# Copyright 1999-2017 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
-EAPI=5
+EAPI=6
PYTHON_COMPAT=( python2_7 python3_{4,5,6} )
PYTHON_REQ_USE="threads(+)"
DOC_PV=${PV}
-inherit eutils fortran-2 distutils-r1 flag-o-matic git-r3 multilib multiprocessing toolchain-funcs
+inherit fortran-2 distutils-r1 flag-o-matic git-r3 multiprocessing toolchain-funcs
DESCRIPTION="Scientific algorithms library for Python"
HOMEPAGE="https://www.scipy.org/"
sparse? ( sci-libs/umfpack:0= )"
DEPEND="${CDEPEND}
dev-lang/swig
- >=dev-python/cython-0.22[${PYTHON_USEDEP}]
+ >=dev-python/cython-0.23.4[${PYTHON_USEDEP}]
virtual/pkgconfig
test? ( dev-python/nose[${PYTHON_USEDEP}] )
"
DISTUTILS_IN_SOURCE_BUILD=1
-PATCHES=(
- "${FILESDIR}"/${PN}-0.12.0-blitz.patch
- "${FILESDIR}"/${PN}-0.12.0-restore-sys-argv.patch
-)
-
pc_incdir() {
$(tc-getPKG_CONFIG) --cflags-only-I $@ | \
sed -e 's/^-I//' -e 's/[ ]*-I/:/g' -e 's/[ ]*$//' -e 's|^:||'
append-fflags -fPIC
local libdir="${EPREFIX}"/usr/$(get_libdir)
- cat >> site.cfg <<-EOF
+ cat >> site.cfg <<-EOF || die
[blas]
include_dirs = $(pc_incdir cblas)
library_dirs = $(pc_libdir cblas blas):${libdir}
lapack_libs = $(pc_libs lapack)
EOF
+ # Drop hashes to force rebuild of cython based .c code
+ rm cythonize.dat || die
+
distutils-r1_python_prepare_all
}
python_compile() {
${EPYTHON} tools/cythonize.py || die
- distutils-r1_python_compile -j $(makeopts_jobs) ${SCIPY_FCONFIG}
+ distutils-r1_python_compile \
+ $(usex python_targets_python3_5 "" "-j $(makeopts_jobs)") \
+ ${SCIPY_FCONFIG}
}
python_test() {
# fails with bdist_egg. should it be fixed in distutils-r1 eclass?
distutils_install_for_testing ${SCIPY_FCONFIG}
cd "${TEST_DIR}" || die "no ${TEST_DIR} available"
+ einfo "Run test I"
"${PYTHON}" -c \
'import numpy as np; print("relaxed strides checking:", np.ones((10,1),order="C").flags.f_contiguous)' \
|| die
+ einfo "Run test II"
# https://github.com/scipy/scipy/issues/5426
"${EPYTHON}" -c \
"import scipy, sys; r = scipy.test('fast', verbose=2, raise_warnings='release'); sys.exit(0 if r.wasSuccessful() else 1)" \