From: W. Trevor King Date: Sat, 16 Apr 2011 01:39:21 +0000 (-0400) Subject: Remove space between function name and '(' in entrez.py. X-Git-Url: http://git.tremily.us/?a=commitdiff_plain;h=051d887e4674db26558870555cde720f92fcb851;p=blog.git Remove space between function name and '(' in entrez.py. --- diff --git a/posts/entrez/entrez.py b/posts/entrez/entrez.py index 60ae214..61948b2 100755 --- a/posts/entrez/entrez.py +++ b/posts/entrez/entrez.py @@ -205,13 +205,13 @@ def _query_einfo(db=None): Either list all available databases with db=None, or Specific information on a particular database (e.g. pubmed) with db=pubmed. """ - params = urlencode ({ + params = urlencode({ 'db': db, 'tool': TOOL, 'email': EMAIL}) LOG.info("getting einfo from '%s?%s'" % (EINFO_URL, params)) - f = urllib.urlopen ("%s?%s" % (EINFO_URL, params)) + f = urllib.urlopen("%s?%s" % (EINFO_URL, params)) string = f.read() f.close() LOG.debug('got:\n%s' % string) @@ -404,7 +404,7 @@ def _query_esearch(term, db='pubmed', field=None, if field != None: validate_field(field) validate_search_term(term, valid_fields) - params = urlencode ({ + params = urlencode({ 'tool': TOOL, 'email': EMAIL, 'term': term, @@ -420,7 +420,7 @@ def _query_esearch(term, db='pubmed', field=None, 'sort': sort}) LOG.info("getting esearch from '%s?%s'" % (ESEARCH_URL, params)) - f = urllib.urlopen ("%s?%s" % (ESEARCH_URL, params)) + f = urllib.urlopen("%s?%s" % (ESEARCH_URL, params)) string = f.read() f.close() LOG.debug('got:\n%s' % string) @@ -502,7 +502,7 @@ def _query_efetch(id, db='pubmed', for d in id: idstring += "%s," % d idstring = idstring[:-1] # remove trailing comma - params = urlencode ({ + params = urlencode({ 'tool': TOOL, 'email': EMAIL, 'id': idstring, @@ -512,7 +512,7 @@ def _query_efetch(id, db='pubmed', 'rettype': rettype}) LOG.info("getting efetch from '%s?%s'" % (EFETCH_URL, params)) - f = urllib.urlopen ("%s?%s" % (EFETCH_URL, params)) + f = urllib.urlopen("%s?%s" % (EFETCH_URL, params)) string = f.read() f.close() LOG.debug('got:\n%s' % string) @@ -602,7 +602,7 @@ def _query_elink(id, term=None, db='all', dbfrom='pubmed', idstring += "%s," % d idstring = idstring[:-1] # remove trailing comma - params = urlencode ({ + params = urlencode({ 'tool': TOOL, 'email': EMAIL, 'id': idstring, @@ -619,7 +619,7 @@ def _query_elink(id, term=None, db='all', dbfrom='pubmed', 'retmode': retmode}) LOG.info("getting elink from '%s?%s'" % (ELINK_URL, params)) - f = urllib.urlopen ("%s?%s" % (ELINK_URL, params)) + f = urllib.urlopen("%s?%s" % (ELINK_URL, params)) if cmd == 'prlinks' and retmode == 'ref': # Just get the link, we don't need the provider's webpage HTML.