From: Michał Górny <mgorny@gentoo.org>
Date: Sun, 15 Dec 2019 20:20:37 +0000 (+0100)
Subject: sci-biology/gatk: Drop broken -9999
X-Git-Url: http://git.tremily.us/?a=commitdiff_plain;h=1f2569486e5080071fbcf33caa048c6fdd3a1747;p=gentoo.git

sci-biology/gatk: Drop broken -9999

Signed-off-by: Michał Górny <mgorny@gentoo.org>
---

diff --git a/sci-biology/gatk/gatk-9999.ebuild b/sci-biology/gatk/gatk-9999.ebuild
deleted file mode 100644
index fee2670ad219..000000000000
--- a/sci-biology/gatk/gatk-9999.ebuild
+++ /dev/null
@@ -1,40 +0,0 @@
-# Copyright 1999-2013 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=5
-
-EANT_BUILD_TARGET="dist"
-EANT_NEEDS_TOOLS="true"
-JAVA_ANT_REWRITE_CLASSPATH="true"
-
-inherit git-2 java-pkg-2 java-ant-2
-
-DESCRIPTION="The Genome Analysis Toolkit"
-HOMEPAGE="http://www.broadinstitute.org/gsa/wiki/index.php/The_Genome_Analysis_Toolkit"
-SRC_URI=""
-EGIT_REPO_URI="https://github.com/broadgsa/gatk.git"
-
-LICENSE="MIT"
-SLOT="0"
-IUSE=""
-KEYWORDS=""
-
-COMMON_DEPS=""
-DEPEND="
-	>=virtual/jdk-1.6
-	dev-vcs/git
-	${COMMON_DEPS}"
-RDEPEND="
-	>=virtual/jre-1.6
-	${COMMON_DEPS}"
-
-src_prepare() {
-	sed -i '/property name="ivy.home"/ s|${user.home}|'${WORKDIR}'|' build.xml || die
-	java-pkg-2_src_prepare
-}
-
-src_install() {
-	java-pkg_dojar dist/*.jar
-	java-pkg_dolauncher GenomeAnalysisTK --jar GenomeAnalysisTK.jar
-	java-pkg_dolauncher AnalyzeCovariates --jar AnalyzeCovariates.jar
-}