From: W. Trevor King <wking@drexel.edu>
Date: Fri, 6 Aug 2010 12:43:16 +0000 (-0400)
Subject: Use cantilever adjusted extension in polymer fitting.
X-Git-Url: http://git.tremily.us/?a=commitdiff_plain;h=4de37de61a70efb07a14d6cd4bd8d3d0f8f17ac0;p=hooke.git

Use cantilever adjusted extension in polymer fitting.
---

diff --git a/hooke/plugin/polymer_fit.py b/hooke/plugin/polymer_fit.py
index d5b43db..9ed2faa 100644
--- a/hooke/plugin/polymer_fit.py
+++ b/hooke/plugin/polymer_fit.py
@@ -973,7 +973,8 @@ Indicies of points bounding the selected data.
         new.info = copy.deepcopy(data.info)
         new[:,:-1] = data
         new.info['columns'].append('%s tension (N)' % model)  # TODO: WLC fit for each peak, etc.
-        z_data = data[:,data.info['columns'].index('surface distance (m)')]
+        z_data = data[:,data.info['columns'].index(
+                'cantilever adjusted extension (m)')]
         d_data = data[:,data.info['columns'].index('deflection (N)')]
         start,stop = params['bounds']
         tension_data,ps = self.fit_polymer_model(