From 3502332240c5349643094583df3203c2edcbef21 Mon Sep 17 00:00:00 2001
From: "W. Trevor King" <wking@drexel.edu>
Date: Tue, 23 Feb 2010 14:27:18 -0500
Subject: [PATCH] Added I27 introduction to sec:cantilever

---
 tex/src/cantilever/main.tex  | 16 +++++++++++-----
 tex/src/root.tex             | 27 +++++++++++++++------------
 tex/src/temperature/main.tex |  3 +++
 3 files changed, 29 insertions(+), 17 deletions(-)

diff --git a/tex/src/cantilever/main.tex b/tex/src/cantilever/main.tex
index b8da235..6f13ee1 100644
--- a/tex/src/cantilever/main.tex
+++ b/tex/src/cantilever/main.tex
@@ -1,9 +1,15 @@
 \chapter{Cantilever dependent unfolding experiments}
 \label{sec:cantilever}
 
-TODO...immunoglobulin-like domain 27 from human Titin (I27).  I27 is a
-model protein that has been used in mechanical unfolding experiments
-since the first use of synthetic chains\cite{carrion-vazquez99b,TODO}.
-We use it here because it is both extremly well characterized and
-readily available.
+\section{Methods}
 
+\subparagraph*{}\label{sec:I27}
+The experiments were carried out on octomers of immunoglobulin-like
+domain 27 from human Titin (I27).  I27 is a model protein that has
+been used in mechanical unfolding experiments since the first use of
+synthetic chains\citep{carrion-vazquez99b,TODO}.  We use it here
+because it is both well characterized and readily available (%
+\href{http://www.athenaes.com/}{AthenaES}, Baltimore, MD,
+\href{http://www.athenaes.com/I27OAFMReferenceProtein.php}{0304}).
+
+The I27 octamers were stored in a ... buffer solution.
diff --git a/tex/src/root.tex b/tex/src/root.tex
index a40095a..8a38c68 100644
--- a/tex/src/root.tex
+++ b/tex/src/root.tex
@@ -8,15 +8,18 @@
 % if not, visit
 %   http://creativecommons.org/licenses/by-sa/3.0/legalcode
 
-\documentclass[subfig,%
-               indenttoc,%
-%               final%
-               draft%
-               ]{drexel-thesis}
+\documentclass[%
+  subfig,%
+  indenttoc,%
+%  final%
+  draft%
+]{drexel-thesis}
 % See drexel-thesis.pdf for more options.
 
-%\includeonly{%
-%             }
+\includeonly{%
+  cantilever/main,%
+  temperature/main%
+}
 
 \author{William Trevor King}
 \title{Temperature and cantilever dependent protein unfolding}
@@ -66,11 +69,11 @@ R01-GM071793.
 \end{thesis}
 
 \bibliography{%
-%              unfolding-distributions/main,
-%              sawsim/main,% currently empty
-              cantilever-calib/main,%
-              figures/main,%
-              root}
+%  unfolding-distributions/main,
+%  sawsim/main,% currently empty
+  cantilever-calib/main,%
+  figures/main,%
+  root}
 
 \appendix
 \include{cantilever-calib/main}
diff --git a/tex/src/temperature/main.tex b/tex/src/temperature/main.tex
index 354d00c..62704bb 100644
--- a/tex/src/temperature/main.tex
+++ b/tex/src/temperature/main.tex
@@ -1,2 +1,5 @@
 \chapter{Temperature dependent unfolding experiments}
 \label{sec:temperature}
+
+
+I27 (see page \pageref{sec:I27}), ...
-- 
2.26.2