--- /dev/null
+From 81958d302494e137f98a8b1d7869841532f90388 Mon Sep 17 00:00:00 2001
+From: JaimeIvanCervantes <jimmycc80@hotmail.com>
+Date: Fri, 16 Jun 2017 13:21:45 -0700
+Subject: [PATCH] multi_convolution: Fix for incorrect template parameter type
+ when using unsigned int N for TinyVector SIZE. (Fixes #414)
+
+---
+ include/vigra/multi_convolution.hxx | 28 ++++++++++++++--------------
+ 1 file changed, 14 insertions(+), 14 deletions(-)
+
+diff --git a/include/vigra/multi_convolution.hxx b/include/vigra/multi_convolution.hxx
+index 1b5efa740..ec89bcf58 100644
+--- a/include/vigra/multi_convolution.hxx
++++ b/include/vigra/multi_convolution.hxx
+@@ -1426,7 +1426,7 @@ gaussianSmoothMultiArray(MultiArrayView<N, T1, S1> const & source,
+ class T2, class S2>
+ void
+ gaussianGradientMultiArray(MultiArrayView<N, T1, S1> const & source,
+- MultiArrayView<N, TinyVector<T2, N>, S2> dest,
++ MultiArrayView<N, TinyVector<T2, int(N)>, S2> dest,
+ double sigma,
+ ConvolutionOptions<N> opt = ConvolutionOptions<N>());
+
+@@ -1435,7 +1435,7 @@ gaussianSmoothMultiArray(MultiArrayView<N, T1, S1> const & source,
+ class T2, class S2>
+ void
+ gaussianGradientMultiArray(MultiArrayView<N, T1, S1> const & source,
+- MultiArrayView<N, TinyVector<T2, N>, S2> dest,
++ MultiArrayView<N, TinyVector<T2, int(N)>, S2> dest,
+ ConvolutionOptions<N> opt);
+
+ // likewise, but execute algorithm in parallel
+@@ -1443,7 +1443,7 @@ gaussianSmoothMultiArray(MultiArrayView<N, T1, S1> const & source,
+ class T2, class S2>
+ void
+ gaussianGradientMultiArray(MultiArrayView<N, T1, S1> const & source,
+- MultiArrayView<N, TinyVector<T2, N>, S2> dest,
++ MultiArrayView<N, TinyVector<T2, int(N)>, S2> dest,
+ BlockwiseConvolutionOptions<N> opt);
+ }
+ \endcode
+@@ -1590,7 +1590,7 @@ template <unsigned int N, class T1, class S1,
+ class T2, class S2>
+ inline void
+ gaussianGradientMultiArray(MultiArrayView<N, T1, S1> const & source,
+- MultiArrayView<N, TinyVector<T2, N>, S2> dest,
++ MultiArrayView<N, TinyVector<T2, int(N)>, S2> dest,
+ ConvolutionOptions<N> opt )
+ {
+ if(opt.to_point != typename MultiArrayShape<N>::type())
+@@ -1614,7 +1614,7 @@ template <unsigned int N, class T1, class S1,
+ class T2, class S2>
+ inline void
+ gaussianGradientMultiArray(MultiArrayView<N, T1, S1> const & source,
+- MultiArrayView<N, TinyVector<T2, N>, S2> dest,
++ MultiArrayView<N, TinyVector<T2, int(N)>, S2> dest,
+ double sigma,
+ ConvolutionOptions<N> opt = ConvolutionOptions<N>())
+ {
+@@ -1653,7 +1653,7 @@ gaussianGradientMagnitudeImpl(MultiArrayView<N+1, T1, S1> const & src,
+ dest.init(0.0);
+
+ typedef typename NumericTraits<T1>::RealPromote TmpType;
+- MultiArray<N, TinyVector<TmpType, N> > grad(dest.shape());
++ MultiArray<N, TinyVector<TmpType, int(N)> > grad(dest.shape());
+
+ using namespace multi_math;
+
+@@ -1771,7 +1771,7 @@ gaussianGradientMagnitude(MultiArrayView<N+1, Multiband<T1>, S1> const & src,
+ class T2, class S2>
+ void
+ symmetricGradientMultiArray(MultiArrayView<N, T1, S1> const & source,
+- MultiArrayView<N, TinyVector<T2, N>, S2> dest,
++ MultiArrayView<N, TinyVector<T2, int(N)>, S2> dest,
+ ConvolutionOptions<N> opt = ConvolutionOptions<N>());
+
+ // execute algorithm in parallel
+@@ -1779,7 +1779,7 @@ gaussianGradientMagnitude(MultiArrayView<N+1, Multiband<T1>, S1> const & src,
+ class T2, class S2>
+ void
+ symmetricGradientMultiArray(MultiArrayView<N, T1, S1> const & source,
+- MultiArrayView<N, TinyVector<T2, N>, S2> dest,
++ MultiArrayView<N, TinyVector<T2, int(N)>, S2> dest,
+ BlockwiseConvolutionOptions<N> opt);
+ }
+ \endcode
+@@ -1895,7 +1895,7 @@ template <unsigned int N, class T1, class S1,
+ class T2, class S2>
+ inline void
+ symmetricGradientMultiArray(MultiArrayView<N, T1, S1> const & source,
+- MultiArrayView<N, TinyVector<T2, N>, S2> dest,
++ MultiArrayView<N, TinyVector<T2, int(N)>, S2> dest,
+ ConvolutionOptions<N> opt = ConvolutionOptions<N>())
+ {
+ if(opt.to_point != typename MultiArrayShape<N>::type())
+@@ -2214,14 +2214,14 @@ laplacianOfGaussianMultiArray(MultiArrayView<N, T1, S1> const & source,
+ template <unsigned int N, class T1, class S1,
+ class T2, class S2>
+ void
+- gaussianDivergenceMultiArray(MultiArrayView<N, TinyVector<T1, N>, S1> const & vectorField,
++ gaussianDivergenceMultiArray(MultiArrayView<N, TinyVector<T1, int(N)>, S1> const & vectorField,
+ MultiArrayView<N, T2, S2> divergence,
+ ConvolutionOptions<N> const & opt);
+
+ template <unsigned int N, class T1, class S1,
+ class T2, class S2>
+ void
+- gaussianDivergenceMultiArray(MultiArrayView<N, TinyVector<T1, N>, S1> const & vectorField,
++ gaussianDivergenceMultiArray(MultiArrayView<N, TinyVector<T1, int(N)>, S1> const & vectorField,
+ MultiArrayView<N, T2, S2> divergence,
+ double sigma,
+ ConvolutionOptions<N> opt = ConvolutionOptions<N>());
+@@ -2231,7 +2231,7 @@ laplacianOfGaussianMultiArray(MultiArrayView<N, T1, S1> const & source,
+ template <unsigned int N, class T1, class S1,
+ class T2, class S2>
+ void
+- gaussianDivergenceMultiArray(MultiArrayView<N, TinyVector<T1, N>, S1> const & vectorField,
++ gaussianDivergenceMultiArray(MultiArrayView<N, TinyVector<T1, int(N)>, S1> const & vectorField,
+ MultiArrayView<N, T2, S2> divergence,
+ BlockwiseConvolutionOptions<N> const & opt);
+ }
+@@ -2324,7 +2324,7 @@ gaussianDivergenceMultiArray(Iterator vectorField, Iterator vectorFieldEnd,
+ template <unsigned int N, class T1, class S1,
+ class T2, class S2>
+ inline void
+-gaussianDivergenceMultiArray(MultiArrayView<N, TinyVector<T1, N>, S1> const & vectorField,
++gaussianDivergenceMultiArray(MultiArrayView<N, TinyVector<T1, int(N)>, S1> const & vectorField,
+ MultiArrayView<N, T2, S2> divergence,
+ ConvolutionOptions<N> const & opt)
+ {
+@@ -2338,7 +2338,7 @@ gaussianDivergenceMultiArray(MultiArrayView<N, TinyVector<T1, N>, S1> const & ve
+ template <unsigned int N, class T1, class S1,
+ class T2, class S2>
+ inline void
+-gaussianDivergenceMultiArray(MultiArrayView<N, TinyVector<T1, N>, S1> const & vectorField,
++gaussianDivergenceMultiArray(MultiArrayView<N, TinyVector<T1, int(N)>, S1> const & vectorField,
+ MultiArrayView<N, T2, S2> divergence,
+ double sigma,
+ ConvolutionOptions<N> opt = ConvolutionOptions<N>())
--- /dev/null
+# Copyright 1999-2018 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=6
+MY_P="${P}-src"
+MY_V="${PV//\./-}"
+PYTHON_COMPAT=( python2_7 )
+PYTHON_REQ_USE="threads,xml"
+
+inherit cmake-utils python-r1
+
+DESCRIPTION="C++ computer vision library emphasizing customizable algorithms and structures"
+HOMEPAGE="https://ukoethe.github.io/vigra/"
+
+if [[ ${PV} == *9999 ]] ; then
+ EGIT_REPO_URI="https://github.com/ukoethe/${PN}.git"
+ inherit git-r3
+else
+ SRC_URI="https://github.com/ukoethe/${PN}/releases/download/Version-${MY_V}/${MY_P}.tar.gz"
+ KEYWORDS="~amd64 ~sparc ~x86 ~amd64-linux ~x86-linux ~sparc-solaris ~x64-solaris ~x86-solaris"
+fi
+
+LICENSE="MIT"
+SLOT="0"
+IUSE="doc +fftw +hdf5 +jpeg mpi openexr +png +python test +tiff valgrind"
+
+# runtime dependency on python:2.7 is required by the vigra-config script
+RDEPEND="
+ dev-lang/python:2.7
+ >=dev-libs/boost-1.52.0-r6:=[python?,${PYTHON_USEDEP}]
+ fftw? ( sci-libs/fftw:3.0 )
+ hdf5? ( >=sci-libs/hdf5-1.8.0:=[mpi?] )
+ jpeg? ( virtual/jpeg:0 )
+ openexr? ( media-libs/openexr:= )
+ png? ( media-libs/libpng:0= )
+ python? ( ${PYTHON_DEPS} dev-python/numpy[${PYTHON_USEDEP}] )
+ tiff? ( media-libs/tiff:0= )
+ valgrind? ( dev-util/valgrind )"
+
+DEPEND="${RDEPEND}
+ doc? (
+ app-doc/doxygen
+ python? ( >=dev-python/sphinx-1.1.3-r5[${PYTHON_USEDEP}] )
+ )
+ test? ( >=dev-python/nose-1.1.2-r1[${PYTHON_USEDEP}] )"
+
+REQUIRED_USE="
+ doc? ( hdf5 fftw )
+ python? ( hdf5 ${PYTHON_REQUIRED_USE} )
+ test? ( hdf5 python fftw )"
+
+# Severely broken, also disabled in Fedora, bugs #390447, #653442
+RESTRICT="test"
+
+DOCS=( README.md )
+
+PATCHES=(
+ "${FILESDIR}/${P}-fix-incorrect-template-parameter-type.patch"
+)
+
+pkg_setup() {
+ use python && python_setup
+}
+
+src_prepare() {
+ einfo "Removing shipped docs and VCS files"
+ rm -rf doc || die
+ rm .git* .travis.yml || die
+
+ cmake-utils_src_prepare
+
+ # Don't use python_fix_shebang because we can't put this behind USE="python"
+ sed -i -e '/env/s:python:python2:' config/vigra-config.in || die
+}
+
+src_configure() {
+ vigra_configure() {
+ local libdir="$(get_libdir)"
+
+ local mycmakeargs=(
+ -DAUTOEXEC_TESTS=OFF
+ -DDOCDIR="${BUILD_DIR}/doc"
+ -DDOCINSTALL="share/doc/${P}"
+ -DLIBDIR_SUFFIX="${libdir/lib}"
+ -DUSE_DOC=$(usex doc ON OFF) # unused
+ -DUSE_FFTW3=$(usex fftw ON OFF) # unused
+ -DUSE_JPEG=$(usex jpeg ON OFF) # unused
+ -DUSE_MPI=$(usex mpi ON OFF) # unused
+ -DUSE_PNG=$(usex png ON OFF) # unused
+ -DUSE_TIFF=$(usex tiff ON OFF) # unused
+ -DWITH_HDF5=$(usex hdf5 ON OFF)
+ -DWITH_OPENEXR=$(usex openexr ON OFF)
+ -DWITH_VALGRIND=$(usex valgrind ON OFF)
+ -DWITH_VIGRANUMPY=$(usex python ON OFF)
+ -DBUILD_TESTING=$(usex test ON OFF) # unused
+ -DUSE_AUTOBUILD_TESTS=$(usex test ON OFF) # unused
+ -DUSE_CREATE_CTEST_TARGETS=$(usex test ON OFF) # unused
+ )
+ cmake-utils_src_configure
+ }
+
+ if use python; then
+ python_foreach_impl vigra_configure
+ else
+ # required for docdir
+ _cmake_check_build_dir init
+ vigra_configure
+ fi
+}
+
+src_compile() {
+ local VIGRA_BUILD_DIR
+ vigra_compile() {
+ cmake-utils_src_compile
+ VIGRA_BUILD_DIR="${BUILD_DIR}"
+ }
+ if use python; then
+ python_foreach_impl vigra_compile
+ else
+ vigra_compile
+ fi
+
+ if use doc; then
+ einfo "Generating Documentation"
+ # use build dir from last compile command
+ VARTEXFONTS="${T}/fonts" BUILD_DIR="${VIGRA_BUILD_DIR}" cmake-utils_src_make doc
+ fi
+}
+
+src_install() {
+ if use python; then
+ python_foreach_impl cmake-utils_src_install
+ python_optimize
+ else
+ cmake-utils_src_install
+ fi
+}
+
+src_test() {
+ # perhaps disable tests (see #390447)
+ vigra_test() {
+ PYTHONPATH="${BUILD_DIR}/vigranumpy/vigra" cmake-utils_src_test
+ }
+ if use python; then
+ python_foreach_impl vigra_test
+ else
+ vigra_test
+ fi
+}
--- /dev/null
+# Copyright 1999-2018 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=6
+MY_P="${P}-src"
+MY_V="${PV//\./-}"
+PYTHON_COMPAT=( python2_7 )
+PYTHON_REQ_USE="threads,xml"
+
+inherit cmake-utils python-r1
+
+DESCRIPTION="C++ computer vision library emphasizing customizable algorithms and structures"
+HOMEPAGE="https://ukoethe.github.io/vigra/"
+
+if [[ ${PV} == *9999 ]] ; then
+ EGIT_REPO_URI="https://github.com/ukoethe/${PN}.git"
+ inherit git-r3
+else
+ SRC_URI="https://github.com/ukoethe/${PN}/releases/download/Version-${MY_V}/${MY_P}.tar.gz"
+ KEYWORDS="~amd64 ~sparc ~x86 ~amd64-linux ~x86-linux ~sparc-solaris ~x64-solaris ~x86-solaris"
+fi
+
+LICENSE="MIT"
+SLOT="0"
+IUSE="doc +fftw +hdf5 +jpeg mpi openexr +png +python test +tiff valgrind"
+
+# runtime dependency on python:2.7 is required by the vigra-config script
+RDEPEND="
+ dev-lang/python:2.7
+ >=dev-libs/boost-1.52.0-r6:=[python?,${PYTHON_USEDEP}]
+ fftw? ( sci-libs/fftw:3.0 )
+ hdf5? ( >=sci-libs/hdf5-1.8.0:=[mpi?] )
+ jpeg? ( virtual/jpeg:0 )
+ openexr? ( media-libs/openexr:= )
+ png? ( media-libs/libpng:0= )
+ python? ( ${PYTHON_DEPS} dev-python/numpy[${PYTHON_USEDEP}] )
+ tiff? ( media-libs/tiff:0= )
+ valgrind? ( dev-util/valgrind )"
+
+DEPEND="${RDEPEND}
+ doc? (
+ app-doc/doxygen
+ python? ( >=dev-python/sphinx-1.1.3-r5[${PYTHON_USEDEP}] )
+ )
+ test? ( >=dev-python/nose-1.1.2-r1[${PYTHON_USEDEP}] )"
+
+REQUIRED_USE="
+ doc? ( hdf5 fftw )
+ python? ( hdf5 ${PYTHON_REQUIRED_USE} )
+ test? ( hdf5 python fftw )"
+
+# Severely broken, also disabled in Fedora, bugs #390447, #653442
+RESTRICT="test"
+
+DOCS=( README.md )
+
+pkg_setup() {
+ use python && python_setup
+}
+
+src_prepare() {
+ einfo "Removing shipped docs and VCS files"
+ rm -rf doc || die
+
+ cmake-utils_src_prepare
+
+ # Don't use python_fix_shebang because we can't put this behind USE="python"
+ sed -i -e '/env/s:python:python2:' config/vigra-config.in || die
+}
+
+src_configure() {
+ vigra_configure() {
+ local libdir="$(get_libdir)"
+
+ local mycmakeargs=(
+ -DAUTOEXEC_TESTS=OFF
+ -DDOCDIR="${BUILD_DIR}/doc"
+ -DDOCINSTALL="share/doc/${P}"
+ -DLIBDIR_SUFFIX="${libdir/lib}"
+ -DUSE_DOC=$(usex doc ON OFF) # unused
+ -DUSE_FFTW3=$(usex fftw ON OFF) # unused
+ -DUSE_JPEG=$(usex jpeg ON OFF) # unused
+ -DUSE_MPI=$(usex mpi ON OFF) # unused
+ -DUSE_PNG=$(usex png ON OFF) # unused
+ -DUSE_TIFF=$(usex tiff ON OFF) # unused
+ -DWITH_HDF5=$(usex hdf5 ON OFF)
+ -DWITH_OPENEXR=$(usex openexr ON OFF)
+ -DWITH_VALGRIND=$(usex valgrind ON OFF)
+ -DWITH_VIGRANUMPY=$(usex python ON OFF)
+ -DBUILD_TESTING=$(usex test ON OFF) # unused
+ -DUSE_AUTOBUILD_TESTS=$(usex test ON OFF) # unused
+ -DUSE_CREATE_CTEST_TARGETS=$(usex test ON OFF) # unused
+ )
+ cmake-utils_src_configure
+ }
+
+ if use python; then
+ python_foreach_impl vigra_configure
+ else
+ # required for docdir
+ _cmake_check_build_dir init
+ vigra_configure
+ fi
+}
+
+src_compile() {
+ local VIGRA_BUILD_DIR
+ vigra_compile() {
+ cmake-utils_src_compile
+ VIGRA_BUILD_DIR="${BUILD_DIR}"
+ }
+ if use python; then
+ python_foreach_impl vigra_compile
+ else
+ vigra_compile
+ fi
+
+ if use doc; then
+ einfo "Generating Documentation"
+ # use build dir from last compile command
+ VARTEXFONTS="${T}/fonts" BUILD_DIR="${VIGRA_BUILD_DIR}" cmake-utils_src_make doc
+ fi
+}
+
+src_install() {
+ if use python; then
+ python_foreach_impl cmake-utils_src_install
+ python_optimize
+ else
+ cmake-utils_src_install
+ fi
+}
+
+src_test() {
+ # perhaps disable tests (see #390447)
+ vigra_test() {
+ PYTHONPATH="${BUILD_DIR}/vigranumpy/vigra" cmake-utils_src_test
+ }
+ if use python; then
+ python_foreach_impl vigra_test
+ else
+ vigra_test
+ fi
+}
projects / gentoo.git / commitdiff