From: Justin Lecher Date: Thu, 8 Apr 2010 18:47:57 +0000 (+0000) Subject: pymol-plugins-ezviz removed from tree X-Git-Url: http://git.tremily.us/?a=commitdiff_plain;h=0640da1cb4359c705164344ca517c736fd8d0872;p=gentoo.git pymol-plugins-ezviz removed from tree --- diff --git a/sci-chemistry/pymol-plugins-ezviz/ChangeLog b/sci-chemistry/pymol-plugins-ezviz/ChangeLog deleted file mode 100644 index 8f4cb05944ba..000000000000 --- a/sci-chemistry/pymol-plugins-ezviz/ChangeLog +++ /dev/null @@ -1,10 +0,0 @@ -# ChangeLog for sci-chemistry/pymol-plugins-ezviz -# Copyright 1999-2010 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/pymol-plugins-ezviz/ChangeLog,v 1.1 2010/03/27 08:49:17 jlec Exp $ - -*pymol-plugins-ezviz-1.0.2005 (27 Mar 2010) - - 27 Mar 2010; Justin Lecher (jlec) - +pymol-plugins-ezviz-1.0.2005.ebuild, +files/gentoo.patch, +metadata.xml: - New Ebuild requested per 309737 - diff --git a/sci-chemistry/pymol-plugins-ezviz/Manifest b/sci-chemistry/pymol-plugins-ezviz/Manifest deleted file mode 100644 index 5f1d3b3581f4..000000000000 --- a/sci-chemistry/pymol-plugins-ezviz/Manifest +++ /dev/null @@ -1,15 +0,0 @@ ------BEGIN PGP SIGNED MESSAGE----- -Hash: SHA1 - -AUX gentoo.patch 4616 RMD160 d74f901b5e6b7844b92d93d93ce1ad4ee3950536 SHA1 8a96fabf2fb8b15c24b27bcba4382a10b769657c SHA256 3e96d68e75f3f6d75bc824daab2d025e58c6184809eb307d802bfbdb53341494 -DIST pymol-plugins-ezviz-1.0.2005.zip 137431 RMD160 1f36f033d5020acccc6b4f7612a934b004fe95f9 SHA1 7ac2ee87a6d25c5a5b8b55b8e88c2cf624a6c54a SHA256 742c18d338ccc0567203c122a5f7ce0f903bf3247f7620337828d9dd5ae4f008 -EBUILD pymol-plugins-ezviz-1.0.2005.ebuild 1372 RMD160 2dd7fcbf1742972e3e2903ff8e4302927fc8c953 SHA1 2fefa31555bd8d35e5b7b4fb51fcaf728bdf312b SHA256 643bb009d4d7cfaba9a05fa8ee8db5209ac2f977476d445d889214b2d4a2c40f -MISC ChangeLog 447 RMD160 f3abcddf29c6187756262a71994f6244e58a7d8d SHA1 646b397be16bf78c13efe89141081470864bf693 SHA256 7343f2099f25e2440cda010871861eec0f19f1efbe4ca071c335276a6535f2d7 -MISC metadata.xml 734 RMD160 eab17443806462e202717773dfc67e69cd542e6e SHA1 f27a731f0f4915847c3cf13d43fd850f01816332 SHA256 6119764c7548a12529bd04d76aa119c4cefa59d61ec4954ae6e895a564f257ae ------BEGIN PGP SIGNATURE----- -Version: GnuPG v2.0.14 (GNU/Linux) - -iEYEARECAAYFAkutxpQACgkQgAnW8HDreRYlvQCfTz6Zz6omI1MW7+3B9viAy8Yi -KZ8AoJmbUuMFuQ8vLUpHFS+5RZuxnm2k -=ojpN ------END PGP SIGNATURE----- diff --git a/sci-chemistry/pymol-plugins-ezviz/files/gentoo.patch b/sci-chemistry/pymol-plugins-ezviz/files/gentoo.patch deleted file mode 100644 index ba28af325c21..000000000000 --- a/sci-chemistry/pymol-plugins-ezviz/files/gentoo.patch +++ /dev/null @@ -1,85 +0,0 @@ -diff --git a/ez-viz.py b/ez-viz.py -index 1d8e847..8d50e6b 100755 ---- a/ez-viz.py -+++ b/ez-viz.py -@@ -363,27 +363,27 @@ class PGUI: - global splash - - # Images used in Presets tab -- defaultImage = PhotoImage( file="modules\pmg_tk\startup\default.gif") -- chains = PhotoImage(file="modules\pmg_tk\startup\chains.GIF") -- heteroImg = PhotoImage(file="modules\pmg_tk\startup\heteroAtom.GIF") -- ballStickImg = PhotoImage(file="C:\Program Files\DeLano Scientific\PyMOL\modules\pmg_tk\startup\showBallStick.GIF") -- surfaceImg = PhotoImage(file="modules\pmg_tk\startup\surface.GIF") -- polarityImg = PhotoImage(file="modules\pmg_tk\startup\polarity.GIF") -- puttyImg = PhotoImage(file="modules\pmg_tk\startup\putty.GIF") -- aromaticsImg = PhotoImage(file="modules\pmg_tk\startup\showAromatics.GIF") -- dnaImg = PhotoImage(file="modules\pmg_tk\startup\dna.GIF") -+ defaultImage = PhotoImage( file="GENTOOPYMOL/pmg_tk/startup/ez-viz/default.gif") -+ chains = PhotoImage(file="GENTOOPYMOL/pmg_tk/startup/ez-viz/chains.gif") -+ heteroImg = PhotoImage(file="GENTOOPYMOL/pmg_tk/startup/ez-viz/heteroAtom.gif") -+ ballStickImg = PhotoImage(file="GENTOOPYMOL/pmg_tk/startup/ez-viz/showBallStick.gif") -+ surfaceImg = PhotoImage(file="GENTOOPYMOL/pmg_tk/startup/ez-viz/surface.gif") -+ polarityImg = PhotoImage(file="GENTOOPYMOL/pmg_tk/startup/ez-viz/polarity.gif") -+ puttyImg = PhotoImage(file="GENTOOPYMOL/pmg_tk/startup/ez-viz/putty.gif") -+ aromaticsImg = PhotoImage(file="GENTOOPYMOL/pmg_tk/startup/ez-viz/showAromatics.gif") -+ dnaImg = PhotoImage(file="GENTOOPYMOL/pmg_tk/startup/ez-viz/dna.gif") - - # Movie tab images -- ligand = PhotoImage(file="modules\pmg_tk\startup\zoom.GIF") -- build = PhotoImage(file="modules\pmg_tk\startup\prot.GIF") -- chainsMovieImg = PhotoImage(file="modules\pmg_tk\startup\chainsMovie.GIF") -- rotateImg = PhotoImage(file="modules\pmg_tk\startup\Rotate.GIF") -- playButton = PhotoImage(file="modules\pmg_tk\startup\play.GIF") -- stopButton = PhotoImage(file="modules\pmg_tk\startup\stop.GIF") -- rewindButton = PhotoImage(file="modules\pmg_tk\startup\Rewind.GIF") -+ ligand = PhotoImage(file="GENTOOPYMOL/pmg_tk/startup/ez-viz/zoom.gif") -+ build = PhotoImage(file="GENTOOPYMOL/pmg_tk/startup/ez-viz/prot.gif") -+ chainsMovieImg = PhotoImage(file="GENTOOPYMOL/pmg_tk/startup/ez-viz/chainsMovie.gif") -+ rotateImg = PhotoImage(file="GENTOOPYMOL/pmg_tk/startup/ez-viz/Rotate.gif") -+ playButton = PhotoImage(file="GENTOOPYMOL/pmg_tk/startup/ez-viz/play.gif") -+ stopButton = PhotoImage(file="GENTOOPYMOL/pmg_tk/startup/ez-viz/stop.gif") -+ rewindButton = PhotoImage(file="GENTOOPYMOL/pmg_tk/startup/ez-viz/Rewind.gif") - - # Welcome tab image -- splash = PhotoImage(file="modules\pmg_tk\startup\splash.GIF") -+ splash = PhotoImage(file="GENTOOPYMOL/pmg_tk/startup/ez-viz/splash.gif") - #--------------------------------------# - # # - # PRESETS METHODS # -@@ -1035,7 +1035,7 @@ class PGUI: - if tkMessageBox.askyesno('Ray Trace Image', "Do you want to ray trace you image before saving it? Depending on your image "+ - "this make take a few minutes if you select yes."): - cmd.ray() -- file = tkFileDialog.asksaveasfilename(defaultextension=".png", initialdir="C:/Program Files/DeLano Scientific/PyMOL/") -+ file = tkFileDialog.asksaveasfilename(defaultextension=".png", initialdir="./") - if len(file)>0: - cmd.save(file) - -@@ -1045,7 +1045,7 @@ class PGUI: - import tkFileDialog - import tkMessageBox - -- file = tkFileDialog.asksaveasfilename(defaultextension=".pse", initialdir='C:/Program Files/Delano Scientific/PyMOL/') -+ file = tkFileDialog.asksaveasfilename(defaultextension=".pse", initialdir='./') - print file - if len(file)>0: - cmd.save(file) -@@ -1574,7 +1574,7 @@ class PGUI: - #------Open Help File---------# - def help(self): - import webbrowser -- webbrowser.open('modules\pmg_tk\startup\Help\EZ-VizWebMain.html') -+ webbrowser.open('GENTOOPYMOL/pmg_tk/startup/ez-vizHelp\EZ-VizWebMain.html') - - #---------------------------------------------------------------# - # # -@@ -2188,7 +2188,7 @@ class PGUI: - import tkFileDialog - - if result == 'Open': -- file=tkFileDialog.askopenfilename(initialdir='C:/Documents and Settings/Administrator/My Documents/') -+ file=tkFileDialog.askopenfilename(initialdir='./') - if file: - cmd.load(file) - self.pdbCode = file diff --git a/sci-chemistry/pymol-plugins-ezviz/metadata.xml b/sci-chemistry/pymol-plugins-ezviz/metadata.xml deleted file mode 100644 index bfccced9410e..000000000000 --- a/sci-chemistry/pymol-plugins-ezviz/metadata.xml +++ /dev/null @@ -1,18 +0,0 @@ - - -sci-chemistry - - jlec@gentoo.org - - - EZ-Viz was developed as an assistance tool for the difficult to - understand user interface of PyMOL. The standard interface is - very complex takes a long time to learn, especially for students - unfamiliar with the chemistry and busy researchers with little - time to learn the commands necessary to use the PyMOL software - to its full extent. EZ-Viz allows for users to navigate through - PyMOL using a series of clickable buttons and tabs to complete - all functions of the PyMol software without ever having to type - a single command. - - diff --git a/sci-chemistry/pymol-plugins-ezviz/pymol-plugins-ezviz-1.0.2005.ebuild b/sci-chemistry/pymol-plugins-ezviz/pymol-plugins-ezviz-1.0.2005.ebuild deleted file mode 100644 index eecaef8837f7..000000000000 --- a/sci-chemistry/pymol-plugins-ezviz/pymol-plugins-ezviz-1.0.2005.ebuild +++ /dev/null @@ -1,63 +0,0 @@ -# Copyright 1999-2010 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/pymol-plugins-ezviz/pymol-plugins-ezviz-1.0.2005.ebuild,v 1.1 2010/03/27 08:49:17 jlec Exp $ - -EAPI="3" - -SUPPORT_PYTHON_ABIS="1" - -inherit eutils python - -DESCRIPTION="assistance tool for the difficult to understand user interface of PyMOL" -HOMEPAGE="http://www.rit.edu/cos/ezviz/index.html" -SRC_URI=" - mirror://gentoo/${P}.zip - mirror://gentoo/${P}.zip" - -SLOT="0" -KEYWORDS="~amd64 ~x86" -LICENSE="as-is" -IUSE="doc" - -RDEPEND="sci-chemistry/pymol" -DEPEND=" - app-arch/unzip - ${RDEPEND}" - -RESTRICT_PYTHON_ABIS="3.*" - -S="${WORKDIR}/EZ_Viz Folder" - -src_prepare() { - edos2unix ez-viz.py - python_copy_sources - preperation() { - epatch "${FILESDIR}"/gentoo.patch - sed \ - -e "s:GENTOOPYMOL:${EPREFIX}/$(python_get_sitedir):g" \ - -i ez-viz.py || die - } - python_execute_function -s preperation -} - -src_install() { - installation() { - insinto $(python_get_sitedir)/pmg_tk/startup/ - doins *.py || die - insinto $(python_get_sitedir)/pmg_tk/startup/ez-viz/ - doins *.gif || die - for gif in *.GIF; do - newins ${gif} ${gif/.GIF/.gif} || die - done - } - python_execute_function -s installation - dodoc readme.txt || die -} - -pkg_postinst() { - python_mod_optimize pmg_tk/startup -} - -pkg_postrm() { - python_mod_cleanup pmg_tk/startup -}