Version Bump

Package-Manager: portage-2.2_rc67/cvs/Linux x86_64

diff --git a/sci-chemistry/mustang/ChangeLog b/sci-chemistry/mustang/ChangeLog
index befb97d8315e305932b9b1b6ebb68c94ecd2e193..761ecc12aa118c20536f3693c2f865109b13bfd0 100644 (file)
--- a/sci-chemistry/mustang/ChangeLog
+++ b/sci-chemistry/mustang/ChangeLog
@@ -1,6 +1,11 @@
 # ChangeLog for sci-chemistry/mustang
-# Copyright 1999-2008 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/mustang/ChangeLog,v 1.5 2008/12/19 20:22:42 loki_val Exp $
+# Copyright 1999-2010 Gentoo Foundation; Distributed under the GPL v2
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/mustang/ChangeLog,v 1.6 2010/07/06 12:07:57 jlec Exp $
+
+*mustang-3.2.1 (06 Jul 2010)
+
+  06 Jul 2010; Justin Lecher <jlec@gentoo.org> +mustang-3.2.1.ebuild:
+  Version Bump
 
   19 Dec 2008; Peter Alfredsen <loki_val@gentoo.org>
   +files/mustang-3-gcc43.patch, mustang-3.ebuild:

diff --git a/sci-chemistry/mustang/Manifest b/sci-chemistry/mustang/Manifest
index 47ceffa2d591615832c3a29de5bbb3c76ba00e48..2eb36519bbdc82f884666a865632962650e8414f 100644 (file)
--- a/sci-chemistry/mustang/Manifest
+++ b/sci-chemistry/mustang/Manifest
@@ -1,5 +1,17 @@
+-----BEGIN PGP SIGNED MESSAGE-----
+Hash: SHA1
+
 AUX mustang-3-gcc43.patch 2262 RMD160 d2f9d6de98f679af3b15507b42a410f1e0ba7e08 SHA1 532517644ceaaa0e4263cb04e78f3f47df450592 SHA256 2d9ec5f36d069e51909d56a58003c51bcd409c78946712753d313192c48558b2
+DIST mustang-3.2.1.tar 788480 RMD160 15de074d928aa09dda1543778f33b4b82dcc4c28 SHA1 11e47f853374d9ebd6c3a8187cb01f8e9f401bfe SHA256 29987d88eacc29e772ebf3d41eeac8b2d160e715f35b1a1a0eff462ea462042d
 DIST mustang_v.3.tgz 164752 RMD160 e90e55a0cf31955277a68e51f91bc1e00417dacb SHA1 d6e34ecc3094ec1f2c1dbce703a572bf75f406dc SHA256 6d35597930c456d03bb05d644408fd00b1e060d9c8f83353f33b06a42654f552
+EBUILD mustang-3.2.1.ebuild 1081 RMD160 7d7688473e00a0222002a513d9fc7d29555580f3 SHA1 3348ac0cfeaa795dcf294fe954f2cff6738bc0d7 SHA256 fde8b498c991e6eaf77486eebdc265eaf46d1caac3affc43b825eff3110195db
 EBUILD mustang-3.ebuild 1126 RMD160 e7346977f2dd6b295021c7508b9572cb4438ccea SHA1 b1b0f9443f4d61a3fcb0b2a264769fcf73881421 SHA256 7153751c03d8d4506c37424de8d09c27e36d9a9c1320f44e1531c2244df5a178
-MISC ChangeLog 1011 RMD160 58e24b4585bf7bfabee3572aae147f1ae9112b7f SHA1 77d8d59f960271506afcbb3e673b6270062de0fd SHA256 c4ff86829ae8bf7bcc93118e7f5f9ab01bb48ed8f1d7614218d1f0a132c6deea
+MISC ChangeLog 1123 RMD160 0f6c77509794497ac5e383e289800c1a2dde51aa SHA1 ad7aacb695ab4f471e61f21d7a659bf85f2007da SHA256 54bf7f8da60265f16242902d65a5067a0d765c2e9ab52ddc356bf243631a21a5
 MISC metadata.xml 166 RMD160 4452298fd03e7c9395d1182bfe69d60a14144af6 SHA1 cb0b513473c0348f4f6f6cd9a132e4884155fddb SHA256 84c92b49702daf95eace8d2765215cbd8650da4ef776f9f700b5ce3785dec852
+-----BEGIN PGP SIGNATURE-----
+Version: GnuPG v2.0.15 (GNU/Linux)
+
+iEYEARECAAYFAkwzHKMACgkQgAnW8HDreRYz/gCggD9RQS0sZ8yJOxJiUsGHJ7yG
+5ccAoM8T9KE3NopAwN8c1XH9QylDlRUk
+=BluN
+-----END PGP SIGNATURE-----

diff --git a/sci-chemistry/mustang/mustang-3.2.1.ebuild b/sci-chemistry/mustang/mustang-3.2.1.ebuild
new file mode 100644 (file)
index 0000000..b0dc9ec
--- /dev/null
+++ b/sci-chemistry/mustang/mustang-3.2.1.ebuild
@@ -0,0 +1,44 @@
+# Copyright 1999-2010 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/mustang/mustang-3.2.1.ebuild,v 1.1 2010/07/06 12:07:57 jlec Exp $
+
+EAPI="3"
+
+inherit base toolchain-funcs
+
+MY_PN="MUSTANG"
+SRC_P="${PN}_v${PV}"
+MY_P="${MY_PN}_v${PV}"
+
+DESCRIPTION="MUltiple STructural AligNment AlGorithm."
+HOMEPAGE="http://www.cs.mu.oz.au/~arun/mustang/"
+SRC_URI="http://www.csse.unimelb.edu.au/~arun/${PN}/${SRC_P}.tgz -> ${P}.tar"
+
+LICENSE="BSD"
+SLOT="0"
+KEYWORDS="~amd64 ~x86"
+IUSE=""
+
+S="${WORKDIR}/${MY_P}"
+
+src_compile() {
+       emake \
+               CPP=$(tc-getCXX) \
+               CPPFLAGS="${CXXFLAGS}" \
+               LDFLAGS="${LDFLAGS}" \
+               || die "emake failed"
+}
+
+src_test() {
+       ./bin/${P} -f ./data/test/test_zf-CCHH || die
+}
+
+src_install() {
+       newbin bin/${P} mustang || die
+}
+
+pkg_postinst() {
+       elog "If you use this program for an academic paper, please cite:"
+       elog "Arun S. Konagurthu, James C. Whisstock, Peter J. Stuckey, and Arthur M. Lesk"
+       elog "Proteins: Structure, Function, and Bioinformatics. 64(3):559-574, Aug. 2006"
+}