sci-biology/hmmer: Cleanup broken versions re bug #421799
authorKent Fredric <kentnl@gentoo.org>
Mon, 25 Sep 2017 13:24:20 +0000 (02:24 +1300)
committerKent Fredric <kentnl@gentoo.org>
Tue, 26 Sep 2017 05:07:24 +0000 (18:07 +1300)
Closes: https://bugs.gentoo.org/421799
Package-Manager: Portage-2.3.8, Repoman-2.3.3

sci-biology/hmmer/hmmer-2.3.2-r3.ebuild [deleted file]

diff --git a/sci-biology/hmmer/hmmer-2.3.2-r3.ebuild b/sci-biology/hmmer/hmmer-2.3.2-r3.ebuild
deleted file mode 100644 (file)
index 0d1a357..0000000
+++ /dev/null
@@ -1,52 +0,0 @@
-# Copyright 1999-2017 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=6
-
-DESCRIPTION="Sequence analysis using profile hidden Markov models"
-LICENSE="GPL-2"
-HOMEPAGE="http://hmmer.janelia.org/"
-SRC_URI="ftp://ftp.genetics.wustl.edu/pub/eddy/${PN}/${PV}/${P}.tar.gz"
-
-SLOT="0"
-IUSE="threads test"
-KEYWORDS="~amd64 ~x86"
-
-DEPEND=""
-RDEPEND=""
-
-src_configure() {
-       econf \
-               --host=${CHOST} \
-               --prefix="${D}"/usr \
-               --exec_prefix="${D}"/usr \
-               --mandir="${D}"/usr/share/man \
-               --enable-lfs \
-               $(use_enable threads)
-}
-
-src_install() {
-       emake DESTDIR="${D}" install
-
-       pushd src >/dev/null || die
-       dolib libhmmer.a
-       insinto /usr/include/hmmer
-       doins *.h
-       popd >/dev/null || die
-
-       pushd squid >/dev/null || die
-       dobin afetch alistat compalign compstruct revcomp seqstat seqsplit sfetch shuffle sreformat sindex weight translate
-       dolib libsquid.a
-       insinto /usr/include/hmmer
-       doins *.h
-       popd >/dev/null || die
-
-       dodoc NOTES
-       newdoc 00README README
-       insinto /usr/share/doc/${PF}
-       doins Userguide.pdf
-}
-
-src_test() {
-       emake check
-}