From d9c00ebce3975a6b704bce30dad702a21f3b94bf Mon Sep 17 00:00:00 2001 From: "W. Trevor King" Date: Fri, 28 Jun 2013 07:42:02 -0400 Subject: [PATCH] blurb/abstract.tex: Change pyafm -> unfold-protein and remove Na+ The NaCl data had a small number of noisy unfolding events, which weren't particularly convincing, so they're not in the final thesis. Instead of mentioning pyafm here, cut straight to the top-level unfold-protein package, since that's where the experiment control happens. --- src/blurb/abstract.tex | 11 ++++++----- 1 file changed, 6 insertions(+), 5 deletions(-) diff --git a/src/blurb/abstract.tex b/src/blurb/abstract.tex index a5540b7..f65fda4 100644 --- a/src/blurb/abstract.tex +++ b/src/blurb/abstract.tex @@ -14,11 +14,12 @@ correction factors, etc.\ were used in a particular paper. \nomenclature[text ]{SMFS}{Single molecule force spectroscopy.} In this thesis, I introduce an SMFS sofware suite for cantilever -calibration (\calibcant), experiment control (\pyafm), analysis -(\Hooke), and postprocessing (\sawsim) in the context of velocity -clamp unfolding of I27 octomers in buffers with varying concentrations -of \Na\ and \Ca\ ions\citep{calibcant,pyafm,sandal09,king10}. All of -the tools are licensed under open source licenses, which allows SMFS +calibration (\calibcant), experiment control (\unfoldprotein), +analysis (\Hooke), and postprocessing (\sawsim) in the context of +velocity clamp unfolding of I27 octomers in buffers with varying +concentrations of +\CaCl\citep{calibcant,unfold-protein,sandal09,king10}. All of the +tools are licensed under open source licenses, which allows SMFS researchers to centralize future development. Where possible, care has been taken to keep these packages operating system (OS) agnostic. The experiment logic in \pyafm\ and \calibcant\ is still nominally OS -- 2.26.2