X-Git-Url: http://git.tremily.us/?p=hooke.git;a=blobdiff_plain;f=doc%2Ftutorial.txt;h=714c59716e60fc5c8d238e0c72bd78766525af81;hp=b3cfa65d2c9428e5cfcbbc54d58dd0f3b1f88559;hb=9f4b5f7dc5f5dd55d69d0cc98cfc38708e09a246;hpb=27e3126d3b4ecd3aaeff898b0994b402810c221f

diff --git a/doc/tutorial.txt b/doc/tutorial.txt
index b3cfa65..714c597 100644
--- a/doc/tutorial.txt
+++ b/doc/tutorial.txt
@@ -223,11 +223,10 @@ to :file:`hooke.log`.
 Usually curves you annotated are useful later.  You can create a
 playlist for only annotated curves with
 
-    hooke> note_filter_playlist --name c:\curves\nice.hkp
+    hooke> note_filter_playlist --output_playlist nice_list
 
-will create sub-playlist :file:`c:\curves\nice.hkp`.  Make sure that
-the target directory (here :file:`c:\curves\`) already exists before
-doing that.
+will create sub-playlist `nice_list`.  Remember to save the new list
+if you like it.
 
 If you change your mind about a note, you can remove it by setting a
 blank note string with ``set_note ''``.
@@ -239,9 +238,13 @@ You can export Hooke curves as images and as text columns. To export
 as images or text, use the ``export_block`` command.  Supported
 formats are PNG (Portable Network Graphic, raster) and EPS
 (Encapsulated Postscript, vector).  The export format is determined by
-the filename extension, so ``export_block foo.png``, ``export_block
-foo.eps``, and ``export_block foo.txt`` will save PNG, EPS, and
-TAB-delimited text files respectively.
+the filename extension, so ``export_block --output foo.png``,
+``export_block --output foo.eps``, and ``export_block --output
+foo.txt`` will save PNG, EPS, and TAB-delimited text files
+respectively.
+
+.. todo:: Currently no PNG or EPS output, use the GUI and the plot
+  panel's toolbar for non-text exports.
 
 .. todo:: Multiple cycles in exported data?  Solution: blank lines for
   "breaks", add option to extract specific sections using Python's
@@ -269,6 +272,8 @@ you click a point, a blue dot should appear.  When you click the
 second point, the distances will appear in the output panel.  If you
 want to know the coordinates of a single point, left click on it.
 
+.. todo:: Add description of ``delta``'s command line interface.
+
 Hooke automatically adjusts the position of the clicked point to the
 nearest point in the graph, so you will be always measuring distances
 and forces between points in the graph.
@@ -276,6 +281,8 @@ and forces between points in the graph.
 Worm like chain and freely jointed chain fitting
 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 
+.. todo:: Update WLC fitting tutorial section.
+
 You can measure by hand the parameters relative to a force peak using
 a worm-like chain fitting with the ``fit`` command.  The command by
 default automatically finds the contact point, asks for two points
@@ -290,6 +297,7 @@ line for details.
 
 Multiple curve fitting and measuring
 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
+.. todo:: Update multiple curve fitting tutorial section.
 
 You can cycle through all your current playlist obtaining WLC fit, FJC
 fit, rupture force and slope (loading rate) information from each
@@ -302,6 +310,8 @@ current curve before fitting all the files in your playlist, use
 Fast curve reviewing and saving
 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 
+.. todo:: Update curve review tutorial section.
+
 When automatic routines are not good enough to filter your data, use
 ``review`` command to cycle through your playlist presenting ten
 curves in the same graph.  You can then enter the numbers of the
@@ -314,5 +324,6 @@ Configuring Hooke
 You can set environment variables to influence the behaviour of
 Hooke. The command to use is ``set_config``.  Use ``get_config`` to
 read a particular option and ``print_config`` to display the entire
-configuration file.  Any changes to the configuration will be saved
-when you exit Hooke, see :doc:`config` for details.
+configuration file.  To save changes, either run ``save_config`` or
+start Hooke with the ``--save-config`` option.  See :doc:`config` for
+details.