1|1:95:30       1|1:65:22       1|1:100:64
+3      26754982        rs7432654       T       C       .       PASS    AA=C;DP=114     GT:GQ:DP        1|1:95:30       1|1:65:23       1|1:100:60
+1      74302830        rs1483789       A       G       .       PASS    AA=a;DP=104;HM2 GT:GQ:DP        1|1:95:30       1|1:68:21       1|1:100:46
+3      107271156       rs874439        A       G       .       PASS    AA=G;DP=108     GT:GQ:DP        1|1:95:30       1|1:68:21       1|1:100:60
+8      134325972       rs2929980       A       C       .       PASS    AA=C;DP=117     GT:GQ:DP        1|1:95:30       1|1:68:21       1|1:100:67
+1      184998560       rs2891254       A       G       .       PASS    AA=N;DP=137     GT:GQ:DP        1|1:95:30       1|1:68:21       1|1:100:86
+12     116765436       rs1867804       C       G       .       PASS    AA=N;DP=144     GT:GQ:DP        1|1:95:30       1|1:68:21       1|1:100:91
+18     8379239 rs59280133      C       T       .       PASS    AA=C;DP=112     GT:GQ:DP        1|1:95:30       1|1:70:32       1|1:100:37
+12     56710201        rs2720184       A       C       .       PASS    AA=C;DP=157     GT:GQ:DP        1|1:95:30       1|1:70:37       1|1:100:91
+16     24621380        rs9935217       C       T       .       PASS    AA=C;DP=109     GT:GQ:DP        1|1:95:30       1|1:71:22       1|1:100:46
+14     83086891        rs1007383       C       T       .       PASS    AA=C;DP=111     GT:GQ:DP        1|1:95:30       1|1:71:22       1|1:100:60
+2      196818295       rs7587494       A       G       .       PASS    AA=G;DP=130     GT:GQ:DP        1|1:95:30       1|1:71:22       1|1:100:74
+1      227277067       rs557979        T       C       .       PASS    AA=C;DP=133;HM2 GT:GQ:DP        1|1:95:30       1|1:71:22       1|1:100:80
+2      68512294        rs6419647       T       C       .       PASS    AA=T;DP=138     GT:GQ:DP        1|1:95:30       1|1:71:22       1|1:100:82
+20     17728921        rs2745821       T       G       .       PASS    AA=G;DP=135     GT:GQ:DP        1|1:95:30       1|1:71:22       1|1:100:84
+2      120627490       rs7584209       G       T       .       PASS    AA=T;DP=103     GT:GQ:DP        1|1:95:30       1|1:71:23       1|1:100:44
+6      12320247        rs220001        G       A       .       PASS    AA=A;DP=122     GT:GQ:DP        1|1:95:30       1|1:71:23       1|1:100:68
+2      152305029       rs6718252       T       C       .       PASS    AA=C;DP=115     GT:GQ:DP        1|1:95:30       1|1:71:24       1|1:100:59
+10     88556808        rs2125054       G       C       .       PASS    AA=C;DP=104     GT:GQ:DP        1|1:95:30       1|1:71:25       1|1:100:49
+8      66389138        rs9650150       G       T       .       PASS    AA=T;DP=109     GT:GQ:DP        1|1:95:30       1|1:74:23       1|1:100:46
+18     57145737        rs7232055       A       G       .       PASS    AA=a;DP=115     GT:GQ:DP        1|1:95:30       1|1:74:23       1|1:100:62
+6      45235130        rs1285033       C       G       .       PASS    AA=G;DP=126     GT:GQ:DP        1|1:95:30       1|1:74:23       1|1:100:72
+21     22129283        rs9983429       A       G       .       PASS    AA=G;DP=117     GT:GQ:DP        1|1:95:30       1|1:74:24       1|1:100:56
+2      177369226       rs1251031       T       C       .       PASS    AA=C;DP=113     GT:GQ:DP        1|1:95:30       1|1:74:24       1|1:100:60
+6      46949560        rs220674        C       T       .       PASS    AA=T;DP=113     GT:GQ:DP        1|1:95:30       1|1:74:25       1|1:100:57
+2      169176597       rs7587772       G       C       .       PASS    AA=C;DP=117     GT:GQ:DP        1|1:95:30       1|1:74:25       1|1:100:60
+2      38032638        rs4670800       G       A       .       PASS    AA=A;DP=129     GT:GQ:DP        1|1:95:30       1|1:74:25       1|1:100:63
+9      134286765       rs4560912       G       A       .       PASS    AA=A;DP=131     GT:GQ:DP        1|1:95:30       1|1:74:32       1|1:100:69
+5      44397542        rs339507        C       T       .       PASS    AA=T;DP=138     GT:GQ:DP        1|1:95:30       1|1:74:34       1|1:100:71
+14     94087062        rs2402478       T       C       .       PASS    AA=t;DP=124     GT:GQ:DP        1|1:95:30       1|1:76:33       1|1:100:55
+3      20649836        rs4337653       T       C       .       PASS    AA=C;DP=99      GT:GQ:DP        1|1:95:30       1|1:77:24       1|1:100:35
+19     15604169        rs1915386       G       A       .       PASS    AA=A;DP=102     GT:GQ:DP        1|1:95:30       1|1:77:24       1|1:100:40
+1      58056206        rs852757        C       T       .       PASS    AA=T;DP=104;HM3 GT:GQ:DP        1|1:95:30       1|1:77:24       1|1:100:50
+2      81503638        rs13398427      C       T       .       PASS    AA=T;DP=95      GT:GQ:DP        1|1:95:30       1|1:77:25       1|1:100:36
+2      119481140       rs4453705       A       T       .       PASS    AA=T;DP=115     GT:GQ:DP        1|1:95:30       1|1:77:25       1|1:100:60
+9      74082844        rs2871427       G       A       .       PASS    AA=A;DP=127     GT:GQ:DP        1|1:95:30       1|1:77:25       1|1:100:73
+18     33911399        rs16969649      C       T       .       PASS    AA=T;DP=118     GT:GQ:DP        1|1:95:30       1|1:78:31       1|1:100:44
+2      5746153 rs6432221       T       G       .       PASS    AA=G;DP=120     GT:GQ:DP        1|1:95:30       1|1:78:34       1|1:100:54
+2      33209252        rs1563183       C       T       .       PASS    AA=C;DP=108     GT:GQ:DP        1|1:95:30       1|1:80:26       1|1:100:55
+11     55940950        rs10896353      G       A       .       PASS    AA=A;DP=102     GT:GQ:DP        1|1:95:30       1|1:83:26       1|1:100:32
+14     51723271        rs4551959       C       T       .       PASS    AA=T;DP=114     GT:GQ:DP        1|1:95:30       1|1:83:26       1|1:100:57
+10     20175733        rs6482067       T       C       .       PASS    AA=C;DP=126     GT:GQ:DP        1|1:95:30       1|1:83:26       1|1:100:70
+9      37169379        rs7047479       C       T       .       PASS    AA=T;DP=124     GT:GQ:DP        1|1:95:30       1|1:83:27       1|1:100:65
+2      170939825       rs4028284       A       G       .       PASS    AA=G;DP=127     GT:GQ:DP        1|1:95:30       1|1:83:27       1|1:100:70
+15     97413836        rs2593029       C       T       .       PASS    AA=T;DP=125     GT:GQ:DP        1|1:95:30       1|1:83:27       1|1:100:71
+8      135831243       rs7013056       C       G       .       PASS    AA=G;DP=104     GT:GQ:DP        1|1:95:30       1|1:86:27       1|1:100:33
+5      101279321       rs6596187       C       T       .       PASS    AA=T;DP=129     GT:GQ:DP        1|1:95:30       1|1:86:27       1|1:100:68
+6      100334179       rs9376431       T       C       .       PASS    AA=C;DP=135     GT:GQ:DP        1|1:95:30       1|1:86:27       1|1:100:82
+8      3467372 rs2449226       T       G       .       PASS    AA=T;DP=128     GT:GQ:DP        1|1:95:30       1|1:86:28       1|1:100:61
+10     100730465       rs10883237      G       A       .       PASS    AA=A;DP=124     GT:GQ:DP        1|1:95:30       1|1:89:28       1|1:100:68
+18     19408022        rs1788826       G       A       .       PASS    AA=A;DP=131     GT:GQ:DP        1|1:95:30       1|1:89:29       1|1:100:72
+9      119747446       rs488101        C       T       .       PASS    AA=T;DP=122     GT:GQ:DP        1|1:95:30       1|1:92:29       1|1:100:66
+7      140283391       rs6976462       T       A       .       PASS    AA=A;DP=108     GT:GQ:DP        1|1:95:30       1|1:92:31       1|1:100:38
+4      36343323        rs1009026       A       T       .       PASS    AA=T;DP=132     GT:GQ:DP        1|1:95:30       1|1:95:30       1|1:100:72
+15     79430436        rs13329222      T       C       .       PASS    AA=C;DP=138     GT:GQ:DP        1|1:95:30       1|1:96:39       1|1:100:71
+10     64483168        rs2495003       C       T       .       PASS    AA=T;DP=129     GT:GQ:DP        1|1:95:30       1|1:98:32       1|1:100:65
+1      213502704       rs10746457      T       C       .       PASS    AA=C;DP=155;HM2 GT:GQ:DP        1|1:95:31       1|1:100:37      1|1:100:48
+7      157871913       rs4562259       C       G       .       PASS    AA=A;DP=85      GT:GQ:DP        1|1:95:31       1|1:20:10       1|1:92:46
+5      137958045       rs6596441       G       T       .       PASS    AA=T;DP=122     GT:GQ:DP        1|1:95:31       1|1:35:21       1|1:100:70
+16     17520991        rs4781968       G       C       .       PASS    AA=C;DP=111     GT:GQ:DP        1|1:95:31       1|1:37:21       1|1:100:55
+11     17699257        rs10832853      G       C       .       PASS    AA=g;DP=143     GT:GQ:DP        1|1:95:31       1|1:38:11       1|1:100:46
+18     53853219        rs4941276       C       T       .       PASS    AA=T;DP=97      GT:GQ:DP        1|1:95:31       1|1:41:12       1|1:100:56
+5      2223252 rs4866622       A       C       .       PASS    AA=C;DP=100     GT:GQ:DP        1|1:95:31       1|1:41:12       1|1:100:57
+10     97969654        rs4917722       C       T       .       PASS    AA=T;DP=127     GT:GQ:DP        1|1:95:31       1|1:41:12       1|1:100:84
+3      7128339 rs6777701       A       G       .       PASS    AA=A;DP=131     GT:GQ:DP        1|1:95:31       1|1:42:18       1|1:100:37
+3      195612014       rs12632100      A       G       .       PASS    AA=A;DP=122     GT:GQ:DP        1|1:95:31       1|1:43:24       1|1:100:68
+16     2577284 rs7201584       T       C       .       PASS    AA=t;DP=106     GT:GQ:DP        1|1:95:31       1|1:44:13       1|1:100:63
+18     50148111        rs1657911       G       C       .       PASS    AA=C;DP=72      GT:GQ:DP        1|1:95:31       1|1:44:14       1|1:100:19
+2      117825402       rs334860        A       G       .       PASS    AA=G;DP=121     GT:GQ:DP        1|1:95:31       1|1:44:20       1|1:100:70
+7      15285739        rs4624927       C       G       .       PASS    AA=N;DP=138     GT:GQ:DP        1|1:95:31       1|1:46:25       1|1:100:75
+4      107883810       rs989435        G       A       .       PASS    AA=G;DP=96      GT:GQ:DP        1|1:95:31       1|1:47:14       1|1:100:52
+12     111909876       rs1293765       T       C       .       PASS    AA=C;DP=124     GT:GQ:DP        1|1:95:31       1|1:49:22       1|1:100:74
+11     38774549        rs7928040       C       A       .       PASS    AA=C;DP=109     GT:GQ:DP        1|1:95:31       1|1:50:15       1|1:100:63
+2      874657  rs7421878       A       T       .       PASS    AA=T;DP=136     GT:GQ:DP        1|1:95:31       1|1:50:16       1|1:100:86
+8      57667059        rs2670057       A       G       .       PASS    AA=G;DP=117     GT:GQ:DP        1|1:95:31       1|1:50:17       1|1:100:70
+5      179850803       rs6860647       T       C       .       PASS    AA=N;DP=131     GT:GQ:DP        1|1:95:31       1|1:53:16       1|1:100:61
+10     97314117        rs7070798       T       C       .       PASS    AA=T;DP=113     GT:GQ:DP        1|1:95:31       1|1:53:16       1|1:100:67
+7      2579568 rs2304540       G       C       .       PASS    AA=C;DP=138     GT:GQ:DP        1|1:95:31       1|1:53:18       1|1:100:45
+8      88765981        rs7459698       G       A       .       PASS    AA=A;DP=126     GT:GQ:DP        1|1:95:31       1|1:56:17       1|1:100:75
+16     64578905        rs3912987       G       A       .       PASS    AA=G;DP=111     GT:GQ:DP        1|1:95:31       1|1:56:18       1|1:100:64
+4      7548643 rs4689762       T       C       .       PASS    AA=C;DP=118     GT:GQ:DP        1|1:95:31       1|1:56:18       1|1:100:72
+2      3162937 rs6751452       T       G       .       PASS    AA=T;DP=127     GT:GQ:DP        1|1:95:31       1|1:56:18       1|1:100:76
+10     14270123        rs4748091       G       A       .       PASS    AA=A;DP=129     GT:GQ:DP        1|1:95:31       1|1:56:27       1|1:100:71
+2      43958429        rs6544718       T       C       .       PASS    AA=C;DP=114     GT:GQ:DP        1|1:95:31       1|1:59:18       1|1:100:65
+5      33200323        rs7707609       C       T       .       PASS    AA=T;DP=118     GT:GQ:DP        1|1:95:31       1|1:59:18       1|1:100:69
+2      208928402       rs10208191      G       T       .       PASS    AA=G;DP=128     GT:GQ:DP        1|1:95:31       1|1:59:18       1|1:100:70
+9      113463254       rs4979031       G       A       .       PASS    AA=G;DP=136     GT:GQ:DP        1|1:95:31       1|1:59:18       1|1:100:91
+16     17297066        rs4780699       C       T       .       PASS    AA=T;DP=124     GT:GQ:DP        1|1:95:31       1|1:60:26       1|1:100:69
+4      131997623       rs1038043       A       G       .       PASS    AA=a;DP=103     GT:GQ:DP        1|1:95:31       1|1:62:19       1|1:100:54
+5      56168384        rs2591949       T       C       .       PASS    AA=C;DP=128     GT:GQ:DP        1|1:95:31       1|1:62:20       1|1:100:78
+10     62912865        rs2787726       C       T       .       PASS    AA=T;DP=125     GT:GQ:DP        1|1:95:31       1|1:64:25       1|1:100:68
+3      128225271       rs1036136       A       G       .       PASS    AA=N;DP=119     GT:GQ:DP        1|1:95:31       1|1:65:20       1|1:100:58
+1      198456147       rs2885822       A       C       .       PASS    AA=C;DP=111;HM2;HM3     GT:GQ:DP        1|1:95:31       1|1:65:20       1|1:100:63
+19     20618816        rs10425311      C       A       .       PASS    AA=a;DP=131     GT:GQ:DP        1|1:95:31       1|1:65:20       1|1:100:80
+8      114153743       rs7829954       G       A       .       PASS    AA=A;DP=100     GT:GQ:DP        1|1:95:31       1|1:65:21       1|1:100:47
+5      16031062        rs13357073      A       G       .       PASS    AA=A;DP=94      GT:GQ:DP        1|1:95:31       1|1:68:21       1|1:100:29
+8      32324367        rs1714426       T       C       .       PASS    AA=C;DP=133     GT:GQ:DP        1|1:95:31       1|1:68:21       1|1:100:38
+4      153217322       rs6852045       T       A       .       PASS    AA=A;DP=105     GT:GQ:DP        1|1:95:31       1|1:68:21       1|1:100:54
+21     30118125        rs466884        A       G       .       PASS    AA=G;DP=115     GT:GQ:DP        1|1:95:31       1|1:68:22       1|1:100:59
+17     40028362        rs7218202       G       A       .       PASS    AA=N;DP=123     GT:GQ:DP        1|1:95:31       1|1:68:22       1|1:100:69
+3      155293682       rs1358405       A       G       .       PASS    AA=G;DP=122     GT:GQ:DP        1|1:95:31       1|1:68:27       1|1:100:65
+10     67428857        rs10996818      T       A       .       PASS    AA=T;DP=110     GT:GQ:DP        1|1:95:31       1|1:69:29       1|1:100:39
+6      73814907        rs10455090      C       G       .       PASS    AA=G;DP=123     GT:GQ:DP        1|1:95:31       1|1:71:22       1|1:100:66
+17     36077727        rs8076587       C       G       .       PASS    AA=G;DP=103     GT:GQ:DP        1|1:95:31       1|1:74:23       1|1:100:35
+4      13737318        rs6819428       A       G       .       PASS    AA=A;DP=140     GT:GQ:DP        1|1:95:31       1|1:74:23       1|1:100:85
+2      220357241       rs6436167       T       A       .       PASS    AA=A;DP=140     GT:GQ:DP        1|1:95:31       1|1:74:24       1|1:100:81
+17     62288124        rs3848412       T       C       .       PASS    AA=t;DP=105     GT:GQ:DP        1|1:95:31       1|1:74:25       1|1:100:48
+18     62976422        rs9955863       T       A       .       PASS    AA=A;DP=119     GT:GQ:DP        1|1:95:31       1|1:74:26       1|1:100:64
+2      42734996        rs10208367      T       C       .       PASS    AA=t;DP=129     GT:GQ:DP        1|1:95:31       1|1:77:24       1|1:100:76
+15     91094383        rs7179199       C       A       .       PASS    AA=A;DP=119     GT:GQ:DP        1|1:95:31       1|1:77:30       1|1:100:59
+11     81035011        rs1945704       C       T       .       PASS    AA=T;DP=118     GT:GQ:DP        1|1:95:31       1|1:80:26       1|1:100:57
+10     50178378        rs7917738       A       G       .       PASS    AA=G;DP=128     GT:GQ:DP        1|1:95:31       1|1:80:27       1|1:100:70
+1      48094132        rs877295        C       T       .       PASS    AA=c;DP=143;HM2 GT:GQ:DP        1|1:95:31       1|1:83:26       1|1:100:86
+11     69041441        rs559664        A       G       .       PASS    AA=G;DP=153     GT:GQ:DP        1|1:95:31       1|1:86:27       1|1:100:98
+3      143432291       rs4078182       T       C       .       PASS    AA=C;DP=133     GT:GQ:DP        1|1:95:31       1|1:86:28       1|1:100:74
+9      21739663        rs9298824       T       C       .       PASS    AA=C;DP=119     GT:GQ:DP        1|1:95:31       1|1:89:28       1|1:100:50
+17     10015026        rs2904910       C       T       .       PASS    AA=T;DP=133     GT:GQ:DP        1|1:95:31       1|1:89:29       1|1:100:67
+4      147206883       rs11100909      T       C       .       PASS    AA=C;DP=151     GT:GQ:DP        1|1:95:31       1|1:95:32       1|1:100:89
+6      74789761        rs4128330       T       C       .       PASS    AA=C;DP=138     GT:GQ:DP        1|1:95:31       1|1:95:38       1|1:100:69
+14     95613816        rs1951804       C       T       .       PASS    AA=T;DP=144     GT:GQ:DP        1|1:95:31       1|1:98:31       1|1:100:83
+16     86674392        rs6540166       A       G       .       PASS    AA=G;DP=134     GT:GQ:DP        1|1:95:32       1|1:27:20       1|1:100:83
+2      23228141        rs13429604      T       C       .       PASS    AA=C;DP=123     GT:GQ:DP        1|1:95:32       1|1:40:16       1|1:100:75
+5      114999221       rs256955        G       A       .       PASS    AA=A;DP=145     GT:GQ:DP        1|1:95:32       1|1:51:28       1|1:100:88
+20     58684096        rs1201883       A       G       .       PASS    AA=G;DP=130     GT:GQ:DP        1|1:95:32       1|1:66:32       1|1:100:65
+8      101061635       rs6468702       A       G       .       PASS    AA=G;DP=111     GT:GQ:DP        1|1:95:32       1|1:67:27       1|1:100:51
+10     11984182        rs11257407      A       G       .       PASS    AA=G;DP=118     GT:GQ:DP        1|1:95:32       1|1:68:21       1|1:100:65
+15     61611437        rs7403729       C       T       .       PASS    AA=T;DP=98      GT:GQ:DP        1|1:95:32       1|1:68:22       1|1:100:45
+20     46311741        rs226841        A       G       .       PASS    AA=G;DP=105     GT:GQ:DP        1|1:95:32       1|1:77:24       1|1:100:49
+18     49628585        rs7238305       C       T       .       PASS    AA=T;DP=124     GT:GQ:DP        1|1:95:32       1|1:80:25       1|1:100:67
+8      18074271        rs2040469       C       T       .       PASS    AA=.;DP=122     GT:GQ:DP        1|1:95:32       1|1:89:29       1|1:100:63
+20     31626382        rs6059378       A       G       .       PASS    AA=N;DP=115     GT:GQ:DP        1|1:95:32       1|1:95:30       1|1:100:42
+13     103427319       rs2806800       G       A       .       PASS    AA=A;DP=98      GT:GQ:DP        1|1:95:33       1|1:27:18       1|1:100:42
+18     62257609        rs1704824       T       C       .       PASS    AA=t;DP=88      GT:GQ:DP        1|1:95:33       1|1:38:11       1|1:100:40
+5      55801915        rs18318 A       G       .       PASS    AA=G;DP=108     GT:GQ:DP        1|1:95:33       1|1:44:14       1|1:100:62
+7      77219308        rs10225586      C       G       .       PASS    AA=G;DP=107     GT:GQ:DP        1|1:95:33       1|1:56:18       1|1:100:58
+4      82970231        rs6848420       A       G       .       PASS    AA=A;DP=108     GT:GQ:DP        1|1:95:34       1|1:40:19       1|1:100:54
+16     8888576 rs30779 A       T       .       PASS    AA=C;DP=101     GT:GQ:DP        1|1:95:34       1|1:41:17       1|1:100:37
+7      45978978        rs788707        T       C       .       PASS    AA=T;DP=114     GT:GQ:DP        1|1:95:34       1|1:47:15       1|1:100:54
+16     74220384        rs41505349      C       T       .       PASS    AA=T;DP=129     GT:GQ:DP        1|1:95:36       1|1:56:17       1|1:100:78
+14     76278530        rs8017527       C       A       .       PASS    AA=A;DP=89      GT:GQ:DP        1|1:95:37       1|1:18:9        1|1:100:33
+2      130121143       rs3109246       G       A       .       PASS    AA=G;DP=127     GT:GQ:DP        1|1:95:37       1|1:45:19       1|1:100:71
+3      141642763       rs10804674      C       T       .       PASS    AA=T;DP=140     GT:GQ:DP        1|1:95:37       1|1:86:29       1|1:100:76
+11     92041329        rs507032        G       C       .       PASS    AA=C;DP=135     GT:GQ:DP        1|1:95:38       0|1:100:24      1|0:100:72
+2      128052737       rs6706077       A       G       .       PASS    AA=G;DP=152     GT:GQ:DP        1|1:95:38       1|1:54:23       1|1:100:51
+1      112631568       rs3121993       C       A       .       PASS    AA=c;DP=118     GT:GQ:DP        1|1:95:39       0|1:100:26      1|0:100:55
+6      53311053        rs9349664       T       A       .       PASS    AA=A;DP=150     GT:GQ:DP        1|1:95:39       0|1:100:36      1|0:100:76
+3      34467272        rs1529080       G       T       .       PASS    AA=T;DP=140     GT:GQ:DP        1|1:95:39       1|1:38:22       1|1:100:78
+10     82078682        rs1340384       T       A       .       PASS    AA=T;DP=138     GT:GQ:DP        1|1:95:39       1|1:59:20       1|1:100:78
+14     53714390        rs811134        A       C       .       PASS    AA=C;DP=132     GT:GQ:DP        1|1:95:40       1|1:34:22       1|1:100:72
+12     126502134       rs9783430       G       C       .       PASS    AA=G;DP=153     GT:GQ:DP        1|1:95:41       0|0:87:30       1|0:100:84
+20     38161992        rs6101843       T       C       .       PASS    AA=T;DP=155     GT:GQ:DP        1|1:95:42       1|1:80:26       1|1:100:81
+11     124253047       rs7933204       G       A       .       PASS    AA=A;DP=118     GT:GQ:DP        1|1:96:32       1|0:100:16      1|1:100:72
+2      173350483       rs1863173       C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        1|1:96:32       1|0:100:16      1|1:100:74
+19     42212044        rs2562605       G       A       .       PASS    AA=A;DP=102     GT:GQ:DP        1|1:96:32       1|0:100:17      1|1:100:55
+5      125964298       rs2306620       A       G       .       PASS    AA=A;DP=100     GT:GQ:DP        1|1:96:32       1|0:100:18      1|1:100:50
+17     62495370        rs7209433       A       G       .       PASS    AA=G;DP=131     GT:GQ:DP        1|1:96:32       1|0:100:19      1|1:100:80
+7      16345990        rs2158490       T       A       .       PASS    AA=A;DP=110     GT:GQ:DP        1|1:96:32       1|0:100:20      1|1:100:58
+8      57919982        rs2317765       G       A       .       PASS    AA=G;DP=142     GT:GQ:DP        1|1:96:32       1|0:100:20      1|1:100:89
+7      145333138       rs10226110      T       C       .       PASS    AA=C;DP=114     GT:GQ:DP        1|1:96:32       1|0:100:22      1|1:100:47
+9      92657445        rs290207        T       C       .       PASS    AA=C;DP=106     GT:GQ:DP        1|1:96:32       1|0:100:22      1|1:100:53
+12     128901905       rs10744435      T       C       .       PASS    AA=T;DP=122     GT:GQ:DP        1|1:96:32       1|0:100:22      1|1:100:68
+20     21719909        rs2224366       G       C       .       PASS    AA=G;DP=124     GT:GQ:DP        1|1:96:32       1|0:100:23      1|1:100:57
+12     9409710 rs759893        A       C       .       PASS    AA=A;DP=120     GT:GQ:DP        1|1:96:32       1|0:100:24      1|1:100:63
+4      172996431       rs495917        A       C       .       PASS    AA=A;DP=144     GT:GQ:DP        1|1:96:32       1|0:100:24      1|1:100:86
+3      149305910       rs9866362       G       A       .       PASS    AA=G;DP=146     GT:GQ:DP        1|1:96:32       1|0:100:24      1|1:100:88
+16     13406957        rs8044236       G       T       .       PASS    AA=T;DP=148     GT:GQ:DP        1|1:96:32       1|0:100:26      1|1:100:88
+5      137399357       rs10515497      C       T       .       PASS    AA=C;DP=141     GT:GQ:DP        1|1:96:32       1|0:100:27      1|1:100:81
+11     95484339        rs4753728       G       T       .       PASS    AA=T;DP=127     GT:GQ:DP        1|1:96:32       1|0:100:28      1|1:100:66
+3      60188247        rs9810084       T       C       .       PASS    AA=T;DP=115     GT:GQ:DP        1|1:96:32       1|0:100:29      1|1:100:53
+4      176360490       rs582715        A       G       .       PASS    AA=A;DP=128     GT:GQ:DP        1|1:96:32       1|0:100:30      1|1:100:65
+2      28540547        rs2940790       A       C       .       PASS    AA=C;DP=155     GT:GQ:DP        1|1:96:32       1|0:100:30      1|1:100:93
+6      46568279        rs1527695       T       G       .       PASS    AA=G;DP=124     GT:GQ:DP        1|1:96:32       1|0:100:32      1|1:100:58
+12     29176844        rs11050071      G       A       .       PASS    AA=A;DP=126     GT:GQ:DP        1|1:96:32       1|0:100:32      1|1:100:63
+10     92080765        rs7905472       C       T       .       PASS    AA=T;DP=137     GT:GQ:DP        1|1:96:32       1|0:100:32      1|1:100:74
+8      112841466       rs7843064       A       G       .       PASS    AA=G;DP=113     GT:GQ:DP        1|1:96:32       1|0:100:36      1|1:100:39
+19     11127584        rs892114        A       G       .       PASS    AA=G;DP=104     GT:GQ:DP        1|1:96:32       1|0:36:13       1|1:100:58
+4      171346186       rs10009954      A       T       .       PASS    AA=A;DP=130     GT:GQ:DP        1|1:96:32       1|0:37:17       1|1:100:83
+7      50915551        rs56025941      G       C       .       PASS    AA=G;DP=121     GT:GQ:DP        1|1:96:32       1|0:56:24       1|1:100:65
+2      240417694       rs60947525      C       T       .       PASS    AA=C;DP=121     GT:GQ:DP        1|1:96:32       1|0:65:17       1|1:100:61
+3      135525395       rs7613440       A       C       .       PASS    AA=A;DP=91      GT:GQ:DP        1|1:96:32       1|0:66:13       1|1:42:45
+13     48246869        rs1868550       G       C       .       PASS    AA=C;DP=120     GT:GQ:DP        1|1:96:32       1|0:93:17       1|1:100:73
+3      22338724        rs57080882      T       C       .       PASS    AA=T;DP=97      GT:GQ:DP        1|1:96:32       1|0:94:14       1|1:95:51
+1      231842135       rs4649240       C       T       .       PASS    AA=T;DP=140;HM2;HM3     GT:GQ:DP        1|1:96:32       1|0:97:27       1|1:100:80
+11     117451901       rs1786189       T       C       .       PASS    AA=T;DP=135     GT:GQ:DP        1|1:96:32       1|1:65:20       1|1:100:82
+22     29977094        rs4820043       A       G       .       PASS    AA=G;DP=125     GT:GQ:DP        1|1:96:32       1|1:65:21       1|1:100:72
+2      240088931       rs1564973       C       T       .       PASS    AA=C;DP=110     GT:GQ:DP        1|1:96:33       0|1:100:16      1|0:100:49
+3      116589042       rs6414261       T       C       .       PASS    AA=C;DP=115     GT:GQ:DP        1|1:96:33       0|1:100:20      1|0:100:63
+10     100630364       rs2862449       C       T       .       PASS    AA=T;DP=122     GT:GQ:DP        1|1:96:33       0|1:100:20      1|0:100:72
+5      68810722        rs4274940       A       G       .       PASS    AA=A;DP=119     GT:GQ:DP        1|1:96:33       0|1:100:22      1|0:100:64
+1      5933716 rs6702707       C       T       .       PASS    AA=T;DP=128;HM2;HM3     GT:GQ:DP        1|1:96:33       0|1:100:22      1|0:100:74
+10     125052237       .       T       C       .       PASS    AA=T;DP=113     GT:GQ:DP        1|1:96:33       0|1:100:23      1|0:100:57
+4      10890166        .       C       T       .       PASS    AA=C;DP=133     GT:GQ:DP        1|1:96:33       0|1:100:24      1|0:100:79
+7      158035191       rs10279869      G       A       .       PASS    AA=A;DP=151     GT:GQ:DP        1|1:96:33       0|1:100:27      1|0:100:55
+7      155733817       rs1733657       A       G       .       PASS    AA=G;DP=128     GT:GQ:DP        1|1:96:33       0|1:100:27      1|0:100:68
+8      66229087        rs10216394      A       G       .       PASS    AA=A;DP=151     GT:GQ:DP        1|1:96:33       0|1:100:28      1|0:100:49
+1      225399798       rs57454791      C       G       .       PASS    AA=C;DP=115     GT:GQ:DP        1|1:96:33       0|1:100:28      1|0:100:53
+2      198293332       rs10497807      G       C       .       PASS    AA=C;DP=133     GT:GQ:DP        1|1:96:33       0|1:100:28      1|0:100:72
+9      117488028       rs10982874      T       C       .       PASS    AA=C;DP=140     GT:GQ:DP        1|1:96:33       0|1:100:29      1|0:100:36
+5      102784613       rs13436676      C       A       .       PASS    AA=A;DP=134     GT:GQ:DP        1|1:96:33       0|1:100:29      1|0:100:71
+6      119551636       rs1008471       G       A       .       PASS    AA=A;DP=142     GT:GQ:DP        1|1:96:33       0|1:100:30      1|0:100:78
+11     19452506        rs2702724       A       G       .       PASS    AA=G;DP=155     GT:GQ:DP        1|1:96:33       0|1:100:30      1|0:100:93
+12     19633645        rs7295469       G       A       .       PASS    AA=N;DP=128     GT:GQ:DP        1|1:96:33       0|1:100:31      1|0:100:64
+1      21067097        rs2167811       A       G       .       PASS    AA=G;DP=150;HM2 GT:GQ:DP        1|1:96:33       0|1:100:35      1|0:100:40
+19     51628898        rs381927        A       C       .       PASS    AA=C;DP=108     GT:GQ:DP        1|1:96:33       0|1:56:25       1|0:100:38
+15     24923357        rs4377134       G       C       .       PASS    AA=C;DP=127     GT:GQ:DP        1|1:96:33       0|1:57:28       1|0:100:68
+2      42931247        rs11890952      G       C       .       PASS    AA=C;DP=114     GT:GQ:DP        1|1:96:33       0|1:60:13       1|0:92:55
+7      87940512        rs181070        T       G       .       PASS    AA=A;DP=125     GT:GQ:DP        1|1:96:33       0|1:78:21       1|0:100:70
+17     45506907        rs4793639       T       C       .       PASS    AA=C;DP=127     GT:GQ:DP        1|1:96:33       0|1:79:17       1|0:100:78
+8      119865824       rs4876860       G       T       .       PASS    AA=T;DP=145     GT:GQ:DP        1|1:96:33       0|1:83:18       1|0:100:67
+2      177270035       rs1355852       A       G       .       PASS    AA=G;DP=106     GT:GQ:DP        1|1:96:33       1|0:100:16      1|1:100:52
+15     34925551        rs4923727       A       G       .       PASS    AA=A;DP=130     GT:GQ:DP        1|1:96:33       1|0:100:18      1|1:100:81
+20     13706224        rs2209994       C       T       .       PASS    AA=C;DP=116     GT:GQ:DP        1|1:96:33       1|0:100:21      1|1:100:61
+18     70922006        rs6566057       A       G       .       PASS    AA=a;DP=125     GT:GQ:DP        1|1:96:33       1|0:100:21      1|1:100:70
+3      56758846        rs3821413       T       C       .       PASS    AA=C;DP=141     GT:GQ:DP        1|1:96:33       1|0:100:26      1|1:100:84
+15     33181819        rs6495752       A       G       .       PASS    AA=A;DP=119     GT:GQ:DP        1|1:96:33       1|0:100:27      1|1:100:62
+8      49833922        rs16938732      C       T       .       PASS    AA=C;DP=147     GT:GQ:DP        1|1:96:33       1|0:100:33      1|1:100:82
+1      205663107       rs311299        C       A       .       PASS    AA=C;DP=115;HM2;HM3     GT:GQ:DP        1|1:96:33       1|0:20:18       1|1:100:62
+6      137351630       rs1744069       G       C       .       PASS    AA=G;DP=120     GT:GQ:DP        1|1:96:33       1|0:46:17       1|1:100:69
+12     24174191        rs4963747       T       A       .       PASS    AA=T;DP=132     GT:GQ:DP        1|1:96:33       1|0:59:26       1|1:100:72
+9      109706230       rs1929276       A       G       .       PASS    AA=N;DP=139     GT:GQ:DP        1|1:96:33       1|0:60:16       1|1:100:38
+10     11825472        rs10795885      G       A       .       PASS    AA=C;DP=139     GT:GQ:DP        1|1:96:33       1|0:68:16       1|1:100:89
+17     48969027        .       G       A       .       PASS    AA=G;DP=132     GT:GQ:DP        1|1:96:33       1|0:81:25       1|1:100:74
+15     99578526        .       G       A       .       PASS    AA=A;DP=133     GT:GQ:DP        1|1:96:33       1|0:84:18       1|1:100:85
+9      131656317       rs10733700      C       T       .       PASS    AA=c;DP=127     GT:GQ:DP        1|1:96:33       1|0:85:13       1|1:100:77
+20     17566689        rs6034874       G       C       .       PASS    AA=G;DP=109     GT:GQ:DP        1|1:96:33       1|0:90:18       1|1:100:47
+10     16380943        rs1999643       T       G       .       PASS    AA=G;DP=110     GT:GQ:DP        1|1:96:34       0|1:100:21      1|0:100:57
+12     94840503        rs11108336      C       A       .       PASS    AA=A;DP=144     GT:GQ:DP        1|1:96:34       0|1:100:22      1|0:100:88
+11     5061770 rs10837299      C       T       .       PASS    AA=C;DP=120     GT:GQ:DP        1|1:96:34       0|1:100:30      1|0:100:54
+12     2005287 rs727528        A       G       .       PASS    AA=A;DP=147     GT:GQ:DP        1|1:96:34       0|1:100:30      1|0:100:82
+1      193310278       rs10921766      C       T       .       PASS    AA=C;DP=136;HM2 GT:GQ:DP        1|1:96:34       0|1:100:33      1|0:100:69
+3      127320781       rs12106774      A       G       .       PASS    AA=G;DP=141     GT:GQ:DP        1|1:96:34       0|1:100:36      1|0:100:71
+8      31218560        rs11988939      T       C       .       PASS    AA=T;DP=100     GT:GQ:DP        1|1:96:34       0|1:31:19       1|0:100:48
+1      9310665 rs11590191      C       T       .       PASS    AA=c;DP=150;HM3 GT:GQ:DP        1|1:96:34       0|1:70:17       1|0:100:53
+6      159572830       rs560990        A       T       .       PASS    AA=T;DP=127     GT:GQ:DP        1|1:96:34       0|1:80:21       1|0:100:74
+14     23405005        rs1957683       G       A       .       PASS    AA=A;DP=145     GT:GQ:DP        1|1:96:34       1|0:100:27      1|1:100:85
+3      131725137       rs13085273      C       T       .       PASS    AA=C;DP=132     GT:GQ:DP        1|1:96:34       1|0:100:27      1|1:96:33
+7      20246854        rs2041017       T       C       .       PASS    AA=T;DP=148     GT:GQ:DP        1|1:96:34       1|0:100:34      1|1:100:77
+3      154638240       rs9289912       G       A       .       PASS    AA=G;DP=110     GT:GQ:DP        1|1:96:34       1|0:73:23       1|1:100:53
+6      14748136        rs857427        C       T       .       PASS    AA=C;DP=128     GT:GQ:DP        1|1:96:34       1|0:83:23       1|1:100:72
+7      114153154       rs599661        A       C       .       PASS    AA=C;DP=102     GT:GQ:DP        1|1:96:34       1|0:96:17       1|1:96:51
+9      116876009       rs2210108       A       G       .       PASS    AA=G;DP=103     GT:GQ:DP        1|1:96:34       1|1:41:12       1|1:100:56
+7      54754794        rs11768496      T       G       .       PASS    AA=G;DP=143     GT:GQ:DP        1|1:96:35       0|1:100:22      1|0:100:89
+16     77355254        rs7204300       T       A       .       PASS    AA=T;DP=120     GT:GQ:DP        1|1:96:35       0|1:100:26      1|0:100:60
+13     93975690        rs9556395       G       C       .       PASS    AA=G;DP=105     GT:GQ:DP        1|1:96:35       0|1:62:21       1|0:100:47
+10     35587386        rs4298846       A       G       .       PASS    AA=G;DP=105     GT:GQ:DP        1|1:96:35       0|1:69:22       1|0:100:47
+1      202947113       rs10793717      C       T       .       PASS    AA=T;DP=128     GT:GQ:DP        1|1:96:35       0|1:71:18       1|0:100:72
+2      61020538        rs12713430      A       G       .       PASS    AA=G;DP=131     GT:GQ:DP        1|1:96:35       1|0:82:18       1|1:100:67
+12     48486113        rs2603111       C       T       .       PASS    AA=T;DP=131     GT:GQ:DP        1|1:96:36       0|1:100:22      1|0:100:72
+2      42625741        rs13027757      A       G       .       PASS    AA=a;DP=139     GT:GQ:DP        1|1:96:36       0|1:100:31      1|0:100:74
+13     33253764        rs4941770       C       T       .       PASS    AA=C;DP=105     GT:GQ:DP        1|1:96:36       1|1:47:14       1|1:100:55
+5      35354109        .       A       G       .       PASS    AA=a;DP=132     GT:GQ:DP        1|1:96:36       1|1:86:29       1|1:100:65
+11     19945063        rs4447157       G       T       .       PASS    AA=G;DP=145     GT:GQ:DP        1|1:96:37       1|1:86:27       1|1:100:85
+22     21536254        rs13053766      C       T       .       PASS    AA=t;DP=109     GT:GQ:DP        1|1:96:38       1|1:62:19       1|1:100:47
+21     35622929        rs8134849       T       A       .       PASS    AA=A;DP=122     GT:GQ:DP        1|1:96:38       1|1:62:23       1|1:100:61
+6      42242408        rs2492919       C       T       .       PASS    AA=T;DP=154     GT:GQ:DP        1|1:96:40       0|0:60:20       1|0:100:48
+19     35068483        rs162823        T       G       .       PASS    AA=A;DP=113     GT:GQ:DP        1|1:96:40       0|1:46:14       1|0:100:60
+2      23909195        rs9941520       A       C       .       PASS    AA=C;DP=151     GT:GQ:DP        1|1:96:40       1|1:72:37       1|1:100:74
+5      135575936       rs2287746       G       A       .       PASS    AA=G;DP=102     GT:GQ:DP        1|1:96:44       1|0:44:11       1|1:100:35
+17     9599718 rs6503244       C       G       .       PASS    AA=C;DP=150     GT:GQ:DP        1|1:96:45       0|1:86:27       1|0:100:76
+3      195717624       rs6437383       T       A       .       PASS    AA=A;DP=175     GT:GQ:DP        1|1:96:50       0|1:100:35      1|0:100:89
+12     124487034       rs2345232       A       G       .       PASS    AA=G;DP=119     GT:GQ:DP        1|1:97:32       1|1:77:24       1|1:100:52
+14     90832513        rs12050311      C       A       .       PASS    AA=C;DP=128     GT:GQ:DP        1|1:97:33       1|1:62:19       1|1:100:64
+7      105267385       rs10272675      C       T       .       PASS    AA=C;DP=149     GT:GQ:DP        1|1:97:34       0|0:100:41      1|0:100:37
+19     33603331        rs10419788      G       A       .       PASS    AA=G;DP=93      GT:GQ:DP        1|1:97:34       0|0:36:12       1|0:100:35
+5      68673264        rs7730569       A       G       .       PASS    AA=A;DP=105     GT:GQ:DP        1|1:97:34       0|0:48:17       1|0:100:53
+9      112178323       rs62571870      C       A       .       PASS    AA=C;DP=114     GT:GQ:DP        1|1:97:34       0|0:57:19       1|0:100:50
+1      23156530        .       C       T       .       PASS    AA=c;DP=106     GT:GQ:DP        1|1:97:34       0|0:57:19       1|0:100:54
+4      65683188        rs329442        T       G       .       PASS    AA=T;DP=112     GT:GQ:DP        1|1:97:34       0|0:60:20       1|0:100:58
+12     87674337        rs10083187      A       G       .       PASS    AA=G;DP=119     GT:GQ:DP        1|1:97:34       0|0:60:22       1|0:100:64
+20     58048772        rs6015626       A       G       .       PASS    AA=A;DP=141     GT:GQ:DP        1|1:97:34       0|0:62:28       1|0:100:79
+4      74818574        rs16849928      A       G       .       PASS    AA=A;DP=137     GT:GQ:DP        1|1:97:34       0|0:66:23       1|0:100:80
+4      102176914       rs10002927      C       A       .       PASS    AA=C;DP=138     GT:GQ:DP        1|1:97:34       0|0:72:24       1|0:100:82
+1      167156951       .       G       A       .       PASS    AA=G;DP=135     GT:GQ:DP        1|1:97:34       0|0:72:26       1|0:100:71
+4      120494109       rs62320722      C       T       .       PASS    AA=T;DP=129     GT:GQ:DP        1|1:97:34       0|0:76:29       1|0:100:67
+2      28869737        rs56342375      A       C       .       PASS    AA=A;DP=110     GT:GQ:DP        1|1:97:34       0|0:78:26       1|0:100:50
+15     68542235        rs4402514       C       G       .       PASS    AA=G;DP=123     GT:GQ:DP        1|1:97:34       0|0:78:26       1|0:100:63
+6      35569106        rs6925503       A       C       .       PASS    AA=N;DP=132     GT:GQ:DP        1|1:97:34       0|0:81:28       1|0:100:68
+6      136306519       .       C       T       .       PASS    AA=c;DP=141     GT:GQ:DP        1|1:97:34       0|0:86:33       1|0:100:74
+6      161626327       rs375689        C       T       .       PASS    AA=T;DP=163     GT:GQ:DP        1|1:97:34       0|0:96:44       1|0:100:80
+5      11440204        rs258827        T       C       .       PASS    AA=C;DP=133     GT:GQ:DP        1|1:97:34       1|1:80:29       1|1:100:70
+16     58183418        rs7193243       C       A       .       PASS    AA=C;DP=152     GT:GQ:DP        1|1:97:35       0|0:100:37      1|0:100:36
+2      109148221       rs7570494       A       C       .       PASS    AA=C;DP=130     GT:GQ:DP        1|1:97:35       0|0:23:22       1|0:100:72
+4      151293982       rs7662296       C       A       .       PASS    AA=A;DP=134     GT:GQ:DP        1|1:97:35       0|0:33:22       1|0:100:69
+13     59208682        rs2453863       T       A       .       PASS    AA=T;DP=121     GT:GQ:DP        1|1:97:35       0|0:54:19       1|0:100:64
+3      62688385        rs558835        A       G       .       PASS    AA=G;DP=121     GT:GQ:DP        1|1:97:35       0|0:60:22       1|0:100:64
+6      357594  rs58529500      C       T       .       PASS    AA=C;DP=145     GT:GQ:DP        1|1:97:35       0|0:67:28       1|0:100:82
+5      32035666        rs10461699      C       A       .       PASS    AA=A;DP=141     GT:GQ:DP        1|1:97:35       0|0:69:23       1|0:100:84
+5      111500440       rs57673629      A       G       .       PASS    AA=G;DP=147     GT:GQ:DP        1|1:97:35       0|0:69:23       1|0:100:88
+11     110328479       rs7951455       A       G       .       PASS    AA=G;DP=139     GT:GQ:DP        1|1:97:35       0|0:69:24       1|0:100:79
+13     64975233        rs9540451       T       C       .       PASS    AA=C;DP=101     GT:GQ:DP        1|1:97:35       0|0:84:28       1|0:100:32
+11     120330785       rs4936568       G       A       .       PASS    AA=G;DP=150     GT:GQ:DP        1|1:97:35       0|0:96:33       1|0:100:85
+15     84681454        rs12900184      T       A       .       PASS    AA=A;DP=126     GT:GQ:DP        1|1:97:36       0|0:69:23       1|0:100:69
+6      26507872        rs11966630      G       T       .       PASS    AA=G;DP=129     GT:GQ:DP        1|1:97:37       0|0:54:18       1|0:100:76
+4      160650525       rs13114173      A       G       .       PASS    AA=G;DP=147     GT:GQ:DP        1|1:97:37       1|1:41:23       1|1:100:89
+1      228947686       rs2478540       C       T       .       PASS    AA=T;DP=124;HM2;HM3     GT:GQ:DP        1|1:97:37       1|1:56:17       1|1:100:64
+1      17758748        rs7533813       T       C       .       PASS    AA=T;DP=108;HM2 GT:GQ:DP        1|1:97:40       0|0:57:19       1|0:100:39
+3      194405151       rs4687390       G       A       .       PASS    AA=A;DP=153     GT:GQ:DP        1|1:97:41       0|1:67:23       1|0:100:90
+20     39042840        rs4812473       C       T       .       PASS    AA=C;DP=169     GT:GQ:DP        1|1:97:43       0|1:100:25      1|0:100:58
+1      36362003        rs3845486       G       T       .       PASS    AA=G;DP=160     GT:GQ:DP        1|1:97:45       0|1:100:26      1|0:100:46
+8      110472874       rs1379370       A       G       .       PASS    AA=G;DP=126     GT:GQ:DP        1|1:98:31       1|1:100:33      1|1:100:52
+5      127905167       rs13173494      G       A       .       PASS    AA=-;DP=98      GT:GQ:DP        1|1:98:31       1|1:18:15       1|1:100:48
+2      236585452       rs7557693       G       A       .       PASS    AA=G;DP=101     GT:GQ:DP        1|1:98:31       1|1:23:16       1|1:100:54
+11     76351812        rs516367        T       C       .       PASS    AA=C;DP=121     GT:GQ:DP        1|1:98:31       1|1:26:7        1|1:100:82
+10     36005206        rs7922414       T       C       .       PASS    AA=C;DP=104     GT:GQ:DP        1|1:98:31       1|1:27:18       1|1:100:53
+1      149643872       rs6667714       T       C       .       PASS    AA=C;DP=115     GT:GQ:DP        1|1:98:31       1|1:29:19       1|1:100:57
+16     18040646        rs8057057       C       T       .       PASS    AA=T;DP=109     GT:GQ:DP        1|1:98:31       1|1:29:19       1|1:100:60
+20     56541722        rs6026335       T       C       .       PASS    AA=C;DP=115     GT:GQ:DP        1|1:98:31       1|1:31:20       1|1:100:67
+20     15756444        rs6034296       G       A       .       PASS    AA=A;DP=118     GT:GQ:DP        1|1:98:31       1|1:33:15       1|1:100:70
+4      47186576        rs10030956      T       G       .       PASS    AA=G;DP=98      GT:GQ:DP        1|1:98:31       1|1:34:17       1|1:100:49
+7      116667968       rs38897 T       A       .       PASS    AA=A;DP=134     GT:GQ:DP        1|1:98:31       1|1:35:21       1|1:100:81
+1      5737954 rs4557978       T       C       .       PASS    AA=t;DP=86      GT:GQ:DP        1|1:98:31       1|1:38:11       1|1:100:36
+19     49878805        rs2289494       G       C       .       PASS    AA=N;DP=100     GT:GQ:DP        1|1:98:31       1|1:38:11       1|1:100:57
+1      117559050       rs2063565       T       C       .       PASS    AA=C;DP=96;HM2;HM3      GT:GQ:DP        1|1:98:31       1|1:38:15       1|1:100:49
+2      44912856        rs341575        G       C       .       PASS    AA=C;DP=108     GT:GQ:DP        1|1:98:31       1|1:38:18       1|1:100:50
+3      119262744       rs2062510       T       C       .       PASS    AA=T;DP=101     GT:GQ:DP        1|1:98:31       1|1:39:18       1|1:100:39
+13     41836474        rs238280        T       C       .       PASS    AA=C;DP=114     GT:GQ:DP        1|1:98:31       1|1:41:13       1|1:100:61
+11     63837000        rs620645        A       G       .       PASS    AA=a;DP=138     GT:GQ:DP        1|1:98:31       1|1:41:23       1|1:100:85
+15     51007188        rs7182284       G       A       .       PASS    AA=A;DP=108     GT:GQ:DP        1|1:98:31       1|1:43:24       1|1:100:46
+7      144267759       rs2699482       A       G       .       PASS    AA=G;DP=86      GT:GQ:DP        1|1:98:31       1|1:44:13       1|1:100:41
+11     24454419        rs9971414       A       G       .       PASS    AA=G;DP=112     GT:GQ:DP        1|1:98:31       1|1:44:13       1|1:100:68
+2      70908964        rs2075223       A       G       .       PASS    AA=G;DP=112     GT:GQ:DP        1|1:98:31       1|1:44:13       1|1:100:71
+12     124732247       rs11058291      G       A       .       PASS    AA=A;DP=111     GT:GQ:DP        1|1:98:31       1|1:44:14       1|1:100:55
+5      27185945        rs13177778      G       C       .       PASS    AA=c;DP=98      GT:GQ:DP        1|1:98:31       1|1:47:14       1|1:100:43
+1      245319459       rs12144733      C       T       .       PASS    AA=C;DP=110;HM2;HM3     GT:GQ:DP        1|1:98:31       1|1:47:14       1|1:100:65
+18     43206229        rs1814375       T       C       .       PASS    AA=t;DP=119     GT:GQ:DP        1|1:98:31       1|1:47:15       1|1:100:70
+2      120922433       rs11903256      T       A       .       PASS    AA=A;DP=129     GT:GQ:DP        1|1:98:31       1|1:47:20       1|1:100:74
+22     44232388        rs1883187       T       C       .       PASS    AA=t;DP=132     GT:GQ:DP        1|1:98:31       1|1:49:21       1|1:100:78
+13     72740696        rs1536942       T       G       .       PASS    AA=G;DP=112     GT:GQ:DP        1|1:98:31       1|1:50:15       1|1:100:66
+17     33835225        rs6503608       C       T       .       PASS    AA=T;DP=117     GT:GQ:DP        1|1:98:31       1|1:50:15       1|1:100:70
+14     21267237        rs1997531       A       G       .       PASS    AA=A;DP=89      GT:GQ:DP        1|1:98:31       1|1:50:16       1|1:100:42
+1      243334695       rs4233442       C       T       .       PASS    AA=T;DP=111;HM2 GT:GQ:DP        1|1:98:31       1|1:50:16       1|1:100:65
+10     116065218       rs694883        A       G       .       PASS    AA=G;DP=126     GT:GQ:DP        1|1:98:31       1|1:50:16       1|1:100:82
+16     80055208        rs2317240       T       C       .       PASS    AA=T;DP=121     GT:GQ:DP        1|1:98:31       1|1:52:22       1|1:100:65
+21     27202193        rs151064        T       G       .       PASS    AA=G;DP=110     GT:GQ:DP        1|1:98:31       1|1:52:27       1|1:100:53
+2      85228643        rs2568218       T       G       .       PASS    AA=t;DP=137     GT:GQ:DP        1|1:98:31       1|1:52:27       1|1:100:80
+7      156724030       rs1182398       A       G       .       PASS    AA=G;DP=103     GT:GQ:DP        1|1:98:31       1|1:53:16       1|1:100:52
+13     113807010       rs28517873      G       A       .       PASS    AA=A;DP=101     GT:GQ:DP        1|1:98:31       1|1:53:17       1|1:100:55
+5      62803093        rs645465        T       A       .       PASS    AA=T;DP=115     GT:GQ:DP        1|1:98:31       1|1:53:18       1|1:100:64
+11     129741391       rs7947267       T       G       .       PASS    AA=G;DP=124     GT:GQ:DP        1|1:98:31       1|1:54:20       1|1:100:73
+11     111752702       rs1525414       T       G       .       PASS    AA=T;DP=128     GT:GQ:DP        1|1:98:31       1|1:55:30       1|1:100:54
+12     119052335       rs1005260       A       G       .       PASS    AA=G;DP=125     GT:GQ:DP        1|1:98:31       1|1:56:17       1|1:100:75
+10     92971156        rs7078260       G       C       .       PASS    AA=C;DP=112     GT:GQ:DP        1|1:98:31       1|1:56:18       1|1:100:63
+12     13227850        rs4763941       A       G       .       PASS    AA=G;DP=132     GT:GQ:DP        1|1:98:31       1|1:56:18       1|1:100:83
+7      144958669       rs2215345       T       G       .       PASS    AA=G;DP=116     GT:GQ:DP        1|1:98:31       1|1:58:29       1|1:100:60
+5      64543717        rs2112995       T       C       .       PASS    AA=C;DP=101     GT:GQ:DP        1|1:98:31       1|1:59:18       1|1:100:42
+9      6078815 rs340922        A       C       .       PASS    AA=C;DP=99      GT:GQ:DP        1|1:98:31       1|1:59:18       1|1:100:50
+6      56918498        rs1020548       G       A       .       PASS    AA=G;DP=116     GT:GQ:DP        1|1:98:31       1|1:59:18       1|1:100:64
+6      167030975       rs742268        G       C       .       PASS    AA=C;DP=134     GT:GQ:DP        1|1:98:31       1|1:59:18       1|1:100:86
+3      178966659       rs4857741       A       G       .       PASS    AA=G;DP=113     GT:GQ:DP        1|1:98:31       1|1:59:19       1|1:100:66
+5      16278181        rs1017492       T       C       .       PASS    AA=T;DP=126     GT:GQ:DP        1|1:98:31       1|1:59:19       1|1:100:77
+6      118800358       rs9320649       G       A       .       PASS    AA=G;DP=132     GT:GQ:DP        1|1:98:31       1|1:59:19       1|1:100:80
+14     61722426        rs8007423       C       T       .       PASS    AA=T;DP=130     GT:GQ:DP        1|1:98:31       1|1:59:19       1|1:100:81
+3      157699049       rs1608302       A       G       .       PASS    AA=G;DP=130     GT:GQ:DP        1|1:98:31       1|1:59:26       1|1:100:72
+9      6296061 rs3858051       G       A       .       PASS    AA=A;DP=142     GT:GQ:DP        1|1:98:31       1|1:60:30       1|1:100:72
+2      137339466       rs1649571       G       T       .       PASS    AA=G;DP=116     GT:GQ:DP        1|1:98:31       1|1:62:19       1|1:100:65
+1      179788006       rs10737233      A       G       .       PASS    AA=G;DP=123;HM2 GT:GQ:DP        1|1:98:31       1|1:62:19       1|1:100:74
+22     30909559        rs136429        A       G       .       PASS    AA=G;DP=96      GT:GQ:DP        1|1:98:31       1|1:62:20       1|1:100:46
+17     8856004 rs7221933       A       G       .       PASS    AA=N;DP=133     GT:GQ:DP        1|1:98:31       1|1:62:20       1|1:100:84
+7      152472394       rs10247433      A       G       .       PASS    AA=G;DP=116     GT:GQ:DP        1|1:98:31       1|1:63:27       1|1:100:47
+5      159041140       rs6889000       T       C       .       PASS    AA=t;DP=96      GT:GQ:DP        1|1:98:31       1|1:65:20       1|1:100:34
+14     66569469        rs7149905       G       A       .       PASS    AA=A;DP=116     GT:GQ:DP        1|1:98:31       1|1:65:20       1|1:100:66
+5      75039434        rs2307111       T       C       .       PASS    AA=C;DP=117     GT:GQ:DP        1|1:98:31       1|1:65:20       1|1:100:67
+8      4600748 rs1351106       T       C       .       PASS    AA=t;DP=121     GT:GQ:DP        1|1:98:31       1|1:65:20       1|1:100:70
+10     19926011        rs1409739       G       A       .       PASS    AA=A;DP=100     GT:GQ:DP        1|1:98:31       1|1:65:21       1|1:100:37
+5      156423731       rs4704843       A       G       .       PASS    AA=N;DP=119     GT:GQ:DP        1|1:98:31       1|1:65:21       1|1:100:71
+12     129639642       rs6486556       C       T       .       PASS    AA=T;DP=135     GT:GQ:DP        1|1:98:31       1|1:65:21       1|1:100:85
+1      22226864        .       C       T       .       PASS    AA=C;DP=99      GT:GQ:DP        1|1:98:31       1|1:65:22       1|1:100:38
+1      199485987       rs2096114       G       T       .       PASS    AA=T;DP=142;HM2;HM3     GT:GQ:DP        1|1:98:31       1|1:66:30       1|1:100:81
+4      96964718        rs6844584       C       G       .       PASS    AA=G;DP=95      GT:GQ:DP        1|1:98:31       1|1:68:21       1|1:100:36
+10     66466914        rs10740183      C       T       .       PASS    AA=T;DP=111     GT:GQ:DP        1|1:98:31       1|1:68:21       1|1:100:62
+14     59623804        rs308984        T       C       .       PASS    AA=T;DP=115     GT:GQ:DP        1|1:98:31       1|1:68:21       1|1:100:62
+4      131669886       rs2926414       A       G       .       PASS    AA=G;DP=121     GT:GQ:DP        1|1:98:31       1|1:68:21       1|1:100:62
+2      46198849        rs12616328      G       A       .       PASS    AA=A;DP=117     GT:GQ:DP        1|1:98:31       1|1:68:21       1|1:100:64
+18     11192931        rs1566192       T       C       .       PASS    AA=C;DP=124     GT:GQ:DP        1|1:98:31       1|1:68:22       1|1:100:69
+2      30863380        rs1915126       T       C       .       PASS    AA=C;DP=130     GT:GQ:DP        1|1:98:31       1|1:68:22       1|1:100:71
+10     32740082        rs10827050      C       G       .       PASS    AA=G;DP=114     GT:GQ:DP        1|1:98:31       1|1:68:23       1|1:100:61
+9      33273286        rs831274        G       C       .       PASS    AA=C;DP=148     GT:GQ:DP        1|1:98:31       1|1:70:30       1|1:100:48
+11     19625895        rs890139        T       G       .       PASS    AA=G;DP=118     GT:GQ:DP        1|1:98:31       1|1:71:22       1|1:100:66
+3      38038081        rs6422138       C       T       .       PASS    AA=T;DP=124     GT:GQ:DP        1|1:98:31       1|1:71:22       1|1:100:69
+1      81948570        rs483233        T       G       .       PASS    AA=G;DP=102;HM2;HM3     GT:GQ:DP        1|1:98:31       1|1:71:23       1|1:100:47
+6      117662810       rs646394        A       G       .       PASS    AA=C;DP=118     GT:GQ:DP        1|1:98:31       1|1:71:23       1|1:100:64
+2      7671331 rs2572151       A       G       .       PASS    AA=G;DP=134     GT:GQ:DP        1|1:98:31       1|1:71:23       1|1:100:79
+21     34425368        rs2834384       T       G       .       PASS    AA=G;DP=150     GT:GQ:DP        1|1:98:31       1|1:71:28       1|1:100:48
+1      242443123       rs871141        C       A       .       PASS    AA=A;DP=145;HM2 GT:GQ:DP        1|1:98:31       1|1:73:28       1|1:100:46
+5      73216037        rs34691025      A       G       .       PASS    AA=A;DP=164     GT:GQ:DP        1|1:98:31       1|1:74:23       1|1:100:106
+5      174835858       rs267350        T       C       .       PASS    AA=C;DP=133     GT:GQ:DP        1|1:98:31       1|1:74:23       1|1:100:75
+2      210482444       rs1541514       G       A       .       PASS    AA=A;DP=115     GT:GQ:DP        1|1:98:31       1|1:74:25       1|1:100:59
+1      230101819       rs821723        G       A       .       PASS    AA=A;DP=124;HM2 GT:GQ:DP        1|1:98:31       1|1:74:27       1|1:100:69
+4      163714157       rs1380733       A       G       .       PASS    AA=G;DP=144     GT:GQ:DP        1|1:98:31       1|1:74:29       1|1:100:74
+15     60863404        rs1498128       T       C       .       PASS    AA=C;DP=135     GT:GQ:DP        1|1:98:31       1|1:77:24       1|1:100:74
+8      134575645       rs10956708      G       A       .       PASS    AA=A;DP=133     GT:GQ:DP        1|1:98:31       1|1:77:24       1|1:100:79
+3      132946739       rs6801905       T       C       .       PASS    AA=T;DP=161     GT:GQ:DP        1|1:98:31       1|1:79:41       1|1:100:86
+20     45019696        rs1206763       T       C       .       PASS    AA=C;DP=109     GT:GQ:DP        1|1:98:31       1|1:80:25       1|1:100:40
+3      176172614       rs9854434       G       C       .       PASS    AA=C;DP=114     GT:GQ:DP        1|1:98:31       1|1:80:26       1|1:100:56
+5      73756211        rs463328        A       G       .       PASS    AA=G;DP=141     GT:GQ:DP        1|1:98:31       1|1:80:26       1|1:100:86
+12     43506707        rs4306333       C       G       .       PASS    AA=G;DP=108     GT:GQ:DP        1|1:98:31       1|1:83:27       1|1:100:51
+18     32519277        rs627756        G       A       .       PASS    AA=N;DP=133     GT:GQ:DP        1|1:98:31       1|1:83:27       1|1:100:76
+13     61829330        rs309089        A       G       .       PASS    AA=G;DP=122     GT:GQ:DP        1|1:98:31       1|1:86:29       1|1:100:62
+20     9020254 rs6039389       T       C       .       PASS    AA=T;DP=107     GT:GQ:DP        1|1:98:31       1|1:92:29       1|1:100:49
+1      91985823        rs284168        A       G       .       PASS    AA=G;DP=159;HM2 GT:GQ:DP        1|1:98:31       1|1:92:29       1|1:100:54
+5      36371922        rs1392457       A       G       .       PASS    AA=G;DP=137     GT:GQ:DP        1|1:98:31       1|1:92:29       1|1:100:79
+11     78724181        rs538821        T       C       .       PASS    AA=C;DP=141     GT:GQ:DP        1|1:98:31       1|1:92:31       1|1:100:80
+11     12836951        rs1371756       G       A       .       PASS    AA=A;DP=135     GT:GQ:DP        1|1:98:31       1|1:95:30       1|1:100:76
+2      19506383        rs703285        G       A       .       PASS    AA=A;DP=130     GT:GQ:DP        1|1:98:31       1|1:95:31       1|1:100:72
+22     28780492        rs193475        T       C       .       PASS    AA=C;DP=129     GT:GQ:DP        1|1:98:32       1|1:100:34      1|1:100:61
+18     9765372 rs6506697       A       G       .       PASS    AA=G;DP=155     GT:GQ:DP        1|1:98:32       1|1:100:35      1|1:100:90
+10     54072062        rs6480927       C       T       .       PASS    AA=T;DP=160     GT:GQ:DP        1|1:98:32       1|1:100:37      1|1:100:90
+15     59642214        rs4774408       T       G       .       PASS    AA=G;DP=113     GT:GQ:DP        1|1:98:32       1|1:22:17       1|1:100:63
+20     17277725        rs737141        C       T       .       PASS    AA=C;DP=136     GT:GQ:DP        1|1:98:32       1|1:24:17       1|1:100:85
+18     10755792        rs1881088       C       G       .       PASS    AA=G;DP=104     GT:GQ:DP        1|1:98:32       1|1:26:17       1|1:100:46
+8      10727042        rs11776674      G       A       .       PASS    AA=G;DP=97      GT:GQ:DP        1|1:98:32       1|1:28:13       1|1:100:52
+22     34982877        rs136148        C       T       .       PASS    AA=N;DP=123     GT:GQ:DP        1|1:98:32       1|1:29:19       1|1:100:75
+1      222074987       rs1415583       T       C       .       PASS    AA=C;DP=120     GT:GQ:DP        1|1:98:32       1|1:32:20       1|1:100:66
+7      93716651        rs10260624      G       C       .       PASS    AA=C;DP=114     GT:GQ:DP        1|1:98:32       1|1:35:25       1|1:100:57
+4      181858682       rs6828249       C       A       .       PASS    AA=C;DP=95      GT:GQ:DP        1|1:98:32       1|1:36:16       1|1:100:46
+2      195678727       rs1083372       T       C       .       PASS    AA=C;DP=125     GT:GQ:DP        1|1:98:32       1|1:38:11       1|1:100:81
+12     11741062        rs2954983       C       T       .       PASS    AA=T;DP=87      GT:GQ:DP        1|1:98:32       1|1:41:13       1|1:100:41
+12     131512020       rs4072416       A       G       .       PASS    AA=A;DP=116     GT:GQ:DP        1|1:98:32       1|1:41:14       1|1:100:68
+4      56600709        rs2702339       T       C       .       PASS    AA=C;DP=97      GT:GQ:DP        1|1:98:32       1|1:41:18       1|1:100:40
+11     56131029        rs1605927       A       G       .       PASS    AA=N;DP=112     GT:GQ:DP        1|1:98:32       1|1:44:13       1|1:100:67
+19     3008228 rs307716        A       C       .       PASS    AA=C;DP=129     GT:GQ:DP        1|1:98:32       1|1:44:13       1|1:100:84
+4      183994612       rs6820152       G       A       .       PASS    AA=A;DP=116     GT:GQ:DP        1|1:98:32       1|1:44:14       1|1:100:69
+16     86943604        rs28528911      T       C       .       PASS    AA=t;DP=92      GT:GQ:DP        1|1:98:32       1|1:47:15       1|1:100:35
+4      9442324 rs6449028       C       G       .       PASS    AA=G;DP=133     GT:GQ:DP        1|1:98:32       1|1:49:26       1|1:100:76
+18     33153257        rs590060        A       T       .       PASS    AA=A;DP=130     GT:GQ:DP        1|1:98:32       1|1:50:17       1|1:100:80
+3      144504546       rs9842051       G       C       .       PASS    AA=C;DP=116     GT:GQ:DP        1|1:98:32       1|1:53:16       1|1:100:66
+6      40356229        rs2182185       A       G       .       PASS    AA=G;DP=122     GT:GQ:DP        1|1:98:32       1|1:53:16       1|1:100:76
+5      95565292        rs4869273       C       T       .       PASS    AA=T;DP=128     GT:GQ:DP        1|1:98:32       1|1:57:26       1|1:100:71
+4      23842151        rs4235311       C       T       .       PASS    AA=T;DP=129     GT:GQ:DP        1|1:98:32       1|1:60:30       1|1:100:68
+17     71003489        rs11077792      G       A       .       PASS    AA=A;DP=150     GT:GQ:DP        1|1:98:32       1|1:62:19       1|1:100:57
+4      14014034        rs7656412       T       C       .       PASS    AA=C;DP=115     GT:GQ:DP        1|1:98:32       1|1:62:19       1|1:100:67
+2      8008686 rs41000 T       G       .       PASS    AA=t;DP=122     GT:GQ:DP        1|1:98:32       1|1:62:19       1|1:100:71
+22     48481817        rs738415        A       G       .       PASS    AA=G;DP=99      GT:GQ:DP        1|1:98:32       1|1:62:22       1|1:100:38
+18     2070483 rs561184        T       A       .       PASS    AA=T;DP=120     GT:GQ:DP        1|1:98:32       1|1:63:34       1|1:100:52
+11     126085463       rs3862634       A       G       .       PASS    AA=G;DP=107     GT:GQ:DP        1|1:98:32       1|1:65:20       1|1:100:54
+16     5684705 rs7199931       C       T       .       PASS    AA=T;DP=113     GT:GQ:DP        1|1:98:32       1|1:65:20       1|1:100:64
+2      9563839 rs7580419       C       T       .       PASS    AA=T;DP=105     GT:GQ:DP        1|1:98:32       1|1:65:21       1|1:100:53
+15     40408293        rs2578651       G       A       .       PASS    AA=A;DP=144     GT:GQ:DP        1|1:98:32       1|1:65:21       1|1:100:94
+14     100001096       rs4905960       T       C       .       PASS    AA=C;DP=113     GT:GQ:DP        1|1:98:32       1|1:68:21       1|1:100:61
+14     89992197        rs7155642       G       T       .       PASS    AA=T;DP=156     GT:GQ:DP        1|1:98:32       1|1:68:22       1|1:100:51
+5      83563726        rs991536        C       T       .       PASS    AA=T;DP=127     GT:GQ:DP        1|1:98:32       1|1:69:28       1|1:100:65
+12     2628980 rs216039        T       C       .       PASS    AA=T;DP=109     GT:GQ:DP        1|1:98:32       1|1:71:22       1|1:100:54
+1      99556479        rs2148154       A       G       .       PASS    AA=A;DP=113;HM2;HM3     GT:GQ:DP        1|1:98:32       1|1:71:23       1|1:100:58
+11     92259546        rs10765570      C       T       .       PASS    AA=T;DP=121     GT:GQ:DP        1|1:98:32       1|1:71:23       1|1:100:66
+6      90901757        rs2501721       T       C       .       PASS    AA=t;DP=133     GT:GQ:DP        1|1:98:32       1|1:71:24       1|1:100:78
+10     14213304        rs4750468       A       G       .       PASS    AA=a;DP=132     GT:GQ:DP        1|1:98:32       1|1:74:23       1|1:100:78
+13     19815390        rs944020        T       C       .       PASS    AA=C;DP=139     GT:GQ:DP        1|1:98:32       1|1:74:23       1|1:100:84
+5      84328876        rs2063367       T       C       .       PASS    AA=C;DP=111     GT:GQ:DP        1|1:98:32       1|1:74:24       1|1:100:56
+7      143264230       rs984764        A       G       .       PASS    AA=G;DP=130     GT:GQ:DP        1|1:98:32       1|1:77:24       1|1:100:76
+2      37548630        rs888097        A       C       .       PASS    AA=C;DP=125     GT:GQ:DP        1|1:98:32       1|1:77:25       1|1:100:57
+3      143826242       rs2140432       C       T       .       PASS    AA=T;DP=117     GT:GQ:DP        1|1:98:32       1|1:80:25       1|1:100:62
+12     28034217        rs1267208       T       C       .       PASS    AA=C;DP=127     GT:GQ:DP        1|1:98:32       1|1:86:27       1|1:100:70
+9      127626308       rs4258094       T       A       .       PASS    AA=A;DP=135     GT:GQ:DP        1|1:98:32       1|1:86:27       1|1:100:78
+17     69919533        rs2670818       T       C       .       PASS    AA=N;DP=123     GT:GQ:DP        1|1:98:32       1|1:86:28       1|1:100:62
+4      95721683        rs10856910      G       A       .       PASS    AA=A;DP=120     GT:GQ:DP        1|1:98:32       1|1:89:28       1|1:100:59
+5      133576727       rs4958177       T       C       .       PASS    AA=C;DP=133     GT:GQ:DP        1|1:98:32       1|1:89:30       1|1:100:71
+4      101723701       rs2567384       A       G       .       PASS    AA=A;DP=109     GT:GQ:DP        1|1:98:32       1|1:95:30       1|1:100:45
+18     43263424        rs7237150       G       A       .       PASS    AA=A;DP=124     GT:GQ:DP        1|1:98:32       1|1:95:30       1|1:100:62
+4      96408836        rs6847919       T       C       .       PASS    AA=T;DP=127     GT:GQ:DP        1|1:98:32       1|1:95:32       1|1:100:34
+2      141988136       rs6707441       A       G       .       PASS    AA=N;DP=135     GT:GQ:DP        1|1:98:32       1|1:95:32       1|1:100:73
+8      101740042       rs1693590       C       T       .       PASS    AA=T;DP=152     GT:GQ:DP        1|1:98:33       1|1:100:34      1|1:100:85
+17     58362494        rs6504142       G       T       .       PASS    AA=T;DP=101     GT:GQ:DP        1|1:98:33       1|1:23:11       1|1:100:58
+4      138364260       rs7679960       C       A       .       PASS    AA=C;DP=107     GT:GQ:DP        1|1:98:33       1|1:29:19       1|1:100:53
+1      59063615        rs2760470       C       T       .       PASS    AA=T;DP=123;HM2;HM3     GT:GQ:DP        1|1:98:33       1|1:44:13       1|1:100:78
+3      70796611        rs12638971      A       G       .       PASS    AA=a;DP=117     GT:GQ:DP        1|1:98:33       1|1:50:15       1|1:100:66
+3      157924797       rs193198        T       C       .       PASS    AA=T;DP=94      GT:GQ:DP        1|1:98:33       1|1:53:16       1|1:100:45
+14     40414289        rs11851379      C       G       .       PASS    AA=C;DP=109     GT:GQ:DP        1|1:98:33       1|1:56:17       1|1:100:59
+12     4637059 rs6489557       T       C       .       PASS    AA=C;DP=112     GT:GQ:DP        1|1:98:33       1|1:57:23       1|1:100:54
+6      146272147       rs3924502       T       C       .       PASS    AA=C;DP=118     GT:GQ:DP        1|1:98:33       1|1:59:19       1|1:100:59
+5      129212980       rs382982        G       A       .       PASS    AA=A;DP=120     GT:GQ:DP        1|1:98:33       1|1:65:20       1|1:100:70
+4      22165626        rs6448167       G       C       .       PASS    AA=C;DP=135     GT:GQ:DP        1|1:98:33       1|1:65:20       1|1:100:82
+2      181190990       rs11677526      A       G       .       PASS    AA=G;DP=122     GT:GQ:DP        1|1:98:33       1|1:68:27       1|1:100:63
+11     14055296        rs2618507       G       T       .       PASS    AA=T;DP=158     GT:GQ:DP        1|1:98:33       1|1:73:33       1|1:100:94
+18     49921963        rs1145306       C       G       .       PASS    AA=G;DP=112     GT:GQ:DP        1|1:98:33       1|1:74:26       1|1:100:56
+18     72431562        rs12956403      C       T       .       PASS    AA=C;DP=135     GT:GQ:DP        1|1:98:33       1|1:83:26       1|1:100:77
+21     16285567        rs420571        A       G       .       PASS    AA=G;DP=138     GT:GQ:DP        1|1:98:33       1|1:98:33       1|1:100:72
+2      181946895       rs908079        A       G       .       PASS    AA=A;DP=137     GT:GQ:DP        1|1:98:33       1|1:98:34       1|1:100:70
+12     117686683       rs4238056       T       G       .       PASS    AA=G;DP=119     GT:GQ:DP        1|1:98:34       1|0:100:25      1|1:100:61
+6      167591347       rs9356580       T       C       .       PASS    AA=C;DP=121     GT:GQ:DP        1|1:98:34       1|1:59:18       1|1:100:68
+2      218168866       rs2565686       C       T       .       PASS    AA=T;DP=115     GT:GQ:DP        1|1:98:34       1|1:83:27       1|1:100:55
+17     74093156        rs8067051       A       G       .       PASS    AA=a;DP=102     GT:GQ:DP        1|1:98:35       1|1:28:11       1|1:100:56
+13     28978825        rs2776985       C       T       .       PASS    AA=C;DP=107     GT:GQ:DP        1|1:98:35       1|1:50:18       1|1:100:44
+4      78650718        rs6533111       T       C       .       PASS    AA=C;DP=138     GT:GQ:DP        1|1:98:35       1|1:68:22       1|1:100:81
+2      48257603        rs973894        C       G       .       PASS    AA=N;DP=124     GT:GQ:DP        1|1:98:37       1|1:50:15       1|1:100:71
+10     115517617       rs58734589      C       T       .       PASS    AA=T;DP=160     GT:GQ:DP        1|1:98:38       0|0:80:35       1|0:100:88
+15     68295685        rs11072148      G       C       .       PASS    AA=G;DP=133     GT:GQ:DP        1|1:98:39       0|1:53:22       1|0:100:68
+10     71205823        rs2009819       T       A       .       PASS    AA=A;DP=161     GT:GQ:DP        1|1:98:39       1|1:71:23       1|1:100:53
+7      36255100        rs11762654      A       G       .       PASS    AA=A;DP=111     GT:GQ:DP        1|1:98:40       0|1:88:22       1|0:100:50
+4      161583290       rs1371255       A       G       .       PASS    AA=G;DP=151     GT:GQ:DP        1|1:98:40       0|1:97:33       1|0:100:81
+10     109028764       rs2066078       G       T       .       PASS    AA=T;DP=151     GT:GQ:DP        1|1:98:40       1|0:100:32      1|1:100:82
+19     62287016        rs7254575       G       T       .       PASS    AA=G;DP=126     GT:GQ:DP        1|1:98:41       0|0:63:21       1|0:100:67
+16     79964274        rs11640936      A       G       .       PASS    AA=a;DP=150     GT:GQ:DP        1|1:98:41       1|1:100:34      1|1:100:77
+15     77388553        rs35442171      T       A       .       PASS    AA=A;DP=142     GT:GQ:DP        1|1:98:42       1|1:68:23       1|1:100:77
+4      82488483        rs10017744      G       A       .       PASS    AA=A;DP=148     GT:GQ:DP        1|1:98:43       1|1:83:26       1|1:100:79
+1      205177511       rs291097        G       A       .       PASS    AA=G;DP=148;HM2;HM3     GT:GQ:DP        1|1:98:45       0|1:100:22      1|0:100:82
+15     72456768        rs7167038       C       T       .       PASS    AA=C;DP=99      GT:GQ:DP        1|1:99:33       1|0:100:11      1|1:100:44
+17     73322856        rs11650535      C       T       .       PASS    AA=C;DP=123     GT:GQ:DP        1|1:99:33       1|0:100:13      1|1:100:77
+9      1522360 rs7023012       T       A       .       PASS    AA=A;DP=122     GT:GQ:DP        1|1:99:33       1|0:100:15      1|1:100:74
+6      30268034        rs2284165       G       C       .       PASS    AA=C;DP=135     GT:GQ:DP        1|1:99:33       1|0:100:19      1|1:100:84
+5      143270708       rs170273        A       C       .       PASS    AA=C;DP=128     GT:GQ:DP        1|1:99:33       1|0:100:21      1|1:100:73
+4      6307812 rs4440299       T       G       .       PASS    AA=G;DP=139     GT:GQ:DP        1|1:99:33       1|0:100:21      1|1:100:85
+18     47134995        rs1902332       G       C       .       PASS    AA=C;DP=118     GT:GQ:DP        1|1:99:33       1|0:100:22      1|1:100:62
+12     113534551       rs11067205      C       T       .       PASS    AA=C;DP=124     GT:GQ:DP        1|1:99:33       1|0:100:24      1|1:100:66
+7      95101157        rs340   C       T       .       PASS    AA=T;DP=126     GT:GQ:DP        1|1:99:33       1|0:100:24      1|1:100:68
+1      66887818        rs1925342       C       A       .       PASS    AA=C;DP=137;HM2 GT:GQ:DP        1|1:99:33       1|0:100:26      1|1:100:77
+1      220618065       rs17461331      G       T       .       PASS    AA=T;DP=124     GT:GQ:DP        1|1:99:33       1|0:100:28      1|1:100:64
+3      15234882        rs17040855      G       A       .       PASS    AA=A;DP=118     GT:GQ:DP        1|1:99:33       1|0:100:29      1|1:100:56
+12     69443794        rs11178398      C       A       .       PASS    AA=C;DP=133     GT:GQ:DP        1|1:99:33       1|0:100:29      1|1:100:69
+3      69204331        rs2009602       A       G       .       PASS    AA=G;DP=159     GT:GQ:DP        1|1:99:33       1|0:100:40      1|1:100:89
+6      145649688       rs9373448       C       T       .       PASS    AA=C;DP=161     GT:GQ:DP        1|1:99:33       1|0:100:45      1|1:100:82
+6      132759924       rs7745230       A       G       .       PASS    AA=G;DP=111     GT:GQ:DP        1|1:99:33       1|0:62:17       1|1:67:49
+3      96669554        rs4131390       T       C       .       PASS    AA=C;DP=114     GT:GQ:DP        1|1:99:33       1|0:71:23       1|1:100:60
+19     33338838        rs2867883       G       T       .       PASS    AA=T;DP=131     GT:GQ:DP        1|1:99:33       1|0:83:21       1|1:100:75
+3      37156019        rs4678938       G       C       .       PASS    AA=C;DP=128     GT:GQ:DP        1|1:99:33       1|0:87:21       1|1:100:74
+1      94326026        rs560426        C       T       .       PASS    AA=T;DP=128;HM2;HM3     GT:GQ:DP        1|1:99:33       1|0:98:22       1|1:100:72
+11     74064380        rs7104675       G       A       .       PASS    AA=A;DP=129     GT:GQ:DP        1|1:99:34       0|1:100:23      1|0:100:73
+12     112448547       rs10774698      A       G       .       PASS    AA=G;DP=128     GT:GQ:DP        1|1:99:34       0|1:100:23      1|0:100:73
+8      2983557 rs10046671      C       T       .       PASS    AA=T;DP=135     GT:GQ:DP        1|1:99:34       0|1:100:23      1|0:100:77
+4      34523908        rs16990388      A       G       .       PASS    AA=G;DP=121     GT:GQ:DP        1|1:99:34       0|1:100:24      1|0:100:63
+20     37776223        rs292878        T       C       .       PASS    AA=C;DP=140     GT:GQ:DP        1|1:99:34       0|1:100:24      1|0:100:82
+4      124690460       rs4833928       A       G       .       PASS    AA=G;DP=144     GT:GQ:DP        1|1:99:34       0|1:100:24      1|0:100:87
+10     22606530        rs11012928      T       A       .       PASS    AA=T;DP=145     GT:GQ:DP        1|1:99:34       0|1:100:26      1|0:100:86
+19     35457610        rs4805537       T       C       .       PASS    AA=T;DP=134     GT:GQ:DP        1|1:99:34       0|1:100:27      1|0:100:77
+21     31502107        rs10483004      T       C       .       PASS    AA=C;DP=134     GT:GQ:DP        1|1:99:34       0|1:100:28      1|0:100:71
+9      133847918       rs7048083       A       G       .       PASS    AA=A;DP=141     GT:GQ:DP        1|1:99:34       0|1:100:32      1|0:100:74
+9      138921753       rs10119096      T       C       .       PASS    AA=T;DP=138     GT:GQ:DP        1|1:99:34       0|1:32:15       1|0:100:87
+8      6749758 rs2741071       T       C       .       PASS    AA=.;DP=124     GT:GQ:DP        1|1:99:34       0|1:58:25       1|0:100:66
+3      157999056       rs55748213      A       G       .       PASS    AA=G;DP=114     GT:GQ:DP        1|1:99:34       1|0:100:20      1|1:100:61
+6      33141335        .       C       G       .       PASS    AA=c;DP=112     GT:GQ:DP        1|1:99:34       1|0:100:21      1|1:100:44
+9      35132258        rs7046814       A       G       .       PASS    AA=a;DP=119     GT:GQ:DP        1|1:99:34       1|0:100:21      1|1:100:65
+7      8393412 rs6967204       A       G       .       PASS    AA=A;DP=164     GT:GQ:DP        1|1:99:34       1|0:100:24      1|1:100:99
+9      16952019        rs10511630      G       C       .       PASS    AA=C;DP=110     GT:GQ:DP        1|1:99:34       1|0:100:24      1|1:93:39
+2      47144041        rs2692219       G       A       .       PASS    AA=A;DP=138     GT:GQ:DP        1|1:99:34       1|0:100:25      1|1:100:80
+11     120996535       rs10750192      G       C       .       PASS    AA=G;DP=135     GT:GQ:DP        1|1:99:34       1|0:100:26      1|1:100:74
+1      24431242        rs4648948       A       T       .       PASS    AA=N;DP=147     GT:GQ:DP        1|1:99:34       1|0:100:30      1|1:100:85
+1      95712355        rs957186        G       A       .       PASS    AA=A;DP=113;HM2;HM3     GT:GQ:DP        1|1:99:34       1|0:51:18       1|1:100:61
+5      106284307       rs7706863       G       A       .       PASS    AA=G;DP=124     GT:GQ:DP        1|1:99:34       1|0:67:29       1|1:100:61
+7      101238115       rs2690906       G       A       .       PASS    AA=A;DP=102     GT:GQ:DP        1|1:99:34       1|0:89:14       1|1:100:54
+11     39252869        rs1391589       C       T       .       PASS    AA=T;DP=88      GT:GQ:DP        1|1:99:34       1|0:91:19       1|1:84:28
+4      190966682       rs4863027       C       T       .       PASS    AA=T;DP=128     GT:GQ:DP        1|1:99:34       1|0:92:26       1|1:100:68
+5      97851398        rs10463479      T       C       .       PASS    AA=T;DP=130     GT:GQ:DP        1|1:99:34       1|0:94:21       1|1:100:78
+16     85806559        rs4843571       A       G       .       PASS    AA=N;DP=116     GT:GQ:DP        1|1:99:34       1|1:17:22       1|1:100:58
+1      205057407       rs2176511       T       A       .       PASS    AA=A;DP=128;HM2;HM3     GT:GQ:DP        1|1:99:35       0|1:100:19      1|0:100:74
+7      105188251       rs498280        T       C       .       PASS    AA=C;DP=130     GT:GQ:DP        1|1:99:35       0|1:100:26      1|0:100:69
+13     20034237        rs4770055       C       T       .       PASS    AA=T;DP=130     GT:GQ:DP        1|1:99:35       0|1:100:27      1|0:100:68
+10     7047289 rs1361249       C       T       .       PASS    AA=C;DP=136     GT:GQ:DP        1|1:99:35       0|1:100:28      1|0:100:73
+9      115735026       rs10982007      G       A       .       PASS    AA=g;DP=157     GT:GQ:DP        1|1:99:35       0|1:100:28      1|0:100:95
+20     17955481        rs6034942       C       T       .       PASS    AA=T;DP=105     GT:GQ:DP        1|1:99:35       1|0:100:16      1|1:100:43
+20     42906378        .       C       T       .       PASS    AA=C;DP=116     GT:GQ:DP        1|1:99:35       1|0:100:19      1|1:100:61
+12     29302965        rs7316004       C       T       .       PASS    AA=C;DP=128     GT:GQ:DP        1|1:99:35       1|0:100:25      1|1:100:55
+16     78766944        rs2169806       G       A       .       PASS    AA=A;DP=129     GT:GQ:DP        1|1:99:35       1|0:100:28      1|1:100:66
+1      179470817       rs10797699      G       A       .       PASS    AA=A;DP=129;HM3 GT:GQ:DP        1|1:99:35       1|0:92:24       1|1:100:67
+12     6337707 rs10849445      C       A       .       PASS    AA=A;DP=138     GT:GQ:DP        1|1:99:35       1|1:86:27       1|1:100:77
+19     544018  rs12977194      A       G       .       PASS    AA=a;DP=139     GT:GQ:DP        1|1:99:36       0|1:21:16       1|0:100:90
+12     128282549       rs4759649       A       G       .       PASS    AA=G;DP=123     GT:GQ:DP        1|1:99:36       1|0:100:29      1|1:100:58
+10     27068155        rs3802610       C       G       .       PASS    AA=G;DP=157     GT:GQ:DP        1|1:99:36       1|0:64:22       1|1:100:101
+6      6856314 rs2768995       C       T       .       PASS    AA=T;DP=165     GT:GQ:DP        1|1:99:37       1|0:100:30      1|1:100:61
+3      180553148       rs6804758       C       T       .       PASS    AA=T;DP=135     GT:GQ:DP        1|1:99:39       1|1:59:19       1|1:100:79
+10     130492789       rs614538        A       T       .       PASS    AA=T;DP=139     GT:GQ:DP        1|1:99:39       1|1:59:20       1|1:100:79
+19     58970920        rs11084285      G       C       .       PASS    AA=C;DP=126     GT:GQ:DP        1|1:99:40       0|1:96:20       1|0:100:70
+7      138272991       rs2718133       A       G       .       PASS    AA=N;DP=156     GT:GQ:DP        1|1:99:41       0|1:100:21      1|0:100:94
+1      179446859       rs4651093       G       A       .       PASS    AA=A;DP=153;HM2;HM3     GT:GQ:DP        1|1:99:41       0|1:100:36      1|0:100:77
+1      23810800        rs7549016       T       C       .       PASS    AA=T;DP=137;HM2 GT:GQ:DP        1|1:99:41       1|1:80:27       1|1:100:69
+15     38117985        rs937215        C       T       .       PASS    AA=T;DP=123     GT:GQ:DP        1|1:99:43       1|1:68:22       1|1:100:56
+7      155525127       rs4716581       G       A       .       PASS    AA=A;DP=153     GT:GQ:DP        1|1:99:45       1|1:29:8        1|1:100:101
+4      17962722        rs2192526       A       T       .       PASS    AA=T;DP=78      GT:GQ:DP        1|1:9:12        0|0:55:30       1|0:100:37
+13     54893677        rs3105089       T       C       .       PASS    AA=.;DP=63      GT:GQ:DP        1|1:9:12        1|0:100:14      1|1:68:24
+17     69757548        rs1112216       G       A       .       PASS    AA=A;DP=57      GT:GQ:DP        1|1:9:14        0|1:38:8        1|0:100:30
+X      114476781       .       G       A       .       PASS    AA=G;DP=95      GT:GQ:DP        1|1:9:15        0|0:66:23       1|0:100:37
+8      143973171       rs4736352       T       G       .       PASS    AA=G;DP=61      GT:GQ:DP        1|1:9:19        1|0:32:7        1|1:56:35
+X      86934198        rs5922490       C       T       .       PASS    AA=C;DP=101     GT:GQ:DP        1|1:9:20        0|0:41:25       1|0:100:32
+10     83289605        rs12261054      A       G       .       PASS    AA=A;DP=85      GT:GQ:DP        1|1:9:24        0|1:74:23       1|0:100:26
+X      91917456        .       C       A       .       PASS    AA=A;DP=59      GT:GQ:DP        1|1:9:4 0|1:100:18      1|0:100:27
+X      57797859        rs5988998       C       T       .       PASS    AA=.;DP=85      GT:GQ:DP        1|1:9:8 0|1:62:19       1|0:100:23

diff --git a/modular/shell/exercises/genotype/README.md b/modular/shell/exercises/genotype/README.md
new file mode 100644 (file)
index 0000000..7ea3ef0
--- /dev/null
+++ b/modular/shell/exercises/genotype/README.md
@@ -0,0 +1,368 @@
+# Shell
+
+Let's try out your new shell skills on some real data.
+
+The file `1000gp.vcf` is a small sample (1%) of a very large text file
+containing human genetics data. Specifically, it describes genetic variation in
+three African individuals sequenced as part of the [1000 Genomes
+Project](http://www.1000genomes.org). 
+
+## Exercise Part 1 (setup)
+
+* If you had forgotten where you downloaded the file, how would you locate the
+path of all files with that name on the computer (using the shell)?  
+
+  **Hint:**
+  > `$ man find`
+
+  **Answer:**
+  > `$ find / -name "1000gp.vcf"`
+
+* It's usually a good idea to use an empty directory as a workspace so that
+  other files don't get in the way (or accidentally get overwritten or deleted).
+  Create a new subdirectory directory named "sandbox", move our data file there,
+  and make the directory your current working directory (sandbox should be the
+  last part of the path given when you type `pwd`. 
+
+
+  **Answer:**
+  > ```bash
+  > $ mkdir sandbox
+  > $ mv /home/orion/Downloads/1000gp.vcf sandbox
+  > $ cd sandbox
+  > ```
+
+
+## Exercise Part 2 (analysis)
+
+* The data file you downloaded is a line-based text file. The "vcf" extension
+  lets us know that it's in a specific text format, namely "Variant Call
+  Format". The file starts with a bunch of comment lines (they start with "#" or
+  "##"), and then a large number of data lines. The human genome can be thought
+  of as an encyclopedia, where each chromosome is a volume. Each volume is just
+  a long string of characters, but rather than the english alphabet, the genome
+  uses just the characters "A", "C", "G", and "T". This VCF file lists the
+  differences between the three African individuals and a standard "individual"
+  called the reference (actually based upon a few different people). Each line
+  in the file corresponds to a difference. The line tells us the position of the
+  difference (chromosome and position), the genetic sequence in the reference,
+  and the corresponding sequence in each of the three Africans. Research is
+  ongoing to understand the full effects of these genetic differences; some
+  cause diseases such as Tay-Sachs and Hemophilia, while others determine your
+  blood type and eye color.
+
+  Before we start processing the file, let's get a high-level view of the file
+  that we're about to work with.
+
+  What's the file size (in kilo-bytes), and how many lines are in the file?
+
+
+  **Hint:**
+  > There's an option to `ls` that will print the file sizes in a more
+  > human-friendly format.
+
+
+  **A hint about the number of lines:**
+  > `$ man wc`
+
+
+  **Answer:**
+  > We should get a file size around 3.6 MB with:
+  > `$ ls -lh 1000gp.vcf`
+  > Alternatively, the command `du` can be used to achieve a similar result:
+  > `$ du -h 1000gp.vcf`
+  > 
+  > We find there are 45034 lines with:
+  > `$ wc -l 1000gp.vcf`
+
+
+* Because this file is so large, you're going to almost always want to pipe
+("|") the result of any command to `less` (a simple text viewer, type 'q' to
+exit) or `head` (to print the first 10 lines) so that you don't accidentally
+print 45,000 lines to the screen.
+
+  Let's start by printing the first 5 lines to see what it looks like.  
+
+  **Answer:**
+  > `$ head -5 1000gp.vcf`
+
+* That isn't very interesting; it's just a bunch of the comments at the
+beginning of the file (they all start with "#")! Print the first 20 lines to see
+more of the file.
+
+  **Answer:**
+  > `$ head -20 1000gp.vcf`
+
+
+* Okay, so now we can see the basic structure of the file. A few comment lines
+  that start with "#" or "##" and then a bunch of lines of data that contain all
+  the data and are pretty hard to understand. Each line of data contains the
+  same number of fields, and all fields are separated with TABs. These fields
+  are:
+
+  1. the chromosome (which volume the difference is in)
+  2. the position (which character in the volume the difference starts at)
+  3. the ID of the difference
+  4. the sequence in the reference human(s)
+
+  The rest of the columns tell us, in a rather complex way, a bunch of
+  additional information about that position, including: the predicted sequence
+  for each of the three Africans and how confident the scientists are that these
+  sequences are correct.
+
+  To start analyzing the actual data, we have to remove the header. How can we
+  print the first 10 non-header lines (those that _don't_ start with a "#")?
+
+  **Hint:**
+    $ man grep
+
+  **Hint:**
+  > You can use a pipe ("|") to connect the output of `grep` to the input of
+  > `head`.
+
+  **Hint:**
+  In `grep` regular expressions, the carat '^' character matches the start of a
+  line and the dollar sign '$' matches the end of a line. Thus, the following
+  will print all non-blank lines from `file`:
+    $ grep -v "^$" file
+
+  **Our answer:**
+  >     $ grep -v "^#" 1000gp.vcf | head
+  > 
+  > Why are neither of these correct?
+  >     $ grep -v "#" 1000gp.vcf | head
+  >     $ grep -v "^##" 1000gp.vcf | head
+
+* How many lines of data are in the file (rather than counting the number of
+  header lines and subtracting, try just counting the number of data lines)?
+
+  **Hint:**
+  > Instead of piping to `head`, try piping to `wc`.
+
+  **Our Answer:**
+  >     $ grep -v "^#" 1000gp.vcf | wc -l
+  >
+  > should print `45024`
+
+* Where these differences are located can be important. If all the differences
+  between two encyclopedias were in just the first volume, that would be
+  interesting. The first field of each data line is the name of the chromosome
+  that the difference occurs on (which volume we're on). Print the first 10
+  chromosomes, one per line.
+
+  **Hint:**
+  > You can extract a column from a tab-delimited text file using the `cut`
+  > command.
+
+  **Hint:**
+  > Use `grep` to print only non-comment lines, and `cut` to extract the
+  > chromosome column.
+
+  **Our Answer:**
+  >     $ grep -v "^#" 1000gp.vcf | cut -f 1 | head
+
+* As you should have observed, the first 10 lines are on numbered chromosomes.
+  Every normal cell in your body has 23 pairs of chromosomes, 22 pairs of
+  "autosomal" chromosomes (these are numbered 1-22) and a pair of sex
+  chromosomes (two Xs if you're female, an X and a Y if you're male). If you've
+  heard of the genetics company [23andMe](https://www.23andme.com), the 23
+  refers to these 23 pairs of chromosomes. 
+
+  Let's look at which chromosomes these variations are on. Print a list of the
+  chromosomes that are in the file (each chromosome name should only be printed
+  once, so you should only print 23 lines).
+
+  **Hint:**
+  > You need to remove all the duplicate lines from your previous answer.
+
+  **Hint:**
+  > `sort` has an option that should make this easier.
+
+  **Our Answer:**
+  >     $ grep -v "^#" 1000gp.vcf | cut -f 1 | sort -u
+
+
+* Rather than using `sort` to print unique results, a common pipeline is to
+  first sort and then pipe to another UNIX command, `uniq`. The `uniq` command
+  takes _sorted_ input and prints only unique lines, but it provides more
+  flexibility than just using `sort` by itself. Keep in mind, if the input isn't
+  sorted, `uniq` won't work properly.
+
+  Using `sort` and `uniq`, print the number of times each chromosome occurs in
+  the file.
+
+  **Hint:**
+  >     $ man uniq
+
+  **Hint:**
+  > Instead of using `sort` to remove duplicates, just use it to sort and pipe
+  > the result to `uniq`.
+
+  **Our Answer:**
+  >     $ grep -v "^#" 1000gp.vcf | cut -f 1 | sort | uniq -c
+
+
+* Add to your previous solution to list the chromosomes from most frequently
+  observed to least frequently observed.
+
+  **Hint:**
+  >     $ man sort
+
+  **Hint:**
+  > Make sure you're sorting in descending order. By default, `sort` sorts in
+  > ascending order.
+
+  **Our Answer:**
+  >     $ grep -v "^#" 1000gp.vcf | cut -f 1 | sort | uniq -c | sort -n -r
+  >
+  > should output the following:
+  >
+  >     3721 2
+  >     3387 1
+  >     3224 4
+  >     3219 3
+  >     2894 5
+  >     2860 6
+  >     2527 8
+  >     2525 7
+  >     2203 10
+  >     2166 11
+  >     2032 12
+  >     1865 9
+  >     1656 13
+  >     1409 14
+  >     1362 16
+  >     1304 X
+  >     1275 18
+  >     1265 15
+  >     1097 17
+  >      993 20
+  >      814 19
+  >      661 21
+  >      565 22
+    
+* The autosomal chromosomes (1-22) are named according to their size. The
+  largest of them is chromosome 1, while the smallest is chromosome 22. Does it
+  look like differences occur relatively randomly across the genome, or are some
+  chromosomes more different than you'd expect at random (very roughly taking
+  their sizes into account)?
+
+  It's worth noting that the chromosomes were numbered by the sizes of the
+  actual molecules, not how much of them had been sequenced.
+
+  Wikipedia has a nice table of chromosome sizes and how much of each has been
+  sequenced (and you can sort it):
+  http://en.wikipedia.org/wiki/Human_chromosome#Human_chromosomes
+
+  Notice anything?
+
+  **Our Hypothesis:**
+  > Since variation can only be found in the known sequence, the order you
+  > printed corresponds closely to ordering by the number of bases sequenced
+  > (rather than the total number of bases). 
+  > 
+  > Given this, it seems like differences occur relatively randomly across the
+  > genome. We see more differences on longer chromosomes, fewer on shorter,
+  > without any striking outliers.
+
+* This is great, but biologists might also like to see the chromosomes ordered
+  by their number (not dictionary order), since different chromosomes have
+  different attributes and this ordering allows them to find a specific
+  chromosome more easily.
+
+  **Hint:**
+  > A lot of the power of `sort` comes from the fact that you can specify which
+  > fields to sort on, and the order in which to sort them. In this case you
+  > only need to sort on one field.
+
+  **Answer:**
+  >     $ grep -v "^#" 1000gp.vcf | cut -f 1 | sort | uniq -c | sort -k 2n
+
+
+## Exercise Part 3 (scripts and svn)
+* Wonderful! Now we have a (long) command for printing chromosome statistics
+  from our `1000gp.vcf` file. Using `nano`, create a new file, "chrom_stats.sh",
+  with just your answer to the previous question in it.
+
+  **Answer:**
+  >  Type the following to open a new file:
+  >     $ nano chrom_stats.sh
+  >  Type in the command. Type ^o to save and ^x (where ^ means the control key).
+
+* Just to be illustrate the flexibility of the shell, try creating the same file
+  directly from the shell (without a text editor). Once you do, you can use
+  `cat` to make sure the contents of the file are exactly what you expect.
+
+  **Hint:**
+  > You can use `echo` to print something and `>` to redirect to a file.
+
+  **Hint:**
+  > Since our long command has double-quotes in it, you either need to use
+  > single-quotes or escape these with back-slashes.
+
+  **Answer:**
+    $ echo 'grep -v "^#" 1000gp.vcf | cut -f 1 | sort | uniq -c | sort -k 2n' > chrom_stats.sh
+    $ cat chrom_stats.sh
+
+* Now, execute your new script to print the chromosome statistics.
+
+  **Hint:**
+  > You may have to change the permissions to allow you to execute it.
+
+  **Hint:**
+  > It's good form to only make permissions as permissive as necessary. So,
+  > rather than allow everyone to execute the file, it is better to just allow
+  > you to execute it.
+
+  **Answer:**
+    $ chmod u+x chrom_stats.sh
+    $ ./chrom_stats.sh
+
+  > Note that it is `u+x` instead of just `+x` or `a+x`. This only adds the
+  > ability for the owner to execute it, whereas the other two options would
+  > allow anyone to execute it.
+
+* We'd like to be able to use this script in the future with arbitrary VCF
+  files, instead of just our `1000gp.vcf` file. Edit the script so that it takes
+  VCF-formatted text input on stdin and prints out chromosome statistics on
+  stdout. This is simpler than you might think.
+
+  **Hint:**
+  > If `grep` isn't given an input file, it will read from stdin.
+
+  **Answer:**
+  > Change
+  > `grep -v "^#" 1000gp.vcf | ...`
+  > to
+  > `grep -v "^#" | ...`
+  > 
+  > Since this is in a file instead of the shell prompt, we aren't showing the
+  > "$" at the beginning of the line.
+
+* Now that we have a script that reads from stdin and prints to stdout, how do
+  we run it on the `1000gp.vcf` file to get the same output as before?
+
+  **Hint:**
+  > The `cat` command is used to print files to stdout.
+
+  **Hint:**
+  > You can pipe the output of `cat` directly into our script.
+
+  **Hint:**
+  > Just like before, in order to tell the shell that the `chrom_stats.sh` file
+  > we want to execute is the one in our current directory, we need to use
+  > `./chrom_stats.sh`.
+
+  **Answer:**
+  `$ cat 1000gp.vcf | ./chrom_stats.sh`
+
+* Finally, add a copy of this file to your folder in the class SVN repository.
+  1. `cp chrom_stats.sh /path/to/repo/participants/user/`
+  2. Add the file to subversion version control
+  3. Commit your changes
+
+**Fin.** 
+Comments, questions, and suggestions are encouraged and appreciated.
+Thanks to Tommy Guy, Jon Pipitone, Greg Wilson, and Elango Cheran for their help
+with these exercises.
+

diff --git a/modular/shell/exercises/hearing/README.md b/modular/shell/exercises/hearing/README.md
new file mode 100644 (file)
index 0000000..61d5fda
--- /dev/null
+++ b/modular/shell/exercises/hearing/README.md
@@ -0,0 +1,36 @@
+# Cochlear Implants
+
+A cochlear implant is a small electronic device that is surgically
+implanted in the inner ear to give deaf people a sense of
+hearing. More than a quarter of a million people have them, but there
+is still no widely-accepted benchmark to measure their effectiveness.
+In order to establish a baseline for such a benchmark, our supervisor
+got teenagers with CIs to listen to audio files on their computer and
+report:
+
+1.  the quietest sound they could hear
+2.  the lowest and highest tones they could hear
+3.  the narrowest range of frequencies they could discriminate
+
+To participate, subjects attended our laboratory and one of our lab
+techs played an audio sample, and recorded their data—when they first
+heard the sound, or first heard a difference in the sound.  Each set
+of test results were written out to a text file, one set per file.
+Each participant has a unique subject ID, and a made-up subject name.
+Each experiment has a unique experiment ID. The experiment has
+collected 351 files so far.
+
+The data is a bit of a mess! There are inconsistent file names, there
+are extraneous `NOTES` files that we'd like to get rid of, and the
+data is spread across many directories. We are going to use shell
+commands to get this data into shape. By the end we would like to:
+
+1.  Put all of the data into one directory called `alldata`
+
+2.  Have all of the data files in there, and ensure that every file
+    has a `.txt` extension
+
+3.  Get rid of the extraneous `NOTES` files
+
+If we can get through this example in the available time, we will move
+on to more advanced shell topics…

diff --git a/modular/shell/exercises/hearing/data/Bert/audioresult-00215 b/modular/shell/exercises/hearing/data/Bert/audioresult-00215
new file mode 100644 (file)
index 0000000..26f0304
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Bert/audioresult-00215
@@ -0,0 +1,9 @@
+# 
+Reported: Sun Jun 26 14:56:54 2011
+Subject: beyonceLennon177
+Year/month of birth: 1993/09
+Sex: N
+CI type: 20
+Volume: 8
+Range: 5
+Discrimination: 7

diff --git a/modular/shell/exercises/hearing/data/Bert/audioresult-00222 b/modular/shell/exercises/hearing/data/Bert/audioresult-00222
new file mode 100644 (file)
index 0000000..1cfe02d
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Bert/audioresult-00222
@@ -0,0 +1,9 @@
+# 
+Reported: Wed Jul 6 12:48:14 2011
+Subject: madonnaBroccoli184
+Year/month of birth: 1999/02
+Sex: N
+CI type: 22
+Volume: 6
+Range: 5
+Discrimination: 5

diff --git a/modular/shell/exercises/hearing/data/Bert/audioresult-00223 b/modular/shell/exercises/hearing/data/Bert/audioresult-00223
new file mode 100644 (file)
index 0000000..f2c016c
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Bert/audioresult-00223
@@ -0,0 +1,9 @@
+# 
+Reported: Sun May 29 13:27:38 2011
+Subject: georgeBeatle185
+Year/month of birth: 1993/01
+Sex: M
+CI type: 11
+Volume: 3
+Range: 2
+Discrimination: 5

diff --git a/modular/shell/exercises/hearing/data/Bert/audioresult-00235 b/modular/shell/exercises/hearing/data/Bert/audioresult-00235
new file mode 100644 (file)
index 0000000..cc06dcd
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Bert/audioresult-00235
@@ -0,0 +1,9 @@
+# 
+Reported: Thu Aug 25 11:33:44 2011
+Subject: robynBroccoli193
+Year/month of birth: 1995/06
+Sex: N
+CI type: 15
+Volume: 7
+Range: 10
+Discrimination: 6

diff --git a/modular/shell/exercises/hearing/data/Bert/audioresult-00239 b/modular/shell/exercises/hearing/data/Bert/audioresult-00239
new file mode 100644 (file)
index 0000000..cd8a707
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Bert/audioresult-00239
@@ -0,0 +1,9 @@
+# 
+Reported: Sun May 1 11:05:49 2011
+Subject: robynSync197
+Year/month of birth: 1991/01
+Sex: N
+CI type: 19
+Volume: 4
+Range: 7
+Discrimination: 3

diff --git a/modular/shell/exercises/hearing/data/Bert/audioresult-00246 b/modular/shell/exercises/hearing/data/Bert/audioresult-00246
new file mode 100644 (file)
index 0000000..2592a16
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Bert/audioresult-00246
@@ -0,0 +1,9 @@
+# 
+Reported: Fri Aug 19 10:22:59 2011
+Subject: paulBackstreet202
+Year/month of birth: 1998/08
+Sex: N
+CI type: 12
+Volume: 3
+Range: 8
+Discrimination: 4

diff --git a/modular/shell/exercises/hearing/data/Bert/audioresult-00265 b/modular/shell/exercises/hearing/data/Bert/audioresult-00265
new file mode 100644 (file)
index 0000000..28ed7a5
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Bert/audioresult-00265
@@ -0,0 +1,9 @@
+# 
+Reported: Sat Sep 3 14:56:05 2011
+Subject: georgeHarrison216
+Year/month of birth: 1999/11
+Sex: F
+CI type: 1
+Volume: 6
+Range: 7
+Discrimination: 2

diff --git a/modular/shell/exercises/hearing/data/Bert/audioresult-00267 b/modular/shell/exercises/hearing/data/Bert/audioresult-00267
new file mode 100644 (file)
index 0000000..b19664d
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Bert/audioresult-00267
@@ -0,0 +1,9 @@
+# 
+Reported: Sat Jul 30 10:25:29 2011
+Subject: babyBeatle218
+Year/month of birth: 1997/06
+Sex: M
+CI type: 24
+Volume: 5
+Range: 9
+Discrimination: 7

diff --git a/modular/shell/exercises/hearing/data/Bert/audioresult-00270 b/modular/shell/exercises/hearing/data/Bert/audioresult-00270
new file mode 100644 (file)
index 0000000..36301e7
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Bert/audioresult-00270
@@ -0,0 +1,9 @@
+# 
+Reported: Fri May 27 15:57:41 2011
+Subject: gingerLennon221
+Year/month of birth: 1992/04
+Sex: N
+CI type: 9
+Volume: 5
+Range: 4
+Discrimination: 7

diff --git a/modular/shell/exercises/hearing/data/Bert/audioresult-00286 b/modular/shell/exercises/hearing/data/Bert/audioresult-00286
new file mode 100644 (file)
index 0000000..90b7e58
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Bert/audioresult-00286
@@ -0,0 +1,9 @@
+# 
+Reported: Tue Aug 30 12:16:14 2011
+Subject: gingerMcCartney236
+Year/month of birth: 1993/10
+Sex: F
+CI type: 10
+Volume: 3
+Range: 10
+Discrimination: 5

diff --git a/modular/shell/exercises/hearing/data/Bert/audioresult-00304 b/modular/shell/exercises/hearing/data/Bert/audioresult-00304
new file mode 100644 (file)
index 0000000..2fd3c4c
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Bert/audioresult-00304
@@ -0,0 +1,9 @@
+# 
+Reported: Tue May 17 09:31:06 2011
+Subject: scaryBroccoli244
+Year/month of birth: 1997/12
+Sex: F
+CI type: 1
+Volume: 3
+Range: 5
+Discrimination: 5

diff --git a/modular/shell/exercises/hearing/data/Bert/audioresult-00317 b/modular/shell/exercises/hearing/data/Bert/audioresult-00317
new file mode 100644 (file)
index 0000000..19cc8ec
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Bert/audioresult-00317
@@ -0,0 +1,9 @@
+# 
+Reported: Sat Sep 24 15:58:59 2011
+Subject: gingerSpice253
+Year/month of birth: 1996/10
+Sex: F
+CI type: 20
+Volume: 8
+Range: 6
+Discrimination: 5

diff --git a/modular/shell/exercises/hearing/data/Bert/audioresult-00319 b/modular/shell/exercises/hearing/data/Bert/audioresult-00319
new file mode 100644 (file)
index 0000000..f0679ba
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Bert/audioresult-00319
@@ -0,0 +1,9 @@
+# 
+Reported: Tue Sep 6 14:27:03 2011
+Subject: beyonceBroccoli254
+Year/month of birth: 1999/11
+Sex: M
+CI type: 1
+Volume: 5
+Range: 10
+Discrimination: 5

diff --git a/modular/shell/exercises/hearing/data/Bert/audioresult-00320 b/modular/shell/exercises/hearing/data/Bert/audioresult-00320
new file mode 100644 (file)
index 0000000..a40c8f1
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Bert/audioresult-00320
@@ -0,0 +1,9 @@
+# 
+Reported: Wed Jun 22 12:34:15 2011
+Subject: paulBackstreet255
+Year/month of birth: 1994/07
+Sex: N
+CI type: 23
+Volume: 5
+Range: 7
+Discrimination: 4

diff --git a/modular/shell/exercises/hearing/data/Bert/audioresult-00321 b/modular/shell/exercises/hearing/data/Bert/audioresult-00321
new file mode 100644 (file)
index 0000000..7ae1e75
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Bert/audioresult-00321
@@ -0,0 +1,9 @@
+# 
+Reported: Mon Jun 20 13:36:14 2011
+Subject: gingerCarrot256
+Year/month of birth: 1992/01
+Sex: N
+CI type: 13
+Volume: 1
+Range: 5
+Discrimination: 3

diff --git a/modular/shell/exercises/hearing/data/Bert/audioresult-00330 b/modular/shell/exercises/hearing/data/Bert/audioresult-00330
new file mode 100644 (file)
index 0000000..04409a2
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Bert/audioresult-00330
@@ -0,0 +1,9 @@
+# 
+Reported: Wed Sep 21 14:11:14 2011
+Subject: scaryBeatle265
+Year/month of birth: 1993/04
+Sex: F
+CI type: 6
+Volume: 4
+Range: 4
+Discrimination: 3

diff --git a/modular/shell/exercises/hearing/data/Bert/audioresult-00332 b/modular/shell/exercises/hearing/data/Bert/audioresult-00332
new file mode 100644 (file)
index 0000000..34b676f
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Bert/audioresult-00332
@@ -0,0 +1,9 @@
+# 
+Reported: Sat Jul 30 08:38:30 2011
+Subject: georgeJonas266
+Year/month of birth: 1993/12
+Sex: M
+CI type: 21
+Volume: 8
+Range: 5
+Discrimination: 5

diff --git a/modular/shell/exercises/hearing/data/Bert/audioresult-00350 b/modular/shell/exercises/hearing/data/Bert/audioresult-00350
new file mode 100644 (file)
index 0000000..2664e7a
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Bert/audioresult-00350
@@ -0,0 +1,9 @@
+# 
+Reported: Fri Jun 17 14:36:59 2011
+Subject: scarySpice280
+Year/month of birth: 1999/12
+Sex: F
+CI type: 18
+Volume: 6
+Range: 4
+Discrimination: 5

diff --git a/modular/shell/exercises/hearing/data/Bert/audioresult-00353 b/modular/shell/exercises/hearing/data/Bert/audioresult-00353
new file mode 100644 (file)
index 0000000..3915f44
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Bert/audioresult-00353
@@ -0,0 +1,9 @@
+# 
+Reported: Tue Jun 28 12:34:35 2011
+Subject: madonnaMcCartney282
+Year/month of birth: 1997/07
+Sex: N
+CI type: 20
+Volume: 6
+Range: 6
+Discrimination: 4

diff --git a/modular/shell/exercises/hearing/data/Bert/audioresult-00355 b/modular/shell/exercises/hearing/data/Bert/audioresult-00355
new file mode 100644 (file)
index 0000000..1c7224e
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Bert/audioresult-00355
@@ -0,0 +1,9 @@
+# 
+Reported: Sun Jun 12 16:25:26 2011
+Subject: poshBeatle284
+Year/month of birth: 1997/08
+Sex: F
+CI type: 14
+Volume: 6
+Range: 7
+Discrimination: 4

diff --git a/modular/shell/exercises/hearing/data/Bert/audioresult-00359 b/modular/shell/exercises/hearing/data/Bert/audioresult-00359
new file mode 100644 (file)
index 0000000..710a2e9
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Bert/audioresult-00359
@@ -0,0 +1,9 @@
+# 
+Reported: Sun May 8 11:04:18 2011
+Subject: scarySpice288
+Year/month of birth: 1993/04
+Sex: M
+CI type: 8
+Volume: 5
+Range: 7
+Discrimination: 4

diff --git a/modular/shell/exercises/hearing/data/Bert/audioresult-00372 b/modular/shell/exercises/hearing/data/Bert/audioresult-00372
new file mode 100644 (file)
index 0000000..2713442
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Bert/audioresult-00372
@@ -0,0 +1,9 @@
+# 
+Reported: Sat Sep 10 14:30:22 2011
+Subject: beyonceJonas301
+Year/month of birth: 1995/03
+Sex: N
+CI type: 19
+Volume: 1
+Range: 5
+Discrimination: 7

diff --git a/modular/shell/exercises/hearing/data/Bert/audioresult-00377 b/modular/shell/exercises/hearing/data/Bert/audioresult-00377
new file mode 100644 (file)
index 0000000..69a1161
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Bert/audioresult-00377
@@ -0,0 +1,9 @@
+# 
+Reported: Tue Jun 21 10:41:16 2011
+Subject: beyonceJonas304
+Year/month of birth: 1995/11
+Sex: F
+CI type: 16
+Volume: 5
+Range: 5
+Discrimination: 6

diff --git a/modular/shell/exercises/hearing/data/Bert/audioresult-00380 b/modular/shell/exercises/hearing/data/Bert/audioresult-00380
new file mode 100644 (file)
index 0000000..a794c0a
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Bert/audioresult-00380
@@ -0,0 +1,9 @@
+# 
+Reported: Mon May 9 08:17:18 2011
+Subject: scaryJonas306
+Year/month of birth: 1996/07
+Sex: N
+CI type: 4
+Volume: 4
+Range: 9
+Discrimination: 7

diff --git a/modular/shell/exercises/hearing/data/Bert/audioresult-00384 b/modular/shell/exercises/hearing/data/Bert/audioresult-00384
new file mode 100644 (file)
index 0000000..7d9ac01
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Bert/audioresult-00384
@@ -0,0 +1,9 @@
+# 
+Reported: Thu Sep 22 12:15:33 2011
+Subject: poshJonas308
+Year/month of birth: 1999/12
+Sex: N
+CI type: 13
+Volume: 8
+Range: 10
+Discrimination: 5

diff --git a/modular/shell/exercises/hearing/data/Bert/audioresult-00386 b/modular/shell/exercises/hearing/data/Bert/audioresult-00386
new file mode 100644 (file)
index 0000000..b4421d1
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Bert/audioresult-00386
@@ -0,0 +1,9 @@
+# 
+Reported: Fri Sep 23 09:15:36 2011
+Subject: paulAsparagus310
+Year/month of birth: 1991/09
+Sex: M
+CI type: 3
+Volume: 4
+Range: 4
+Discrimination: 

diff --git a/modular/shell/exercises/hearing/data/Bert/audioresult-00393 b/modular/shell/exercises/hearing/data/Bert/audioresult-00393
new file mode 100644 (file)
index 0000000..30902d3
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Bert/audioresult-00393
@@ -0,0 +1,9 @@
+# 
+Reported: Sun Jun 26 11:55:12 2011
+Subject: babyBeet317
+Year/month of birth: 1993/11
+Sex: F
+CI type: 1
+Volume: 6
+Range: 4
+Discrimination: 3

diff --git a/modular/shell/exercises/hearing/data/Bert/audioresult-00412 b/modular/shell/exercises/hearing/data/Bert/audioresult-00412
new file mode 100644 (file)
index 0000000..edd8f9f
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Bert/audioresult-00412
@@ -0,0 +1,9 @@
+# 
+Reported: Wed Sep 28 08:36:56 2011
+Subject: poshHarrison332
+Year/month of birth: 1994/04
+Sex: M
+CI type: 18
+Volume: 6
+Range: 6
+Discrimination: 9

diff --git a/modular/shell/exercises/hearing/data/Bert/audioresult-00416 b/modular/shell/exercises/hearing/data/Bert/audioresult-00416
new file mode 100644 (file)
index 0000000..fa4f8f8
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Bert/audioresult-00416
@@ -0,0 +1,9 @@
+# 
+Reported: Sat Aug 6 09:15:12 2011
+Subject: princeAsparagus333
+Year/month of birth: 1996/10
+Sex: M
+CI type: 17
+Volume: 6
+Range: 7
+Discrimination: 

diff --git a/modular/shell/exercises/hearing/data/Bert/audioresult-00422 b/modular/shell/exercises/hearing/data/Bert/audioresult-00422
new file mode 100644 (file)
index 0000000..9b0424a
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Bert/audioresult-00422
@@ -0,0 +1,9 @@
+# 
+Reported: Thu Sep 8 12:58:11 2011
+Subject: beyonceStarr338
+Year/month of birth: 1992/09
+Sex: N
+CI type: 23
+Volume: 8
+Range: 5
+Discrimination: 6

diff --git a/modular/shell/exercises/hearing/data/Bert/audioresult-00443 b/modular/shell/exercises/hearing/data/Bert/audioresult-00443
new file mode 100644 (file)
index 0000000..5b53ce9
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Bert/audioresult-00443
@@ -0,0 +1,9 @@
+# 
+Reported: Thu Jun 23 08:55:58 2011
+Subject: babyJonas352
+Year/month of birth: 1995/04
+Sex: N
+CI type: 17
+Volume: 4
+Range: 5
+Discrimination: 7

diff --git a/modular/shell/exercises/hearing/data/Bert/audioresult-00445 b/modular/shell/exercises/hearing/data/Bert/audioresult-00445
new file mode 100644 (file)
index 0000000..5305488
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Bert/audioresult-00445
@@ -0,0 +1,9 @@
+# 
+Reported: Fri Sep 9 10:49:33 2011
+Subject: scaryCarrot354
+Year/month of birth: 1993/09
+Sex: N
+CI type: 11
+Volume: 6
+Range: 4
+Discrimination: 

diff --git a/modular/shell/exercises/hearing/data/Bert/audioresult-00451 b/modular/shell/exercises/hearing/data/Bert/audioresult-00451
new file mode 100644 (file)
index 0000000..3e3eae7
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Bert/audioresult-00451
@@ -0,0 +1,9 @@
+# 
+Reported: Sun Aug 7 14:19:30 2011
+Subject: beyonceJonas360
+Year/month of birth: 1991/02
+Sex: F
+CI type: 12
+Volume: 7
+Range: 6
+Discrimination: 4

diff --git a/modular/shell/exercises/hearing/data/Bert/audioresult-00453 b/modular/shell/exercises/hearing/data/Bert/audioresult-00453
new file mode 100644 (file)
index 0000000..7c547e2
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Bert/audioresult-00453
@@ -0,0 +1,9 @@
+# 
+Reported: Sun Jul 17 15:56:04 2011
+Subject: georgeSync362
+Year/month of birth: 1996/09
+Sex: M
+CI type: 6
+Volume: 3
+Range: 6
+Discrimination: 

diff --git a/modular/shell/exercises/hearing/data/Bert/audioresult-00460 b/modular/shell/exercises/hearing/data/Bert/audioresult-00460
new file mode 100644 (file)
index 0000000..3bdf71e
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Bert/audioresult-00460
@@ -0,0 +1,9 @@
+# 
+Reported: Mon May 30 11:36:48 2011
+Subject: paulBroccoli369
+Year/month of birth: 1992/01
+Sex: F
+CI type: 14
+Volume: 6
+Range: 5
+Discrimination: 7

diff --git a/modular/shell/exercises/hearing/data/Bert/audioresult-00466 b/modular/shell/exercises/hearing/data/Bert/audioresult-00466
new file mode 100644 (file)
index 0000000..c57b598
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Bert/audioresult-00466
@@ -0,0 +1,9 @@
+# 
+Reported: Fri Jul 15 14:04:15 2011
+Subject: johnBeet374
+Year/month of birth: 1993/12
+Sex: M
+CI type: 23
+Volume: 1
+Range: 5
+Discrimination: 3

diff --git a/modular/shell/exercises/hearing/data/Bert/audioresult-00470 b/modular/shell/exercises/hearing/data/Bert/audioresult-00470
new file mode 100644 (file)
index 0000000..e62aae7
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Bert/audioresult-00470
@@ -0,0 +1,9 @@
+# 
+Reported: Sun Sep 11 16:04:30 2011
+Subject: poshMcCartney378
+Year/month of birth: 1992/10
+Sex: M
+CI type: 23
+Volume: 6
+Range: 8
+Discrimination: 9

diff --git a/modular/shell/exercises/hearing/data/Bert/audioresult-00472 b/modular/shell/exercises/hearing/data/Bert/audioresult-00472
new file mode 100644 (file)
index 0000000..a94d76e
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Bert/audioresult-00472
@@ -0,0 +1,9 @@
+# 
+Reported: Thu Jul 14 14:33:57 2011
+Subject: paulJonas380
+Year/month of birth: 1998/10
+Sex: F
+CI type: 20
+Volume: 6
+Range: 7
+Discrimination: 5

diff --git a/modular/shell/exercises/hearing/data/Bert/audioresult-00490 b/modular/shell/exercises/hearing/data/Bert/audioresult-00490
new file mode 100644 (file)
index 0000000..dd03f48
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Bert/audioresult-00490
@@ -0,0 +1,9 @@
+# 
+Reported: Wed Jul 27 11:08:42 2011
+Subject: gingerMcCartney390
+Year/month of birth: 1997/07
+Sex: M
+CI type: 8
+Volume: 5
+Range: 4
+Discrimination: 2

diff --git a/modular/shell/exercises/hearing/data/Bert/audioresult-00493 b/modular/shell/exercises/hearing/data/Bert/audioresult-00493
new file mode 100644 (file)
index 0000000..51138e8
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Bert/audioresult-00493
@@ -0,0 +1,9 @@
+# 
+Reported: Sat Aug 13 08:41:11 2011
+Subject: scaryZ393
+Year/month of birth: 1996/05
+Sex: M
+CI type: 14
+Volume: 5
+Range: 9
+Discrimination: 5

diff --git a/modular/shell/exercises/hearing/data/Bert/audioresult-00497 b/modular/shell/exercises/hearing/data/Bert/audioresult-00497
new file mode 100644 (file)
index 0000000..64e2a26
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Bert/audioresult-00497
@@ -0,0 +1,9 @@
+# 
+Reported: Mon May 2 15:22:40 2011
+Subject: jayBroccoli397
+Year/month of birth: 1991/05
+Sex: M
+CI type: 2
+Volume: 6
+Range: 6
+Discrimination: 1

diff --git a/modular/shell/exercises/hearing/data/Bert/audioresult-00518 b/modular/shell/exercises/hearing/data/Bert/audioresult-00518
new file mode 100644 (file)
index 0000000..720e9df
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Bert/audioresult-00518
@@ -0,0 +1,9 @@
+# 
+Reported: Tue Jun 28 09:42:30 2011
+Subject: jayCarrot410
+Year/month of birth: 1997/11
+Sex: F
+CI type: 15
+Volume: 3
+Range: 1
+Discrimination: 5

diff --git a/modular/shell/exercises/hearing/data/Bert/audioresult-00521 b/modular/shell/exercises/hearing/data/Bert/audioresult-00521
new file mode 100644 (file)
index 0000000..7928f75
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Bert/audioresult-00521
@@ -0,0 +1,9 @@
+# 
+Reported: Fri Sep 9 16:02:27 2011
+Subject: madonnaJonas411
+Year/month of birth: 1998/06
+Sex: N
+CI type: 23
+Volume: 8
+Range: 9
+Discrimination: 7

diff --git a/modular/shell/exercises/hearing/data/Bert/audioresult-00532 b/modular/shell/exercises/hearing/data/Bert/audioresult-00532
new file mode 100644 (file)
index 0000000..805d0c0
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Bert/audioresult-00532
@@ -0,0 +1,9 @@
+# 
+Reported: Wed Jul 6 16:29:27 2011
+Subject: babyHarrison418
+Year/month of birth: 1994/09
+Sex: M
+CI type: 3
+Volume: 4
+Range: 6
+Discrimination: 3

diff --git a/modular/shell/exercises/hearing/data/Bert/audioresult-00534 b/modular/shell/exercises/hearing/data/Bert/audioresult-00534
new file mode 100644 (file)
index 0000000..cb5d2f9
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Bert/audioresult-00534
@@ -0,0 +1,9 @@
+# 
+Reported: Tue Aug 16 08:52:53 2011
+Subject: babyHarrison418
+Year/month of birth: 1994/09
+Sex: M
+CI type: 3
+Volume: 3
+Range: 6
+Discrimination: 2

diff --git a/modular/shell/exercises/hearing/data/Bert/audioresult-00535 b/modular/shell/exercises/hearing/data/Bert/audioresult-00535
new file mode 100644 (file)
index 0000000..12bccbf
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Bert/audioresult-00535
@@ -0,0 +1,9 @@
+# 
+Reported: Fri Aug 19 09:36:48 2011
+Subject: beyonceHarrison419
+Year/month of birth: 1994/08
+Sex: F
+CI type: 25
+Volume: 4
+Range: 8
+Discrimination: 6

diff --git a/modular/shell/exercises/hearing/data/Bert/audioresult-00557 b/modular/shell/exercises/hearing/data/Bert/audioresult-00557
new file mode 100644 (file)
index 0000000..4ab7eba
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Bert/audioresult-00557
@@ -0,0 +1,9 @@
+# 
+Reported: Tue Jul 26 14:01:03 2011
+Subject: princeCarrot434
+Year/month of birth: 1992/09
+Sex: M
+CI type: 16
+Volume: 9
+Range: 2
+Discrimination: 4

diff --git a/modular/shell/exercises/hearing/data/Frank_Richard/NOTES b/modular/shell/exercises/hearing/data/Frank_Richard/NOTES
new file mode 100644 (file)
index 0000000..0aed0d3
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Frank_Richard/NOTES
@@ -0,0 +1,2 @@
+Fuse blew midway through this weeks data taking,
+fewer results than last week.

diff --git a/modular/shell/exercises/hearing/data/Frank_Richard/data_212 b/modular/shell/exercises/hearing/data/Frank_Richard/data_212
new file mode 100644 (file)
index 0000000..f2b536e
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Frank_Richard/data_212
@@ -0,0 +1,9 @@
+# 
+Reported: Sat Jul 30 09:11:13 2011
+Subject: gingerBeatle174
+Year/month of birth: 1991/09
+Sex: N
+CI type: 15
+Volume: 5
+Range: 6
+Discrimination: 2

diff --git a/modular/shell/exercises/hearing/data/Frank_Richard/data_221 b/modular/shell/exercises/hearing/data/Frank_Richard/data_221
new file mode 100644 (file)
index 0000000..8f9b90f
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Frank_Richard/data_221
@@ -0,0 +1,9 @@
+# 
+Reported: Thu Jun 9 11:29:21 2011
+Subject: robynBeet183
+Year/month of birth: 1996/09
+Sex: N
+CI type: 17
+Volume: 3
+Range: 9
+Discrimination: 3

diff --git a/modular/shell/exercises/hearing/data/Frank_Richard/data_224 b/modular/shell/exercises/hearing/data/Frank_Richard/data_224
new file mode 100644 (file)
index 0000000..8e9e312
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Frank_Richard/data_224
@@ -0,0 +1,9 @@
+# 
+Reported: Thu Jul 21 13:35:25 2011
+Subject: poshCarrot186
+Year/month of birth: 1991/07
+Sex: N
+CI type: 24
+Volume: 6
+Range: 6
+Discrimination: 4

diff --git a/modular/shell/exercises/hearing/data/Frank_Richard/data_233 b/modular/shell/exercises/hearing/data/Frank_Richard/data_233
new file mode 100644 (file)
index 0000000..eba1432
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Frank_Richard/data_233
@@ -0,0 +1,9 @@
+# 
+Reported: Wed Jul 20 14:52:31 2011
+Subject: scarySync192
+Year/month of birth: 1997/02
+Sex: N
+CI type: 6
+Volume: 6
+Range: 5
+Discrimination: 3

diff --git a/modular/shell/exercises/hearing/data/Frank_Richard/data_237 b/modular/shell/exercises/hearing/data/Frank_Richard/data_237
new file mode 100644 (file)
index 0000000..0c462db
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Frank_Richard/data_237
@@ -0,0 +1,9 @@
+# 
+Reported: Tue Aug 30 13:12:59 2011
+Subject: ringoBroccoli195
+Year/month of birth: 1998/01
+Sex: F
+CI type: 19
+Volume: 7
+Range: 6
+Discrimination: 7

diff --git a/modular/shell/exercises/hearing/data/Frank_Richard/data_247 b/modular/shell/exercises/hearing/data/Frank_Richard/data_247
new file mode 100644 (file)
index 0000000..b5d84ab
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Frank_Richard/data_247
@@ -0,0 +1,9 @@
+# 
+Reported: Wed Jun 8 12:04:27 2011
+Subject: paulBackstreet202
+Year/month of birth: 1998/08
+Sex: N
+CI type: 12
+Volume: 1
+Range: 7
+Discrimination: 2

diff --git a/modular/shell/exercises/hearing/data/Frank_Richard/data_252 b/modular/shell/exercises/hearing/data/Frank_Richard/data_252
new file mode 100644 (file)
index 0000000..48ec2ac
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Frank_Richard/data_252
@@ -0,0 +1,9 @@
+# 
+Reported: Sat Sep 3 08:12:49 2011
+Subject: beyonceAsparagus207
+Year/month of birth: 1994/02
+Sex: M
+CI type: 14
+Volume: 8
+Range: 6
+Discrimination: 8

diff --git a/modular/shell/exercises/hearing/data/Frank_Richard/data_254 b/modular/shell/exercises/hearing/data/Frank_Richard/data_254
new file mode 100644 (file)
index 0000000..e7ff474
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Frank_Richard/data_254
@@ -0,0 +1,9 @@
+# 
+Reported: Thu Sep 22 13:51:16 2011
+Subject: beyonceCarrot209
+Year/month of birth: 1992/03
+Sex: M
+CI type: 1
+Volume: 5
+Range: 1
+Discrimination: 6

diff --git a/modular/shell/exercises/hearing/data/Frank_Richard/data_258 b/modular/shell/exercises/hearing/data/Frank_Richard/data_258
new file mode 100644 (file)
index 0000000..ef51e63
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Frank_Richard/data_258
@@ -0,0 +1,9 @@
+# 
+Reported: Mon Sep 19 13:31:10 2011
+Subject: paulBroccoli212
+Year/month of birth: 1997/10
+Sex: F
+CI type: 1
+Volume: 4
+Range: 9
+Discrimination: 3

diff --git a/modular/shell/exercises/hearing/data/Frank_Richard/data_259 b/modular/shell/exercises/hearing/data/Frank_Richard/data_259
new file mode 100644 (file)
index 0000000..1aa8d72
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Frank_Richard/data_259
@@ -0,0 +1,9 @@
+# 
+Reported: Wed Jun 29 08:26:52 2011
+Subject: paulBroccoli212
+Year/month of birth: 1997/10
+Sex: F
+CI type: 1
+Volume: 2
+Range: 7
+Discrimination: 2

diff --git a/modular/shell/exercises/hearing/data/Frank_Richard/data_272 b/modular/shell/exercises/hearing/data/Frank_Richard/data_272
new file mode 100644 (file)
index 0000000..d85ffa6
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Frank_Richard/data_272
@@ -0,0 +1,9 @@
+# 
+Reported: Sat Sep 3 15:55:29 2011
+Subject: ringoBeatle223
+Year/month of birth: 1999/03
+Sex: F
+CI type: 25
+Volume: 7
+Range: 10
+Discrimination: 8

diff --git a/modular/shell/exercises/hearing/data/Frank_Richard/data_273 b/modular/shell/exercises/hearing/data/Frank_Richard/data_273
new file mode 100644 (file)
index 0000000..aca95dc
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Frank_Richard/data_273
@@ -0,0 +1,9 @@
+# 
+Reported: Mon Sep 19 14:06:09 2011
+Subject: georgeBroccoli224
+Year/month of birth: 1991/02
+Sex: M
+CI type: 1
+Volume: 4
+Range: 4
+Discrimination: 5

diff --git a/modular/shell/exercises/hearing/data/Frank_Richard/data_285 b/modular/shell/exercises/hearing/data/Frank_Richard/data_285
new file mode 100644 (file)
index 0000000..a2121b2
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Frank_Richard/data_285
@@ -0,0 +1,9 @@
+# 
+Reported: Wed Jul 20 08:14:06 2011
+Subject: gingerMcCartney236
+Year/month of birth: 1993/10
+Sex: F
+CI type: 10
+Volume: 3
+Range: 9
+Discrimination: 5

diff --git a/modular/shell/exercises/hearing/data/Frank_Richard/data_291 b/modular/shell/exercises/hearing/data/Frank_Richard/data_291
new file mode 100644 (file)
index 0000000..7c873b7
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Frank_Richard/data_291
@@ -0,0 +1,9 @@
+# 
+Reported: Fri May 13 14:39:03 2011
+Subject: babyJonas240
+Year/month of birth: 1993/03
+Sex: M
+CI type: 3
+Volume: 0
+Range: 9
+Discrimination: 3

diff --git a/modular/shell/exercises/hearing/data/Frank_Richard/data_295 b/modular/shell/exercises/hearing/data/Frank_Richard/data_295
new file mode 100644 (file)
index 0000000..aaf185d
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Frank_Richard/data_295
@@ -0,0 +1,9 @@
+# 
+Reported: Sat Jun 4 11:59:25 2011
+Subject: princeMcCartney241
+Year/month of birth: 1992/01
+Sex: M
+CI type: 25
+Volume: 5
+Range: 3
+Discrimination: 6

diff --git a/modular/shell/exercises/hearing/data/Frank_Richard/data_316 b/modular/shell/exercises/hearing/data/Frank_Richard/data_316
new file mode 100644 (file)
index 0000000..ee62096
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Frank_Richard/data_316
@@ -0,0 +1,9 @@
+# 
+Reported: Mon Aug 1 14:12:02 2011
+Subject: gingerSpice253
+Year/month of birth: 1996/10
+Sex: F
+CI type: 20
+Volume: 7
+Range: 4
+Discrimination: 4

diff --git a/modular/shell/exercises/hearing/data/Frank_Richard/data_323 b/modular/shell/exercises/hearing/data/Frank_Richard/data_323
new file mode 100644 (file)
index 0000000..06e78ad
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Frank_Richard/data_323
@@ -0,0 +1,9 @@
+# 
+Reported: Wed Aug 17 08:38:30 2011
+Subject: babySpice258
+Year/month of birth: 1994/03
+Sex: F
+CI type: 19
+Volume: 8
+Range: 5
+Discrimination: 4

diff --git a/modular/shell/exercises/hearing/data/Frank_Richard/data_327 b/modular/shell/exercises/hearing/data/Frank_Richard/data_327
new file mode 100644 (file)
index 0000000..e4e14dc
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Frank_Richard/data_327
@@ -0,0 +1,9 @@
+# 
+Reported: Fri May 13 12:19:05 2011
+Subject: georgeLennon262
+Year/month of birth: 1998/09
+Sex: M
+CI type: 5
+Volume: 1
+Range: 8
+Discrimination: 3

diff --git a/modular/shell/exercises/hearing/data/Frank_Richard/data_329 b/modular/shell/exercises/hearing/data/Frank_Richard/data_329
new file mode 100644 (file)
index 0000000..455ded4
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Frank_Richard/data_329
@@ -0,0 +1,9 @@
+# 
+Reported: Fri Sep 23 13:40:42 2011
+Subject: paulSpice264
+Year/month of birth: 1995/11
+Sex: F
+CI type: 15
+Volume: 8
+Range: 8
+Discrimination: 6

diff --git a/modular/shell/exercises/hearing/data/Frank_Richard/data_366 b/modular/shell/exercises/hearing/data/Frank_Richard/data_366
new file mode 100644 (file)
index 0000000..562b5c3
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Frank_Richard/data_366
@@ -0,0 +1,9 @@
+# 
+Reported: Tue Jul 12 16:57:17 2011
+Subject: madonnaBackstreet295
+Year/month of birth: 1996/02
+Sex: F
+CI type: 9
+Volume: 3
+Range: 7
+Discrimination: 6

diff --git a/modular/shell/exercises/hearing/data/Frank_Richard/data_378 b/modular/shell/exercises/hearing/data/Frank_Richard/data_378
new file mode 100644 (file)
index 0000000..4942ce9
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Frank_Richard/data_378
@@ -0,0 +1,9 @@
+# 
+Reported: Fri Jun 10 13:02:09 2011
+Subject: beyonceJonas304
+Year/month of birth: 1995/11
+Sex: F
+CI type: 16
+Volume: 5
+Range: 5
+Discrimination: 6

diff --git a/modular/shell/exercises/hearing/data/Frank_Richard/data_381 b/modular/shell/exercises/hearing/data/Frank_Richard/data_381
new file mode 100644 (file)
index 0000000..a647e01
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Frank_Richard/data_381
@@ -0,0 +1,9 @@
+# 
+Reported: Wed Sep 28 11:17:12 2011
+Subject: scaryJonas306
+Year/month of birth: 1996/07
+Sex: N
+CI type: 4
+Volume: 5
+Range: 10
+Discrimination: 7

diff --git a/modular/shell/exercises/hearing/data/Frank_Richard/data_385 b/modular/shell/exercises/hearing/data/Frank_Richard/data_385
new file mode 100644 (file)
index 0000000..6f51f40
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Frank_Richard/data_385
@@ -0,0 +1,9 @@
+# 
+Reported: Tue Aug 23 12:20:01 2011
+Subject: jayBeatle309
+Year/month of birth: 1997/06
+Sex: N
+CI type: 15
+Volume: 5
+Range: 4
+Discrimination: 6

diff --git a/modular/shell/exercises/hearing/data/Frank_Richard/data_388 b/modular/shell/exercises/hearing/data/Frank_Richard/data_388
new file mode 100644 (file)
index 0000000..794f043
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Frank_Richard/data_388
@@ -0,0 +1,9 @@
+# 
+Reported: Sun Aug 28 10:11:57 2011
+Subject: jaySync312
+Year/month of birth: 1991/10
+Sex: M
+CI type: 21
+Volume: 7
+Range: 5
+Discrimination: 4

diff --git a/modular/shell/exercises/hearing/data/Frank_Richard/data_398 b/modular/shell/exercises/hearing/data/Frank_Richard/data_398
new file mode 100644 (file)
index 0000000..5e732fe
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Frank_Richard/data_398
@@ -0,0 +1,9 @@
+# 
+Reported: Wed Jun 1 14:47:12 2011
+Subject: poshBeatle321
+Year/month of birth: 1991/08
+Sex: M
+CI type: 23
+Volume: 2
+Range: 5
+Discrimination: 7

diff --git a/modular/shell/exercises/hearing/data/Frank_Richard/data_404 b/modular/shell/exercises/hearing/data/Frank_Richard/data_404
new file mode 100644 (file)
index 0000000..45e4a03
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Frank_Richard/data_404
@@ -0,0 +1,9 @@
+# 
+Reported: Fri Jun 3 10:08:03 2011
+Subject: babyLennon326
+Year/month of birth: 1998/02
+Sex: F
+CI type: 17
+Volume: 2
+Range: 9
+Discrimination: 7

diff --git a/modular/shell/exercises/hearing/data/Frank_Richard/data_405 b/modular/shell/exercises/hearing/data/Frank_Richard/data_405
new file mode 100644 (file)
index 0000000..a25737c
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Frank_Richard/data_405
@@ -0,0 +1,9 @@
+# 
+Reported: Fri Jul 29 11:29:08 2011
+Subject: babyLennon326
+Year/month of birth: 1998/02
+Sex: F
+CI type: 17
+Volume: 3
+Range: 9
+Discrimination: 8

diff --git a/modular/shell/exercises/hearing/data/Frank_Richard/data_417 b/modular/shell/exercises/hearing/data/Frank_Richard/data_417
new file mode 100644 (file)
index 0000000..c3bcabb
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Frank_Richard/data_417
@@ -0,0 +1,9 @@
+# 
+Reported: Mon Sep 12 10:55:23 2011
+Subject: madonnaJonas334
+Year/month of birth: 1997/05
+Sex: M
+CI type: 7
+Volume: 5
+Range: 8
+Discrimination: 8

diff --git a/modular/shell/exercises/hearing/data/Frank_Richard/data_428 b/modular/shell/exercises/hearing/data/Frank_Richard/data_428
new file mode 100644 (file)
index 0000000..d89350f
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Frank_Richard/data_428
@@ -0,0 +1,9 @@
+# 
+Reported: Sat Jul 16 10:04:22 2011
+Subject: paulAsparagus344
+Year/month of birth: 1998/12
+Sex: N
+CI type: 21
+Volume: 4
+Range: 9
+Discrimination: 2

diff --git a/modular/shell/exercises/hearing/data/Frank_Richard/data_429 b/modular/shell/exercises/hearing/data/Frank_Richard/data_429
new file mode 100644 (file)
index 0000000..29f9c8c
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Frank_Richard/data_429
@@ -0,0 +1,9 @@
+# 
+Reported: Tue Jul 5 15:56:08 2011
+Subject: madonnaLennon345
+Year/month of birth: 1996/02
+Sex: F
+CI type: 8
+Volume: 3
+Range: 5
+Discrimination: 4

diff --git a/modular/shell/exercises/hearing/data/Frank_Richard/data_433 b/modular/shell/exercises/hearing/data/Frank_Richard/data_433
new file mode 100644 (file)
index 0000000..42ceac0
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Frank_Richard/data_433
@@ -0,0 +1,9 @@
+# 
+Reported: Sun Jul 3 16:22:47 2011
+Subject: robynSpice349
+Year/month of birth: 1997/10
+Sex: M
+CI type: 19
+Volume: 4
+Range: 8
+Discrimination: 7

diff --git a/modular/shell/exercises/hearing/data/Frank_Richard/data_436 b/modular/shell/exercises/hearing/data/Frank_Richard/data_436
new file mode 100644 (file)
index 0000000..4c65f7f
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Frank_Richard/data_436
@@ -0,0 +1,9 @@
+# 
+Reported: Fri Jul 15 13:24:50 2011
+Subject: robynSpice349
+Year/month of birth: 1997/10
+Sex: M
+CI type: 19
+Volume: 5
+Range: 7
+Discrimination: 8

diff --git a/modular/shell/exercises/hearing/data/Frank_Richard/data_439 b/modular/shell/exercises/hearing/data/Frank_Richard/data_439
new file mode 100644 (file)
index 0000000..00281a2
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Frank_Richard/data_439
@@ -0,0 +1,9 @@
+# 
+Reported: Fri May 27 08:03:39 2011
+Subject: robynBeatle351
+Year/month of birth: 1997/02
+Sex: M
+CI type: 25
+Volume: 6
+Range: 9
+Discrimination: 9

diff --git a/modular/shell/exercises/hearing/data/Frank_Richard/data_444 b/modular/shell/exercises/hearing/data/Frank_Richard/data_444
new file mode 100644 (file)
index 0000000..de2d708
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Frank_Richard/data_444
@@ -0,0 +1,9 @@
+# 
+Reported: Mon Jul 11 10:59:18 2011
+Subject: gingerLennon353
+Year/month of birth: 1994/09
+Sex: F
+CI type: 16
+Volume: 5
+Range: 8
+Discrimination: 3

diff --git a/modular/shell/exercises/hearing/data/Frank_Richard/data_461 b/modular/shell/exercises/hearing/data/Frank_Richard/data_461
new file mode 100644 (file)
index 0000000..33bc43c
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Frank_Richard/data_461
@@ -0,0 +1,9 @@
+# 
+Reported: Fri May 20 11:02:49 2011
+Subject: beyonceAsparagus370
+Year/month of birth: 1991/08
+Sex: M
+CI type: 12
+Volume: 6
+Range: 6
+Discrimination: 4

diff --git a/modular/shell/exercises/hearing/data/Frank_Richard/data_477 b/modular/shell/exercises/hearing/data/Frank_Richard/data_477
new file mode 100644 (file)
index 0000000..7d5ca79
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Frank_Richard/data_477
@@ -0,0 +1,9 @@
+# 
+Reported: Mon Jul 11 13:10:54 2011
+Subject: babySync385
+Year/month of birth: 1996/01
+Sex: N
+CI type: 21
+Volume: 3
+Range: 8
+Discrimination: 7

diff --git a/modular/shell/exercises/hearing/data/Frank_Richard/data_479 b/modular/shell/exercises/hearing/data/Frank_Richard/data_479
new file mode 100644 (file)
index 0000000..e187146
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Frank_Richard/data_479
@@ -0,0 +1,9 @@
+# 
+Reported: Wed Sep 14 13:23:49 2011
+Subject: johnAsparagus387
+Year/month of birth: 1998/07
+Sex: N
+CI type: 12
+Volume: 8
+Range: 6
+Discrimination: 3

diff --git a/modular/shell/exercises/hearing/data/Frank_Richard/data_491 b/modular/shell/exercises/hearing/data/Frank_Richard/data_491
new file mode 100644 (file)
index 0000000..528de9b
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Frank_Richard/data_491
@@ -0,0 +1,9 @@
+# 
+Reported: Tue Aug 9 11:38:51 2011
+Subject: poshBackstreet391
+Year/month of birth: 1996/05
+Sex: N
+CI type: 14
+Volume: 4
+Range: 6
+Discrimination: 3

diff --git a/modular/shell/exercises/hearing/data/Frank_Richard/data_494 b/modular/shell/exercises/hearing/data/Frank_Richard/data_494
new file mode 100644 (file)
index 0000000..a066ab0
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Frank_Richard/data_494
@@ -0,0 +1,9 @@
+# 
+Reported: Sun Sep 4 12:02:37 2011
+Subject: madonnaBeet394
+Year/month of birth: 1999/02
+Sex: N
+CI type: 1
+Volume: 9
+Range: 8
+Discrimination: 8

diff --git a/modular/shell/exercises/hearing/data/Frank_Richard/data_500 b/modular/shell/exercises/hearing/data/Frank_Richard/data_500
new file mode 100644 (file)
index 0000000..b7cdceb
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Frank_Richard/data_500
@@ -0,0 +1,9 @@
+# 
+Reported: Sat Jul 30 13:06:28 2011
+Subject: scaryLennon399
+Year/month of birth: 1999/08
+Sex: F
+CI type: 12
+Volume: 3
+Range: 9
+Discrimination: 6

diff --git a/modular/shell/exercises/hearing/data/Frank_Richard/data_503 b/modular/shell/exercises/hearing/data/Frank_Richard/data_503
new file mode 100644 (file)
index 0000000..e04ce78
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Frank_Richard/data_503
@@ -0,0 +1,9 @@
+# 
+Reported: Wed Sep 28 10:18:06 2011
+Subject: scaryLennon399
+Year/month of birth: 1999/08
+Sex: F
+CI type: 12
+Volume: 4
+Range: 10
+Discrimination: 8

diff --git a/modular/shell/exercises/hearing/data/Frank_Richard/data_504 b/modular/shell/exercises/hearing/data/Frank_Richard/data_504
new file mode 100644 (file)
index 0000000..b8fd930
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Frank_Richard/data_504
@@ -0,0 +1,9 @@
+# 
+Reported: Mon Aug 22 16:48:55 2011
+Subject: paulCarrot400
+Year/month of birth: 1991/06
+Sex: N
+CI type: 22
+Volume: 9
+Range: 7
+Discrimination: 7

diff --git a/modular/shell/exercises/hearing/data/Frank_Richard/data_507 b/modular/shell/exercises/hearing/data/Frank_Richard/data_507
new file mode 100644 (file)
index 0000000..b0a5811
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Frank_Richard/data_507
@@ -0,0 +1,9 @@
+# 
+Reported: Sat Aug 6 13:22:40 2011
+Subject: poshBeet403
+Year/month of birth: 1997/09
+Sex: N
+CI type: 12
+Volume: 5
+Range: 7
+Discrimination: 5

diff --git a/modular/shell/exercises/hearing/data/Frank_Richard/data_508 b/modular/shell/exercises/hearing/data/Frank_Richard/data_508
new file mode 100644 (file)
index 0000000..a1337da
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Frank_Richard/data_508
@@ -0,0 +1,9 @@
+# 
+Reported: Mon May 16 08:53:11 2011
+Subject: babyMcCartney404
+Year/month of birth: 1997/03
+Sex: N
+CI type: 20
+Volume: 4
+Range: 8
+Discrimination: 6

diff --git a/modular/shell/exercises/hearing/data/Frank_Richard/data_512 b/modular/shell/exercises/hearing/data/Frank_Richard/data_512
new file mode 100644 (file)
index 0000000..4648622
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Frank_Richard/data_512
@@ -0,0 +1,9 @@
+# 
+Reported: Mon Aug 1 14:11:44 2011
+Subject: ringoAsparagus406
+Year/month of birth: 1993/07
+Sex: F
+CI type: 1
+Volume: 7
+Range: 5
+Discrimination: 4

diff --git a/modular/shell/exercises/hearing/data/Frank_Richard/data_519 b/modular/shell/exercises/hearing/data/Frank_Richard/data_519
new file mode 100644 (file)
index 0000000..31aa10b
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Frank_Richard/data_519
@@ -0,0 +1,9 @@
+# 
+Reported: Wed May 18 16:45:36 2011
+Subject: madonnaJonas411
+Year/month of birth: 1998/06
+Sex: N
+CI type: 23
+Volume: 6
+Range: 8
+Discrimination: 7

diff --git a/modular/shell/exercises/hearing/data/Frank_Richard/data_533 b/modular/shell/exercises/hearing/data/Frank_Richard/data_533
new file mode 100644 (file)
index 0000000..1b9e288
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Frank_Richard/data_533
@@ -0,0 +1,9 @@
+# 
+Reported: Sat Aug 20 12:45:37 2011
+Subject: babyHarrison418
+Year/month of birth: 1994/09
+Sex: M
+CI type: 3
+Volume: 4
+Range: 7
+Discrimination: 3

diff --git a/modular/shell/exercises/hearing/data/Frank_Richard/data_537 b/modular/shell/exercises/hearing/data/Frank_Richard/data_537
new file mode 100644 (file)
index 0000000..6c2779c
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Frank_Richard/data_537
@@ -0,0 +1,9 @@
+# 
+Reported: Fri Aug 12 12:37:40 2011
+Subject: scaryMcCartney421
+Year/month of birth: 1996/10
+Sex: F
+CI type: 9
+Volume: 5
+Range: 5
+Discrimination: 2

diff --git a/modular/shell/exercises/hearing/data/Frank_Richard/data_538 b/modular/shell/exercises/hearing/data/Frank_Richard/data_538
new file mode 100644 (file)
index 0000000..75c64ab
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Frank_Richard/data_538
@@ -0,0 +1,9 @@
+# 
+Reported: Sun Sep 4 09:06:45 2011
+Subject: ringoBeet422
+Year/month of birth: 1999/10
+Sex: M
+CI type: 20
+Volume: 6
+Range: 10
+Discrimination: 9

diff --git a/modular/shell/exercises/hearing/data/Frank_Richard/data_540 b/modular/shell/exercises/hearing/data/Frank_Richard/data_540
new file mode 100644 (file)
index 0000000..6b1e005
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Frank_Richard/data_540
@@ -0,0 +1,9 @@
+# 
+Reported: Thu May 12 14:09:07 2011
+Subject: ringoBeet422
+Year/month of birth: 1999/10
+Sex: M
+CI type: 20
+Volume: 5
+Range: 8
+Discrimination: 6

diff --git a/modular/shell/exercises/hearing/data/Frank_Richard/data_545 b/modular/shell/exercises/hearing/data/Frank_Richard/data_545
new file mode 100644 (file)
index 0000000..0291f79
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Frank_Richard/data_545
@@ -0,0 +1,9 @@
+# 
+Reported: Wed Aug 17 09:02:49 2011
+Subject: madonnaBroccoli425
+Year/month of birth: 1997/09
+Sex: N
+CI type: 10
+Volume: 1
+Range: 3
+Discrimination: 5

diff --git a/modular/shell/exercises/hearing/data/Frank_Richard/data_555 b/modular/shell/exercises/hearing/data/Frank_Richard/data_555
new file mode 100644 (file)
index 0000000..4c815fe
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Frank_Richard/data_555
@@ -0,0 +1,9 @@
+# 
+Reported: Wed Aug 17 16:46:31 2011
+Subject: princeCarrot434
+Year/month of birth: 1992/09
+Sex: M
+CI type: 16
+Volume: 7
+Range: 2
+Discrimination: 3

diff --git a/modular/shell/exercises/hearing/data/Lawrence/Data0214 b/modular/shell/exercises/hearing/data/Lawrence/Data0214
new file mode 100644 (file)
index 0000000..624fa3b
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Lawrence/Data0214
@@ -0,0 +1,9 @@
+# 
+Reported: Tue May 24 13:29:57 2011
+Subject: madonnaBackstreet176
+Year/month of birth: 1999/10
+Sex: M
+CI type: 19
+Volume: 5
+Range: 7
+Discrimination: 4

diff --git a/modular/shell/exercises/hearing/data/Lawrence/Data0225 b/modular/shell/exercises/hearing/data/Lawrence/Data0225
new file mode 100644 (file)
index 0000000..2fe4362
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Lawrence/Data0225
@@ -0,0 +1,9 @@
+# 
+Reported: Sun May 8 12:15:55 2011
+Subject: beyonceJonas187
+Year/month of birth: 1994/05
+Sex: N
+CI type: 15
+Volume: 3
+Range: 8
+Discrimination: 4

diff --git a/modular/shell/exercises/hearing/data/Lawrence/Data0234 b/modular/shell/exercises/hearing/data/Lawrence/Data0234
new file mode 100644 (file)
index 0000000..3d1acc6
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Lawrence/Data0234
@@ -0,0 +1,9 @@
+# 
+Reported: Thu Jul 28 15:44:10 2011
+Subject: scarySync192
+Year/month of birth: 1997/02
+Sex: N
+CI type: 6
+Volume: 6
+Range: 6
+Discrimination: 3

diff --git a/modular/shell/exercises/hearing/data/Lawrence/Data0248 b/modular/shell/exercises/hearing/data/Lawrence/Data0248
new file mode 100644 (file)
index 0000000..c182e55
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Lawrence/Data0248
@@ -0,0 +1,9 @@
+# 
+Reported: Thu Aug 25 13:46:49 2011
+Subject: madonnaLennon203
+Year/month of birth: 1997/10
+Sex: M
+CI type: 2
+Volume: 4
+Range: 9
+Discrimination: 3

diff --git a/modular/shell/exercises/hearing/data/Lawrence/Data0251 b/modular/shell/exercises/hearing/data/Lawrence/Data0251
new file mode 100644 (file)
index 0000000..b8c9200
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Lawrence/Data0251
@@ -0,0 +1,9 @@
+# 
+Reported: Sun Jun 26 13:44:34 2011
+Subject: gingerSync206
+Year/month of birth: 1992/12
+Sex: N
+CI type: 22
+Volume: 5
+Range: 2
+Discrimination: 7

diff --git a/modular/shell/exercises/hearing/data/Lawrence/Data0253 b/modular/shell/exercises/hearing/data/Lawrence/Data0253
new file mode 100644 (file)
index 0000000..91d7921
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Lawrence/Data0253
@@ -0,0 +1,9 @@
+# 
+Reported: Wed Aug 3 10:03:12 2011
+Subject: scarySpice208
+Year/month of birth: 1996/04
+Sex: M
+CI type: 19
+Volume: 4
+Range: 6
+Discrimination: 5

diff --git a/modular/shell/exercises/hearing/data/Lawrence/Data0260 b/modular/shell/exercises/hearing/data/Lawrence/Data0260
new file mode 100644 (file)
index 0000000..159a275
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Lawrence/Data0260
@@ -0,0 +1,9 @@
+# 
+Reported: Sat May 21 12:53:23 2011
+Subject: paulBroccoli212
+Year/month of birth: 1997/10
+Sex: F
+CI type: 1
+Volume: 3
+Range: 6
+Discrimination: 3

diff --git a/modular/shell/exercises/hearing/data/Lawrence/Data0271 b/modular/shell/exercises/hearing/data/Lawrence/Data0271
new file mode 100644 (file)
index 0000000..ff1e3e2
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Lawrence/Data0271
@@ -0,0 +1,9 @@
+# 
+Reported: Sat Sep 24 10:19:51 2011
+Subject: jayAsparagus222
+Year/month of birth: 1992/05
+Sex: F
+CI type: 20
+Volume: 4
+Range: 1
+Discrimination: 

diff --git a/modular/shell/exercises/hearing/data/Lawrence/Data0275 b/modular/shell/exercises/hearing/data/Lawrence/Data0275
new file mode 100644 (file)
index 0000000..6d50a02
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Lawrence/Data0275
@@ -0,0 +1,9 @@
+# 
+Reported: Thu Sep 15 10:42:17 2011
+Subject: ringoSync226
+Year/month of birth: 1995/10
+Sex: M
+CI type: 14
+Volume: 4
+Range: 4
+Discrimination: 6

diff --git a/modular/shell/exercises/hearing/data/Lawrence/Data0276 b/modular/shell/exercises/hearing/data/Lawrence/Data0276
new file mode 100644 (file)
index 0000000..e2933a9
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Lawrence/Data0276
@@ -0,0 +1,9 @@
+# 
+Reported: Tue Jun 14 16:44:20 2011
+Subject: paulBroccoli227
+Year/month of birth: 1999/10
+Sex: N
+CI type: 8
+Volume: 3
+Range: 8
+Discrimination: 4

diff --git a/modular/shell/exercises/hearing/data/Lawrence/Data0284 b/modular/shell/exercises/hearing/data/Lawrence/Data0284
new file mode 100644 (file)
index 0000000..a1c9747
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Lawrence/Data0284
@@ -0,0 +1,9 @@
+# 
+Reported: Wed Jul 6 16:33:52 2011
+Subject: paulHarrison235
+Year/month of birth: 1997/11
+Sex: F
+CI type: 17
+Volume: 5
+Range: 7
+Discrimination: 4

diff --git a/modular/shell/exercises/hearing/data/Lawrence/Data0296 b/modular/shell/exercises/hearing/data/Lawrence/Data0296
new file mode 100644 (file)
index 0000000..cd38f7d
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Lawrence/Data0296
@@ -0,0 +1,9 @@
+# 
+Reported: Fri Aug 26 12:17:50 2011
+Subject: princeMcCartney241
+Year/month of birth: 1992/01
+Sex: M
+CI type: 25
+Volume: 6
+Range: 3
+Discrimination: 

diff --git a/modular/shell/exercises/hearing/data/Lawrence/Data0300 b/modular/shell/exercises/hearing/data/Lawrence/Data0300
new file mode 100644 (file)
index 0000000..c86c2cb
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Lawrence/Data0300
@@ -0,0 +1,9 @@
+# 
+Reported: Mon Sep 12 14:42:32 2011
+Subject: poshJonas243
+Year/month of birth: 1992/02
+Sex: F
+CI type: 16
+Volume: 4
+Range: 8
+Discrimination: 4

diff --git a/modular/shell/exercises/hearing/data/Lawrence/Data0310 b/modular/shell/exercises/hearing/data/Lawrence/Data0310
new file mode 100644 (file)
index 0000000..67ce139
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Lawrence/Data0310
@@ -0,0 +1,9 @@
+# 
+Reported: Sat Sep 17 12:49:27 2011
+Subject: paulSpice249
+Year/month of birth: 1993/08
+Sex: N
+CI type: 8
+Volume: 7
+Range: 4
+Discrimination: 6

diff --git a/modular/shell/exercises/hearing/data/Lawrence/Data0313 b/modular/shell/exercises/hearing/data/Lawrence/Data0313
new file mode 100644 (file)
index 0000000..699c5c8
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Lawrence/Data0313
@@ -0,0 +1,9 @@
+# 
+Reported: Wed May 25 08:27:38 2011
+Subject: robynStarr251
+Year/month of birth: 1996/04
+Sex: F
+CI type: 24
+Volume: 6
+Range: 3
+Discrimination: 3

diff --git a/modular/shell/exercises/hearing/data/Lawrence/Data0335 b/modular/shell/exercises/hearing/data/Lawrence/Data0335
new file mode 100644 (file)
index 0000000..a1de92c
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Lawrence/Data0335
@@ -0,0 +1,9 @@
+# 
+Reported: Thu May 26 16:28:29 2011
+Subject: scaryJonas269
+Year/month of birth: 1999/05
+Sex: N
+CI type: 16
+Volume: 5
+Range: 7
+Discrimination: 6

diff --git a/modular/shell/exercises/hearing/data/Lawrence/Data0345 b/modular/shell/exercises/hearing/data/Lawrence/Data0345
new file mode 100644 (file)
index 0000000..044cefc
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Lawrence/Data0345
@@ -0,0 +1,9 @@
+# 
+Reported: Wed Jun 15 09:19:55 2011
+Subject: poshHarrison275
+Year/month of birth: 1993/11
+Sex: F
+CI type: 19
+Volume: 5
+Range: 9
+Discrimination: 7

diff --git a/modular/shell/exercises/hearing/data/Lawrence/Data0352 b/modular/shell/exercises/hearing/data/Lawrence/Data0352
new file mode 100644 (file)
index 0000000..047739d
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Lawrence/Data0352
@@ -0,0 +1,9 @@
+# 
+Reported: Mon Jul 25 14:01:36 2011
+Subject: babyMcCartney281
+Year/month of birth: 1991/07
+Sex: M
+CI type: 14
+Volume: 1
+Range: 2
+Discrimination: 4

diff --git a/modular/shell/exercises/hearing/data/Lawrence/Data0361 b/modular/shell/exercises/hearing/data/Lawrence/Data0361
new file mode 100644 (file)
index 0000000..4d0eea0
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Lawrence/Data0361
@@ -0,0 +1,9 @@
+# 
+Reported: Mon May 9 16:29:40 2011
+Subject: scaryAsparagus290
+Year/month of birth: 1991/01
+Sex: F
+CI type: 3
+Volume: 4
+Range: 4
+Discrimination: 3

diff --git a/modular/shell/exercises/hearing/data/Lawrence/Data0362 b/modular/shell/exercises/hearing/data/Lawrence/Data0362
new file mode 100644 (file)
index 0000000..fe32fd6
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Lawrence/Data0362
@@ -0,0 +1,9 @@
+# 
+Reported: Sat May 14 10:26:22 2011
+Subject: gingerHarrison291
+Year/month of birth: 1994/06
+Sex: N
+CI type: 4
+Volume: 6
+Range: 9
+Discrimination: 6

diff --git a/modular/shell/exercises/hearing/data/Lawrence/Data0363 b/modular/shell/exercises/hearing/data/Lawrence/Data0363
new file mode 100644 (file)
index 0000000..6c78dea
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Lawrence/Data0363
@@ -0,0 +1,9 @@
+# 
+Reported: Mon Sep 12 13:31:21 2011
+Subject: ringoJonas292
+Year/month of birth: 1996/02
+Sex: N
+CI type: 20
+Volume: 7
+Range: 8
+Discrimination: 6

diff --git a/modular/shell/exercises/hearing/data/Lawrence/Data0371 b/modular/shell/exercises/hearing/data/Lawrence/Data0371
new file mode 100644 (file)
index 0000000..d5b4ce3
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Lawrence/Data0371
@@ -0,0 +1,9 @@
+# 
+Reported: Sat Aug 13 08:57:47 2011
+Subject: johnHarrison300
+Year/month of birth: 1994/08
+Sex: N
+CI type: 20
+Volume: 5
+Range: 6
+Discrimination: 2

diff --git a/modular/shell/exercises/hearing/data/Lawrence/Data0382 b/modular/shell/exercises/hearing/data/Lawrence/Data0382
new file mode 100644 (file)
index 0000000..dcc1392
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Lawrence/Data0382
@@ -0,0 +1,9 @@
+# 
+Reported: Tue Aug 9 15:43:20 2011
+Subject: scaryJonas306
+Year/month of birth: 1996/07
+Sex: N
+CI type: 4
+Volume: 4
+Range: 9
+Discrimination: 7

diff --git a/modular/shell/exercises/hearing/data/Lawrence/Data0390 b/modular/shell/exercises/hearing/data/Lawrence/Data0390
new file mode 100644 (file)
index 0000000..bfc9af7
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Lawrence/Data0390
@@ -0,0 +1,9 @@
+# 
+Reported: Sat Jun 11 09:23:07 2011
+Subject: poshAsparagus314
+Year/month of birth: 1998/08
+Sex: N
+CI type: 9
+Volume: 3
+Range: 5
+Discrimination: 3

diff --git a/modular/shell/exercises/hearing/data/Lawrence/Data0392 b/modular/shell/exercises/hearing/data/Lawrence/Data0392
new file mode 100644 (file)
index 0000000..39a7b41
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Lawrence/Data0392
@@ -0,0 +1,9 @@
+# 
+Reported: Tue Jul 19 08:52:02 2011
+Subject: robynStarr316
+Year/month of birth: 1997/02
+Sex: M
+CI type: 10
+Volume: 5
+Range: 9
+Discrimination: 3

diff --git a/modular/shell/exercises/hearing/data/Lawrence/Data0400 b/modular/shell/exercises/hearing/data/Lawrence/Data0400
new file mode 100644 (file)
index 0000000..3fb0ac7
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Lawrence/Data0400
@@ -0,0 +1,9 @@
+# 
+Reported: Sun Aug 28 08:48:53 2011
+Subject: gingerLennon323
+Year/month of birth: 1996/03
+Sex: M
+CI type: 13
+Volume: 6
+Range: 6
+Discrimination: 4

diff --git a/modular/shell/exercises/hearing/data/Lawrence/Data0403 b/modular/shell/exercises/hearing/data/Lawrence/Data0403
new file mode 100644 (file)
index 0000000..ac422f0
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Lawrence/Data0403
@@ -0,0 +1,9 @@
+# 
+Reported: Tue May 24 11:59:38 2011
+Subject: babyLennon326
+Year/month of birth: 1998/02
+Sex: F
+CI type: 17
+Volume: 3
+Range: 9
+Discrimination: 7

diff --git a/modular/shell/exercises/hearing/data/Lawrence/Data0410 b/modular/shell/exercises/hearing/data/Lawrence/Data0410
new file mode 100644 (file)
index 0000000..0c725e9
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Lawrence/Data0410
@@ -0,0 +1,9 @@
+# 
+Reported: Fri Aug 12 14:26:35 2011
+Subject: beyonceBeet331
+Year/month of birth: 1998/03
+Sex: F
+CI type: 24
+Volume: 2
+Range: 5
+Discrimination: 7

diff --git a/modular/shell/exercises/hearing/data/Lawrence/Data0411 b/modular/shell/exercises/hearing/data/Lawrence/Data0411
new file mode 100644 (file)
index 0000000..99ef614
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Lawrence/Data0411
@@ -0,0 +1,9 @@
+# 
+Reported: Thu Sep 8 08:43:35 2011
+Subject: poshHarrison332
+Year/month of birth: 1994/04
+Sex: M
+CI type: 18
+Volume: 5
+Range: 6
+Discrimination: 8

diff --git a/modular/shell/exercises/hearing/data/Lawrence/Data0423 b/modular/shell/exercises/hearing/data/Lawrence/Data0423
new file mode 100644 (file)
index 0000000..987e24c
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Lawrence/Data0423
@@ -0,0 +1,9 @@
+# 
+Reported: Sat Sep 17 11:20:22 2011
+Subject: jayBroccoli339
+Year/month of birth: 1998/11
+Sex: M
+CI type: 11
+Volume: 3
+Range: 4
+Discrimination: 4

diff --git a/modular/shell/exercises/hearing/data/Lawrence/Data0430 b/modular/shell/exercises/hearing/data/Lawrence/Data0430
new file mode 100644 (file)
index 0000000..8386d9b
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Lawrence/Data0430
@@ -0,0 +1,9 @@
+# 
+Reported: Thu Aug 25 11:59:54 2011
+Subject: poshJonas346
+Year/month of birth: 1995/09
+Sex: F
+CI type: 7
+Volume: 3
+Range: 9
+Discrimination: 6

diff --git a/modular/shell/exercises/hearing/data/Lawrence/Data0437 b/modular/shell/exercises/hearing/data/Lawrence/Data0437
new file mode 100644 (file)
index 0000000..f58eaff
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Lawrence/Data0437
@@ -0,0 +1,9 @@
+# 
+Reported: Sat Aug 13 11:33:02 2011
+Subject: robynBeatle350
+Year/month of birth: 1995/04
+Sex: M
+CI type: 1
+Volume: 4
+Range: 2
+Discrimination: 1

diff --git a/modular/shell/exercises/hearing/data/Lawrence/Data0440 b/modular/shell/exercises/hearing/data/Lawrence/Data0440
new file mode 100644 (file)
index 0000000..54377d9
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Lawrence/Data0440
@@ -0,0 +1,9 @@
+# 
+Reported: Sun May 29 16:20:51 2011
+Subject: robynBeatle351
+Year/month of birth: 1997/02
+Sex: M
+CI type: 25
+Volume: 6
+Range: 9
+Discrimination: 8

diff --git a/modular/shell/exercises/hearing/data/Lawrence/Data0441 b/modular/shell/exercises/hearing/data/Lawrence/Data0441
new file mode 100644 (file)
index 0000000..faadcc9
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Lawrence/Data0441
@@ -0,0 +1,9 @@
+# 
+Reported: Mon Jul 25 12:36:14 2011
+Subject: robynBeatle351
+Year/month of birth: 1997/02
+Sex: M
+CI type: 25
+Volume: 6
+Range: 9
+Discrimination: 8

diff --git a/modular/shell/exercises/hearing/data/Lawrence/Data0442 b/modular/shell/exercises/hearing/data/Lawrence/Data0442
new file mode 100644 (file)
index 0000000..7b358b1
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Lawrence/Data0442
@@ -0,0 +1,9 @@
+# 
+Reported: Sun Jun 12 16:59:19 2011
+Subject: robynBeatle351
+Year/month of birth: 1997/02
+Sex: M
+CI type: 25
+Volume: 6
+Range: 9
+Discrimination: 9

diff --git a/modular/shell/exercises/hearing/data/Lawrence/Data0447 b/modular/shell/exercises/hearing/data/Lawrence/Data0447
new file mode 100644 (file)
index 0000000..4ea09a3
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Lawrence/Data0447
@@ -0,0 +1,9 @@
+# 
+Reported: Thu Jun 16 16:06:30 2011
+Subject: beyonceBeatle356
+Year/month of birth: 1999/08
+Sex: F
+CI type: 16
+Volume: 7
+Range: 7
+Discrimination: 5

diff --git a/modular/shell/exercises/hearing/data/Lawrence/Data0449 b/modular/shell/exercises/hearing/data/Lawrence/Data0449
new file mode 100644 (file)
index 0000000..9ed6bf3
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Lawrence/Data0449
@@ -0,0 +1,9 @@
+# 
+Reported: Sun Sep 4 09:45:13 2011
+Subject: madonnaStarr358
+Year/month of birth: 1998/02
+Sex: M
+CI type: 11
+Volume: 7
+Range: 4
+Discrimination: 5

diff --git a/modular/shell/exercises/hearing/data/Lawrence/Data0452 b/modular/shell/exercises/hearing/data/Lawrence/Data0452
new file mode 100644 (file)
index 0000000..81c3ff6
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Lawrence/Data0452
@@ -0,0 +1,9 @@
+# 
+Reported: Sat Jul 16 10:50:02 2011
+Subject: babyCarrot361
+Year/month of birth: 1991/01
+Sex: F
+CI type: 19
+Volume: 5
+Range: 6
+Discrimination: 6

diff --git a/modular/shell/exercises/hearing/data/Lawrence/Data0455 b/modular/shell/exercises/hearing/data/Lawrence/Data0455
new file mode 100644 (file)
index 0000000..fab09f0
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Lawrence/Data0455
@@ -0,0 +1,9 @@
+# 
+Reported: Mon Jul 4 16:15:34 2011
+Subject: georgeBeatle364
+Year/month of birth: 1992/08
+Sex: F
+CI type: 10
+Volume: 3
+Range: 5
+Discrimination: 5

diff --git a/modular/shell/exercises/hearing/data/Lawrence/Data0456 b/modular/shell/exercises/hearing/data/Lawrence/Data0456
new file mode 100644 (file)
index 0000000..f1fc7ea
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Lawrence/Data0456
@@ -0,0 +1,9 @@
+# 
+Reported: Wed Jun 29 08:30:45 2011
+Subject: johnStarr365
+Year/month of birth: 1998/05
+Sex: F
+CI type: 10
+Volume: 5
+Range: 8
+Discrimination: 5

diff --git a/modular/shell/exercises/hearing/data/Lawrence/Data0463 b/modular/shell/exercises/hearing/data/Lawrence/Data0463
new file mode 100644 (file)
index 0000000..fc0c97f
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Lawrence/Data0463
@@ -0,0 +1,9 @@
+# 
+Reported: Thu Jun 16 08:39:17 2011
+Subject: georgeHarrison372
+Year/month of birth: 1995/08
+Sex: N
+CI type: 10
+Volume: 6
+Range: 0
+Discrimination: 4

diff --git a/modular/shell/exercises/hearing/data/Lawrence/Data0483 b/modular/shell/exercises/hearing/data/Lawrence/Data0483
new file mode 100644 (file)
index 0000000..d252663
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Lawrence/Data0483
@@ -0,0 +1,9 @@
+# 
+Reported: Tue Jun 7 12:59:49 2011
+Subject: jayBroccoli389
+Year/month of birth: 1999/12
+Sex: F
+CI type: 16
+Volume: 2
+Range: 9
+Discrimination: 6

diff --git a/modular/shell/exercises/hearing/data/Lawrence/Data0492 b/modular/shell/exercises/hearing/data/Lawrence/Data0492
new file mode 100644 (file)
index 0000000..bf58c90
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Lawrence/Data0492
@@ -0,0 +1,9 @@
+# 
+Reported: Tue Jul 19 14:52:29 2011
+Subject: babyMcCartney392
+Year/month of birth: 1991/11
+Sex: N
+CI type: 17
+Volume: 4
+Range: 5
+Discrimination: 6

diff --git a/modular/shell/exercises/hearing/data/Lawrence/Data0506 b/modular/shell/exercises/hearing/data/Lawrence/Data0506
new file mode 100644 (file)
index 0000000..31142b3
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Lawrence/Data0506
@@ -0,0 +1,9 @@
+# 
+Reported: Wed Aug 17 08:55:39 2011
+Subject: jayCarrot402
+Year/month of birth: 1998/02
+Sex: M
+CI type: 2
+Volume: 0
+Range: 7
+Discrimination: 1

diff --git a/modular/shell/exercises/hearing/data/Lawrence/Data0511 b/modular/shell/exercises/hearing/data/Lawrence/Data0511
new file mode 100644 (file)
index 0000000..3096099
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Lawrence/Data0511
@@ -0,0 +1,9 @@
+# 
+Reported: Sat May 14 15:28:34 2011
+Subject: ringoAsparagus406
+Year/month of birth: 1993/07
+Sex: F
+CI type: 1
+Volume: 8
+Range: 5
+Discrimination: 5

diff --git a/modular/shell/exercises/hearing/data/Lawrence/Data0515 b/modular/shell/exercises/hearing/data/Lawrence/Data0515
new file mode 100644 (file)
index 0000000..e18110f
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Lawrence/Data0515
@@ -0,0 +1,9 @@
+# 
+Reported: Sun Jul 10 11:26:31 2011
+Subject: madonnaBroccoli407
+Year/month of birth: 1993/03
+Sex: F
+CI type: 3
+Volume: 0
+Range: 3
+Discrimination: 1

diff --git a/modular/shell/exercises/hearing/data/Lawrence/Data0522 b/modular/shell/exercises/hearing/data/Lawrence/Data0522
new file mode 100644 (file)
index 0000000..242a249
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Lawrence/Data0522
@@ -0,0 +1,9 @@
+# 
+Reported: Sun Sep 11 15:05:06 2011
+Subject: madonnaJonas411
+Year/month of birth: 1998/06
+Sex: N
+CI type: 23
+Volume: 8
+Range: 9
+Discrimination: 8

diff --git a/modular/shell/exercises/hearing/data/Lawrence/Data0525 b/modular/shell/exercises/hearing/data/Lawrence/Data0525
new file mode 100644 (file)
index 0000000..2da5531
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Lawrence/Data0525
@@ -0,0 +1,9 @@
+# 
+Reported: Mon Jun 27 13:46:07 2011
+Subject: scaryLennon414
+Year/month of birth: 1996/02
+Sex: N
+CI type: 18
+Volume: 3
+Range: 9
+Discrimination: 6

diff --git a/modular/shell/exercises/hearing/data/Lawrence/Data0526 b/modular/shell/exercises/hearing/data/Lawrence/Data0526
new file mode 100644 (file)
index 0000000..3f276a7
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Lawrence/Data0526
@@ -0,0 +1,9 @@
+# 
+Reported: Mon Jun 6 15:01:26 2011
+Subject: scaryLennon414
+Year/month of birth: 1996/02
+Sex: N
+CI type: 18
+Volume: 3
+Range: 9
+Discrimination: 7

diff --git a/modular/shell/exercises/hearing/data/Lawrence/Data0531 b/modular/shell/exercises/hearing/data/Lawrence/Data0531
new file mode 100644 (file)
index 0000000..e85a164
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Lawrence/Data0531
@@ -0,0 +1,9 @@
+# 
+Reported: Tue Sep 6 16:04:49 2011
+Subject: poshMcCartney417
+Year/month of birth: 1992/09
+Sex: N
+CI type: 9
+Volume: 9
+Range: 9
+Discrimination: 4

diff --git a/modular/shell/exercises/hearing/data/Lawrence/Data0544 b/modular/shell/exercises/hearing/data/Lawrence/Data0544
new file mode 100644 (file)
index 0000000..993a2ff
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Lawrence/Data0544
@@ -0,0 +1,9 @@
+# 
+Reported: Sun May 22 10:03:57 2011
+Subject: gingerLennon424
+Year/month of birth: 1996/06
+Sex: N
+CI type: 15
+Volume: 3
+Range: 6
+Discrimination: 4

diff --git a/modular/shell/exercises/hearing/data/Lawrence/Data0554 b/modular/shell/exercises/hearing/data/Lawrence/Data0554
new file mode 100644 (file)
index 0000000..610c01c
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/Lawrence/Data0554
@@ -0,0 +1,9 @@
+# 
+Reported: Tue Aug 2 08:45:59 2011
+Subject: princeCarrot434
+Year/month of birth: 1992/09
+Sex: M
+CI type: 16
+Volume: 9
+Range: 2
+Discrimination: 4

diff --git a/modular/shell/exercises/hearing/data/THOMAS/0213 b/modular/shell/exercises/hearing/data/THOMAS/0213
new file mode 100644 (file)
index 0000000..a3651df
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/THOMAS/0213
@@ -0,0 +1,9 @@
+# 
+Reported: Fri Jun 3 12:44:23 2011
+Subject: georgeMcCartney175
+Year/month of birth: 1998/08
+Sex: N
+CI type: 21
+Volume: 3
+Range: 8
+Discrimination: 5

diff --git a/modular/shell/exercises/hearing/data/THOMAS/0241 b/modular/shell/exercises/hearing/data/THOMAS/0241
new file mode 100644 (file)
index 0000000..3a47917
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/THOMAS/0241
@@ -0,0 +1,9 @@
+# 
+Reported: Fri Aug 12 13:44:31 2011
+Subject: paulSpice199
+Year/month of birth: 1994/01
+Sex: M
+CI type: 24
+Volume: 5
+Range: 9
+Discrimination: 8

diff --git a/modular/shell/exercises/hearing/data/THOMAS/0244 b/modular/shell/exercises/hearing/data/THOMAS/0244
new file mode 100644 (file)
index 0000000..7651a5c
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/THOMAS/0244
@@ -0,0 +1,9 @@
+# 
+Reported: Tue Aug 9 13:07:38 2011
+Subject: scarySync200
+Year/month of birth: 1996/11
+Sex: M
+CI type: 4
+Volume: 4
+Range: 2
+Discrimination: 2

diff --git a/modular/shell/exercises/hearing/data/THOMAS/0249 b/modular/shell/exercises/hearing/data/THOMAS/0249
new file mode 100644 (file)
index 0000000..a54ab88
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/THOMAS/0249
@@ -0,0 +1,9 @@
+# 
+Reported: Fri Aug 5 13:23:15 2011
+Subject: princeHarrison204
+Year/month of birth: 1999/02
+Sex: M
+CI type: 3
+Volume: 4
+Range: 7
+Discrimination: 5

diff --git a/modular/shell/exercises/hearing/data/THOMAS/0274 b/modular/shell/exercises/hearing/data/THOMAS/0274
new file mode 100644 (file)
index 0000000..a565489
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/THOMAS/0274
@@ -0,0 +1,9 @@
+# 
+Reported: Wed May 18 16:35:41 2011
+Subject: babyStarr225
+Year/month of birth: 1992/11
+Sex: M
+CI type: 2
+Volume: 5
+Range: 8
+Discrimination: 3

diff --git a/modular/shell/exercises/hearing/data/THOMAS/0281 b/modular/shell/exercises/hearing/data/THOMAS/0281
new file mode 100644 (file)
index 0000000..50eb8d6
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/THOMAS/0281
@@ -0,0 +1,9 @@
+# 
+Reported: Sun Aug 21 12:27:37 2011
+Subject: robynMcCartney232
+Year/month of birth: 1994/06
+Sex: M
+CI type: 2
+Volume: 4
+Range: 7
+Discrimination: 4

diff --git a/modular/shell/exercises/hearing/data/THOMAS/0287 b/modular/shell/exercises/hearing/data/THOMAS/0287
new file mode 100644 (file)
index 0000000..6bbc197
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/THOMAS/0287
@@ -0,0 +1,9 @@
+# 
+Reported: Thu Aug 11 13:17:20 2011
+Subject: paulLennon237
+Year/month of birth: 1998/11
+Sex: N
+CI type: 10
+Volume: 5
+Range: 7
+Discrimination: 8

diff --git a/modular/shell/exercises/hearing/data/THOMAS/0289 b/modular/shell/exercises/hearing/data/THOMAS/0289
new file mode 100644 (file)
index 0000000..f464070
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/THOMAS/0289
@@ -0,0 +1,9 @@
+# 
+Reported: Wed Sep 21 10:29:36 2011
+Subject: johnHarrison239
+Year/month of birth: 1995/12
+Sex: F
+CI type: 25
+Volume: 6
+Range: 10
+Discrimination: 6

diff --git a/modular/shell/exercises/hearing/data/THOMAS/0298 b/modular/shell/exercises/hearing/data/THOMAS/0298
new file mode 100644 (file)
index 0000000..7b23bbf
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/THOMAS/0298
@@ -0,0 +1,9 @@
+# 
+Reported: Mon Sep 12 09:19:11 2011
+Subject: princeMcCartney241
+Year/month of birth: 1992/01
+Sex: M
+CI type: 25
+Volume: 7
+Range: 4
+Discrimination: 7

diff --git a/modular/shell/exercises/hearing/data/THOMAS/0299 b/modular/shell/exercises/hearing/data/THOMAS/0299
new file mode 100644 (file)
index 0000000..cc5fe50
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/THOMAS/0299
@@ -0,0 +1,9 @@
+# 
+Reported: Thu Sep 1 13:33:15 2011
+Subject: babyAsparagus242
+Year/month of birth: 1993/10
+Sex: F
+CI type: 23
+Volume: 10
+Range: 4
+Discrimination: 

diff --git a/modular/shell/exercises/hearing/data/THOMAS/0301 b/modular/shell/exercises/hearing/data/THOMAS/0301
new file mode 100644 (file)
index 0000000..2670179
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/THOMAS/0301
@@ -0,0 +1,9 @@
+# 
+Reported: Thu Sep 8 15:45:50 2011
+Subject: poshJonas243
+Year/month of birth: 1992/02
+Sex: F
+CI type: 16
+Volume: 4
+Range: 7
+Discrimination: 4

diff --git a/modular/shell/exercises/hearing/data/THOMAS/0302 b/modular/shell/exercises/hearing/data/THOMAS/0302
new file mode 100644 (file)
index 0000000..33acc5c
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/THOMAS/0302
@@ -0,0 +1,9 @@
+# 
+Reported: Wed Jul 6 15:38:07 2011
+Subject: scaryBroccoli244
+Year/month of birth: 1997/12
+Sex: F
+CI type: 1
+Volume: 4
+Range: 6
+Discrimination: 6

diff --git a/modular/shell/exercises/hearing/data/THOMAS/0303 b/modular/shell/exercises/hearing/data/THOMAS/0303
new file mode 100644 (file)
index 0000000..d2e4d44
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/THOMAS/0303
@@ -0,0 +1,9 @@
+# 
+Reported: Tue Jul 12 15:10:58 2011
+Subject: scaryBroccoli244
+Year/month of birth: 1997/12
+Sex: F
+CI type: 1
+Volume: 4
+Range: 5
+Discrimination: 5

diff --git a/modular/shell/exercises/hearing/data/THOMAS/0314 b/modular/shell/exercises/hearing/data/THOMAS/0314
new file mode 100644 (file)
index 0000000..be10170
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/THOMAS/0314
@@ -0,0 +1,9 @@
+# 
+Reported: Tue Jun 14 14:06:23 2011
+Subject: robynStarr251
+Year/month of birth: 1996/04
+Sex: F
+CI type: 24
+Volume: 5
+Range: 2
+Discrimination: 3

diff --git a/modular/shell/exercises/hearing/data/THOMAS/0315 b/modular/shell/exercises/hearing/data/THOMAS/0315
new file mode 100644 (file)
index 0000000..0e84231
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/THOMAS/0315
@@ -0,0 +1,9 @@
+# 
+Reported: Tue May 17 09:33:53 2011
+Subject: paulBeet252
+Year/month of birth: 1998/05
+Sex: M
+CI type: 10
+Volume: 1
+Range: 8
+Discrimination: 3

diff --git a/modular/shell/exercises/hearing/data/THOMAS/0322 b/modular/shell/exercises/hearing/data/THOMAS/0322
new file mode 100644 (file)
index 0000000..660b84d
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/THOMAS/0322
@@ -0,0 +1,9 @@
+# 
+Reported: Wed Jun 8 16:43:12 2011
+Subject: georgeHarrison257
+Year/month of birth: 1998/09
+Sex: M
+CI type: 16
+Volume: 5
+Range: 6
+Discrimination: 3

diff --git a/modular/shell/exercises/hearing/data/THOMAS/0328 b/modular/shell/exercises/hearing/data/THOMAS/0328
new file mode 100644 (file)
index 0000000..0e2d0b4
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/THOMAS/0328
@@ -0,0 +1,9 @@
+# 
+Reported: Sun May 29 13:13:07 2011
+Subject: gingerBackstreet263
+Year/month of birth: 1998/08
+Sex: N
+CI type: 7
+Volume: 3
+Range: 8
+Discrimination: 4

diff --git a/modular/shell/exercises/hearing/data/THOMAS/0333 b/modular/shell/exercises/hearing/data/THOMAS/0333
new file mode 100644 (file)
index 0000000..ef0984a
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/THOMAS/0333
@@ -0,0 +1,9 @@
+# 
+Reported: Sun May 8 09:44:17 2011
+Subject: beyonceZ267
+Year/month of birth: 1992/06
+Sex: N
+CI type: 3
+Volume: 4
+Range: 2
+Discrimination: 6

diff --git a/modular/shell/exercises/hearing/data/THOMAS/0334 b/modular/shell/exercises/hearing/data/THOMAS/0334
new file mode 100644 (file)
index 0000000..61e0024
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/THOMAS/0334
@@ -0,0 +1,9 @@
+# 
+Reported: Sat Sep 10 09:40:09 2011
+Subject: beyonceHarrison268
+Year/month of birth: 1994/05
+Sex: N
+CI type: 4
+Volume: 7
+Range: 7
+Discrimination: 4

diff --git a/modular/shell/exercises/hearing/data/THOMAS/0336 b/modular/shell/exercises/hearing/data/THOMAS/0336
new file mode 100644 (file)
index 0000000..af26999
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/THOMAS/0336
@@ -0,0 +1,9 @@
+# 
+Reported: Tue Sep 20 11:36:06 2011
+Subject: jaySpice270
+Year/month of birth: 1998/01
+Sex: F
+CI type: 1
+Volume: 3
+Range: 10
+Discrimination: 6

diff --git a/modular/shell/exercises/hearing/data/THOMAS/0340 b/modular/shell/exercises/hearing/data/THOMAS/0340
new file mode 100644 (file)
index 0000000..3e9d332
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/THOMAS/0340
@@ -0,0 +1,9 @@
+# 
+Reported: Sun Jun 19 14:51:49 2011
+Subject: princeHarrison273
+Year/month of birth: 1995/03
+Sex: F
+CI type: 2
+Volume: 4
+Range: 3
+Discrimination: 1

diff --git a/modular/shell/exercises/hearing/data/THOMAS/0341 b/modular/shell/exercises/hearing/data/THOMAS/0341
new file mode 100644 (file)
index 0000000..3b0e883
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/THOMAS/0341
@@ -0,0 +1,9 @@
+# 
+Reported: Thu Aug 11 08:20:16 2011
+Subject: princeHarrison273
+Year/month of birth: 1995/03
+Sex: F
+CI type: 2
+Volume: 4
+Range: 3
+Discrimination: 2

diff --git a/modular/shell/exercises/hearing/data/THOMAS/0348 b/modular/shell/exercises/hearing/data/THOMAS/0348
new file mode 100644 (file)
index 0000000..a276a2b
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/THOMAS/0348
@@ -0,0 +1,9 @@
+# 
+Reported: Mon Aug 15 10:39:17 2011
+Subject: georgeLennon278
+Year/month of birth: 1997/08
+Sex: M
+CI type: 2
+Volume: 3
+Range: 8
+Discrimination: 3

diff --git a/modular/shell/exercises/hearing/data/THOMAS/0349 b/modular/shell/exercises/hearing/data/THOMAS/0349
new file mode 100644 (file)
index 0000000..497a8ad
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/THOMAS/0349
@@ -0,0 +1,9 @@
+# 
+Reported: Wed Jul 27 15:38:03 2011
+Subject: poshBroccoli279
+Year/month of birth: 1991/07
+Sex: M
+CI type: 6
+Volume: 5
+Range: 9
+Discrimination: 2

diff --git a/modular/shell/exercises/hearing/data/THOMAS/0351 b/modular/shell/exercises/hearing/data/THOMAS/0351
new file mode 100644 (file)
index 0000000..87c8648
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/THOMAS/0351
@@ -0,0 +1,9 @@
+# 
+Reported: Tue Sep 13 12:08:32 2011
+Subject: babyMcCartney281
+Year/month of birth: 1991/07
+Sex: M
+CI type: 14
+Volume: 2
+Range: 2
+Discrimination: 5

diff --git a/modular/shell/exercises/hearing/data/THOMAS/0354 b/modular/shell/exercises/hearing/data/THOMAS/0354
new file mode 100644 (file)
index 0000000..39b6805
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/THOMAS/0354
@@ -0,0 +1,9 @@
+# 
+Reported: Sat May 14 08:58:18 2011
+Subject: jayBackstreet283
+Year/month of birth: 1993/02
+Sex: M
+CI type: 5
+Volume: 1
+Range: 4
+Discrimination: 5

diff --git a/modular/shell/exercises/hearing/data/THOMAS/0358 b/modular/shell/exercises/hearing/data/THOMAS/0358
new file mode 100644 (file)
index 0000000..d34a58e
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/THOMAS/0358
@@ -0,0 +1,9 @@
+# 
+Reported: Sun Jun 26 08:15:24 2011
+Subject: scaryBroccoli287
+Year/month of birth: 1994/10
+Sex: M
+CI type: 3
+Volume: 3
+Range: 7
+Discrimination: 1

diff --git a/modular/shell/exercises/hearing/data/THOMAS/0369 b/modular/shell/exercises/hearing/data/THOMAS/0369
new file mode 100644 (file)
index 0000000..8e961ac
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/THOMAS/0369
@@ -0,0 +1,9 @@
+# 
+Reported: Wed May 18 10:35:09 2011
+Subject: babyBroccoli298
+Year/month of birth: 1999/03
+Sex: N
+CI type: 4
+Volume: 1
+Range: 9
+Discrimination: 4

diff --git a/modular/shell/exercises/hearing/data/THOMAS/0373 b/modular/shell/exercises/hearing/data/THOMAS/0373
new file mode 100644 (file)
index 0000000..bacf3dc
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/THOMAS/0373
@@ -0,0 +1,9 @@
+# 
+Reported: Tue Sep 20 12:09:15 2011
+Subject: beyonceCarrot302
+Year/month of birth: 1997/06
+Sex: N
+CI type: 4
+Volume: 8
+Range: 6
+Discrimination: 6

diff --git a/modular/shell/exercises/hearing/data/THOMAS/0376 b/modular/shell/exercises/hearing/data/THOMAS/0376
new file mode 100644 (file)
index 0000000..f1982a7
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/THOMAS/0376
@@ -0,0 +1,9 @@
+# 
+Reported: Thu Aug 4 14:45:40 2011
+Subject: beyonceJonas304
+Year/month of birth: 1995/11
+Sex: F
+CI type: 16
+Volume: 5
+Range: 5
+Discrimination: 6

diff --git a/modular/shell/exercises/hearing/data/THOMAS/0391 b/modular/shell/exercises/hearing/data/THOMAS/0391
new file mode 100644 (file)
index 0000000..28ad1c9
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/THOMAS/0391
@@ -0,0 +1,9 @@
+# 
+Reported: Sun Aug 14 09:34:36 2011
+Subject: madonnaStarr315
+Year/month of birth: 1994/09
+Sex: F
+CI type: 21
+Volume: 8
+Range: 6
+Discrimination: 6

diff --git a/modular/shell/exercises/hearing/data/THOMAS/0396 b/modular/shell/exercises/hearing/data/THOMAS/0396
new file mode 100644 (file)
index 0000000..afdd859
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/THOMAS/0396
@@ -0,0 +1,9 @@
+# 
+Reported: Fri Aug 26 14:59:45 2011
+Subject: madonnaBroccoli319
+Year/month of birth: 1999/06
+Sex: F
+CI type: 10
+Volume: 7
+Range: 9
+Discrimination: 7

diff --git a/modular/shell/exercises/hearing/data/THOMAS/0399 b/modular/shell/exercises/hearing/data/THOMAS/0399
new file mode 100644 (file)
index 0000000..ed46e68
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/THOMAS/0399
@@ -0,0 +1,9 @@
+# 
+Reported: Sat Jul 16 11:06:21 2011
+Subject: princeHarrison322
+Year/month of birth: 1998/01
+Sex: F
+CI type: 6
+Volume: 3
+Range: 4
+Discrimination: 7

diff --git a/modular/shell/exercises/hearing/data/THOMAS/0406 b/modular/shell/exercises/hearing/data/THOMAS/0406
new file mode 100644 (file)
index 0000000..505d701
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/THOMAS/0406
@@ -0,0 +1,9 @@
+# 
+Reported: Sun Aug 21 10:01:29 2011
+Subject: princeBackstreet327
+Year/month of birth: 1993/11
+Sex: M
+CI type: 21
+Volume: 10
+Range: 9
+Discrimination: 3

diff --git a/modular/shell/exercises/hearing/data/THOMAS/0425 b/modular/shell/exercises/hearing/data/THOMAS/0425
new file mode 100644 (file)
index 0000000..2d000a1
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/THOMAS/0425
@@ -0,0 +1,9 @@
+# 
+Reported: Tue Aug 30 08:15:42 2011
+Subject: poshZ341
+Year/month of birth: 1994/04
+Sex: F
+CI type: 14
+Volume: 5
+Range: 7
+Discrimination: 3

diff --git a/modular/shell/exercises/hearing/data/THOMAS/0431 b/modular/shell/exercises/hearing/data/THOMAS/0431
new file mode 100644 (file)
index 0000000..3578f7f
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/THOMAS/0431
@@ -0,0 +1,9 @@
+# 
+Reported: Thu Jul 28 11:38:24 2011
+Subject: beyonceSpice347
+Year/month of birth: 1997/02
+Sex: F
+CI type: 10
+Volume: 2
+Range: 9
+Discrimination: 3

diff --git a/modular/shell/exercises/hearing/data/THOMAS/0432 b/modular/shell/exercises/hearing/data/THOMAS/0432
new file mode 100644 (file)
index 0000000..0fc87a3
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/THOMAS/0432
@@ -0,0 +1,9 @@
+# 
+Reported: Wed Jul 20 09:59:38 2011
+Subject: madonnaBeet348
+Year/month of birth: 1993/07
+Sex: N
+CI type: 17
+Volume: 4
+Range: 6
+Discrimination: 9

diff --git a/modular/shell/exercises/hearing/data/THOMAS/0435 b/modular/shell/exercises/hearing/data/THOMAS/0435
new file mode 100644 (file)
index 0000000..51b8574
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/THOMAS/0435
@@ -0,0 +1,9 @@
+# 
+Reported: Wed Sep 7 10:51:36 2011
+Subject: robynSpice349
+Year/month of birth: 1997/10
+Sex: M
+CI type: 19
+Volume: 7
+Range: 8
+Discrimination: 9

diff --git a/modular/shell/exercises/hearing/data/THOMAS/0438 b/modular/shell/exercises/hearing/data/THOMAS/0438
new file mode 100644 (file)
index 0000000..d4b7fe6
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/THOMAS/0438
@@ -0,0 +1,9 @@
+# 
+Reported: Tue Aug 2 15:05:01 2011
+Subject: robynBeatle351
+Year/month of birth: 1997/02
+Sex: M
+CI type: 25
+Volume: 6
+Range: 9
+Discrimination: 9

diff --git a/modular/shell/exercises/hearing/data/THOMAS/0448 b/modular/shell/exercises/hearing/data/THOMAS/0448
new file mode 100644 (file)
index 0000000..097141f
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/THOMAS/0448
@@ -0,0 +1,9 @@
+# 
+Reported: Wed Sep 28 14:01:36 2011
+Subject: johnAsparagus357
+Year/month of birth: 1996/01
+Sex: F
+CI type: 23
+Volume: 8
+Range: 9
+Discrimination: 10

diff --git a/modular/shell/exercises/hearing/data/THOMAS/0450 b/modular/shell/exercises/hearing/data/THOMAS/0450
new file mode 100644 (file)
index 0000000..6540a8b
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/THOMAS/0450
@@ -0,0 +1,9 @@
+# 
+Reported: Thu Jul 28 14:33:15 2011
+Subject: georgeCarrot359
+Year/month of birth: 1996/05
+Sex: M
+CI type: 24
+Volume: 5
+Range: 2
+Discrimination: 6

diff --git a/modular/shell/exercises/hearing/data/THOMAS/0464 b/modular/shell/exercises/hearing/data/THOMAS/0464
new file mode 100644 (file)
index 0000000..9847561
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/THOMAS/0464
@@ -0,0 +1,9 @@
+# 
+Reported: Sat May 28 14:35:47 2011
+Subject: georgeHarrison372
+Year/month of birth: 1995/08
+Sex: N
+CI type: 10
+Volume: 6
+Range: 2
+Discrimination: 3

diff --git a/modular/shell/exercises/hearing/data/THOMAS/0465 b/modular/shell/exercises/hearing/data/THOMAS/0465
new file mode 100644 (file)
index 0000000..de07d23
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/THOMAS/0465
@@ -0,0 +1,9 @@
+# 
+Reported: Sat Aug 13 14:48:40 2011
+Subject: georgeBackstreet373
+Year/month of birth: 1992/07
+Sex: F
+CI type: 23
+Volume: 3
+Range: 4
+Discrimination: 8

diff --git a/modular/shell/exercises/hearing/data/THOMAS/0467 b/modular/shell/exercises/hearing/data/THOMAS/0467
new file mode 100644 (file)
index 0000000..b488ca8
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/THOMAS/0467
@@ -0,0 +1,9 @@
+# 
+Reported: Sat Sep 10 12:55:17 2011
+Subject: poshSync375
+Year/month of birth: 1991/06
+Sex: F
+CI type: 14
+Volume: 3
+Range: 6
+Discrimination: 7

diff --git a/modular/shell/exercises/hearing/data/THOMAS/0481 b/modular/shell/exercises/hearing/data/THOMAS/0481
new file mode 100644 (file)
index 0000000..8949559
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/THOMAS/0481
@@ -0,0 +1,9 @@
+# 
+Reported: Tue Jun 21 12:23:40 2011
+Subject: jayBroccoli389
+Year/month of birth: 1999/12
+Sex: F
+CI type: 16
+Volume: 3
+Range: 9
+Discrimination: 8

diff --git a/modular/shell/exercises/hearing/data/THOMAS/0482 b/modular/shell/exercises/hearing/data/THOMAS/0482
new file mode 100644 (file)
index 0000000..bac0e18
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/THOMAS/0482
@@ -0,0 +1,9 @@
+# 
+Reported: Mon May 16 15:11:14 2011
+Subject: jayBroccoli389
+Year/month of birth: 1999/12
+Sex: F
+CI type: 16
+Volume: 3
+Range: 9
+Discrimination: 8

diff --git a/modular/shell/exercises/hearing/data/THOMAS/0484 b/modular/shell/exercises/hearing/data/THOMAS/0484
new file mode 100644 (file)
index 0000000..f42edfd
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/THOMAS/0484
@@ -0,0 +1,9 @@
+# 
+Reported: Tue May 10 11:10:24 2011
+Subject: jayBroccoli389
+Year/month of birth: 1999/12
+Sex: F
+CI type: 16
+Volume: 4
+Range: 9
+Discrimination: 7

diff --git a/modular/shell/exercises/hearing/data/THOMAS/0485 b/modular/shell/exercises/hearing/data/THOMAS/0485
new file mode 100644 (file)
index 0000000..effeed5
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/THOMAS/0485
@@ -0,0 +1,9 @@
+# 
+Reported: Mon May 2 10:15:40 2011
+Subject: jayBroccoli389
+Year/month of birth: 1999/12
+Sex: F
+CI type: 16
+Volume: 4
+Range: 9
+Discrimination: 6

diff --git a/modular/shell/exercises/hearing/data/THOMAS/0488 b/modular/shell/exercises/hearing/data/THOMAS/0488
new file mode 100644 (file)
index 0000000..91ead54
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/THOMAS/0488
@@ -0,0 +1,9 @@
+# 
+Reported: Wed Jun 22 08:58:50 2011
+Subject: gingerMcCartney390
+Year/month of birth: 1997/07
+Sex: M
+CI type: 8
+Volume: 4
+Range: 5
+Discrimination: 1

diff --git a/modular/shell/exercises/hearing/data/THOMAS/0501 b/modular/shell/exercises/hearing/data/THOMAS/0501
new file mode 100644 (file)
index 0000000..8027f80
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/THOMAS/0501
@@ -0,0 +1,9 @@
+# 
+Reported: Tue Jul 5 08:56:26 2011
+Subject: scaryLennon399
+Year/month of birth: 1999/08
+Sex: F
+CI type: 12
+Volume: 2
+Range: 9
+Discrimination: 7

diff --git a/modular/shell/exercises/hearing/data/THOMAS/0513 b/modular/shell/exercises/hearing/data/THOMAS/0513
new file mode 100644 (file)
index 0000000..4718dd8
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/THOMAS/0513
@@ -0,0 +1,9 @@
+# 
+Reported: Sat Jun 18 08:44:29 2011
+Subject: ringoAsparagus406
+Year/month of birth: 1993/07
+Sex: F
+CI type: 1
+Volume: 6
+Range: 5
+Discrimination: 4

diff --git a/modular/shell/exercises/hearing/data/THOMAS/0514 b/modular/shell/exercises/hearing/data/THOMAS/0514
new file mode 100644 (file)
index 0000000..93eeb22
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/THOMAS/0514
@@ -0,0 +1,9 @@
+# 
+Reported: Tue Jun 14 08:08:50 2011
+Subject: ringoAsparagus406
+Year/month of birth: 1993/07
+Sex: F
+CI type: 1
+Volume: 7
+Range: 5
+Discrimination: 4

diff --git a/modular/shell/exercises/hearing/data/THOMAS/0539 b/modular/shell/exercises/hearing/data/THOMAS/0539
new file mode 100644 (file)
index 0000000..aa8d47a
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/THOMAS/0539
@@ -0,0 +1,9 @@
+# 
+Reported: Fri May 20 13:28:57 2011
+Subject: ringoBeet422
+Year/month of birth: 1999/10
+Sex: M
+CI type: 20
+Volume: 5
+Range: 9
+Discrimination: 6

diff --git a/modular/shell/exercises/hearing/data/THOMAS/0561 b/modular/shell/exercises/hearing/data/THOMAS/0561
new file mode 100644 (file)
index 0000000..8addb49
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/THOMAS/0561
@@ -0,0 +1,9 @@
+# 
+Reported: Tue Jul 12 10:45:09 2011
+Subject: georgeBeatle438
+Year/month of birth: 1997/01
+Sex: F
+CI type: 16
+Volume: 8
+Range: 3
+Discrimination: 6

diff --git a/modular/shell/exercises/hearing/data/alexander/data_216.DATA b/modular/shell/exercises/hearing/data/alexander/data_216.DATA
new file mode 100644 (file)
index 0000000..f12d19b
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/alexander/data_216.DATA
@@ -0,0 +1,9 @@
+# 
+Reported: Wed Aug 17 13:56:38 2011
+Subject: madonnaStarr178
+Year/month of birth: 1995/02
+Sex: N
+CI type: 8
+Volume: 7
+Range: 3
+Discrimination: 5

diff --git a/modular/shell/exercises/hearing/data/alexander/data_242.DATA b/modular/shell/exercises/hearing/data/alexander/data_242.DATA
new file mode 100644 (file)
index 0000000..11360f0
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/alexander/data_242.DATA
@@ -0,0 +1,9 @@
+# 
+Reported: Thu May 19 09:08:14 2011
+Subject: paulSpice199
+Year/month of birth: 1994/01
+Sex: M
+CI type: 24
+Volume: 4
+Range: 9
+Discrimination: 8

diff --git a/modular/shell/exercises/hearing/data/alexander/data_256.DATA b/modular/shell/exercises/hearing/data/alexander/data_256.DATA
new file mode 100644 (file)
index 0000000..6175955
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/alexander/data_256.DATA
@@ -0,0 +1,9 @@
+# 
+Reported: Fri May 13 09:11:42 2011
+Subject: paulBeet211
+Year/month of birth: 1991/04
+Sex: F
+CI type: 5
+Volume: 4
+Range: 4
+Discrimination: 2

diff --git a/modular/shell/exercises/hearing/data/alexander/data_262.DATA b/modular/shell/exercises/hearing/data/alexander/data_262.DATA
new file mode 100644 (file)
index 0000000..0b9ecab
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/alexander/data_262.DATA
@@ -0,0 +1,9 @@
+# 
+Reported: Tue Sep 6 12:57:43 2011
+Subject: ringoBeet213
+Year/month of birth: 1998/01
+Sex: N
+CI type: 19
+Volume: 6
+Range: 5
+Discrimination: 8

diff --git a/modular/shell/exercises/hearing/data/alexander/data_268.DATA b/modular/shell/exercises/hearing/data/alexander/data_268.DATA
new file mode 100644 (file)
index 0000000..3288681
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/alexander/data_268.DATA
@@ -0,0 +1,9 @@
+# 
+Reported: Fri Jul 8 15:41:01 2011
+Subject: georgeHarrison219
+Year/month of birth: 1998/03
+Sex: F
+CI type: 18
+Volume: 6
+Range: 5
+Discrimination: 5

diff --git a/modular/shell/exercises/hearing/data/alexander/data_277.DATA b/modular/shell/exercises/hearing/data/alexander/data_277.DATA
new file mode 100644 (file)
index 0000000..1fa3d7e
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/alexander/data_277.DATA
@@ -0,0 +1,9 @@
+# 
+Reported: Tue Aug 23 12:41:49 2011
+Subject: beyonceJonas228
+Year/month of birth: 1998/10
+Sex: F
+CI type: 22
+Volume: 6
+Range: 10
+Discrimination: 9

diff --git a/modular/shell/exercises/hearing/data/alexander/data_278.DATA b/modular/shell/exercises/hearing/data/alexander/data_278.DATA
new file mode 100644 (file)
index 0000000..f674af3
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/alexander/data_278.DATA
@@ -0,0 +1,9 @@
+# 
+Reported: Sun Jun 19 09:32:30 2011
+Subject: georgeBeet229
+Year/month of birth: 1996/01
+Sex: M
+CI type: 20
+Volume: 7
+Range: 4
+Discrimination: 5

diff --git a/modular/shell/exercises/hearing/data/alexander/data_288.DATA b/modular/shell/exercises/hearing/data/alexander/data_288.DATA
new file mode 100644 (file)
index 0000000..4ed45c1
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/alexander/data_288.DATA
@@ -0,0 +1,9 @@
+# 
+Reported: Tue Jul 26 15:01:25 2011
+Subject: scaryMcCartney238
+Year/month of birth: 1996/03
+Sex: F
+CI type: 24
+Volume: 3
+Range: 8
+Discrimination: 8

diff --git a/modular/shell/exercises/hearing/data/alexander/data_292.DATA b/modular/shell/exercises/hearing/data/alexander/data_292.DATA
new file mode 100644 (file)
index 0000000..eb109ae
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/alexander/data_292.DATA
@@ -0,0 +1,9 @@
+# 
+Reported: Sun May 29 11:12:13 2011
+Subject: babyJonas240
+Year/month of birth: 1993/03
+Sex: M
+CI type: 3
+Volume: 0
+Range: 9
+Discrimination: 2

diff --git a/modular/shell/exercises/hearing/data/alexander/data_297.DATA b/modular/shell/exercises/hearing/data/alexander/data_297.DATA
new file mode 100644 (file)
index 0000000..1804a6d
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/alexander/data_297.DATA
@@ -0,0 +1,9 @@
+# 
+Reported: Sun Jul 3 11:43:06 2011
+Subject: princeMcCartney241
+Year/month of birth: 1992/01
+Sex: M
+CI type: 25
+Volume: 5
+Range: 4
+Discrimination: 6

diff --git a/modular/shell/exercises/hearing/data/alexander/data_305.DATA b/modular/shell/exercises/hearing/data/alexander/data_305.DATA
new file mode 100644 (file)
index 0000000..3e5cddc
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/alexander/data_305.DATA
@@ -0,0 +1,9 @@
+# 
+Reported: Sat Jul 16 10:40:53 2011
+Subject: scaryBroccoli244
+Year/month of birth: 1997/12
+Sex: F
+CI type: 1
+Volume: 5
+Range: 5
+Discrimination: 6

diff --git a/modular/shell/exercises/hearing/data/alexander/data_306.DATA b/modular/shell/exercises/hearing/data/alexander/data_306.DATA
new file mode 100644 (file)
index 0000000..e5454e9
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/alexander/data_306.DATA
@@ -0,0 +1,9 @@
+# 
+Reported: Fri Sep 9 12:23:59 2011
+Subject: robynSync245
+Year/month of birth: 1999/08
+Sex: M
+CI type: 1
+Volume: 1
+Range: 9
+Discrimination: 6

diff --git a/modular/shell/exercises/hearing/data/alexander/data_309.DATA b/modular/shell/exercises/hearing/data/alexander/data_309.DATA
new file mode 100644 (file)
index 0000000..004d7b8
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/alexander/data_309.DATA
@@ -0,0 +1,9 @@
+# 
+Reported: Tue Aug 23 12:23:45 2011
+Subject: georgeSync248
+Year/month of birth: 1996/12
+Sex: M
+CI type: 11
+Volume: 6
+Range: 8
+Discrimination: 3

diff --git a/modular/shell/exercises/hearing/data/alexander/data_318.DATA b/modular/shell/exercises/hearing/data/alexander/data_318.DATA
new file mode 100644 (file)
index 0000000..37b3eea
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/alexander/data_318.DATA
@@ -0,0 +1,9 @@
+# 
+Reported: Sat Sep 10 11:44:27 2011
+Subject: gingerSpice253
+Year/month of birth: 1996/10
+Sex: F
+CI type: 20
+Volume: 8
+Range: 7
+Discrimination: 6

diff --git a/modular/shell/exercises/hearing/data/alexander/data_337.DATA b/modular/shell/exercises/hearing/data/alexander/data_337.DATA
new file mode 100644 (file)
index 0000000..d2f2eb2
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/alexander/data_337.DATA
@@ -0,0 +1,9 @@
+# 
+Reported: Thu Sep 22 10:16:46 2011
+Subject: ringoSpice271
+Year/month of birth: 1998/11
+Sex: F
+CI type: 22
+Volume: 7
+Range: 3
+Discrimination: 8

diff --git a/modular/shell/exercises/hearing/data/alexander/data_339.DATA b/modular/shell/exercises/hearing/data/alexander/data_339.DATA
new file mode 100644 (file)
index 0000000..3d27785
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/alexander/data_339.DATA
@@ -0,0 +1,9 @@
+# 
+Reported: Fri Jul 15 16:17:33 2011
+Subject: princeHarrison273
+Year/month of birth: 1995/03
+Sex: F
+CI type: 2
+Volume: 4
+Range: 2
+Discrimination: 2

diff --git a/modular/shell/exercises/hearing/data/alexander/data_344.DATA b/modular/shell/exercises/hearing/data/alexander/data_344.DATA
new file mode 100644 (file)
index 0000000..3beb92e
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/alexander/data_344.DATA
@@ -0,0 +1,9 @@
+# 
+Reported: Tue Jul 12 13:31:34 2011
+Subject: madonnaAsparagus274
+Year/month of birth: 1999/04
+Sex: M
+CI type: 10
+Volume: 3
+Range: 8
+Discrimination: 5

diff --git a/modular/shell/exercises/hearing/data/alexander/data_346.DATA b/modular/shell/exercises/hearing/data/alexander/data_346.DATA
new file mode 100644 (file)
index 0000000..a01f1de
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/alexander/data_346.DATA
@@ -0,0 +1,9 @@
+# 
+Reported: Fri May 27 08:08:06 2011
+Subject: scaryStarr276
+Year/month of birth: 1991/01
+Sex: F
+CI type: 15
+Volume: 2
+Range: 4
+Discrimination: 6

diff --git a/modular/shell/exercises/hearing/data/alexander/data_347.DATA b/modular/shell/exercises/hearing/data/alexander/data_347.DATA
new file mode 100644 (file)
index 0000000..d630799
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/alexander/data_347.DATA
@@ -0,0 +1,9 @@
+# 
+Reported: Sat May 28 08:24:36 2011
+Subject: paulBroccoli277
+Year/month of birth: 1993/07
+Sex: F
+CI type: 13
+Volume: 8
+Range: 3
+Discrimination: 3

diff --git a/modular/shell/exercises/hearing/data/alexander/data_357.DATA b/modular/shell/exercises/hearing/data/alexander/data_357.DATA
new file mode 100644 (file)
index 0000000..36c7c5e
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/alexander/data_357.DATA
@@ -0,0 +1,9 @@
+# 
+Reported: Mon Jul 4 12:09:44 2011
+Subject: jayBeet286
+Year/month of birth: 1992/12
+Sex: N
+CI type: 1
+Volume: 2
+Range: 9
+Discrimination: 2

diff --git a/modular/shell/exercises/hearing/data/alexander/data_364.DATA b/modular/shell/exercises/hearing/data/alexander/data_364.DATA
new file mode 100644 (file)
index 0000000..928bdd8
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/alexander/data_364.DATA
@@ -0,0 +1,9 @@
+# 
+Reported: Sat Jun 25 13:37:57 2011
+Subject: georgeSpice293
+Year/month of birth: 1995/10
+Sex: N
+CI type: 12
+Volume: 3
+Range: 7
+Discrimination: 1

diff --git a/modular/shell/exercises/hearing/data/alexander/data_379.DATA b/modular/shell/exercises/hearing/data/alexander/data_379.DATA
new file mode 100644 (file)
index 0000000..813422c
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/alexander/data_379.DATA
@@ -0,0 +1,9 @@
+# 
+Reported: Mon Jul 4 10:58:58 2011
+Subject: ringoSync305
+Year/month of birth: 1999/07
+Sex: M
+CI type: 17
+Volume: 3
+Range: 9
+Discrimination: 3

diff --git a/modular/shell/exercises/hearing/data/alexander/data_387.DATA b/modular/shell/exercises/hearing/data/alexander/data_387.DATA
new file mode 100644 (file)
index 0000000..1362305
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/alexander/data_387.DATA
@@ -0,0 +1,9 @@
+# 
+Reported: Wed Jul 20 14:25:09 2011
+Subject: beyonceCarrot311
+Year/month of birth: 1994/03
+Sex: N
+CI type: 14
+Volume: 4
+Range: 4
+Discrimination: 5

diff --git a/modular/shell/exercises/hearing/data/alexander/data_389.DATA b/modular/shell/exercises/hearing/data/alexander/data_389.DATA
new file mode 100644 (file)
index 0000000..d181287
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/alexander/data_389.DATA
@@ -0,0 +1,9 @@
+# 
+Reported: Thu Aug 18 14:36:01 2011
+Subject: beyonceLennon313
+Year/month of birth: 1998/07
+Sex: F
+CI type: 12
+Volume: 7
+Range: 6
+Discrimination: 7

diff --git a/modular/shell/exercises/hearing/data/alexander/data_397.DATA b/modular/shell/exercises/hearing/data/alexander/data_397.DATA
new file mode 100644 (file)
index 0000000..0f8cdb8
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/alexander/data_397.DATA
@@ -0,0 +1,9 @@
+# 
+Reported: Fri May 27 11:30:48 2011
+Subject: robynCarrot320
+Year/month of birth: 1996/08
+Sex: M
+CI type: 21
+Volume: 9
+Range: 9
+Discrimination: 6

diff --git a/modular/shell/exercises/hearing/data/alexander/data_402.DATA b/modular/shell/exercises/hearing/data/alexander/data_402.DATA
new file mode 100644 (file)
index 0000000..ad4a816
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/alexander/data_402.DATA
@@ -0,0 +1,9 @@
+# 
+Reported: Sat Jul 30 12:31:51 2011
+Subject: scaryJonas325
+Year/month of birth: 1995/11
+Sex: N
+CI type: 25
+Volume: 6
+Range: 6
+Discrimination: 4

diff --git a/modular/shell/exercises/hearing/data/alexander/data_408.DATA b/modular/shell/exercises/hearing/data/alexander/data_408.DATA
new file mode 100644 (file)
index 0000000..45c0ad9
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/alexander/data_408.DATA
@@ -0,0 +1,9 @@
+# 
+Reported: Mon Sep 26 11:48:42 2011
+Subject: madonnaHarrison329
+Year/month of birth: 1998/09
+Sex: M
+CI type: 8
+Volume: 3
+Range: 4
+Discrimination: 6

diff --git a/modular/shell/exercises/hearing/data/alexander/data_415.DATA b/modular/shell/exercises/hearing/data/alexander/data_415.DATA
new file mode 100644 (file)
index 0000000..dce36a9
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/alexander/data_415.DATA
@@ -0,0 +1,9 @@
+# 
+Reported: Tue Jun 7 16:21:41 2011
+Subject: princeAsparagus333
+Year/month of birth: 1996/10
+Sex: M
+CI type: 17
+Volume: 4
+Range: 7
+Discrimination: 6

diff --git a/modular/shell/exercises/hearing/data/alexander/data_420.DATA b/modular/shell/exercises/hearing/data/alexander/data_420.DATA
new file mode 100644 (file)
index 0000000..a6f950a
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/alexander/data_420.DATA
@@ -0,0 +1,9 @@
+# 
+Reported: Fri Aug 26 09:44:02 2011
+Subject: johnBeatle336
+Year/month of birth: 1997/05
+Sex: F
+CI type: 11
+Volume: 8
+Range: 9
+Discrimination: 7

diff --git a/modular/shell/exercises/hearing/data/alexander/data_421.DATA b/modular/shell/exercises/hearing/data/alexander/data_421.DATA
new file mode 100644 (file)
index 0000000..7f6eeb1
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/alexander/data_421.DATA
@@ -0,0 +1,9 @@
+# 
+Reported: Tue May 3 15:31:05 2011
+Subject: scaryCarrot337
+Year/month of birth: 1998/09
+Sex: F
+CI type: 21
+Volume: 4
+Range: 2
+Discrimination: 5

diff --git a/modular/shell/exercises/hearing/data/alexander/data_427.DATA b/modular/shell/exercises/hearing/data/alexander/data_427.DATA
new file mode 100644 (file)
index 0000000..4040abe
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/alexander/data_427.DATA
@@ -0,0 +1,9 @@
+# 
+Reported: Tue Jun 28 15:19:14 2011
+Subject: babyBeatle343
+Year/month of birth: 1991/11
+Sex: N
+CI type: 10
+Volume: 7
+Range: 9
+Discrimination: 3

diff --git a/modular/shell/exercises/hearing/data/alexander/data_434.DATA b/modular/shell/exercises/hearing/data/alexander/data_434.DATA
new file mode 100644 (file)
index 0000000..9524771
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/alexander/data_434.DATA
@@ -0,0 +1,9 @@
+# 
+Reported: Fri May 6 13:45:16 2011
+Subject: robynSpice349
+Year/month of birth: 1997/10
+Sex: M
+CI type: 19
+Volume: 4
+Range: 7
+Discrimination: 8

diff --git a/modular/shell/exercises/hearing/data/alexander/data_454.DATA b/modular/shell/exercises/hearing/data/alexander/data_454.DATA
new file mode 100644 (file)
index 0000000..a7c61ca
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/alexander/data_454.DATA
@@ -0,0 +1,9 @@
+# 
+Reported: Mon Jul 18 09:19:13 2011
+Subject: paulBeet363
+Year/month of birth: 1997/09
+Sex: F
+CI type: 21
+Volume: 5
+Range: 7
+Discrimination: 8

diff --git a/modular/shell/exercises/hearing/data/alexander/data_462.DATA b/modular/shell/exercises/hearing/data/alexander/data_462.DATA
new file mode 100644 (file)
index 0000000..275fa00
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/alexander/data_462.DATA
@@ -0,0 +1,9 @@
+# 
+Reported: Thu Sep 8 12:04:36 2011
+Subject: gingerBeet371
+Year/month of birth: 1994/12
+Sex: M
+CI type: 19
+Volume: 3
+Range: 10
+Discrimination: 6

diff --git a/modular/shell/exercises/hearing/data/alexander/data_469.DATA b/modular/shell/exercises/hearing/data/alexander/data_469.DATA
new file mode 100644 (file)
index 0000000..09222db
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/alexander/data_469.DATA
@@ -0,0 +1,9 @@
+# 
+Reported: Sat Aug 6 08:59:11 2011
+Subject: poshLennon377
+Year/month of birth: 1993/03
+Sex: N
+CI type: 16
+Volume: 4
+Range: 5
+Discrimination: 7

diff --git a/modular/shell/exercises/hearing/data/alexander/data_471.DATA b/modular/shell/exercises/hearing/data/alexander/data_471.DATA
new file mode 100644 (file)
index 0000000..b33be35
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/alexander/data_471.DATA
@@ -0,0 +1,9 @@
+# 
+Reported: Tue Aug 30 16:56:43 2011
+Subject: beyonceLennon379
+Year/month of birth: 1999/02
+Sex: F
+CI type: 4
+Volume: 6
+Range: 7
+Discrimination: 4

diff --git a/modular/shell/exercises/hearing/data/alexander/data_473.DATA b/modular/shell/exercises/hearing/data/alexander/data_473.DATA
new file mode 100644 (file)
index 0000000..4f615a3
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/alexander/data_473.DATA
@@ -0,0 +1,9 @@
+# 
+Reported: Tue Aug 9 11:39:55 2011
+Subject: johnMcCartney381
+Year/month of birth: 1999/12
+Sex: M
+CI type: 14
+Volume: 1
+Range: 8
+Discrimination: 8

diff --git a/modular/shell/exercises/hearing/data/alexander/data_498.DATA b/modular/shell/exercises/hearing/data/alexander/data_498.DATA
new file mode 100644 (file)
index 0000000..d24fcf6
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/alexander/data_498.DATA
@@ -0,0 +1,9 @@
+# 
+Reported: Sun Aug 7 13:15:25 2011
+Subject: scaryStarr398
+Year/month of birth: 1992/03
+Sex: M
+CI type: 12
+Volume: 6
+Range: 7
+Discrimination: 6

diff --git a/modular/shell/exercises/hearing/data/alexander/data_502.DATA b/modular/shell/exercises/hearing/data/alexander/data_502.DATA
new file mode 100644 (file)
index 0000000..7c95653
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/alexander/data_502.DATA
@@ -0,0 +1,9 @@
+# 
+Reported: Sat Jul 16 15:25:11 2011
+Subject: scaryLennon399
+Year/month of birth: 1999/08
+Sex: F
+CI type: 12
+Volume: 4
+Range: 9
+Discrimination: 6

diff --git a/modular/shell/exercises/hearing/data/alexander/data_516.DATA b/modular/shell/exercises/hearing/data/alexander/data_516.DATA
new file mode 100644 (file)
index 0000000..efd0b78
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/alexander/data_516.DATA
@@ -0,0 +1,9 @@
+# 
+Reported: Sun May 1 09:04:32 2011
+Subject: madonnaLennon408
+Year/month of birth: 1995/03
+Sex: M
+CI type: 21
+Volume: 8
+Range: 6
+Discrimination: 5

diff --git a/modular/shell/exercises/hearing/data/alexander/data_527.DATA b/modular/shell/exercises/hearing/data/alexander/data_527.DATA
new file mode 100644 (file)
index 0000000..943a83f
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/alexander/data_527.DATA
@@ -0,0 +1,9 @@
+# 
+Reported: Sat Aug 13 15:03:55 2011
+Subject: scaryLennon414
+Year/month of birth: 1996/02
+Sex: N
+CI type: 18
+Volume: 4
+Range: 9
+Discrimination: 7

diff --git a/modular/shell/exercises/hearing/data/alexander/data_530.DATA b/modular/shell/exercises/hearing/data/alexander/data_530.DATA
new file mode 100644 (file)
index 0000000..770c464
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/alexander/data_530.DATA
@@ -0,0 +1,9 @@
+# 
+Reported: Fri Aug 19 10:47:35 2011
+Subject: gingerSpice416
+Year/month of birth: 1993/12
+Sex: M
+CI type: 19
+Volume: 4
+Range: 6
+Discrimination: 8

diff --git a/modular/shell/exercises/hearing/data/alexander/data_536.DATA b/modular/shell/exercises/hearing/data/alexander/data_536.DATA
new file mode 100644 (file)
index 0000000..5d7682a
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/alexander/data_536.DATA
@@ -0,0 +1,9 @@
+# 
+Reported: Tue Jun 14 09:01:29 2011
+Subject: jaySync420
+Year/month of birth: 1998/02
+Sex: N
+CI type: 18
+Volume: 8
+Range: 7
+Discrimination: 4

diff --git a/modular/shell/exercises/hearing/data/alexander/data_542.DATA b/modular/shell/exercises/hearing/data/alexander/data_542.DATA
new file mode 100644 (file)
index 0000000..654bd3c
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/alexander/data_542.DATA
@@ -0,0 +1,9 @@
+# 
+Reported: Mon Aug 1 10:28:48 2011
+Subject: ringoBeet422
+Year/month of birth: 1999/10
+Sex: M
+CI type: 20
+Volume: 6
+Range: 7
+Discrimination: 

diff --git a/modular/shell/exercises/hearing/data/alexander/data_546.DATA b/modular/shell/exercises/hearing/data/alexander/data_546.DATA
new file mode 100644 (file)
index 0000000..dd9a99f
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/alexander/data_546.DATA
@@ -0,0 +1,9 @@
+# 
+Reported: Thu Sep 29 15:43:02 2011
+Subject: scaryLennon426
+Year/month of birth: 1995/09
+Sex: F
+CI type: 18
+Volume: 9
+Range: 9
+Discrimination: 

diff --git a/modular/shell/exercises/hearing/data/alexander/data_547.DATA b/modular/shell/exercises/hearing/data/alexander/data_547.DATA
new file mode 100644 (file)
index 0000000..ca44575
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/alexander/data_547.DATA
@@ -0,0 +1,9 @@
+# 
+Reported: Mon Sep 5 09:56:05 2011
+Subject: madonnaBroccoli427
+Year/month of birth: 1999/12
+Sex: N
+CI type: 20
+Volume: 4
+Range: 9
+Discrimination: 5

diff --git a/modular/shell/exercises/hearing/data/alexander/data_548.DATA b/modular/shell/exercises/hearing/data/alexander/data_548.DATA
new file mode 100644 (file)
index 0000000..9c29721
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/alexander/data_548.DATA
@@ -0,0 +1,9 @@
+# 
+Reported: Sat Sep 17 08:52:44 2011
+Subject: beyonceLennon428
+Year/month of birth: 1992/08
+Sex: N
+CI type: 17
+Volume: 3
+Range: 6
+Discrimination: 6

diff --git a/modular/shell/exercises/hearing/data/alexander/data_550.DATA b/modular/shell/exercises/hearing/data/alexander/data_550.DATA
new file mode 100644 (file)
index 0000000..4601420
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/alexander/data_550.DATA
@@ -0,0 +1,9 @@
+# 
+Reported: Mon May 23 14:24:45 2011
+Subject: poshSpice430
+Year/month of birth: 1999/05
+Sex: F
+CI type: 22
+Volume: 6
+Range: 8
+Discrimination: 8

diff --git a/modular/shell/exercises/hearing/data/alexander/data_560.DATA b/modular/shell/exercises/hearing/data/alexander/data_560.DATA
new file mode 100644 (file)
index 0000000..61b1bc2
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/alexander/data_560.DATA
@@ -0,0 +1,9 @@
+# 
+Reported: Sat May 7 10:50:03 2011
+Subject: georgeSpice437
+Year/month of birth: 1997/12
+Sex: M
+CI type: 20
+Volume: 3
+Range: 5
+Discrimination: 

diff --git a/modular/shell/exercises/hearing/data/gerdal/Data0211 b/modular/shell/exercises/hearing/data/gerdal/Data0211
new file mode 100644 (file)
index 0000000..8c9564e
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/gerdal/Data0211
@@ -0,0 +1,9 @@
+# 
+Reported: Mon Jun 6 15:49:15 2011
+Subject: robynSync173
+Year/month of birth: 1997/09
+Sex: M
+CI type: 9
+Volume: 3
+Range: 9
+Discrimination: 5

diff --git a/modular/shell/exercises/hearing/data/gerdal/Data0218 b/modular/shell/exercises/hearing/data/gerdal/Data0218
new file mode 100644 (file)
index 0000000..0d8b656
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/gerdal/Data0218
@@ -0,0 +1,9 @@
+# 
+Reported: Thu Jun 23 15:25:05 2011
+Subject: madonnaSpice180
+Year/month of birth: 1994/01
+Sex: N
+CI type: 23
+Volume: 6
+Range: 7
+Discrimination: 3

diff --git a/modular/shell/exercises/hearing/data/gerdal/Data0220 b/modular/shell/exercises/hearing/data/gerdal/Data0220
new file mode 100644 (file)
index 0000000..6f4548f
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/gerdal/Data0220
@@ -0,0 +1,9 @@
+# 
+Reported: Sun May 1 11:48:13 2011
+Subject: georgeAsparagus182
+Year/month of birth: 1994/05
+Sex: N
+CI type: 18
+Volume: 3
+Range: 6
+Discrimination: 4

diff --git a/modular/shell/exercises/hearing/data/gerdal/Data0227 b/modular/shell/exercises/hearing/data/gerdal/Data0227
new file mode 100644 (file)
index 0000000..e96ce9a
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/gerdal/Data0227
@@ -0,0 +1,9 @@
+# 
+Reported: Thu Jul 28 16:26:05 2011
+Subject: poshJonas189
+Year/month of birth: 1998/10
+Sex: M
+CI type: 18
+Volume: 2
+Range: 7
+Discrimination: 5

diff --git a/modular/shell/exercises/hearing/data/gerdal/Data0229 b/modular/shell/exercises/hearing/data/gerdal/Data0229
new file mode 100644 (file)
index 0000000..c4a9152
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/gerdal/Data0229
@@ -0,0 +1,9 @@
+# 
+Reported: Sat Sep 17 09:08:21 2011
+Subject: scaryAsparagus190
+Year/month of birth: 1991/10
+Sex: F
+CI type: 20
+Volume: 10
+Range: 2
+Discrimination: 7

diff --git a/modular/shell/exercises/hearing/data/gerdal/Data0230 b/modular/shell/exercises/hearing/data/gerdal/Data0230
new file mode 100644 (file)
index 0000000..1d6bc70
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/gerdal/Data0230
@@ -0,0 +1,9 @@
+# 
+Reported: Fri Jun 3 11:58:55 2011
+Subject: madonnaBeatle191
+Year/month of birth: 1992/08
+Sex: N
+CI type: 11
+Volume: 6
+Range: 6
+Discrimination: 6

diff --git a/modular/shell/exercises/hearing/data/gerdal/Data0232 b/modular/shell/exercises/hearing/data/gerdal/Data0232
new file mode 100644 (file)
index 0000000..bd20798
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/gerdal/Data0232
@@ -0,0 +1,9 @@
+# 
+Reported: Sun Jul 3 10:17:15 2011
+Subject: scarySync192
+Year/month of birth: 1997/02
+Sex: N
+CI type: 6
+Volume: 6
+Range: 7
+Discrimination: 3

diff --git a/modular/shell/exercises/hearing/data/gerdal/Data0238 b/modular/shell/exercises/hearing/data/gerdal/Data0238
new file mode 100644 (file)
index 0000000..ffa44ae
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/gerdal/Data0238
@@ -0,0 +1,9 @@
+# 
+Reported: Fri Jun 3 10:35:41 2011
+Subject: gingerZ196
+Year/month of birth: 1992/09
+Sex: M
+CI type: 6
+Volume: 1
+Range: 6
+Discrimination: 3

diff --git a/modular/shell/exercises/hearing/data/gerdal/Data0240 b/modular/shell/exercises/hearing/data/gerdal/Data0240
new file mode 100644 (file)
index 0000000..6a2abae
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/gerdal/Data0240
@@ -0,0 +1,9 @@
+# 
+Reported: Fri Jul 15 16:56:22 2011
+Subject: johnBackstreet198
+Year/month of birth: 1996/06
+Sex: F
+CI type: 6
+Volume: 3
+Range: 7
+Discrimination: 3

diff --git a/modular/shell/exercises/hearing/data/gerdal/Data0243 b/modular/shell/exercises/hearing/data/gerdal/Data0243
new file mode 100644 (file)
index 0000000..b8fff40
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/gerdal/Data0243
@@ -0,0 +1,9 @@
+# 
+Reported: Wed Sep 14 12:04:14 2011
+Subject: paulSpice199
+Year/month of birth: 1994/01
+Sex: M
+CI type: 24
+Volume: 6
+Range: 10
+Discrimination: 10

diff --git a/modular/shell/exercises/hearing/data/gerdal/Data0245 b/modular/shell/exercises/hearing/data/gerdal/Data0245
new file mode 100644 (file)
index 0000000..b91c95c
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/gerdal/Data0245
@@ -0,0 +1,9 @@
+# 
+Reported: Fri Jul 1 13:46:35 2011
+Subject: babyHarrison201
+Year/month of birth: 1999/05
+Sex: F
+CI type: 3
+Volume: 5
+Range: 9
+Discrimination: 5

diff --git a/modular/shell/exercises/hearing/data/gerdal/Data0250 b/modular/shell/exercises/hearing/data/gerdal/Data0250
new file mode 100644 (file)
index 0000000..55808e5
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/gerdal/Data0250
@@ -0,0 +1,9 @@
+# 
+Reported: Sat Aug 6 08:47:43 2011
+Subject: poshHarrison205
+Year/month of birth: 1997/03
+Sex: F
+CI type: 3
+Volume: 3
+Range: 2
+Discrimination: 4

diff --git a/modular/shell/exercises/hearing/data/gerdal/Data0257 b/modular/shell/exercises/hearing/data/gerdal/Data0257
new file mode 100644 (file)
index 0000000..b14d2fb
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/gerdal/Data0257
@@ -0,0 +1,9 @@
+# 
+Reported: Thu May 26 08:31:36 2011
+Subject: paulBroccoli212
+Year/month of birth: 1997/10
+Sex: F
+CI type: 1
+Volume: 3
+Range: 7
+Discrimination: 3

diff --git a/modular/shell/exercises/hearing/data/gerdal/Data0263 b/modular/shell/exercises/hearing/data/gerdal/Data0263
new file mode 100644 (file)
index 0000000..89c125e
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/gerdal/Data0263
@@ -0,0 +1,9 @@
+# 
+Reported: Wed Jun 22 09:04:09 2011
+Subject: gingerSpice214
+Year/month of birth: 1998/03
+Sex: N
+CI type: 15
+Volume: 4
+Range: 4
+Discrimination: 7

diff --git a/modular/shell/exercises/hearing/data/gerdal/Data0269 b/modular/shell/exercises/hearing/data/gerdal/Data0269
new file mode 100644 (file)
index 0000000..579599a
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/gerdal/Data0269
@@ -0,0 +1,9 @@
+# 
+Reported: Tue Jul 5 08:07:52 2011
+Subject: georgeSync220
+Year/month of birth: 1995/03
+Sex: M
+CI type: 14
+Volume: 5
+Range: 4
+Discrimination: 6

diff --git a/modular/shell/exercises/hearing/data/gerdal/Data0279 b/modular/shell/exercises/hearing/data/gerdal/Data0279
new file mode 100644 (file)
index 0000000..fedff95
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/gerdal/Data0279
@@ -0,0 +1,9 @@
+# 
+Reported: Tue Sep 27 10:34:54 2011
+Subject: johnStarr230
+Year/month of birth: 1992/07
+Sex: N
+CI type: 6
+Volume: 4
+Range: 10
+Discrimination: 6

diff --git a/modular/shell/exercises/hearing/data/gerdal/Data0283 b/modular/shell/exercises/hearing/data/gerdal/Data0283
new file mode 100644 (file)
index 0000000..2ff0445
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/gerdal/Data0283
@@ -0,0 +1,9 @@
+# 
+Reported: Thu May 12 08:22:30 2011
+Subject: princeStarr234
+Year/month of birth: 1995/10
+Sex: F
+CI type: 2
+Volume: 5
+Range: 3
+Discrimination: 1

diff --git a/modular/shell/exercises/hearing/data/gerdal/Data0294 b/modular/shell/exercises/hearing/data/gerdal/Data0294
new file mode 100644 (file)
index 0000000..b33630f
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/gerdal/Data0294
@@ -0,0 +1,9 @@
+# 
+Reported: Mon Jun 6 11:11:27 2011
+Subject: princeMcCartney241
+Year/month of birth: 1992/01
+Sex: M
+CI type: 25
+Volume: 5
+Range: 2
+Discrimination: 6

diff --git a/modular/shell/exercises/hearing/data/gerdal/Data0307 b/modular/shell/exercises/hearing/data/gerdal/Data0307
new file mode 100644 (file)
index 0000000..6595d2a
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/gerdal/Data0307
@@ -0,0 +1,9 @@
+# 
+Reported: Tue Jul 26 13:23:07 2011
+Subject: robynStarr246
+Year/month of birth: 1999/03
+Sex: M
+CI type: 1
+Volume: 6
+Range: 9
+Discrimination: 3

diff --git a/modular/shell/exercises/hearing/data/gerdal/Data0308 b/modular/shell/exercises/hearing/data/gerdal/Data0308
new file mode 100644 (file)
index 0000000..0c41d4d
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/gerdal/Data0308
@@ -0,0 +1,9 @@
+# 
+Reported: Thu Sep 29 09:49:38 2011
+Subject: gingerBackstreet247
+Year/month of birth: 1996/09
+Sex: M
+CI type: 17
+Volume: 5
+Range: 5
+Discrimination: 7

diff --git a/modular/shell/exercises/hearing/data/gerdal/Data0311 b/modular/shell/exercises/hearing/data/gerdal/Data0311
new file mode 100644 (file)
index 0000000..11b2b40
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/gerdal/Data0311
@@ -0,0 +1,9 @@
+# 
+Reported: Sun Jul 10 15:14:14 2011
+Subject: georgeBeet250
+Year/month of birth: 1993/02
+Sex: N
+CI type: 11
+Volume: 8
+Range: 4
+Discrimination: 3

diff --git a/modular/shell/exercises/hearing/data/gerdal/Data0324 b/modular/shell/exercises/hearing/data/gerdal/Data0324
new file mode 100644 (file)
index 0000000..1834c2f
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/gerdal/Data0324
@@ -0,0 +1,9 @@
+# 
+Reported: Thu Jun 9 14:22:12 2011
+Subject: scaryZ259
+Year/month of birth: 1998/05
+Sex: M
+CI type: 7
+Volume: 5
+Range: 4
+Discrimination: 3

diff --git a/modular/shell/exercises/hearing/data/gerdal/Data0331 b/modular/shell/exercises/hearing/data/gerdal/Data0331
new file mode 100644 (file)
index 0000000..90eb829
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/gerdal/Data0331
@@ -0,0 +1,9 @@
+# 
+Reported: Wed Aug 10 10:54:01 2011
+Subject: scaryBeatle265
+Year/month of birth: 1993/04
+Sex: F
+CI type: 6
+Volume: 3
+Range: 4
+Discrimination: 2

diff --git a/modular/shell/exercises/hearing/data/gerdal/Data0338 b/modular/shell/exercises/hearing/data/gerdal/Data0338
new file mode 100644 (file)
index 0000000..df5df12
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/gerdal/Data0338
@@ -0,0 +1,9 @@
+# 
+Reported: Tue Sep 20 16:25:55 2011
+Subject: poshZ272
+Year/month of birth: 1996/12
+Sex: N
+CI type: 3
+Volume: 3
+Range: 5
+Discrimination: 6

diff --git a/modular/shell/exercises/hearing/data/gerdal/Data0342 b/modular/shell/exercises/hearing/data/gerdal/Data0342
new file mode 100644 (file)
index 0000000..5bef1ab
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/gerdal/Data0342
@@ -0,0 +1,9 @@
+# 
+Reported: Wed May 25 09:40:12 2011
+Subject: princeHarrison273
+Year/month of birth: 1995/03
+Sex: F
+CI type: 2
+Volume: 4
+Range: 2
+Discrimination: 2

diff --git a/modular/shell/exercises/hearing/data/gerdal/Data0356 b/modular/shell/exercises/hearing/data/gerdal/Data0356
new file mode 100644 (file)
index 0000000..522f529
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/gerdal/Data0356
@@ -0,0 +1,9 @@
+# 
+Reported: Wed Jun 8 09:40:18 2011
+Subject: madonnaBroccoli285
+Year/month of birth: 1997/11
+Sex: F
+CI type: 24
+Volume: 3
+Range: 8
+Discrimination: 9

diff --git a/modular/shell/exercises/hearing/data/gerdal/Data0365 b/modular/shell/exercises/hearing/data/gerdal/Data0365
new file mode 100644 (file)
index 0000000..0a3deba
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/gerdal/Data0365
@@ -0,0 +1,9 @@
+# 
+Reported: Sat Aug 20 08:31:27 2011
+Subject: scaryLennon294
+Year/month of birth: 1994/10
+Sex: M
+CI type: 23
+Volume: 5
+Range: 9
+Discrimination: 9

diff --git a/modular/shell/exercises/hearing/data/gerdal/Data0367 b/modular/shell/exercises/hearing/data/gerdal/Data0367
new file mode 100644 (file)
index 0000000..5a7a044
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/gerdal/Data0367
@@ -0,0 +1,9 @@
+# 
+Reported: Wed Aug 17 08:15:39 2011
+Subject: beyonceSpice296
+Year/month of birth: 1996/05
+Sex: F
+CI type: 13
+Volume: 3
+Range: 7
+Discrimination: 1

diff --git a/modular/shell/exercises/hearing/data/gerdal/Data0370 b/modular/shell/exercises/hearing/data/gerdal/Data0370
new file mode 100644 (file)
index 0000000..eaf3c3b
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/gerdal/Data0370
@@ -0,0 +1,9 @@
+# 
+Reported: Mon Jun 27 16:24:59 2011
+Subject: georgeLennon299
+Year/month of birth: 1997/10
+Sex: F
+CI type: 1
+Volume: 6
+Range: 5
+Discrimination: 3

diff --git a/modular/shell/exercises/hearing/data/gerdal/Data0407 b/modular/shell/exercises/hearing/data/gerdal/Data0407
new file mode 100644 (file)
index 0000000..9c6aac6
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/gerdal/Data0407
@@ -0,0 +1,9 @@
+# 
+Reported: Sat Sep 10 10:09:39 2011
+Subject: jayBeatle328
+Year/month of birth: 1991/04
+Sex: N
+CI type: 17
+Volume: 6
+Range: 7
+Discrimination: 8

diff --git a/modular/shell/exercises/hearing/data/gerdal/Data0409 b/modular/shell/exercises/hearing/data/gerdal/Data0409
new file mode 100644 (file)
index 0000000..fb91080
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/gerdal/Data0409
@@ -0,0 +1,9 @@
+# 
+Reported: Mon Sep 5 16:07:02 2011
+Subject: ringoSync330
+Year/month of birth: 1998/05
+Sex: M
+CI type: 23
+Volume: 6
+Range: 6
+Discrimination: 5

diff --git a/modular/shell/exercises/hearing/data/gerdal/Data0413 b/modular/shell/exercises/hearing/data/gerdal/Data0413
new file mode 100644 (file)
index 0000000..15b413d
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/gerdal/Data0413
@@ -0,0 +1,9 @@
+# 
+Reported: Thu Jul 21 14:39:03 2011
+Subject: poshHarrison332
+Year/month of birth: 1994/04
+Sex: M
+CI type: 18
+Volume: 4
+Range: 4
+Discrimination: 

diff --git a/modular/shell/exercises/hearing/data/gerdal/Data0414 b/modular/shell/exercises/hearing/data/gerdal/Data0414
new file mode 100644 (file)
index 0000000..ae4ee96
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/gerdal/Data0414
@@ -0,0 +1,9 @@
+# 
+Reported: Thu May 19 12:44:17 2011
+Subject: princeAsparagus333
+Year/month of birth: 1996/10
+Sex: M
+CI type: 17
+Volume: 5
+Range: 8
+Discrimination: 

diff --git a/modular/shell/exercises/hearing/data/gerdal/Data0419 b/modular/shell/exercises/hearing/data/gerdal/Data0419
new file mode 100644 (file)
index 0000000..b804b3b
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/gerdal/Data0419
@@ -0,0 +1,9 @@
+# 
+Reported: Mon Sep 12 14:50:10 2011
+Subject: princeSpice335
+Year/month of birth: 1991/04
+Sex: F
+CI type: 7
+Volume: 1
+Range: 5
+Discrimination: 6

diff --git a/modular/shell/exercises/hearing/data/gerdal/Data0424 b/modular/shell/exercises/hearing/data/gerdal/Data0424
new file mode 100644 (file)
index 0000000..f3aaf51
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/gerdal/Data0424
@@ -0,0 +1,9 @@
+# 
+Reported: Wed Jun 1 12:01:42 2011
+Subject: ringoSpice340
+Year/month of birth: 1992/02
+Sex: N
+CI type: 1
+Volume: 5
+Range: 5
+Discrimination: 3

diff --git a/modular/shell/exercises/hearing/data/gerdal/Data0426 b/modular/shell/exercises/hearing/data/gerdal/Data0426
new file mode 100644 (file)
index 0000000..8a5e833
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/gerdal/Data0426
@@ -0,0 +1,9 @@
+# 
+Reported: Thu Jul 28 10:21:42 2011
+Subject: babyMcCartney342
+Year/month of birth: 1995/05
+Sex: M
+CI type: 16
+Volume: 6
+Range: 4
+Discrimination: 3

diff --git a/modular/shell/exercises/hearing/data/gerdal/Data0446 b/modular/shell/exercises/hearing/data/gerdal/Data0446
new file mode 100644 (file)
index 0000000..d2efc71
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/gerdal/Data0446
@@ -0,0 +1,9 @@
+# 
+Reported: Wed Jun 1 16:22:57 2011
+Subject: gingerBroccoli355
+Year/month of birth: 1991/05
+Sex: M
+CI type: 25
+Volume: 5
+Range: 5
+Discrimination: 5

diff --git a/modular/shell/exercises/hearing/data/gerdal/Data0458 b/modular/shell/exercises/hearing/data/gerdal/Data0458
new file mode 100644 (file)
index 0000000..564f16a
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/gerdal/Data0458
@@ -0,0 +1,9 @@
+# 
+Reported: Sat May 7 14:01:49 2011
+Subject: robynJonas367
+Year/month of birth: 1994/01
+Sex: N
+CI type: 7
+Volume: 3
+Range: 5
+Discrimination: 3

diff --git a/modular/shell/exercises/hearing/data/gerdal/Data0459 b/modular/shell/exercises/hearing/data/gerdal/Data0459
new file mode 100644 (file)
index 0000000..eb12300
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/gerdal/Data0459
@@ -0,0 +1,9 @@
+# 
+Reported: Mon Sep 26 13:19:35 2011
+Subject: robynLennon368
+Year/month of birth: 1993/10
+Sex: M
+CI type: 19
+Volume: 6
+Range: 2
+Discrimination: 8

diff --git a/modular/shell/exercises/hearing/data/gerdal/Data0468 b/modular/shell/exercises/hearing/data/gerdal/Data0468
new file mode 100644 (file)
index 0000000..0519bcb
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/gerdal/Data0468
@@ -0,0 +1,9 @@
+# 
+Reported: Tue Jul 5 08:12:43 2011
+Subject: beyonceJonas376
+Year/month of birth: 1996/10
+Sex: M
+CI type: 24
+Volume: 4
+Range: 6
+Discrimination: 6

diff --git a/modular/shell/exercises/hearing/data/gerdal/Data0486 b/modular/shell/exercises/hearing/data/gerdal/Data0486
new file mode 100644 (file)
index 0000000..628170d
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/gerdal/Data0486
@@ -0,0 +1,9 @@
+# 
+Reported: Fri Aug 19 14:32:40 2011
+Subject: gingerMcCartney390
+Year/month of birth: 1997/07
+Sex: M
+CI type: 8
+Volume: 5
+Range: 7
+Discrimination: 3

diff --git a/modular/shell/exercises/hearing/data/gerdal/Data0487 b/modular/shell/exercises/hearing/data/gerdal/Data0487
new file mode 100644 (file)
index 0000000..1a8b33f
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/gerdal/Data0487
@@ -0,0 +1,9 @@
+# 
+Reported: Mon Aug 1 09:53:38 2011
+Subject: gingerMcCartney390
+Year/month of birth: 1997/07
+Sex: M
+CI type: 8
+Volume: 4
+Range: 4
+Discrimination: 1

diff --git a/modular/shell/exercises/hearing/data/gerdal/Data0495 b/modular/shell/exercises/hearing/data/gerdal/Data0495
new file mode 100644 (file)
index 0000000..bc73b6f
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/gerdal/Data0495
@@ -0,0 +1,9 @@
+# 
+Reported: Thu Jul 28 14:06:20 2011
+Subject: princeBackstreet395
+Year/month of birth: 1993/03
+Sex: M
+CI type: 13
+Volume: 4
+Range: 4
+Discrimination: 5

diff --git a/modular/shell/exercises/hearing/data/gerdal/Data0499 b/modular/shell/exercises/hearing/data/gerdal/Data0499
new file mode 100644 (file)
index 0000000..89073b8
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/gerdal/Data0499
@@ -0,0 +1,9 @@
+# 
+Reported: Mon Jun 20 16:58:45 2011
+Subject: scaryLennon399
+Year/month of birth: 1999/08
+Sex: F
+CI type: 12
+Volume: 3
+Range: 9
+Discrimination: 5

diff --git a/modular/shell/exercises/hearing/data/gerdal/Data0505 b/modular/shell/exercises/hearing/data/gerdal/Data0505
new file mode 100644 (file)
index 0000000..53f18b0
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/gerdal/Data0505
@@ -0,0 +1,9 @@
+# 
+Reported: Tue Aug 9 13:32:11 2011
+Subject: babyJonas401
+Year/month of birth: 1996/01
+Sex: N
+CI type: 1
+Volume: 3
+Range: 3
+Discrimination: 4

diff --git a/modular/shell/exercises/hearing/data/gerdal/Data0520 b/modular/shell/exercises/hearing/data/gerdal/Data0520
new file mode 100644 (file)
index 0000000..5eb9953
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/gerdal/Data0520
@@ -0,0 +1,9 @@
+# 
+Reported: Mon Jun 20 11:31:59 2011
+Subject: madonnaJonas411
+Year/month of birth: 1998/06
+Sex: N
+CI type: 23
+Volume: 8
+Range: 9
+Discrimination: 6

diff --git a/modular/shell/exercises/hearing/data/gerdal/Data0523 b/modular/shell/exercises/hearing/data/gerdal/Data0523
new file mode 100644 (file)
index 0000000..db57e3d
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/gerdal/Data0523
@@ -0,0 +1,9 @@
+# 
+Reported: Sat Sep 3 15:14:46 2011
+Subject: georgeBeatle412
+Year/month of birth: 1997/05
+Sex: N
+CI type: 1
+Volume: 8
+Range: 10
+Discrimination: 2

diff --git a/modular/shell/exercises/hearing/data/gerdal/Data0528 b/modular/shell/exercises/hearing/data/gerdal/Data0528
new file mode 100644 (file)
index 0000000..ed7072f
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/gerdal/Data0528
@@ -0,0 +1,9 @@
+# 
+Reported: Sat Sep 24 13:35:24 2011
+Subject: scaryLennon414
+Year/month of birth: 1996/02
+Sex: N
+CI type: 18
+Volume: 4
+Range: 10
+Discrimination: 9

diff --git a/modular/shell/exercises/hearing/data/gerdal/Data0529 b/modular/shell/exercises/hearing/data/gerdal/Data0529
new file mode 100644 (file)
index 0000000..12aca05
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/gerdal/Data0529
@@ -0,0 +1,9 @@
+# 
+Reported: Wed Sep 28 10:46:08 2011
+Subject: madonnaAsparagus415
+Year/month of birth: 1993/07
+Sex: F
+CI type: 21
+Volume: 3
+Range: 10
+Discrimination: 6

diff --git a/modular/shell/exercises/hearing/data/gerdal/Data0541 b/modular/shell/exercises/hearing/data/gerdal/Data0541
new file mode 100644 (file)
index 0000000..d51d988
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/gerdal/Data0541
@@ -0,0 +1,9 @@
+# 
+Reported: Mon Jul 25 09:24:04 2011
+Subject: ringoBeet422
+Year/month of birth: 1999/10
+Sex: M
+CI type: 20
+Volume: 5
+Range: 8
+Discrimination: 7

diff --git a/modular/shell/exercises/hearing/data/gerdal/Data0543 b/modular/shell/exercises/hearing/data/gerdal/Data0543
new file mode 100644 (file)
index 0000000..18f27fd
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/gerdal/Data0543
@@ -0,0 +1,9 @@
+# 
+Reported: Fri Jun 10 14:58:13 2011
+Subject: gingerCarrot423
+Year/month of birth: 1991/01
+Sex: M
+CI type: 20
+Volume: 6
+Range: 0
+Discrimination: 5

diff --git a/modular/shell/exercises/hearing/data/gerdal/Data0549 b/modular/shell/exercises/hearing/data/gerdal/Data0549
new file mode 100644 (file)
index 0000000..470434c
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/gerdal/Data0549
@@ -0,0 +1,9 @@
+# 
+Reported: Fri Jun 17 14:43:38 2011
+Subject: paulJonas429
+Year/month of birth: 1993/08
+Sex: N
+CI type: 14
+Volume: 3
+Range: 4
+Discrimination: 3

diff --git a/modular/shell/exercises/hearing/data/gerdal/Data0551 b/modular/shell/exercises/hearing/data/gerdal/Data0551
new file mode 100644 (file)
index 0000000..396c3d9
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/gerdal/Data0551
@@ -0,0 +1,9 @@
+# 
+Reported: Wed Jun 1 10:09:42 2011
+Subject: ringoBackstreet431
+Year/month of birth: 1999/08
+Sex: M
+CI type: 24
+Volume: 3
+Range: 9
+Discrimination: 9

diff --git a/modular/shell/exercises/hearing/data/gerdal/Data0552 b/modular/shell/exercises/hearing/data/gerdal/Data0552
new file mode 100644 (file)
index 0000000..c5951a8
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/gerdal/Data0552
@@ -0,0 +1,9 @@
+# 
+Reported: Sat Jul 2 14:55:38 2011
+Subject: paulJonas432
+Year/month of birth: 1995/02
+Sex: M
+CI type: 10
+Volume: 2
+Range: 7
+Discrimination: 3

diff --git a/modular/shell/exercises/hearing/data/gerdal/Data0556 b/modular/shell/exercises/hearing/data/gerdal/Data0556
new file mode 100644 (file)
index 0000000..a94603d
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/gerdal/Data0556
@@ -0,0 +1,9 @@
+# 
+Reported: Sun Sep 11 16:33:54 2011
+Subject: princeCarrot434
+Year/month of birth: 1992/09
+Sex: M
+CI type: 16
+Volume: 9
+Range: 3
+Discrimination: 5

diff --git a/modular/shell/exercises/hearing/data/gerdal/Data0558 b/modular/shell/exercises/hearing/data/gerdal/Data0558
new file mode 100644 (file)
index 0000000..052dfd6
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/gerdal/Data0558
@@ -0,0 +1,9 @@
+# 
+Reported: Fri Sep 23 13:47:10 2011
+Subject: madonnaHarrison435
+Year/month of birth: 1992/02
+Sex: M
+CI type: 7
+Volume: 2
+Range: 7
+Discrimination: 1

diff --git a/modular/shell/exercises/hearing/data/gerdal/Data0559 b/modular/shell/exercises/hearing/data/gerdal/Data0559
new file mode 100644 (file)
index 0000000..77616a6
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/gerdal/Data0559
@@ -0,0 +1,9 @@
+# 
+Reported: Mon Sep 12 12:36:10 2011
+Subject: babyJonas436
+Year/month of birth: 1996/07
+Sex: F
+CI type: 21
+Volume: 9
+Range: 10
+Discrimination: 4

diff --git a/modular/shell/exercises/hearing/data/jamesm/NOTES b/modular/shell/exercises/hearing/data/jamesm/NOTES
new file mode 100644 (file)
index 0000000..e42bbc3
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/jamesm/NOTES
@@ -0,0 +1 @@
+Contact Janice about new calibration for data in August.

diff --git a/modular/shell/exercises/hearing/data/jamesm/data_217.txt b/modular/shell/exercises/hearing/data/jamesm/data_217.txt
new file mode 100644 (file)
index 0000000..45a18be
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/jamesm/data_217.txt
@@ -0,0 +1,9 @@
+# 
+Reported: Thu Sep 8 15:08:36 2011
+Subject: jayBackstreet179
+Year/month of birth: 1994/09
+Sex: N
+CI type: 18
+Volume: 6
+Range: 5
+Discrimination: 7

diff --git a/modular/shell/exercises/hearing/data/jamesm/data_219.txt b/modular/shell/exercises/hearing/data/jamesm/data_219.txt
new file mode 100644 (file)
index 0000000..bef77d3
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/jamesm/data_219.txt
@@ -0,0 +1,9 @@
+# 
+Reported: Wed Aug 24 14:44:27 2011
+Subject: beyonceHarrison181
+Year/month of birth: 1996/04
+Sex: F
+CI type: 15
+Volume: 9
+Range: 6
+Discrimination: 

diff --git a/modular/shell/exercises/hearing/data/jamesm/data_226.txt b/modular/shell/exercises/hearing/data/jamesm/data_226.txt
new file mode 100644 (file)
index 0000000..f70356e
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/jamesm/data_226.txt
@@ -0,0 +1,9 @@
+# 
+Reported: Mon Jul 25 11:10:05 2011
+Subject: madonnaMcCartney188
+Year/month of birth: 1992/03
+Sex: N
+CI type: 14
+Volume: 2
+Range: 1
+Discrimination: 4

diff --git a/modular/shell/exercises/hearing/data/jamesm/data_228.txt b/modular/shell/exercises/hearing/data/jamesm/data_228.txt
new file mode 100644 (file)
index 0000000..4c0f9bf
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/jamesm/data_228.txt
@@ -0,0 +1,9 @@
+# 
+Reported: Mon Jun 20 10:40:32 2011
+Subject: poshJonas189
+Year/month of birth: 1998/10
+Sex: M
+CI type: 18
+Volume: 2
+Range: 7
+Discrimination: 5

diff --git a/modular/shell/exercises/hearing/data/jamesm/data_231.txt b/modular/shell/exercises/hearing/data/jamesm/data_231.txt
new file mode 100644 (file)
index 0000000..07a1a04
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/jamesm/data_231.txt
@@ -0,0 +1,9 @@
+# 
+Reported: Mon Jun 27 10:30:07 2011
+Subject: scarySync192
+Year/month of birth: 1997/02
+Sex: N
+CI type: 6
+Volume: 5
+Range: 7
+Discrimination: 3

diff --git a/modular/shell/exercises/hearing/data/jamesm/data_236.txt b/modular/shell/exercises/hearing/data/jamesm/data_236.txt
new file mode 100644 (file)
index 0000000..5550acd
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/jamesm/data_236.txt
@@ -0,0 +1,9 @@
+# 
+Reported: Wed Jul 6 12:57:12 2011
+Subject: jayMcCartney194
+Year/month of birth: 1998/02
+Sex: N
+CI type: 20
+Volume: 5
+Range: 5
+Discrimination: 6

diff --git a/modular/shell/exercises/hearing/data/jamesm/data_255.txt b/modular/shell/exercises/hearing/data/jamesm/data_255.txt
new file mode 100644 (file)
index 0000000..2d93e9f
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/jamesm/data_255.txt
@@ -0,0 +1,9 @@
+# 
+Reported: Sat Jun 4 11:10:28 2011
+Subject: johnLennon210
+Year/month of birth: 1993/11
+Sex: N
+CI type: 18
+Volume: 6
+Range: 6
+Discrimination: 7

diff --git a/modular/shell/exercises/hearing/data/jamesm/data_261.txt b/modular/shell/exercises/hearing/data/jamesm/data_261.txt
new file mode 100644 (file)
index 0000000..cc8f33e
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/jamesm/data_261.txt
@@ -0,0 +1,9 @@
+# 
+Reported: Mon Aug 15 10:28:56 2011
+Subject: paulBroccoli212
+Year/month of birth: 1997/10
+Sex: F
+CI type: 1
+Volume: 3
+Range: 8
+Discrimination: 2

diff --git a/modular/shell/exercises/hearing/data/jamesm/data_264.txt b/modular/shell/exercises/hearing/data/jamesm/data_264.txt
new file mode 100644 (file)
index 0000000..d9ca437
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/jamesm/data_264.txt
@@ -0,0 +1,9 @@
+# 
+Reported: Tue Aug 2 11:21:23 2011
+Subject: jaySync215
+Year/month of birth: 1993/02
+Sex: N
+CI type: 2
+Volume: 4
+Range: 9
+Discrimination: 2

diff --git a/modular/shell/exercises/hearing/data/jamesm/data_266.txt b/modular/shell/exercises/hearing/data/jamesm/data_266.txt
new file mode 100644 (file)
index 0000000..43c79cc
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/jamesm/data_266.txt
@@ -0,0 +1,9 @@
+# 
+Reported: Thu Sep 15 08:58:48 2011
+Subject: johnStarr217
+Year/month of birth: 1996/05
+Sex: N
+CI type: 15
+Volume: 6
+Range: 10
+Discrimination: 6

diff --git a/modular/shell/exercises/hearing/data/jamesm/data_280.txt b/modular/shell/exercises/hearing/data/jamesm/data_280.txt
new file mode 100644 (file)
index 0000000..034b6fe
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/jamesm/data_280.txt
@@ -0,0 +1,9 @@
+# 
+Reported: Thu Sep 15 16:14:23 2011
+Subject: johnAsparagus231
+Year/month of birth: 1997/02
+Sex: M
+CI type: 23
+Volume: 9
+Range: 10
+Discrimination: 8

diff --git a/modular/shell/exercises/hearing/data/jamesm/data_282.txt b/modular/shell/exercises/hearing/data/jamesm/data_282.txt
new file mode 100644 (file)
index 0000000..6f9a261
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/jamesm/data_282.txt
@@ -0,0 +1,9 @@
+# 
+Reported: Fri May 13 15:16:27 2011
+Subject: georgeBackstreet233
+Year/month of birth: 1991/01
+Sex: F
+CI type: 8
+Volume: 3
+Range: 6
+Discrimination: 5

diff --git a/modular/shell/exercises/hearing/data/jamesm/data_290.txt b/modular/shell/exercises/hearing/data/jamesm/data_290.txt
new file mode 100644 (file)
index 0000000..d8a9b76
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/jamesm/data_290.txt
@@ -0,0 +1,9 @@
+# 
+Reported: Thu Jun 9 14:44:07 2011
+Subject: babyJonas240
+Year/month of birth: 1993/03
+Sex: M
+CI type: 3
+Volume: 0
+Range: 9
+Discrimination: 3

diff --git a/modular/shell/exercises/hearing/data/jamesm/data_293.txt b/modular/shell/exercises/hearing/data/jamesm/data_293.txt
new file mode 100644 (file)
index 0000000..9d8ce72
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/jamesm/data_293.txt
@@ -0,0 +1,9 @@
+# 
+Reported: Thu Jun 2 16:58:46 2011
+Subject: babyJonas240
+Year/month of birth: 1993/03
+Sex: M
+CI type: 3
+Volume: 0
+Range: 9
+Discrimination: 3

diff --git a/modular/shell/exercises/hearing/data/jamesm/data_312.txt b/modular/shell/exercises/hearing/data/jamesm/data_312.txt
new file mode 100644 (file)
index 0000000..39f0eeb
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/jamesm/data_312.txt
@@ -0,0 +1,9 @@
+# 
+Reported: Wed Jul 6 10:39:52 2011
+Subject: robynStarr251
+Year/month of birth: 1996/04
+Sex: F
+CI type: 24
+Volume: 5
+Range: 4
+Discrimination: 3

diff --git a/modular/shell/exercises/hearing/data/jamesm/data_325.txt b/modular/shell/exercises/hearing/data/jamesm/data_325.txt
new file mode 100644 (file)
index 0000000..03b997f
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/jamesm/data_325.txt
@@ -0,0 +1,9 @@
+# 
+Reported: Tue Aug 23 12:54:20 2011
+Subject: scaryBeet260
+Year/month of birth: 1999/10
+Sex: N
+CI type: 23
+Volume: 7
+Range: 10
+Discrimination: 6

diff --git a/modular/shell/exercises/hearing/data/jamesm/data_326.txt b/modular/shell/exercises/hearing/data/jamesm/data_326.txt
new file mode 100644 (file)
index 0000000..ec50a03
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/jamesm/data_326.txt
@@ -0,0 +1,9 @@
+# 
+Reported: Tue Jul 5 12:20:47 2011
+Subject: poshHarrison261
+Year/month of birth: 1999/09
+Sex: N
+CI type: 20
+Volume: 4
+Range: 9
+Discrimination: 6

diff --git a/modular/shell/exercises/hearing/data/jamesm/data_343.txt b/modular/shell/exercises/hearing/data/jamesm/data_343.txt
new file mode 100644 (file)
index 0000000..d32cbba
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/jamesm/data_343.txt
@@ -0,0 +1,9 @@
+# 
+Reported: Mon Jul 4 09:54:35 2011
+Subject: princeHarrison273
+Year/month of birth: 1995/03
+Sex: F
+CI type: 2
+Volume: 4
+Range: 4
+Discrimination: 2

diff --git a/modular/shell/exercises/hearing/data/jamesm/data_360.txt b/modular/shell/exercises/hearing/data/jamesm/data_360.txt
new file mode 100644 (file)
index 0000000..b9abb37
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/jamesm/data_360.txt
@@ -0,0 +1,9 @@
+# 
+Reported: Thu Sep 29 12:56:35 2011
+Subject: ringoCarrot289
+Year/month of birth: 1997/12
+Sex: F
+CI type: 17
+Volume: 5
+Range: 10
+Discrimination: 7

diff --git a/modular/shell/exercises/hearing/data/jamesm/data_368.txt b/modular/shell/exercises/hearing/data/jamesm/data_368.txt
new file mode 100644 (file)
index 0000000..5787156
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/jamesm/data_368.txt
@@ -0,0 +1,9 @@
+# 
+Reported: Fri Aug 19 13:12:34 2011
+Subject: scaryBeet297
+Year/month of birth: 1994/02
+Sex: F
+CI type: 3
+Volume: 1
+Range: 10
+Discrimination: 2

diff --git a/modular/shell/exercises/hearing/data/jamesm/data_374.txt b/modular/shell/exercises/hearing/data/jamesm/data_374.txt
new file mode 100644 (file)
index 0000000..a06bcee
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/jamesm/data_374.txt
@@ -0,0 +1,9 @@
+# 
+Reported: Mon Sep 12 16:22:47 2011
+Subject: poshBeatle303
+Year/month of birth: 1996/01
+Sex: F
+CI type: 21
+Volume: 7
+Range: 4
+Discrimination: 7

diff --git a/modular/shell/exercises/hearing/data/jamesm/data_375.txt b/modular/shell/exercises/hearing/data/jamesm/data_375.txt
new file mode 100644 (file)
index 0000000..82f3d31
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/jamesm/data_375.txt
@@ -0,0 +1,9 @@
+# 
+Reported: Thu May 26 14:56:52 2011
+Subject: beyonceJonas304
+Year/month of birth: 1995/11
+Sex: F
+CI type: 16
+Volume: 5
+Range: 4
+Discrimination: 5

diff --git a/modular/shell/exercises/hearing/data/jamesm/data_383.txt b/modular/shell/exercises/hearing/data/jamesm/data_383.txt
new file mode 100644 (file)
index 0000000..6983306
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/jamesm/data_383.txt
@@ -0,0 +1,9 @@
+# 
+Reported: Mon Aug 22 16:26:09 2011
+Subject: beyonceSpice307
+Year/month of birth: 1997/01
+Sex: N
+CI type: 20
+Volume: 8
+Range: 10
+Discrimination: 6

diff --git a/modular/shell/exercises/hearing/data/jamesm/data_394.txt b/modular/shell/exercises/hearing/data/jamesm/data_394.txt
new file mode 100644 (file)
index 0000000..f3cca6c
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/jamesm/data_394.txt
@@ -0,0 +1,9 @@
+# 
+Reported: Sun May 1 14:41:09 2011
+Subject: ringoSpice318
+Year/month of birth: 1993/12
+Sex: M
+CI type: 25
+Volume: 2
+Range: 7
+Discrimination: 7

diff --git a/modular/shell/exercises/hearing/data/jamesm/data_395.txt b/modular/shell/exercises/hearing/data/jamesm/data_395.txt
new file mode 100644 (file)
index 0000000..e268b8c
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/jamesm/data_395.txt
@@ -0,0 +1,9 @@
+# 
+Reported: Wed Jun 29 15:46:50 2011
+Subject: madonnaBroccoli319
+Year/month of birth: 1999/06
+Sex: F
+CI type: 10
+Volume: 7
+Range: 8
+Discrimination: 7

diff --git a/modular/shell/exercises/hearing/data/jamesm/data_401.txt b/modular/shell/exercises/hearing/data/jamesm/data_401.txt
new file mode 100644 (file)
index 0000000..2ab1488
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/jamesm/data_401.txt
@@ -0,0 +1,9 @@
+# 
+Reported: Thu Sep 8 14:59:05 2011
+Subject: robynSpice324
+Year/month of birth: 1999/03
+Sex: F
+CI type: 10
+Volume: 3
+Range: 10
+Discrimination: 7

diff --git a/modular/shell/exercises/hearing/data/jamesm/data_418.txt b/modular/shell/exercises/hearing/data/jamesm/data_418.txt
new file mode 100644 (file)
index 0000000..709eda1
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/jamesm/data_418.txt
@@ -0,0 +1,9 @@
+# 
+Reported: Tue Aug 30 08:22:33 2011
+Subject: princeSpice335
+Year/month of birth: 1991/04
+Sex: F
+CI type: 7
+Volume: 1
+Range: 6
+Discrimination: 6

diff --git a/modular/shell/exercises/hearing/data/jamesm/data_457.txt b/modular/shell/exercises/hearing/data/jamesm/data_457.txt
new file mode 100644 (file)
index 0000000..20ccc88
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/jamesm/data_457.txt
@@ -0,0 +1,9 @@
+# 
+Reported: Wed Sep 14 09:18:41 2011
+Subject: beyonceBeatle366
+Year/month of birth: 1999/10
+Sex: N
+CI type: 12
+Volume: 6
+Range: 7
+Discrimination: 6

diff --git a/modular/shell/exercises/hearing/data/jamesm/data_474.txt b/modular/shell/exercises/hearing/data/jamesm/data_474.txt
new file mode 100644 (file)
index 0000000..5f89008
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/jamesm/data_474.txt
@@ -0,0 +1,9 @@
+# 
+Reported: Sun Aug 21 13:11:09 2011
+Subject: ringoMcCartney382
+Year/month of birth: 1997/08
+Sex: F
+CI type: 2
+Volume: 4
+Range: 5
+Discrimination: 

diff --git a/modular/shell/exercises/hearing/data/jamesm/data_475.txt b/modular/shell/exercises/hearing/data/jamesm/data_475.txt
new file mode 100644 (file)
index 0000000..ac7fe80
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/jamesm/data_475.txt
@@ -0,0 +1,9 @@
+# 
+Reported: Wed Sep 28 08:03:15 2011
+Subject: robynLennon383
+Year/month of birth: 1998/03
+Sex: N
+CI type: 4
+Volume: 6
+Range: 7
+Discrimination: 4

diff --git a/modular/shell/exercises/hearing/data/jamesm/data_476.txt b/modular/shell/exercises/hearing/data/jamesm/data_476.txt
new file mode 100644 (file)
index 0000000..2301e2e
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/jamesm/data_476.txt
@@ -0,0 +1,9 @@
+# 
+Reported: Fri Sep 2 09:48:10 2011
+Subject: babyBeet384
+Year/month of birth: 1996/04
+Sex: N
+CI type: 21
+Volume: 8
+Range: 8
+Discrimination: 9

diff --git a/modular/shell/exercises/hearing/data/jamesm/data_478.txt b/modular/shell/exercises/hearing/data/jamesm/data_478.txt
new file mode 100644 (file)
index 0000000..b6963a3
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/jamesm/data_478.txt
@@ -0,0 +1,9 @@
+# 
+Reported: Thu Sep 29 14:25:35 2011
+Subject: jayCarrot386
+Year/month of birth: 1991/11
+Sex: F
+CI type: 23
+Volume: 5
+Range: 8
+Discrimination: 5

diff --git a/modular/shell/exercises/hearing/data/jamesm/data_480.txt b/modular/shell/exercises/hearing/data/jamesm/data_480.txt
new file mode 100644 (file)
index 0000000..b9dfa67
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/jamesm/data_480.txt
@@ -0,0 +1,9 @@
+# 
+Reported: Tue May 3 11:27:09 2011
+Subject: beyonceZ388
+Year/month of birth: 1991/08
+Sex: N
+CI type: 24
+Volume: 4
+Range: 5
+Discrimination: 3

diff --git a/modular/shell/exercises/hearing/data/jamesm/data_489.txt b/modular/shell/exercises/hearing/data/jamesm/data_489.txt
new file mode 100644 (file)
index 0000000..4a5fbce
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/jamesm/data_489.txt
@@ -0,0 +1,9 @@
+# 
+Reported: Tue Jul 19 16:01:08 2011
+Subject: gingerMcCartney390
+Year/month of birth: 1997/07
+Sex: M
+CI type: 8
+Volume: 5
+Range: 4
+Discrimination: 2

diff --git a/modular/shell/exercises/hearing/data/jamesm/data_496.txt b/modular/shell/exercises/hearing/data/jamesm/data_496.txt
new file mode 100644 (file)
index 0000000..b979a63
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/jamesm/data_496.txt
@@ -0,0 +1,9 @@
+# 
+Reported: Tue Sep 20 12:29:04 2011
+Subject: beyonceLennon396
+Year/month of birth: 1997/11
+Sex: N
+CI type: 25
+Volume: 5
+Range: 8
+Discrimination: 5

diff --git a/modular/shell/exercises/hearing/data/jamesm/data_509.txt b/modular/shell/exercises/hearing/data/jamesm/data_509.txt
new file mode 100644 (file)
index 0000000..02d9126
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/jamesm/data_509.txt
@@ -0,0 +1,9 @@
+# 
+Reported: Thu Sep 22 08:43:31 2011
+Subject: beyonceCarrot405
+Year/month of birth: 1999/05
+Sex: N
+CI type: 5
+Volume: 5
+Range: 8
+Discrimination: 3

diff --git a/modular/shell/exercises/hearing/data/jamesm/data_510.txt b/modular/shell/exercises/hearing/data/jamesm/data_510.txt
new file mode 100644 (file)
index 0000000..354d6bb
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/jamesm/data_510.txt
@@ -0,0 +1,9 @@
+# 
+Reported: Sat May 14 08:52:25 2011
+Subject: ringoAsparagus406
+Year/month of birth: 1993/07
+Sex: F
+CI type: 1
+Volume: 6
+Range: 5
+Discrimination: 5

diff --git a/modular/shell/exercises/hearing/data/jamesm/data_517.txt b/modular/shell/exercises/hearing/data/jamesm/data_517.txt
new file mode 100644 (file)
index 0000000..2d1c735
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/jamesm/data_517.txt
@@ -0,0 +1,9 @@
+# 
+Reported: Sat Sep 3 14:40:34 2011
+Subject: gingerBeatle409
+Year/month of birth: 1999/02
+Sex: F
+CI type: 21
+Volume: 6
+Range: 10
+Discrimination: 8

diff --git a/modular/shell/exercises/hearing/data/jamesm/data_524.txt b/modular/shell/exercises/hearing/data/jamesm/data_524.txt
new file mode 100644 (file)
index 0000000..7458327
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/jamesm/data_524.txt
@@ -0,0 +1,9 @@
+# 
+Reported: Fri Jun 24 10:14:01 2011
+Subject: babyBackstreet413
+Year/month of birth: 1992/12
+Sex: F
+CI type: 15
+Volume: 4
+Range: 7
+Discrimination: 6

diff --git a/modular/shell/exercises/hearing/data/jamesm/data_553.txt b/modular/shell/exercises/hearing/data/jamesm/data_553.txt
new file mode 100644 (file)
index 0000000..73ac3e0
--- /dev/null
+++ b/modular/shell/exercises/hearing/data/jamesm/data_553.txt
@@ -0,0 +1,9 @@
+# 
+Reported: Tue Jun 14 13:22:45 2011
+Subject: scaryBackstreet433
+Year/month of birth: 1992/12
+Sex: F
+CI type: 22
+Volume: 7
+Range: 5
+Discrimination: 4

diff --git a/modular/shell/exercises/hearing/ex_data.txt b/modular/shell/exercises/hearing/ex_data.txt
new file mode 100644 (file)
index 0000000..023e8b0
--- /dev/null
+++ b/modular/shell/exercises/hearing/ex_data.txt
@@ -0,0 +1,9 @@
+# Example data file
+Reported: Wed Oct 12 10:22:55 2011
+Subject: appaloosa123
+Year/month of birth: 1994/12
+Sex: M # options are 'MFN', where 'N' is "not given"
+CI type: 4 # integer in the range 1..25
+Volume: 3
+Range: 7
+Discrimination: 2

diff --git a/modular/shell/exercises/hearing/generate_data.py b/modular/shell/exercises/hearing/generate_data.py
new file mode 100644 (file)
index 0000000..10906c9
--- /dev/null
+++ b/modular/shell/exercises/hearing/generate_data.py
@@ -0,0 +1,246 @@
+import sys
+import os
+import math
+from random import choice, randint, random
+import calendar
+
+class Person:
+    maxCI = 25
+    # teenagers are hereby declared to be between 11 and 20 years old
+    birthyears = range(1991,2000)
+    repeatFraction = 0.1
+    
+    names = ['john', 'paul', 'george', 'ringo',\
+        'baby','scary','posh','ginger','madonna',\
+        'prince','robyn','beyonce','jay'] 
+    words =['Beatle','Spice','Backstreet','Sync','Jonas',\
+        'Lennon','McCartney','Starr','Harrison','Z',\
+        'Carrot','Broccoli','Asparagus','Beet']
+    CIs=range(1,maxCI+1)
+    birthmonths= range(1,13)
+    #ensure unique ids
+    serialNum=173
+    sexes=['M','F','N']
+
+    def age(self, curyr=2011, curmo=11):
+        return curyr+(1.*curmo-1.)/12. - self.birthyear - 1.*(self.birthmonth-1.)/12.
+
+    def __init__(self):
+        self.subject = choice(Person.names)+choice(Person.words)+ ('%03d' % Person.serialNum)
+        Person.serialNum = Person.serialNum + 1
+
+        self.birthyear  = choice(Person.birthyears)
+        self.birthmonth = choice(Person.birthmonths)
+   
+        self.sex = choice(Person.sexes)
+        age = self.age(2011,11)
+        self.CI = choice(Person.CIs) 
+
+        # newer CIs have better volume, discrimination;
+        # range goes down with age.  (say). 
+
+        CInewness = (self.CI-1.)/(1.*max(Person.CIs))
+        # from oldest CI to newest, gain 2 volume pts: 
+        self.trueVolume = randint(0,4)+randint(1,4)+round(2.*CInewness)
+
+        # from oldest CI to newest, gain 3 discrimination pts: 
+        self.trueDiscrimination = randint(0,3)+randint(1,4)+round(3.*CInewness)
+        
+        # 21-year-olds would lose 3 range points over 10 year olds (say)
+        self.trueRange = randint(0,4)+randint(1,6)+round((10.-(self.age()-11.))*3./10.)
+
+        # Most people don't repeat; those that do take the test 2-5 times
+        if (random() > Person.repeatFraction):
+            self.repeats = 1
+        else:
+            self.repeats=choice(range(2,6))
+
+
+from numpy import polyfit, array
+def test_peopleCorrelations():
+    testpeople = []
+    npeople = 4000
+    for pnum in xrange(1,npeople):
+        testpeople.append(Person())
+
+    data = [[p.age(), p.CI, p.trueVolume, p.trueRange, p.trueDiscrimination] for p in testpeople]
+    ages, cis, vols, ranges, discs = zip(*data)
+
+    CIVolParam, dummy   = polyfit(cis, vols, 1) 
+    CIRangeParam, dummy = polyfit(cis, ranges, 1) 
+    CIDiscParam, dummy  = polyfit(cis, discs, 1)
+
+    AgeVolParam, dummy   = polyfit(ages, vols, 1) 
+    AgeRangeParam, dummy = polyfit(ages, ranges, 1) 
+    AgeDiscParam, dummy  = polyfit(ages, discs, 1) 
+
+    assert CIVolParam > 0.75*(2./25.) and CIVolParam < 1.25*(2./25.)
+    assert CIDiscParam > 0.75*(3./25.) and CIDiscParam < 1.25*(3./25.)
+    assert AgeRangeParam < 0.75*(-3./10.) and AgeRangeParam > 1.25*(-3./10.)
+
+    zeroTol = 0.03
+    assert abs(CIRangeParam) < zeroTol
+    assert abs(AgeVolParam)  < zeroTol
+    assert abs(AgeDiscParam) < zeroTol
+
+
+
+class Measurement:
+    incompleteFraction = 0.05
+    serialNum = 211
+    def randomDate(self):
+        hrs = range(8,17)
+        mins = range(1,60)
+        secs = range(1,60)
+        months = range(5,10)
+
+        month = choice(months)
+        monthname = calendar.month_abbr[month]
+        day = choice(range(1,calendar.monthrange(2011, month)[1]))
+        dayname = calendar.day_abbr[calendar.weekday(2011, month, day)]
+        hr = choice(hrs)
+        min = choice(mins)
+        sec = choice(secs)
+        
+        datestring = '%s %s %d %02d:%02d:%02d %s' % (dayname, monthname, day, hr, min, sec, '2011')
+        return [datestring, month, day, hr, min, sec]
+
+    def limit(self,n):
+        if n < 1 :
+            n = 1
+        if n > 10 :
+            n = 10
+        return n 
+
+    def __init__(self, p):
+        """Generate a result"""
+        self.person = p
+        self.datestring, self.month, self.day, self.hr, self.min, self.sec = self.randomDate();
+
+        self.serialNum = Measurement.serialNum
+        Measurement.serialNum = Measurement.serialNum + 1
+
+        # +/- 1 random measurement error
+        self.volume = self.person.trueVolume + choice([-1,0,0,0,+1])
+        self.range  = self.person.trueRange + choice([-1,0,0,0,+1])
+        self.discrimination  = self.person.trueDiscrimination + choice([-1,0,0,0,+1])
+
+        self.volume = self.limit(self.volume)
+        self.range = self.limit(self.range)
+        self.discrimination = self.limit(self.discrimination)
+
+        # before this date, things were being recorded 0..9 rather than 1..10
+        fixmonth = 8
+        fixday = 18
+        fixhr = 10
+
+        fixdate = fixmonth*10000 + fixday*100 + fixhr 
+        checkdate = self.month*10000 + self.day*100 + self.hr 
+        if checkdate < fixdate:
+            self.volume = self.volume - 1
+            self.range = self.range - 1
+            self.discrimination = self.discrimination - 1
+    
+        if (random() < Measurement.incompleteFraction):
+            self.discrimination = None
+        
+
+    def __str__(self):
+        text = '# ' + '\n'
+        text += "%s: %s\n" % ( 'Reported', self.datestring )
+        text += "%s: %s\n" % ( 'Subject',  self.person.subject )
+        text += "%s: %4d/%02d\n" % ( 'Year/month of birth', self.person.birthyear,  self.person.birthmonth )
+        text += "%s: %s\n" % ( 'Sex', self.person.sex )
+        text += "%s: %d\n" % ( 'CI type', self.person.CI )
+        text += "%s: %d\n" % ( 'Volume', self.volume )
+        text += "%s: %d\n" % ( 'Range', self.range )
+        if self.discrimination is None :
+            text += "%s: \n" % ( 'Discrimination' )
+        else:
+            text += "%s: %d\n" % ( 'Discrimination', self.discrimination )
+    
+        return text
+
+class Datataker:
+    names = ['angela', 'JamesD', 'jamesm', 'Frank_Richard',\
+        'lab183','THOMAS','alexander','Beth','Lawrence',\
+        'Toni', 'gerdal', 'Bert', 'Ernie', 'olivia', 'Leandra',\
+        'sonya_p', 'h_jackson'] 
+    filenamestyles = ['data_%d','Data%04d','%d','%04d','audioresult-%05d']
+    suffixstyles = ['.dat','.txt','','','.DATA']
+    tookNotesFraction = 0.5
+    notes = ['Took data on Thursday and Friday until 4pm;\nAll day saturday.\n',\
+             'Contact Janice about new calibration for data in August.\n',\
+             'Submission of hours last week shows only 7 hours because \none was spent cleaning the lab.\n',\
+             'Had some trouble accessing data submission form on Saturday,\nso fewer submissions then.\n',\
+             'Third subject had real problems with the discrimiation test, so omitted.\n',\
+             'Discrimination test seems kind of flaky - had to skip in several cases\n',\
+             'Fuse blew midway through this weeks data taking,\nfewer results than last week.\n']
+    notefilenames = ['notes.txt','NOTES','ReadMe','misc.txt','About']
+
+    def __init__(self):
+        self.name = choice(Datataker.names)
+        Datataker.names.remove(self.name)
+        self.filenameprefix = choice(Datataker.filenamestyles)
+        self.filenamesuffix = choice(Datataker.suffixstyles)
+        self.measures = []
+        self.tookNotes = False
+        if (random() < Datataker.tookNotesFraction) :
+            self.tookNotes = True 
+            self.notes = choice(Datataker.notes)
+            self.noteFilename = choice(Datataker.notefilenames)
+
+    def addmeasurement(self,measurement):
+        self.measures.append(measurement)
+
+    def write(self):
+        os.mkdir(self.name)
+        os.chdir(self.name)
+
+        if (self.tookNotes):
+            fname = self.noteFilename
+            file = open(fname, 'w')
+            file.write(self.notes)
+            file.close()
+
+        for m in self.measures:
+            fname = self.filenameprefix % m.serialNum + self.filenamesuffix
+            file = open(fname, 'w')
+            file.write(str(m))
+            file.close()
+        os.chdir('..')
+            
+ 
+def main():
+    #test_peopleCorrelations()
+
+    npeople = 300 # should generate ~ .9*300 + 3.5*.1*300 ~ 375 files
+    nfiles = 351
+
+    people = []
+    for pnum in range(npeople):
+        people.append(Person())
+
+    measurements = []
+    for p in people:
+        for m in range(p.repeats):
+            measurements.append(Measurement(p))
+
+    nexperimenters = 7
+    experimenters = []
+    for i in range(nexperimenters):
+        experimenters.append(Datataker())
+
+    for fnum in xrange(min(len(measurements), nfiles)):
+        ex = choice(experimenters)
+        ex.addmeasurement(measurements[fnum]) 
+
+    os.mkdir('data')
+    os.chdir('data')
+    for ex in experimenters:
+        ex.write()
+    os.chdir('..')
+
+if __name__=='__main__':
+    sys.exit(main())
+

diff --git a/modular/shell/exercises/hello/hello b/modular/shell/exercises/hello/hello
new file mode 100755 (executable)
index 0000000..cb2ad0f
--- /dev/null
+++ b/modular/shell/exercises/hello/hello
@@ -0,0 +1,3 @@
+#!/bin/bash
+
+echo "Hello, World"

diff --git a/modular/shell/instructor.md b/modular/shell/instructor.md
new file mode 100644 (file)
index 0000000..ce145d2
--- /dev/null
+++ b/modular/shell/instructor.md
@@ -0,0 +1,632 @@
+# Introduction to the shell
+
+* Name-drop [terminal][] as distinct from [shell][].
+    * Get folks to a terminal.
+* Mention [Bash][] as a common default shell
+    * If you're in a different shell, run `bash` to get Bash.
+    * Mention commonality between shells, but existence of differences.
+        * Maybe mention [POSIX][].
+    * [Name-drop the Advanced Bash-Scripting Guide][ABSG].
+* Have them clone the boot camp repository:
+
+        $ git clone -b YYYY-MM-PLACE --single-branch git://github.com/swcarpentry/boot-camps.git
+
+* `echo` (e.g. `echo Hello, World`)
+    * Remind them to press enter.
+    * Useful for printing from a shell script, for displaying
+      variables, and for generating known values to pass to other
+      programs.
+
+# File systems
+
+* `pwd` (print working directory)
+* `ls` (list directory contents)
+* Directory/folder equivalence
+* Directories are just lists of files or other directories.
+* New-terminals/shells start in the *home* directory.
+    * Every user has their own home directory.
+* `whoami` (what is my user name)
+
+# File types
+
+* `ls` output is colored (run it in the home directory).
+    * Directories are usually blue (customize with `~/.dir_colors`).
+* `touch` (create an empty file)
+
+        $ touch testfile
+
+* `ls` again, see `testfile`.  Note that it's white (a general file).
+* `ls -F`, because some terminals don't support colors.
+    * Directories marked with a trailing slash (/)
+    * Executables marked with a trailing star (*)
+* `ls -l` to get permissions, ownership, size, modification times, etc.
+    * If the entry is a directory, then the first letter will be a `d`.
+    * The fifth column shows you the size of the entries in bytes.
+        * Notice that `testfile` has a size of zero.
+* `rm` to remove files and (with `-r`) directories.
+
+        $ rm testfile
+
+* Run `ls` again, and see that `testfile` is gone.
+
+# Changing Directories
+
+* `cd` (change directory) into the directory they'd previously cloned
+
+        $ cd boot-camps
+
+* `ls` to see what's in the newly current directory
+* `cd` into the exercises section, then `ls` again, and `ls -F`.
+    * You may want to `cd "$LOC1"; cd "$LOC2"` instead of jumping
+      directly via `cd "$LOC1/$LOC2"`.
+* `cd` without arguments takes you back to your home directory
+* Change back into the examples directory
+
+# Arguments
+
+* `-F` and `-l` are arguments to `ls`
+* `ls` takes lots of arguments
+* `man` pages (when they exist) usually describe these options
+
+        $ man ls
+
+    * `man` displays the page using your `PAGER`.  This is probably
+      `less`.
+
+        * Page down with space or the "page down" key
+        * Page up with `b` or the "page up" key
+        * Search by regexp with `/`
+        * Get help with `h` with other `less` key bindings
+        * Quit with `q`
+
+* `man find` for a complicated page
+    * Don't worry about learning all of this, just refer back to it as
+      needed.
+
+## Exercise: `ls` options
+
+1. Use the manual page for `ls` to guess what you would expect from
+   using the arguments `-l`, '-t', '-r' at the same time.
+2. Try the following and see if you can figure out what they do,
+   either by examining the results or consulting the manual page.
+    * `ls -lS` (equivalent to `ls -l -S`)
+    * `ls -lt` (equivalent to `ls -l -t`)
+    * `ls -1`  (that's the number one, not a letter 'ell')
+
+# Examining the contents of other directories
+
+* Instead of `cd "$LOC"; ls`, you can use `ls "$LOC"`
+    * Look at a few directories in this repository
+* Use `cd "$LOC"` to change into a few directories as well
+    * Folks should be comfortable with `cd "$LOC1/$LOC2"` by now
+
+# Full vs. relative paths
+
+* Directories are arranged in a single hierarchy, based on the
+  *root directory* `/`.
+* Full (aka absolute) paths include everything from the root down.
+* Relative paths don't start with the root directory, and are
+  (usually) interpreted relative to the current working directory
+  (`pwd`).
+* Examples with full paths:
+
+        $ cd /home/swc/boot-camps/modular
+
+* Examples with relative paths:
+
+        $ cd
+        $ cd boot-camps/modular
+
+# Exercise: Listing `/bin`
+
+List the contents of the `/bin` directory (a full path).  Do you see
+anything familiar in there?
+
+# Saving time with shortcuts, wild cards, and tab completion
+
+## Path shortcuts
+
+* `~` for your home directory
+* `..` for the parent of the current working directory
+* Chainable.  For example: `ls ../../` or `ls ~/../`.
+* `.` for the current directory
+    * Equivalent commands:
+        * `ls`
+        * `ls .`
+        * `ls ././././.`
+* These shortcuts are not necessary, they are provided for your
+  convenience.
+
+# Example: Cochlear implants
+
+Introduce the [cochlear implant example][cochlear] to practice with
+the coming topics.
+
+## Wildcards
+
+* Docs for wildcards are in in glob(7).
+* For cochlear implants, cd into `data/THOMAS` for this.
+* `ls`, there are a bunch of files with four-digit names
+* `ls *`, same list
+* `ls *1', all files ending with 1
+* `ls /usr/bin/*.sh`, an absolute path example
+* `ls *4*1`, compound wildcards
+    * These are expanded *by the shell*, before being passed to the
+      command, so the following are identical;
+
+            $ ls *4*1
+            $ ls 0241 0341 0431 0481
+
+### Exercise: Globbing with `ls`
+
+Do each of the following using a single `ls` command without
+navigating to a different directory.
+
+1.  List all of the files in `/bin` that contain the letter `a`
+2.  List all of the files in `/bin` that contain the letter `a` or the letter `b`
+3.  List all of the files in `/bin` that contain the letter `a` AND the letter `b`
+
+## Tab completion
+
+* Change to the home directory.
+* Work back to the coclear implant example data using tab completion
+
+        $ cd b<tab>
+        $ cd boot-camps/
+        $ cd boot-camps/<tab><tab>
+        …list of choices…
+
+* Tab completion for executables in the `PATH`.
+
+        $ e<tab><tab>
+        $ ec<tab>
+        $ echo
+
+## Command History
+
+* Work through history with up and down arrows.
+* `^C` to cancel the command you are writing and give you a fresh
+  prompt.
+* `^R` to reverse-search through your command history.
+* `history` to print your history
+    * `history | grep …` to grab some useful command
+    * `!123` to reuse the 123rd command in your history
+
+### Excercise: History
+
+1. Find the line number in your history for the last exercise (listing
+   files in `/bin`) and reissue that command.
+
+## Which program?
+
+* `ls`, `rm`, `find`, … are stand-alone programs.
+* `command`, `shift`, `cd`, `echo`, `pwd`, … are likely shell builtins
+* `which COMMAND` to look up the command in your `PATH`
+* `command -V COMMAND` to get useful info:
+
+        $ command -V cd
+        cd is a shell builtin
+        $ command -v find
+        /usr/bin/find
+        $ command -V ls
+        ls is aliased to `ls --color=auto'
+* Explain `PATH` lookup (`echo $PATH`)
+* In the example directory, there's a `hello` script
+    * Try to run it with `hello`.  Oops, not in the `PATH`!
+    * Give a path with `./hello`.  Success!
+        * Something that `.` is useful for!
+    * `/home/…/boot-camps/…/hello`
+    * `../exercises/hello/hello`
+    * Only get `PATH` lookups when there aren't any `/` in your command.
+
+## Examining Files
+
+We now know how to switch directories, run programs, and look at the
+contents of directories, but how do we look at the contents of files?
+
+* `cat` (concatenate).  In the cochlear implant example,
+
+        $ cat ex_data.txt
+        $ cat ex_data.txt ex_data.txt
+
+### Exercise: 
+
+1.  Print out the contents of the `dictionary/dictionary.txt` file.
+    What does this file contain?
+
+2.  Without changing directories, use one short command to print the
+    contents of all of the files in the
+    `/home/…/boot-camps/…/exercises/hearing/data/THOMAS` directory.
+
+## Paging
+
+* How to view large files?
+* `less` (is `more`)
+
+        $ less ~/boot-camps/…/exercises/dictionary/dictionary.txt
+
+* `less` opens the file and lets you navigate through it.
+* As mentioned with the `man` page stuff earlier, `h` for help, `q` to
+  quit.
+* Searches with `/` don't wrap, search from the beginning of the file.
+
+### Example: paging through man pages
+
+Use the commands we've learned so far to figure out how to search
+in reverse while using `less`.
+
+## Redirection
+
+* Back to the hearing example!
+* Enter the `Bert` subdirectory.
+* Print all the experimental results
+
+        $ cat au*
+
+* Redirect that into a file:
+
+        $ cat au* > ../all_data
+
+* Examine `all_data` with `less`.
+* If `all_data` had already existed, we would overwritten it.
+* `>` tells the shell to take the output from what ever is (stdout) on
+  the left and dump it into the file on the right.
+* `>>` is the same, but it appends instead of overwriting.
+
+### Exercise: Redirection
+
+Use `>>`, to append the contents of all of the files whose names
+contain the number 4 in the `gerdal` directory to the existing
+`all_data` file. Thus, when you are done `all_data` should contain all
+of the experiment data from `Bert` and any experimental data file from
+`gerdal` with filenames that contain the number 4.
+
+## Creating, moving, copying, and removing
+
+We've created a file called `all_data` using the redirection operator
+`>`. This file is critical—it's our analysis results—so we want to
+make copies so that the data is backed up.
+
+* `cp` (copy)
+
+        $ cp all_data all_data_backup
+
+* `mv` (move)
+
+        $ mv all_data_backup /tmp/
+
+    * Explain what `/tmp` is for, and that it doesn't (usually)
+      survive reboots.
+* Rename with `mv`.
+
+        $ mv all_data all_data_IMPORTANT
+
+* `rm` (remove)
+
+        $ rm /tmp/all_data_backup
+
+* `mkdir` (make directory)
+* By default, `rm`, will NOT delete directories.  Use `-r` (carefully!)
+    * Also, `rmdir` (remove directory)
+
+### Excercise: Rename, create, and copy
+
+1.  Rename the `all_data_IMPORTANT` file to `all_data`.
+2.  Create a directory in the `data` directory called `foo`
+3.  Then, copy the `all_data` file into `foo`
+
+## Count the words
+
+* `wc` (word count).  From `hearing/data`:
+
+        $ wc Bert/* gerdal/*4*
+
+* Three columns for each file:
+    * Number of lines
+    * Number of words
+    * Number of characters
+* The final line contains this information summed over all of the
+  files.
+* Check summation:
+
+        $ wc all_data
+
+* Compare byte size with character count
+
+        $ ls -l all_data
+
+### Exercise: Longest line length
+
+Figure out how to get `wc` to print the length of the longest line in
+`all_data`.
+
+## The awesome power of the Pipe
+
+Suppose I wanted to only see the total number of character, words, and
+lines across the files `Bert/*` and `gerdal/*4*`. I don't want to
+see the individual counts, just the total. Of course, I could just do:
+
+    wc all_data
+
+Since this file is a concatenation of the smaller files. Sure, this
+works, but I had to create the `all_data` file to do this. Thus, I
+have wasted a precious 10445 bytes of hard disk space. We can do this
+*without* creating a temporary file, but first I have to show you two
+more commands: `head` and `tail`. These commands print the first few,
+or last few, lines of a file, respectively. Try them out on
+`all_data`:
+
+    head all_data
+    tail all_data
+
+The `-n` option to either of these commands can be used to print the
+first or last `n` lines of a file. To print the first/last line of the
+file use:
+
+    head -n 1 all_data
+    tail -n 1 all_data
+
+Let's turn back to the problem of printing only the total number of
+lines in a set of files without creating any temporary files. To do
+this, we want to tell the shell to take the output of the `wc Bert/*
+gerdal/*4*` and send it into the `tail -n 1` command. The `|`
+character (called pipe) is used for this purpose. Enter the following
+command:
+
+    wc Bert/* gerdal/Data0559 | tail -n 1
+
+This will print only the total number of lines, characters, and words
+across all of these files. What is happening here? Well, `tail`, like
+many command line programs will read from the *standard input* when it
+is not given any files to operate on. In this case, it will just sit
+there waiting for input. That input can come from the user's keyboard
+*or from another program*. Try this:
+
+    tail -n 2
+
+Notice that your cursor just sits there blinking. Tail is waiting for
+data to come in. Now type:
+
+    French
+    fries
+    are
+    good
+
+then CONTROL+d. You should is the lines:
+
+    are
+    good
+
+printed back at you. The CONTROL+d keyboard shortcut inserts an
+*end-of-file* character. It is sort of the standard way of telling the
+program "I'm done entering data". The `|` character is replaces the
+data from the keyboard with data from another command. You can string
+all sorts of commands together using the pipe.
+
+The philosophy behind these command line programs is that none of them
+really do anything all that impressive. BUT when you start chaining
+them together, you can do some really powerful things really
+efficiently. If you want to be proficient at using the shell, you must
+learn to become proficient with the pipe and redirection operators:
+`|`, `>`, `>>`.
+
+
+### A sorting example
+
+Let's create a file with some words to sort for the next example. We
+want to create a file which contains the following names:
+
+    Bob
+    Alice
+    Diane
+    Charles
+
+To do this, we need a program which allows us to create text
+files. There are many such programs, the easiest one which is
+installed on almost all systems is called `nano`. Navigate to `/tmp`
+and enter the following command:
+
+    nano toBeSorted
+
+Now enter the four names as shown above. When you are done, press
+CONTROL+O to write out the file. Press enter to use the file name
+`toBeSorted`. Then press CONTROL+x to exit `nano`.
+
+When you are back to the command line, enter the command:
+
+    sort toBeSorted
+
+Notice that the names are now printed in alphabetical order.
+
+* * * *
+**Short Exercise**
+
+Use the `echo` command and the append operator, `>>`, to append your
+name to the file, then sort it and make a new file called Sorted.
+
+* * * *
+
+Let's navigate back to `~/boot-camps/shell/data`. Enter the following command:
+
+    wc Bert/* | sort -k 3 -n
+
+We are already familiar with what the first of these two commands
+does: it creates a list containing the number of characters, words,
+and lines in each file in the `Bert` directory. This list is then
+piped into the `sort` command, so that it can be sorted. Notice there
+are two options given to sort:
+
+1.  `-k 3`: Sort based on the third column
+2.  `-n`: Sort in numerical order as opposed to alphabetical order
+
+Notice that the files are sorted by the number of characters.
+
+* * * *
+**Short Exercise**
+
+1. Use the `man` command to find out how to sort the output from `wc` in
+reverse order.
+
+2. Combine the `wc`, `sort`, `head` and `tail` commands so that only the
+`wc` information for the largest file is listed
+
+Hint: To print the smallest file, use:
+
+    wc Bert/* | sort -k 3 -n | head -n 1
+
+* * * *
+
+Printing the smallest file seems pretty useful. We don't want to type
+out that long command often. Let's create a simple script, a simple
+program, to run this command. The program will look at all of the
+files in the current directory and print the information about the
+smallest one. Let's call the script `smallest`. We'll use `nano` to
+create this file. Navigate to the `data` directory, then:
+
+    nano smallest
+
+Then enter the following text:
+
+    #!/bin/bash
+    wc * | sort -k 3 -n | head -n 1
+
+Now, `cd` into the `Bert` directory and enter the command
+`../smallest`. Notice that it says permission denied. This happens
+because we haven't told the shell that this is an executable
+file. If you do `ls -l ../smallest`, it will show you the permissions on
+the left of the listing.
+
+Enter the following commands:
+
+    chmod a+x ../smallest
+    ../smallest
+
+The `chmod` command is used to modify the permissions of a file. This
+particular command modifies the file `../smallest` by giving all users
+(notice the `a`) permission to execute (notice the `x`) the file. If
+you enter:
+
+    ls -l ../smallest
+
+You will see that the file name is green and the permissions have changed.
+Congratulations, you just created your first shell script!
+
+# Searching files
+
+You can search the contents of a file using the command `grep`. The
+`grep` program is very powerful and useful especially when combined
+with other commands by using the pipe. Navigate to the `Bert`
+directory. Every data file in this directory has a line which says
+"Range". The range represents the smallest frequency range that can be
+discriminated. Lets list all of the ranges from the tests that Bert
+conducted:
+
+    grep Range *
+
+* * * *
+**Short Exercise**
+
+Create an executable script called `smallestrange` in the `data`
+directory, that is similar to the `smallest` script, but prints the
+file containing the file with the smallest Range. Use the commands
+`grep`, `sort`, and `tail` to do this.
+
+* * * *
+
+
+# Finding files
+
+The `find` program can be used to find files based on arbitrary
+criteria. Navigate to the `data` directory and enter the following
+command:
+
+    find . -print
+
+This prints the name of every file or directory, recursively, starting
+from the current directory. Let's exclude all of the directories:
+
+    find . -type f -print
+
+This tells `find` to locate only files. Now try these commands:
+
+    find . -type f -name "*1*"
+    find . -type f -name "*1*" -or -name "*2*" -print
+    find . -type f -name "*1*" -and -name "*2*" -print
+
+The `find` command can acquire a list of files and perform some
+operation on each file. Try this command out:
+
+    find . -type f -exec grep Volume {} \;
+
+This command finds every file starting from `.`. Then it searches each
+file for a line which contains the word "Volume". The `{}` refers to
+the name of each file. The trailing `\;` is used to terminate the
+command.  This command is slow, because it is calling a new instance
+of `grep` for each item the `find` returns.
+
+A faster way to do this is to use the `xargs` command:
+
+    find . -type f -print | xargs grep Volume
+
+`find` generates a list of all the files we are interested in,
+then we pipe them to `xargs`.  `xargs` takes the items given to it
+and passes them as arguments to `grep`.  `xargs` generally only creates
+a single instance of `grep` (or whatever program it is running).
+
+* * * *
+**Short Exercise**
+
+Navigate to the `data` directory. Use one `find` command to perform each
+of the operations listed below (except number 2, which does not
+require a `find` command):
+
+1.  Find any file whose name is "NOTES" within `data` and delete it
+
+2.  Create a new directory called `cleaneddata`
+
+3.  Move all of the files within `data` to the `cleaneddata` directory
+
+4.  Rename all of the files to ensure that they end in `.txt` (note:
+    it is ok for the file name to end in `.txt.txt`
+
+Hint: If you make a mistake and need to start over just do the
+following:
+
+1.  Navigate to the `shell` directory
+
+2.  Delete the `data` directory
+
+3.  Enter the command: `git checkout -- data` You should see that the
+    data directory has reappeared in its original state
+
+**BONUS**
+
+Redo exercise 4, except rename only the files which do not already end
+in `.txt`. You will have to use the `man` command to figure out how to
+search for files which do not match a certain name.
+
+* * * *
+
+
+
+# Bonus material
+
+* Command substitution (`$(command)` and `\`command\``).
+* `xargs`
+* Aliases (`rm -i`)
+* Variables (`PATH`, `PS1`, `PWD`)
+* `.bashrc`
+* `du` (disk usage)
+* `ln` (link)
+* `ssh` and `scp` (secure shell and secure copy)
+* Regular expressions (with `grep`, `sed`, …)
+* Permissions (`ls -l`, `chmod`, `chown`)
+* Chaining commands (pipes, file descriptors, fifos, …)
+
+
+[terminal]: https://en.wikipedia.org/wiki/Terminal_emulator
+[shell]: https://en.wikipedia.org/wiki/Unix_shell
+[Bash]: http://www.gnu.org/software/bash/
+[POSIX]: http://pubs.opengroup.org/onlinepubs/9699919799/idx/shell.html
+[ABSG]: http://tldp.org/LDP/abs/html/
+[cochlear]: exercises/hearing/

diff --git a/setup/README.md b/setup/README.md
new file mode 100644 (file)
index 0000000..0e313e5
--- /dev/null
+++ b/setup/README.md
@@ -0,0 +1 @@
+Assorted tools that help students setup for boot camps.

diff --git a/setup/get-my-ip/get-my-ip.py b/setup/get-my-ip/get-my-ip.py
new file mode 100755 (executable)
index 0000000..6b93ca1
--- /dev/null
+++ b/setup/get-my-ip/get-my-ip.py
@@ -0,0 +1,29 @@
+#!/usr/bin/env python
+
+"""Get your public IP address from a UDP socket connection
+"""
+
+import socket as _socket
+
+
+def get_my_ip(host, port=80):
+    s = _socket.socket(_socket.AF_INET, _socket.SOCK_DGRAM)
+    try:
+        s.connect((host, port))
+        return s.getsockname()[0]
+    finally:
+        s.close()
+
+
+if __name__ == '__main__':
+    import argparse as _argparse
+
+    parser = _argparse.ArgumentParser(description=__doc__)
+    parser.add_argument(
+        'host', default='software-carpentry.org', nargs='?')
+    parser.add_argument(
+        'port', default=80, type=int, nargs='?')
+
+    args = parser.parse_args()
+
+    print(get_my_ip(host=args.host, port=args.port))

diff --git a/setup/installation-test/README.md b/setup/installation-test/README.md
new file mode 100644 (file)
index 0000000..e7c5193
--- /dev/null
+++ b/setup/installation-test/README.md
@@ -0,0 +1,76 @@
+Students
+========
+
+This directory contains scripts for testing your machine to make sure
+you have the software you'll need for your boot camp installed.  See
+the comments at the head of each script for more details, but you'll
+basically want to see something like:
+
+    $ python swc-installation-test-1.py
+    Passed
+    $ python swc-installation-test-2.py
+    check virtual-shell...  pass
+    …
+    Successes:
+
+    virtual-shell Bourne Again Shell (bash) 4.2.37
+    …
+
+If you see something like:
+
+    $ python swc-installation-test-2.py
+    check virtual-shell...  fail
+    …
+    check for command line shell (virtual-shell) failed:
+      command line shell (virtual-shell) requires at least one of the following dependencies
+      For instructions on installing an up-to-date version, see
+      http://software-carpentry.org/setup/
+      causes:
+      check for Bourne Again Shell (bash) failed:
+        could not find 'bash' executable for Bourne Again Shell (bash)
+        For instructions on installing an up-to-date version, see
+        http://software-carpentry.org/setup/
+    …
+
+follow the suggestions to try and install any missing software.  For
+additional troubleshooting information, you can use the `--verbose`
+option:
+
+    $ python swc-installation-test-2.py --verbose
+    check virtual-shell...  fail
+    …
+    ==================
+    System information
+    ==================
+    os.name            : posix
+    …
+
+Instructors
+===========
+
+`swc-installation-test-1.py` is pretty simple, and just checks that
+the students have a recent enough version of Python installed that
+they'll be able to parse `swc-installation-test-2.py`.  The latter
+checks for a list of dependencies and prints error messages if a
+package is not installed, or if the installed version is not current
+enough.  By default, the script checks for pretty much anything that
+has ever been used at a Software Carpentry boot camp, which is
+probably not what you want for your particular boot camp.
+
+Before your boot camp, you should go through
+`swc-installation-test-2.py` and comment any dependencies you don't
+need out of the `CHECKS` list.  You might also want to skim through
+the minimum version numbers listed where particular dependencies are
+defined (e.g. `('git', 'Git', (1, 7, 0), None)`).  For the most part,
+fairly conservative values have been selected, so students with modern
+machines should be fine.  If your boot camp has stricter version
+requirements, feel free to bump them accordingly.
+
+Similarly, the virtual dependencies can be satisfied by any of several
+packages.  If you don't want to support a particular package (e.g. if
+you have no Emacs experience and don't want to be responsible for
+students who show up with Emacs as their only editor), you can comment
+out that particular `or_dependency`.
+
+Finally, don't forget to post your modified scripts somewhere where
+your students can download them!

diff --git a/setup/installation-test/swc-installation-test-1.py b/setup/installation-test/swc-installation-test-1.py
new file mode 100755 (executable)
index 0000000..be027f9
--- /dev/null
+++ b/setup/installation-test/swc-installation-test-1.py
@@ -0,0 +1,56 @@
+#!/usr/bin/env python
+
+"""Test script to check required Python version.
+
+Execute this code at the command line by typing:
+
+  python swc-installation-test-1.py
+
+How to get a command line:
+
+- On OSX run this with the Terminal application.
+
+- On Windows, go to the Start menu, select 'Run' and type 'cmd'
+(without the quotes) to run the 'cmd.exe' Windows Command Prompt.
+
+- On Linux, either use your login shell directly, or run one of a
+  number of graphical terminals (e.g. 'xterm', 'gnome-terminal', ...).
+
+For some screen shots, see:
+
+  http://software-carpentry.org/setup/terminal.html
+
+Run the script and follow the instructions it prints at the end.  If
+you see an error saying that the 'python' command was not found, than
+you may not have any version of Python installed.  See:
+
+  http://www.python.org/download/releases/2.7.3/#download
+
+for installation instructions.
+
+This test is separate to avoid Python syntax errors parsing the more
+elaborate `swc-installation-test-2.py`.
+"""
+
+import sys as _sys
+
+
+__version__ = '0.1'
+
+
+def check():
+    if _sys.version_info < (2, 6):
+        print('check for Python version (python):')
+        print('outdated version of Python: ' + _sys.version)
+        return False
+    return True
+
+
+if __name__ == '__main__':
+    if check():
+        print('Passed')
+    else:
+        print('Failed')
+        print('Install a current version of Python!')
+        print('http://www.python.org/download/releases/2.7.3/#download')
+        _sys.exit(1)

diff --git a/setup/installation-test/swc-installation-test-2.py b/setup/installation-test/swc-installation-test-2.py
new file mode 100755 (executable)
index 0000000..7f55b33
--- /dev/null
+++ b/setup/installation-test/swc-installation-test-2.py
@@ -0,0 +1,939 @@
+#!/usr/bin/env python
+
+"""Test script to check for required functionality.
+
+Execute this code at the command line by typing:
+
+  python swc-installation-test-2.py
+
+Run the script and follow the instructions it prints at the end.
+
+This script requires at least Python 2.6.  You can check the version
+of Python that you have installed with 'swc-installation-test-1.py'.
+
+By default, this script will test for all the dependencies your
+instructor thinks you need.  If you want to test for a different set
+of packages, you can list them on the command line.  For example:
+
+  python swc-installation-test-2.py git virtual-editor
+
+This is useful if the original test told you to install a more recent
+version of a particular dependency, and you just want to re-test that
+dependency.
+"""
+
+from __future__ import print_function  # for Python 2.6 compatibility
+
+import distutils.ccompiler as _distutils_ccompiler
+import fnmatch as _fnmatch
+try:  # Python 2.7 and 3.x
+    import importlib as _importlib
+except ImportError:  # Python 2.6 and earlier
+    class _Importlib (object):
+        """Minimal workarounds for functions we need
+        """
+        @staticmethod
+        def import_module(name):
+            module = __import__(name)
+            for n in name.split('.')[1:]:
+                module = getattr(module, n)
+            return module
+    _importlib = _Importlib()
+import logging as _logging
+import os as _os
+import platform as _platform
+import re as _re
+import shlex as _shlex
+import subprocess as _subprocess
+import sys as _sys
+try:  # Python 3.x
+    import urllib.parse as _urllib_parse
+except ImportError:  # Python 2.x
+    import urllib as _urllib_parse  # for quote()
+
+
+if not hasattr(_shlex, 'quote'):  # Python versions older than 3.3
+    # Use the undocumented pipes.quote()
+    import pipes as _pipes
+    _shlex.quote = _pipes.quote
+
+
+__version__ = '0.1'
+
+# Comment out any entries you don't need
+CHECKS = [
+# Shell
+    'virtual-shell',
+# Editors
+    'virtual-editor',
+# Browsers
+    'virtual-browser',
+# Version control
+    'git',
+    'hg',              # Command line tool
+    #'mercurial',       # Python package
+    'EasyMercurial',
+# Build tools and packaging
+    'make',
+    'virtual-pypi-installer',
+    'setuptools',
+    #'xcode',
+# Testing
+    'nosetests',       # Command line tool
+    'nose',            # Python package
+    'py.test',         # Command line tool
+    'pytest',          # Python package
+# SQL
+    'sqlite3',         # Command line tool
+    'sqlite3-python',  # Python package
+# Python
+    'python',
+    'ipython',         # Command line tool
+    'IPython',         # Python package
+    'argparse',        # Useful for utility scripts
+    'numpy',
+    'scipy',
+    'matplotlib',
+    'pandas',
+    'sympy',
+    'Cython',
+    'networkx',
+    'mayavi.mlab',
+    ]
+
+CHECKER = {}
+
+_ROOT_PATH = _os.sep
+if _platform.system() == 'win32':
+    _ROOT_PATH = 'c:\\'
+
+
+class InvalidCheck (KeyError):
+    def __init__(self, check):
+        super(InvalidCheck, self).__init__(check)
+        self.check = check
+
+    def __str__(self):
+        return self.check
+
+
+class DependencyError (Exception):
+    _default_url = 'http://software-carpentry.org/setup/'
+    _setup_urls = {  # (system, version, package) glob pairs
+        ('*', '*', 'Cython'): 'http://docs.cython.org/src/quickstart/install.html',
+        ('Linux', '*', 'EasyMercurial'): 'http://easyhg.org/download.html#download-linux',
+        ('Darwin', '*', 'EasyMercurial'): 'http://easyhg.org/download.html#download-mac',
+        ('Windows', '*', 'EasyMercurial'): 'http://easyhg.org/download.html#download-windows',
+        ('*', '*', 'EasyMercurial'): 'http://easyhg.org/download.html',
+        ('*', '*', 'argparse'): 'https://pypi.python.org/pypi/argparse#installation',
+        ('*', '*', 'ash'): 'http://www.in-ulm.de/~mascheck/various/ash/',
+        ('*', '*', 'bash'): 'http://www.gnu.org/software/bash/manual/html_node/Basic-Installation.html#Basic-Installation',
+        ('Linux', '*', 'chromium'): 'http://code.google.com/p/chromium/wiki/LinuxBuildInstructions',
+        ('Darwin', '*', 'chromium'): 'http://code.google.com/p/chromium/wiki/MacBuildInstructions',
+        ('Windows', '*', 'chromium'): 'http://www.chromium.org/developers/how-tos/build-instructions-windows',
+        ('*', '*', 'chromium'): 'http://www.chromium.org/developers/how-tos',
+        ('Windows', '*', 'emacs'): 'http://www.gnu.org/software/emacs/windows/Installing-Emacs.html',
+        ('*', '*', 'emacs'): 'http://www.gnu.org/software/emacs/#Obtaining',
+        ('*', '*', 'firefox'): 'http://www.mozilla.org/en-US/firefox/new/',
+        ('Linux', '*', 'gedit'): 'http://www.linuxfromscratch.org/blfs/view/svn/gnome/gedit.html',
+        ('*', '*', 'git'): 'http://git-scm.com/downloads',
+        ('*', '*', 'google-chrome'): 'https://www.google.com/intl/en/chrome/browser/',
+        ('*', '*', 'hg'): 'http://mercurial.selenic.com/',
+        ('*', '*', 'mercurial'): 'http://mercurial.selenic.com/',
+        ('*', '*', 'IPython'): 'http://ipython.org/install.html',
+        ('*', '*', 'ipython'): 'http://ipython.org/install.html',
+        ('*', '*', 'jinja'): 'http://jinja.pocoo.org/docs/intro/#installation',
+        ('*', '*', 'kate'): 'http://kate-editor.org/get-it/',
+        ('*', '*', 'make'): 'http://www.gnu.org/software/make/',
+        ('Darwin', '*', 'matplotlib'): 'http://matplotlib.org/users/installing.html#building-on-osx',
+        ('Windows', '*', 'matplotlib'): 'http://matplotlib.org/users/installing.html#installing-on-windows',
+        ('*', '*', 'matplotlib'): 'http://matplotlib.org/users/installing.html#installing',
+        ('*', '*', 'mayavi.mlab'): 'http://docs.enthought.com/mayavi/mayavi/installation.html',
+        ('*', '*', 'nano'): 'http://www.nano-editor.org/dist/latest/faq.html#3',
+        ('*', '*', 'networkx'): 'http://networkx.github.com/documentation/latest/install.html#installing',
+        ('*', '*', 'nose'): 'https://nose.readthedocs.org/en/latest/#installation-and-quick-start',
+        ('*', '*', 'nosetests'): 'https://nose.readthedocs.org/en/latest/#installation-and-quick-start',
+        ('*', '*', 'notepad++'): 'http://notepad-plus-plus.org/download/v6.3.html',
+        ('*', '*', 'numpy'): 'http://docs.scipy.org/doc/numpy/user/install.html',
+        ('*', '*', 'pandas'): 'http://pandas.pydata.org/pandas-docs/stable/install.html',
+        ('*', '*', 'pip'): 'http://www.pip-installer.org/en/latest/installing.html',
+        ('*', '*', 'pytest'): 'http://pytest.org/latest/getting-started.html',
+        ('*', '*', 'python'): 'http://www.python.org/download/releases/2.7.3/#download',
+        ('*', '*', 'pyzmq'): 'https://github.com/zeromq/pyzmq/wiki/Building-and-Installing-PyZMQ',
+        ('*', '*', 'py.test'): 'http://pytest.org/latest/getting-started.html',
+        ('Linux', '*', 'scipy'): 'http://www.scipy.org/Installing_SciPy/Linux',
+        ('Darwin', '*', 'scipy'): 'http://www.scipy.org/Installing_SciPy/Mac_OS_X',
+        ('Windows', '*', 'scipy'): 'http://www.scipy.org/Installing_SciPy/Windows',
+        ('*', '*', 'scipy'): 'http://www.scipy.org/Installing_SciPy',
+        ('*', '*', 'setuptools'): 'https://pypi.python.org/pypi/setuptools#installation-instructions',
+        ('*', '*', 'sqlite3'): 'http://www.sqlite.org/download.html',
+        ('*', '*', 'sublime-text'): 'http://www.sublimetext.com/2',
+        ('*', '*', 'sympy'): 'http://docs.sympy.org/dev/install.html',
+        ('Darwin', '*', 'textmate'): 'http://macromates.com/',
+        ('Darwin', '*', 'textwrangler'): 'http://www.barebones.com/products/textwrangler/download.html',
+        ('*', '*', 'tornado'): 'http://www.tornadoweb.org/',
+        ('*', '*', 'vim'): 'http://www.vim.org/download.php',
+        ('Darwin', '*', 'xcode'): 'https://developer.apple.com/xcode/',
+        ('*', '*', 'xemacs'): 'http://www.us.xemacs.org/Install/',
+        ('*', '*', 'zsh'): 'http://www.zsh.org/',
+        }
+
+    def _get_message(self):
+        return self._message
+    def _set_message(self, message):
+        self._message = message
+    message = property(_get_message, _set_message)
+
+    def __init__(self, checker, message, causes=None):
+        super(DependencyError, self).__init__(message)
+        self.checker = checker
+        self.message = message
+        if causes is None:
+            causes = []
+        self.causes = causes
+
+    def get_url(self):
+        system = _platform.system()
+        version = None
+        for pversion in (
+            'linux_distribution',
+            'mac_ver',
+            'win32_ver',
+            ):
+            value = getattr(_platform, pversion)()
+            if value[0]:
+                version = value[0]
+                break
+        package = self.checker.name
+        for (s,v,p),url in self._setup_urls.items():
+            if (_fnmatch.fnmatch(system, s) and
+                    _fnmatch.fnmatch(version, v) and
+                    _fnmatch.fnmatch(package, p)):
+                return url
+        return self._default_url
+
+    def __str__(self):
+        url = self.get_url()
+        lines = [
+            'check for {0} failed:'.format(self.checker.full_name()),
+            '  ' + self.message,
+            '  For instructions on installing an up-to-date version, see',
+            '  ' + url,
+            ]
+        if self.causes:
+            lines.append('  causes:')
+            for cause in self.causes:
+                lines.extend('  ' + line for line in str(cause).splitlines())
+        return '\n'.join(lines)
+
+
+def check(checks=None):
+    successes = []
+    failures = []
+    if not checks:
+        checks = CHECKS
+    for check in checks:
+        try:
+            checker = CHECKER[check]
+        except KeyError as e:
+            raise InvalidCheck(check)# from e
+        _sys.stdout.write('check {0}...\t'.format(checker.full_name()))
+        try:
+            version = checker.check()
+        except DependencyError as e:
+            failures.append(e)
+            _sys.stdout.write('fail\n')
+        else:
+            _sys.stdout.write('pass\n')
+            successes.append((checker, version))
+    if successes:
+        print('\nSuccesses:\n')
+        for checker,version in successes:
+            print('{0} {1}'.format(
+                    checker.full_name(),
+                    version or 'unknown'))
+    if failures:
+        print('\nFailures:')
+        printed = []
+        for failure in failures:
+            if failure not in printed:
+                print()
+                print(failure)
+                printed.append(failure)
+        return False
+    return True
+
+
+class Dependency (object):
+    def __init__(self, name, long_name=None, minimum_version=None,
+                 version_delimiter='.', and_dependencies=None,
+                 or_dependencies=None):
+        self.name = name
+        self.long_name = long_name or name
+        self.minimum_version = minimum_version
+        self.version_delimiter = version_delimiter
+        if not and_dependencies:
+            and_dependencies = []
+        self.and_dependencies = and_dependencies
+        if not or_dependencies:
+            or_dependencies = []
+        self.or_dependencies = or_dependencies
+        self._check_error = None
+
+    def __str__(self):
+        return '<{0} {1}>'.format(type(self).__name__, self.name)
+
+    def full_name(self):
+        if self.name == self.long_name:
+            return self.name
+        else:
+            return '{0} ({1})'.format(self.long_name, self.name)
+
+    def check(self):
+        if self._check_error:
+            raise self._check_error
+        try:
+            self._check_dependencies()
+            return self._check()
+        except DependencyError as e:
+            self._check_error = e  # cache for future calls
+            raise
+
+    def _check_dependencies(self):
+        for dependency in self.and_dependencies:
+            if not hasattr(dependency, 'check'):
+                dependency = CHECKER[dependency]
+            try:
+                dependency.check()
+            except DependencyError as e:
+                raise DependencyError(
+                    checker=self,
+                    message=(
+                        'some dependencies for {0} were not satisfied'
+                        ).format(self.full_name()),
+                    causes=[e])
+        self.or_pass = None
+        or_errors = []
+        for dependency in self.or_dependencies:
+            if not hasattr(dependency, 'check'):
+                dependency = CHECKER[dependency]
+            try:
+                version = dependency.check()
+            except DependencyError as e:
+                or_errors.append(e)
+            else:
+                self.or_pass = {
+                    'dependency': dependency,
+                    'version': version,
+                    }
+                break  # no need to test other dependencies
+        if self.or_dependencies and not self.or_pass:
+            raise DependencyError(
+                checker=self,
+                message=(
+                    '{0} requires at least one of the following dependencies'
+                    ).format(self.full_name()),
+                    causes=or_errors)
+
+    def _check(self):
+        version = self._get_version()
+        parsed_version = None
+        if hasattr(self, '_get_parsed_version'):
+            parsed_version = self._get_parsed_version()
+        if self.minimum_version:
+            self._check_version(version=version, parsed_version=parsed_version)
+        return version
+
+    def _get_version(self):
+        raise NotImplementedError(self)
+
+    def _minimum_version_string(self):
+        return self.version_delimiter.join(
+            str(part) for part in self.minimum_version)
+
+    def _check_version(self, version, parsed_version=None):
+        if not parsed_version:
+            parsed_version = self._parse_version(version=version)
+        if not parsed_version or parsed_version < self.minimum_version:
+            raise DependencyError(
+                checker=self,
+                message='outdated version of {0}: {1} (need >= {2})'.format(
+                    self.full_name(), version, self._minimum_version_string()))
+
+    def _parse_version(self, version):
+        if not version:
+            return None
+        parsed_version = []
+        for part in version.split(self.version_delimiter):
+            try:
+                parsed_version.append(int(part))
+            except ValueError as e:
+                raise DependencyError(
+                    checker=self,
+                    message=(
+                        'unparsable {0!r} in version {1} of {2}, (need >= {3})'
+                        ).format(
+                        part, version, self.full_name(),
+                        self._minimum_version_string()))# from e
+        return tuple(parsed_version)
+
+
+class PythonDependency (Dependency):
+    def __init__(self, name='python', long_name='Python version',
+                 minimum_version=(2, 6), **kwargs):
+        super(PythonDependency, self).__init__(
+            name=name, long_name=long_name, minimum_version=minimum_version,
+            **kwargs)
+
+    def _get_version(self):
+        return _sys.version
+
+    def _get_parsed_version(self):
+        return _sys.version_info
+
+
+CHECKER['python'] = PythonDependency()
+
+
+class CommandDependency (Dependency):
+    exe_extension = _distutils_ccompiler.new_compiler().exe_extension
+
+    def __init__(self, command, paths=None, version_options=('--version',),
+                 stdin=None, version_regexp=None, version_stream='stdout',
+                 **kwargs):
+        if 'name' not in kwargs:
+            kwargs['name'] = command
+        super(CommandDependency, self).__init__(**kwargs)
+        self.command = command
+        self.paths = paths
+        self.version_options = version_options
+        self.stdin = None
+        if not version_regexp:
+            regexp = r'([\d][\d{0}]*[\d])'.format(self.version_delimiter)
+            version_regexp = _re.compile(regexp)
+        self.version_regexp = version_regexp
+        self.version_stream = version_stream
+
+    def _get_command_version_stream(self, command=None, stdin=None,
+                                    expect=(0,)):
+        if command is None:
+            command = self.command + (self.exe_extension or '')
+        if not stdin:
+            stdin = self.stdin
+        if stdin:
+            popen_stdin = _subprocess.PIPE
+        else:
+            popen_stdin = None
+        try:
+            p = _subprocess.Popen(
+                [command] + list(self.version_options), stdin=popen_stdin,
+                stdout=_subprocess.PIPE, stderr=_subprocess.PIPE,
+                universal_newlines=True)
+        except OSError as e:
+            raise DependencyError(
+                checker=self,
+                message="could not find '{0}' executable".format(command),
+                )# from e
+        stdout,stderr = p.communicate(stdin)
+        status = p.wait()
+        if status not in expect:
+            lines = [
+                "failed to execute: {0} {1}".format(
+                    command,
+                    ' '.join(_shlex.quote(arg)
+                             for arg in self.version_options)),
+                'status: {0}'.format(status),
+                ]
+            for name,string in [('stdout', stdout), ('stderr', stderr)]:
+                if string:
+                    lines.extend([name + ':', string])
+            raise DependencyError(checker=self, message='\n'.join(lines))
+        for name,string in [('stdout', stdout), ('stderr', stderr)]:
+            if name == self.version_stream:
+                if not string:
+                    raise DependencyError(
+                        checker=self,
+                        message='empty version stream on {0} for {1}'.format(
+                            self.version_stream, command))
+                return string
+        raise NotImplementedError(self.version_stream)
+
+    def _get_version_stream(self, **kwargs):
+        paths = [self.command + (self.exe_extension or '')]
+        if self.exe_extension:
+            paths.append(self.command)  # also look at the extension-less path
+        if self.paths:
+            paths.extend(self.paths)
+        or_errors = []
+        for path in paths:
+            try:
+                return self._get_command_version_stream(command=path, **kwargs)
+            except DependencyError as e:
+                or_errors.append(e)
+        raise DependencyError(
+            checker=self,
+            message='errors finding {0} version'.format(
+                self.full_name()),
+            causes=or_errors)
+
+    def _get_version(self):
+        version_stream = self._get_version_stream()
+        match = self.version_regexp.search(version_stream)
+        if not match:
+            raise DependencyError(
+                checker=self,
+                message='no version string in output:\n{0}'.format(
+                    version_stream))
+        return match.group(1)
+
+
+def _program_files_paths(*args):
+    "Utility for generating MS Windows search paths"
+    pf = _os.environ.get('ProgramFiles', '/usr/bin')
+    pfx86 = _os.environ.get('ProgramFiles(x86)', pf)
+    paths = [_os.path.join(pf, *args)]
+    if pfx86 != pf:
+        paths.append(_os.path.join(pfx86, *args))
+    return paths
+
+
+for command,long_name,minimum_version,paths in [
+        ('sh', 'Bourne Shell', None, None),
+        ('ash', 'Almquist Shell', None, None),
+        ('bash', 'Bourne Again Shell', None, None),
+        ('csh', 'C Shell', None, None),
+        ('ksh', 'KornShell', None, None),
+        ('dash', 'Debian Almquist Shell', None, None),
+        ('tcsh', 'TENEX C Shell', None, None),
+        ('zsh', 'Z Shell', None, None),
+        ('git', 'Git', (1, 7, 0), None),
+        ('hg', 'Mercurial', (2, 0, 0), None),
+        ('EasyMercurial', None, (1, 3), None),
+        ('pip', None, None, None),
+        ('sqlite3', 'SQLite 3', None, None),
+        ('nosetests', 'Nose', (1, 0, 0), None),
+        ('ipython', 'IPython script', (0, 13), None),
+        ('emacs', 'Emacs', None, None),
+        ('xemacs', 'XEmacs', None, None),
+        ('vim', 'Vim', None, None),
+        ('vi', None, None, None),
+        ('nano', 'Nano', None, None),
+        ('gedit', None, None, None),
+        ('kate', 'Kate', None, None),
+        ('notepad++', 'Notepad++', None,
+         _program_files_paths('Notepad++', 'notepad++.exe')),
+        ('firefox', 'Firefox', None,
+         _program_files_paths('Mozilla Firefox', 'firefox.exe')),
+        ('google-chrome', 'Google Chrome', None,
+         _program_files_paths('Google', 'Chrome', 'Application', 'chrome.exe')
+         ),
+        ('chromium', 'Chromium', None, None),
+        ]:
+    if not long_name:
+        long_name = command
+    CHECKER[command] = CommandDependency(
+        command=command, paths=paths, long_name=long_name,
+        minimum_version=minimum_version)
+del command, long_name, minimum_version, paths  # cleanup namespace
+
+
+class MakeDependency (CommandDependency):
+    makefile = '\n'.join([
+            'all:',
+            '\t@echo "MAKE_VERSION=$(MAKE_VERSION)"',
+            '\t@echo "MAKE=$(MAKE)"',
+            '',
+            ])
+
+    def _get_version(self):
+        try:
+            return super(MakeDependency, self)._get_version()
+        except DependencyError as e:
+            version_options = self.version_options
+            self.version_options = ['-f', '-']
+            try:
+                stream = self._get_version_stream(stdin=self.makefile)
+                info = {}
+                for line in stream.splitlines():
+                    try:
+                        key,value = line.split('=', 1)
+                    except ValueError as ve:
+                        raise e# from NotImplementedError(stream)
+                    info[key] = value
+                if info.get('MAKE_VERSION', None):
+                    return info['MAKE_VERSION']
+                elif info.get('MAKE', None):
+                    return None
+                raise e
+            finally:
+                self.version_options = version_options
+
+
+CHECKER['make'] = MakeDependency(command='make', minimum_version=None)
+
+
+class EasyInstallDependency (CommandDependency):
+    def _get_version(self):
+        try:
+            return super(EasyInstallDependency, self)._get_version()
+        except DependencyError as e:
+            version_stream = self.version_stream
+            try:
+                self.version_stream = 'stderr'
+                stream = self._get_version_stream(expect=(1,))
+                if 'option --version not recognized' in stream:
+                    return 'unknown (possibly Setuptools?)'
+            finally:
+                self.version_stream = version_stream
+
+
+CHECKER['easy_install'] = EasyInstallDependency(
+    command='easy_install', long_name='Setuptools easy_install',
+    minimum_version=None)
+
+
+CHECKER['py.test'] = CommandDependency(
+    command='py.test', version_stream='stderr',
+    minimum_version=None)
+
+
+class PathCommandDependency (CommandDependency):
+    """A command that doesn't support --version or equivalent options
+
+    On some operating systems (e.g. OS X), a command's executable may
+    be hard to find, or not exist in the PATH.  Work around that by
+    just checking for the existence of a characteristic file or
+    directory.  Since the characteristic path may depend on OS,
+    installed version, etc., take a list of paths, and succeed if any
+    of them exists.
+    """
+    def _get_command_version_stream(self, *args, **kwargs):
+        raise NotImplementedError()
+
+    def _get_version_stream(self, *args, **kwargs):
+        raise NotImplementedError()
+
+    def _get_version(self):
+        for path in self.paths:
+            if _os.path.exists(path):
+                return None
+        raise DependencyError(
+            checker=self,
+            message=(
+                'nothing exists at any of the expected paths for {0}:\n    {1}'
+                ).format(
+                self.full_name(),
+                '\n    '.join(p for p in self.paths)))
+
+
+for paths,name,long_name in [
+        ([_os.path.join(_ROOT_PATH, 'Applications', 'Sublime Text 2.app')],
+         'sublime-text', 'Sublime Text'),
+        ([_os.path.join(_ROOT_PATH, 'Applications', 'TextMate.app')],
+         'textmate', 'TextMate'),
+        ([_os.path.join(_ROOT_PATH, 'Applications', 'TextWrangler.app')],
+         'textwrangler', 'TextWrangler'),
+        ([_os.path.join(_ROOT_PATH, 'Applications', 'Safari.app')],
+         'safari', 'Safari'),
+        ([_os.path.join(_ROOT_PATH, 'Applications', 'Xcode.app'),  # OS X >=1.7
+          _os.path.join(_ROOT_PATH, 'Developer', 'Applications', 'Xcode.app'
+                        )  # OS X 1.6,
+          ],
+         'xcode', 'Xcode'),
+        ]:
+    if not long_name:
+        long_name = name
+    CHECKER[name] = PathCommandDependency(
+        command=None, paths=paths, name=name, long_name=long_name)
+del paths, name, long_name  # cleanup namespace
+
+
+class PythonPackageDependency (Dependency):
+    def __init__(self, package, **kwargs):
+        if 'name' not in kwargs:
+            kwargs['name'] = package
+        if 'and_dependencies' not in kwargs:
+            kwargs['and_dependencies'] = []
+        if 'python' not in kwargs['and_dependencies']:
+            kwargs['and_dependencies'].append('python')
+        super(PythonPackageDependency, self).__init__(**kwargs)
+        self.package = package
+
+    def _get_version(self):
+        package = self._get_package(self.package)
+        return self._get_version_from_package(package)
+
+    def _get_package(self, package):
+        try:
+            return _importlib.import_module(package)
+        except ImportError as e:
+            raise DependencyError(
+                checker=self,
+                message="could not import the '{0}' package for {1}".format(
+                    package, self.full_name()),
+                )# from e
+
+    def _get_version_from_package(self, package):
+        try:
+            version = package.__version__
+        except AttributeError:
+            version = None
+        return version
+
+
+for package,name,long_name,minimum_version,and_dependencies in [
+        ('nose', None, 'Nose Python package',
+         CHECKER['nosetests'].minimum_version, None),
+        ('pytest', None, 'pytest Python package',
+         CHECKER['py.test'].minimum_version, None),
+        ('jinja2', 'jinja', 'Jinja', (2, 6), None),
+        ('zmq', 'pyzmq', 'PyZMQ', (2, 1, 4), None),
+        ('IPython', None, 'IPython Python package',
+         CHECKER['ipython'].minimum_version, ['jinja', 'tornado', 'pyzmq']),
+        ('argparse', None, 'Argparse', None, None),
+        ('numpy', None, 'NumPy', None, None),
+        ('scipy', None, 'SciPy', None, None),
+        ('matplotlib', None, 'Matplotlib', None, None),
+        ('pandas', None, 'Pandas', (0, 8), None),
+        ('sympy', None, 'SymPy', None, None),
+        ('Cython', None, None, None, None),
+        ('networkx', None, 'NetworkX', None, None),
+        ('mayavi.mlab', None, 'MayaVi', None, None),
+        ('setuptools', None, 'Setuptools', None, None),
+        ]:
+    if not name:
+        name = package
+    if not long_name:
+        long_name = name
+    kwargs = {}
+    if and_dependencies:
+        kwargs['and_dependencies'] = and_dependencies
+    CHECKER[name] = PythonPackageDependency(
+        package=package, name=name, long_name=long_name,
+        minimum_version=minimum_version, **kwargs)
+# cleanup namespace
+del package, name, long_name, minimum_version, and_dependencies, kwargs
+
+
+class MercurialPythonPackage (PythonPackageDependency):
+    def _get_version(self):
+        try:  # mercurial >= 1.2
+            package = _importlib.import_module('mercurial.util')
+        except ImportError as e:  # mercurial <= 1.1.2
+            package = self._get_package('mercurial.version')
+            return package.get_version()
+        else:
+            return package.version()
+
+
+CHECKER['mercurial'] = MercurialPythonPackage(
+    package='mercurial.util', name='mercurial',
+    long_name='Mercurial Python package',
+    minimum_version=CHECKER['hg'].minimum_version)
+
+
+class TornadoPythonPackage (PythonPackageDependency):
+    def _get_version_from_package(self, package):
+        return package.version
+
+    def _get_parsed_version(self):
+        package = self._get_package(self.package)
+        return package.version_info
+
+
+CHECKER['tornado'] = TornadoPythonPackage(
+    package='tornado', name='tornado', long_name='Tornado', minimum_version=(2, 0))
+
+
+class SQLitePythonPackage (PythonPackageDependency):
+    def _get_version_from_package(self, package):
+        return _sys.version
+
+    def _get_parsed_version(self):
+        return _sys.version_info
+
+
+CHECKER['sqlite3-python'] = SQLitePythonPackage(
+    package='sqlite3', name='sqlite3-python',
+    long_name='SQLite Python package',
+    minimum_version=CHECKER['sqlite3'].minimum_version)
+
+
+class UserTaskDependency (Dependency):
+    "Prompt the user to complete a task and check for success"
+    def __init__(self, prompt, **kwargs):
+        super(UserTaskDependency, self).__init__(**kwargs)
+        self.prompt = prompt
+
+    def _check(self):
+        if _sys.version_info >= (3, ):
+            result = input(self.prompt)
+        else:  # Python 2.x
+            result = raw_input(self.prompt)
+        return self._check_result(result)
+
+    def _check_result(self, result):
+        raise NotImplementedError()
+
+
+class EditorTaskDependency (UserTaskDependency):
+    def __init__(self, **kwargs):
+        self.path = _os.path.expanduser(_os.path.join(
+                '~', 'swc-installation-test.txt'))
+        self.contents = 'Hello, world!'
+        super(EditorTaskDependency, self).__init__(
+            prompt=(
+                'Open your favorite text editor and create the file\n'
+                '  {0}\n'
+                'containing the line:\n'
+                '  {1}\n'
+                'Press enter here after you have done this.\n'
+                'You may remove the file after you have finished testing.'
+                ).format(self.path, self.contents),
+            **kwargs)
+
+    def _check_result(self, result):
+        message = None
+        try:
+            with open(self.path, 'r') as f:
+                contents = f.read()
+        except IOError as e:
+            raise DependencyError(
+                checker=self,
+                message='could not open {0!r}: {1}'.format(self.path, e)
+                )# from e
+        if contents.strip() != self.contents:
+            raise DependencyError(
+                checker=self,
+                message=(
+                    'file contents ({0!r}) did not match the expected {1!r}'
+                    ).format(contents, self.contents))
+
+
+CHECKER['other-editor'] = EditorTaskDependency(
+    name='other-editor', long_name='')
+
+
+class VirtualDependency (Dependency):
+    def _check(self):
+        return '{0} {1}'.format(
+            self.or_pass['dependency'].full_name(),
+            self.or_pass['version'])
+
+
+for name,long_name,dependencies in [
+        ('virtual-shell', 'command line shell', (
+            'bash',
+            'dash',
+            'ash',
+            'zsh',
+            'ksh',
+            'csh',
+            'tcsh',
+            'sh',
+            )),
+        ('virtual-editor', 'text/code editor', (
+            'emacs',
+            'xemacs',
+            'vim',
+            'vi',
+            'nano',
+            'gedit',
+            'kate',
+            'notepad++',
+            'sublime-text',
+            'textmate',
+            'textwrangler',
+            'other-editor',  # last because it requires user interaction
+            )),
+        ('virtual-browser', 'web browser', (
+            'firefox',
+            'google-chrome',
+            'chromium',
+            'safari',
+            )),
+        ('virtual-pypi-installer', 'PyPI installer', (
+            'easy_install',
+            'pip',
+            )),
+        ]:
+    CHECKER[name] = VirtualDependency(
+        name=name, long_name=long_name, or_dependencies=dependencies)
+del name, long_name, dependencies  # cleanup namespace
+
+
+def _print_info(key, value, indent=19):
+    print('{0}{1}: {2}'.format(key, ' '*(indent-len(key)), value))
+
+def print_system_info():
+    print("If you do not understand why the above failures occurred,")
+    print("copy and send the *entire* output (all info above and summary")
+    print("below) to the instructor for help.")
+    print()
+    print('==================')
+    print('System information')
+    print('==================')
+    _print_info('os.name', _os.name)
+    _print_info('os.uname', _platform.uname())
+    _print_info('platform', _sys.platform)
+    _print_info('platform+', _platform.platform())
+    for pversion in (
+            'linux_distribution',
+            'mac_ver',
+            'win32_ver',
+            ):
+        value = getattr(_platform, pversion)()
+        if value[0]:
+            _print_info(pversion, value)
+    _print_info('prefix', _sys.prefix)
+    _print_info('exec_prefix', _sys.exec_prefix)
+    _print_info('executable', _sys.executable)
+    _print_info('version_info', _sys.version_info)
+    _print_info('version', _sys.version)
+    _print_info('environment', '')
+    for key,value in sorted(_os.environ.items()):
+        print('  {0}={1}'.format(key, value))
+    print('==================')
+
+def print_suggestions(instructor_fallback=True):
+    print()
+    print('For suggestions on installing missing packages, see')
+    print('http://software-carpentry.org/setup/')
+    print('')
+    print('For instructings on installing a particular package,')
+    print('see the failure message for that package printed above.')
+    if instructor_fallback:
+        print('')
+        print('For help, email the *entire* output of this script to')
+        print('your instructor.')
+
+
+if __name__ == '__main__':
+    import optparse as _optparse
+
+    parser = _optparse.OptionParser(usage='%prog [options] [check...]')
+    epilog = __doc__
+    parser.format_epilog = lambda formatter: '\n' + epilog
+    parser.add_option(
+        '-v', '--verbose', action='store_true',
+        help=('print additional information to help troubleshoot '
+              'installation issues'))
+    options,args = parser.parse_args()
+    try:
+        passed = check(args)
+    except InvalidCheck as e:
+        print("I don't know how to check for {0!r}".format(e.check))
+        print('I do know how to check for:')
+        for key,checker in sorted(CHECKER.items()):
+            if checker.long_name != checker.name:
+                print('  {0} {1}({2})'.format(
+                        key, ' '*(20-len(key)), checker.long_name))
+            else:
+                print('  {0}'.format(key))
+        _sys.exit(1)
+    if not passed:
+        if options.verbose:
+            print()
+            print_system_info()
+            print_suggestions(instructor_fallback=True)
+        _sys.exit(1)

diff --git a/setup/windows-installer/swc-windows-installer.py b/setup/windows-installer/swc-windows-installer.py
new file mode 100755 (executable)
index 0000000..041642a
--- /dev/null
+++ b/setup/windows-installer/swc-windows-installer.py
@@ -0,0 +1,118 @@
+#!/usr/bin/env python
+
+"""Software Carpentry Windows Installer
+
+Helps mimic a *nix environment on Windows with as little work as possible.
+
+The script:
+* Installs nano and makes it accessible from msysgit
+* Provides standard nosetests behavior for msysgit
+
+To use:
+
+1. Install Python, IPython, and Nose.  An easy way to do this is with
+   the Anaconda CE Python distribution
+   http://continuum.io/anacondace.html
+2. Install msysgit
+   http://code.google.com/p/msysgit/downloads/list?q=full+installer+official+git
+3. Run swc_windows_installer.py
+   You should be able to simply double click the file in Windows
+
+"""
+
+import hashlib
+try:  # Python 3
+    from io import BytesIO as _BytesIO
+except ImportError:  # Python 2
+    from StringIO import StringIO as _BytesIO
+import os
+import re
+try:  # Python 3
+    from urllib.request import urlopen as _urlopen
+except ImportError:  # Python 2
+    from urllib2 import urlopen as _urlopen
+import zipfile
+
+
+def zip_install(url, sha1, install_directory):
+    """Download and install a zipped bundle of compiled software"""
+    r = _urlopen(url)
+    zip_bytes = r.read()
+    download_sha1 = hashlib.sha1(zip_bytes).hexdigest()
+    if download_sha1 != sha1:
+        raise ValueError(
+            'downloaded {!r} has the wrong SHA1 hash: {} != {}'.format(
+                url, downloaded_sha1, sha1))
+    zip_io = _BytesIO(zip_bytes)
+    zip_file = zipfile.ZipFile(zip_io)
+    if not os.path.isdir(install_directory):
+        os.makedirs(install_directory)
+        zip_file.extractall(install_directory)
+
+
+def install_nano(install_directory):
+    """Download and install the nano text editor"""
+    zip_install(
+        url='http://www.nano-editor.org/dist/v2.2/NT/nano-2.2.6.zip',
+        sha1='f5348208158157060de0a4df339401f36250fe5b',
+        install_directory=install_directory)
+
+
+def create_nosetests_entry_point(python_scripts_directory):
+    """Creates a terminal-based nosetests entry point for msysgit"""
+    contents = '\n'.join([
+            '#!/usr/bin/env/ python',
+            'import sys',
+            'import nose',
+            "if __name__ == '__main__':",
+            '    sys.exit(nose.core.main())',
+            '',
+            ])
+    if not os.path.isdir(python_scripts_directory):
+        os.makedirs(python_scripts_directory)
+    with open(os.path.join(python_scripts_directory, 'nosetests'), 'w') as f:
+        f.write(contents)
+
+
+def update_bash_profile(extra_paths=()):
+    """Create or append to a .bash_profile for Software Carpentry
+
+    Adds nano to the path, sets the default editor to nano, and adds
+    additional paths for other executables.
+    """
+    lines = [
+        '',
+        '# Add paths for Software-Carpentry-installed scripts and executables',
+        'export PATH=$PATH:{}'.format(':'.join(
+            make_posix_path(path) for path in extra_paths),),
+        '',
+        '# Make nano the default editor',
+        'export EDITOR=nano',
+        '',
+        ]
+    config_path = os.path.join(os.path.expanduser('~'), '.bash_profile')
+    with open(config_path, 'a') as f:
+        f.write('\n'.join(lines))
+
+
+def make_posix_path(windows_path):
+    """Convert a Windows path to a posix path"""
+    for regex, sub in [
+            (re.compile(r'\\'), '/'),
+            (re.compile('^[Cc]:'), '/c'),
+            ]:
+        windows_path = regex.sub(sub, windows_path)
+    return windows_path
+
+
+def main():
+    swc_dir = os.path.join(os.path.expanduser('~'), '.swc')
+    bin_dir = os.path.join(swc_dir, 'bin')
+    create_nosetests_entry_point(python_scripts_directory=bin_dir)
+    nano_dir = os.path.join(swc_dir, 'lib', 'nano')
+    install_nano(install_directory=nano_dir)
+    update_bash_profile(extra_paths=(nano_dir, bin_dir))
+
+
+if __name__ == '__main__':
+    main()

diff --git a/version-control/README.md b/version-control/README.md
new file mode 100644 (file)
index 0000000..6d488f9
--- /dev/null
+++ b/version-control/README.md
@@ -0,0 +1,113 @@
+Version control is a way to keep a track of changing files and store a
+history of those changes and the motivation behind them.  This
+organized history allows many people in a collaboration to make
+changes concurrently, while staying up to date with changes made by
+their collaborators.  It also makes it easy to keep yourself organized
+if you store similar files in several different locations (e.g. a
+project that you develop on both your home computer and your work
+computer).
+
+Basic use
+=========
+
+Learning objectives
+-------------------
+
+* Draw a diagram showing the places version control stores
+  information.
+* Check out a working copy of a repository.
+* View the history of changes to a project.
+* Add files to a project.
+* Commit changes made to the working copy.
+* Get changes from an upstream repository.
+* Compare the current state of a working copy to the most recent
+  update from the upstream repository.
+* Explain what "version 123 of `xyz.txt`" actually means.
+
+Key points
+----------
+
+* Version control is a better way to manage shared files than email or
+  shared folders.
+* People share their changes by committing them to public repositories
+  and fetch other's changes by updating their local copy from public
+  repositories.
+* The version control system prevents people from overwriting each
+  other's work by making merges explicit.
+* It also keeps a complete history of changes made to the master so
+  that old versions can be recovered reliably.
+* Version control systems work best with text files, but can also
+  handle binary files such as images and Word documents.
+* Every repository is identified by a URL.
+* Each change to the master copy is identified by a unique revision
+  ID.
+* Revisions identify snapshots of the entire repository, not changes
+  to individual files.
+* Each change should be commented to make the history more readable.
+* Commits are transactions: either all changes are successfully
+  committed, or none are.
+
+Merging conflicts
+=================
+
+Learning objectives
+-------------------
+
+* Explain what causes conflicts to occur and how to tell when one has
+  occurred.
+* Resolve a conflict.
+
+Key points
+----------
+
+* Conflicts must be resolved before a commit can be completed.
+* Most version control systems put markers in text files to show
+  regions of conflict.
+
+Recovering old versions
+=======================
+
+Learning objectives
+-------------------
+
+* Discard changes made to a working copy.
+* Recover an old version of a file.
+* Explain what branches are and when they are used.
+
+Key points
+----------
+
+* Recovering an old version of a file may not erase the intervening
+  changes.
+* Use branches to support parallel independent development.
+
+Setting up a repository
+=======================
+
+Learning objectives
+-------------------
+
+* How to create a repository.
+
+Key points
+----------
+
+* Repositories can be hosted locally, on local (departmental) servers,
+  on hosting services, or on their owners' own domains.
+
+Provenance
+==========
+
+Learning objectives
+-------------------
+
+* What data provenance is.
+* How to embed version numbers and other information in files managed
+  by version control.
+* How to record version information about a program in its output.
+
+Key points
+----------
+
+* Put version numbers in programs' output to establish provenance for
+  data.

diff --git a/version-control/cheat-sheet.md b/version-control/cheat-sheet.md
new file mode 100644 (file)
index 0000000..94d1ba3
--- /dev/null
+++ b/version-control/cheat-sheet.md
@@ -0,0 +1,20 @@
+Basic use
+=========
+
+Merging
+=======
+
+Comparing changes
+=================
+
+Browsing history
+================
+
+Recovering old versions
+=======================
+
+Setting up a repository
+=======================
+
+Provenance
+==========

diff --git a/version-control/instructor.md b/version-control/instructor.md
new file mode 100644 (file)
index 0000000..6dd826c
--- /dev/null
+++ b/version-control/instructor.md
@@ -0,0 +1,46 @@
+Version control is the most important practical skill we introduce.
+By the end of 90 minutes, the instructor should be able to get
+learners to fetch upstream updates, make local edits, and submit their
+changes upstream and why that's a good way to structure development.
+
+Provided there aren't network problems, this entire lesson can be
+covered in 90 minutes.
+
+Tool choices
+============
+
+There are many version control tools available, and we have Software
+Carpentry branches for some of them.  Possible choices:
+
+Git
+---
+
+* `git://github.com/wking/swc-boot-camps.git version-control-git`
+
+Subversion
+----------
+
+* `git://github.com/wking/swc-boot-camps.git version-control-svn`
+
+Teaching notes
+==============
+
+* Make sure the network is working *before* starting this lesson.
+
+* Give learners a ten-minute overview of what version control does for
+  them before diving into the watch-and-do practicals.  Most of them
+  will have tried to co-author papers by emailing files back and
+  forth, or will have biked into the office only to realize that the
+  USB key with last night's work is still on the kitchen table.
+  Instructors can also make jokes about directories with names like
+  "final version", "final version revised", "final version with
+  reviewer three's corrections", "really final version", and, "come on
+  this really has to be the last version" to motivate version control
+  as a better way to collaborate and as a better way to back work up.
+
+* Learners could do most exercises with repositories on their own
+  machines, but it's hard for them to see how version control helps
+  collaboration unless they're sharing a repository with other
+  learners.  In particular, showing learners who changed what using
+  `blame` is only compelling if a file has been edited by at least two
+  people.

diff --git a/version-control/svn/README.md b/version-control/svn/README.md
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+In addition to the generic version control objectives and points.
+
+Basic use
+=========
+
+Learning objectives
+-------------------
+
+* Explain why working copies of different projects should not overlap.
+
+Key points
+----------
+
+* The master copy is stored in a repository.
+* Nobody ever edits the master directory: instead, each person edits a
+  local working copy.
+* The basic workflow for version control is update-change-commit.
+* `svn add <em>things</em>` tells Subversion to start managing
+  particular files or directories.
+* `svn checkout $URL` checks out a working copy of a repository.
+* `svn commit -m "$MESSAGE" $THINGS` sends changes to the repository.
+* `svn diff` compares the current state of a working copy to the state
+  after the most recent update.
+* `svn diff -r HEAD` compares the current state of a working copy to
+  the state of the master copy.
+* `svn history` shows the history of a working copy.
+* `svn status` shows the status of a working copy.
+* `svn update` updates a working copy from the repository.
+
+Merging conflicts
+=================
+
+Learning objectives
+-------------------
+
+* Identify the auxiliary files created when a conflict occurs.
+
+Key points
+----------
+
+* For each conflicted file, Subversion creates auxiliary files
+  containing the common parent, the master version, and the local
+  version.
+* `svn resolve $FILES` tells Subversion that conflicts have been
+  resolved.
+
+Recovering old versions
+=======================
+
+Key points
+----------
+
+* Old versions of files can be recovered by merging their old state
+  with their current state.
+* Recovering an old version of a file does not erase the intervening
+  changes.
+* `svn revert` undoes local changes to files.
+* `svn merge` merges two revisions of a file.
+
+Setting up a repository
+=======================
+
+Key points
+----------
+
+* `svnadmin create $NAME` creates a new repository.
+
+Provenance
+==========
+
+Key points
+----------
+
+* `$Keyword: …$` in a file can be filled in with a property value each
+  time the file is committed.
+* `svn propset svn:keywords $PROPERTY $FILES` tells Subversion to
+  start filling in property values.

diff --git a/version-control/svn/instructor.md b/version-control/svn/instructor.md
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+In addition to the generic version control notes.
+
+The example at the end showing how to use Subversion keywords to track
+provenance is the "ah ha!" moment for many learners.  If time is
+short, skip the material on recovering old versions of files in order
+to get to this section instead.  (The fact that provenance is harder
+in Git, both mechanically and conceptually, is one reason to keep
+teaching Subversion.)
+
+Teaching notes
+--------------
+
+* Version control is typically taught after the shell, so collect
+  learners' names during that session and create a repository for them
+  to share with their names as both their IDs and their passwords.
+  The easiest way to create the repository is to use a server managed
+  by an ISP such as Dreamhost, or on SourceForge, Google Code, or some
+  other "forge" site, all of which provide web interfaces for
+  repository creation and management.  If your learners are advanced
+  enough to be using SSH, you can instead create it on any server they
+  can access, and connect with the `svn+ssh` protocol instead of
+  HTTPS.
+
+* Be very clear what files learners are to edit and what user IDs they
+  are to use when giving instructions.  It is common for them to edit
+  the instructor's biography, or to use the instructor's user ID and
+  password when committing.  Be equally clear *when* they are to edit
+  things: it's also common for someone to edit the file the instructor
+  is editing and commit changes while the instructor is explaining
+  what's going on, so that a conflict occurs when the instructor comes
+  to commit the file.
+
+* If some learners are using Windows, there will inevitably be issues
+  merging files with different line endings.  `svn diff -x -w` is
+  supposed to suppress differences in whitespace, but we have found
+  that it doesn't always work as advertised.