From 68dca1affa83df0be6577fd06e15386a42098768 Mon Sep 17 00:00:00 2001 From: albertogomcas Date: Thu, 6 May 2010 09:07:37 +0000 Subject: [PATCH] Fixes bad call to wlc/fjc fit --- autopeak.py | 13 ++++++++----- 1 file changed, 8 insertions(+), 5 deletions(-) diff --git a/autopeak.py b/autopeak.py index c6f5ee5..ed4cea8 100644 --- a/autopeak.py +++ b/autopeak.py @@ -99,6 +99,7 @@ class autopeakCommands: sigma_p_lengths=[] forces=[] slopes=[] + qstds=[] #pick up plot displayed_plot=self._get_displayed_plot(0) @@ -186,9 +187,9 @@ class autopeakCommands: if self.config['fit_function']=='wlc': - params, yfit, xfit, fit_errors = self.wlc_fit(points, displayed_plot.vectors[1][0], displayed_plot.vectors[1][1], pl_value, T, return_errors=True) + params, yfit, xfit, fit_errors, qstd = self.wlc_fit(points, displayed_plot.vectors[1][0], displayed_plot.vectors[1][1], pl_value, T, return_errors=True) elif self.config['fit_function']=='fjc': - params, yfit, xfit, fit_errors = self.fjc_fit(points, displayed_plot.vectors[1][0], displayed_plot.vectors[1][1], pl_value, T, return_errors=True) + params, yfit, xfit, fit_errors, qstd = self.fjc_fit(points, displayed_plot.vectors[1][0], displayed_plot.vectors[1][1], pl_value, T, return_errors=True) else: print 'Unknown fit function' print 'Please set fit_function as wlc or fjc' @@ -211,7 +212,8 @@ class autopeakCommands: sigma_p_lengths.append(0) sigma_c_lengths.append(fit_errors[0]*(1.0e+9)) forces.append(abs(y-avg)*(1.0e+12)) - slopes.append(slope) + slopes.append(slope) + qstds.append(qstd) #Add WLC fit lines to plot fitplot.add_set(xfit,yfit) if len(fitplot.styles)==0: @@ -229,7 +231,8 @@ class autopeakCommands: sigma_c_lengths.append(fit_errors[0]*(1.0e+9)) sigma_p_lengths.append(fit_errors[1]*(1.0e+9)) forces.append(abs(y-avg)*(1.0e+12)) - slopes.append(slope) + slopes.append(slope) + qstds.append(qstd) #Add WLC fit lines to plot fitplot.add_set(xfit,yfit) @@ -327,4 +330,4 @@ class autopeakCommands: f.close() self.do_note('autopeak') - \ No newline at end of file + -- 2.26.2