From 05970723e330bb3ec0fcbc58ef003b6af903f11d Mon Sep 17 00:00:00 2001 From: "W. Trevor King" Date: Sat, 23 Oct 2010 11:37:55 -0400 Subject: [PATCH] Fix some long URLs that had been wrapped by pybtex. --- tex/src/root.bib | 53 ++++++++++++++++-------------------------------- 1 file changed, 17 insertions(+), 36 deletions(-) diff --git a/tex/src/root.bib b/tex/src/root.bib index f7bac1c..2203e0a 100644 --- a/tex/src/root.bib +++ b/tex/src/root.bib @@ -947,8 +947,7 @@ pages = "1236--1241", issn = "0006-291X", doi = "DOI: 10.1016/0006-291X(90)90526-S", - url = "http://www.sciencedirect.com/science/article/B6WBK- - 4F5M7K3-3C/2/c94b612e06efc8534ee24bb1da889811", + url = "http://www.sciencedirect.com/science/article/B6WBK-4F5M7K3-3C/2/c94b612e06efc8534ee24bb1da889811", keywords = "Amino Acid Sequence;Animals;Bacterial Proteins;Binding Sites;Cell Line;Cell Membrane;Cricetinae;Fibronectins;Molecular Sequence Data;Streptavidin", @@ -1322,10 +1321,8 @@ pages = "101--125", issn = "0066-4154", doi = "10.1146/annurev.biochem.77.060706.093102", - eprint = "http://arjournals.annualreviews.org/doi/pdf/10.1146/annurev.bioch - em.77.060706.093102", - url = "http://arjournals.annualreviews.org/doi/abs/10.1146/annurev.biochem. - 77.060706.093102", + eprint = "http://arjournals.annualreviews.org/doi/pdf/10.1146/annurev.biochem.77.060706.093102", + url = "http://arjournals.annualreviews.org/doi/abs/10.1146/annurev.biochem.77.060706.093102", abstract = "Although protein-folding studies began several decades ago, it is only recently that the tools to analyze protein folding at the single-molecule level have been developed. Advances in single-molecule @@ -1608,10 +1605,8 @@ pages = "45--50", issn = "0066-4154", doi = "10.1146/annurev.biochem.012108.120952", - eprint = "http://arjournals.annualreviews.org/doi/pdf/10.1146/annurev.bioch - em.012108.120952", - url = "http://arjournals.annualreviews.org/doi/abs/10.1146/annurev.biochem. - 012108.120952", + eprint = "http://arjournals.annualreviews.org/doi/pdf/10.1146/annurev.biochem.012108.120952", + url = "http://arjournals.annualreviews.org/doi/abs/10.1146/annurev.biochem.012108.120952", abstract = "It has been over one-and-a-half decades since methods of single-molecule detection and manipulation were first introduced in biochemical research. Since then, the application of these methods to @@ -1782,8 +1777,7 @@ number = "1-2", pages = "63--91", issn = "0079-6107", - eprint = "http://www.pubmedcentral.nih.gov/picrender.fcgi?artid=1302160&blo - btype=pdf", + eprint = "http://www.pubmedcentral.nih.gov/picrender.fcgi?artid=1302160&blobtype=pdf", url = "http://www.pubmedcentral.nih.gov/articlerender.fcgi?artid=1302160", keywords = "Elasticity;Hydrogen Bonding;Microscopy, Atomic Force;Protein Denaturation;Protein Engineering;Protein Folding;Recombinant @@ -2411,8 +2405,7 @@ pages = "105--128", issn = "1056-8700", doi = "10.1146/annurev.biophys.30.1.105", - url = "http://arjournals.annualreviews.org/doi/abs/10.1146%2Fannurev.biophy - s.30.1.105", + url = "http://arjournals.annualreviews.org/doi/abs/10.1146%2Fannurev.biophys.30.1.105", keywords = "Biophysics;Kinetics;Microscopy, Atomic Force;Models, Chemical;Protein Binding;Spectrum Analysis;Time Factors", abstract = "On laboratory time scales, the energy landscape of a weak bond @@ -2690,8 +2683,7 @@ pages = "895--901", issn = "0956-5663", doi = "10.1016/0956-5663(95)99227-C", - url = "http://www.sciencedirect.com/science/article/B6TFC- - 3XY2HK9-G/2/6f4e9f67e9a1e14c8bbcc478e5360682", + url = "http://www.sciencedirect.com/science/article/B6TFC-3XY2HK9-G/2/6f4e9f67e9a1e14c8bbcc478e5360682", abstract = "One of the unique features of the atomic force microscope (AFM) is its capacity to measure interactions between tip and sample with high sensitivity and unparal leled spatial resolution. Since the @@ -3396,9 +3388,7 @@ pages = "3212--3237", issn = "1521-3773", doi = "10.1002/1521-3773(20000915)39:18<3212::AID-ANIE3212>3.0.CO;2-X", - eprint = "", - url = "http://dx.doi.org/10.1002/1521-3773(20000915)39:18<3212::AID- - ANIE3212>3.0.CO;2-X", + url = "http://dx.doi.org/10.1002/1521-3773(20000915)39:18<3212::AID-ANIE3212>3.0.CO;2-X", abstract = "How do molecules interact with each other? What happens if a neurotransmitter binds to a ligand-operated ion channel? How do antibodies recognize their antigens? Molecular recognition events play @@ -3487,8 +3477,7 @@ pages = "355--361", issn = "0301-679X", doi = "DOI: 10.1016/j.triboint.2004.08.016", - url = "http://www.sciencedirect.com/science/article/B6V57-4DN9K7J-1/2/fef91 - ac022594c2c6a701376d83ecd31", + url = "http://www.sciencedirect.com/science/article/B6V57-4DN9K7J-1/2/fef91ac022594c2c6a701376d83ecd31", keywords = "AFM;Liquid;Hydrodynamic;Lubrication", abstract = "With the availability of equipment used in Scanning Probe Microscopy (SPM), researchers have been able to probe the local fluid- @@ -3644,8 +3633,7 @@ pages = "159--166", issn = "0141-8130", doi = "10.1016/j.ijbiomac.2009.12.001", - url = "http://www.sciencedirect.com/science/article/B6T7J- - 4XWMND2-1/2/7ef768562b4157fc201d450553e5de5e", + url = "http://www.sciencedirect.com/science/article/B6T7J-4XWMND2-1/2/7ef768562b4157fc201d450553e5de5e", keywords = "Atomic force microscopy;Mechanical unfolding;Monte Carlo simulation;Worm-like chain;Single molecule methods", abstract = "Single molecule methods are becoming routine biophysical @@ -4226,8 +4214,7 @@ pages = "145--151", issn = "0018-9448", doi = "10.1109/18.61115", - url = "http://ieeexplore.ieee.org/xpl/freeabs_all.jsp?isnumber=2227&arnumbe - r=61115&count=35&index=9", + url = "http://ieeexplore.ieee.org/xpl/freeabs_all.jsp?isnumber=2227&arnumber=61115&count=35&index=9", keywords = "divergence;dissimilarity measure;discrimintation information;entropy;probability of error bounds", abstract = "A novel class of information-theoretic divergence measures @@ -4561,8 +4548,7 @@ pages = "453--463", issn = "0887-3585", doi = "10.1002/(SICI)1097-0134(19990601)35:4<453::AID-PROT9>3.0.CO;2-M", - eprint = "http://www3.interscience.wiley.com/cgi- - bin/fulltext/65000328/PDFSTART", + eprint = "http://www3.interscience.wiley.com/cgi-bin/fulltext/65000328/PDFSTART", url = "http://www3.interscience.wiley.com/journal/65000328/abstract", keywords = "Computer Simulation;Fibronectins;Hydrogen Bonding;Microscopy, Atomic Force;Models, Molecular;Protein Denaturation", @@ -4597,8 +4583,7 @@ pages = "9663--9673", publisher = AIP, doi = "10.1063/1.1369622", - eprint = "http://hansmalab.physics.ucsb.edu/pdf/297%20-%20Makarov,%20D.E._J - .Chem.Phys._2001.pdf", + eprint = "http://hansmalab.physics.ucsb.edu/pdf/297%20-%20Makarov,%20D.E._J.Chem.Phys._2001.pdf", url = "http://link.aip.org/link/?JCP/114/9663/1", keywords = "proteins; hydrogen bonds; digital simulation; Monte Carlo methods; molecular biophysics; intramolecular mechanics; @@ -4615,12 +4600,9 @@ number = 26, pages = "8759--8770", issn = "0024-9297", - eprint = "http://pubs.acs.org/cgi- - bin/archive.cgi/mamobx/1995/28/i26/pdf/ma00130a008.pdf", + eprint = "http://pubs.acs.org/cgi-bin/archive.cgi/mamobx/1995/28/i26/pdf/ma00130a008.pdf", url = - "http://pubs3.acs.org/acs/journals/doilookup?in_doi=10.1021/ma00130a008 - ", - abstract = "", + "http://pubs3.acs.org/acs/journals/doilookup?in_doi=10.1021/ma00130a008", note = "Derivation of the Worm-like Chain interpolation function." } @@ -7042,8 +7024,7 @@ pages = "20--22", issn = "0027-8424", eprint = - "http://www.ncbi.nlm.nih.gov/pmc/articles/PMC48166/pdf/pnas01075-0036.p - df", + "http://www.ncbi.nlm.nih.gov/pmc/articles/PMC48166/pdf/pnas01075-0036.pdf", url = "http://www.ncbi.nlm.nih.gov/pmc/articles/PMC48166/", keywords = "Mathematics;Models, Theoretical;Protein Conformation;Proteins", abstract = "Levinthal's paradox is that finding the native folded state of -- 2.26.2