From 8587cc84a2e5e8155d40e823521fefdc9c6d7613 Mon Sep 17 00:00:00 2001
From: =?utf8?q?Micha=C5=82=20G=C3=B3rny?= <mgorny@gentoo.org>
Date: Wed, 8 Apr 2015 16:53:32 +0000
Subject: [PATCH] Restore -1503 that was just marked stable, bug #545982.

Package-Manager: portage-2.2.18/cvs/Linux x86_64
Manifest-Sign-Key: 0xEFB4464E!
---
 sci-biology/rebase/ChangeLog          |  7 +++-
 sci-biology/rebase/Manifest           | 38 +++++++++++-----------
 sci-biology/rebase/rebase-1503.ebuild | 46 +++++++++++++++++++++++++++
 3 files changed, 72 insertions(+), 19 deletions(-)
 create mode 100644 sci-biology/rebase/rebase-1503.ebuild

diff --git a/sci-biology/rebase/ChangeLog b/sci-biology/rebase/ChangeLog
index a57ba1db947e..c9987432d3f4 100644
--- a/sci-biology/rebase/ChangeLog
+++ b/sci-biology/rebase/ChangeLog
@@ -1,6 +1,11 @@
 # ChangeLog for sci-biology/rebase
 # Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/ChangeLog,v 1.153 2015/04/08 14:19:37 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/ChangeLog,v 1.154 2015/04/08 16:53:27 mgorny Exp $
+
+*rebase-1503 (08 Apr 2015)
+
+  08 Apr 2015; Michał Górny <mgorny@gentoo.org> +rebase-1503.ebuild:
+  Restore -1503 that was just marked stable, bug #545982.
 
   08 Apr 2015; Justin Lecher <jlec@gentoo.org> -rebase-1502.ebuild,
   -rebase-1503.ebuild:
diff --git a/sci-biology/rebase/Manifest b/sci-biology/rebase/Manifest
index 75d2ce908360..9f03a9c00b7f 100644
--- a/sci-biology/rebase/Manifest
+++ b/sci-biology/rebase/Manifest
@@ -1,26 +1,28 @@
 -----BEGIN PGP SIGNED MESSAGE-----
-Hash: SHA512
+Hash: SHA256
 
+DIST rebase-1503.tar.xz 67267924 SHA256 6f808fd86bcc13f92a6ca876fa910260fc50bce50ac4bbe04e8d87cd2f9a4822 SHA512 83f2b1f0b44cb674ca99e1a5a917cd55621d6cd33d2d4d0c635af1bc958c038e6e77f5d1e2d03623010eaecb2ae88d050829797d90cb7142b83f6baace4e4d96 WHIRLPOOL 2e267cd39c626d61d33b37625c9bc56f8f83a84bfa709ac37790b90a400bf2b6e5577c34d7ced6db747dc37fb2aa72071da1e254ba185e81574eac301abd42a6
 DIST rebase-1504.tar.xz 69726880 SHA256 70b02c6f4f51b091c31685cc6df5a0442f5fde258cd57d143b6c81a9d2f23190 SHA512 6b35b872bd5e1ee1a7cac72b7caccc03d13ce20e426a05e6c557353c067f6737b82de926dcf0dac5bcffe1c5ff72c76ce3e237d2df7044a7dfb5e930316edc42 WHIRLPOOL 5c72ce616e70d1f47979e1335aa0a5ae22eabad59d5cede5446a2c499a5e6127c4dd99ebb9e9ef09bf3c4b7bf439647e9fadf3e1b782e898039560a96cf6b65a
+EBUILD rebase-1503.ebuild 1204 SHA256 3051d5dcef35035541f5f195b99cd1e1229ddc3a5409dacb9e611e9e3fb63c30 SHA512 ffa8ef1eedde6c3094d2750ee8ae6d1c6f12bb8c9e1baa5354f84fa2b83ba72ad15e51d8125f1303922dfd08a1ffedb3a97febae6bfdaa87e99826ea3844a282 WHIRLPOOL f8ca53d7634a73927ab44bb48fbaffc69002534e6e1b0d659e0c5af2d8b1f2b1dc4cfcaf45d50fdc76e57378640634a849083f9ee12a1a9a7d532aefb8b463e6
 EBUILD rebase-1504.ebuild 1205 SHA256 cb576c293a83a1dff42ec70702a72987a32daa28cb2a1219362121942950b9b8 SHA512 7a5feb4d674ca766c42cfed17552428d5647863cbe69fecc830198521cafdef037ce245c0d12163dff297d451cd0eff0979971a6177e5b9e467c40d6f1ff1406 WHIRLPOOL 3aec57502d2f9c68442265165151a20ae772b8f1bb050d418d0efbfd8816c5ba24d554ee29da3db87b10c6a38c5323474ad114e0e3e7935aec6f32f460280ec4
-MISC ChangeLog 19336 SHA256 e39c65ccd6ab89e13567469415a342217f80ba3a8ab955237046a5c601214785 SHA512 292c5fcc3dafdf705ffefbf59b735853cfd56ce32e5bdac14fb04f6c62d15f19f519d618c8d903786b0eded7637e4e2ba9b8f6d96709deaa885c0111e5fa80ce WHIRLPOOL 5b031c349f187e16f0825825993b7843ea28134e3a29a8292151b6b94967193bc7faff5bea83415791cc7c77ffe488afa22f13fdc510bfd7510e9b324666c8f6
+MISC ChangeLog 19496 SHA256 d745bb02c5dbea476c76c220cf95a0275b505e0e61e1204656534728db8985af SHA512 f358f066308f3ef42398fc21a06a4d8b4fe2e2ebe739b0d8f7adde05805e01134de67c53cc51e2f2135f2d74cd47f18aeb962685a98f5ae42c040c879667de32 WHIRLPOOL 285ae9a782e152a346904206076325771e98072806b2fcced5f7f97e94ae9e762573c552fa22e146aaec3944767f848b9d4addc04409f018db0bd4bbd51e300e
 MISC metadata.xml 813 SHA256 392179fd31cd6876ae2e2501faa8b0733704f03d0414c3668fee1f74a8462e56 SHA512 cfbd842c417a0384b17428cf36d866acbac2f89fa1496f45a908cf0d885879b2318fd21a173dc0a8ddae81c00d1c5a5646296473e199ced9028daeb004bea42a WHIRLPOOL 21c9d1a421d157ae6848a6fd99996566a3b51309e246a4aee531b0abab88698a5323d35a22430d9a21f5803402beac917f5cd295f23651f3889304bbeb65d015
 -----BEGIN PGP SIGNATURE-----
-Version: GnuPG v2.0
+Version: GnuPG v2
 
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diff --git a/sci-biology/rebase/rebase-1503.ebuild b/sci-biology/rebase/rebase-1503.ebuild
new file mode 100644
index 000000000000..c1698349fee8
--- /dev/null
+++ b/sci-biology/rebase/rebase-1503.ebuild
@@ -0,0 +1,46 @@
+# Copyright 1999-2015 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/rebase/rebase-1503.ebuild,v 1.5 2015/04/08 16:53:27 mgorny Exp $
+
+EAPI=5
+
+MY_PV=${PV#1}
+
+DESCRIPTION="A restriction enzyme database"
+HOMEPAGE="http://rebase.neb.com"
+SRC_URI="http://dev.gentoo.org/~jlec/distfiles/${P}.tar.xz"
+
+SLOT="0"
+LICENSE="public-domain"
+KEYWORDS="amd64 ppc x86 ~amd64-linux ~x86-linux ~ppc-macos ~sparc-solaris ~x86-solaris"
+IUSE="emboss minimal"
+
+RDEPEND="emboss? ( >=sci-biology/emboss-5.0.0 )"
+DEPEND="${RDEPEND}"
+
+RESTRICT="binchecks strip"
+
+src_compile() {
+	if use emboss; then
+		echo; einfo "Indexing Rebase for usage with EMBOSS."
+		mkdir REBASE || die
+		EMBOSS_DATA="." rebaseextract -auto -infile withrefm.${MY_PV} \
+				-protofile proto.${MY_PV} -equivalences \
+				|| die "Indexing Rebase failed."
+		echo
+	fi
+}
+
+src_install() {
+	if ! use minimal; then
+		insinto /usr/share/${PN}
+		doins withrefm.${MY_PV} proto.${MY_PV}
+	fi
+	newdoc REBASE.DOC README
+	if use emboss; then
+		insinto /usr/share/EMBOSS/data/REBASE
+		doins REBASE/embossre.{enz,ref,sup}
+		insinto /usr/share/EMBOSS/data
+		doins REBASE/embossre.equ
+	fi
+}
-- 
2.26.2