Moved from app-sci/njplot-unrooted to sci-biology/njplot-unrooted.

diff --git a/sci-biology/njplot-unrooted/ChangeLog b/sci-biology/njplot-unrooted/ChangeLog
new file mode 100644 (file)
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--- /dev/null
+++ b/sci-biology/njplot-unrooted/ChangeLog
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+# ChangeLog for app-sci/njplot-unrooted
+# Copyright 1999-2004 Gentoo Foundation; Distributed under the GPL v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/njplot-unrooted/ChangeLog,v 1.1 2004/12/23 21:32:58 ribosome Exp $
+
+*njplot-unrooted-1 (23 Dec 2004)
+
+  23 Dec 2004; Olivier Fisette <ribosome@gentoo.org> +metadata.xml,
+  +njplot-unrooted-1.ebuild:
+  Moved from app-sci/njplot-unrooted to sci-biology/njplot-unrooted.
+
+*njplot-unrooted-1 (06 Oct 2004)
+
+  06 Oct 2004; Olivier Fisette <ribosome@gentoo.org> +metadata.xml,
+  +njplot-unrooted-1.ebuild:
+  Initial import.
+

diff --git a/sci-biology/njplot-unrooted/Manifest b/sci-biology/njplot-unrooted/Manifest
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+++ b/sci-biology/njplot-unrooted/Manifest
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+MD5 e008ff5fb2cd09c2b556bc15d87bd11f njplot-unrooted-1.ebuild 806
+MD5 ea36700cc487ee7217bda9b7d72925d1 ChangeLog 371
+MD5 a1727bd238aff0cb1debdf9b11b21b5e metadata.xml 609
+MD5 72fe56f3a4074cf7324d469c568a242a files/digest-njplot-unrooted-1 69

diff --git a/sci-biology/njplot-unrooted/files/digest-njplot-unrooted-1 b/sci-biology/njplot-unrooted/files/digest-njplot-unrooted-1
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+++ b/sci-biology/njplot-unrooted/files/digest-njplot-unrooted-1
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+MD5 bd8228dbc78ab5858154063517d4b6e1 njplot-unrooted-1.tar.bz2 34352

diff --git a/sci-biology/njplot-unrooted/metadata.xml b/sci-biology/njplot-unrooted/metadata.xml
new file mode 100644 (file)
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+++ b/sci-biology/njplot-unrooted/metadata.xml
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+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<pkgmetadata>
+       <maintainer>
+               <email>ribosome@gentoo.org</email>
+               <name>Olivier Fisette</name>
+       </maintainer>
+       <herd>sci</herd>
+       <longdescription>
+               NJplot is a tree drawing program able to draw any phylogenetic tree
+               expressed in the Newick phylogenetic tree format (e.g., the format used
+               by the PHYLIP package). NJplot is especially convenient for rooting the
+               unrooted trees obtained from parsimony, distance or maximum likelihood
+               tree-building methods.
+       </longdescription>
+</pkgmetadata>

diff --git a/sci-biology/njplot-unrooted/njplot-unrooted-1.ebuild b/sci-biology/njplot-unrooted/njplot-unrooted-1.ebuild
new file mode 100644 (file)
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+++ b/sci-biology/njplot-unrooted/njplot-unrooted-1.ebuild
@@ -0,0 +1,35 @@
+# Copyright 1999-2004 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/njplot-unrooted/njplot-unrooted-1.ebuild,v 1.1 2004/12/23 21:32:58 ribosome Exp $
+
+DESCRIPTION="A phylogenetic tree drawing program which supports tree rooting"
+HOMEPAGE="http://pbil.univ-lyon1.fr/software/njplot.html"
+SRC_URI="mirror://gentoo/${P}.tar.bz2"
+LICENSE="public-domain"
+
+SLOT="0"
+KEYWORDS="~x86"
+IUSE=""
+
+DEPEND="sci-biology/ncbi-tools
+       virtual/x11"
+
+src_unpack() {
+       unpack ${A}
+       cd ${S}
+       sed -i -e "s%njplot.help%/usr/share/doc/${PF}/njplot.help%" njplot-vib.c
+}
+
+src_compile() {
+       make -e || die
+}
+
+src_install() {
+       dobin newicktops njplot unrooted
+
+       insinto /usr/share/doc/${PF}
+       doins njplot.help
+
+       insinto /usr/share/${PN}
+       doins test.ph
+}