From: Olivier Fisette <ribosome@gentoo.org>
Date: Thu, 23 Dec 2004 21:38:44 +0000 (+0000)
Subject: Moving to sci-biology/rnaview
X-Git-Url: http://git.tremily.us/?a=commitdiff_plain;h=85e8586ed3399114cedcd0e58c6373518aa89bc9;p=gentoo.git

Moving to sci-biology/rnaview
---

diff --git a/app-sci/rnaview/ChangeLog b/app-sci/rnaview/ChangeLog
deleted file mode 100644
index 66e63bc16cd5..000000000000
--- a/app-sci/rnaview/ChangeLog
+++ /dev/null
@@ -1,10 +0,0 @@
-# ChangeLog for app-sci/rnaview
-# Copyright 1999-2004 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/app-sci/rnaview/ChangeLog,v 1.1 2004/11/07 22:15:27 ribosome Exp $
-
-*rnaview-1 (07 Nov 2004)
-
-  07 Nov 2004; Olivier Fisette <ribosome@gentoo.org> +metadata.xml,
-  +rnaview-1.ebuild:
-  Initial import.
-
diff --git a/app-sci/rnaview/Manifest b/app-sci/rnaview/Manifest
deleted file mode 100644
index 48afa09f0847..000000000000
--- a/app-sci/rnaview/Manifest
+++ /dev/null
@@ -1,4 +0,0 @@
-MD5 874d7ee5673f7b0ad5a4c1a71213a4af rnaview-1.ebuild 923
-MD5 995416f2f5afad50eedb54186ccf50b3 ChangeLog 339
-MD5 683a4745e6be4f5ae83f3250fcad1502 metadata.xml 659
-MD5 df467fedf575ec68666db53ab00bf26b files/digest-rnaview-1 62
diff --git a/app-sci/rnaview/files/digest-rnaview-1 b/app-sci/rnaview/files/digest-rnaview-1
deleted file mode 100644
index b40944ef6e02..000000000000
--- a/app-sci/rnaview/files/digest-rnaview-1
+++ /dev/null
@@ -1 +0,0 @@
-MD5 c83022b5957aef547895300b4217bf36 rnaview-1.tar.bz2 519911
diff --git a/app-sci/rnaview/metadata.xml b/app-sci/rnaview/metadata.xml
deleted file mode 100644
index 8c0ca89678ae..000000000000
--- a/app-sci/rnaview/metadata.xml
+++ /dev/null
@@ -1,17 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
-<pkgmetadata>
-	<maintainer>
-		<email>ribosome@gentoo.org</email>
-		<name>Olivier Fisette</name>
-	</maintainer>
-	<herd>sci</herd>
-	<longdescription>
-		The RNAView program generates 2-dimensional displays of RNA/DNA
-		secondary structures with tertiary interactions. RNAView
-		automatically identifies and classifies the types of base pairs that
-		are formed in nucleic acid structures, fully implementing Leontis and
-		Westhof's (RNA (2001) 7, 499-512), convention for edge-to-edge
-		hydrogen bonding interactions.
-	</longdescription>
-</pkgmetadata>
diff --git a/app-sci/rnaview/rnaview-1.ebuild b/app-sci/rnaview/rnaview-1.ebuild
deleted file mode 100644
index 4748c637bff5..000000000000
--- a/app-sci/rnaview/rnaview-1.ebuild
+++ /dev/null
@@ -1,38 +0,0 @@
-# Copyright 1999-2004 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/app-sci/rnaview/rnaview-1.ebuild,v 1.1 2004/11/07 22:15:27 ribosome Exp $
-
-inherit toolchain-funcs
-
-DESCRIPTION="Generates 2D displays of RNA/DNA secondary structures with tertiary interactions"
-HOMEPAGE="http://beta-ndb.rutgers.edu/services/download/index.html#rnaview"
-SRC_URI="mirror://gentoo/${P}.tar.bz2"
-LICENSE="public-domain"
-
-SLOT="0"
-KEYWORDS="~x86"
-IUSE=""
-
-src_unpack() {
-	unpack ${A}
-	cd ${S}
-	sed -i -e "s/CC        = cc/CC        = $(tc-getCC)/" Makefile
-	sed -i -e "s/CFLAGS  =/CFLAGS  = ${CFLAGS}/" Makefile
-}
-
-src_compile() {
-	make clean
-	make || die
-	cd ${S}/rnaml2ps
-	make clean
-	make || die
-	cd ${S}/test
-	rm '.#t'
-}
-
-src_install() {
-	dobin bin/rnaview rnaml2ps/rnaml2ps
-	dodoc README
-	mkdir -p ${D}/usr/share/${PN}
-	cp -r BASEPARS test ${D}/usr/share/${PN}
-}