From d0952993cd67c8895a9f0d785c1ced13a93113e3 Mon Sep 17 00:00:00 2001 From: "W. Trevor King" Date: Mon, 18 Oct 2010 14:00:18 -0400 Subject: [PATCH] Corrections to sawsim.bib after earlier pybtex run. Remove extra quotes from around author values fixed in pybtex revision: wking@drexel.edu-20101016180914-98tpuw47ojcl4zsf Unwrap broken MCarrion-Vazquez macro. pybtex shouldn't break macros after a '-' character, but it does as of now. --- src/sawsim.bib | 318 ++++++++++++++++++++++++------------------------- 1 file changed, 159 insertions(+), 159 deletions(-) diff --git a/src/sawsim.bib b/src/sawsim.bib index 129db60..965d575 100644 --- a/src/sawsim.bib +++ b/src/sawsim.bib @@ -333,8 +333,8 @@ @string{KJvanVliet = "van Vliet, Krystyn J."} @article { balsera97, - author = {MBalsera #" and "# SStepaniants #" and "# SIzrailev #" and "# - YOono #" and "# KSchulten}, + author = MBalsera #" and "# SStepaniants #" and "# SIzrailev #" and "# + YOono #" and "# KSchulten, title = "Reconstructing potential energy functions from simulated force- induced unbinding processes.", year = 1997, @@ -365,7 +365,7 @@ } @article { baneyx02, - author = {GBaneyx #" and "# LBaugh #" and "# VVogel}, + author = GBaneyx #" and "# LBaugh #" and "# VVogel, title = "{Supramolecular Chemistry And Self-assembly Special Feature: Fibronectin extension and unfolding within cell matrix fibrils controlled by cytoskeletal tension}", @@ -406,7 +406,7 @@ } @article { basche01, - author = {TBasche #" and "# SNie #" and "# JMFernandez}, + author = TBasche #" and "# SNie #" and "# JMFernandez, title = "{Single molecules}", year = 2001, journal = PNAS, @@ -419,7 +419,7 @@ } @article { bechhoefer02, - author = {JBechhoefer #" and "# SWilson}, + author = JBechhoefer #" and "# SWilson, title = "Faster, cheaper, safer optical tweezers for the undergraduate laboratory", collaboration = "", @@ -442,7 +442,7 @@ } @article { bell78, - author = "GIBell", + author = GIBell, title = "Models for the specific adhesion of cells to cells.", year = 1978, month = may, @@ -475,8 +475,8 @@ } @article { best02, - author = {RBBest #" and "# SBFowler #" and "# JLToca-Herrera #" and "# - JClarke}, + author = RBBest #" and "# SBFowler #" and "# JLToca-Herrera #" and "# + JClarke, title = "{A simple method for probing the mechanical unfolding pathway of proteins in detail}", year = 2002, @@ -507,7 +507,7 @@ } @article { braverman08, - author = {EBraverman #" and "# RMamdani}, + author = EBraverman #" and "# RMamdani, title = "Continuous versus pulse harvesting for population models in constant and variable environment.", year = 2008, @@ -534,9 +534,9 @@ } @article { brockwell02, - author = {DJBrockwell #" and "# GSBeddard #" and "# JClarkson #" and "# + author = DJBrockwell #" and "# GSBeddard #" and "# JClarkson #" and "# RCZinober #" and "# AWBlake #" and "# JTrinick #" and "# PDOlmsted #" - and "# DASmith #" and "# SERadford}, + and "# DASmith #" and "# SERadford, title = "The effect of core destabilization on the mechanical resistance of {I27}.", year = 2002, @@ -577,8 +577,8 @@ } @article { brower-toland02, - author = {BDBrower-Toland #" and "# CLSmith #" and "# RCYeh #" and "# JTLis - #" and "# CLPeterson #" and "# MDWang}, + author = BDBrower-Toland #" and "# CLSmith #" and "# RCYeh #" and "# JTLis + #" and "# CLPeterson #" and "# MDWang, title = "{From the Cover: Mechanical disruption of individual nucleosomes reveals a reversible multistage release of DNA}", year = 2002, @@ -603,7 +603,7 @@ } @article { bryngelson87, - author = {JDBryngelson #" and "# PGWolynes}, + author = JDBryngelson #" and "# PGWolynes, title = "Spin glasses and the statistical mechanics of protein folding.", year = 1987, month = nov, @@ -624,8 +624,8 @@ } @article { bryngelson95, - author = {JDBryngelson #" and "# JNOnuchic #" and "# NDSocci #" and "# - PGWolynes}, + author = JDBryngelson #" and "# JNOnuchic #" and "# NDSocci #" and "# + PGWolynes, title = "Funnels, pathways, and the energy landscape of protein folding: a synthesis.", year = 1995, @@ -668,8 +668,8 @@ } @article { bullard06, - author = {BBullard #" and "# TGarcia #" and "# VBenes #" and "# MCLeake #" - and "# WALinke #" and "# AFOberhauser}, + author = BBullard #" and "# TGarcia #" and "# VBenes #" and "# MCLeake #" + and "# WALinke #" and "# AFOberhauser, title = "{The molecular elasticity of the insect flight muscle proteins projectin and kettin}", year = 2006, @@ -701,8 +701,8 @@ } @article { bustamante94, - author = {CBustamante #" and "# JFMarko #" and "# EDSiggia #" and "# - SSmith}, + author = CBustamante #" and "# JFMarko #" and "# EDSiggia #" and "# + SSmith, title = "Entropic elasticity of lambda-phage {DNA}.", year = 1994, month = sep, @@ -718,8 +718,8 @@ } @article { bustanji03, - author = {YBustanji #" and "# CRArciola #" and "# MConti #" and "# - EMandello #" and "# LMontanaro #" and "# BSamori}, + author = YBustanji #" and "# CRArciola #" and "# MConti #" and "# + EMandello #" and "# LMontanaro #" and "# BSamori, title = "{Dynamics of the interaction between a fibronectin molecule and a living bacterium under mechanical force}", year = 2003, @@ -758,7 +758,7 @@ } @article { cao07, - author = {YCao #" and "# MMBalamurali #" and "# DSharma #" and "# HLi}, + author = YCao #" and "# MMBalamurali #" and "# DSharma #" and "# HLi, title = "{A functional single-molecule binding assay via force spectroscopy}", year = 2007, @@ -798,8 +798,8 @@ } @article { carl01, - author = {PCarl #" and "# CHKwok #" and "# GManderson #" and "# DWSpeicher - #" and "# DEDischer}, + author = PCarl #" and "# CHKwok #" and "# GManderson #" and "# DWSpeicher + #" and "# DEDischer, title = "{Forced unfolding modulated by disulfide bonds in the Ig domains of a cell adhesion molecule}", year = 2001, @@ -814,9 +814,9 @@ } @article { carrion-vazquez99a, - author = {MCarrion-Vazquez #" and "# AFOberhauser #" and "# SBFowler #" and + author = MCarrion-Vazquez #" and "# AFOberhauser #" and "# SBFowler #" and "# PEMarszalek #" and "# SEBroedel #" and "# JClarke #" and "# - JMFernandez}, + JMFernandez, title = "Mechanical and chemical unfolding of a single protein: A comparison", year = 1999, @@ -832,8 +832,8 @@ } @article { carrion-vazquez99b, - author = {MCarrion-Vazquez #" and "# PEMarszalek #" and "# AFOberhauser #" - and "# JMFernandez}, + author = MCarrion-Vazquez #" and "# PEMarszalek #" and "# AFOberhauser #" + and "# JMFernandez, title = "Atomic force microscopy captures length phenotypes in single proteins", year = 1999, @@ -850,7 +850,7 @@ } @book { cowan98, - author = "GCowan", + author = GCowan, title = "Statistical Data Analysis", year = 1998, publisher = OUP, @@ -860,7 +860,7 @@ } @article { craig01, - author = {DCraig #" and "# AKrammer #" and "# KSchulten #" and "# VVogel}, + author = DCraig #" and "# AKrammer #" and "# KSchulten #" and "# VVogel, title = "{Comparison of the early stages of forced unfolding for fibronectin type III modules}", year = 2001, @@ -875,7 +875,7 @@ } @article { dietz04, - author = {HDietz #" and "# MRief}, + author = HDietz #" and "# MRief, title = "{Exploring the energy landscape of GFP by single-molecule mechanical experiments}", year = 2004, @@ -913,7 +913,7 @@ } @article { dietz06a, - author = {HDietz #" and "# FBerkemeier #" and "# MBertz #" and "# MRief}, + author = HDietz #" and "# FBerkemeier #" and "# MBertz #" and "# MRief, title = "{Anisotropic deformation response of single protein molecules}", year = 2006, journal = PNAS, @@ -942,7 +942,7 @@ } @article { dietz06b, - author = {HDietz #" and "# MRief}, + author = HDietz #" and "# MRief, title = "{Protein structure by mechanical triangulation}", year = 2006, journal = PNAS, @@ -967,7 +967,7 @@ } @article { dietz07, - author = {HDietz #" and "# MRief}, + author = HDietz #" and "# MRief, title = "Detecting Molecular Fingerprints in Single Molecule Force Spectroscopy Using Pattern Recognition", year = 2007, @@ -994,7 +994,7 @@ } @article { discher06, - author = {DEDischer #" and "# NBhasin #" and "# CPJohnson}, + author = DEDischer #" and "# NBhasin #" and "# CPJohnson, title = "{Covalent chemistry on distended proteins}", year = 2006, journal = PNAS, @@ -1007,8 +1007,8 @@ } @article { dudko03, - author = {OKDudko #" and "# AEFilippov #" and "# JKlafter #" and "# - MUrbakh}, + author = OKDudko #" and "# AEFilippov #" and "# JKlafter #" and "# + MUrbakh, title = "Beyond the conventional description of dynamic force spectroscopy of adhesion bonds.", year = 2003, @@ -1038,7 +1038,7 @@ } @article { dudko06, - author = {OKDudko #" and "# GHummer #" and "# ASzabo}, + author = OKDudko #" and "# GHummer #" and "# ASzabo, title = "Intrinsic rates and activation free energies from single-molecule pulling experiments.", year = 2006, @@ -1068,8 +1068,8 @@ } @article { dudko07, - author = {OKDudko #" and "# JMathe #" and "# ASzabo #" and "# AMeller #" - and "# GHummer}, + author = OKDudko #" and "# JMathe #" and "# ASzabo #" and "# AMeller #" + and "# GHummer, title = "Extracting kinetics from single-molecule force spectroscopy: nanopore unzipping of {DNA} hairpins.", year = 2007, @@ -1108,7 +1108,7 @@ } @article { evans97, - author = {EEvans #" and "# KRitchie}, + author = EEvans #" and "# KRitchie, title = "Dynamic strength of molecular adhesion bonds.", year = 1997, month = apr, @@ -1160,7 +1160,7 @@ } @article { evans99, - author = {EEvans #" and "# KRitchie}, + author = EEvans #" and "# KRitchie, title = "Strength of a weak bond connecting flexible polymer chains.", year = 1999, month = may, @@ -1206,8 +1206,8 @@ } @book { galassi05, - author = {MGalassi #" and "# JDavies #" and "# JTheiler #" and "# BGough #" - and "# GJungman #" and "# MBooth #" and "# FRossi}, + author = MGalassi #" and "# JDavies #" and "# JTheiler #" and "# BGough #" + and "# GJungman #" and "# MBooth #" and "# FRossi, title = "{GNU} Scientific Library: Reference Manual", year = 2005, edition = "Second Revised", @@ -1225,8 +1225,8 @@ } @article { gao03, - author = {MGao #" and "# DCraig #" and "# OLequin #" and "# IDCampbell #" - and "# VVogel #" and "# KSchulten}, + author = MGao #" and "# DCraig #" and "# OLequin #" and "# IDCampbell #" + and "# VVogel #" and "# KSchulten, title = "{Structure and functional significance of mechanically unfolded fibronectin type III1 intermediates}", year = 2003, @@ -1254,7 +1254,7 @@ } @article { gavrilov01, - author = {LAGavrilov #" and "# NSGavrilova}, + author = LAGavrilov #" and "# NSGavrilova, title = "The reliability theory of aging and longevity.", year = 2001, month = dec, @@ -1301,8 +1301,8 @@ } @article { gergely00, - author = {CGergely #" and "# JCVoegel #" and "# PSchaaf #" and "# BSenger - #" and "# MMaaloum #" and "# JKHHorber #" and "# JHemmerle}, + author = CGergely #" and "# JCVoegel #" and "# PSchaaf #" and "# BSenger + #" and "# MMaaloum #" and "# JKHHorber #" and "# JHemmerle, title = "{Unbinding process of adsorbed proteins under external stress studied by atomic force microscopy spectroscopy}", year = 2000, @@ -1316,7 +1316,7 @@ } @article { gompertz25, - author = "BGompertz", + author = BGompertz, title = "On the Nature of the Function Expressive of the Law of Human Mortality, and on a New Mode of Determining the Value of Life Contingencies", @@ -1333,7 +1333,7 @@ } @article { grossman05, - author = {CGrossman #" and "# AStout}, + author = CGrossman #" and "# AStout, title = "Optical Tweezers Advanced Lab", year = 2005, season = "Fall", @@ -1351,7 +1351,7 @@ } @article { hanggi90, - author = {PHanggi #" and "# PTalkner #" and "# MBorkovec}, + author = PHanggi #" and "# PTalkner #" and "# MBorkovec, title = "Reaction-rate theory: fifty years after Kramers", year = 1990, month = "Apr", @@ -1370,7 +1370,7 @@ } @article { hatfield99, - author = {JWHatfield #" and "# SRQuake}, + author = JWHatfield #" and "# SRQuake, title = "Dynamic Properties of an Extended Polymer in Solution", year = 1999, month = "Apr", @@ -1387,7 +1387,7 @@ } @article { heymann00, - author = {BHeymann #" and "# HGrubmuller}, + author = BHeymann #" and "# HGrubmuller, title = "Dynamic force spectroscopy of molecular adhesion bonds.", year = 2000, month = jun, @@ -1414,7 +1414,7 @@ } @article { hummer01, - author = {GHummer #" and "# ASzabo}, + author = GHummer #" and "# ASzabo, title = "{From the Cover: Free energy reconstruction from nonequilibrium single-molecule pulling experiments}", year = 2001, @@ -1428,7 +1428,7 @@ } @article { hummer03, - author = {GHummer #" and "# ASzabo}, + author = GHummer #" and "# ASzabo, title = "Kinetics from nonequilibrium single-molecule pulling experiments.", year = 2003, month = jul, @@ -1466,7 +1466,7 @@ } @article { hutter93, - author = {JLHutter #" and "# JBechhoefer}, + author = JLHutter #" and "# JBechhoefer, title = "Calibration of atomic-force microscope tips", collaboration = "", year = 1993, @@ -1484,7 +1484,7 @@ } @article { hyeon03, - author = {CHyeon #" and "# DThirumalai}, + author = CHyeon #" and "# DThirumalai, title = "Can energy landscape roughness of proteins and {RNA} be measured by using mechanical unfolding experiments?", year = 2003, @@ -1517,7 +1517,7 @@ } @article { irback05, - author = {AIrback #" and "# SMitternacht #" and "# SMohanty}, + author = AIrback #" and "# SMitternacht #" and "# SMohanty, title = "{Dissecting the mechanical unfolding of ubiquitin}", year = 2005, journal = PNAS, @@ -1546,8 +1546,8 @@ } @article { izrailev97, - author = {SIzrailev #" and "# SStepaniants #" and "# MBalsera #" and "# - YOono #" and "# KSchulten}, + author = SIzrailev #" and "# SStepaniants #" and "# MBalsera #" and "# + YOono #" and "# KSchulten, title = "Molecular dynamics study of unbinding of the avidin-biotin complex.", year = 1997, @@ -1585,7 +1585,7 @@ } @article { juckett93, - author = {DAJuckett #" and "# BRosenberg}, + author = DAJuckett #" and "# BRosenberg, title = "Comparison of the Gompertz and Weibull functions as descriptors for human mortality distributions and their intersections.", year = 1993, @@ -1621,7 +1621,7 @@ } @article { king09, - author = {WTKing #" and "# GYang}, + author = WTKing #" and "# GYang, title = "Effects of Cantilever Stiffness on Unfolding Force in {AFM} Protein Unfolding", year = 2009, @@ -1631,7 +1631,7 @@ } @article { kleiner07, - author = {AKleiner #" and "# EShakhnovich}, + author = AKleiner #" and "# EShakhnovich, title = "The mechanical unfolding of ubiquitin through all-atom Monte Carlo simulation with a Go-type potential.", year = 2007, @@ -1667,7 +1667,7 @@ } @article { klimov00, - author = {DKKlimov #" and "# DThirumalai}, + author = DKKlimov #" and "# DThirumalai, title = "{Native topology determines force-induced unfolding pathways in globular proteins}", year = 2000, @@ -1711,7 +1711,7 @@ } @article { kosztin06, - author = {IKosztin #" and "# BBarz #" and "# LJanosi}, + author = IKosztin #" and "# BBarz #" and "# LJanosi, title = "Calculating potentials of mean force and diffusion coefficients from nonequilibrium processes without Jarzynski's equality.", year = 2006, @@ -1726,7 +1726,7 @@ } @article { kramers40, - author = "HAKramers", + author = HAKramers, title = "Brownian motion in a field of force and the diffusion model of chemical reactions.", year = 1940, @@ -1748,7 +1748,7 @@ } @article { kroy07, - author = {KKroy #" and "# JGlaser}, + author = KKroy #" and "# JGlaser, title = "The glassy wormlike chain", year = 2007, journal = NJP, @@ -1775,9 +1775,9 @@ } @article { labeit03, - author = {DLabeit #" and "# KWatanabe #" and "# CWitt #" and "# HFujita #" + author = DLabeit #" and "# KWatanabe #" and "# CWitt #" and "# HFujita #" and "# YWu #" and "# SLahmers #" and "# TFunck #" and "# SLabeit #" and - "# HGranzier}, + "# HGranzier, title = "Calcium-dependent molecular spring elements in the giant protein titin", year = 2003, @@ -1805,8 +1805,8 @@ } @article { li00, - author = {HLi #" and "# AFOberhauser #" and "# SBFowler #" and "# JClarke - #" and "# JMFernandez}, + author = HLi #" and "# AFOberhauser #" and "# SBFowler #" and "# JClarke + #" and "# JMFernandez, title = "{Atomic force microscopy reveals the mechanical design of a modular protein}", year = 2000, @@ -1821,8 +1821,8 @@ } @article { li01, - author = {HLi #" and "# AFOberhauser #" and "# SDRedick #" and "# MCarrion- - Vazquez #" and "# HPErickson #" and "# JMFernandez}, + author = HLi #" and "# AFOberhauser #" and "# SDRedick #" and "# + MCarrion-Vazquez #" and "# HPErickson #" and "# JMFernandez, title = "{Multiple conformations of PEVK proteins detected by single- molecule techniques}", year = 2001, @@ -1853,7 +1853,7 @@ } @article { li06, - author = {MSLi #" and "# CKHu #" and "# DKKlimov #" and "# DThirumalai}, + author = MSLi #" and "# CKHu #" and "# DKKlimov #" and "# DThirumalai, title = "{Multiple stepwise refolding of immunoglobulin domain I27 upon force quench depends on initial conditions}", year = 2006, @@ -1888,8 +1888,8 @@ } @article { liu03, - author = {WLiu #" and "# VMontana #" and "# ERChapman #" and "# UMohideen - #" and "# VParpura}, + author = WLiu #" and "# VMontana #" and "# ERChapman #" and "# UMohideen + #" and "# VParpura, title = "{Botulinum toxin type B micromechanosensor}", year = 2003, journal = PNAS, @@ -1919,7 +1919,7 @@ } @article { makarov01, - author = {DEMakarov #" and "# PKHansma #" and "# HMetiu}, + author = DEMakarov #" and "# PKHansma #" and "# HMetiu, title = "Kinetic Monte Carlo simulation of titin unfolding", collaboration = "", year = 2001, @@ -1938,7 +1938,7 @@ } @article { marko95, - author = {JFMarko #" and "# EDSiggia}, + author = JFMarko #" and "# EDSiggia, title = "Stretching {DNA}", affiliation = "", year = 1995, @@ -1957,8 +1957,8 @@ } @article { marszalek02, - author = {PEMarszalek #" and "# HLi #" and "# AFOberhauser #" and "# - JMFernandez}, + author = PEMarszalek #" and "# HLi #" and "# AFOberhauser #" and "# + JMFernandez, title = "{Chair-boat transitions in single polysaccharide molecules observed with force-ramp AFM}", year = 2002, @@ -1994,7 +1994,7 @@ } @article { mello04, - author = {CCMello #" and "# DBarrick}, + author = CCMello #" and "# DBarrick, title = "An experimentally determined protein folding energy landscape.", year = 2004, month = sep, @@ -2028,8 +2028,8 @@ } @article { mickler07, - author = {MMickler #" and "# RIDima #" and "# HDietz #" and "# CHyeon #" - and "# DThirumalai #" and "# MRief}, + author = MMickler #" and "# RIDima #" and "# HDietz #" and "# CHyeon #" + and "# DThirumalai #" and "# MRief, title = "Revealing the bifurcation in the unfolding pathways of {GFP} by using single-molecule experiments and simulations", year = 2007, @@ -2072,9 +2072,9 @@ } @article { nevo03, - author = {RNevo #" and "# CStroh #" and "# FKienberger #" and "# DKaftan #" + author = RNevo #" and "# CStroh #" and "# FKienberger #" and "# DKaftan #" and "# VBrumfeld #" and "# MElbaum #" and "# ZReich #" and "# - PHinterdorfer}, + PHinterdorfer, title = "A molecular switch between alternative conformational states in the complex of Ran and importin beta1.", year = 2003, @@ -2108,8 +2108,8 @@ } @article { nevo04, - author = {RNevo #" and "# VBrumfeld #" and "# MElbaum #" and "# - PHinterdorfer #" and "# ZReich}, + author = RNevo #" and "# VBrumfeld #" and "# MElbaum #" and "# + PHinterdorfer #" and "# ZReich, title = "Direct discrimination between models of protein activation by single-molecule force measurements.", year = 2004, @@ -2144,8 +2144,8 @@ } @article { nevo05, - author = {RNevo #" and "# VBrumfeld #" and "# RKapon #" and "# - PHinterdorfer #" and "# ZReich}, + author = RNevo #" and "# VBrumfeld #" and "# RKapon #" and "# + PHinterdorfer #" and "# ZReich, title = "Direct measurement of protein energy landscape roughness.", year = 2005, month = may, @@ -2176,9 +2176,9 @@ } @article { ng07, - author = {SPNg #" and "# KSBillings #" and "# TOhashi #" and "# MDAllen #" + author = SPNg #" and "# KSBillings #" and "# TOhashi #" and "# MDAllen #" and "# RBBest #" and "# LGRandles #" and "# HPErickson #" and "# - JClarke}, + JClarke, title = "{Designing an extracellular matrix protein with enhanced mechanical stability}", year = 2007, @@ -2213,7 +2213,7 @@ } @article { nome07, - author = {RANome #" and "# JMZhao #" and "# WDHoff #" and "# NFScherer}, + author = RANome #" and "# JMZhao #" and "# WDHoff #" and "# NFScherer, title = "Axis-dependent anisotropy in protein unfolding from integrated nonequilibrium single-molecule experiments, analysis, and simulation", year = 2007, @@ -2258,7 +2258,7 @@ } @article { nummela07, - author = {JNummela #" and "# IAndricioaei}, + author = JNummela #" and "# IAndricioaei, title = "{Exact Low-Force Kinetics from High-Force Single-Molecule Unfolding Events}", year = 2007, @@ -2292,8 +2292,8 @@ } @article { oberhauser01, - author = {AFOberhauser #" and "# PKHansma #" and "# MCarrion-Vazquez #" and - "# JMFernandez}, + author = AFOberhauser #" and "# PKHansma #" and "# MCarrion-Vazquez #" and + "# JMFernandez, title = "{Stepwise unfolding of titin under force-clamp atomic force microscopy}", year = 2001, @@ -2308,7 +2308,7 @@ } @article { olshansky97, - author = {SJOlshansky #" and "# BACarnes}, + author = SJOlshansky #" and "# BACarnes, title = "Ever since Gompertz.", year = 1997, month = feb, @@ -2342,8 +2342,8 @@ } @article { onuchic96, - author = {JNOnuchic #" and "# NDSocci #" and "# ZLuthey-Schulten #" and "# - PGWolynes}, + author = JNOnuchic #" and "# NDSocci #" and "# ZLuthey-Schulten #" and "# + PGWolynes, title = "Protein folding funnels: the nature of the transition state ensemble.", year = 1996, @@ -2386,8 +2386,8 @@ } @article { opitz03, - author = {CAOpitz #" and "# MKulke #" and "# MCLeake #" and "# CNeagoe #" - and "# HHinssen #" and "# RJHajjar #" and "# WALinke}, + author = CAOpitz #" and "# MKulke #" and "# MCLeake #" and "# CNeagoe #" + and "# HHinssen #" and "# RJHajjar #" and "# WALinke, title = "{Damped elastic recoil of the titin spring in myofibrils of human myocardium}", year = 2003, @@ -2429,8 +2429,8 @@ } @article { oroudjev02, - author = {EOroudjev #" and "# JSoares #" and "# SArcidiacono #" and "# - JBThompson #" and "# SAFossey #" and "# HGHansma}, + author = EOroudjev #" and "# JSoares #" and "# SArcidiacono #" and "# + JBThompson #" and "# SAFossey #" and "# HGHansma, title = "{Segmented nanofibers of spider dragline silk: Atomic force microscopy and single-molecule force spectroscopy}", year = 2002, @@ -2466,7 +2466,7 @@ } @article { paci00, - author = {EPaci #" and "# MKarplus}, + author = EPaci #" and "# MKarplus, title = "{Unfolding proteins by external forces and temperature: The importance of topology and energetics}", year = 2000, @@ -2480,7 +2480,7 @@ } @article { peng08, - author = {QPeng #" and "# HLi}, + author = QPeng #" and "# HLi, title = "{Atomic force microscopy reveals parallel mechanical unfolding pathways of T4 lysozyme: Evidence for a kinetic partitioning mechanism}", @@ -2520,8 +2520,8 @@ } @book { press92, - author = {WPress #" and "# STeukolsky #" and "# WVetterling #" and "# - BFlannery}, + author = WPress #" and "# STeukolsky #" and "# WVetterling #" and "# + BFlannery, title = "Numerical Recipies in {C}: The Art of Scientific Computing", year = 1992, edition = 2, @@ -2534,8 +2534,8 @@ } @article { raible04, - author = {MRaible #" and "# MEvstigneev #" and "# PReimann #" and "# - FWBartels #" and "# RRos}, + author = MRaible #" and "# MEvstigneev #" and "# PReimann #" and "# + FWBartels #" and "# RRos, title = "Theoretical analysis of dynamic force spectroscopy experiments on ligand-receptor complexes.", year = 2004, @@ -2565,9 +2565,9 @@ } @article { raible06, - author = {MRaible #" and "# MEvstigneev #" and "# FWBartels #" and "# + author = MRaible #" and "# MEvstigneev #" and "# FWBartels #" and "# REckel #" and "# MNguyen-Duong #" and "# RMerkel #" and "# RRos #" and - "# DAnselmetti #" and "# PReimann}, + "# DAnselmetti #" and "# PReimann, title = "Theoretical analysis of single-molecule force spectroscopy experiments: heterogeneity of chemical bonds.", year = 2006, @@ -2592,7 +2592,7 @@ } @article { rief02, - author = {MRief #" and "# HGrubmuller}, + author = MRief #" and "# HGrubmuller, title = "Force spectroscopy of single biomolecules.", year = 2002, month = mar, @@ -2622,7 +2622,7 @@ } @book { rief65, - author = "FRief", + author = FRief, title = "Fundamentals of Statistical and Thermal Physics", year = 1965, publisher = McGraw-Hill, @@ -2632,8 +2632,8 @@ } @article { rief97, - author = {MRief #" and "# MGautel #" and "# FOesterhelt #" and "# - JMFernandez #" and "# HEGaub}, + author = MRief #" and "# MGautel #" and "# FOesterhelt #" and "# + JMFernandez #" and "# HEGaub, title = "{Reversible Unfolding of Individual Titin Immunoglobulin Domains by AFM}", year = 1997, @@ -2653,7 +2653,7 @@ } @article { rief98, - author = {MRief #" and "# JMFernandez #" and "# HEGaub}, + author = MRief #" and "# JMFernandez #" and "# HEGaub, title = "Elastically Coupled Two-Level Systems as a Model for Biopolymer Extensibility", year = 1998, @@ -2669,7 +2669,7 @@ } @article { sarkar04, - author = {ASarkar #" and "# RBRobertson #" and "# JMFernandez}, + author = ASarkar #" and "# RBRobertson #" and "# JMFernandez, title = "{Simultaneous atomic force microscope and fluorescence measurements of protein unfolding using a calibrated evanescent wave}", year = 2004, @@ -2695,7 +2695,7 @@ } @article { sato05, - author = {TSato #" and "# MEsaki #" and "# JMFernandez #" and "# TEndo}, + author = TSato #" and "# MEsaki #" and "# JMFernandez #" and "# TEndo, title = "{Comparison of the protein-unfolding pathways between mitochondrial protein import and atomic-force microscopy measurements}", year = 2005, @@ -2723,7 +2723,7 @@ } @article { schlierf04, - author = {MSchlierf #" and "# HLi #" and "# JMFernandez}, + author = MSchlierf #" and "# HLi #" and "# JMFernandez, title = "{The unfolding kinetics of ubiquitin captured with single-molecule force-clamp techniques}", year = 2004, @@ -2756,7 +2756,7 @@ } @article { schlierf06, - author = {MSchlierf #" and "# MRief}, + author = MSchlierf #" and "# MRief, title = "Single-molecule unfolding force distributions reveal a funnel- shaped energy landscape.", year = 2006, @@ -2796,8 +2796,8 @@ } @article { schwaiger04, - author = {ISchwaiger #" and "# AKardinal #" and "# MSchleicher #" and "# - AANoegel #" and "# MRief}, + author = ISchwaiger #" and "# AKardinal #" and "# MSchleicher #" and "# + AANoegel #" and "# MRief, title = "A mechanical unfolding intermediate in an actin-crosslinking protein.", year = 2004, @@ -2837,8 +2837,8 @@ } @article { schwaiger05, - author = {ISchwaiger #" and "# MSchleicher #" and "# AANoegel #" and "# - MRief}, + author = ISchwaiger #" and "# MSchleicher #" and "# AANoegel #" and "# + MRief, title = "The folding pathway of a fast-folding immunoglobulin domain revealed by single-molecule mechanical experiments.", year = 2005, @@ -2874,8 +2874,8 @@ } @article { sharma07, - author = {DSharma #" and "# OPerisic #" and "# QPeng #" and "# YCao #" and - "# CLam #" and "# HLu #" and "# HLi}, + author = DSharma #" and "# OPerisic #" and "# QPeng #" and "# YCao #" and + "# CLam #" and "# HLu #" and "# HLi, title = "{Single-molecule force spectroscopy reveals a mechanically stable protein fold and the rational tuning of its mechanical stability}", year = 2007, @@ -2915,7 +2915,7 @@ } @article { sheng05, - author = {YJSheng #" and "# SJiang #" and "# HKTsao}, + author = YJSheng #" and "# SJiang #" and "# HKTsao, title = "Forced Kramers escape in single-molecule pulling experiments", collaboration = "", year = 2005, @@ -2934,7 +2934,7 @@ } @article { shillcock98, - author = {JShillcock #" and "# USeifert}, + author = JShillcock #" and "# USeifert, title = "Escape from a metastable well under a time-ramped force", year = 1998, month = "Jun", @@ -2951,7 +2951,7 @@ } @article { socci96, - author = {NDSocci #" and "# JNOnuchic #" and "# PGWolynes}, + author = NDSocci #" and "# JNOnuchic #" and "# PGWolynes, title = "Diffusive dynamics of the reaction coordinate for protein folding funnels", collaboration = "", @@ -2980,8 +2980,8 @@ } @article { strunz99, - author = {TStrunz #" and "# KOroszlan #" and "# RSchafer #" and "# - HJGuntherodt}, + author = TStrunz #" and "# KOroszlan #" and "# RSchafer #" and "# + HJGuntherodt, title = "{Dynamic force spectroscopy of single DNA molecules}", year = 1999, journal = PNAS, @@ -2994,7 +2994,7 @@ } @misc { sw:check, - author = {AMalec #" and "# CPickett #" and "# FHugosson #" and "# RLemmen}, + author = AMalec #" and "# CPickett #" and "# FHugosson #" and "# RLemmen, key = "sw:check", title = "Check", year = 2006, @@ -3011,7 +3011,7 @@ } @misc { sw:noweb, - author = "NRamsey", + author = NRamsey, key = "sw:noweb", title = "Noweb", year = 1997, @@ -3024,7 +3024,7 @@ } @misc { sw:python, - author = {GvanRossum #" and "# others}, + author = GvanRossum #" and "# others, key = "sw:python", title = "Python", year = 2007, @@ -3036,7 +3036,7 @@ } @misc { sw:scipy, - author = {EJones #" and "# TOliphant #" and "# PPeterson #" and "# others}, + author = EJones #" and "# TOliphant #" and "# PPeterson #" and "# others, key = "sw:scipy", title = "{SciPy}: Open source scientific tools for {Python}", year = "2001--", @@ -3044,7 +3044,7 @@ } @article { szabo80, - author = {ASzabo #" and "# KSchulten #" and "# ZSchulten}, + author = ASzabo #" and "# KSchulten #" and "# ZSchulten, title = "First passage time approach to diffusion controlled reactions", collaboration = "", year = 1980, @@ -3060,8 +3060,8 @@ } @article { talaga00, - author = {DSTalaga #" and "# WLLau #" and "# HRoder #" and "# JTang #" and - "# YJia #" and "# WFDeGrado #" and "# RMHochstrasser}, + author = DSTalaga #" and "# WLLau #" and "# HRoder #" and "# JTang #" and + "# YJia #" and "# WFDeGrado #" and "# RMHochstrasser, title = "{Dynamics and folding of single two-stranded coiled-coil peptides studied by fluorescent energy transfer confocal microscopy}", year = 2000, @@ -3075,7 +3075,7 @@ } @article { thirumalai05, - author = {DThirumalai #" and "# CHyeon}, + author = DThirumalai #" and "# CHyeon, title = "{RNA} and Protein Folding: Common Themes and Variations", affiliation = "Biophysics Program, and Department of Chemistry and Biochemistry, Institute for Physical Science and Technology, University @@ -3115,7 +3115,7 @@ } @article { tlusty98, - author = {TTlusty #" and "# AMeller #" and "# RBar-Ziv}, + author = TTlusty #" and "# AMeller #" and "# RBar-Ziv, title = "Optical Gradient Forces of Strongly Localized Fields", year = 1998, month = aug, @@ -3138,7 +3138,7 @@ } @book { vanKampen07, - author = "NGvanKampen", + author = NGvanKampen, title = "Stochastic Processes in Physics and Chemistry", year = 2007, edition = 3, @@ -3149,8 +3149,8 @@ } @article { walther07, - author = {KAWalther #" and "# FGrater #" and "# LDougan #" and "# CLBadilla - #" and "# BJBerne #" and "# JMFernandez}, + author = KAWalther #" and "# FGrater #" and "# LDougan #" and "# CLBadilla + #" and "# BJBerne #" and "# JMFernandez, title = "{Signatures of hydrophobic collapse in extended proteins captured with force spectroscopy}", year = 2007, @@ -3176,7 +3176,7 @@ } @article { walton08, - author = {EBWalton #" and "# SLee #" and "# KJvanVliet}, + author = EBWalton #" and "# SLee #" and "# KJvanVliet, title = "Extending Bell's model: how force transducer stiffness alters measured unbinding forces and kinetics of molecular complexes.", year = 2008, @@ -3223,8 +3223,8 @@ } @article { wiita06, - author = {APWiita #" and "# SRKAinavarapu #" and "# HHHuang #" and "# - JMFernandez}, + author = APWiita #" and "# SRKAinavarapu #" and "# HHHuang #" and "# + JMFernandez, title = "{From the Cover: Force-dependent chemical kinetics of disulfide bond reduction observed with single-molecule techniques}", year = 2006, @@ -3268,8 +3268,8 @@ } @article { wilcox05, - author = {AJWilcox #" and "# JChoy #" and "# CBustamante #" and "# - AMatouschek}, + author = AJWilcox #" and "# JChoy #" and "# CBustamante #" and "# + AMatouschek, title = "{Effect of protein structure on mitochondrial import}", year = 2005, journal = PNAS, @@ -3301,7 +3301,7 @@ } @article { wu04, - author = {JWWu #" and "# WLHung #" and "# CHTsai}, + author = JWWu #" and "# WLHung #" and "# CHTsai, title = "Estimation of parameters of the {G}ompertz distribution using the least squares method.", year = 2004, @@ -3332,9 +3332,9 @@ } @article { yang00, - author = {GYang #" and "# CCecconi #" and "# WABaase #" and "# IRVetter #" + author = GYang #" and "# CCecconi #" and "# WABaase #" and "# IRVetter #" and "# WABreyer #" and "# JAHaack #" and "# BWMatthews #" and "# - FWDahlquist #" and "# CBustamante}, + FWDahlquist #" and "# CBustamante, title = "{Solid-state synthesis and mechanical unfolding of polymers of T4 lysozyme}", year = 2000, @@ -3348,7 +3348,7 @@ } @article { yang06, - author = {YYang #" and "# FCLin #" and "# GYang}, + author = YYang #" and "# FCLin #" and "# GYang, title = "Temperature control device for single molecule measurements using the atomic force microscope", collaboration = "", @@ -3369,7 +3369,7 @@ } @article { yu06, - author = {WYu #" and "# JCLamb #" and "# FHan #" and "# JABirchler}, + author = WYu #" and "# JCLamb #" and "# FHan #" and "# JABirchler, title = "{Telomere-mediated chromosomal truncation in maize}", year = 2006, journal = PNAS, @@ -3403,8 +3403,8 @@ } @article { zhao06, - author = {JMZhao #" and "# HLee #" and "# RANome #" and "# SMajid #" and "# - NFScherer #" and "# WDHoff}, + author = JMZhao #" and "# HLee #" and "# RANome #" and "# SMajid #" and "# + NFScherer #" and "# WDHoff, title = "{Single-molecule detection of structural changes during Per-Arnt- Sim (PAS) domain activation}", year = 2006, @@ -3439,7 +3439,7 @@ } @article { zhuang06, - author = {WZhuang #" and "# DAbramavicius #" and "# SMukamel}, + author = WZhuang #" and "# DAbramavicius #" and "# SMukamel, title = "{Two-dimensional vibrational optical probes for peptide fast folding investigation}", year = 2006, @@ -3463,8 +3463,8 @@ } @article { zinober02, - author = {RCZinober #" and "# DJBrockwell #" and "# GSBeddard #" and "# - AWBlake #" and "# PDOlmsted #" and "# SERadford #" and "# DASmith}, + author = RCZinober #" and "# DJBrockwell #" and "# GSBeddard #" and "# + AWBlake #" and "# PDOlmsted #" and "# SERadford #" and "# DASmith, title = "Mechanically unfolding proteins: the effect of unfolding history and the supramolecular scaffold.", year = 2002, -- 2.26.2