sci-biology/maq: Remove old
authorDavid Seifert <soap@gentoo.org>
Mon, 6 Feb 2017 20:48:02 +0000 (21:48 +0100)
committerDavid Seifert <soap@gentoo.org>
Mon, 6 Feb 2017 21:26:41 +0000 (22:26 +0100)
Package-Manager: Portage-2.3.3, Repoman-2.3.1
Closes: https://github.com/gentoo/gentoo/pull/3856

sci-biology/maq/maq-0.7.1-r1.ebuild [deleted file]
sci-biology/maq/maq-0.7.1.ebuild [deleted file]

diff --git a/sci-biology/maq/maq-0.7.1-r1.ebuild b/sci-biology/maq/maq-0.7.1-r1.ebuild
deleted file mode 100644 (file)
index 1fd699b..0000000
+++ /dev/null
@@ -1,40 +0,0 @@
-# Copyright 1999-2017 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Id$
-
-EAPI=4
-
-inherit autotools eutils
-
-DESCRIPTION="Mapping and Assembly with Qualities, mapping NGS reads to reference genomes"
-HOMEPAGE="http://maq.sourceforge.net/"
-SRC_URI="
-       mirror://sourceforge/${PN}/${P}.tar.bz2
-       mirror://sourceforge/${PN}/calib-36.dat.gz"
-
-LICENSE="GPL-3"
-SLOT="0"
-IUSE=""
-KEYWORDS="amd64 x86 ~amd64-linux ~x86-linux"
-
-RDEPEND="sys-libs/zlib"
-DEPEND="${RDEPEND}"
-
-src_prepare() {
-       epatch \
-               "${FILESDIR}"/${P}-flags.patch \
-               "${FILESDIR}"/${P}-bfr-overfl.patch \
-               "${FILESDIR}"/${P}-gcc-4.7.patch
-       sed \
-               -e '/ext_CFLAGS/s:-m64::g' \
-               -i configure* || die
-       eautoreconf
-}
-
-src_install() {
-       default
-       insinto /usr/share/maq
-       doins "${WORKDIR}"/*.dat
-       doman maq.1
-       dodoc ${PN}.pdf
-}
diff --git a/sci-biology/maq/maq-0.7.1.ebuild b/sci-biology/maq/maq-0.7.1.ebuild
deleted file mode 100644 (file)
index 1f8df1f..0000000
+++ /dev/null
@@ -1,24 +0,0 @@
-# Copyright 1999-2017 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Id$
-
-DESCRIPTION="Mapping and Assembly with Qualities, mapping NGS reads to reference genomes"
-HOMEPAGE="http://maq.sourceforge.net/"
-SRC_URI="mirror://sourceforge/${PN}/${P}.tar.bz2
-       mirror://sourceforge/${PN}/calib-36.dat.gz"
-
-LICENSE="GPL-3"
-SLOT="0"
-IUSE=""
-KEYWORDS="amd64 x86"
-
-DEPEND=""
-RDEPEND=""
-
-src_install() {
-       emake DESTDIR="${D}" install || die
-       insinto /usr/share/maq
-       doins "${WORKDIR}"/*.dat || die
-       doman maq.1
-       dodoc AUTHORS ChangeLog NEWS maq.pdf
-}