From 8cc7f9a89b3eb03af30f812cfc393f43949e6c5e Mon Sep 17 00:00:00 2001 From: Justin Lecher Date: Sun, 20 Sep 2015 12:39:08 +0200 Subject: [PATCH] sci-chemistry/probe: Drop old obsoletes Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=556806 Package-Manager: portage-2.2.20.1 Signed-off-by: Justin Lecher --- sci-chemistry/probe/Manifest | 1 - .../probe/files/2.12.110413-as-needed.patch | 38 ------------------- sci-chemistry/probe/probe-2.12.110413.ebuild | 38 ------------------- 3 files changed, 77 deletions(-) delete mode 100644 sci-chemistry/probe/files/2.12.110413-as-needed.patch delete mode 100644 sci-chemistry/probe/probe-2.12.110413.ebuild diff --git a/sci-chemistry/probe/Manifest b/sci-chemistry/probe/Manifest index f5dd9226d404..a22c524edb82 100644 --- a/sci-chemistry/probe/Manifest +++ b/sci-chemistry/probe/Manifest @@ -1,2 +1 @@ -DIST probe.2.12.110413.src.zip 262460 SHA256 90cd0a693683958a8ac05d13a47c2b464f2939df24369bf5c568f59913756de4 SHA512 ac6a92f1666d1819c0dede5ea97113c9e03271c42b829d88a2b65041dec7f853441fc61e94e48782078884a9a69c1043432ca3576768d31bfe9190d3ea1da4c8 WHIRLPOOL f6e6ec43016d14114ae5cbfdbfd1cdb5bdf0c6a1c34742b0fef0cfe5ee39409a41b4b2127fbefe526d66d99c33b91ef5e3ea4c9de33784f9ea493700e8bc8784 DIST probe.2.13.110909.src.zip 131063 SHA256 df14b76d27a7c43b2b57c315d0ad71cdf6acc7943c43195a797162be7816fa71 SHA512 5efa066873d0e139da66bf8edb541fe42df94e99cab171ad8d06a8a6f5caada982ef5b18481e748b224dbed86f63c99237d04ecd107c82855b44de91fb6d2b16 WHIRLPOOL 12f6fefe1b03b71268f39fa3aa7ad796230c76c2e029b8dc86955abd43c8e3f09f7591f84cd79c7ba11037d5b323c922ddf36abf6911d556981f5cc21378912f diff --git a/sci-chemistry/probe/files/2.12.110413-as-needed.patch b/sci-chemistry/probe/files/2.12.110413-as-needed.patch deleted file mode 100644 index 95368625505d..000000000000 --- a/sci-chemistry/probe/files/2.12.110413-as-needed.patch +++ /dev/null @@ -1,38 +0,0 @@ - Makefile | 13 ++++++------- - 1 files changed, 6 insertions(+), 7 deletions(-) - -diff --git a/Makefile b/Makefile -index e6a740e..8f74d6a 100644 ---- a/Makefile -+++ b/Makefile -@@ -1,14 +1,12 @@ --MACHINEFLAGS = --CFLAGS = $(MACHINEFLAGS) --LFLAGS = -lm $(MACHINEFLAGS) -+LIBS = -lm - OBJLIST = dots.o abin.o readPDBrecs.o geom3d.o utility.o select.o \ -- parse.o atomprops.o stdconntable.o autobondrot.o -+ parse.o atomprops.o stdconntable.o autobondrot.o hybrid_36_c.o - - .c.o: -- cc -c $*.c $(CFLAGS) -+ $(CC) $(CFLAGS) -c $*.c - - probe: probe.o $(OBJLIST) -- cc -o $@ probe.o $(OBJLIST) $(LFLAGS) -+ $(CC) $(CFLAGS) $(LDFLAGS) -o $@ probe.o $(OBJLIST) $(LIBS) - - clean: - @rm -f *.o *.ckp -@@ -30,9 +28,10 @@ parse.o: ./parse.h ./utility.h parse.c - probe.o: ./abin.h ./atomprops.h ./autobondrot.h ./dots.h ./geom3d.h \ - ./parse.h ./probe.h ./readPDBrecs.h ./select.h \ - ./stdconntable.h ./utility.h probe.c --readPDBrecs.o: ./geom3d.h ./readPDBrecs.h ./utility.h readPDBrecs.c -+readPDBrecs.o: ./geom3d.h ./readPDBrecs.h ./utility.h ./hybrid_36_c.h readPDBrecs.c - select.o: ./abin.h ./atomprops.h ./geom3d.h ./parse.h ./select.h \ - ./stdconntable.h ./utility.h select.c - stdconntable.o: ./stdconntable.h stdconntable.c - utility.o: utility.c -+hybrid_36_c.o: ./hybrid_36_c.h hybrid_36_c.c - # DO NOT DELETE THIS 2nd LINE -- make depend uses it diff --git a/sci-chemistry/probe/probe-2.12.110413.ebuild b/sci-chemistry/probe/probe-2.12.110413.ebuild deleted file mode 100644 index bb0a36a232de..000000000000 --- a/sci-chemistry/probe/probe-2.12.110413.ebuild +++ /dev/null @@ -1,38 +0,0 @@ -# Copyright 1999-2012 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 -# $Id$ - -EAPI=4 - -inherit eutils toolchain-funcs - -MY_P="${PN}.${PV}" - -DESCRIPTION="Evaluates atomic packing within or between molecules" -HOMEPAGE="http://kinemage.biochem.duke.edu/software/probe.php" -SRC_URI="http://kinemage.biochem.duke.edu/downloads/software/probe/${MY_P}.src.zip" - -SLOT="0" -LICENSE="richardson" -KEYWORDS="amd64 ppc x86 ~amd64-linux ~x86-linux ~x64-macos ~x86-macos" -IUSE="" - -RDEPEND="" -DEPEND="${RDEPEND} - app-arch/unzip" - -S="${WORKDIR}"/trunk - -src_prepare() { - epatch "${FILESDIR}"/${PV}-as-needed.patch - # Respect CC - sed -i \ - -e 's:cc:$(CC):g' \ - "${S}"/Makefile || die - tc-export CC -} - -src_install() { - dobin "${S}"/probe - dodoc "${S}"/README* -} -- 2.26.2