From: Christoph Junghans Date: Fri, 3 Apr 2015 16:55:06 +0000 (+0000) Subject: sci-libs/openmm: removed (bug #536406) X-Git-Url: http://git.tremily.us/?a=commitdiff_plain;h=5cdf63e6bfbf4c01baede7b8cfa77d4672dfae44;p=gentoo.git sci-libs/openmm: removed (bug #536406) --- diff --git a/sci-libs/openmm/ChangeLog b/sci-libs/openmm/ChangeLog deleted file mode 100644 index 92d1930ce61d..000000000000 --- a/sci-libs/openmm/ChangeLog +++ /dev/null @@ -1,74 +0,0 @@ -# ChangeLog for sci-libs/openmm -# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-libs/openmm/ChangeLog,v 1.16 2013/07/07 10:21:20 ago Exp $ - - 07 Jul 2013; Agostino Sarubbo openmm-5.0.1-r2.ebuild: - Stable for x86, wrt bug #472188 - - 28 Jun 2013; Agostino Sarubbo openmm-5.0.1-r2.ebuild: - Stable for amd64, wrt bug #472188 - - 28 Jun 2013; Christoph Junghans openmm-5.0.1-r2.ebuild, - openmm-5.1-r2.ebuild: - fixed install of plugins, too - - 28 Jun 2013; Christoph Junghans openmm-5.0.1-r2.ebuild, - openmm-5.1-r2.ebuild: - fixed a typo - -*openmm-5.1-r2 (27 Jun 2013) -*openmm-5.0.1-r2 (27 Jun 2013) - - 27 Jun 2013; Christoph Junghans +openmm-5.0.1-r2.ebuild, - +openmm-5.1-r2.ebuild, -openmm-5.0.1-r1.ebuild, -openmm-5.1-r1.ebuild: - fixed multilib install (bug #475002) - -*openmm-5.1-r1 (25 Jun 2013) -*openmm-5.0.1-r1 (25 Jun 2013) - - 25 Jun 2013; Christoph Junghans +openmm-5.0.1-r1.ebuild, - +openmm-5.1-r1.ebuild, -openmm-5.0.1.ebuild, -openmm-5.1.ebuild, metadata.xml: - clean up + fix depend (bug #474720) - -*openmm-5.1 (22 May 2013) - - 22 May 2013; Christoph Junghans +openmm-5.1.ebuild: - version bump - - 22 May 2013; Christoph Junghans -openmm-4.1.1-r1.ebuild, - -openmm-5.0.ebuild: - remove old - - 22 May 2013; Christoph Junghans openmm-5.0.1.ebuild: - fix deps (bug #470706) - -*openmm-5.0.1 (10 Mar 2013) - - 10 Mar 2013; Christoph Junghans +openmm-5.0.1.ebuild: - version bump - -*openmm-5.0 (05 Feb 2013) - - 05 Feb 2013; Christoph Junghans +openmm-5.0.ebuild: - version bump - -*openmm-4.1.1-r1 (05 Feb 2013) - - 05 Feb 2013; Christoph Junghans +openmm-4.1.1-r1.ebuild, - -openmm-4.1.1.ebuild, metadata.xml: - clean up install locations - - 08 Jan 2013; Christoph Junghans openmm-4.1.1.ebuild: - removed fetch restriction as license allows redistribution - - 04 Jan 2013; Christoph Junghans openmm-4.1.1.ebuild: - fixed license (thx to ulm) - - 26 Dec 2012; Christoph Junghans openmm-4.1.1.ebuild: - fixed cmake options - -*openmm-4.1.1 (30 Nov 2012) - - 30 Nov 2012; Christoph Junghans +metadata.xml, - +openmm-4.1.1.ebuild: - initial commit diff --git a/sci-libs/openmm/Manifest b/sci-libs/openmm/Manifest deleted file mode 100644 index c5549da66db1..000000000000 --- a/sci-libs/openmm/Manifest +++ /dev/null @@ -1,26 +0,0 @@ ------BEGIN PGP SIGNED MESSAGE----- -Hash: SHA512 - -DIST OpenMM5.0.1-Source.zip 15201507 SHA256 8fe0cc75ec2b7e6edd7f69d64772edb6535e97bec4c2445831716239371b4af4 SHA512 6d480f424fbf18bf150d68ae21fa71cf39399de2183ee80ac73bac41e8486764833346dd173e976f133525abf51f91f47cce4dc6343693a8d489069c2202e316 WHIRLPOOL a3ece2015de51e5296de2c79267aa0527a79b124a1f4998f0093ef06ef848b098791209429b647fd27f137cc7f8e5ba97bdd86dfcaeea540ff0c274bee5be318 -DIST OpenMM5.1-Source.zip 15582536 SHA256 5f011bfbc51f48635384a05ab0e6adeb8a8d0db96a9714a792534547db30bf45 SHA512 90ecfc42d9b4a494cb160f414695cbff200203170353babf9e9bed3d3895a6fda86524e9dac83c6afec0abb440342d3077719c83c2f8bc0866931d0a8b08b0e5 WHIRLPOOL dca8173e460df7351b35712b35dd1b7151f215a9d06de68f0fc27d6cabace2488e32975dbcb03fd54ad0675a6cbc9f162e6a9d383b91598754db5a5cf9973dc6 -EBUILD openmm-5.0.1-r2.ebuild 1898 SHA256 6d778e21130e4a5a892ee33197994651103caf5e5e022c44cb014c9156568e62 SHA512 db915ceaeef85ffc39c1909d41f617cde621576e4db6dc62eb5f8422982cfaccadd8ab5c8dffc1a6680cbf0ec8febe4a981b3a0ed7d7faf517a920942703efb4 WHIRLPOOL 4f4e7bcd676a4483953bbe60e464de0de474baecdfa271bf99214da01382e10ae9bedf374e612b8bebb856ffc27137764dd04622a2e05e051f691843565c0e9a -EBUILD openmm-5.1-r2.ebuild 1901 SHA256 665acf17b9bebeaef3c8be14561cffa93ccfe07aa8cbb24c2cca034adeb8af82 SHA512 164c5decf99922eac03ae9930942d354adf6fc29a7be68070f0c0193f1b877ebd73711ea43138e5f40f17101edb78b2e3d177f496e4f711c5acb2c6823ec8cc3 WHIRLPOOL 5a549b3c19cbcad320f08919cac4ae106f4f93afe44d1f4a2a4582b5ac534df90bd8f13b5f3cff7080dbd0e96db50f05212db38aa3064c5a79d6709621bd2db1 -MISC ChangeLog 2414 SHA256 fe2787e19d052846b0f043a365b508e20cc8aa74ab74cf8f7be7c5a6cd4a430a SHA512 d4745946da785c4f2731022a55b7aaed00bd1159257f9fef460252a79acca7d84ba639e17284fa0d42b5d359199f8d50cc7f892d698af3822cde95c5a6b4b831 WHIRLPOOL 4270c3ec687b40470fef31db6618ddce8a034a04d1bb871a825bee1e664644d5571f62ccf0695847f22a858adf2a7f9680522e279658174ecbeb1affdd762cef -MISC metadata.xml 452 SHA256 902f554cc4cc8394837f3e55cdbfd295d5750bc21f579ed8a96ce9096c89b086 SHA512 a0d896ae48ff7d3e0b32278aa986010410d958a977628200a3aa13643f8429d2e8e13b1a3245578c90411fc1b68ce0e693a9fc4d45b81d94e3e8fbf8d0f2728a WHIRLPOOL b184a0cb2376de47d60e98622480019a09255c000fa3b77b40513e03f53a2274c42ebee5911ffcefd1e5526c248479607b1a992505f8296b0e8fcd512d4d1cfb ------BEGIN PGP SIGNATURE----- -Version: GnuPG v2.0.20 (GNU/Linux) - -iQIcBAEBCgAGBQJR2UEaAAoJELp701BxlEWfYa0QAL7KRiLwO3zNyxrPCRqJ8alr -mbjjy+pPrTMIx54a+1GN64GW2p/PjaqntRLFGxFHk9+5lPDzYeLm94eDjids+5HA -y2jUIOK+E/znDGyzNLhSRosWgHxP70lIp2F8VyuOuzrOAaFexzxVra9O6a3qqXmK -xO69WeRDhfFg5b65zBr+4ysDhJh01RXzANeEMnCP3IrwsQinN6PKyi96tiGwRC1M -DoTfE2A4/bumjNnDzkBlxb/ZohYKwxJJUrqUP+8ZHiz6WjXVP1HqfHHHhqg/hK4y -3E/zAWj+YYnRdfSB1W81sMqKzKvhgIpPlVr2t4kcrq22OurZd7Y/Gf3l5h547ftR -7zorsGjTs7QOxdWiii2o+xSaOnUd0gj2oniUEIbAVLutLzXRpVYG5462EInEqZKo -f35ZSdp9av38tb3Qzs8SPg5SC+wJCQo3dtHB1WSBWB2ISbGTd83t06xgtP0gtjCz -diXsoEwL9W7l7qB7q/pGmzS+rs4p+rt9HwaqhYMFwfsE5KiMRoOhJRd7PbhYy41y -pvPAHcdDm90wtYcWi6I5CJ65QcD4PDe4I7sF+BAv1Oy7N05VkKdj1VmJ+hZWsVst -iOSlFLJCyla4VXUavTMpWKGjITGRhOStVaDmS8hsPsJlww1Z34FAaav3Zn4AFRCO -kFYsYC5ls3PO2PfUCsAd -=h2Wy ------END PGP SIGNATURE----- diff --git a/sci-libs/openmm/metadata.xml b/sci-libs/openmm/metadata.xml deleted file mode 100644 index ed59fda20176..000000000000 --- a/sci-libs/openmm/metadata.xml +++ /dev/null @@ -1,14 +0,0 @@ - - - - sci-chemistry - - ottxor@gentoo.org - Christoph Junghans - - - enable cuda back-end - enable opencl back-end - build wrappers for Python, C and Fortran - - diff --git a/sci-libs/openmm/openmm-5.0.1-r2.ebuild b/sci-libs/openmm/openmm-5.0.1-r2.ebuild deleted file mode 100644 index 5b8d99376bb5..000000000000 --- a/sci-libs/openmm/openmm-5.0.1-r2.ebuild +++ /dev/null @@ -1,76 +0,0 @@ -# Copyright 1999-2013 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-libs/openmm/openmm-5.0.1-r2.ebuild,v 1.5 2013/07/07 10:21:20 ago Exp $ - -EAPI="5" - -PYTHON_COMPAT=( python{2_6,2_7} ) - -inherit cmake-utils cuda multilib python-any-r1 - -MY_P="${PN^^[om]}${PV}-Source" -DESCRIPTION="provides tools for modern molecular modeling simulation" -HOMEPAGE="https://simtk.org/home/openmm" -SRC_URI="mirror://gentoo/${MY_P}.zip" - -LICENSE="MIT LGPL-2.1+ BSD RU-BSD" -SLOT="0" -KEYWORDS="amd64 x86" -IUSE="cuda doc examples opencl wrappers" - -RDEPEND=" - cuda? ( >=dev-util/nvidia-cuda-toolkit-4.2.9-r1 ) - opencl? ( virtual/opencl )" -DEPEND="${RDEPEND} - doc? ( app-doc/doxygen ) - wrappers? ( - dev-cpp/gccxml - virtual/jre - ${PYTHON_DEPS} - app-doc/doxygen )" # wrappers need doxygen #470706 - -S="${WORKDIR}/${MY_P}" - -src_prepare() { - use cuda && cuda_src_prepare - - #475002 - find . -name CMakeLists.txt -exec sed -i \ - -e "/INSTALL/s@\(DESTINATION\|RUNTIME\)\(.*\)lib@\1\2$(get_libdir)@" \ - -e "/INSTALL_TARGETS/s@lib\(.*RUNTIME\)@$(get_libdir)\1@" \ - {} + || die - - default -} - -src_configure() { - mycmakeargs=( - $(cmake-utils_use cuda OPENMM_BUILD_CUDA_LIB) - $(cmake-utils_use opencl OPENMM_BUILD_OPENCL_LIB) - $(cmake-utils_use doc OPENMM_GENERATE_API_DOCS) - $(cmake-utils_use wrappers OPENMM_BUILD_C_AND_FORTRAN_WRAPPERS) - $(cmake-utils_use wrappers OPENMM_BUILD_PYTHON_WRAPPERS) - ) - - cmake-utils_src_configure -} - -src_install() { - cmake-utils_src_install - - if use doc; then - dodoc "${ED}"/usr/docs/*.pdf - dohtml -r "${ED}"/usr/docs/*.html "${ED}"/usr/docs/api-* - fi - rm -f "${ED}"/usr/docs/*.pdf - rm -rf "${ED}"/usr/docs/*.html "${ED}"/usr/docs/api-* - rmdir "${ED}"/usr/docs || die - - if use examples; then - insinto /usr/share/"${PN}" - doins -r "${ED}"/usr/examples - fi - rm -rf "${ED}"/usr/examples - - rm -rf "${ED}"/usr/licenses -} diff --git a/sci-libs/openmm/openmm-5.1-r2.ebuild b/sci-libs/openmm/openmm-5.1-r2.ebuild deleted file mode 100644 index 0eff57d31804..000000000000 --- a/sci-libs/openmm/openmm-5.1-r2.ebuild +++ /dev/null @@ -1,76 +0,0 @@ -# Copyright 1999-2013 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-libs/openmm/openmm-5.1-r2.ebuild,v 1.3 2013/06/28 01:30:51 ottxor Exp $ - -EAPI="5" - -PYTHON_COMPAT=( python{2_6,2_7} ) - -inherit cmake-utils cuda multilib python-any-r1 - -MY_P="${PN^^[om]}${PV}-Source" -DESCRIPTION="provides tools for modern molecular modeling simulation" -HOMEPAGE="https://simtk.org/home/openmm" -SRC_URI="mirror://gentoo/${MY_P}.zip" - -LICENSE="MIT LGPL-2.1+ BSD RU-BSD" -SLOT="0" -KEYWORDS="~amd64 ~x86" -IUSE="cuda doc examples opencl wrappers" - -RDEPEND=" - cuda? ( >=dev-util/nvidia-cuda-toolkit-4.2.9-r1 ) - opencl? ( virtual/opencl )" -DEPEND="${RDEPEND} - doc? ( app-doc/doxygen ) - wrappers? ( - dev-cpp/gccxml - virtual/jre - ${PYTHON_DEPS} - app-doc/doxygen )" # wrappers need doxygen #470706 - -S="${WORKDIR}/${MY_P}" - -src_prepare() { - use cuda && cuda_src_prepare - - #475002 - find . -name CMakeLists.txt -exec sed -i \ - -e "/INSTALL/s@\(DESTINATION\|RUNTIME\)\(.*\)lib@\1\2$(get_libdir)@" \ - -e "/INSTALL_TARGETS/s@lib\(.*RUNTIME\)@$(get_libdir)\1@" \ - {} + || die - - default -} - -src_configure() { - mycmakeargs=( - $(cmake-utils_use cuda OPENMM_BUILD_CUDA_LIB) - $(cmake-utils_use opencl OPENMM_BUILD_OPENCL_LIB) - $(cmake-utils_use doc OPENMM_GENERATE_API_DOCS) - $(cmake-utils_use wrappers OPENMM_BUILD_C_AND_FORTRAN_WRAPPERS) - $(cmake-utils_use wrappers OPENMM_BUILD_PYTHON_WRAPPERS) - ) - - cmake-utils_src_configure -} - -src_install() { - cmake-utils_src_install - - if use doc; then - dodoc "${ED}"/usr/docs/*.pdf - dohtml -r "${ED}"/usr/docs/*.html "${ED}"/usr/docs/api-* - fi - rm -f "${ED}"/usr/docs/*.pdf - rm -rf "${ED}"/usr/docs/*.html "${ED}"/usr/docs/api-* - rmdir "${ED}"/usr/docs || die - - if use examples; then - insinto /usr/share/"${PN}" - doins -r "${ED}"/usr/examples - fi - rm -rf "${ED}"/usr/examples - - rm -rf "${ED}"/usr/licenses -}