# ChangeLog for sci-chemistry/namd
# Copyright 1999-2010 Gentoo Foundation; Distributed under the GPL v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/namd/ChangeLog,v 1.11 2010/04/24 00:02:02 dberkholz Exp $
+# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/namd/ChangeLog,v 1.12 2010/06/24 20:06:06 jlec Exp $
+
+ 24 Jun 2010; Justin Lecher <jlec@gentoo.org> -namd-2.7_beta1.ebuild:
+ Removed unneeded
*namd-2.7_beta2 (24 Apr 2010)
*namd-2.7_beta1 (24 Apr 2010)
AUX namd-makefile-gentoo.patch 2804 RMD160 e52934e5a1aa7ed34e270dc11e780b1bdef3011d SHA1 22d5bd779a280c1287c936dd855f8359fa7b1b4e SHA256 f3945ae8fff113286847d61a00d5a749b1c3a00b65394085e56ff47a0a209250
AUX namd-tcl-lib-gentoo.patch 576 RMD160 0992dd4103b97baed85e66a8d4fc04c3991bedd1 SHA1 f1cc944b14f7f77785f1a914d3d50f44d9929aec SHA256 7a57497410f5791b1b9fa0535e66137bd1b4c5008e0253c7467bc40af7b6ac01
DIST NAMD_2.6_Source.tar.gz 8963319 RMD160 186f79322226a20398031618011104a666237298 SHA1 3b3d83fdc54a520cb6c59b34cde03c9f74d2f443 SHA256 bf353ff13eae18b5a8dc33d79d295e9fe73fb87482858309b7695ce3e24f0d0b
-DIST NAMD_2.7b1_Source.tar.gz 26302404 RMD160 ccb73606d3f0724c55ce022aa130656444825f5e SHA1 955e096a6c70e1e7786d10334bec3cae1eb4fff6 SHA256 cf48b659667fe9e03af27c8d434567525e924ebd08c801321c71361a8f166b2e
DIST NAMD_2.7b2_Source.tar.gz 9094631 RMD160 ec2c46f6cdb582dca73ebdbd894a9827f2e276d9 SHA1 0acab2a3bb6fca67b767f02bf7d2d2045ce6c3b9 SHA256 5675eb08534a6e4ea7a59e52e949991b3ba42abd78b45a46976ac3d7ed3b8d67
EBUILD namd-2.6.ebuild 2263 RMD160 f846abf600169a6542e7a577724a8827b91fc515 SHA1 504275ea6effca39d3381409f4a9da52d907db31 SHA256 dc4868ffea8c831981080d501efd4dc18f03304cc5971cd4f1ece76a4f4b876e
-EBUILD namd-2.7_beta1.ebuild 2658 RMD160 c928b75a108e1e3b590c840e4f5afb8a791df147 SHA1 d37b46c9100b1e0dec2c03ecfab9cbfce0883f13 SHA256 34a7a205c621fad15d0c97099128386fa29cc96e40a928d38df35f82df2d8751
EBUILD namd-2.7_beta2.ebuild 2830 RMD160 e477f73c4687e6f7b034b696eb55116fa7179a71 SHA1 80ec984ef5e69af7de7ebd47380e51b4a82791df SHA256 31306db2ebf653bbbaa3bf1efd6d5d11ab6c80e2dcdfef8a469623ca6e2d2f1c
-MISC ChangeLog 2478 RMD160 31bbe13dc16f9205d6279ab419daf610cb7493aa SHA1 e9d8d08529c52e9fed85bb450c755f615df7bfc6 SHA256 211fc82e963551e1956b8e47b9146f290592d699090a1938f193c1d3e9535b36
+MISC ChangeLog 2564 RMD160 b9a051e565aa174040b34b13af21c0704fba8c05 SHA1 5bda2952debd007c0da71afc87dda21971035457 SHA256 8744689ca0d602a59f9554b51cfc9f8d6ec65456043c92c62e0daf7b0154770f
MISC metadata.xml 282 RMD160 539a53475b01291eadb86c8c53a0fbc02b4a34d4 SHA1 7f42dcea44641b8a77ab9644791344ec6ed6c327 SHA256 3c1785eb4ab63774ed3a6b1bddd602ef24cd6795f690bb3289d5a980bca06349
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+++ /dev/null
-# Copyright 1999-2010 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/namd/namd-2.7_beta1.ebuild,v 1.1 2010/04/24 00:02:02 dberkholz Exp $
-
-inherit eutils toolchain-funcs flag-o-matic
-
-DESCRIPTION="A powerful and highly parallelized molecular dynamics code"
-LICENSE="namd"
-HOMEPAGE="http://www.ks.uiuc.edu/Research/namd/"
-
-MY_PN="NAMD"
-MY_PV="2.7b1"
-
-SRC_URI="${MY_PN}_${MY_PV}_Source.tar.gz"
-
-SLOT="0"
-KEYWORDS="~amd64"
-IUSE=""
-
-RESTRICT="fetch"
-
-DEPEND="|| ( app-shells/csh
- app-shells/tcsh )
- sys-cluster/charm
- =sci-libs/fftw-2*
- dev-lang/tcl"
-
-RDEPEND=${DEPEND}
-
-NAMD_ARCH="Linux-x86_64-g++"
-
-NAMD_DOWNLOAD="http://www.ks.uiuc.edu/Development/Download/download.cgi?PackageName=NAMD"
-
-S="${WORKDIR}/${MY_PN}_${MY_PV}_Source"
-
-pkg_nofetch() {
- echo
- einfo "Please download ${MY_PN}_${MY_PV}_Source.tar.gz from"
- einfo "${NAMD_DOWNLOAD}"
- einfo "after agreeing to the license and then move it to"
- einfo "${DISTDIR}"
- einfo "Be sure to select the ${MY_PV} version!"
- echo
-}
-
-src_unpack() {
- unpack ${A}
- cd "${WORKDIR}"
-# apply a few small fixes to make NAMD compile and
- # link to the proper libraries
- epatch "${FILESDIR}"/namd-2.7-gentoo.patch
- cd "${S}"
- # proper compiler and cflags
- sed -e "s/g++/$(tc-getCXX)/" \
- -e "s/gcc/$(tc-getCC)/" \
- -e "s/CXXOPTS = -O3 -m64 -fexpensive-optimizations -ffast-math/CXXOPTS = ${CXXFLAGS}/" \
- -e "s/COPTS = -O3 -m64 -fexpensive-optimizations -ffast-math/COPTS = ${CFLAGS}/" \
- -i arch/${NAMD_ARCH}.arch || \
- die "Failed to setup ${NAMD_ARCH}.arch"
-
- sed -e "s/gentoo-libdir/$(get_libdir)/g" \
- -e "s/gentoo-charm/charm-6.1.2/g" \
- -i Makefile || die "Failed gentooizing Makefile."
- sed -e "s/gentoo-libdir/$(get_libdir)/g" -i arch/Linux-x86_64.fftw || \
- die "Failed gentooizing Linux-x86_64.fftw."
- sed -e "s/gentoo-libdir/$(get_libdir)/g" -i arch/Linux-x86_64.tcl || \
- die "Failed gentooizing Linux-x86_64.tcl."
-
- # configure
- ./config ${NAMD_ARCH}
-}
-
-src_compile() {
- # build namd
- cd "${S}/${NAMD_ARCH}"
- emake || die "Failed to build namd"
-}
-
-src_install() {
- cd "${S}/${NAMD_ARCH}"
-
- # the binaries
- dobin ${PN}2 psfgen flipbinpdb flipdcd || \
- die "Failed to install binaries"
-
- cd "${S}"
-
- # some docs
- dodoc announce.txt license.txt notes.txt || \
- die "Failed to install docs"
-}
-
-pkg_postinst() {
- echo
- einfo "For detailed instructions on how to run and configure"
- einfo "NAMD please consults the extensive documentation at"
- einfo "http://www.ks.uiuc.edu/Research/namd/"
- einfo "and the NAMD tutorials available at"
- einfo "http://www.ks.uiuc.edu/Training/Tutorials/"
- einfo "Have fun :)"
- echo
-}
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