From ea534da76ac5d12abe47aaa339362e4ed563c0b6 Mon Sep 17 00:00:00 2001
From: Andrey Kislyuk <weaver@gentoo.org>
Date: Mon, 1 Aug 2011 15:57:50 +0000
Subject: [PATCH] Version bump

Package-Manager: portage-2.2.0_alpha45/cvs/Linux x86_64
---
 sci-visualization/circos/ChangeLog          |  9 ++++--
 sci-visualization/circos/Manifest           | 14 +++++++-
 sci-visualization/circos/circos-0.55.ebuild | 36 +++++++++++++++++++++
 3 files changed, 56 insertions(+), 3 deletions(-)
 create mode 100644 sci-visualization/circos/circos-0.55.ebuild

diff --git a/sci-visualization/circos/ChangeLog b/sci-visualization/circos/ChangeLog
index 5f4148416125..b904cd1373ef 100644
--- a/sci-visualization/circos/ChangeLog
+++ b/sci-visualization/circos/ChangeLog
@@ -1,6 +1,11 @@
 # ChangeLog for sci-visualization/circos
-# Copyright 1999-2010 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-visualization/circos/ChangeLog,v 1.1 2010/05/01 20:33:15 weaver Exp $
+# Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2
+# $Header: /var/cvsroot/gentoo-x86/sci-visualization/circos/ChangeLog,v 1.2 2011/08/01 15:57:50 weaver Exp $
+
+*circos-0.55 (01 Aug 2011)
+
+  01 Aug 2011; Andrey Kislyuk <weaver@gentoo.org> +circos-0.55.ebuild:
+  Version bump
 
 *circos-0.52 (01 May 2010)
 
diff --git a/sci-visualization/circos/Manifest b/sci-visualization/circos/Manifest
index 338c17be9b96..632ee3d6e8ed 100644
--- a/sci-visualization/circos/Manifest
+++ b/sci-visualization/circos/Manifest
@@ -1,4 +1,16 @@
+-----BEGIN PGP SIGNED MESSAGE-----
+Hash: SHA1
+
 DIST circos-0.52.tgz 43523958 RMD160 afe78f2fb972f14b399135f927d6dfa3e2b1e9e4 SHA1 738a3250ed969a2ee894aa5666fd2913d05d0a14 SHA256 ec38a6f7ea7d25eca887f9d696e101801498ad78db2dd012dfc0605f3d7d0f96
+DIST circos-0.55.tgz 10163948 RMD160 8f37d699d96cc4bb3cb86a994bf3d7af44aaf261 SHA1 e4938135662dd842406d0decebd8194b260560eb SHA256 3c9f3302b7becb8300d31153d9f8db5552491cb21f5b4cb2f3dc4ca9fd2a362d
 EBUILD circos-0.52.ebuild 813 RMD160 88b8679e01da8a205675adf5b6b3b9c9a5824cc6 SHA1 24dd38709474c2aaafe0ba5cd539d20eafd2397e SHA256 e085009942fb339bb42d186c699bd8d41f252f323f1ae103a01c795f20843d07
-MISC ChangeLog 374 RMD160 3206b5ee701ae7248d21213869bf00fd0040c22e SHA1 d280b3d898d4427b1c5b19f84c787fa8a7d2749f SHA256 3b812ad3fb37806c161d45797d2e93ec29ef5c849d43293bcdaef879a78402c4
+EBUILD circos-0.55.ebuild 974 RMD160 46d1e9d957d88f8f87afbfa5fcdbe33329c0d8a4 SHA1 3e1a3ad483972990921e420095cf4ad93c42a5a7 SHA256 acb019b43f6d956ec8f8caaa73f47da0881e4435dfb031e205b52f9de221b27a
+MISC ChangeLog 489 RMD160 d118a22ebe8af1311abd8a70f926e74ba5fa4399 SHA1 ab8779d94adcb691e03de1b3975949443b10b09a SHA256 024389af08c12577cafba0f3990365e2ef8d0b06ffec94c68f681ad27462c2b8
 MISC metadata.xml 270 RMD160 a62625aa75c71de4ae8aae732ac0e15b337bb9ca SHA1 8366515aaf32f2a515fd71b2870ddd9a61c9ec4c SHA256 c3c737cb492d2d9d0ee5521179beb9497915b35071241b01c04e2f2165d6bd35
+-----BEGIN PGP SIGNATURE-----
+Version: GnuPG v1.4.11 (GNU/Linux)
+
+iEYEARECAAYFAk42zQMACgkQ8xSwyhbn2OavjgCeOU3R6bDnPT+dbHgqS4bpAcTZ
+HWkAnj0FUYtuciKikiiL2Tl//6AuPL7s
+=aJby
+-----END PGP SIGNATURE-----
diff --git a/sci-visualization/circos/circos-0.55.ebuild b/sci-visualization/circos/circos-0.55.ebuild
new file mode 100644
index 000000000000..74b585ecfcf8
--- /dev/null
+++ b/sci-visualization/circos/circos-0.55.ebuild
@@ -0,0 +1,36 @@
+# Copyright 1999-2011 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/sci-visualization/circos/circos-0.55.ebuild,v 1.1 2011/08/01 15:57:50 weaver Exp $
+
+EAPI=4
+
+DESCRIPTION="Circular layout visualization of genomic and other data"
+HOMEPAGE="http://mkweb.bcgsc.ca/circos/"
+SRC_URI="http://mkweb.bcgsc.ca/circos/distribution/${P}.tgz"
+
+LICENSE="GPL-2"
+SLOT="0"
+IUSE=""
+KEYWORDS="~amd64 ~x86"
+
+DEPEND="dev-perl/config-general
+	dev-perl/GD
+	dev-perl/Math-Bezier
+	dev-perl/Math-Round
+	dev-perl/Math-VecStat
+	dev-perl/Params-Validate
+	dev-perl/Readonly
+	dev-perl/regexp-common
+	>=dev-perl/Set-IntSpan-1.11
+	dev-perl/Graphics-ColorObject
+	dev-perl/List-MoreUtils"
+RDEPEND="${DEPEND}"
+
+src_install() {
+	insinto /opt/${PN}
+	find * -maxdepth 0 -type d | xargs doins -r
+	exeinto /opt/${PN}/bin
+	doexe bin/circos bin/gddiag
+	dosym /opt/${PN}/bin/circos /usr/bin/circos
+	find * -maxdepth 0 -type f | xargs dodoc
+}
-- 
2.26.2