Moving to sci-chemistry/babel

diff --git a/app-sci/babel/ChangeLog b/app-sci/babel/ChangeLog
deleted file mode 100644 (file)
index 88da9af..0000000
--- a/app-sci/babel/ChangeLog
+++ /dev/null
@@ -1,34 +0,0 @@
-# ChangeLog for app-sci/babel
-# Copyright 2002-2004 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/app-sci/babel/ChangeLog,v 1.10 2004/07/15 15:43:26 kugelfang Exp $
-
-  15 Jul 2004; Danny van Dyk <kugelfang@gentoo.org> babel-1.6.ebuild:
-  Marked ~amd64.
-
-  19 Apr 2004; Patrick Kursawe <phosphan@gentoo.org> babel-1.6.ebuild:
-  Adding IUSE
-
-  26 Mar 2004; Patrick Kursawe <phosphan@gentoo.org> babel-1.6.ebuild:
-  Adding "inherit eutils"
-
-  16 Dec 2003; Jason Wever <weeve@gentoo.org> babel-1.6.ebuild:
-  Added ~sparc keyword to fix broken dependencies in app-sci/xdrawchem.
-
-  24 Sep 2003; Patrick Kursawe <phosphan@gentoo.org> babel-1.6.ebuild:
-  removed old PROVIDE line, added blocker for openbabel.
-
-*babel-1.6 (1 Feb 2002)
-
-  15 Sep 2002; Owen Stampflee <owen@gentoo.org> :
-  Fixed a problem where GCC 3.2 fails to compile Babel on PPC.
-
-  25 Jul 2002; Daniel Ahlberg <aliz@gentoo.org> babel-1.6.ebuild :
-  Added LICENSE, KEYWORDS, SLOT.
-
-  1 Feb 2002; G.Bevin <gbevin@gentoo.org> ChangeLog :
-  
-  Added initial ChangeLog which should be updated whenever the package is
-  updated in any way. This changelog is targetted to users. This means that the
-  comments should well explained and written in clean English. The details about
-  writing correct changelogs are explained in the skel.ChangeLog file which you
-  can find in the root directory of the portage repository.

diff --git a/app-sci/babel/Manifest b/app-sci/babel/Manifest
deleted file mode 100644 (file)
index 254b258..0000000
--- a/app-sci/babel/Manifest
+++ /dev/null
@@ -1,7 +0,0 @@
-MD5 eb76b9e0f837f183cf1ee85e85c77d12 ChangeLog 1413
-MD5 6c13969bd42cefc326c54db1d94f4541 babel-1.6.ebuild 928
-MD5 8c623e53daafa025137077c6b65815bd metadata.xml 156
-MD5 89cff2c8f6593871433dc050f452fb55 files/10babel 27
-MD5 444ffe6f4986e1fb199a0f2a31cccd7d files/babel-1.6-gcc32.diff 549
-MD5 80848d0c7c776240d8295eadb1593a8e files/babel-1.6-gentoo.diff 569
-MD5 45d9ad9dceace9db87c213339d35e10d files/digest-babel-1.6 60

diff --git a/app-sci/babel/babel-1.6.ebuild b/app-sci/babel/babel-1.6.ebuild
deleted file mode 100644 (file)
index 69a1ab0..0000000
--- a/app-sci/babel/babel-1.6.ebuild
+++ /dev/null
@@ -1,49 +0,0 @@
-# Copyright 1999-2004 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/app-sci/babel/babel-1.6.ebuild,v 1.17 2004/07/15 15:43:26 kugelfang Exp $
-
-inherit eutils
-
-DESCRIPTION="Babel is a program to interconvert file formats used in molecular modeling."
-
-SRC_URI="http://smog.com/chem/babel/files/${P}.tar.Z"
-
-HOMEPAGE="http://smog.com/chem/babel/"
-KEYWORDS="x86 ppc sparc ~amd64"
-SLOT="0"
-LICENSE="as-is"
-IUSE=""
-
-#Doesn't really seem to depend on anything (?)
-DEPEND="!app-sci/openbabel"
-
-src_unpack() {
-
-       unpack ${P}.tar.Z
-       cd ${S}
-#Patch the Makefile for gentoo-isms
-       epatch ${FILESDIR}/${P}-gentoo.diff
-       epatch ${FILESDIR}/${P}-gcc32.diff
-
-}
-
-src_compile() {
-
-       emake || die
-
-}
-
-src_install () {
-
-       make DESTDIR=${D}/usr/bin install || die
-
-       insinto /usr/share/${PN}
-       doins ${S}/*.lis
-
-       insinto /etc/env.d
-       doins ${FILESDIR}/10babel
-
-       dodoc README.1ST
-
-}
-

diff --git a/app-sci/babel/files/10babel b/app-sci/babel/files/10babel
deleted file mode 100644 (file)
index 69f3397..0000000
--- a/app-sci/babel/files/10babel
+++ /dev/null
@@ -1 +0,0 @@
-BABEL_DIR=/usr/share/babel

diff --git a/app-sci/babel/files/babel-1.6-gcc32.diff b/app-sci/babel/files/babel-1.6-gcc32.diff
deleted file mode 100644 (file)
index ba0964a..0000000
--- a/app-sci/babel/files/babel-1.6-gcc32.diff
+++ /dev/null
@@ -1,28 +0,0 @@
---- block.c.orig       Sun Sep 15 04:51:13 2002
-+++ block.c    Sun Sep 15 04:58:04 2002
-@@ -99,7 +99,12 @@
-    void *array;
- 
- /* calc how much space we are gonna need */
-+#ifdef __va_copy
-+   __va_copy (ap, initap);
-+#else
-    ap = initap;
-+#endif
-+
-    size = 0;
-    for(i=0; types[i] != '\0'; i++)
-    {
-@@ -116,7 +121,12 @@
- /* set up the ptrs if we can alloc the memory */
-    if(*handle != NULL)
-    {
-+#ifdef __va_copy
-+      __va_copy (ap, initap);
-+#else
-       ap = initap;
-+#endif
-+
-       ptr = 0;
-       for(i=0; types[i] != '\0'; i++)
-       {

diff --git a/app-sci/babel/files/babel-1.6-gentoo.diff b/app-sci/babel/files/babel-1.6-gentoo.diff
deleted file mode 100644 (file)
index 77e2cb4..0000000
--- a/app-sci/babel/files/babel-1.6-gentoo.diff
+++ /dev/null
@@ -1,28 +0,0 @@
---- Makefile.orig      Tue Oct 23 00:20:54 2001
-+++ Makefile   Tue Oct 23 00:33:36 2001
-@@ -1,11 +1,15 @@
--CFLAGS        = -O 
-+#Commented out to pull CFLAGS from make.conf
-+#CFLAGS        = -O 
- 
- LIBFLAGS      = -O -DLIBRARY 
- 
--CC          = cc
-+#Probably not necessary to specify gcc
-+CC          = gcc
- 
- PROGRAM             = babel
- 
-+DEST          = ${DESTDIR}/$(PROGRAM)
-+
- LDFLAGS             =
- 
- LIBS        =
-@@ -334,6 +338,7 @@
- index:;               ctags -wx $(HDRS) $(SRCS)
- 
- install:      $(PROGRAM)
-+              install -d ${DESTDIR}
-               install -s $(PROGRAM) $(DEST)
- 
- print:;               $(PRINT) $(HDRS) $(SRCS)

diff --git a/app-sci/babel/files/digest-babel-1.6 b/app-sci/babel/files/digest-babel-1.6
deleted file mode 100644 (file)
index 118db2b..0000000
--- a/app-sci/babel/files/digest-babel-1.6
+++ /dev/null
@@ -1 +0,0 @@
-MD5 101a5dc4858ecacac123571db52b272e babel-1.6.tar.Z 242341

diff --git a/app-sci/babel/metadata.xml b/app-sci/babel/metadata.xml
deleted file mode 100644 (file)
index b229aec..0000000
--- a/app-sci/babel/metadata.xml
+++ /dev/null
@@ -1,5 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
-<pkgmetadata>
-<herd>sci</herd>
-</pkgmetadata>

diff --git a/app-sci/openbabel/Manifest b/app-sci/openbabel/Manifest
index 42f0061f99272d2b46d1274b3aaaebb404c5ce46..7ee3aab1cef9cedf1d2e75876e9d3c6509c0a93a 100644 (file)
--- a/app-sci/openbabel/Manifest
+++ b/app-sci/openbabel/Manifest
@@ -1,4 +1,4 @@
-MD5 67ae44414354844fff2d75ae455b901a openbabel-1.100.2.ebuild 848
+MD5 ce0f7259a2782ab85bc8420f54fefc98 openbabel-1.100.2.ebuild 854
 MD5 01107a848c187e498114560b97890298 ChangeLog 1133
 MD5 8c623e53daafa025137077c6b65815bd metadata.xml 156
 MD5 fb703018955c2ecf55e0ab8971b399df files/digest-openbabel-1.100.2 70