From 43d3cc973c18bee88e2c2d4b92cd875a5c5fabc1 Mon Sep 17 00:00:00 2001 From: "W. Trevor King" Date: Wed, 27 Jun 2012 01:02:14 -0400 Subject: [PATCH] Use \subref in unfolding schematic image. This is better than hardcoding subfigure references in the caption. --- src/apparatus/procedure.tex | 21 +++++++++++---------- 1 file changed, 11 insertions(+), 10 deletions(-) diff --git a/src/apparatus/procedure.tex b/src/apparatus/procedure.tex index adefad3..a1c5be4 100644 --- a/src/apparatus/procedure.tex +++ b/src/apparatus/procedure.tex @@ -39,16 +39,17 @@ multi-domain test proteins. \subfloat[][]{\asyinclude{figures/expt-sawtooth/expt-sawtooth}% \label{fig:expt-sawtooth}} % Possibly use carrion-vazquez00 figure 2 to show scale of afm tip - \caption{(a) Schematic of the experimental setup for mechanical - unfolding of proteins using an AFM (not to scale). An experiment - starts with the tip in contact with the substrate surface, which - is then moved away from the tip at a constant speed. $x_t$ is the - distance traveled by the substrate, $x_c$ is the cantilever - deflection, $x_u$ is the extension of the unfolded polymer, and - $x_f=x_{f1}+x_{f2}$ is the extension of the folded polymer. (b) - An experimental force curve from stretching a ubiquitin polymer - with the rising parts of the peaks fitted to the WLC\index{WLC} - model (\cref{sec:tension:wlc})\citep{chyan04}. The pulling speed + \caption{\subref{fig:unfolding-schematic} Schematic of the + experimental setup for mechanical unfolding of proteins using an + AFM (not to scale). An experiment starts with the tip in contact + with the substrate surface, which is then moved away from the tip + at a constant speed. $x_t$ is the distance traveled by the + substrate, $x_c$ is the cantilever deflection, $x_u$ is the + extension of the unfolded polymer, and $x_f=x_{f1}+x_{f2}$ is the + extension of the folded polymer. \subref{fig:expt-sawtooth} An + experimental force curve from stretching a ubiquitin polymer with + the rising parts of the peaks fitted to the WLC\index{WLC} model + (\cref{sec:sawsim:tension:wlc})\citep{chyan04}. The pulling speed used was $1\U{$\mu$m/s}$. The irregular features at the beginning of the curve are due to nonspecific interactions between the tip and the substrate surface, and the last high force peak is caused -- 2.26.2