From e7c1545e9b1f5377aeb8f6530365ed4570188292 Mon Sep 17 00:00:00 2001 From: Justin Lecher Date: Thu, 5 Mar 2015 11:07:16 +0000 Subject: [PATCH] EAPI Bump Package-Manager: portage-2.2.18/cvs/Linux x86_64 Manifest-Sign-Key: 0xB9D4F231BD1558AB! --- sci-biology/mammoth/ChangeLog | 11 +++++-- sci-biology/mammoth/Manifest | 29 +++++++++++++------ ...mmoth-1.0.ebuild => mammoth-1.0-r1.ebuild} | 16 ++++------ sci-biology/mammoth/metadata.xml | 2 +- 4 files changed, 34 insertions(+), 24 deletions(-) rename sci-biology/mammoth/{mammoth-1.0.ebuild => mammoth-1.0-r1.ebuild} (80%) diff --git a/sci-biology/mammoth/ChangeLog b/sci-biology/mammoth/ChangeLog index 594acc031308..9b62db4a2d37 100644 --- a/sci-biology/mammoth/ChangeLog +++ b/sci-biology/mammoth/ChangeLog @@ -1,6 +1,12 @@ # ChangeLog for sci-biology/mammoth -# Copyright 1999-2012 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/mammoth/ChangeLog,v 1.6 2012/10/19 10:46:56 jlec Exp $ +# Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/mammoth/ChangeLog,v 1.7 2015/03/05 11:07:15 jlec Exp $ + +*mammoth-1.0-r1 (05 Mar 2015) + + 05 Mar 2015; Justin Lecher +mammoth-1.0-r1.ebuild, + -mammoth-1.0.ebuild, metadata.xml: + EAPI Bump 19 Oct 2012; Justin Lecher mammoth-1.0.ebuild, metadata.xml: @@ -26,4 +32,3 @@ +mammoth-1.0.ebuild: Add mammoth, a nice structural alignment program. It contains the MaxSub algorithm, which is used by lots of people. - diff --git a/sci-biology/mammoth/Manifest b/sci-biology/mammoth/Manifest index 74659bb3d883..9228393fa60c 100644 --- a/sci-biology/mammoth/Manifest +++ b/sci-biology/mammoth/Manifest @@ -1,16 +1,27 @@ -----BEGIN PGP SIGNED MESSAGE----- -Hash: SHA256 +Hash: SHA512 AUX 1.0-consistent-system-intrinsic.patch 680 SHA256 34f47d312af131414154a244218bb4e548d51a3d34b9ed4379c2ec90fba094ca SHA512 98fac1ee502ead1109a36b80cce422cf36b0cbbc8971fd345ef1386d050382652211518a2957096d83f36fc44ba8339b9d23f82dcbc04845e5d65a3c6f66cb50 WHIRLPOOL 6512f997e0806eada9a6535c07c9cad1c1d95ed6736436782b0d5ef5346bda8bd596e450cf76baa3a376cbc36cf039d173404ff5f70df5753c29811604c154db DIST mammoth-1.0-src.tgz 319617 SHA256 7a21bc47db4a47cc5ebeeb4c46761a79eece0a802104a3d6189f388a03e59de2 -EBUILD mammoth-1.0.ebuild 1227 SHA256 e178417faff6327efa7b3f2f52355775791efee08d6532c7d2c3f4056acfaed1 SHA512 7faf41153e3486214cedc77235ed9d09d75802d9da0c7abbf1d71f54314e21017aca5a563ab17392ea5c30d0cd106b97ec2d225d1df857d2fa56493520c45e33 WHIRLPOOL 657770c80b7f8f895db6a6e0d25f8d28435b077caed688bb6c6b0b8760ff9f14559a2dd386dba998e16b8b6640eaeb6141a5528ee4ea9bf2f82baa56303b5d31 -MISC ChangeLog 1108 SHA256 d0fa1788a9b9698d1c0fbd4bdfe9364820e578556c781332482821c016d24979 SHA512 0b228af7ec08d1ccc37326da02ed2bf2809ae5b2ec0c1b4a6d87003920316227e2e3406eddb5db7a6d97314c272a6760434dc19e2b364115ea716ffcaa46d66a WHIRLPOOL 4ac4ba7924688422796abe649b6bcc4611274b7c9ad75e3cac144032dcc3eba01c0411db729743ffd3427da44eaafc12a711421839e697a9191e7c9ade74003a -MISC metadata.xml 165 SHA256 560c375768c8e164d954d61924f110da785b4771012cb830963eaa267a319132 SHA512 f197731b98b313b41180dc4b553dab070b28f1badcb259973d528640166feaf8b6c48f56158431d1a4daac9b2873da05c2bd4e4ec269db310581d398a494d166 WHIRLPOOL 83774f905f256ee3dc965af16b472d0ac546314f46d02414b1da590eae1059f8076e63d67f763f9a3afb60a12072fd18c49937b039acbc8ac599ae45c0a04139 +EBUILD mammoth-1.0-r1.ebuild 1106 SHA256 ba0576493165d5cdb39a24070596f3d0adede4f3cb187c220b6fe06f74f5d936 SHA512 1efa95d4de678deed7fa994455cc98b7efc16c32dd522564bb24ce3ba7e3405bd6c8e87177e86e000c0fb3ffb935a59e1071c8675cb4d28c3c912764e0b10279 WHIRLPOOL 7559215e31095a5eb0ff2a738ff195c2e8fa26888492e91cb25040f26385c69eac22a8ceef01ab83af67866341ce4be327eaf4df3cdb1aac3a7bc554b3c81e84 +MISC ChangeLog 1259 SHA256 ec0b6f065a448fdd6a2b31b73b2e07b79fe1d6eed897f03181afeba7767b7e03 SHA512 fd95f36c075c7ae80bac82dd1a340f839887c321e35fe840b9e29e47a0d88808cb97bce7c37c66bd4e608ea3d1368bbbc0df7a60c3f7fd51278fea3ad5a07b39 WHIRLPOOL 8256a6bf294f34e4bd44737afd9c72a042f366b9087e00b0b129ef34d039de4693afe23c2ffa70c93dbeae9ab2b75373dd88a455ebb377f1d42a2f960e486419 +MISC metadata.xml 166 SHA256 29b228f683c71345323d841414e410c929a320f34536eb30910498728260c8ac SHA512 51c5345bb1c4466b73e2feac8895c64fc119365e7f2c156702f4c93664d3aba028b3da9daaabf24f61a88220345fca7806771a252e8ae906cac5dec97862c7e0 WHIRLPOOL 211bf955d94fc1d93b12388a2c597a8d440fb5d78f84d59b2549569537098c3525b1fbab707441d62fabe20edcac2fd9ebe09c5d9870f1c9558d7ee90d5db5b3 -----BEGIN PGP SIGNATURE----- -Version: GnuPG v2.0.19 (GNU/Linux) -Comment: GPGTools - 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unpack ${A} - cd "${S}" - +src_prepare() { # Broken with gfortran without this patch epatch "${FILESDIR}"/${PV}-consistent-system-intrinsic.patch @@ -42,8 +41,3 @@ src_unpack() { # Let's do the standard stuff instead. eautoreconf } - -src_install() { - emake DESTDIR="${D}" install || die "emake install failed" - dodoc README AUTHORS || die -} diff --git a/sci-biology/mammoth/metadata.xml b/sci-biology/mammoth/metadata.xml index d4648212cbad..f17a827e3101 100644 --- a/sci-biology/mammoth/metadata.xml +++ b/sci-biology/mammoth/metadata.xml @@ -1,5 +1,5 @@ - sci-biology + sci-biology -- 2.26.2