Version bump

Package-Manager: portage-2.2.0_alpha74/cvs/Linux x86_64

diff --git a/sci-biology/bedtools/ChangeLog b/sci-biology/bedtools/ChangeLog
index dbf5b6263ac988ac888902c6ca339a3ce692ef08..a6c655ef86dda0a924637a197405c5a2c8d1c8c0 100644 (file)
--- a/sci-biology/bedtools/ChangeLog
+++ b/sci-biology/bedtools/ChangeLog
@@ -1,6 +1,11 @@
 # ChangeLog for sci-biology/bedtools
-# Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/bedtools/ChangeLog,v 1.1 2011/10/09 04:01:53 weaver Exp $
+# Copyright 1999-2012 Gentoo Foundation; Distributed under the GPL v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/bedtools/ChangeLog,v 1.2 2012/01/02 22:13:24 weaver Exp $
+
+*bedtools-2.15.0 (02 Jan 2012)
+
+  02 Jan 2012; Andrey Kislyuk <weaver@gentoo.org> +bedtools-2.15.0.ebuild:
+  Version bump
 
 *bedtools-2.13.3 (09 Oct 2011)
 

diff --git a/sci-biology/bedtools/Manifest b/sci-biology/bedtools/Manifest
index 4d35840a878398b2b1ddcc09aba4a45f00409c1f..a399494574a98c37376b30413369dc5234539de9 100644 (file)
--- a/sci-biology/bedtools/Manifest
+++ b/sci-biology/bedtools/Manifest
@@ -2,13 +2,15 @@
 Hash: SHA1
 
 DIST BEDTools.v2.13.3.tar.gz 928205 RMD160 2d4da4fc9f15ac9ba16e733349232822b87a09a9 SHA1 bcd52ba59908c1f98d0c84f4d3fb2e1efb0636d0 SHA256 9c3ec91dfe276005016e002badabf9fa2e12218ed5dbdb30679b5120ed330bbc
+DIST BEDTools.v2.15.0.tar.gz 962861 RMD160 2911734ff86ed72766a97c8a8642f5a87333ba3f SHA1 ca0aa595809f56c3fb5752de32d7ceb87ea844de SHA256 2e6f20435ad403fdf0c9d4d8f160b7eb2491d5213935178c25d6ab222a45c505
 EBUILD bedtools-2.13.3.ebuild 820 RMD160 ee781c0550d4b881bfb4dbdd5154f434076a7379 SHA1 638f696da7369a8f2879edd3d71cb7ba3f0905fc SHA256 b4aa425340ee26d55915ae00b975b0462156a7d8b9446c29418ed1b84adfbc01
-MISC ChangeLog 475 RMD160 7222f0882455a6e09651619a40d60438170a8796 SHA1 7164e706ce82e0c9e7efc61b20e23464b6ba0541 SHA256 0d780fa3070ab58cf2c2244ad90298aa79b61efed7abefe1610e594ad0c49fc2
+EBUILD bedtools-2.15.0.ebuild 804 RMD160 f663ae7abe672755467186f78567ba7f31f9ce42 SHA1 938ed6a459d5bd0ecba8c58a21448c763d262fd1 SHA256 a4b4184816e7e7e4561f9787f6f073138ac7857a55135349902733f7cd62f464
+MISC ChangeLog 598 RMD160 6ebeeb8770d9079f9037b0c40890fc312a3b3d7b SHA1 8fc3346f4845a79674a8d7b539055bb7ed7d00f6 SHA256 c90bbbdf10dba85e21b0cbe96809bd9b17fc95899123a3583f7b29f3d12e56d1
 MISC metadata.xml 471 RMD160 b3da36bc88c543e8e7589238dc39ea30a0cba58e SHA1 2b966e33142eb4491a33fb385cb70e230884398c SHA256 b845453d89e580a9ef80ba745d64cba010dbba50021aaf6f44bcbf5f28512fa0
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diff --git a/sci-biology/bedtools/bedtools-2.15.0.ebuild b/sci-biology/bedtools/bedtools-2.15.0.ebuild
new file mode 100644 (file)
index 0000000..69f825c
--- /dev/null
+++ b/sci-biology/bedtools/bedtools-2.15.0.ebuild
@@ -0,0 +1,33 @@
+# Copyright 1999-2012 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/sci-biology/bedtools/bedtools-2.15.0.ebuild,v 1.1 2012/01/02 22:13:24 weaver Exp $
+
+EAPI=4
+
+inherit flag-o-matic
+
+DESCRIPTION="Tools for manipulation and analysis of BED, GFF/GTF, VCF, and SAM/BAM file formats"
+HOMEPAGE="http://code.google.com/p/bedtools/"
+SRC_URI="http://bedtools.googlecode.com/files/BEDTools.v${PV}.tar.gz"
+
+LICENSE="GPL-2"
+SLOT="0"
+KEYWORDS="~x86 ~amd64"
+IUSE=""
+
+S="${WORKDIR}/BEDTools-Version-${PV}"
+
+src_prepare() {
+       filter-ldflags -Wl,--as-needed
+       sed -i \
+               -e '/export CXXFLAGS/ d' \
+               -e '/export CXX/ d' \
+               Makefile || die
+}
+
+src_install() {
+       dobin bin/*
+       dodoc README* RELEASE_HISTORY
+       insinto /usr/share/${PN}
+       doins -r genomes
+}