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Drop old
authorJustin Lecher <jlec@gentoo.org>
Mon, 9 Mar 2015 13:33:03 +0000 (13:33 +0000)
committerJustin Lecher <jlec@gentoo.org>
Mon, 9 Mar 2015 13:33:03 +0000 (13:33 +0000)
Package-Manager: portage-2.2.18/cvs/Linux x86_64
Manifest-Sign-Key: 0xB9D4F231BD1558AB!

sci-chemistry/oasis/ChangeLog patch | blob | history
sci-chemistry/oasis/Manifest patch | blob | history
sci-chemistry/oasis/oasis-4.0-r2.ebuild [deleted file] patch | blob | history
sci-chemistry/oasis/oasis-4.0-r3.ebuild patch | blob | history

diff --git a/sci-chemistry/oasis/ChangeLog b/sci-chemistry/oasis/ChangeLog
index c158f95c7f497193c097b43fe07c320ee9f41376..e4d581c3f050ac0ce5b22efcab00455a99d319d9 100644 (file)
--- a/sci-chemistry/oasis/ChangeLog
+++ b/sci-chemistry/oasis/ChangeLog
@@ -1,6 +1,10 @@
 # ChangeLog for sci-chemistry/oasis
-# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/oasis/ChangeLog,v 1.25 2013/12/24 12:43:46 ago Exp $
+# Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/oasis/ChangeLog,v 1.26 2015/03/09 13:33:02 jlec Exp $
+
+  09 Mar 2015; Justin Lecher <jlec@gentoo.org> -oasis-4.0-r2.ebuild,
+  oasis-4.0-r3.ebuild:
+  Drop old
 
   24 Dec 2013; Agostino Sarubbo <ago@gentoo.org> oasis-4.0-r3.ebuild:
   Stable for x86, wrt bug #485944
diff --git a/sci-chemistry/oasis/Manifest b/sci-chemistry/oasis/Manifest
index 0c860791843c233cd552a597d3e68b5bc68672de..5cdea7d8314e1d2617b3685a720e16195040b516 100644 (file)
--- a/sci-chemistry/oasis/Manifest
+++ b/sci-chemistry/oasis/Manifest
@@ -1,26 +1,27 @@
 -----BEGIN PGP SIGNED MESSAGE-----
-Hash: SHA256
+Hash: SHA512
 
 AUX 4.0-makefile.patch 1277 SHA256 4bafff2ae7e58a908d7203e56643122f56c0cc0ebca8a103f2ca73fefa5986ce SHA512 9fa284c966500ec8a180f422b234ee6742b2ee00d89eee45e782516194a2533f2075063612e809ba232fd05bf8565f7e1467c90915365ffe6f3d44b8e3d53aa9 WHIRLPOOL 44e9a279b65bb7548abfd96928f8f59c240e53b738ac920578b15c07de54b37eacafa3cc66cd71e7bdd08128d402c59e8b26ca2285be6ea562255246f9cbf5a5
 DIST oasis4.0_Linux.zip 6714528 SHA256 56da70ce0c2750aaddf64ad2cd7852fc341d2022209484beb356b4e73dec61ba SHA512 b43b8315e8e3bc8531e11021605100f231635e2363256a19ed0f51015913221eb9e37b3891b9b1239bf83c9ada8f65a1bdc79ec5745201436f8c3b5019bd4bf7 WHIRLPOOL 24d337391997d036bd657ab22aecc77d36f7fa0af573d17433869a29640a8a10368c75ebee114071c577cc0cce34d838271147599d99e2c389088b8c6185f41b
-EBUILD oasis-4.0-r2.ebuild 1734 SHA256 63cbf2a9da650e6c056473d94327aa58185f8041057f4aa13cc491d0444e8a1b SHA512 abd2cb4bff92b0c8974c0063932cdc66723d4980ddf9c9577624613ec0c475711a2146fd18cdf9ac78e37a31ad114b4db6765e3971dd6acbbd80bf19983e1796 WHIRLPOOL f9824dd1c8b9cf6881014137d9ddaae9c492fd721d2c9884c004b368f397008bec9296e193875e78d09b176a3dd033d0169b95bee99dec5a6780e38abff56df4
-EBUILD oasis-4.0-r3.ebuild 1584 SHA256 fa3c15cd26e4fa24df8471485e6c9561840cd569219cc80500e12f660ac2f6b4 SHA512 ace4b22a1124f05c045247aa1533dc860bb1a70b0e3d1e30169d676523dc4f035e91b07d6c3d85d5e36e83fc84e9c049db87fdb82f1a840c27f5013789b6fa90 WHIRLPOOL 711991ce5c000b3fe59b8ef5fcdd44076258201c03507055fabf39fc1879259ac17529f388a46f49e2ef5f553f009c553f4c291cbbe7b9e90c32afd987c543cd
-MISC ChangeLog 3156 SHA256 370d031155058d6fdfb1897119ce8c787e2e3aacc14171c8b6f702afc97f680f SHA512 c33bc9064334d282c1349a80764f39d349325330651a46ed73143e427030d95bbcc739f03a24aabbd01b453f3fc11e05f6f925f6ebaec293b27b83297a44b1b4 WHIRLPOOL 780ed5bc405674cd0ed11b84d96100ffbbdb0fbc5832f219479f1b867b1793b4af511dc8a940c99d5d785299435b00c696e6979f307fd7452cece092f323eda3
+EBUILD oasis-4.0-r3.ebuild 1575 SHA256 87d68b7a6cb665a02ca43902dd9f41bba3ee643efaac428309bfdbde5db4d001 SHA512 ad9ceaf1c301a64cda56f6a970928cc0f5a91e3d6ba1ec0ed749cd05a428f93186f59334142da00412dd32ed471c8551f5bcf588086f37cf1c0b63b7dd318ff6 WHIRLPOOL 0c168aa06894fca658650b21a75ebd735e34bf4661a5baaef112a2dcbd6cac4235ae0c1ce1da8de00104980d195137cd6a18ef98ee621a0906d68708626bab27
+MISC ChangeLog 3261 SHA256 26beeac2ffb6a1368e6f5b876f337406bfb74941de3fc6dfdd5193d2a7e992de SHA512 1eacf379e2f6cfc064067a981b6986bfe973016f68c07c7c3d750531f85c5556d779ae5f57d52e363a14d5310083af7c9ffb6e7e99aaac1d9995183c503f29a9 WHIRLPOOL c082e85eebe3e545df887f8407825dd26a6f225e47b88365710eda64d5cd494d45e9f177784ecb1261f748d477e6fa9626e94416579b13a5e5a67671c2cecece
 MISC metadata.xml 258 SHA256 709c4392c2b78f506807b607cb1eceedfc987de12591f0d3958165238dba5833 SHA512 5de77831f3b78bb5f773e0c354b1223e2ba1ab6e80919b6109f405ecd2499e3ea8afd5e8af1d9fa293aec0f98ab9100a1d1ff72fdb3d092196d99eb5deddbaa5 WHIRLPOOL e796cf92ab83111af35db698dcb6c1b003ec3b3ac03805eae9e6c4dacaac6a027775d0f4b096f2354cf89994c468caeb1653de106b222adcd531ecc5a7b6341f
 -----BEGIN PGP SIGNATURE-----
-Version: GnuPG v2.0.22 (GNU/Linux)
+Version: GnuPG v2.0
 
-iQIcBAEBCAAGBQJSuYGFAAoJELp701BxlEWfRlwP/06wzo8XjgLlPShHeHYPJol/
-EBzGnGP0GiMlXFnTfVM2c5MzRvINHzdYA7FhNPSL4bt6qEI1yobTYKR9dpo7vT6l
-suFKcswZltD6QgYcU+58YQt9BGcmD1knuTFzEYGmvQSn6+m7xkKRRbXIFla8lUvY
-SpQapmJnkdBR6dQFrIPT0txTw/rqq8zgX5x6ryEOHYZo5Xe/dtVZXHFNk4TxT0WU
-LQNnT7pf7ZnKsiWEFGJ8EttsFVNprZ7/JAu2DO2oz+mUT22aLASxyuwFOQrCq33Z
-GN4y7ishVMhbTZP+L/l7zh7/rbLn5lXhEuqwppxeYiJNPaGegD2wVpjBk9m3mpi1
-Meqf0mVNzR+ma7xX45A15BTMUtjyGL3845/EnamBW/RGAMJqhKBpZTeCDxxQ0cG4
-u0Ic4SMjtFu+zSzzZQCU3af+sISThyq1uBTjkU3qHf/BhgpLiy6GuNrPrpavgU1y
-IOz6+H2mdaVV/4xGTUmWGkrwWRpFX+ZXsfCrwnCWIEwkAWAl7zuh2/kFRTojE+BO
-oEhEFG1nf7sR54IJttr/YhYZrTbffP63RKu0BeY5QbtWUJeQIkxCjt4FpfXkQdNT
-K09FQ1Ip5RXqqBv1JiKvVxIU1Rg56+EWmYBdIe9TwjPlTadBdBO5+x3tjcHhev/c
-tgi0fSs6kMHWkG9zm2wZ
-=s2Dr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+=XlmU
 -----END PGP SIGNATURE-----
diff --git a/sci-chemistry/oasis/oasis-4.0-r2.ebuild b/sci-chemistry/oasis/oasis-4.0-r2.ebuild
deleted file mode 100644 (file)
index 5b1f95a..0000000
--- a/sci-chemistry/oasis/oasis-4.0-r2.ebuild
+++ /dev/null
@@ -1,73 +0,0 @@
-# Copyright 1999-2012 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/oasis/oasis-4.0-r2.ebuild,v 1.13 2012/10/19 10:04:45 jlec Exp $
-
-EAPI=3
-
-inherit eutils fortran-2 multilib toolchain-funcs
-
-MY_P="${PN}${PV}_Linux"
-
-DESCRIPTION="A direct-method program for SAD/SIR phasing"
-HOMEPAGE="http://cryst.iphy.ac.cn/Project/protein/protein-I.html"
-SRC_URI="http://dev.gentooexperimental.org/~jlec/distfiles/${MY_P}.zip"
-
-SLOT="0"
-KEYWORDS="amd64 ~ppc x86 ~amd64-linux ~x86-linux"
-LICENSE="ccp4 oasis"
-IUSE="examples +minimal"
-
-RDEPEND="
-       !dev-ml/oasis
-       sci-chemistry/ccp4-apps
-       sci-chemistry/pymol
-       sci-libs/mmdb
-       sci-visualization/gnuplot
-       !minimal? (
-               sci-chemistry/solve-resolve-bin
-               sci-chemistry/arp-warp-bin
-       )"
-DEPEND="${RDEPEND}
-       sci-libs/ccp4-libs"
-
-S="${WORKDIR}"/${MY_P}
-
-src_prepare() {
-       rm bin/{fnp2fp,gnuplot,oasis4-0,seq} || die
-       epatch "${FILESDIR}"/${PV}-makefile.patch
-}
-
-src_compile() {
-       emake \
-               -C src \
-               F77="$(tc-getFC)" \
-               CFLAGS="${FFLAGS}" \
-               CCP4_LIB="${EPREFIX}/usr/$(get_libdir)" \
-               Linux || die
-}
-
-src_install() {
-       exeinto /usr/libexec/ccp4/bin/
-       doexe src/{${PN},fnp2fp} || die
-       dosym ../libexec/ccp4/bin/${PN} /usr/bin/${PN}
-       dosym ../libexec/ccp4/bin/fnp2fp /usr/bin/fnp2fp
-
-       exeinto /usr/$(get_libdir)/${PN}
-       doexe bin/*.*sh || die
-
-       insinto /usr/share/doc/${PF}/html
-       doins bin/html/* || die
-       dosym ../../share/doc/${PF}/html /usr/$(get_libdir)/${PN}/html
-       chmod 755 "${ED}"/usr/share/doc/${PF}/html/*.{*sh,awk} || die
-
-       if use examples; then
-               insinto /usr/share/${PN}
-               doins -r examples || die
-       fi
-
-       cat >> "${T}"/25oasis <<- EOF
-       oasisbin="${EPREFIX}/usr/$(get_libdir)/${PN}"
-       EOF
-
-       doenvd "${T}"/25oasis
-}
diff --git a/sci-chemistry/oasis/oasis-4.0-r3.ebuild b/sci-chemistry/oasis/oasis-4.0-r3.ebuild
index a7726f948a484482133b5e76bb583e064f28e703..b7ec6733af2c8f03566770222dce1e74d5383fc3 100644 (file)
--- a/sci-chemistry/oasis/oasis-4.0-r3.ebuild
+++ b/sci-chemistry/oasis/oasis-4.0-r3.ebuild
@@ -1,6 +1,6 @@
-# Copyright 1999-2013 Gentoo Foundation
+# Copyright 1999-2015 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/oasis/oasis-4.0-r3.ebuild,v 1.6 2013/12/24 12:43:46 ago Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/oasis/oasis-4.0-r3.ebuild,v 1.7 2015/03/09 13:33:02 jlec Exp $
 
 EAPI=5
 
@@ -10,7 +10,7 @@ MY_P="${PN}${PV}_Linux"
 
 DESCRIPTION="A direct-method program for SAD/SIR phasing"
 HOMEPAGE="http://cryst.iphy.ac.cn/Project/protein/protein-I.html"
-SRC_URI="http://dev.gentooexperimental.org/~jlec/distfiles/${MY_P}.zip"
+SRC_URI="http://dev.gentoo.org/~jlec/distfiles/${MY_P}.zip"
 
 SLOT="0"
 KEYWORDS="amd64 ~ppc x86 ~amd64-linux ~x86-linux"
@@ -20,7 +20,7 @@ IUSE="examples +minimal"
 RDEPEND="
        sci-chemistry/ccp4-apps
        sci-chemistry/pymol
-       sci-libs/mmdb
+       sci-libs/mmdb:0
        sci-visualization/gnuplot
        !minimal? (
                sci-chemistry/solve-resolve-bin
Unnamed repository; edit this file 'description' to name the repository.