Enable --with-mt

Package-Manager: portage-2.2_rc67/cvs/Linux x86_64

diff --git a/sci-biology/ncbi-tools++/ChangeLog b/sci-biology/ncbi-tools++/ChangeLog
index 6cd573fff28d6b8b63a3fb35c4724da9221acf35..3b5159c1448e52d6e44f7f6502b413debb31e384 100644 (file)
--- a/sci-biology/ncbi-tools++/ChangeLog
+++ b/sci-biology/ncbi-tools++/ChangeLog
@@ -1,6 +1,12 @@
 # ChangeLog for sci-biology/ncbi-tools++
 # Copyright 1999-2010 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/ncbi-tools++/ChangeLog,v 1.11 2010/03/07 09:19:05 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/ncbi-tools++/ChangeLog,v 1.12 2010/03/11 20:49:57 weaver Exp $
+
+*ncbi-tools++-2009.05.15-r3 (11 Mar 2010)
+
+  11 Mar 2010; Andrey Kislyuk <weaver@gentoo.org>
+  -ncbi-tools++-2009.05.15-r2.ebuild, +ncbi-tools++-2009.05.15-r3.ebuild:
+  Enable --with-mt
 
   07 Mar 2010; Justin Lecher (jlec) <jlec@gentoo.org>
   ncbi-tools++-2009.05.15-r2.ebuild:

diff --git a/sci-biology/ncbi-tools++/Manifest b/sci-biology/ncbi-tools++/Manifest
index 1d24040a605e07294ee8ef537aee85b271aa517e..a6d6431404ced34033d2960d9e5d05583243ed89 100644 (file)
--- a/sci-biology/ncbi-tools++/Manifest
+++ b/sci-biology/ncbi-tools++/Manifest
@@ -1,15 +1,5 @@
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-Hash: SHA1
-
 AUX ncbi-tools++-2009.05.15-gcc44.patch 554 RMD160 57a23cbaad59b6011124f684db55f4ac2e4a43ab SHA1 7ed63addba554bf87a347d25ea2d4ea6b6552a1a SHA256 ddc2379ff636851e1bb4fb601930ee926c396819e06812b1ba76da001255d5c6
 DIST ncbi_cxx--May_15_2009.tar.gz 13986626 RMD160 131a04d43056fd4d4fd1781d38a5c1b9e3089a13 SHA1 0cecad93774ce40b3455149b2c3538dfce032b85 SHA256 ccb86f2e33251580e23c94b8d2a4aa4832c278171ded29513f0c9859b303f1d8
-EBUILD ncbi-tools++-2009.05.15-r2.ebuild 2623 RMD160 edf7c83b549e97c0fd33e9f27d95ec53ba0f5712 SHA1 3209b135cb6cc2e249b3e915eb750a45c4eec54b SHA256 fae656baaaeac39e25ed7ab5420e34ef1a4b7fd948ba7fa969abdeffdb0d416d
-MISC ChangeLog 2134 RMD160 f3171f61cfc2818c8a4499b050fdcdbced7a6804 SHA1 b3c79f632d36a37bed946d07f00a7388e47816cb SHA256 947d55e2da14d5ee61071ddcc3bcba930fd4dfdd6573af62f5e53a71851d4320
+EBUILD ncbi-tools++-2009.05.15-r3.ebuild 2692 RMD160 8b337c986551dc52d2cdfd6c630d87e4ddce72a3 SHA1 38caea9979ef082608b3c24ed173bda2276c0b4a SHA256 0751f47af667e46eccde2c7bfee91e0ee669d54c81b174eb602388031549ea73
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 MISC metadata.xml 259 RMD160 d9d81b67d635fabd81aef8ae0edf971211ae9072 SHA1 8e32f751c67ff891fa35405a2cf6fb33752d6eb1 SHA256 541c3fbcf299d9a8ccf4132ee61f9e53a5d737cefdaa6fdc77764d8d4c7f3110
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diff --git a/sci-biology/ncbi-tools++/ncbi-tools++-2009.05.15-r2.ebuild b/sci-biology/ncbi-tools++/ncbi-tools++-2009.05.15-r3.ebuild
similarity index 93%
rename from sci-biology/ncbi-tools++/ncbi-tools++-2009.05.15-r2.ebuild
rename to sci-biology/ncbi-tools++/ncbi-tools++-2009.05.15-r3.ebuild
index 61c7a3b5ede16cae6a1f5b32908d6c57fb7e31a9..3af93c79214816e2b41d9e7c55a622738149a6f0 100644 (file)
--- a/sci-biology/ncbi-tools++/ncbi-tools++-2009.05.15-r2.ebuild
+++ b/sci-biology/ncbi-tools++/ncbi-tools++-2009.05.15-r3.ebuild
@@ -1,6 +1,6 @@
 # Copyright 1999-2010 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/ncbi-tools++/ncbi-tools++-2009.05.15-r2.ebuild,v 1.2 2010/03/07 09:19:05 jlec Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/ncbi-tools++/ncbi-tools++-2009.05.15-r3.ebuild,v 1.1 2010/03/11 20:49:57 weaver Exp $
 
 EAPI="3"
 
@@ -52,6 +52,9 @@ src_prepare() {
 }
 
 src_configure() {
+       # required with gcc-4.4 and code turned on by --with-mt
+       export CPPFLAGS="${CPPFLAGS} -fpermissive"
+
        # econf fails
        # --with-bin-release and --without-ftds are workarounds for build system bugs
        # NB: build system supports ICC
@@ -66,10 +69,9 @@ src_configure() {
                --with-bz2="${EPREFIX}/usr" \
                --with-pcre="${EPREFIX}/usr" \
                --with-openssl="${EPREFIX}/usr" \
+               --with-mt \
                || die
 
-#              --with-mt \ # fails with gcc-4.4 but not 4.3
-
 # apparently gbench-only configs
 #              --with-boost="/usr" \
 #              --with-sablot="/usr" \