Makefile

   1 SRC = media/src
   2 DEST = media/build
   3
   4 # full-sized image dimensions
   5 WIDTH = 960
   6 HEIGHT = 480
   7
   8 HALF_WIDTH = 480
   9 HALF_HEIGHT = 240
  10
  11 THIRD_WIDTH = 320
  12 THIRD_HEIGHT = 160
  13
  14 THUMBNAILS = \
  15         $(DEST)/1TIT-atoms.mp4 \
  16         $(DEST)/takamori-fig4b-fw-fh.png \
  17         $(DEST)/skeletal-muscle-fw-fh.png \
  18         $(DEST)/titin-fw-fh.png \
  19         $(DEST)/1TIT-fw-fh.png \
  20         $(DEST)/1TIT-tw-th.png \
  21         $(DEST)/pirchi-fig1-fw-hh.png \
  22         $(DEST)/afm-3d-fw-fh.png \
  23         $(DEST)/contact-afm.ogv \
  24         $(DEST)/afm-fw-fh.png \
  25         $(DEST)/afm-hw-hh.png \
  26         $(DEST)/piezo-fw-fh.png \
  27         $(DEST)/unfolding-fw-fh.png \
  28         $(DEST)/unfolding-hw-fh.png \
  29         $(DEST)/unfolding-hw-hh.png \
  30         $(DEST)/expt-sawtooth-fw-fh.png \
  31         $(DEST)/expt-sawtooth-hw-hh.png \
  32         $(DEST)/carrion-vazquez-fig2-fw-fh.png \
  33         $(DEST)/lu-fig1-fw-fh.png \
  34         $(DEST)/apparatus-fw-fh.png \
  35         $(DEST)/labview-fw-fh.png \
  36         $(DEST)/pyafm-fw-fh.png \
  37         $(DEST)/pyafm-hw-hh.png \
  38         $(DEST)/ants-fw-fh.png \
  39         $(DEST)/cantilever.jpg \
  40         $(DEST)/tip.jpg \
  41         $(DEST)/calibcant-flow-hw-fh.png \
  42         $(DEST)/vibration-fw-fh.png \
  43         $(DEST)/vibration-hw-fh.png \
  44         $(DEST)/bump-fw-fh.png \
  45         $(DEST)/florin-fig2-hw-fh.png \
  46         $(DEST)/pbs-hist-hw-hh.png \
  47         $(DEST)/sawsim-states-hw-fh.png \
  48         $(DEST)/sawsim-states-hw-hh.png \
  49         $(DEST)/monte-carlo-fw-fh.png \
  50         $(DEST)/landscape-hw-hh.png \
  51         $(DEST)/landscape-hw-fh.png \
  52         $(DEST)/landscape-bell-hw-hh.png \
  53         $(DEST)/kramers-integrand-hw-hh.png \
  54         $(DEST)/wlc-model-hw-fh.png \
  55         $(DEST)/fjc-model-hw-fh.png \
  56         $(DEST)/fit-valley-fw-fh.png \
  57         $(DEST)/1TIT-hbond-fw-fh.png \
  58         $(DEST)/fit-valley-PBS-hw-hh.png \
  59         $(DEST)/fit-valley-PBS-0.5M-CaCl2-hw-hh.png \
  60         $(DEST)/pbs-0.5M-CaCl2-hist-fw-fh.png
  61
  62 #       $(DEST)/landscape-cant-hw-hh.png
  63
  64 .PRECIOUS: $(DEST)/% $(DEST)/%.png $(DEST)/%.pdf
  65
  66 all: index.html $(THUMBNAILS)
  67
  68 clean:
  69         rm -f index.html $(DEST)/* $(SRC)/pymol/*-0*.png
  70
  71 %: %.itex
  72         itex2MML < "$(<)" > "$(@)"
  73
  74 ## Get the high-resolution source into PNG format
  75
  76 # plain copy
  77 $(DEST)/%: $(SRC)/binary/%
  78         cp "$(<)" "$(@)"
  79
  80 # TODO: re-render and crop?
  81 $(DEST)/%: $(SRC)/matplotlib/%
  82         cp "$(<)" "$(@)"
  83
  84 # TODO: re-render and crop?
  85 $(DEST)/%: $(SRC)/tikz/%
  86         cp "$(<)" "$(@)"
  87
  88 # TODO: extract from the VI?  (probably not ;)
  89 $(DEST)/%: $(SRC)/labview/%
  90         cp "$(<)" "$(@)"
  91
  92 # convert JPEGs
  93 $(DEST)/%.png: $(SRC)/binary/%.jpg
  94         convert "$(<)" "$(@)"
  95
  96 # convert PDFs
  97 $(DEST)/%.png: $(SRC)/binary/%.pdf
  98         convert -density 350 "$(<)" "$(@)"
  99
 100 # compile Asymptote graphics
 101 $(DEST)/%.pdf: $(SRC)/asy/%.asy
 102         asy -noprc -render=0 -f pdf -cd "$(<D)" -o "$(*).pdf" "$(*).asy"
 103         mv "$(<D)/$(*).pdf" "$(@)"
 104
 105 # convert Asympote PDFs
 106 $(DEST)/%.png: $(DEST)/%.pdf
 107         convert -density 350 "$(<)" "$(@)"
 108
 109 # convert PyMol images
 110 $(DEST)/%.png: $(SRC)/pymol/%.pml
 111         cd "$(SRC)/pymol" && pymol -cq "$(*).pml"
 112         mv "$(SRC)/pymol/$(*).png" "$(@)"
 113
 114 # convert PyMol images
 115 $(DEST)/%.mp4: $(SRC)/pymol/%.pml
 116         cd "$(SRC)/pymol" && pymol -cq "$(*).pml"
 117         ffmpeg -y -r 20 -i "$(SRC)/pymol/$(*)-%4d.png" -s 640x480 -vcodec libx264 \
 118                 -preset slower -vpre ipod640 -b:v 800k -bt 800k -aspect 640:480 \
 119                 -threads 0 "$(@)"
 120
 121 ## Convert to the desired geometry
 122
 123 # full width, full height
 124 $(DEST)/%-fw-fh.png: $(DEST)/%.png
 125         convert -format png -strip -quality 95 "$(<)" -thumbnail $(WIDTH)x$(HEIGHT) "$(@)"
 126
 127 # half width, full height
 128 $(DEST)/%-hw-fh.png: $(DEST)/%.png
 129         convert -format png -strip -quality 95 "$(<)" -thumbnail $(HALF_WIDTH)x$(HEIGHT) "$(@)"
 130
 131 # full width, half height
 132 $(DEST)/%-fw-hh.png: $(DEST)/%.png
 133         convert -format png -strip -quality 95 "$(<)" -thumbnail $(WIDTH)x$(HALF_HEIGHT) "$(@)"
 134
 135 # half width, half height
 136 $(DEST)/%-hw-hh.png: $(DEST)/%.png
 137         convert -format png -strip -quality 95 "$(<)" -thumbnail $(HALF_WIDTH)x$(HALF_HEIGHT) "$(@)"
 138
 139 # third width, third height
 140 $(DEST)/%-tw-th.png: $(DEST)/%.png
 141         convert -format png -strip -quality 95 "$(<)" -thumbnail $(THIRD_WIDTH)x$(THIRD_HEIGHT) "$(@)"