Moving to sci-biology/phylip

diff --git a/app-sci/phylip/ChangeLog b/app-sci/phylip/ChangeLog
deleted file mode 100644 (file)
index 857995b..0000000
--- a/app-sci/phylip/ChangeLog
+++ /dev/null
@@ -1,44 +0,0 @@
-# ChangeLog for app-sci/phylip
-# Copyright 2000-2004 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/app-sci/phylip/ChangeLog,v 1.10 2004/12/19 22:43:37 ribosome Exp $
-
-*phylip-3.63 (19 Dec 2004)
-
-  19 Dec 2004; Olivier Fisette <ribosome@gentoo.org> +phylip-3.63.ebuild:
-  New version.
-
-  2 Nov 2004; Lina Pezzella <j4rg0n@gentoo.org> -phylip-3.62.ebuild:
-  Keyworded ~ppc-macos.
-  
-  14 Oct 2004; Olivier Fisette <ribosome@gentoo.org> -phylip-3.61.ebuild,
-  phylip-3.62.ebuild:
-  Added 3.62 to x86. Removed old version. Use gcc.eclass rather than ${CC}.
-
-*phylip-3.62 (29 Sep 2004)
-
-  29 Sep 2004; Olivier Fisette <ribosome@gentoo.org> -phylip-3.5.ebuild,
-  -phylip-3.6.ebuild, phylip-3.61.ebuild, +phylip-3.62.ebuild:
-  Added 3.61 to x86. New version 3.62. Removed old versions.
-
-*phylip-3.61.ebuild (7 Aug 2004)
-
-  7 Aug 2004; Olivier Fisette <ribosome@gentoo.org> phylip-3.61.ebuild:
-  Version bump. The program icons are no longer part of the distribution.
-
-  23 Jul 2004; Jon Hood <squinky86@gentoo.org> phylip-3.6.ebuild:
-  Change virtual/glibc -> virtual/libc.
-
-  21 Jul 2004; David Holm <dholm@gentoo.org> phylip-3.6.ebuild:
-  Added to ~ppc.
-
-*phylip-3.6.ebuild (19 Jul 2004)
-
-  19 Jul 2004; Olivier Fisette <ribosome@gentoo.org> phylip-3.6.ebuild:
-  New version and a modified ebuild. Update suggested by Pablo Nehab-Hess
-  <natunobilis@gentoobr.org> (#38853).
-
-*phylip-3.5 (23 Apr 2003)
-
-  23 Apr 2003; Jon Portnoy <avenj@gentoo.org> phylip-3.5.ebuild :
-  Initial import. Ebuild submitted in bug #19856 by Stephen Diener
-  (sediener@unity.ncsu.edu).

diff --git a/app-sci/phylip/Manifest b/app-sci/phylip/Manifest
deleted file mode 100644 (file)
index d66e0a4..0000000
--- a/app-sci/phylip/Manifest
+++ /dev/null
@@ -1,6 +0,0 @@
-MD5 5aeacc04d3af37951adf6ad6f4d46c5d phylip-3.63.ebuild 961
-MD5 5a91c60c82f0719b92bc4cdc6835d63b phylip-3.62.ebuild 990
-MD5 097353e78166961bc0ff0fed19a2088f ChangeLog 1596
-MD5 e8b4df3df76800c376905734d8043cfa metadata.xml 216
-MD5 0481945687ffd40c06299b75ef705653 files/digest-phylip-3.62 64
-MD5 407269b8d1524b0f8e71dece76bdd291 files/digest-phylip-3.63 64

diff --git a/app-sci/phylip/files/digest-phylip-3.62 b/app-sci/phylip/files/digest-phylip-3.62
deleted file mode 100644 (file)
index 001d7d7..0000000
--- a/app-sci/phylip/files/digest-phylip-3.62
+++ /dev/null
@@ -1 +0,0 @@
-MD5 2f3858d2628e499cb6d7a817f359364b phylip-3.62.tar.gz 1046539

diff --git a/app-sci/phylip/files/digest-phylip-3.63 b/app-sci/phylip/files/digest-phylip-3.63
deleted file mode 100644 (file)
index 5a62a93..0000000
--- a/app-sci/phylip/files/digest-phylip-3.63
+++ /dev/null
@@ -1 +0,0 @@
-MD5 8bf06a775e68163f419e308597e08831 phylip-3.63.tar.bz2 601374

diff --git a/app-sci/phylip/metadata.xml b/app-sci/phylip/metadata.xml
deleted file mode 100644 (file)
index 8a4bcd4..0000000
--- a/app-sci/phylip/metadata.xml
+++ /dev/null
@@ -1,6 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
-<pkgmetadata>
-<herd>sci</herd>
-<maintainer><email>sediener@gentoo.org</email></maintainer>
-</pkgmetadata>

diff --git a/app-sci/phylip/phylip-3.62.ebuild b/app-sci/phylip/phylip-3.62.ebuild
deleted file mode 100644 (file)
index 1dda7d9..0000000
--- a/app-sci/phylip/phylip-3.62.ebuild
+++ /dev/null
@@ -1,42 +0,0 @@
-# Copyright 1999-2004 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/app-sci/phylip/phylip-3.62.ebuild,v 1.3 2004/11/03 02:39:14 j4rg0n Exp $
-
-inherit gcc
-
-DESCRIPTION="PHYLIP - The PHYLogeny Inference Package"
-HOMEPAGE="http://evolution.genetics.washington.edu/${PN}.html"
-SRC_URI="ftp://evolution.genetics.washington.edu/pub/${PN}/${P}.tar.gz"
-LICENSE="freedist"
-
-SLOT="0"
-KEYWORDS="x86 ~ppc ~ppc-macos"
-IUSE=""
-
-DEPEND="virtual/libc
-       virtual/x11"
-
-S=${WORKDIR}/${P}/src
-
-src_compile() {
-       sed -i -e "s/CFLAGS =/CFLAGS = ${CFLAGS}/" Makefile
-       sed -i -e "s/CC        = cc/CC        = $(gcc-getCC)/" Makefile
-       sed -i -e "s/DC        = cc/DC        = $(gcc-getCC)/" Makefile
-       mkdir ../fonts
-       emake -j1 all put || die
-       mv ../exe/font* ../fonts
-}
-
-src_install()
-{
-       cd ${WORKDIR}/${P}
-
-       dobin exe/*
-
-       dohtml phylip.html
-       insinto /usr/share/doc/${PF}/html/doc
-       doins doc/*
-
-       insinto /usr/share/${PN}/fonts
-       doins fonts/*
-}

diff --git a/app-sci/phylip/phylip-3.63.ebuild b/app-sci/phylip/phylip-3.63.ebuild
deleted file mode 100644 (file)
index 70d6dbd..0000000
--- a/app-sci/phylip/phylip-3.63.ebuild
+++ /dev/null
@@ -1,42 +0,0 @@
-# Copyright 1999-2004 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/app-sci/phylip/phylip-3.63.ebuild,v 1.1 2004/12/19 22:43:37 ribosome Exp $
-
-inherit gcc
-
-DESCRIPTION="PHYLIP - The PHYLogeny Inference Package"
-HOMEPAGE="http://evolution.genetics.washington.edu/phylip.html"
-SRC_URI="mirror://gentoo/${P}.tar.bz2"
-LICENSE="freedist"
-
-SLOT="0"
-KEYWORDS="~x86 ~ppc ~ppc-macos"
-IUSE=""
-
-DEPEND="virtual/libc
-       virtual/x11"
-
-S=${WORKDIR}/${P}/src
-
-src_compile() {
-       sed -i -e "s/CFLAGS =/CFLAGS = ${CFLAGS}/" Makefile
-       sed -i -e "s/CC        = cc/CC        = $(gcc-getCC)/" Makefile
-       sed -i -e "s/DC        = cc/DC        = $(gcc-getCC)/" Makefile
-       mkdir ../fonts
-       emake -j1 all put || die
-       mv ../exe/font* ../fonts
-}
-
-src_install()
-{
-       cd ${WORKDIR}/${P}
-
-       dobin exe/*
-
-       dohtml phylip.html
-       insinto /usr/share/doc/${PF}/html/doc
-       doins doc/*
-
-       insinto /usr/share/${PN}/fonts
-       doins fonts/*
-}