From: Andrey Kislyuk <weaver@gentoo.org>
Date: Sun, 25 Sep 2011 00:33:39 +0000 (+0000)
Subject: Version bump
X-Git-Url: http://git.tremily.us/gitweb.cgi?a=commitdiff_plain;h=f853ca3908c307d5477bde37c57e36a31ff7b9ce;p=gentoo.git

Version bump

Package-Manager: portage-2.2.0_alpha45/cvs/Linux x86_64
---

diff --git a/sci-biology/allpathslg/ChangeLog b/sci-biology/allpathslg/ChangeLog
index 0c707e1f8ea4..35bdb3c2fe96 100644
--- a/sci-biology/allpathslg/ChangeLog
+++ b/sci-biology/allpathslg/ChangeLog
@@ -1,6 +1,11 @@
 # ChangeLog for sci-biology/allpathslg
 # Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/allpathslg/ChangeLog,v 1.3 2011/06/20 05:34:50 weaver Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/allpathslg/ChangeLog,v 1.4 2011/09/25 00:33:39 weaver Exp $
+
+*allpathslg-38573 (25 Sep 2011)
+
+  25 Sep 2011; Andrey Kislyuk <weaver@gentoo.org> +allpathslg-38573.ebuild:
+  Version bump
 
 *allpathslg-37578 (20 Jun 2011)
 
diff --git a/sci-biology/allpathslg/Manifest b/sci-biology/allpathslg/Manifest
index e81f90817af0..f4c07f7126a8 100644
--- a/sci-biology/allpathslg/Manifest
+++ b/sci-biology/allpathslg/Manifest
@@ -3,14 +3,16 @@ Hash: SHA1
 
 DIST allpathslg-35725.tar.gz 2375961 RMD160 b65870041b6b96b81194cf1b9f820c523be29121 SHA1 2a10c88dc2c313a7307a584495195c40640989f8 SHA256 992089f300ea6ae298036f0636a21e4475ac8961927f59c4b78bb2efc2c068ac
 DIST allpathslg-37578.tar.gz 2511464 RMD160 462febe6efc690d53feaaff9ffb118a0c7e6a134 SHA1 45ca0d5cee312ff77f2c425b6b615dbec0f4726c SHA256 b4fdb6e7cc523cdb2831562bfabdf640dc2eb89f09d626ffeb4d1de358f46056
+DIST allpathslg-38573.tar.gz 2638531 RMD160 bcb7d5d0f1fb37d9418beb6a347f1a68d198bd84 SHA1 aa5240ab4a5159d4e47aebc1cb7f3d7e374c9758 SHA256 8f8a9d18371ea0e8c8927e8ca5ce7a78bd6ad667ce06a0b86e8b444e79ba7c05
 EBUILD allpathslg-35725-r1.ebuild 854 RMD160 d654f8c5d2df58883552dae42c16b97f7a056a29 SHA1 1d3f4abaf5bff7afe90d8055b6a27f5e5bf58a3d SHA256 02a9ff15e8357640d58cb1c784ede41a710f67393bae4a5beba02720fdd5ea28
 EBUILD allpathslg-37578.ebuild 896 RMD160 c4c65be1dd467f64d45b9f1f840857cebef3f1c7 SHA1 6d3d86741c87422533ca0e6ebd7fdc0872d3ba97 SHA256 7f581dce54868335327d5a2585c3d5a633c26301f650944099757206d8390dbc
-MISC ChangeLog 722 RMD160 e4b8840bc4a7e9cf9416bd7e6e58aa5db269b414 SHA1 80aff7b63e62db4bc5b044996916f21441b55f8e SHA256 f5ab652cc338b66f6a0ba57f24324349d031abad970ad13cfc33e4171f27422d
+EBUILD allpathslg-38573.ebuild 800 RMD160 7aeb63047516ebe16e2b17ad790ae5a2cc1582fe SHA1 389c8d3c0dc2a750d390708aa579e606a26fee1b SHA256 6c41d6b16d5301f5309b11ac2c224604e9f0c326e5b1b21b876be7db8e019daa
+MISC ChangeLog 847 RMD160 1e6a4e40caf7f05c29e73d9d48fff73180fcd1b0 SHA1 e97e5d8e4dc75a6ba19f4f36eb88ee7555a13c14 SHA256 9ac3f877d36978e7b7690803bf423b4df349c732ef497a1b19b7f5ac0864174a
 MISC metadata.xml 259 RMD160 d9d81b67d635fabd81aef8ae0edf971211ae9072 SHA1 8e32f751c67ff891fa35405a2cf6fb33752d6eb1 SHA256 541c3fbcf299d9a8ccf4132ee61f9e53a5d737cefdaa6fdc77764d8d4c7f3110
 -----BEGIN PGP SIGNATURE-----
 Version: GnuPG v1.4.11 (GNU/Linux)
 
-iEYEARECAAYFAk3/aCIACgkQ8xSwyhbn2OYAngCdEk+unqq/C1+ziFtayPHQTGXk
-BiMAn2jkuJOcmcOuZGUfSu/aPIZeW9mc
-=gS15
+iEYEARECAAYFAk5+dugACgkQ8xSwyhbn2OYwJwCgnfWCk1oFSsP3/wXd9G3qifCu
+FmIAn2pPD9H/wE4xYbitIAFuCv674BNI
+=Kq6I
 -----END PGP SIGNATURE-----
diff --git a/sci-biology/allpathslg/allpathslg-38573.ebuild b/sci-biology/allpathslg/allpathslg-38573.ebuild
new file mode 100644
index 000000000000..71b8eb21adbc
--- /dev/null
+++ b/sci-biology/allpathslg/allpathslg-38573.ebuild
@@ -0,0 +1,27 @@
+# Copyright 1999-2011 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/allpathslg/allpathslg-38573.ebuild,v 1.1 2011/09/25 00:33:39 weaver Exp $
+
+EAPI="2"
+
+DESCRIPTION="De novo assembly of whole-genome shotgun microreads"
+HOMEPAGE="http://www.broadinstitute.org/science/programs/genome-biology/crd"
+SRC_URI="ftp://ftp.broadinstitute.org/pub/crd/ALLPATHS/Release-LG/latest_source_code/${P}.tar.gz"
+
+LICENSE="as-is"
+SLOT="0"
+IUSE=""
+KEYWORDS="~amd64"
+
+DEPEND="dev-libs/boost
+	>=sys-devel/gcc-4.3.3
+	sci-biology/vaal"
+RDEPEND=""
+
+src_install() {
+	einstall || die
+	# Provided by sci-biology/vaal
+	for i in QueryLookupTable ScaffoldAccuracy MakeLookupTable Fastb ShortQueryLookup; do
+		rm "${D}/usr/bin/$i" || die
+	done
+}