.. -*- coding: utf-8 -*- What it is ========== It is a software for the (semiautomatic) analysis and filtering of force curves. Force curves are the output of an analytical technique called force spectroscopy. A force spectroscopy experiment usually requires the analysis of thousands of force curves at a time. As of today, there is no standard, free software for the analysis of force curves. Hooke aims to solve that. What it does ============ * View, annotate, measure force curves * Worm-like chain and freely-jointed chain fit of force peaks * Automatic convolution-based filtering of empty curves * Automatic fit and measurement of multiple force peaks * Handles force-clamp force experiments (experimental) * It is extensible by users by mean of plugins and drivers See `Hooke's Google Code homepage`_ for more details. How it works ============ See the ``doc/tutorial.txt`` file distributed with Hooke, or the `online docs`__. __ docs_ Where it's published ==================== Sandal M, Benedetti F, Brucale M, Gomez-Casado A, Samorì B. "Hooke: an open software platform for force spectroscopy." Bioinformatics, 2009 25(11):1428-1430. doi:10.1093/bioinformatics/btp180 Please cite Hooke if you use it. Troubleshooting =============== If you have troubles in using it, before throwing it in the trash: 1. Search the `issue tracker`_. 2. Look at the `troubleshooting wiki page`_. 3. Search the `discussion group`_. 4. Ask a question in the discussion group. 5. File a bug on the issue tracker. Disclaimer ========== Remember that Hooke is still experimental software! It has been mostly done to fit the needs of its authors, and there is no guarantee it will do what you need. However, you can write us/help us improve it so that it does. We aim to make of Hooke a robust tool that can help your research. Source ====== Hooke is available as a Git_ repository:: $ git clone git://tremily.us/hooke.git See the docs_ for installation details. Licensing ========= Hooke is released under the GNU Lesser General Public License, either version 3 of the License (``COPYING`` and ``COPYING.LESSER``), or (at your option) any later version. .. _Hooke's Google Code homepage: http://code.google.com/p/hooke/ .. _docs: http://hooke.tremily.us/ .. _issue tracker: http://code.google.com/p/hooke/issues/list .. _troubleshooting wiki page: http://code.google.com/p/hooke/wiki/TroubleShooting .. _discussion group: http://groups.google.com/group/hookesoftware .. _Git: http://git-scm.com/