From: Justin Lecher Date: Fri, 26 Dec 2014 13:48:27 +0000 (+0000) Subject: sci-chemistry/dssp: Drop old, fixes #525622 X-Git-Url: http://git.tremily.us/?a=commitdiff_plain;h=4448701c07b1f8c5f697d9382f61ae39fc320f04;p=gentoo.git sci-chemistry/dssp: Drop old, fixes #525622 Package-Manager: portage-2.2.15/cvs/Linux x86_64 Manifest-Sign-Key: 0xB9D4F231BD1558AB! --- diff --git a/sci-chemistry/dssp/ChangeLog b/sci-chemistry/dssp/ChangeLog index d1255c34e0c3..05e7e8cdd3ab 100644 --- a/sci-chemistry/dssp/ChangeLog +++ b/sci-chemistry/dssp/ChangeLog @@ -1,6 +1,10 @@ # ChangeLog for sci-chemistry/dssp # Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/dssp/ChangeLog,v 1.15 2014/12/26 13:16:08 ago Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/dssp/ChangeLog,v 1.16 2014/12/26 13:48:27 jlec Exp $ + + 26 Dec 2014; Justin Lecher -dssp-0.70831.ebuild, + -dssp-2.0.4.ebuild, -dssp-2.1.0.ebuild: + Drop old, fixes #525622 26 Dec 2014; Agostino Sarubbo dssp-2.2.1-r1.ebuild: Stable for x86, wrt bug #525624 diff --git a/sci-chemistry/dssp/Manifest b/sci-chemistry/dssp/Manifest index fc374fcfab41..f2b83146ae03 100644 --- a/sci-chemistry/dssp/Manifest +++ b/sci-chemistry/dssp/Manifest @@ -1,34 +1,30 @@ -----BEGIN PGP SIGNED MESSAGE----- -Hash: SHA256 +Hash: SHA512 AUX Makefile 237 SHA256 4caa74d9736641485b2e977f0b810f692b8afde933d80947da338c56a6f53510 SHA512 36e0434fbc2cdba29b9fcf96b3884649c03800a0b6653b62d2884ea871342afaf690a534e712a6f08375cb50f51a3bdca2cadd0cdc0002c28c92bf379ab28486 WHIRLPOOL c9c2ac927e3bd0c38c29bb92516ca36b92273775f2e8b680d4b9c8b4befe7beb9b29947864ee19145eeb956d381dc6e5893fcc5dfd2504833d5f8a92732f1703 AUX dssp-2.0.4-gcc47.patch 1518 SHA256 869deac0af501fae6588ef2f8223d22af987ad7e7035b61d4d3bf94175221638 SHA512 afaa5ca888b745e482cb4f77345cd00dac14fa8367fa10c95175f9b8a0850ad3a56ccfd1a4ec497a3350929f45c1fc1565218a8bc4d6f8b5e80d7a279c93e8d0 WHIRLPOOL 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SIGNATURE----- diff --git a/sci-chemistry/dssp/dssp-0.70831.ebuild b/sci-chemistry/dssp/dssp-0.70831.ebuild deleted file mode 100644 index a6b60a499234..000000000000 --- a/sci-chemistry/dssp/dssp-0.70831.ebuild +++ /dev/null @@ -1,46 +0,0 @@ -# Copyright 1999-2012 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/dssp/dssp-0.70831.ebuild,v 1.1 2012/06/13 11:01:40 jlec Exp $ - -EAPI="2" - -inherit toolchain-funcs flag-o-matic - -DESCRIPTION="The protein secondary structure standard" -HOMEPAGE="http://swift.cmbi.ru.nl/gv/dssp/" -#SRC_URI="ftp://ftp.cmbi.ru.nl/pub/molbio/software/dsspcmbi.tar.gz" -SRC_URI="${P/./}cmbi.tar.gz" - -LICENSE="free-noncomm" -SLOT="0" -KEYWORDS="amd64 x86 ~amd64-linux ~x86-linux" -IUSE="" -RESTRICT="fetch" - -S="${WORKDIR}"/${PN} - -pkg_nofetch() { - elog "Download ftp://ftp.cmbi.ru.nl/pub/molbio/software/dsspcmbi.tar.gz --" - elog "Rename it to ${A} and place it in ${DISTDIR}" -} - -src_prepare() { - cp "${FILESDIR}"/Makefile . - append-flags -DGCC -} - -src_compile() { - emake CC="$(tc-getCC)" || die -} - -src_install() { - dobin dssp || die - dodoc README.TXT || die - dohtml index.html || die -} - -pkg_postinst() { - elog "Go to ${HOMEPAGE} and return the license agreement." - elog "One of its requirements is citing the article:" - elog "Kabsch, W. & Sander, C. Biopolymers 22:2577-2637 (1983)." -} diff --git a/sci-chemistry/dssp/dssp-2.0.4.ebuild b/sci-chemistry/dssp/dssp-2.0.4.ebuild deleted file mode 100644 index fb11953d227f..000000000000 --- a/sci-chemistry/dssp/dssp-2.0.4.ebuild +++ /dev/null @@ -1,40 +0,0 @@ -# Copyright 1999-2013 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/dssp/dssp-2.0.4.ebuild,v 1.2 2013/03/06 13:59:23 jlec Exp $ - -EAPI=4 - -inherit eutils multilib toolchain-funcs - -DESCRIPTION="The protein secondary structure standard" -HOMEPAGE="http://swift.cmbi.ru.nl/gv/dssp/" -SRC_URI="ftp://ftp.cmbi.ru.nl/pub/molbio/software/dssp-2/${P}.tgz" - -LICENSE="Boost-1.0" -SLOT="0" -KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux" -IUSE="" - -RDEPEND="dev-libs/boost" -DEPEND="${RDEPEND}" - -src_prepare() { - tc-export CXX - - cat >> make.config <<- EOF - BOOST_LIB_SUFFIX = -mt - BOOST_LIB_DIR = "${EPREFIX}/usr/$(get_libdir)" - BOOST_INC_DIR = "${EPREFIX}/usr/include" - EOF - - epatch \ - "${FILESDIR}"/${P}-gcc47.patch \ - "${FILESDIR}"/${P}-gentoo.patch -} - -src_install() { - dobin mkdssp - dosym mkdssp /usr/bin/dssp - doman doc/mkdssp.1 - dodoc README.txt changelog -} diff --git a/sci-chemistry/dssp/dssp-2.1.0.ebuild b/sci-chemistry/dssp/dssp-2.1.0.ebuild deleted file mode 100644 index b375c6dfa3d3..000000000000 --- a/sci-chemistry/dssp/dssp-2.1.0.ebuild +++ /dev/null @@ -1,39 +0,0 @@ -# Copyright 1999-2013 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/dssp/dssp-2.1.0.ebuild,v 1.2 2013/07/09 08:34:28 jlec Exp $ - -EAPI=5 - -inherit eutils multilib toolchain-funcs - -DESCRIPTION="The protein secondary structure standard" -HOMEPAGE="http://swift.cmbi.ru.nl/gv/dssp/" -SRC_URI="ftp://ftp.cmbi.ru.nl/pub/molbio/software/dssp-2/${P}.tgz" - -LICENSE="Boost-1.0" -SLOT="0" -KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux" -IUSE="" - -RDEPEND="dev-libs/boost:=" -DEPEND="${RDEPEND}" - -src_prepare() { - tc-export CXX - - cat >> make.config <<- EOF - BOOST_LIB_SUFFIX = -mt - BOOST_LIB_DIR = "${EPREFIX}/usr/$(get_libdir)" - BOOST_INC_DIR = "${EPREFIX}/usr/include" - EOF - - epatch \ - "${FILESDIR}"/${P}-gentoo.patch -} - -src_install() { - dobin mkdssp - dosym mkdssp /usr/bin/dssp - doman doc/mkdssp.1 - dodoc README.txt changelog -}