# Copyright (C) 2010 W. Trevor King # # This file is part of Hooke. # # Hooke is free software: you can redistribute it and/or modify it # under the terms of the GNU Lesser General Public License as # published by the Free Software Foundation, either version 3 of the # License, or (at your option) any later version. # # Hooke is distributed in the hope that it will be useful, but WITHOUT # ANY WARRANTY; without even the implied warranty of MERCHANTABILITY # or FITNESS FOR A PARTICULAR PURPOSE. See the GNU Lesser General # Public License for more details. # # You should have received a copy of the GNU Lesser General Public # License along with Hooke. If not, see # . """Define :class:`Experiment` and assorted subclasses. This allows :class:`hooke.plugin.Plugin`\s to specify the types of experiments they can handle. """ class Experiment (object): """Base class for experiment classification. """ pass class ForceClamp (Experiment): """Constant force force spectroscopy [#fernandez2004]_. .. [#fernandez2004] J.M. Fernandez, H. Li. "Force-Clamp Spectroscopy Monitors the Folding Trajectory of a Single Protein." Science, 2004. doi: `10.1126/science.1092497 `_ """ pass class VelocityClamp (Experiment): """Constant piezo velocity force spectroscopy [#rief1997]_. .. [#rief1997] M. Rief, M. Gautel, F. Oesterhelt, J.M. Fernandez, H.E. Gaub. "Reversible Unfolding of Individual Titin Immunoglobulin Domains by AFM." Science, 1997. doi: `10.1126/science.276.5315.1109 `_ """ pass class TwoColorCoincidenceDetection (Experiment): """Two-color fluorescence coincidence spectroscopy [#clarke2007]_. .. [#clarke2007] R.W. Clarke, A. Orte, D. Klenerman. "Optimized Threshold Selection for Single-Molecule Two-Color Fluorescence Coincidence Spectroscopy." Anal. Chem., 2007. doi: `10.1021/ac062188w `_ """ pass