DIST R-3.4.1.tar.gz 30200109 BLAKE2B 03602e9a48759caee8ce047fa6273df7a54af089de4489e21953c0e3fc7bfdf720d924f1e0167d3dbf65f63ed42ac10dea8b45289b921cda1c0e6d25a0063ebb SHA512 19bd50c87dc001ef947c15c1760f27ac8986ff6b43c6d90d3093ae184e42963027ef06faf31ec57ac9e519af7a35a2f53f8ea23ef75d800ebbd02945cedc4651
-DIST R-3.5.3.tar.gz 30205979 BLAKE2B 60dde4c1a7874df0b113630577d943d581d9e0844383a5cb7eda7f62470177d541704a888c33ded216f8b1f088cda493d7716693f5e2451effe3639ce2286dd1 SHA512 077cbd4bc9f19a3a2485afbd4d8e08e0754ddcb9a10164cbc8478f239d5ed0ffaf6796929f154cce1c8aea549c32d460049fc036dc326174d1dbb0a1ddb5f5ef
-DIST R-3.6.0.tar.gz 30449618 BLAKE2B 2fb2f1252f5ead97ab42eb1f71fa0be1e8aec2f6cce182956ec1c35b43b70b58f579faf5f3ca11efb8e9c24a9ed836b5b690cb23858249bc7f575aca4709bc3b SHA512 b2e17b909b6387abb964492e2e9370f913295ca7ac99bab0e965c43ed3c4635e27468c326fb2bca3c529b03c731b0170d9e777a194ad4d6c5a983c050223d8c8
-DIST R-3.6.2.tar.gz 33311930 BLAKE2B 53f344e80e017064a275c271d98be714e210193931a120e7ebc79ee6cf0ebc0c24c090acc25560998f26600c05305147816ab782632d99beaea83b3a9b5e2a21 SHA512 17513e9f4dd27c61c11f7aa45227aeeeefb375bf5d4e193b471724f379a1b2da33e127cbe91aa175cbbbb048b892047e2f610280585c8159242a6c94790b07f9
DIST R-3.6.3.tar.gz 33308185 BLAKE2B f82751e21d3b502132f8f27d4fc47a921fb085a50c3da3b45e08fbbdd1ab3d42e89b4fa6653a570c21176d79f492277b1d0b86c3c9f4da1386d8b6e4771d4d2c SHA512 9b1dc78922e431bd1af81e6e560b10ad04d121718f680fed32db735d561fd40ea6028759976722db11559f1a78fe684119b766f0567128cb2ee5003aa87a0931
DIST R-78d6830e28ea90a046da79a9b4f70c39594bb6d6.bash_completion 13596 BLAKE2B 53338e4a1c4f68beb69247216e553dbcac47f660fbf032bfebf7a660e32d2cff5b11ed35411c52de7e1fd6e00bbf5b5ea19369a325fa0a38bd93d63dc3288cbd SHA512 9ccd19bb1b0c18a2f13035ccd6809447429e197e298fb4d1df808ef345d723b42f75a1b91c349f6dbb46e4a82e59ef33e11300c495d79b63d670d0c0f2b16a06
+++ /dev/null
-# Copyright 1999-2020 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=7
-
-inherit bash-completion-r1 autotools eutils flag-o-matic fortran-2 multilib toolchain-funcs
-
-# latest git commit for R bash completion: https://github.com/deepayan/rcompletion
-BCPV=78d6830e28ea90a046da79a9b4f70c39594bb6d6
-
-DESCRIPTION="Language and environment for statistical computing and graphics"
-HOMEPAGE="http://www.r-project.org/"
-SRC_URI="
- mirror://cran/src/base/R-3/${P}.tar.gz
- https://raw.githubusercontent.com/deepayan/rcompletion/${BCPV}/bash_completion/R -> ${PN}-${BCPV}.bash_completion"
-
-LICENSE="|| ( GPL-2 GPL-3 ) LGPL-2.1"
-SLOT="0"
-KEYWORDS="~amd64 ~arm64 ~hppa ~ia64 ~sparc ~x86 ~amd64-linux ~x86-linux ~x64-macos"
-IUSE="cairo doc icu java jpeg lapack minimal nls openmp perl png prefix profile readline static-libs tiff tk X"
-REQUIRED_USE="png? ( || ( cairo X ) ) jpeg? ( || ( cairo X ) ) tiff? ( || ( cairo X ) )"
-
-CDEPEND="
- app-arch/bzip2:0=
- app-arch/xz-utils:0=
- app-text/ghostscript-gpl
- >=dev-libs/libpcre-8.35:3=
- net-libs/libtirpc
- net-misc/curl
- virtual/blas:0
- || ( >=sys-apps/coreutils-8.15 app-misc/realpath )
- cairo? ( x11-libs/cairo:0=[X=] x11-libs/pango:0= )
- icu? ( dev-libs/icu:= )
- jpeg? ( virtual/jpeg:0 )
- lapack? ( virtual/lapack:0 )
- perl? ( dev-lang/perl )
- png? ( media-libs/libpng:0= )
- readline? ( sys-libs/readline:0= )
- tiff? ( media-libs/tiff:0= )
- tk? ( dev-lang/tk:0= )
- X? ( x11-libs/libXmu:0= x11-misc/xdg-utils )"
-
-DEPEND="${CDEPEND}
- virtual/pkgconfig
- doc? (
- virtual/latex-base
- dev-texlive/texlive-fontsrecommended
- )"
-
-RDEPEND="${CDEPEND}
- >=sys-libs/zlib-1.2.5.1-r2:0[minizip]
- java? ( >=virtual/jre-1.5 )"
-
-RESTRICT="minimal? ( test )"
-
-PATCHES=(
- "${FILESDIR}"/${PN}-3.4.1-parallel.patch
- "${FILESDIR}"/${PN}-3.4.1-rmath-shared.patch
-)
-
-pkg_pretend() {
- [[ ${MERGE_TYPE} != binary ]] && use openmp && tc-check-openmp
-}
-
-pkg_setup() {
- if [[ ${MERGE_TYPE} != binary ]] && use openmp; then
- if ! tc-check-openmp; then
- ewarn "OpenMP is not available in your current selected compiler"
- die "need openmp capable compiler"
- fi
- FORTRAN_NEED_OPENMP=1
- fi
- fortran-2_pkg_setup
- filter-ldflags -Wl,-Bdirect -Bdirect
- # avoid using existing R installation
- unset R_HOME
- # Temporary fix for bug #419761
- if [[ ($(tc-getCC) == *gcc) && ($(gcc-version) == 4.7) ]]; then
- append-flags -fno-ipa-cp-clone
- fi
-}
-
-src_prepare() {
- default
-
- # fix packages.html for doc (gentoo bug #205103)
- sed -e "s:../../../library:../../../../$(get_libdir)/R/library:g" \
- -i src/library/tools/R/Rd.R || die
-
- # fix Rscript path when installed (gentoo bug #221061)
- sed -e "s:-DR_HOME='\"\$(rhome)\"':-DR_HOME='\"${EROOT}/usr/$(get_libdir)/${PN}\"':" \
- -i src/unix/Makefile.in || die "sed unix Makefile failed"
-
- # fix HTML links to manual (gentoo bug #273957)
- sed -e 's:\.\./manual/:manual/:g' \
- -i $(grep -Flr ../manual/ doc) || die "sed for HTML links failed"
-
- use lapack && \
- export LAPACK_LIBS="$($(tc-getPKG_CONFIG) --libs lapack)"
-
- if use X; then
- export R_BROWSER="$(type -p xdg-open)"
- export R_PDFVIEWER="$(type -p xdg-open)"
- fi
- use perl && \
- export PERL5LIB="${S}/share/perl:${PERL5LIB:+:}${PERL5LIB}"
-
- # don't search /usr/local
- sed -i -e '/FLAGS=.*\/local\//c\: # removed by ebuild' configure.ac || die
- # Fix for Darwin (OS X)
- if use prefix; then
- if [[ ${CHOST} == *-darwin* ]] ; then
- sed -e 's:-install_name libR.dylib:-install_name ${libdir}/R/lib/libR.dylib:' \
- -e 's:-install_name libRlapack.dylib:-install_name ${libdir}/R/lib/libRlapack.dylib:' \
- -e 's:-install_name libRblas.dylib:-install_name ${libdir}/R/lib/libRblas.dylib:' \
- -e "/SHLIB_EXT/s/\.so/.dylib/" \
- -i configure.ac || die
- # sort of "undo" 2.14.1-rmath-shared.patch
- sed -e "s:-Wl,-soname=libRmath.so:-install_name ${EROOT}/usr/$(get_libdir)/libRmath.dylib:" \
- -i src/nmath/standalone/Makefile.in || die
- else
- append-ldflags -Wl,-rpath="${EROOT}/usr/$(get_libdir)/R/lib"
- fi
- fi
- AT_M4DIR=m4
- eautoreconf
-}
-
-src_configure() {
- # --with-system-tre \
- # tre is patched from upstream
- econf \
- --enable-byte-compiled-packages \
- --enable-R-shlib \
- --disable-R-framework \
- --with-blas="$($(tc-getPKG_CONFIG) --libs blas)" \
- rdocdir="${EPREFIX}/usr/share/doc/${PF}" \
- $(use_enable java) \
- $(use_enable nls) \
- $(use_enable openmp) \
- $(use_enable profile R-profiling) \
- $(use_enable profile memory-profiling) \
- $(use_enable static-libs static) \
- $(use_enable static-libs R-static-lib) \
- $(use_with cairo) \
- $(use_with icu ICU) \
- $(use_with jpeg jpeglib) \
- $(use_with lapack) \
- $(use_with !minimal recommended-packages) \
- $(use_with png libpng) \
- $(use_with readline) \
- $(use_with tiff libtiff) \
- $(use_with tk tcltk) \
- $(use_with tk tk-config "${EPREFIX}"/usr/$(get_libdir)/tkConfig.sh) \
- $(use_with tk tcl-config "${EPREFIX}"/usr/$(get_libdir)/tclConfig.sh) \
- $(use_with X x)
-}
-
-src_compile() {
- export VARTEXFONTS="${T}/fonts"
- emake AR="$(tc-getAR)"
- emake -C src/nmath/standalone \
- shared $(use static-libs && echo static) AR="$(tc-getAR)"
- use doc && emake info pdf
-}
-
-src_install() {
- default
- emake -j1 -C src/nmath/standalone DESTDIR="${D}" install
-
- if use doc; then
- emake DESTDIR="${D}" install-info install-pdf
- dosym ../manual /usr/share/doc/${PF}/html/manual
- fi
-
- cat > 99R <<-EOF
- LDPATH=${EROOT}/usr/$(get_libdir)/${PN}/lib
- R_HOME=${EROOT}/usr/$(get_libdir)/${PN}
- EOF
- doenvd 99R
- newbashcomp "${DISTDIR}"/${PN}-${BCPV}.bash_completion ${PN}
- # The buildsystem has a different understanding of install_names than
- # we require. Since it builds modules like shared objects (wrong), many
- # objects (all modules) get an incorrect install_name. Fixing the build
- # system here is not really trivial.
- if [[ ${CHOST} == *-darwin* ]] ; then
- local mod
- pushd "${ED}"/usr/$(get_libdir)/R > /dev/null
- for mod in $(find . -name "*.dylib") ; do
- mod=${mod#./}
- install_name_tool -id "${EPREFIX}/usr/$(get_libdir)/R/${mod}" \
- "${mod}"
- done
- popd > /dev/null
- fi
- docompress -x /usr/share/doc/${PF}/{BioC_mirrors.csv,CRAN_mirrors.csv,KEYWORDS.db,NEWS.rds}
-}
-
-pkg_postinst() {
- if use java; then
- einfo "Re-initializing java paths for ${P}"
- R CMD javareconf
- fi
-}
+++ /dev/null
-# Copyright 1999-2020 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=7
-
-inherit bash-completion-r1 autotools eutils flag-o-matic fortran-2 multilib toolchain-funcs
-
-# latest git commit for R bash completion: https://github.com/deepayan/rcompletion
-BCPV=78d6830e28ea90a046da79a9b4f70c39594bb6d6
-
-DESCRIPTION="Language and environment for statistical computing and graphics"
-HOMEPAGE="http://www.r-project.org/"
-SRC_URI="
- mirror://cran/src/base/R-3/${P}.tar.gz
- https://raw.githubusercontent.com/deepayan/rcompletion/${BCPV}/bash_completion/R -> ${PN}-${BCPV}.bash_completion"
-
-LICENSE="|| ( GPL-2 GPL-3 ) LGPL-2.1"
-SLOT="0"
-KEYWORDS="~amd64 ~arm64 ~hppa ~ia64 ~sparc ~x86 ~amd64-linux ~x86-linux ~x64-macos"
-IUSE="cairo doc icu java jpeg lapack minimal nls openmp perl png prefix profile readline static-libs tiff tk X"
-REQUIRED_USE="png? ( || ( cairo X ) ) jpeg? ( || ( cairo X ) ) tiff? ( || ( cairo X ) )"
-
-CDEPEND="
- app-arch/bzip2:0=
- app-arch/xz-utils:0=
- app-text/ghostscript-gpl
- >=dev-libs/libpcre-8.35:3=
- net-libs/libtirpc
- net-misc/curl
- virtual/blas:0
- || ( >=sys-apps/coreutils-8.15 app-misc/realpath )
- cairo? ( x11-libs/cairo:0=[X=] x11-libs/pango:0= )
- icu? ( dev-libs/icu:= )
- jpeg? ( virtual/jpeg:0 )
- lapack? ( virtual/lapack:0 )
- perl? ( dev-lang/perl )
- png? ( media-libs/libpng:0= )
- readline? ( sys-libs/readline:0= )
- tiff? ( media-libs/tiff:0= )
- tk? ( dev-lang/tk:0= )
- X? ( x11-libs/libXmu:0= x11-misc/xdg-utils )"
-
-DEPEND="${CDEPEND}
- virtual/pkgconfig
- doc? (
- virtual/latex-base
- dev-texlive/texlive-fontsrecommended
- )"
-
-RDEPEND="${CDEPEND}
- >=sys-libs/zlib-1.2.5.1-r2:0[minizip]
- java? ( >=virtual/jre-1.5 )"
-
-RESTRICT="minimal? ( test )"
-
-PATCHES=(
- "${FILESDIR}"/${PN}-3.4.1-parallel.patch
- "${FILESDIR}"/${PN}-3.4.1-rmath-shared.patch
-)
-
-pkg_pretend() {
- [[ ${MERGE_TYPE} != binary ]] && use openmp && tc-check-openmp
-}
-
-pkg_setup() {
- if [[ ${MERGE_TYPE} != binary ]] && use openmp; then
- if ! tc-check-openmp; then
- ewarn "OpenMP is not available in your current selected compiler"
- die "need openmp capable compiler"
- fi
- FORTRAN_NEED_OPENMP=1
- fi
- fortran-2_pkg_setup
- filter-ldflags -Wl,-Bdirect -Bdirect
- # avoid using existing R installation
- unset R_HOME
- # Temporary fix for bug #419761
- if [[ ($(tc-getCC) == *gcc) && ($(gcc-version) == 4.7) ]]; then
- append-flags -fno-ipa-cp-clone
- fi
-}
-
-src_prepare() {
- default
-
- # fix packages.html for doc (gentoo bug #205103)
- sed -e "s:../../../library:../../../../$(get_libdir)/R/library:g" \
- -i src/library/tools/R/Rd.R || die
-
- # fix Rscript path when installed (gentoo bug #221061)
- sed -e "s:-DR_HOME='\"\$(rhome)\"':-DR_HOME='\"${EROOT}/usr/$(get_libdir)/${PN}\"':" \
- -i src/unix/Makefile.in || die "sed unix Makefile failed"
-
- # fix HTML links to manual (gentoo bug #273957)
- sed -e 's:\.\./manual/:manual/:g' \
- -i $(grep -Flr ../manual/ doc) || die "sed for HTML links failed"
-
- use lapack && \
- export LAPACK_LIBS="$($(tc-getPKG_CONFIG) --libs lapack)"
-
- if use X; then
- export R_BROWSER="$(type -p xdg-open)"
- export R_PDFVIEWER="$(type -p xdg-open)"
- fi
- use perl && \
- export PERL5LIB="${S}/share/perl:${PERL5LIB:+:}${PERL5LIB}"
-
- # don't search /usr/local
- sed -i -e '/FLAGS=.*\/local\//c\: # removed by ebuild' configure.ac || die
- # Fix for Darwin (OS X)
- if use prefix; then
- if [[ ${CHOST} == *-darwin* ]] ; then
- sed -e 's:-install_name libR.dylib:-install_name ${libdir}/R/lib/libR.dylib:' \
- -e 's:-install_name libRlapack.dylib:-install_name ${libdir}/R/lib/libRlapack.dylib:' \
- -e 's:-install_name libRblas.dylib:-install_name ${libdir}/R/lib/libRblas.dylib:' \
- -e "/SHLIB_EXT/s/\.so/.dylib/" \
- -i configure.ac || die
- # sort of "undo" 2.14.1-rmath-shared.patch
- sed -e "s:-Wl,-soname=libRmath.so:-install_name ${EROOT}/usr/$(get_libdir)/libRmath.dylib:" \
- -i src/nmath/standalone/Makefile.in || die
- else
- append-ldflags -Wl,-rpath="${EROOT}/usr/$(get_libdir)/R/lib"
- fi
- fi
- AT_M4DIR=m4
- eautoreconf
-}
-
-src_configure() {
- # --with-system-tre \
- # tre is patched from upstream
- econf \
- --enable-byte-compiled-packages \
- --enable-R-shlib \
- --disable-R-framework \
- --with-blas="$($(tc-getPKG_CONFIG) --libs blas)" \
- rdocdir="${EPREFIX}/usr/share/doc/${PF}" \
- $(use_enable java) \
- $(use_enable nls) \
- $(use_enable openmp) \
- $(use_enable profile R-profiling) \
- $(use_enable profile memory-profiling) \
- $(use_enable static-libs static) \
- $(use_enable static-libs R-static-lib) \
- $(use_with cairo) \
- $(use_with icu ICU) \
- $(use_with jpeg jpeglib) \
- $(use_with lapack) \
- $(use_with !minimal recommended-packages) \
- $(use_with png libpng) \
- $(use_with readline) \
- $(use_with tiff libtiff) \
- $(use_with tk tcltk) \
- $(use_with tk tk-config "${EPREFIX}"/usr/$(get_libdir)/tkConfig.sh) \
- $(use_with tk tcl-config "${EPREFIX}"/usr/$(get_libdir)/tclConfig.sh) \
- $(use_with X x)
-}
-
-src_compile() {
- export VARTEXFONTS="${T}/fonts"
- emake AR="$(tc-getAR)"
- emake -C src/nmath/standalone \
- shared $(use static-libs && echo static) AR="$(tc-getAR)"
- use doc && emake info pdf
-}
-
-src_install() {
- default
- emake -j1 -C src/nmath/standalone DESTDIR="${D}" install
-
- if use doc; then
- emake DESTDIR="${D}" install-info install-pdf
- dosym ../manual /usr/share/doc/${PF}/html/manual
- fi
-
- cat > 99R <<-EOF
- LDPATH=${EROOT}/usr/$(get_libdir)/${PN}/lib
- R_HOME=${EROOT}/usr/$(get_libdir)/${PN}
- EOF
- doenvd 99R
- newbashcomp "${DISTDIR}"/${PN}-${BCPV}.bash_completion ${PN}
- # The buildsystem has a different understanding of install_names than
- # we require. Since it builds modules like shared objects (wrong), many
- # objects (all modules) get an incorrect install_name. Fixing the build
- # system here is not really trivial.
- if [[ ${CHOST} == *-darwin* ]] ; then
- local mod
- pushd "${ED}"/usr/$(get_libdir)/R > /dev/null
- for mod in $(find . -name "*.dylib") ; do
- mod=${mod#./}
- install_name_tool -id "${EPREFIX}/usr/$(get_libdir)/R/${mod}" \
- "${mod}"
- done
- popd > /dev/null
- fi
- docompress -x /usr/share/doc/${PF}/{BioC_mirrors.csv,CRAN_mirrors.csv,KEYWORDS.db,NEWS.rds}
-}
-
-pkg_postinst() {
- if use java; then
- einfo "Re-initializing java paths for ${P}"
- R CMD javareconf
- fi
-}
+++ /dev/null
-# Copyright 1999-2020 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=7
-
-inherit bash-completion-r1 autotools eutils flag-o-matic fortran-2 multilib toolchain-funcs
-
-# latest git commit for R bash completion: https://github.com/deepayan/rcompletion
-BCPV=78d6830e28ea90a046da79a9b4f70c39594bb6d6
-
-DESCRIPTION="Language and environment for statistical computing and graphics"
-HOMEPAGE="http://www.r-project.org/"
-SRC_URI="
- mirror://cran/src/base/R-3/${P}.tar.gz
- https://raw.githubusercontent.com/deepayan/rcompletion/${BCPV}/bash_completion/R -> ${PN}-${BCPV}.bash_completion"
-
-LICENSE="|| ( GPL-2 GPL-3 ) LGPL-2.1"
-SLOT="0"
-KEYWORDS="~amd64 ~arm64 ~hppa ~ia64 ~sparc ~x86 ~amd64-linux ~x86-linux ~x64-macos"
-IUSE="cairo doc icu java jpeg lapack minimal nls openmp perl png prefix profile readline static-libs tiff tk X"
-REQUIRED_USE="png? ( || ( cairo X ) ) jpeg? ( || ( cairo X ) ) tiff? ( || ( cairo X ) )"
-
-CDEPEND="
- app-arch/bzip2:0=
- app-arch/xz-utils:0=
- app-text/ghostscript-gpl
- dev-libs/libpcre:3=
- net-libs/libtirpc
- net-misc/curl
- virtual/blas:0
- || ( sys-apps/coreutils app-misc/realpath )
- cairo? ( x11-libs/cairo:0=[X=] x11-libs/pango:0= )
- icu? ( dev-libs/icu:= )
- jpeg? ( virtual/jpeg:0 )
- lapack? ( virtual/lapack:0 )
- perl? ( dev-lang/perl )
- png? ( media-libs/libpng:0= )
- readline? ( sys-libs/readline:0= )
- tiff? ( media-libs/tiff:0= )
- tk? ( dev-lang/tk:0= )
- X? ( x11-libs/libXmu:0= x11-misc/xdg-utils )"
-
-DEPEND="${CDEPEND}
- virtual/pkgconfig
- doc? (
- virtual/latex-base
- dev-texlive/texlive-fontsrecommended
- )"
-
-RDEPEND="${CDEPEND}
- sys-libs/zlib:0[minizip]
- java? ( >=virtual/jre-1.5 )"
-
-RESTRICT="minimal? ( test )"
-
-PATCHES=(
- "${FILESDIR}"/${PN}-3.4.1-parallel.patch
- "${FILESDIR}"/${PN}-3.4.1-rmath-shared.patch
- "${FILESDIR}"/${PN}-3.6.2-no-LDFLAGS-in-libR-pkg-config.patch
- "${FILESDIR}"/${PN}-3.6.2-no-gzip-doc.patch
-)
-
-pkg_pretend() {
- [[ ${MERGE_TYPE} != binary ]] && use openmp && tc-check-openmp
-}
-
-pkg_setup() {
- if [[ ${MERGE_TYPE} != binary ]] && use openmp; then
- if ! tc-check-openmp; then
- ewarn "OpenMP is not available in your current selected compiler"
- die "need openmp capable compiler"
- fi
- FORTRAN_NEED_OPENMP=1
- fi
- fortran-2_pkg_setup
- filter-ldflags -Wl,-Bdirect -Bdirect
- # avoid using existing R installation
- unset R_HOME
- # Temporary fix for bug #419761
- if [[ ($(tc-getCC) == *gcc) && ($(gcc-version) == 4.7) ]]; then
- append-flags -fno-ipa-cp-clone
- fi
-}
-
-src_prepare() {
- default
-
- # fix packages.html for doc (gentoo bug #205103)
- sed -e "s:../../../library:../../../../$(get_libdir)/R/library:g" \
- -i src/library/tools/R/Rd.R || die
-
- # fix Rscript path when installed (gentoo bug #221061)
- sed -e "s:-DR_HOME='\"\$(rhome)\"':-DR_HOME='\"${EROOT}/usr/$(get_libdir)/${PN}\"':" \
- -i src/unix/Makefile.in || die "sed unix Makefile failed"
-
- # fix HTML links to manual (gentoo bug #273957)
- sed -e 's:\.\./manual/:manual/:g' \
- -i $(grep -Flr ../manual/ doc) || die "sed for HTML links failed"
-
- use lapack && \
- export LAPACK_LIBS="$($(tc-getPKG_CONFIG) --libs lapack)"
-
- if use X; then
- export R_BROWSER="$(type -p xdg-open)"
- export R_PDFVIEWER="$(type -p xdg-open)"
- fi
- use perl && \
- export PERL5LIB="${S}/share/perl:${PERL5LIB:+:}${PERL5LIB}"
-
- # don't search /usr/local
- sed -i -e '/FLAGS=.*\/local\//c\: # removed by ebuild' configure.ac || die
- # Fix for Darwin (OS X)
- if use prefix; then
- if [[ ${CHOST} == *-darwin* ]] ; then
- sed -e 's:-install_name libR.dylib:-install_name ${libdir}/R/lib/libR.dylib:' \
- -e 's:-install_name libRlapack.dylib:-install_name ${libdir}/R/lib/libRlapack.dylib:' \
- -e 's:-install_name libRblas.dylib:-install_name ${libdir}/R/lib/libRblas.dylib:' \
- -e "/SHLIB_EXT/s/\.so/.dylib/" \
- -i configure.ac || die
- # sort of "undo" 2.14.1-rmath-shared.patch
- sed -e "s:-Wl,-soname=libRmath.so:-install_name ${EROOT}/usr/$(get_libdir)/libRmath.dylib:" \
- -i src/nmath/standalone/Makefile.in || die
- else
- append-ldflags -Wl,-rpath="${EROOT}/usr/$(get_libdir)/R/lib"
- fi
- fi
- AT_M4DIR=m4
- eautoreconf
-}
-
-src_configure() {
- # --with-system-tre \
- # tre is patched from upstream
- econf \
- --enable-byte-compiled-packages \
- --enable-R-shlib \
- --disable-R-framework \
- --with-blas="$($(tc-getPKG_CONFIG) --libs blas)" \
- rdocdir="${EPREFIX}/usr/share/doc/${PF}" \
- $(use_enable java) \
- $(use_enable nls) \
- $(use_enable openmp) \
- $(use_enable profile R-profiling) \
- $(use_enable profile memory-profiling) \
- $(use_enable static-libs static) \
- $(use_enable static-libs R-static-lib) \
- $(use_with cairo) \
- $(use_with icu ICU) \
- $(use_with jpeg jpeglib) \
- $(use_with lapack) \
- $(use_with !minimal recommended-packages) \
- $(use_with png libpng) \
- $(use_with readline) \
- $(use_with tiff libtiff) \
- $(use_with tk tcltk) \
- $(use_with tk tk-config "${EPREFIX}"/usr/$(get_libdir)/tkConfig.sh) \
- $(use_with tk tcl-config "${EPREFIX}"/usr/$(get_libdir)/tclConfig.sh) \
- $(use_with X x)
-}
-
-src_compile() {
- export VARTEXFONTS="${T}/fonts"
- emake AR="$(tc-getAR)"
- emake -C src/nmath/standalone \
- shared $(use static-libs && echo static) AR="$(tc-getAR)"
- use doc && emake info pdf
-}
-
-src_install() {
- default
- emake -j1 -C src/nmath/standalone DESTDIR="${D}" install
-
- if use doc; then
- emake DESTDIR="${D}" install-info install-pdf
- dosym ../manual /usr/share/doc/${PF}/html/manual
- fi
-
- cat > 99R <<-EOF
- LDPATH=${EROOT}/usr/$(get_libdir)/${PN}/lib
- R_HOME=${EROOT}/usr/$(get_libdir)/${PN}
- EOF
- doenvd 99R
- newbashcomp "${DISTDIR}"/${PN}-${BCPV}.bash_completion ${PN}
- # The buildsystem has a different understanding of install_names than
- # we require. Since it builds modules like shared objects (wrong), many
- # objects (all modules) get an incorrect install_name. Fixing the build
- # system here is not really trivial.
- if [[ ${CHOST} == *-darwin* ]] ; then
- local mod
- pushd "${ED}"/usr/$(get_libdir)/R > /dev/null
- for mod in $(find . -name "*.dylib") ; do
- mod=${mod#./}
- install_name_tool -id "${EPREFIX}/usr/$(get_libdir)/R/${mod}" \
- "${mod}"
- done
- popd > /dev/null
- fi
- docompress -x /usr/share/doc/${PF}/{BioC_mirrors.csv,CRAN_mirrors.csv,KEYWORDS.db,NEWS.rds}
-}
-
-pkg_postinst() {
- if use java; then
- einfo "Re-initializing java paths for ${P}"
- R CMD javareconf
- fi
-}
projects / gentoo.git / commitdiff