From: W. Trevor King Date: Sun, 13 Sep 2009 15:55:50 +0000 (-0400) Subject: Bumped to version 0.10. X-Git-Tag: v0.10^0 X-Git-Url: http://git.tremily.us/?a=commitdiff_plain;h=e54af54a06738c29d4b7553a57c08dc4d4b6e8da;p=sawsim.git Bumped to version 0.10. --- diff --git a/src/sawsim.nw b/src/sawsim.nw index 90ab17b..86c5fc0 100644 --- a/src/sawsim.nw +++ b/src/sawsim.nw @@ -158,12 +158,18 @@ multi-domain groups. The probability of at least one domain unfolding had been calculated as $P_N=NP_1$, rather than $P_N=1-(1-P_1)^N$. However, for small $P$ the two are equivalent. -Version 0.9 the -P option to sawsim now sets the target probability -for the per-state transition $P_N$, not the per-domain transisiton -$P_1$. +Version 0.9 added the [[-P]] option to sawsim, setting the target +probability for the per-state transition $P_N$, not the per-domain +transisiton $P_1$. + +Version 0.10 added the [[-F]] option to sawsim, setting a limit on the +force change $dF$ in a single timestep for continuous pulling +simulations. It also added the piston tension model (Section +\ref{sec.piston_tension}), and adjusted the stiffness calculations to +handle domains with undefined stiffness. <>= -#define VERSION "0.9" +#define VERSION "0.10" @ \subsection{License}