From 722cc30f3d2c0ffe228518652ea8571f983efad3 Mon Sep 17 00:00:00 2001
From: "W. Trevor King" <wking@drexel.edu>
Date: Thu, 14 Oct 2010 09:58:59 -0400
Subject: [PATCH] Add examples/Marszalek_Fernandez_1999/titin_intermediate.sh.

---
 .../titin_intermediate.sh                       | 17 +++++++++++++++++
 1 file changed, 17 insertions(+)
 create mode 100644 examples/Marszalek_Fernandez_1999/titin_intermediate.sh

diff --git a/examples/Marszalek_Fernandez_1999/titin_intermediate.sh b/examples/Marszalek_Fernandez_1999/titin_intermediate.sh
new file mode 100644
index 0000000..6004a1d
--- /dev/null
+++ b/examples/Marszalek_Fernandez_1999/titin_intermediate.sh
@@ -0,0 +1,17 @@
+#!/bin/bash
+
+# rediculous parameters, but it vaguely resembles the Titin shoulder
+# from Marszalek...Fernandez 1999, "Mechanical unfolding intermediates
+# in titin modules.", Nature (402), 6757 p100.
+
+sawsim -v1e-6 \
+  -s cantilever,hooke,0.05 -N1 \
+  -s folded,null -N8 \
+  -s 'transition,wlc,{0.39e-9,1e-9}' \
+  -s 'unfolded,wlc,{0.39e-9,28e-9}' \
+  -s 'cantbind,null' -N1 \
+  -k 'folded,transition,bell,{1e-12,1e-9}' \
+  -k 'transition,folded,bell,{1e8,-1e-9}' \
+  -k 'transition,unfolded,bell,{3.3e-4,0.25e-9}' \
+  -k 'cantbind,unfolded,bell,{3.3e-6,0.25e-9}' \
+  -q cantbind -V
-- 
2.26.2