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Add pysawsim.test submodule (currently empty).
[sawsim.git] / pysawsim /
2010-11-05 W. Trevor KingAdd pysawsim.test submodule (currently empty). tree | commitdiff
2010-11-04 W. Trevor KingMoved testing/common/fit.py to pysawsim/fit.py and... tree | commitdiff
2010-11-04 W. Trevor KingMerge remote branch 'pub/master' tree | commitdiff
2010-11-04 W. Trevor KingDisable epilog line wrapping in pysawsim/parameter_erro... tree | commitdiff
2010-11-02 W. Trevor KingBetter pysawsim.sawsim.SAWSIM detection via distutils... tree | commitdiff
2010-10-29 W. Trevor KingUse numpy.ndarray.sum() vs. __builtin__.sum() to comput... tree | commitdiff
2010-10-27 W. Trevor KingPython FAQ GIL link should point to GIL blurb, not... tree | commitdiff
2010-10-27 W. Trevor KingMerge remote branch 'borg/master' tree | commitdiff
2010-10-27 W. Trevor King-m/--manager now defaults to auto-select. tree | commitdiff
2010-10-27 W. Trevor KingAdd ability to import a default manager with get_manager(). tree | commitdiff
2010-10-27 W. Trevor Kingpysawsim/parameter_error.py should not be executable. tree | commitdiff
2010-10-27 W. Trevor KingAdd support for nosetests multiprocessing plugin. tree | commitdiff
2010-10-27 W. Trevor KingUse single-quote delimited strings when possssible. tree | commitdiff
2010-10-27 W. Trevor KingHistogramMatcher should not plot residual comparisons... tree | commitdiff
2010-10-27 W. Trevor KingAdded bin/sawsim_param_error.py and pysawsim/parameter_... tree | commitdiff
2010-10-27 W. Trevor KingAssorted minor cleanups to pysawsim/parameter_scan.py. tree | commitdiff
2010-10-26 W. Trevor KingRemove some more velocity-specific cruft from pysawsim... tree | commitdiff
2010-10-26 W. Trevor Kingparameter_scan.py no longer needs to import anything... tree | commitdiff
2010-10-24 W. Trevor KingPrint the CommandError of failed sawsim executions. tree | commitdiff
2010-10-24 W. Trevor KingSave CommandError in failed InvokeJobs. tree | commitdiff
2010-10-24 W. Trevor KingAdd pysawsim.invoke.CommandError.__repr__() method... tree | commitdiff
2010-10-24 W. Trevor KingMake pysawsim.invoke.CommandError picklable, and add... tree | commitdiff
2010-10-24 W. Trevor KingFix cache shuffling (random.shuffle() shuffles in place... tree | commitdiff
2010-10-24 W. Trevor KingMove __version__ import from sawsim_histogram to sawsim... tree | commitdiff
2010-10-23 W. Trevor KingAdd namedtuple definition from Python 2.6's collections... tree | commitdiff
2010-10-23 W. Trevor KingMove `import with_statement` from sawsim_histogram... tree | commitdiff
2010-10-23 W. Trevor KingReplace EXAMPLE_HISTOGRAM_FILE_CONTENTS histograms... tree | commitdiff
2010-10-23 W. Trevor KingAdd epilogs to each OptionParser in pysawsim. tree | commitdiff
2010-10-23 W. Trevor KingMove sawsim running into a new pysawsim.sawsim.SawsimRu... tree | commitdiff
2010-10-21 W. Trevor KingAdd 'mpi' to pysawsim.manager.MANAGERS. tree | commitdiff
2010-10-21 W. Trevor KingRelax command-not-found doctest messages. tree | commitdiff
2010-10-21 W. Trevor KingMerge branch 'master' of physics.drexel.edu/~wking... tree | commitdiff
2010-10-21 W. Trevor KingFix dropped receive during ThreadManager._spawn_jobs. tree | commitdiff
2010-10-20 W. Trevor KingMerge branch 'master' of ssh://wking@einstein/~/public_... tree | commitdiff
2010-10-20 W. Trevor KingDisable pysawsim.manager.subproc is multiprocessing... tree | commitdiff
2010-10-20 W. Trevor KingWork around namedtuple import for Pythons < 2.6. tree | commitdiff
2010-10-20 W. Trevor KingWork around missing MPD with a more elaborate pysawsim... tree | commitdiff
2010-10-20 W. Trevor KingAdd pysawsim.manager.mpi with an mpi4py-based manager. tree | commitdiff
2010-10-20 W. Trevor KingAdd link to Python wiki's parallel processing page. tree | commitdiff
2010-10-20 W. Trevor KingAdjust pysawsim.manager.pbs to skip most doctests if... tree | commitdiff
2010-10-20 W. Trevor KingRemove execute permission from pysawsim/manager/pbs.py. tree | commitdiff
2010-10-20 W. Trevor KingAdd pysawsim.manager.subproc using subprocessing. tree | commitdiff
2010-10-20 W. Trevor KingAdd pysawsim.sawsim.main() and bin/sawsim_hist.py calli... tree | commitdiff
2010-10-20 W. Trevor KingAdd Histogram.to_stream() and .headings. tree | commitdiff
2010-10-20 W. Trevor KingFix 'intil_state' -> 'initial_state' typo in pysawsim... tree | commitdiff
2010-10-20 W. Trevor KingAdd Histogram.calculate_bin_edges(). tree | commitdiff
2010-10-20 W. Trevor KingReduce ThreadManager default worker_thread to 2. tree | commitdiff
2010-10-20 W. Trevor KingAdd --sawsim option to velocity_dependant_scan.main(). tree | commitdiff
2010-10-20 W. Trevor KingAllow Job status logging when .status is an Exception. tree | commitdiff
2010-10-20 W. Trevor KingAllow Job.__str__() to work when .id == None. tree | commitdiff
2010-10-20 W. Trevor KingTeardown manager after use in velocity_dependant_scan... tree | commitdiff
2010-10-20 W. Trevor KingAdd --clean-cache option to velocity_dependant_scan... tree | commitdiff
2010-10-20 W. Trevor KingNo need for `if __name__ == '__main__'` in velocity_dep... tree | commitdiff
2010-10-20 W. Trevor KingRearrange velocity_dependant_scan.main() to group resid... tree | commitdiff
2010-10-20 W. Trevor KingPass velocity_dependant_scan.main() --manager through... tree | commitdiff
2010-10-20 W. Trevor KingReposition matplotlib.use() call in velocity_dependant_... tree | commitdiff
2010-10-20 W. Trevor KingFix sawsim_histogram imports in velocity_dependant_scan.py. tree | commitdiff
2010-10-20 W. Trevor KingAdd --manager option to velocity_dependant_scan.py. tree | commitdiff
2010-10-20 W. Trevor KingAdd pysawsim.manager.SUBMODS and .IsSubclass and .get_m... tree | commitdiff
2010-10-20 W. Trevor KingTransition more of the pysawsim framework into Python. tree | commitdiff
2010-10-20 W. Trevor KingAdd pysawsim.sawsim module. tree | commitdiff
2010-10-19 W. Trevor KingMove 'qwait' to pysawsim.manager.pbs and add the rest... tree | commitdiff
2010-10-19 W. Trevor KingFix a few deadlock errors in pysawsim.manager.thread. tree | commitdiff
2010-10-19 W. Trevor KingMove Histogram class from fit_force_histogram to new... tree | commitdiff
2010-10-19 W. Trevor KingJobManager.async_invoke() should accept Job instances. tree | commitdiff
2010-10-19 W. Trevor KingAdd pysawsim.manager and pysawsim.manager.thread for... tree | commitdiff
2010-10-18 W. Trevor KingAdd pysawsim/__init__.py and break invoke out into... tree | commitdiff
2010-10-18 W. Trevor KingIntroduce pysawsim in the README and add fit_force_hist... tree | commitdiff
Sawsim, a Monte Carlo, mechanical protein unfolding simulator.