Replace .config rather than reconstructing plugins, drivers, and UIs.

[hooke.git] / hooke / experiment.py

diff --git a/hooke/experiment.py b/hooke/experiment.py
index 3d29c75266ea1a8369e9b8e9dc1821b8afc7476b..81decf943971a269fcc6c067718904bf18f41540 100644 (file)
--- a/hooke/experiment.py
+++ b/hooke/experiment.py
@@ -2,15 +2,15 @@
 #
 # This file is part of Hooke.
 #
-# Hooke is free software: you can redistribute it and/or
-# modify it under the terms of the GNU Lesser General Public
-# License as published by the Free Software Foundation, either
-# version 3 of the License, or (at your option) any later version.
+# Hooke is free software: you can redistribute it and/or modify it
+# under the terms of the GNU Lesser General Public License as
+# published by the Free Software Foundation, either version 3 of the
+# License, or (at your option) any later version.
 #
-# Hooke is distributed in the hope that it will be useful,
-# but WITHOUT ANY WARRANTY; without even the implied warranty of
-# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
-# GNU Lesser General Public License for more details.
+# Hooke is distributed in the hope that it will be useful, but WITHOUT
+# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY
+# or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU Lesser General
+# Public License for more details.
 #
 # You should have received a copy of the GNU Lesser General Public
 # License along with Hooke.  If not, see
@@ -28,10 +28,34 @@ class Experiment (object):
     pass
 
 class ForceClamp (Experiment):
-    """Constant force experiments.
+    """Constant force force spectroscopy [#fernandez2004]_.
+
+    .. [#fernandez2004] J.M. Fernandez, H. Li.
+      "Force-Clamp Spectroscopy Monitors the Folding Trajectory of a
+      Single Protein."
+      Science, 2004.
+      doi: `10.1126/science.1092497 <http://dx.doi.org/10.1126/science.1092497>`_
     """
     pass
 
 class VelocityClamp (Experiment):
-    """Constant piezo velocity experiments.
+    """Constant piezo velocity force spectroscopy [#rief1997]_.
+    
+    .. [#rief1997] M. Rief, M. Gautel, F. Oesterhelt, J.M. Fernandez,
+      H.E. Gaub.
+      "Reversible Unfolding of Individual Titin Immunoglobulin Domains by AFM."
+      Science, 1997.
+      doi: `10.1126/science.276.5315.1109 <http://dx.doi.org/10.1126/science.276.5315.1109>`_
+    """
+    pass
+
+class TwoColorCoincidenceDetection (Experiment):
+    """Two-color fluorescence coincidence spectroscopy [#clarke2007]_.
+
+    .. [#clarke2007] R.W. Clarke, A. Orte, D. Klenerman.
+      "Optimized Threshold Selection for Single-Molecule Two-Color
+      Fluorescence Coincidence Spectroscopy."
+      Anal. Chem., 2007.
+      doi: `10.1021/ac062188w <http://dx.doi.org/10.1021/ac062188w>`_
     """
+    pass