From 97acfed35ef46fa0fa615157f2bd7bb28543e340 Mon Sep 17 00:00:00 2001 From: "W. Trevor King" Date: Fri, 21 Jun 2013 08:25:09 -0400 Subject: [PATCH] apparatus/procedure.tex: Add red/blue examples to sec:sawsim:tension:wlc Thanks, Prof. Cruz. --- src/apparatus/procedure.tex | 19 ++++++++++--------- 1 file changed, 10 insertions(+), 9 deletions(-) diff --git a/src/apparatus/procedure.tex b/src/apparatus/procedure.tex index d34b175..0b8b7b6 100644 --- a/src/apparatus/procedure.tex +++ b/src/apparatus/procedure.tex @@ -52,14 +52,15 @@ multi-domain test proteins. extension of the unfolded polymer, and $x_f=x_{f1}+x_{f2}$ is the extension of the folded polymer. \protect\subref{fig:expt-sawtooth} An experimental force curve - from stretching a ubiquitin polymer with the rising parts of the - peaks fitted to the WLC\index{WLC} model - (\cref{sec:sawsim:tension:wlc})\citep{chyan04}. The pulling speed - used was $1\U{$\mu$m/s}$. The irregular features at the beginning - of the curve are due to nonspecific interactions between the tip - and the substrate surface, and the last high force peak is caused - by the detachment of the polymer from the tip or the substrate - surface. Note that the abscissa is the extension of the protein - chain $x_t-x_c$.\label{fig:procedure}} + from stretching a ubiquitin polymer (\tikzline{red}) with the + rising parts of the peaks fitted to the WLC\index{WLC} model + (\tikzline{blue}, \cref{sec:sawsim:tension:wlc})\citep{chyan04}. + The pulling speed used was $1\U{$\mu$m/s}$. The irregular + features at the beginning of the curve are due to nonspecific + interactions between the tip and the substrate surface, and the + last high force peak is caused by the detachment of the polymer + from the tip or the substrate surface. Note that the abscissa is + the extension of the protein chain + $x_t-x_c$.\label{fig:procedure}} \end{center} \end{figure} -- 2.26.2