From: W. Trevor King <wking@drexel.edu>
Date: Thu, 3 Jun 2010 14:07:11 +0000 (-0400)
Subject: Flip deflection sign in picoforce driver so +deflection for +tension
X-Git-Url: http://git.tremily.us/?a=commitdiff_plain;h=1784c60782f2a15dc9a19c1355bf763680c533fd;p=hooke.git

Flip deflection sign in picoforce driver so +deflection for +tension
---

diff --git a/hooke/driver/picoforce.py b/hooke/driver/picoforce.py
index c1139d6..178574e 100644
--- a/hooke/driver/picoforce.py
+++ b/hooke/driver/picoforce.py
@@ -343,7 +343,11 @@ class PicoForceDriver (Driver):
             * info['z piezo sensitivity (m/V)']
             )
 
-        ret[:,d_col] = (
+        # Leading '-' because deflection voltage increases as the tip
+        # moves away from the surface, but it makes more sense to me
+        # to have it increase as it moves toward the surface (positive
+        # tension on the protein chain).
+        ret[:,d_col] = -(
             (data[:,d_col]
              * info['deflection sensitivity (V/bit)']
              - info['deflection offset (V)'])