From 3db8567364e68e366bbda75791146e1679950d55 Mon Sep 17 00:00:00 2001 From: Olivier Fisette Date: Tue, 14 Dec 2004 00:49:03 +0000 Subject: [PATCH] New version: 412. Added 411 to x86. --- app-sci/rebase/ChangeLog | 8 +++++- app-sci/rebase/files/digest-rebase-412 | 1 + app-sci/rebase/rebase-411.ebuild | 4 +-- app-sci/rebase/rebase-412.ebuild | 35 ++++++++++++++++++++++++++ 4 files changed, 45 insertions(+), 3 deletions(-) create mode 100644 app-sci/rebase/files/digest-rebase-412 create mode 100644 app-sci/rebase/rebase-412.ebuild diff --git a/app-sci/rebase/ChangeLog b/app-sci/rebase/ChangeLog index bcd496e1fc6f..2a2a5c94fca3 100644 --- a/app-sci/rebase/ChangeLog +++ b/app-sci/rebase/ChangeLog @@ -1,6 +1,12 @@ # ChangeLog for app-sci/rebase # Copyright 2000-2004 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/app-sci/rebase/ChangeLog,v 1.7 2004/11/20 23:38:28 sekretarz Exp $ +# $Header: /var/cvsroot/gentoo-x86/app-sci/rebase/ChangeLog,v 1.8 2004/12/14 00:49:03 ribosome Exp $ + +*rebase-412 (13 Dec 2004) + + 13 Dec 2004; Olivier Fisette rebase-411.ebuild, + +rebase-412.ebuild: + New version: 412. Added 411 to x86. 21 Nov 2004; Karol Wojtaszek rebase-411.ebuild: Keyworded ~amd64, bug #71858 diff --git a/app-sci/rebase/files/digest-rebase-412 b/app-sci/rebase/files/digest-rebase-412 new file mode 100644 index 000000000000..c804b8ca3654 --- /dev/null +++ b/app-sci/rebase/files/digest-rebase-412 @@ -0,0 +1 @@ +MD5 3bedf4f6541926e663dd84dee00c9518 rebase-412.tar.bz2 177515 diff --git a/app-sci/rebase/rebase-411.ebuild b/app-sci/rebase/rebase-411.ebuild index f91213e3d9fb..440a7c0b1f6e 100644 --- a/app-sci/rebase/rebase-411.ebuild +++ b/app-sci/rebase/rebase-411.ebuild @@ -1,6 +1,6 @@ # Copyright 1999-2004 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/app-sci/rebase/rebase-411.ebuild,v 1.2 2004/11/20 23:38:28 sekretarz Exp $ +# $Header: /var/cvsroot/gentoo-x86/app-sci/rebase/rebase-411.ebuild,v 1.3 2004/12/14 00:49:03 ribosome Exp $ DESCRIPTION="A restriction enzyme database" HOMEPAGE="http://${PN}.neb.com" @@ -8,7 +8,7 @@ SRC_URI="mirror://gentoo/${P}.tar.bz2" LICENSE="public-domain" SLOT="0" -KEYWORDS="~x86 ~ppc ~amd64" +KEYWORDS="x86 ~ppc ~amd64" IUSE="no-emboss no-rawdb" src_compile() { diff --git a/app-sci/rebase/rebase-412.ebuild b/app-sci/rebase/rebase-412.ebuild new file mode 100644 index 000000000000..c19103618ef6 --- /dev/null +++ b/app-sci/rebase/rebase-412.ebuild @@ -0,0 +1,35 @@ +# Copyright 1999-2004 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: /var/cvsroot/gentoo-x86/app-sci/rebase/rebase-412.ebuild,v 1.1 2004/12/14 00:49:03 ribosome Exp $ + +DESCRIPTION="A restriction enzyme database" +HOMEPAGE="http://${PN}.neb.com" +SRC_URI="mirror://gentoo/${P}.tar.bz2" +LICENSE="public-domain" + +SLOT="0" +KEYWORDS="~x86 ~ppc ~amd64" +IUSE="no-emboss no-rawdb" + +src_compile() { + # Index the database for use with emboss if emboss is installed and + # the user did not explicitly request not to index the database. + if [ -e /usr/bin/rebaseextract ] && ! use no-emboss; then + einfo "Indexing ${PN} for usage with EMBOSS." + mkdir REBASE + EMBOSS_DATA=. rebaseextract -auto -infile withrefm.${PV} \ + -protofile proto.${PV} || die "Indexing ${PN} failed." + fi +} + +src_install() { + if ! use no-rawdb; then + insinto /usr/share/${PN} + doins withrefm.${PV} proto.${PV} + fi + newdoc REBASE.DOC README + if [ -e /usr/bin/rebaseextract ] && ! use no-emboss; then + insinto /usr/share/EMBOSS/data/REBASE + doins REBASE/{embossre.enz,embossre.ref,embossre.sup} + fi +} -- 2.26.2