Respect CFLAGS and CC, #394545

Package-Manager: portage-2.2.0_alpha80/cvs/Linux x86_64

diff --git a/sci-biology/exonerate/ChangeLog b/sci-biology/exonerate/ChangeLog
index 567780102b96d6b050d7db10cad433e15f66fa44..fd8e112282a1e2fe07d85600f9c3c40f292b24fd 100644 (file)
--- a/sci-biology/exonerate/ChangeLog
+++ b/sci-biology/exonerate/ChangeLog
@@ -1,6 +1,9 @@
 # ChangeLog for sci-biology/exonerate
 # Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/exonerate/ChangeLog,v 1.4 2011/06/22 18:00:15 grobian Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/exonerate/ChangeLog,v 1.5 2011/12/13 14:56:55 jlec Exp $
+
+  13 Dec 2011; Justin Lecher <jlec@gentoo.org> exonerate-2.2.0-r1.ebuild:
+  Respect CFLAGS and CC, #394545
 
   22 Jun 2011; Fabian Groffen <grobian@gentoo.org> exonerate-2.2.0-r1.ebuild:
   Marked ~ppc-macos and ~x64-macos for bug #372327

diff --git a/sci-biology/exonerate/Manifest b/sci-biology/exonerate/Manifest
index c8b50119627ffbf06ce8f63610f9f5fe0308d4b8..d401cf20a017b2361ca7b83eb060caba27f175d9 100644 (file)
--- a/sci-biology/exonerate/Manifest
+++ b/sci-biology/exonerate/Manifest
@@ -1,16 +1,16 @@
 -----BEGIN PGP SIGNED MESSAGE-----
-Hash: SHA1
+Hash: SHA512
 
 AUX exonerate-2.2.0-asneeded.patch 358 RMD160 a0eefe021fc96000bf525139776da63396b9b0ff SHA1 e05ed5649b17cbdd5ccf1f69d6d84364e7a9e1de SHA256 0f22b06cf915449bd84afb20100d2014c126fc62efb46f7a1a58cf907b69feec
 DIST exonerate-2.2.0.tar.gz 509870 RMD160 3441a642c75af8b5676253b020f47650360ba320 SHA1 ad4de207511e4d421e5cc28dda2261421c515bf0 SHA256 0ea2720b1388fa329f889522f43029b416ae311f57b229129a65e779616fe5ff
-EBUILD exonerate-2.2.0-r1.ebuild 930 RMD160 0dd2e60d0a31dc808de9b73c13a15b4dfe7a6ad0 SHA1 a7c4f16eb22e89e9aac9774cc756f682d4ef7b5c SHA256 49393be5c5d1d9b1292b3d583ba425c0f0e25acf381e2bd430a6516da2dc54e6
+EBUILD exonerate-2.2.0-r1.ebuild 1025 RMD160 ecca1020ab88834f50d068a4280fa4d1ece1abd2 SHA1 4331b12586c8f87bfa93edf545e10de2beb78bc9 SHA256 2db6427282d610f5011dd528d2a37b56e2aaed2d3f89dde441154e0bf113309c
 EBUILD exonerate-2.2.0.ebuild 793 RMD160 3ca5f6eeace24df6b5eef87c2e8cf352e4bd25a5 SHA1 4ff705c49d30511adc2731732f882ab0eedfc6f7 SHA256 97757b879c2e0fec7fcbfac0e4bcd604c27aa504fa06127ad30873a203eb6fed
-MISC ChangeLog 1025 RMD160 196ab3202ea30800823f231c5e84737e09fdbf51 SHA1 a2fb9a9b7a12098095b4b12e8163d53a65a0771f SHA256 bbabedde58425c4235d7dd146b6420d0ed781d593cc520c4041a69888487429d
+MISC ChangeLog 1130 RMD160 ab0768d9927375d4daac1f9f033a95772aec8132 SHA1 23766d54997ecb2c4b1e495394325c808921e890 SHA256 8b164e3abde3998a2c7ec43d0e96b8f5d389f8d5f2cf91ab274e4420f2c40759
 MISC metadata.xml 435 RMD160 f91fd7aee2f7691606000ff4655467123eba3f2f SHA1 0ee673e7f77aacb6e3205e99b2be521ca0e23ea8 SHA256 65a421b9a3e74373af88227e95688ee42389a74afb395098a1ff901df83494a7
 -----BEGIN PGP SIGNATURE-----
-Version: GnuPG v2.0.17 (Darwin)
+Version: GnuPG v2.0.18 (GNU/Linux)
 
-iEYEARECAAYFAk4CLYkACgkQX3X2B8XHTonLRQCggQtKk3k5GZJEczC1ZyFWEcDq
-fjUAn0u24umJPjxkXDJAKAuzoDFtZPTx
-=d0G8
+iEYEAREKAAYFAk7nZ70ACgkQgAnW8HDreRZHZwCgvxZ2exP8GTIfgIcJ6/CxNgpJ
++PEAoK0GyUd7Waa34OTS9/QXhIV8el68
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diff --git a/sci-biology/exonerate/exonerate-2.2.0-r1.ebuild b/sci-biology/exonerate/exonerate-2.2.0-r1.ebuild
index 38e8156d77eb3550db90afc45d1aee2c4f25c466..3262b1dc3ea13003d0723545e8bdb6075ee1020a 100644 (file)
--- a/sci-biology/exonerate/exonerate-2.2.0-r1.ebuild
+++ b/sci-biology/exonerate/exonerate-2.2.0-r1.ebuild
@@ -1,10 +1,10 @@
 # Copyright 1999-2011 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/exonerate/exonerate-2.2.0-r1.ebuild,v 1.3 2011/06/22 18:00:15 grobian Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/exonerate/exonerate-2.2.0-r1.ebuild,v 1.4 2011/12/13 14:56:55 jlec Exp $
 
-EAPI="2"
+EAPI=4
 
-inherit autotools eutils
+inherit autotools eutils toolchain-funcs
 
 DESCRIPTION="Generic tool for pairwise sequence comparison"
 HOMEPAGE="http://www.ebi.ac.uk/~guy/exonerate/"
@@ -19,6 +19,10 @@ DEPEND="dev-libs/glib:2"
 RDEPEND="${DEPEND}"
 
 src_prepare() {
+       tc-export CC
+       sed \
+               -e 's: -O3 -finline-functions::g' \
+               -i configure.in || die
        epatch "${FILESDIR}"/${P}-asneeded.patch
        eautoreconf
 }