From: Justin Lecher Date: Wed, 11 Jan 2012 15:13:19 +0000 (+0000) Subject: Bumped to EAPI=4, dropped old X-Git-Url: http://git.tremily.us/?a=commitdiff_plain;h=41ec55f03101a41a2d4697ef274732d2482e3242;p=gentoo.git Bumped to EAPI=4, dropped old Package-Manager: portage-2.2.0_alpha84/cvs/Linux x86_64 --- diff --git a/sci-chemistry/mustang/ChangeLog b/sci-chemistry/mustang/ChangeLog index 5af71c4ef4d4..46c50c0f624e 100644 --- a/sci-chemistry/mustang/ChangeLog +++ b/sci-chemistry/mustang/ChangeLog @@ -1,6 +1,10 @@ # ChangeLog for sci-chemistry/mustang -# Copyright 1999-2010 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/mustang/ChangeLog,v 1.9 2010/07/07 09:04:29 jlec Exp $ +# Copyright 1999-2012 Gentoo Foundation; Distributed under the GPL v2 +# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/mustang/ChangeLog,v 1.10 2012/01/11 15:13:19 jlec Exp $ + + 11 Jan 2012; Justin Lecher -mustang-3.ebuild, + mustang-3.2.1.ebuild, metadata.xml: + Bumped to EAPI=4, dropped old 07 Jul 2010; Justin Lecher mustang-3.2.1.ebuild: Fixing SRC_URI, #327251 diff --git a/sci-chemistry/mustang/Manifest b/sci-chemistry/mustang/Manifest index e9c62c88a0d1..410ae560f32f 100644 --- a/sci-chemistry/mustang/Manifest +++ b/sci-chemistry/mustang/Manifest @@ -1,17 +1,15 @@ -----BEGIN PGP SIGNED MESSAGE----- -Hash: SHA1 +Hash: SHA512 AUX mustang-3-gcc43.patch 2262 RMD160 d2f9d6de98f679af3b15507b42a410f1e0ba7e08 SHA1 532517644ceaaa0e4263cb04e78f3f47df450592 SHA256 2d9ec5f36d069e51909d56a58003c51bcd409c78946712753d313192c48558b2 -DIST mustang_v.3.tgz 164752 RMD160 e90e55a0cf31955277a68e51f91bc1e00417dacb SHA1 d6e34ecc3094ec1f2c1dbce703a572bf75f406dc SHA256 6d35597930c456d03bb05d644408fd00b1e060d9c8f83353f33b06a42654f552 DIST mustang_v3.2.1.tgz 161216 RMD160 980dd41e24a65f02e77a4b0d60364bbb8423f0d0 SHA1 0a9b55633bfa836d9851be115e2815f8d17839ca SHA256 38f8ec10f15466a42ade770eb6c3ed0ed2449bb070a53b5e8d3125f2596b1556 -EBUILD mustang-3.2.1.ebuild 1148 RMD160 f18af2945416ebf53f3c2db406e19ea6ddebf350 SHA1 2884948f62fc3af5d2f322c7b0960f2095bdd08a SHA256 7c8ee274df8b522fa1921f928c8d3d1b33e26da083664dc20355e7427eefb9dc -EBUILD mustang-3.ebuild 1126 RMD160 e7346977f2dd6b295021c7508b9572cb4438ccea SHA1 b1b0f9443f4d61a3fcb0b2a264769fcf73881421 SHA256 7153751c03d8d4506c37424de8d09c27e36d9a9c1320f44e1531c2244df5a178 -MISC ChangeLog 1320 RMD160 feae8c191730469170837ad55e6ff22f76a8d0c4 SHA1 9b00833705f388d2c5e566be2a4a91e3ac5a2dff SHA256 5cf3a36f355785df4a72ccf4634bd2c43442089a059c5afcd4ced146519b0c20 -MISC metadata.xml 166 RMD160 4452298fd03e7c9395d1182bfe69d60a14144af6 SHA1 cb0b513473c0348f4f6f6cd9a132e4884155fddb SHA256 84c92b49702daf95eace8d2765215cbd8650da4ef776f9f700b5ce3785dec852 +EBUILD mustang-3.2.1.ebuild 1108 RMD160 94ea54cc5fcc711bc93e5508022232fa7d0797a1 SHA1 91d1922637bc36111e423408c87ecff2bf2ce991 SHA256 1621ada39f648e87e2c7e36a447ba32dcd6d2c57b700701a60eb4cb3df5c6dcf +MISC ChangeLog 1458 RMD160 a2e09b7d689ca103bb874e0131bc8471c3b596d8 SHA1 4cf461a8679ed4fdae4ec7cd6dacee4d8729341e SHA256 f5bbd8dbd855ad6cc167677ddf671487a5a6582798c8c17bb32bac616f56bc26 +MISC metadata.xml 167 RMD160 ea4003a55d6e2079381a540c441fc59cde29025a SHA1 3bc6dc4dd68f7de22828138e62aa117387b1765d SHA256 f313eeec4ebffac500b57a98a225e32c77489fc826a50494749b6cdeec28e3e8 -----BEGIN PGP SIGNATURE----- -Version: GnuPG v2.0.15 (GNU/Linux) +Version: GnuPG v2.0.18 (GNU/Linux) -iEYEARECAAYFAkw0QyIACgkQgAnW8HDreRYf6wCeMYXIUX5VaK434InkWgDgaCbo -gVkAoLnXc4yr5k5YccXQAo0WNdE//rgN -=RwC2 +iEYEAREKAAYFAk8NpxQACgkQgAnW8HDreRYvwgCgv5AEUGduS+x7fPxIPf6pF3Tn +XwQAn3m3DQhHvQ5liassbFahnGZVf8dJ +=3rmC -----END PGP SIGNATURE----- diff --git a/sci-chemistry/mustang/metadata.xml b/sci-chemistry/mustang/metadata.xml index 9ac9ffdb3a41..e42d0af60f42 100644 --- a/sci-chemistry/mustang/metadata.xml +++ b/sci-chemistry/mustang/metadata.xml @@ -1,5 +1,5 @@ -sci-chemistry + sci-chemistry diff --git a/sci-chemistry/mustang/mustang-3.2.1.ebuild b/sci-chemistry/mustang/mustang-3.2.1.ebuild index 4e30c5eecfb5..89995aa56775 100644 --- a/sci-chemistry/mustang/mustang-3.2.1.ebuild +++ b/sci-chemistry/mustang/mustang-3.2.1.ebuild @@ -1,8 +1,8 @@ -# Copyright 1999-2010 Gentoo Foundation +# Copyright 1999-2012 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/mustang/mustang-3.2.1.ebuild,v 1.5 2010/07/07 09:04:29 jlec Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/mustang/mustang-3.2.1.ebuild,v 1.6 2012/01/11 15:13:19 jlec Exp $ -EAPI="3" +EAPI=4 inherit base toolchain-funcs @@ -11,8 +11,8 @@ SRC_P="${PN}_v${PV}" MY_P="${MY_PN}_v${PV}" DESCRIPTION="MUltiple STructural AligNment AlGorithm." -HOMEPAGE="http://www.cs.mu.oz.au/~arun/mustang/" -SRC_URI="http://ww2.csse.unimelb.edu.au/~arun/mustang/mustang_v3.2.1.tgz" +HOMEPAGE="http://www.csse.monash.edu.au/~karun/Site/mustang.html" +SRC_URI="http://www.csse.unimelb.edu.au/~arun/${PN}/${SRC_P}.tgz" LICENSE="BSD" SLOT="0" @@ -25,8 +25,7 @@ src_compile() { emake \ CPP=$(tc-getCXX) \ CPPFLAGS="${CXXFLAGS}" \ - LDFLAGS="${LDFLAGS}" \ - || die "emake failed" + LDFLAGS="${LDFLAGS}" } src_test() { @@ -34,9 +33,9 @@ src_test() { } src_install() { - newbin bin/${P} mustang || die - doman man/${PN}.1 || die - dodoc README || die + newbin bin/${P} mustang + doman man/${PN}.1 + dodoc README } pkg_postinst() { diff --git a/sci-chemistry/mustang/mustang-3.ebuild b/sci-chemistry/mustang/mustang-3.ebuild deleted file mode 100644 index 3cc52e09817a..000000000000 --- a/sci-chemistry/mustang/mustang-3.ebuild +++ /dev/null @@ -1,44 +0,0 @@ -# Copyright 1999-2008 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/mustang/mustang-3.ebuild,v 1.4 2008/12/19 20:22:42 loki_val Exp $ - -inherit base toolchain-funcs - -MY_PN="MUSTANG" -SRC_P="${PN}_v.${PV}" -MY_P="${MY_PN}_v.${PV}" -DESCRIPTION="MUltiple STructural AligNment AlGorithm." -HOMEPAGE="http://www.cs.mu.oz.au/~arun/mustang/" -SRC_URI="${HOMEPAGE}${SRC_P}.tgz" -LICENSE="BSD" -SLOT="0" -KEYWORDS="x86 ~amd64" -IUSE="" -RDEPEND="" -DEPEND="${RDEPEND}" -S="${WORKDIR}/${MY_P}" - -PATCHES=( "${FILESDIR}/${P}-gcc43.patch" ) - -src_compile() { - emake \ - CPP=$(tc-getCXX) \ - CPPFLAGS="${CXXFLAGS}" \ - LDFLAGS="${LDFLAGS}" \ - || die "emake failed" -} - -src_test() { - ./bin/MUSTANG_v.${PV} -f ./data/test/test_zf-CCHH -} - -src_install() { - newbin bin/MUSTANG_v.3 mustang - mv mustang mustang.1 -} - -pkg_postinst() { - elog "If you use this program for an academic paper, please cite:" - elog "Arun S. Konagurthu, James C. Whisstock, Peter J. Stuckey, and Arthur M. Lesk" - elog "Proteins: Structure, Function, and Bioinformatics. 64(3):559-574, Aug. 2006" -}