From: Olivier Fisette <ribosome@gentoo.org>
Date: Thu, 23 Dec 2004 15:28:29 +0000 (+0000)
Subject: Moved from app-sci/qrna to sci-biology/qrna.
X-Git-Url: http://git.tremily.us/?a=commitdiff_plain;h=2723757944a224d9b63162207894e4acc93c95eb;p=gentoo.git

Moved from app-sci/qrna to sci-biology/qrna.
---

diff --git a/sci-biology/qrna/ChangeLog b/sci-biology/qrna/ChangeLog
new file mode 100644
index 000000000000..32f1f0f5355c
--- /dev/null
+++ b/sci-biology/qrna/ChangeLog
@@ -0,0 +1,27 @@
+# ChangeLog for app-sci/qrna
+# Copyright 2000-2004 Gentoo Foundation; Distributed under the GPL v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/qrna/ChangeLog,v 1.1 2004/12/23 15:28:29 ribosome Exp $
+
+*qrna-2.0.2c (23 Dec 2004)
+
+  23 Dec 2004; Olivier Fisette <olivier@gentoo.org> +metadata.xml,
+  +files/26qrna, +qrna-2.0.2c.ebuild:
+  Moved from app-sci/qrna to sci-biology/qrna.
+
+  22 Nov 2004; Olivier Fisette <ribosome@gentoo.org> :
+  Jason Huebel <jhuebel@gentoo.org> added qrna-2.0.2c to ~amd64.
+
+  31 Oct 2004; Olivier Fisette <ribosome@gentoo.org> qrna-2.0.2c.ebuild:
+  Added to x86.
+
+  23 Jul 2004; Jon Hood <squinky86@gentoo.org> qrna-2.0.2c.ebuild:
+  Change virtual/glibc -> virtual/libc.
+
+  21 Jul 2004; David Holm <dholm@gentoo.org> qrna-2.0.2c.ebuild:
+  Added to ~ppc.
+
+*qrna-2.0.2c (20 Jul 2004)
+
+  20 Jul 2004; Olivier Fisette <ribosome@gentoo.org>
+  qrna-2.0.2c.ebuild, metadata.xml, ChangeLog:
+  Initial import.
diff --git a/sci-biology/qrna/Manifest b/sci-biology/qrna/Manifest
new file mode 100644
index 000000000000..204405420e32
--- /dev/null
+++ b/sci-biology/qrna/Manifest
@@ -0,0 +1,5 @@
+MD5 b94191072e63a3e47c5ba416f3f72262 qrna-2.0.2c.ebuild 892
+MD5 bef5cd8ce639500ef42ff55452ea2bb9 ChangeLog 747
+MD5 f189a3c4ff5ae55bcee4f8ed0ace5d20 metadata.xml 254
+MD5 9127b0a4628230fc3bf2e201ca7519a9 files/26qrna 30
+MD5 23a5277d2c657c4624bc93b197c51020 files/digest-qrna-2.0.2c 57
diff --git a/sci-biology/qrna/files/26qrna b/sci-biology/qrna/files/26qrna
new file mode 100644
index 000000000000..53a90b90ed78
--- /dev/null
+++ b/sci-biology/qrna/files/26qrna
@@ -0,0 +1 @@
+QRNADB="/usr/share/qrna/data"
diff --git a/sci-biology/qrna/files/digest-qrna-2.0.2c b/sci-biology/qrna/files/digest-qrna-2.0.2c
new file mode 100644
index 000000000000..7c2bd227c4a0
--- /dev/null
+++ b/sci-biology/qrna/files/digest-qrna-2.0.2c
@@ -0,0 +1 @@
+MD5 910590603c4c0f1153930d3ad4d05a85 qrna.tar.Z 14045716
diff --git a/sci-biology/qrna/metadata.xml b/sci-biology/qrna/metadata.xml
new file mode 100644
index 000000000000..e9391a41a838
--- /dev/null
+++ b/sci-biology/qrna/metadata.xml
@@ -0,0 +1,9 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<pkgmetadata>
+	<maintainer>
+		<email>ribosome@gentoo.org</email>
+		<name>Olivier Fisette</name>
+	</maintainer>
+	<herd>sci</herd>
+</pkgmetadata>
diff --git a/sci-biology/qrna/qrna-2.0.2c.ebuild b/sci-biology/qrna/qrna-2.0.2c.ebuild
new file mode 100644
index 000000000000..5cb56586819f
--- /dev/null
+++ b/sci-biology/qrna/qrna-2.0.2c.ebuild
@@ -0,0 +1,40 @@
+# Copyright 1999-2004 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/qrna/qrna-2.0.2c.ebuild,v 1.1 2004/12/23 15:28:29 ribosome Exp $
+
+DESCRIPTION="Prototype ncRNA genefinder"
+HOMEPAGE="http://www.genetics.wustl.edu/eddy/software/"
+SRC_URI="ftp://ftp.genetics.wustl.edu/pub/eddy/software/qrna.tar.Z"
+LICENSE="GPL-2"
+
+SLOT="0"
+KEYWORDS="x86 ~ppc ~amd64"
+IUSE="perl"
+
+DEPEND="perl? ( dev-lang/perl )
+	virtual/libc"
+
+src_compile () {
+	cd ${S}/squid
+	emake || die
+	cd ${S}/src
+	emake || die
+}
+
+src_install () {
+	dobin src/qrna
+	use perl && dobin scripts/*
+
+	newdoc 00README README
+	insinto /usr/share/doc/${PF}
+	doins documentation/*
+
+	insinto /usr/share/${PN}/data
+	doins lib/*
+	insinto /usr/share/${PN}/demos
+	doins Demos/*
+
+	# Sets the path to the QRNA data files.
+	insinto /etc/env.d
+	doins ${FILESDIR}/26qrna
+}