+++ /dev/null
-# Copyright 1999-2018 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=6
-
-PYTHON_COMPAT=( python2_7 )
-
-inherit autotools flag-o-matic python-single-r1 qmake-utils
-
-DESCRIPTION="A Modular, Open-Source whole genome assembler"
-HOMEPAGE="http://amos.sourceforge.net/"
-SRC_URI="mirror://sourceforge/${PN}/${P}.tar.gz
- https://dev.gentoo.org/~soap/distfiles/${PN}-3.1.0-fix-c++14.patch.bz2"
-
-LICENSE="Artistic"
-SLOT="0"
-KEYWORDS="~amd64 ~x86"
-IUSE="qt4"
-REQUIRED_USE="${PYTHON_REQUIRED_USE}"
-
-DEPEND="qt4? ( dev-qt/qtcore:4 )"
-RDEPEND="${DEPEND}
- ${PYTHON_DEPS}
- dev-perl/DBI
- dev-perl/Statistics-Descriptive
- sci-biology/mummer"
-
-PATCHES=(
- "${FILESDIR}"/${P}-gcc-4.7.patch
- "${FILESDIR}"/${P}-goBambus2.py-indent-and-cleanup.patch
- "${WORKDIR}"/${P}-fix-c++14.patch
- "${FILESDIR}"/${P}-qa-Wformat.patch
- "${FILESDIR}"/${P}-fix-build-system.patch
-)
-
-src_prepare() {
- default
- eautoreconf
-
- # prevent GCC 6 log pollution due
- # to hash_map deprecation in C++11
- append-cxxflags -Wno-cpp
-}
-
-src_configure() {
- econf \
- --with-qmake-qt4=$(usex qt4 $(qt4_get_bindir)/qmake no)
-}
-
-src_install() {
- default
- python_fix_shebang "${ED%/}"/usr/bin/goBambus2
-}