From: Matthias Maier Date: Thu, 21 May 2020 16:50:28 +0000 (-0500) Subject: sci-libs/dealii: version bump to 9.2.0, update 9999 X-Git-Url: http://git.tremily.us/?a=commitdiff_plain;h=7cf3ac5ab5ec376ca6c30f408764b32aecbb53b7;p=gentoo.git sci-libs/dealii: version bump to 9.2.0, update 9999 Package-Manager: Portage-2.3.99, Repoman-2.3.22 Signed-off-by: Matthias Maier --- diff --git a/sci-libs/dealii/Manifest b/sci-libs/dealii/Manifest index fa22d9957eeb..c506bf565ca3 100644 --- a/sci-libs/dealii/Manifest +++ b/sci-libs/dealii/Manifest @@ -1,2 +1,4 @@ DIST dealii-9.1.1-offline_documentation.tar.gz 211103151 BLAKE2B ef7cf48aa8019a2d42a38804744ff72cc7f744255fa27df852f8f93c86a02f2125458e0e525e57510bb98adc27aed933fefa27d556d8203c991dae9866c7d57a SHA512 5e2b71e9bdeb80875772356e2c873bc1f065f2a8c5c47923b74b471d464e4867c257e3a47b32341aa60af98e74e3ed2eceba8dedb4b157ab872681576ecbd5db DIST dealii-9.1.1.tar.gz 19911088 BLAKE2B e8488833f11339ccffd4791b9b46ab77f1982cbbdeb11fab7f6b74ca2e17c3d648a2940f4462d0ac9c68bd619b3c4f43b4d8052d2903cbb9cae2fece93d81987 SHA512 02dd91e2b0f395960f900f4cbe00bd307a4762ffbc5f3838dcc34828937e96727efbbcc66fc3d357d6b00b0dddcbc6cd7709c4c03f067d92a8f72d4631b88bf1 +DIST dealii-9.2.0-offline_documentation.tar.gz 277987911 BLAKE2B d14e15bc252f481707b04e9ca3fd05b5469035537a099466a8272fa1d56833c99d845871534df75bbb2efb29063e738700a5a2815b653cdd14b49b3a93add368 SHA512 9680731b4d837561c3682a65391b442cfb8d2a947b0e4e37cad1df83877b371997d084eac52e2bf34b190ea54996d41ddd89bee79fff24d710199417f3f345ab +DIST dealii-9.2.0.tar.gz 24688964 BLAKE2B 60a8ede72a49cb2e658b3d6d53fb332a96f44a7fb9bb499ba54175138d49f38a9b75d9bea2eaddcaa3f50d97ce53961692b35f89578f535d32301680e6f1d68b SHA512 7c76435e45c9c302c4f95f588229f5a9b81f0450bd029729553c706a25dfd16f5c02c50fd2618d7e285d18927b63426110d2c6a074242b91cf789bd4bc77acc5 diff --git a/sci-libs/dealii/dealii-9.2.0.ebuild b/sci-libs/dealii/dealii-9.2.0.ebuild new file mode 100644 index 000000000000..2d31d5890b97 --- /dev/null +++ b/sci-libs/dealii/dealii-9.2.0.ebuild @@ -0,0 +1,164 @@ +# Copyright 1999-2020 Gentoo Authors +# Distributed under the terms of the GNU General Public License v2 + +EAPI=7 + +inherit cmake-utils eutils multilib + +# deal.II uses its own FindLAPACK.cmake file that calls into the system +# FindLAPACK.cmake module and does additional internal setup. Do not remove +# any of these modules: +CMAKE_REMOVE_MODULES_LIST="" + +DESCRIPTION="Solving partial differential equations with the finite element method" +HOMEPAGE="http://www.dealii.org/" + +if [[ ${PV} = *9999* ]]; then + inherit git-r3 + EGIT_REPO_URI="https://github.com/dealii/dealii.git" + SRC_URI="" + KEYWORDS="" +else + MY_PV="${PV//0_rc/rc}" + MY_P="${PN}-${MY_PV}" + SRC_URI="https://github.com/${PN}/${PN}/releases/download/v${MY_PV}/${MY_P}.tar.gz -> ${P}.tar.gz + doc? ( + https://github.com/${PN}/${PN}/releases/download/v${MY_PV}/${MY_P}-offline_documentation.tar.gz + -> ${P}-offline_documentation.tar.gz + )" + KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux" + S="${WORKDIR}/${PN}-${MY_PV}" +fi + +LICENSE="LGPL-2.1+" +SLOT="0" +IUSE=" + adolc assimp arpack cpu_flags_x86_avx cpu_flags_x86_avx512f + cpu_flags_x86_sse2 cuda +debug doc +examples ginkgo gmsh +gsl hdf5 + +lapack metis mpi muparser nanoflann opencascade netcdf p4est petsc + scalapack slepc +sparse static-libs sundials symengine +tbb trilinos +" + +# TODO: add slepc use flag once slepc is packaged for gentoo-science +REQUIRED_USE=" + p4est? ( mpi ) + slepc? ( petsc ) + trilinos? ( mpi )" + +RDEPEND="dev-libs/boost + app-arch/bzip2 + sys-libs/zlib + adolc? ( sci-libs/adolc ) + arpack? ( sci-libs/arpack[mpi=] ) + assimp? ( media-libs/assimp ) + cuda? ( dev-util/nvidia-cuda-sdk ) + ginkgo? ( sci-libs/ginkgo ) + gmsh? ( sci-libs/gmsh ) + gsl? ( sci-libs/gsl ) + hdf5? ( sci-libs/hdf5[mpi=] ) + lapack? ( virtual/lapack ) + metis? ( >=sci-libs/parmetis-4 ) + mpi? ( virtual/mpi ) + muparser? ( dev-cpp/muParser ) + nanoflann? ( sci-libs/nanoflann ) + netcdf? ( sci-libs/netcdf-cxx:0 ) + opencascade? ( sci-libs/opencascade:* ) + p4est? ( sci-libs/p4est[mpi] ) + petsc? ( sci-mathematics/petsc[mpi=] ) + scalapack? ( sci-libs/scalapack ) + slepc? ( sci-mathematics/slepc[mpi=] ) + sparse? ( sci-libs/umfpack ) + sundials? ( =sci-libs/symengine-0.4:= ) + tbb? ( dev-cpp/tbb ) + trilinos? ( sci-libs/trilinos )" + +DEPEND="${RDEPEND} + virtual/pkgconfig + doc? ( app-doc/doxygen[dot] dev-lang/perl )" + +PATCHES=( + "${FILESDIR}"/${PN}-9.1.1-no-ld-flags.patch +) + +src_configure() { + # deal.II needs a custom build type: + local CMAKE_BUILD_TYPE=$(usex debug DebugRelease Release) + + local mycmakeargs=( + -DDEAL_II_PACKAGE_VERSION=9999 + -DCMAKE_INSTALL_RPATH_USE_LINK_PATH=OFF + -DDEAL_II_ALLOW_AUTODETECTION=OFF + -DDEAL_II_ALLOW_BUNDLED=OFF + -DDEAL_II_ALLOW_PLATFORM_INTROSPECTION=OFF + -DDEAL_II_COMPILE_EXAMPLES=OFF + -DDEAL_II_DOCHTML_RELDIR="share/doc/${P}/html" + -DDEAL_II_DOCREADME_RELDIR="share/doc/${P}" + -DDEAL_II_COMPILE_EXAMPLES=OFF + -DDEAL_II_EXAMPLES_RELDIR="share/doc/${P}/examples" + -DDEAL_II_LIBRARY_RELDIR="$(get_libdir)" + -DDEAL_II_SHARE_RELDIR="share/${PN}" + -DDEAL_II_WITH_ZLIB=ON + -DDEAL_II_WITH_ADOLC="$(usex adolc)" + -DDEAL_II_WITH_ASSIMP="$(usex assimp)" + -DDEAL_II_WITH_ARPACK="$(usex arpack)" + -DDEAL_II_WITH_CUDA="$(usex cuda)" + -DDEAL_II_WITH_GINKGO="$(usex ginkgo)" + -DDEAL_II_COMPONENT_DOCUMENTATION="$(usex doc)" + -DDEAL_II_COMPONENT_EXAMPLES="$(usex examples)" + -DDEAL_II_WITH_GMSH="$(usex gmsh)" + -DDEAL_II_WITH_GSL="$(usex gsl)" + -DDEAL_II_WITH_HDF5="$(usex hdf5)" + -DDEAL_II_WITH_LAPACK="$(usex lapack)" + -DDEAL_II_WITH_METIS="$(usex metis)" + -DDEAL_II_WITH_MPI="$(usex mpi)" + -DDEAL_II_WITH_MUPARSER="$(usex muparser)" + -DDEAL_II_WITH_NANOFLANN="$(usex nanoflann)" + -DDEAL_II_WITH_NETCDF="$(usex netcdf)" + -DOPENCASCADE_DIR="${CASROOT}" + -DDEAL_II_WITH_OPENCASCADE="$(usex opencascade)" + -DDEAL_II_WITH_P4EST="$(usex p4est)" + -DDEAL_II_WITH_PETSC="$(usex petsc)" + -DDEAL_II_WITH_SCALAPACK="$(usex scalapack)" + -DDEAL_II_WITH_SLEPC="$(usex slepc)" + -DDEAL_II_WITH_SUNDIALS="$(usex sundials)" + -DDEAL_II_WITH_SYMENGINE="$(usex symengine)" + -DDEAL_II_WITH_UMFPACK="$(usex sparse)" + -DBUILD_SHARED_LIBS="$(usex !static-libs)" + -DDEAL_II_PREFER_STATIC_LIBS="$(usex static-libs)" + -DDEAL_II_WITH_THREADS="$(usex tbb)" + -DDEAL_II_WITH_TRILINOS="$(usex trilinos)" + ) + + # Do a little dance for purely cosmetic "QA" reasons. + use opencascade && mycmakeargs+=( -DOPENCASCADE_DIR="${CASROOT}" ) + + # Do a little dance for purely cosmetic "QA" reasons. The build system + # does query for the highest instruction set first and skips the other + # variables if a "higher" variant is set + if use cpu_flags_x86_avx512f; then + mycmakeargs+=( -DDEAL_II_HAVE_AVX512=yes ) + elif use cpu_flags_x86_avx; then + mycmakeargs+=( -DDEAL_II_HAVE_AVX=yes ) + elif use cpu_flags_x86_avx; then + mycmakeargs+=( -DDEAL_II_HAVE_SSE2=yes ) + fi + + cmake-utils_src_configure +} + +src_install() { + if use doc && [[ ${PV} != *9999* ]]; then + # copy missing images to the build directory: + cp -r "${WORKDIR}"/doc/doxygen/deal.II/images \ + "${BUILD_DIR}"/doc/doxygen/deal.II || die + # replace links: + sed -i \ + 's#"http://www.dealii.org/images/steps/developer/\(step-.*\)"#"images/\1"#g' \ + "${BUILD_DIR}"/doc/doxygen/deal.II/step_*.html || die "sed failed" + fi + cmake-utils_src_install + + # decompress the installed example sources: + use examples && docompress -x /usr/share/doc/${PF}/examples +} diff --git a/sci-libs/dealii/dealii-9999.ebuild b/sci-libs/dealii/dealii-9999.ebuild index 35dcbc94b523..2d31d5890b97 100644 --- a/sci-libs/dealii/dealii-9999.ebuild +++ b/sci-libs/dealii/dealii-9999.ebuild @@ -1,4 +1,4 @@ -# Copyright 1999-2019 Gentoo Authors +# Copyright 1999-2020 Gentoo Authors # Distributed under the terms of the GNU General Public License v2 EAPI=7 @@ -34,9 +34,9 @@ LICENSE="LGPL-2.1+" SLOT="0" IUSE=" adolc assimp arpack cpu_flags_x86_avx cpu_flags_x86_avx512f - cpu_flags_x86_sse2 cuda +debug doc +examples gmsh +gsl hdf5 +lapack - metis mpi muparser nanoflann opencascade netcdf p4est petsc scalapack - slepc +sparse static-libs sundials symengine +tbb trilinos + cpu_flags_x86_sse2 cuda +debug doc +examples ginkgo gmsh +gsl hdf5 + +lapack metis mpi muparser nanoflann opencascade netcdf p4est petsc + scalapack slepc +sparse static-libs sundials symengine +tbb trilinos " # TODO: add slepc use flag once slepc is packaged for gentoo-science @@ -52,6 +52,7 @@ RDEPEND="dev-libs/boost arpack? ( sci-libs/arpack[mpi=] ) assimp? ( media-libs/assimp ) cuda? ( dev-util/nvidia-cuda-sdk ) + ginkgo? ( sci-libs/ginkgo ) gmsh? ( sci-libs/gmsh ) gsl? ( sci-libs/gsl ) hdf5? ( sci-libs/hdf5[mpi=] ) @@ -102,6 +103,7 @@ src_configure() { -DDEAL_II_WITH_ASSIMP="$(usex assimp)" -DDEAL_II_WITH_ARPACK="$(usex arpack)" -DDEAL_II_WITH_CUDA="$(usex cuda)" + -DDEAL_II_WITH_GINKGO="$(usex ginkgo)" -DDEAL_II_COMPONENT_DOCUMENTATION="$(usex doc)" -DDEAL_II_COMPONENT_EXAMPLES="$(usex examples)" -DDEAL_II_WITH_GMSH="$(usex gmsh)" diff --git a/sci-libs/dealii/metadata.xml b/sci-libs/dealii/metadata.xml index 235d8ffe8218..90bacf01225a 100644 --- a/sci-libs/dealii/metadata.xml +++ b/sci-libs/dealii/metadata.xml @@ -36,8 +36,9 @@ and extra output. If you want to get meaningful backtraces see Add threading support with the help of the tbb library (dev-cpp/tbb) Add support for trilinos (sci-libs/trilinos) Add support for assimp (media-libs/assimp) - Add support for cuda assimp (dev-util/nvidia-cuda-sdk) - Add support for sundials assimp (sci-libs/sundials) + Add support for cuda (dev-util/nvidia-cuda-sdk) + Add support for ginkgo (sci-libs/ginkgo) + Add support for sundials (sci-libs/sundials) dealii/dealii